Psyllid ID: psy14961

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQDR
Secondary Structure (PSIPRED)
cEEEEcccccEEEEEEcccccEEEEEEcccccEEEEccccccEEEcccccccccccEEEEcccccccEEEEEEcccccEEEEccccccEEEEEccccEEEEEEEcccccEEEEEEcccccccEEEEccccccEEEEEccccEEEEEEccccccccccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEccccccccEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
EEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEcccccccccccEEEccccccEEEEEEEEcccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccccEEEEcccccEEEEEEcccccEEEEEcccccccccccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccEcEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEHHHcccccEEEEccccccEEEEcccccEEEEEcccccEEEEEcccccccEEEEEEccccc
Coil and Loop (DISEMBL)
miiwdgltqtkehsvtmpATWVMAcayapsgsvvasggldnkVTVYAIALeddssakkktVATHTSFisccifpnsdqqiltgsgdctcalwDVESSQLLQSFhghtgelmdldlapsetgntfvsgssdklvniwdmrtgycvqsfeghhnlitddklvniwdmrtgycvqsfeghqsdvnsvkfhpsgdavatgsddatcrLFDLRADKevacykkdsilfgatsvdfsvsGRLLFAGYNDYTINVWdslkccrvnhlmghenrvsclqvspdgtafssgswdttlrdeesKNRYVQYLLRSritkptqgltVYFQDR
Flexible Loop (DISEMBL)
miiwdgltqtkehsVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIAleddssakKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSsgswdttlrdeeskNRYVQYllrsritkptqgltvyfqdr
Low Complexity Region (SEG)
MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQDR
Disordered region (IsUnstruct)
**IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLA****GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH****AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF****W**********NRYVQYLLRSRITKPTQGLTVYF***
Disordered Region (DISOPRED)
MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQ**
Disordered Region (DISEMBL)
MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD**********HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQDR
Disordered Region (DISPRO)
MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYF***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQDR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
Q5RDY7	353	Guanine nucleotide-bindin	yes	N/A	0.818	0.742	0.639	1e-104
O14775	395	Guanine nucleotide-bindin	yes	N/A	0.818	0.663	0.639	1e-104
Q6PNB6	353	Guanine nucleotide-bindin	yes	N/A	0.818	0.742	0.639	1e-104
P62882	353	Guanine nucleotide-bindin	yes	N/A	0.818	0.742	0.642	1e-104
P62881	395	Guanine nucleotide-bindin	no	N/A	0.818	0.663	0.642	1e-104
Q80ZD0	353	Guanine nucleotide-bindin	N/A	N/A	0.818	0.742	0.639	1e-104
Q20636	356	Guanine nucleotide-bindin	yes	N/A	0.818	0.735	0.574	2e-97
P17343	340	Guanine nucleotide-bindin	no	N/A	0.809	0.761	0.480	1e-74
Q61ZF6	340	Guanine nucleotide-bindin	N/A	N/A	0.809	0.761	0.480	1e-74
Q6PH57	340	Guanine nucleotide-bindin	no	N/A	0.809	0.761	0.480	8e-74

>sp|Q5RDY7|GBB5_PONAB Guanine nucleotide-binding protein subunit beta-5 OS=Pongo abelii GN=GNB5 PE=2 SV=1

 Score =  379 bits (972), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/291 (63%), Positives = 220/291 (75%), Gaps = 29/291 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 87  VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CV                           Q+FE H+
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCV---------------------------QAFETHE 239

Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SD+NSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 240 SDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 299

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 300 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 350

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
Pongo abelii (taxid: 9601)

>sp|O14775|GBB5_HUMAN Guanine nucleotide-binding protein subunit beta-5 OS=Homo sapiens GN=GNB5 PE=1 SV=2

 Score =  379 bits (972), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/291 (63%), Positives = 220/291 (75%), Gaps = 29/291 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 129 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 188

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CVQ                           +FE H+
Sbjct: 249 ETGNTFVSGGCDKKAMVWDMRSGQCVQ---------------------------AFETHE 281

Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SD+NSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 282 SDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 341

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 342 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 392

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Homo sapiens (taxid: 9606)

>sp|Q6PNB6|GBB5_RABIT Guanine nucleotide-binding protein subunit beta-5 OS=Oryctolagus cuniculus GN=GNB5 PE=2 SV=1

 Score =  379 bits (972), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/291 (63%), Positives = 220/291 (75%), Gaps = 29/291 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 87  VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CV                           Q+FE H+
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCV---------------------------QAFETHE 239

Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SD+NSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 240 SDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 299

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 300 AGYNDYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 350

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Oryctolagus cuniculus (taxid: 9986)

>sp|P62882|GBB5_RAT Guanine nucleotide-binding protein subunit beta-5 OS=Rattus norvegicus GN=Gnb5 PE=2 SV=1

 Score =  379 bits (972), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/291 (64%), Positives = 220/291 (75%), Gaps = 29/291 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 87  VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CV                           Q+FE H+
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCV---------------------------QAFETHE 239

Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SDVNSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 240 SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 299

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 300 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 350

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Rattus norvegicus (taxid: 10116)

>sp|P62881|GBB5_MOUSE Guanine nucleotide-binding protein subunit beta-5 OS=Mus musculus GN=Gnb5 PE=1 SV=1

 Score =  378 bits (971), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/291 (64%), Positives = 220/291 (75%), Gaps = 29/291 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 129 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 188

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CV                           Q+FE H+
Sbjct: 249 ETGNTFVSGGCDKKAMVWDMRSGQCV---------------------------QAFETHE 281

Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SDVNSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 282 SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 341

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 342 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 392

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Mus musculus (taxid: 10090)

>sp|Q80ZD0|GBB5_TAMST Guanine nucleotide-binding protein subunit beta-5 OS=Tamias striatus GN=GNB5 PE=2 SV=1

 Score =  378 bits (971), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/291 (63%), Positives = 220/291 (75%), Gaps = 29/291 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 87  VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CV                           Q+FE H+
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCV---------------------------QAFETHE 239

Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SD+NSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 240 SDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 299

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 300 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 350

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Tamias striatus (taxid: 45474)

>sp|Q20636|GBB2_CAEEL Guanine nucleotide-binding protein subunit beta-2 OS=Caenorhabditis elegans GN=gpb-2 PE=1 SV=2

 Score =  355 bits (912), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 166/289 (57%), Positives = 210/289 (72%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +I+WDG T  KEH++TMP TWVMACA++PS  ++A GGLDNK +V  ++ EDD   KK+ 
Sbjct: 92  VIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQ 151

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           VATHTS++SCC F  SD  ILTGSGD TCA+WDVES QL+Q+FHGHTG++  +D+   +T
Sbjct: 152 VATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDT 211

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTF+S  +DK   +WD+R+G CVQS                           FEGH++D
Sbjct: 212 GNTFISAGADKHSLVWDIRSGQCVQS---------------------------FEGHEAD 244

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N+V+FHP+GDA ATGSDDATCRLFDLRAD++V  Y+K+SILF    VDFS+SGR+LFAG
Sbjct: 245 INTVRFHPNGDAFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAG 304

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y DY + VWDSLKC R + L GHENR+SCL+ SPDGTA  S SWD T+R
Sbjct: 305 YGDYRVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAVCSASWDCTIR 353

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Caenorhabditis elegans (taxid: 6239)

>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis elegans GN=gpb-1 PE=2 SV=2

 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 187/289 (64%), Gaps = 30/289 (10%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +I+WD  T  K H++ + ++WVM CAYAPSGS VA GGLDN  ++Y++   + +    + 
Sbjct: 79  LIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRE 138

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +  HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L L+P   
Sbjct: 139 LPGHTGYLSCCRFLD-DNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDF- 196

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
             TF+SG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RTFISGACDASAKLWDIRDGMCKQ---------------------------TFPGHESD 228

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N+V F PSG+A ATGSDDATCRLFD+RAD+E+A Y  D+I+ G TSV FS SGRLLFAG
Sbjct: 229 INAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAG 288

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWDS++  R   L GH+NRVSCL V+ DG A  +GSWD+ L+
Sbjct: 289 YDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLK 337

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Caenorhabditis elegans (taxid: 6239)

>sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis briggsae GN=gpb-1 PE=3 SV=1

 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 187/289 (64%), Gaps = 30/289 (10%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +I+WD  T  K H++ + ++WVM CAYAPSGS VA GGLDN  ++Y++   + +    + 
Sbjct: 79  LIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRE 138

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +  HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L L+P   
Sbjct: 139 LPGHTGYLSCCRFLD-DNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDF- 196

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
             TF+SG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RTFISGACDASAKLWDIRDGMCKQ---------------------------TFPGHESD 228

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N+V F PSG+A ATGSDDATCRLFD+RAD+E+A Y  D+I+ G TSV FS SGRLLFAG
Sbjct: 229 INAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAG 288

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWDS++  R   L GH+NRVSCL V+ DG A  +GSWD+ L+
Sbjct: 289 YDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLK 337

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q6PH57|GBB1_DANRE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Danio rerio GN=gnb1 PE=2 SV=1

 Score =  277 bits (708), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%), Gaps = 30/289 (10%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  K H++ + ++WVM CAYAPSG+ VA GGLDN  ++Y +   + +    + 
Sbjct: 79  LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +A HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L LAP   
Sbjct: 139 LAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDT- 196

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              FVSG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RLFVSGACDASAKLWDVREGMCRQ---------------------------TFTGHESD 228

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N++ F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AG
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAG 288

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
91087273	353	PREDICTED: similar to guanine nucleotide	0.818	0.742	0.737	1e-121
242015145	354	Guanine nucleotide-binding protein subun	0.818	0.740	0.737	1e-121
156549788	349	PREDICTED: guanine nucleotide-binding pr	0.818	0.750	0.733	1e-120
383860345	349	PREDICTED: guanine nucleotide-binding pr	0.818	0.750	0.719	1e-119
380027739	349	PREDICTED: guanine nucleotide-binding pr	0.818	0.750	0.712	1e-118
66544556	349	PREDICTED: guanine nucleotide-binding pr	0.818	0.750	0.712	1e-118
157125093	352	guanine nucleotide-binding protein beta	0.818	0.744	0.709	1e-117
307180980	350	Guanine nucleotide-binding protein subun	0.818	0.748	0.712	1e-117
340716511	349	PREDICTED: guanine nucleotide-binding pr	0.818	0.750	0.702	1e-116
170032642	352	guanine nucleotide-binding protein subun	0.818	0.744	0.705	1e-116

>gi|91087273|ref|XP_975542.1| PREDICTED: similar to guanine nucleotide-binding protein beta 5 (g protein beta5) [Tribolium castaneum] gi|270009547|gb|EFA05995.1| hypothetical protein TcasGA2_TC008821 [Tribolium castaneum]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/289 (73%), Positives = 235/289 (81%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH+VTMP TWVMACAYAPSG++VA GGLDNKVTVY ++L++D + KKKT
Sbjct: 89  MIIWDAFTTNKEHAVTMPTTWVMACAYAPSGNLVACGGLDNKVTVYPLSLDEDVTLKKKT 148

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           V THTS++SCCIFPNSDQQILTGSGD TCALWDVES QLLQSFHGH+ ++M +DLAPSET
Sbjct: 149 VGTHTSYMSCCIFPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSADVMSIDLAPSET 208

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+V IWDMR+G CVQS                           FEGH+SD
Sbjct: 209 GNTFVSGSCDKMVLIWDMRSGQCVQS---------------------------FEGHESD 241

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA Y K+SI+FG  SVDFSVSGRLLFAG
Sbjct: 242 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAVYSKESIIFGVNSVDFSVSGRLLFAG 301

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+NVWD+LKC RV  L GHENRVSCLQVSPDGTA S+GSWD TLR
Sbjct: 302 YNDYTVNVWDTLKCVRVCLLYGHENRVSCLQVSPDGTALSTGSWDYTLR 350

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015145|ref|XP_002428234.1| Guanine nucleotide-binding protein subunit beta, putative [Pediculus humanus corporis] gi|212512795|gb|EEB15496.1| Guanine nucleotide-binding protein subunit beta, putative [Pediculus humanus corporis]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/289 (73%), Positives = 232/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH+VTMP TWVMACAYAPSG++VA GGLDNKVTVY ++LE+D + KKKT
Sbjct: 90  MIIWDAFTTNKEHAVTMPTTWVMACAYAPSGNLVACGGLDNKVTVYPLSLEEDVTVKKKT 149

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           V TH S+ SCC FPNSDQQILTGSGD TCALWDVES QLLQSFHGH G++M LDLAPSET
Sbjct: 150 VGTHMSYTSCCTFPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHNGDVMSLDLAPSET 209

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTF SGS DK+V IWDMRTG  VQSF                           EGHQSD
Sbjct: 210 GNTFASGSCDKMVLIWDMRTGQSVQSF---------------------------EGHQSD 242

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +NSVK+HPSGDAVATGSDDATCRLFDLRADKEVA Y K+SI+FGA SVDFSVSGRLLFAG
Sbjct: 243 INSVKYHPSGDAVATGSDDATCRLFDLRADKEVAIYTKESIIFGANSVDFSVSGRLLFAG 302

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYTIN+WDSLKC R++ L GHENRVSCLQVSPDGTA S+GSWD TLR
Sbjct: 303 YNDYTINIWDSLKCVRISLLYGHENRVSCLQVSPDGTALSTGSWDFTLR 351

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156549788|ref|XP_001606387.1| PREDICTED: guanine nucleotide-binding protein subunit beta-5-like [Nasonia vitripennis]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/289 (73%), Positives = 233/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH+VTMP TWV+ACAYAPSG +VA GGLDNKVTVY ++LEDD SAKKKT
Sbjct: 85  MIIWDAFTTNKEHAVTMPTTWVIACAYAPSGQLVACGGLDNKVTVYPLSLEDDVSAKKKT 144

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           V THTS+ SCC FPNSDQQ+LTGSGD TCALWDVES QLLQ+FHGH+  +M +DLAPSET
Sbjct: 145 VGTHTSYTSCCAFPNSDQQVLTGSGDSTCALWDVESGQLLQNFHGHSDSVMSIDLAPSET 204

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DKLV IWDMR+G CVQSF                           EGH+SD
Sbjct: 205 GNTFVSGSCDKLVFIWDMRSGQCVQSF---------------------------EGHESD 237

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSV+FHPSGDAVATGSDDATCRLFDLRADKEVA Y K+SI+FGA +VD SVSGRLLFAG
Sbjct: 238 VNSVRFHPSGDAVATGSDDATCRLFDLRADKEVAVYTKESIIFGANAVDLSVSGRLLFAG 297

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+NVWD+LKC RV  L GHENRVSCL+VSPDGTA S+GSWDTTLR
Sbjct: 298 YNDYTVNVWDTLKCQRVALLYGHENRVSCLRVSPDGTALSTGSWDTTLR 346

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860345|ref|XP_003705651.1| PREDICTED: guanine nucleotide-binding protein subunit beta-5-like [Megachile rotundata]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/289 (71%), Positives = 234/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH++TMP  WVMACAYAPSG++VA GGLDNKVTVY ++ EDD S +KKT
Sbjct: 85  MIIWDAFTTNKEHALTMPTIWVMACAYAPSGTLVACGGLDNKVTVYPLSQEDDVSTRKKT 144

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           VATHTS++SCC+FPNSDQQILTGSGD TCALWDVES QLLQSF GH+ ++M +DLAPSET
Sbjct: 145 VATHTSYMSCCVFPNSDQQILTGSGDSTCALWDVESGQLLQSFLGHSSDVMSIDLAPSET 204

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+V IWDMRTG CVQSF                           EGHQSD
Sbjct: 205 GNTFVSGSCDKMVLIWDMRTGQCVQSF---------------------------EGHQSD 237

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHP GDAVATGSDDATCRLFDLRAD+E+A Y K+SI+FGA +VDFSVSGRLLFAG
Sbjct: 238 VNSVKFHPGGDAVATGSDDATCRLFDLRADREIAVYGKESIIFGANAVDFSVSGRLLFAG 297

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+N+WD+LKC RV  L GHENRVSCL+VSPDGTA S+GSWD+TLR
Sbjct: 298 YNDYTVNIWDTLKCQRVAFLYGHENRVSCLRVSPDGTALSTGSWDSTLR 346

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027739|ref|XP_003697576.1| PREDICTED: guanine nucleotide-binding protein subunit beta-5-like [Apis florea]

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/289 (71%), Positives = 233/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH++TMP  WVMACAYAPSG++VA GGLDNKVTVY ++ EDD S +KKT
Sbjct: 85  MIIWDAFTTNKEHALTMPTIWVMACAYAPSGALVACGGLDNKVTVYPLSQEDDVSTRKKT 144

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           VATHTS++SCC+FPNSDQQILTGSGD TCALWDVES QLLQSF GH+ ++M +DLAPSET
Sbjct: 145 VATHTSYMSCCVFPNSDQQILTGSGDSTCALWDVESGQLLQSFLGHSSDVMSIDLAPSET 204

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+V IWDMRTG CVQSF                           EGHQSD
Sbjct: 205 GNTFVSGSCDKMVLIWDMRTGQCVQSF---------------------------EGHQSD 237

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHP GDAVATGSDDATCRLFDLRAD+E+A Y K+SI+FGA +VD S+SGRLLFAG
Sbjct: 238 VNSVKFHPGGDAVATGSDDATCRLFDLRADREIAVYAKESIIFGANAVDLSISGRLLFAG 297

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+N+WD+LKC RV  L GHENRVSCL+VSPDGTA S+GSWD+TLR
Sbjct: 298 YNDYTVNIWDTLKCQRVAFLYGHENRVSCLRVSPDGTALSTGSWDSTLR 346

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66544556|ref|XP_392638.2| PREDICTED: guanine nucleotide-binding protein subunit beta-5 [Apis mellifera]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/289 (71%), Positives = 233/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH++TMP  WVMACAYAPSG++VA GGLDNKVTVY ++ EDD S +KKT
Sbjct: 85  MIIWDAFTTNKEHALTMPTIWVMACAYAPSGALVACGGLDNKVTVYPLSQEDDVSTRKKT 144

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           VATHTS++SCC+FPNSDQQILTGSGD TCALWDVES QLLQSF GH+ ++M +DLAPSET
Sbjct: 145 VATHTSYMSCCVFPNSDQQILTGSGDSTCALWDVESGQLLQSFLGHSSDVMSIDLAPSET 204

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+V IWDMRTG CVQSF                           EGHQSD
Sbjct: 205 GNTFVSGSCDKMVLIWDMRTGQCVQSF---------------------------EGHQSD 237

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHP GDAVATGSDDATCRLFDLRAD+E+A Y K+SI+FGA +VD S+SGRLLFAG
Sbjct: 238 VNSVKFHPGGDAVATGSDDATCRLFDLRADREIAVYAKESIIFGANAVDLSISGRLLFAG 297

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+N+WD+LKC RV  L GHENRVSCL+VSPDGTA S+GSWD+TLR
Sbjct: 298 YNDYTVNIWDTLKCQRVAFLYGHENRVSCLRVSPDGTALSTGSWDSTLR 346

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157125093|ref|XP_001660617.1| guanine nucleotide-binding protein beta 5 (g protein beta5) [Aedes aegypti] gi|108873776|gb|EAT38001.1| AAEL010070-PA [Aedes aegypti]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/289 (70%), Positives = 233/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  KEH+VTMP TWVM C+YAPSG++VA GGLDNKVTVY I +E+D S++KKT
Sbjct: 88  LIIWDAFTNYKEHAVTMPTTWVMGCSYAPSGNLVACGGLDNKVTVYPITMEEDISSRKKT 147

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           V THTS++SCCIFPNSDQQILTGSGD TCALWDVES QLLQSFHGHTG++M +DLAP+ET
Sbjct: 148 VGTHTSYMSCCIFPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHTGDVMSIDLAPNET 207

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+  IWDMR+G+ VQSF                           EGHQSD
Sbjct: 208 GNTFVSGSCDKMAFIWDMRSGHVVQSF---------------------------EGHQSD 240

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHPSGDA++TGSDD+TCRLFD+RADKEVA + KDSI+FG  SVDFSVSGRLLFAG
Sbjct: 241 VNSVKFHPSGDAISTGSDDSTCRLFDMRADKEVAVFSKDSIIFGVNSVDFSVSGRLLFAG 300

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+NVWD+LK  RV  L GHEN+VSCLQVSPDGTA S+GSWD TLR
Sbjct: 301 YNDYTVNVWDTLKAQRVCLLYGHENKVSCLQVSPDGTALSTGSWDFTLR 349

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180980|gb|EFN68760.1| Guanine nucleotide-binding protein subunit beta-5 [Camponotus floridanus]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/289 (71%), Positives = 229/289 (79%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH+V+MP  WVMACAY PSG++VA GGLDNKVTVY ++LEDD SA KKT
Sbjct: 86  MIIWDAFTTNKEHAVSMPTRWVMACAYGPSGTLVACGGLDNKVTVYTLSLEDDVSAHKKT 145

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           V THTS++SCC FPNSDQQILTGSGD TC LWDVES QLLQSF GH+ ++M +DLAPSET
Sbjct: 146 VGTHTSYMSCCAFPNSDQQILTGSGDSTCGLWDVESGQLLQSFQGHSSDVMSIDLAPSET 205

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSG  DKLV IWDMR+G CVQSF                           EGHQSD
Sbjct: 206 GNTFVSGGCDKLVLIWDMRSGQCVQSF---------------------------EGHQSD 238

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSV+FHP GDAVATGSDDATCRLFDLRAD+EVA Y K+SI+FGA +VD SVSGRLLFAG
Sbjct: 239 VNSVRFHPGGDAVATGSDDATCRLFDLRADREVAVYAKESIIFGANAVDLSVSGRLLFAG 298

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+NVWD+LKC RV  L GHENRVSCL+VSPDGTA S+GSWD+TLR
Sbjct: 299 YNDYTVNVWDTLKCQRVALLYGHENRVSCLRVSPDGTALSTGSWDSTLR 347

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716511|ref|XP_003396741.1| PREDICTED: guanine nucleotide-binding protein subunit beta-5-like [Bombus terrestris]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/289 (70%), Positives = 231/289 (79%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           MIIWD  T  KEH++TMP  WVMACAYAPSG++VA GGLDNKVTVY ++ EDD S +KKT
Sbjct: 85  MIIWDAFTTNKEHALTMPTIWVMACAYAPSGTLVACGGLDNKVTVYPLSQEDDVSTRKKT 144

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           VATHTS++SCC+FPNSDQQILTG GD TC+LWDVES QLLQ+F GH+ ++M +DLAPSE 
Sbjct: 145 VATHTSYMSCCVFPNSDQQILTGCGDSTCSLWDVESGQLLQNFLGHSSDVMSIDLAPSEI 204

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+V IWDMRTG CVQSF                           EGHQSD
Sbjct: 205 GNTFVSGSCDKMVLIWDMRTGQCVQSF---------------------------EGHQSD 237

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHP GDAVATGSDDATCRLFDLRAD+E+A Y K+SI+FGA +VD SVSGRLLFAG
Sbjct: 238 VNSVKFHPGGDAVATGSDDATCRLFDLRADREIAVYAKESIIFGANAVDLSVSGRLLFAG 297

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+N+WD+LKC RV  L GHENRVSCL+VSPDGTA S+GSWD+TLR
Sbjct: 298 YNDYTVNIWDTLKCQRVAFLYGHENRVSCLRVSPDGTALSTGSWDSTLR 346

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170032642|ref|XP_001844189.1| guanine nucleotide-binding protein subunit beta 5 [Culex quinquefasciatus] gi|167873019|gb|EDS36402.1| guanine nucleotide-binding protein subunit beta 5 [Culex quinquefasciatus]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/289 (70%), Positives = 232/289 (80%), Gaps = 27/289 (9%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  KEH+VTMP TWVM C+YAPSG++VA GGLDNKVTVY I +E+D S++KKT
Sbjct: 88  LIIWDAFTNYKEHAVTMPTTWVMGCSYAPSGNLVACGGLDNKVTVYPITMEEDISSRKKT 147

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           V THTS++SCCIFPNSDQQILTGSGD TCALWDVES QLLQSFHGHTG++M +DLAP+ET
Sbjct: 148 VGTHTSYMSCCIFPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHTGDVMSIDLAPNET 207

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           GNTFVSGS DK+  IWDMR+G+ VQS                           FEGH SD
Sbjct: 208 GNTFVSGSCDKMAFIWDMRSGHVVQS---------------------------FEGHLSD 240

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           VNSVKFHPSGDA++TGSDD+TCRLFD+RADKEVA + KDSI+FG  SVDFSVSGRLLFAG
Sbjct: 241 VNSVKFHPSGDAISTGSDDSTCRLFDMRADKEVAVFSKDSIIFGVNSVDFSVSGRLLFAG 300

Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           YNDYT+NVWD+LK  RV  L GHEN+VSCLQVSPDGTA S+GSWD TLR
Sbjct: 301 YNDYTVNVWDTLKAQRVCLLYGHENKVSCLQVSPDGTALSTGSWDFTLR 349

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
ZFIN|ZDB-GENE-070112-342	355	gnb5a "guanine nucleotide bind	0.468	0.422	0.671	3e-110
UNIPROTKB|E1BVN4	395	GNB5 "Uncharacterized protein"	0.468	0.379	0.651	1.2e-108
UNIPROTKB|Q6PNB6	353	GNB5 "Guanine nucleotide-bindi	0.475	0.430	0.642	1.2e-108
MGI|MGI:101848	395	Gnb5 "guanine nucleotide bindi	0.475	0.384	0.642	1.2e-108
RGD|620759	353	Gnb5 "guanine nucleotide bindi	0.475	0.430	0.642	1.2e-108
UNIPROTKB|O14775	395	GNB5 "Guanine nucleotide-bindi	0.475	0.384	0.642	1.5e-108
UNIPROTKB|A5PJS1	353	GNB5 "GNB5 protein" [Bos tauru	0.475	0.430	0.642	1.5e-108
UNIPROTKB|F1RZC0	396	GNB5 "Uncharacterized protein"	0.475	0.383	0.638	6.4e-108
UNIPROTKB|I3LLQ2	354	GNB5 "Uncharacterized protein"	0.475	0.429	0.638	6.4e-108
WB|WBGene00001680	356	gpb-2 [Caenorhabditis elegans	0.468	0.421	0.6	2.2e-103

ZFIN|ZDB-GENE-070112-342 gnb5a "guanine nucleotide binding protein (G protein), beta 5a" [Danio rerio (taxid:7955)]

 Score = 562 (202.9 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
 Identities = 102/152 (67%), Positives = 121/152 (79%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  VA GGLDNK +VY ++L+  ++ +AKK
Sbjct:    89 VIVWDAFTTNKEHAVTMPCTWVMACAYAPSGCAVACGGLDNKCSVYPLSLDKNENLAAKK 148

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES Q+LQSFHGH  +++ LDLAPS
Sbjct:   149 KSVAMHTNYLSACCFTNSDMQILTSSGDGTCALWDVESGQMLQSFHGHAADVLCLDLAPS 208

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH 150
             ETGNTFVSG  DK   +WDMRTG CVQSFE H
Sbjct:   209 ETGNTFVSGGCDKKACVWDMRTGQCVQSFESH 240

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BVN4 GNB5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 550 (198.7 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
 Identities = 99/152 (65%), Positives = 119/152 (78%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:   129 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 188

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct:   189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH 150
             ETGNTFVSG  DK   +WDMR+G C+QSFE H
Sbjct:   249 ETGNTFVSGGCDKKAMVWDMRSGQCIQSFETH 280

GO:0005634 "nucleus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

UNIPROTKB|Q6PNB6 GNB5 "Guanine nucleotide-binding protein subunit beta-5" [Oryctolagus cuniculus (taxid:9986)]

 Score = 549 (198.3 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
 Identities = 99/154 (64%), Positives = 120/154 (77%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:    87 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct:   147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             ETGNTFVSG  DK   +WDMR+G CVQ+FE H +
Sbjct:   207 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 240

GO:0005634 "nucleus" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS

MGI|MGI:101848 Gnb5 "guanine nucleotide binding protein (G protein), beta 5" [Mus musculus (taxid:10090)]

 Score = 549 (198.3 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
 Identities = 99/154 (64%), Positives = 120/154 (77%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:   129 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 188

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct:   189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             ETGNTFVSG  DK   +WDMR+G CVQ+FE H +
Sbjct:   249 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 282

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IDA

GO:0032794 "GTPase activating protein binding" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0044297 "cell body" evidence=ISO

RGD|620759 Gnb5 "guanine nucleotide binding protein (G protein), beta 5" [Rattus norvegicus (taxid:10116)]

 Score = 549 (198.3 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
 Identities = 99/154 (64%), Positives = 120/154 (77%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:    87 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct:   147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             ETGNTFVSG  DK   +WDMR+G CVQ+FE H +
Sbjct:   207 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 240

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0005834 "heterotrimeric G-protein complex" evidence=TAS

GO:0005886 "plasma membrane" evidence=ISO

GO:0007165 "signal transduction" evidence=TAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IC;ISO;TAS

GO:0032794 "GTPase activating protein binding" evidence=IPI

GO:0043234 "protein complex" evidence=IDA

GO:0044297 "cell body" evidence=IDA

UNIPROTKB|O14775 GNB5 "Guanine nucleotide-binding protein subunit beta-5" [Homo sapiens (taxid:9606)]

 Score = 549 (198.3 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
 Identities = 99/154 (64%), Positives = 120/154 (77%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:   129 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 188

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct:   189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             ETGNTFVSG  DK   +WDMR+G CVQ+FE H +
Sbjct:   249 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 282

GO:0005634 "nucleus" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0003924 "GTPase activity" evidence=NAS

GO:0004871 "signal transducer activity" evidence=NAS

GO:0007165 "signal transduction" evidence=NAS

GO:0005834 "heterotrimeric G-protein complex" evidence=NAS

GO:0006184 "GTP catabolic process" evidence=NAS

UNIPROTKB|A5PJS1 GNB5 "GNB5 protein" [Bos taurus (taxid:9913)]

 Score = 549 (198.3 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
 Identities = 99/154 (64%), Positives = 120/154 (77%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:    87 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query:    59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
             K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct:   147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206

Query:   119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             ETGNTFVSG  DK   +WDMR+G CVQ+FE H +
Sbjct:   207 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 240

GO:0005634 "nucleus" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|F1RZC0 GNB5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 544 (196.6 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 99/155 (63%), Positives = 121/155 (78%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:   129 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 188

Query:    59 KTVATHTSFISCCIFPNSD-QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
             K+VA HT+++S C F NSD QQILT SGD TCALWDVES QLLQSFHGH  +++ LDLAP
Sbjct:   189 KSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 248

Query:   118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             SETGNTFVSG  DK   +WDMR+G C+Q+FE H +
Sbjct:   249 SETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHES 283

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|I3LLQ2 GNB5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 544 (196.6 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 99/155 (63%), Positives = 121/155 (78%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
             +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct:    87 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 146

Query:    59 KTVATHTSFISCCIFPNSD-QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
             K+VA HT+++S C F NSD QQILT SGD TCALWDVES QLLQSFHGH  +++ LDLAP
Sbjct:   147 KSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206

Query:   118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
             SETGNTFVSG  DK   +WDMR+G C+Q+FE H +
Sbjct:   207 SETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHES 241

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

WB|WBGene00001680 gpb-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 530 (191.6 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
 Identities = 90/150 (60%), Positives = 117/150 (78%)

Query:     1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
             +I+WDG T  KEH++TMP TWVMACA++PS  ++A GGLDNK +V  ++ EDD   KK+ 
Sbjct:    92 VIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQ 151

Query:    61 VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
             VATHTS++SCC F  SD  ILTGSGD TCA+WDVES QL+Q+FHGHTG++  +D+   +T
Sbjct:   152 VATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDT 211

Query:   121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGH 150
             GNTF+S  +DK   +WD+R+G CVQSFEGH
Sbjct:   212 GNTFISAGADKHSLVWDIRSGQCVQSFEGH 241

GO:0040007 "growth" evidence=IMP

GO:0030163 "protein catabolic process" evidence=IMP

GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=IGI

GO:0046662 "regulation of oviposition" evidence=IMP

GO:0040012 "regulation of locomotion" evidence=IMP

GO:0007631 "feeding behavior" evidence=IMP

GO:0007212 "dopamine receptor signaling pathway" evidence=IMP

GO:0032094 "response to food" evidence=IMP

GO:0007213 "G-protein coupled acetylcholine receptor signaling pathway" evidence=IGI;IMP

GO:0043051 "regulation of pharyngeal pumping" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PNB6	GBB5_RABIT	No assigned EC number	0.6391	0.8187	0.7422	yes	N/A
Q5RDY7	GBB5_PONAB	No assigned EC number	0.6391	0.8187	0.7422	yes	N/A
O14775	GBB5_HUMAN	No assigned EC number	0.6391	0.8187	0.6632	yes	N/A
Q40687	GBB_ORYSJ	No assigned EC number	0.3713	0.8187	0.6894	yes	N/A
Q10282	GBB_SCHPO	No assigned EC number	0.3667	0.7968	0.8360	yes	N/A
P18851	GBB_YEAST	No assigned EC number	0.3181	0.8125	0.6146	yes	N/A
P49177	GBB_ARATH	No assigned EC number	0.3737	0.8187	0.6949	yes	N/A
Q20636	GBB2_CAEEL	No assigned EC number	0.5743	0.8187	0.7359	yes	N/A
P62882	GBB5_RAT	No assigned EC number	0.6426	0.8187	0.7422	yes	N/A
P36408	GBB_DICDI	No assigned EC number	0.4463	0.8093	0.7463	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	320
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-66
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-47
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-39
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-31
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-29
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-26
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-24
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-23
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-20
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	8e-10
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	7e-08
smart00320	40	smart00320, WD40, WD40 repeats	7e-08
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	5e-07
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	3e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	9e-05
smart00320	40	smart00320, WD40, WD40 repeats	2e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	7e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  209 bits (533), Expect = 4e-66
 Identities = 91/284 (32%), Positives = 137/284 (48%), Gaps = 23/284 (8%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
            V   A++P G ++A+G  D  + V+ +   +      +T+  HT  +           +
Sbjct: 11  GVTCVAFSPDGKLLATGSGDGTIKVWDLETGE----LLRTLKGHTGPVRDVAASADGTYL 66

Query: 81  LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT 140
            +GS D T  LWD+E+ + +++  GHT  +  +  +P   G    S S DK + +WD+ T
Sbjct: 67  ASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPD--GRILSSSSRDKTIKVWDVET 124

Query: 141 GYCVQSFEGHHNLIT---------------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVK 185
           G C+ +  GH + +                 D  + +WD+RTG CV +  GH  +VNSV 
Sbjct: 125 GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVA 184

Query: 186 FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYT 245
           F P G+ + + S D T +L+DL   K +   +      G  SV FS  G LL +G  D T
Sbjct: 185 FSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHEN--GVNSVAFSPDGYLLASGSEDGT 242

Query: 246 INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           I VWD      V  L GH N V+ L  SPDG   +SGS D T+R
Sbjct: 243 IRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIR 286

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  159 bits (403), Expect = 9e-47
 Identities = 93/251 (37%), Positives = 134/251 (53%), Gaps = 27/251 (10%)

Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           ++T+  HT  ++C  F    + + TGSGD T  +WD+E+ +LL++  GHTG + D+  + 
Sbjct: 2   RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA 61

Query: 118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH------------HNLIT---DDKLVNI 162
              G    SGSSDK + +WD+ TG CV++  GH              +++    DK + +
Sbjct: 62  D--GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKV 119

Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK--KDS 220
           WD+ TG C+ +  GH   VNSV F P G  VA+ S D T +L+DLR  K VA        
Sbjct: 120 WDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGE 179

Query: 221 ILFGATSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           +     SV FS  G  L +  +D TI +WD  + KC     L GHEN V+ +  SPDG  
Sbjct: 180 V----NSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGT--LRGHENGVNSVAFSPDGYL 233

Query: 279 FSSGSWDTTLR 289
            +SGS D T+R
Sbjct: 234 LASGSEDGTIR 244

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  140 bits (355), Expect = 1e-39
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 21/220 (9%)

Query: 2   IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV 61
            +WD  T     ++T   ++V + A++P G +++S   D  + V+ +    ++     T+
Sbjct: 76  RLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV----ETGKCLTTL 131

Query: 62  ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETG 121
             HT +++   F      + + S D T  LWD+ + + + +  GHTGE+    +A S  G
Sbjct: 132 RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV--NSVAFSPDG 189

Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------DDKLVNIWDMR 166
              +S SSD  + +WD+ TG C+ +  GH N +                +D  + +WD+R
Sbjct: 190 EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249

Query: 167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           TG CVQ+  GH + V S+ + P G  +A+GS D T R++D
Sbjct: 250 TGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  121 bits (303), Expect = 5e-31
 Identities = 97/312 (31%), Positives = 158/312 (50%), Gaps = 33/312 (10%)

Query: 1   MIIWDGLTQTKE-HSVTMPATWVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKK 58
           + +WD  T  K   ++   +  V + A++P G ++ASG  LD  + ++ +     +    
Sbjct: 136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDL----RTGKPL 191

Query: 59  KTVATHTSFISCCIF-PNSDQQILTGSGDCTCALWDVESSQLLQS-FHGHTGELMDLDLA 116
            T+A HT  +S   F P+    I +GS D T  LWD+ + +LL+S   GH+     +  +
Sbjct: 192 STLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSD---SVVSS 248

Query: 117 PSETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHNLIT---------------DDKLV 160
            S  G+   SGSSD  + +WD+R+    +++  GH + +                 D  V
Sbjct: 249 FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTV 308

Query: 161 NIWDMRTGYCVQ--SFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYK 217
            +WD+ TG  +   + +GH+  V+S+ F P G  + +G SDD T RL+DLR  K +   +
Sbjct: 309 RLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLE 368

Query: 218 KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT 277
             S      SV FS  GR++ +G  D T+ +WD      + +L GH +RV+ L  SPDG 
Sbjct: 369 GHS---NVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGK 425

Query: 278 AFSSGSWDTTLR 289
           + +SGS D T+R
Sbjct: 426 SLASGSSDNTIR 437

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  117 bits (293), Expect = 1e-29
 Identities = 83/278 (29%), Positives = 120/278 (43%), Gaps = 19/278 (6%)

Query: 29  PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT 88
           P G+ +         TV    L       +       S  S    P+        S D T
Sbjct: 120 PDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGT 179

Query: 89  CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-F 147
             LWD+ + + L +  GHT  +  L  +P   G    SGSSD  + +WD+ TG  ++S  
Sbjct: 180 IKLWDLRTGKPLSTLAGHTDPVSSLAFSPDG-GLLIASGSSDGTIRLWDLSTGKLLRSTL 238

Query: 148 EGHHN--------------LITDDKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDA 192
            GH +                + D  + +WD+R+    +++  GH S V SV F P G  
Sbjct: 239 SGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKL 298

Query: 193 VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG-RLLFAGYNDYTINVWDS 251
           +A+GS D T RL+DL   K ++           +S+ FS  G  L+  G +D TI +WD 
Sbjct: 299 LASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDL 358

Query: 252 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
                +  L GH N V  +  SPDG   SSGS D T+R
Sbjct: 359 RTGKPLKTLEGHSN-VLSVSFSPDGRVVSSGSTDGTVR 395

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  106 bits (265), Expect = 7e-26
 Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 24/255 (9%)

Query: 57  KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-LLQSFHGHTGELMDLDL 115
               +  H   I+   F    + +L+GS D T  LWD+++ + L++S  G     +    
Sbjct: 57  SSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLA 116

Query: 116 APSETGNTFVSGSS--DKLVNIWDMRTGY-CVQSFEGHHNLITD---------------- 156
             S  GN+ +  SS  D  V +WD+ T    +++ EGH   +T                 
Sbjct: 117 LSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSL 176

Query: 157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVAC 215
           D  + +WD+RTG  + +  GH   V+S+ F P G   +A+GS D T RL+DL   K +  
Sbjct: 177 DGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS 236

Query: 216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD-SLKCCRVNHLMGHENRVSCLQVSP 274
                    +    FS  G LL +G +D TI +WD       +  L GH + V  +  SP
Sbjct: 237 TLSGHS--DSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSP 294

Query: 275 DGTAFSSGSWDTTLR 289
           DG   +SGS D T+R
Sbjct: 295 DGKLLASGSSDGTVR 309

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  103 bits (256), Expect = 1e-24
 Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 29/280 (10%)

Query: 2   IIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKT 60
            +WD  T     ++      V + A++P G  ++ASG  D  + ++ ++        + T
Sbjct: 181 KLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS---TGKLLRST 237

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQSFHGHTGELMDLDLAPSE 119
           ++ H+  +     P+    + +GS D T  LWD+ S S LL++  GH+  ++ +  +P  
Sbjct: 238 LSGHSDSVVSSFSPDG-SLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPD- 295

Query: 120 TGNTFVSGSSDKLVNIWDMRTGYCVQ--SFEGHHNLIT----------------DDKLVN 161
            G    SGSSD  V +WD+ TG  +   + +GH   ++                DD  + 
Sbjct: 296 -GKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIR 354

Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI 221
           +WD+RTG  +++ EGH S+V SV F P G  V++GS D T RL+DL     +     D  
Sbjct: 355 LWDLRTGKPLKTLEGH-SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLL--RNLDGH 411

Query: 222 LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM 261
               TS+DFS  G+ L +G +D TI +WD     +     
Sbjct: 412 TSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFS 451

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 99.8 bits (247), Expect = 2e-23
 Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 20/248 (8%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           + +WD  T     S     +  +  +++P GS++ASG  D  + ++ +     SS+  +T
Sbjct: 223 IRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDL---RSSSSLLRT 279

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ--SFHGHTGELMDLDLAPS 118
           ++ H+S +    F    + + +GS D T  LWD+E+ +LL   +  GH G +  L  +P 
Sbjct: 280 LSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPD 339

Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT--------------DDKLVNIWD 164
            +      GS D  + +WD+RTG  +++ EGH N+++               D  V +WD
Sbjct: 340 GS-LLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWD 398

Query: 165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFG 224
           + TG  +++ +GH S V S+ F P G ++A+GS D T RL+DL+   +   +  D  +  
Sbjct: 399 LSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVLA 458

Query: 225 ATSVDFSV 232
           + S D SV
Sbjct: 459 SKSSDLSV 466

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK--KDSILFGATS 227
             ++ +GH   V  V F P G  +ATGS D T +++DL   + +   K     +      
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPV----RD 56

Query: 228 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT 287
           V  S  G  L +G +D TI +WD      V  L GH + VS +  SPDG   SS S D T
Sbjct: 57  VAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKT 116

Query: 288 LR 289
           ++
Sbjct: 117 IK 118

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 59.3 bits (142), Expect = 8e-10
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR-ADKEV 213
             D LV++ D+ +        GH+  + S+ F P G+ + +GS D T +L+DL   +K +
Sbjct: 46  LSDSLVSLPDLSS----LLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLI 101

Query: 214 ACYKKDSILFGATSVDFSVSGRLLFA--GYNDYTINVWD-SLKCCRVNHLMGHENRVSCL 270
              +       +     S  G  +       D T+ +WD S     +  L GH   V+ L
Sbjct: 102 KSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSL 161

Query: 271 QVSPDG-TAFSSGSWDTTLR 289
             SPDG    S  S D T++
Sbjct: 162 AFSPDGKLLASGSSLDGTIK 181

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 47.7 bits (114), Expect = 7e-08
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           G  +++ +GH   V SV F P G+ +A+GSDD T R++D
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 47.7 bits (114), Expect = 7e-08
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           +G  +++ +GH   V SV F P G  +A+GSDD T +L+D
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 50.7 bits (121), Expect = 5e-07
 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 23/128 (17%)

Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQS-------FHGHTGELMDLDLAPSETGNTFVS 126
           P   Q++ T S D T   W +    L Q+         GHT ++  +   PS   N   S
Sbjct: 85  PFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPS-AMNVLAS 143

Query: 127 GSSDKLVNIWDMRTGYCVQSFEGHHNLITD---------------DKLVNIWDMRTGYCV 171
             +D +VN+WD+  G  V+  + H + IT                DK +NI D R G  V
Sbjct: 144 AGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIV 203

Query: 172 QSFEGHQS 179
            S E H S
Sbjct: 204 SSVEAHAS 211

Length = 493

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 45.5 bits (107), Expect = 3e-05
 Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 44/274 (16%)

Query: 22  VMACAYAPSGSVVASGGLDNKVTVYAIA--LEDDSSAKKKTV--ATHTSFISCCIFPNSD 77
           V A  +   G   A+ G++ K+ ++     ++D        V  A+ +     C      
Sbjct: 486 VCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIK 545

Query: 78  QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137
            Q+ + + +    +WDV  SQL+     H   +  +D + ++      SGS D  V +W 
Sbjct: 546 SQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADP-TLLASGSDDGSVKLWS 604

Query: 138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS 197
           +  G  + + +   N+                CVQ      S+        SG ++A GS
Sbjct: 605 INQGVSIGTIKTKANIC---------------CVQ----FPSE--------SGRSLAFGS 637

Query: 198 DDATCRLFDLRADKEVACYKKDSILFGATSVDFS--VSGRLLFAGYNDYTINVWD-SLKC 254
            D     +DLR  K   C    +++  + +V +   V    L +   D T+ +WD S+  
Sbjct: 638 ADHKVYYYDLRNPKLPLC----TMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSI 693

Query: 255 CRVNH-----LMGHENRVSCLQVSPDGTAFSSGS 283
             +N       MGH N  + + +S      ++GS
Sbjct: 694 SGINETPLHSFMGHTNVKNFVGLSVSDGYIATGS 727

Length = 793

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 98  QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137
           +LL++  GHTG +  +  +P   GN   SGS D  V +WD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPD--GNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 96  SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137
           S +LL++  GHTG +  +  +P   G    SGS D  + +WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPD--GKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 254 CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
              +  L GH   V+ +  SPDG   +SGS D T+R
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVR 36

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93
            +T+  HT  ++   F      + +GS D T  +WD
Sbjct: 3  LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           +  L GH   V+ +  SPDG   +SGS D T++
Sbjct: 5   LKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIK 37

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 54 SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93
          S    KT+  HT  ++   F    + + +GS D T  LWD
Sbjct: 1  SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
KOG0286|consensus	343		100.0
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0263|consensus	707		100.0
KOG0279|consensus	315		100.0
KOG0265|consensus	338		100.0
KOG0315|consensus	311		100.0
KOG0284|consensus	464		100.0
KOG0272|consensus	459		100.0
KOG0285|consensus	460		100.0
KOG0273|consensus	524		100.0
KOG0295|consensus	406		100.0
KOG0266|consensus	456		100.0
KOG0318|consensus	603		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0282|consensus	503		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0296|consensus	399		100.0
KOG0291|consensus	893		100.0
KOG0286|consensus	343		100.0
KOG0293|consensus	519		100.0
KOG0279|consensus	315		100.0
KOG0295|consensus	406		100.0
KOG0316|consensus	307		100.0
KOG0645|consensus	312		100.0
KOG0273|consensus	524		100.0
KOG0319|consensus	775		100.0
KOG0263|consensus	707		100.0
KOG0278|consensus	334		100.0
KOG0288|consensus	459		100.0
KOG0291|consensus	893		100.0
KOG0319|consensus	775		100.0
KOG0276|consensus	794		100.0
KOG0281|consensus	499		100.0
KOG0315|consensus	311		100.0
KOG0292|consensus	1202		100.0
KOG0285|consensus	460		100.0
KOG0276|consensus	794		100.0
KOG0647|consensus	347		100.0
KOG0318|consensus	603		100.0
KOG0313|consensus	423		100.0
KOG0643|consensus	327		100.0
KOG0284|consensus	464		100.0
KOG1446|consensus	311		100.0
KOG0306|consensus	888		100.0
KOG0292|consensus	1202		99.98
KOG0277|consensus	311		99.98
KOG0313|consensus	423		99.98
PTZ00421	493	coronin; Provisional	99.98
KOG0640|consensus	430		99.98
KOG0305|consensus	484		99.98
KOG0275|consensus	508		99.97
KOG0296|consensus	399		99.97
KOG0281|consensus	499		99.97
KOG0266|consensus	456		99.97
KOG1407|consensus	313		99.97
KOG0274|consensus	537		99.97
KOG0306|consensus	888		99.97
KOG0277|consensus	311		99.97
KOG0289|consensus	506		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG1036|consensus	323		99.97
KOG0265|consensus	338		99.97
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.97
KOG0283|consensus	712		99.97
KOG0316|consensus	307		99.97
KOG0772|consensus	641		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0294|consensus	362		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0645|consensus	312		99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
KOG0641|consensus	350		99.96
KOG0274|consensus	537		99.96
KOG0299|consensus	479		99.96
KOG0282|consensus	503		99.96
KOG0310|consensus	487		99.96
KOG0308|consensus	735		99.96
KOG0278|consensus	334		99.96
KOG0301|consensus	745		99.96
KOG0973|consensus	942		99.95
KOG1408|consensus	1080		99.95
KOG1446|consensus	311		99.95
KOG0288|consensus	459		99.95
KOG2096|consensus	420		99.95
KOG0300|consensus	481		99.95
KOG1332|consensus	299		99.95
KOG0268|consensus	433		99.95
KOG0269|consensus	839		99.95
KOG0264|consensus	422		99.95
KOG1407|consensus	313		99.95
KOG0283|consensus	712		99.95
KOG0646|consensus	476		99.95
KOG2106|consensus	626		99.95
KOG0646|consensus	476		99.94
KOG0268|consensus	433		99.94
KOG0289|consensus	506		99.94
KOG0639|consensus	705		99.94
KOG0308|consensus	735		99.94
KOG0643|consensus	327		99.94
KOG2445|consensus	361		99.94
KOG0267|consensus	825		99.94
KOG0310|consensus	487		99.94
KOG0772|consensus	641		99.94
KOG1539|consensus	910		99.94
KOG0640|consensus	430		99.94
KOG1274|consensus	933		99.94
KOG0293|consensus	519		99.94
KOG0275|consensus	508		99.93
KOG2048|consensus	691		99.93
KOG2055|consensus	514		99.93
KOG0299|consensus	479		99.93
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.93
KOG1539|consensus	910		99.92
KOG0267|consensus	825		99.92
KOG4283|consensus	397		99.92
KOG0641|consensus	350		99.92
KOG0300|consensus	481		99.92
KOG1332|consensus	299		99.92
KOG0973|consensus	942		99.92
KOG1036|consensus	323		99.92
KOG4328|consensus	498		99.91
KOG0264|consensus	422		99.91
KOG0305|consensus	484		99.91
KOG0301|consensus	745		99.91
KOG0647|consensus	347		99.91
KOG0321|consensus	720		99.91
KOG1274|consensus	933		99.9
KOG1063|consensus	764		99.9
KOG0639|consensus	705		99.9
KOG4378|consensus	673		99.9
KOG0269|consensus	839		99.9
KOG1273|consensus	405		99.9
KOG2096|consensus	420		99.9
KOG0302|consensus	440		99.9
KOG2919|consensus	406		99.9
KOG4283|consensus	397		99.89
KOG0294|consensus	362		99.89
KOG0303|consensus	472		99.89
KOG1063|consensus	764		99.89
KOG0270|consensus	463		99.88
KOG1408|consensus	1080		99.88
KOG1445|consensus	1012		99.88
KOG2106|consensus	626		99.87
KOG1034|consensus	385		99.87
KOG2445|consensus	361		99.87
KOG0302|consensus	440		99.87
KOG0322|consensus	323		99.86
KOG2055|consensus	514		99.86
KOG0650|consensus	733		99.86
KOG1273|consensus	405		99.85
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.85
KOG1009|consensus	434		99.85
KOG0642|consensus	577		99.85
KOG1034|consensus	385		99.84
KOG0307|consensus	1049		99.84
KOG0270|consensus	463		99.83
KOG0307|consensus	1049		99.83
KOG1517|consensus	1387		99.83
KOG1587|consensus	555		99.83
KOG1188|consensus	376		99.83
KOG1538|consensus	1081		99.82
COG2319	466	FOG: WD40 repeat [General function prediction only	99.82
KOG2048|consensus	691		99.81
KOG1007|consensus	370		99.81
COG2319	466	FOG: WD40 repeat [General function prediction only	99.81
PRK11028	330	6-phosphogluconolactonase; Provisional	99.79
KOG1445|consensus	1012		99.79
KOG1963|consensus	792		99.79
KOG0650|consensus	733		99.79
KOG0771|consensus	398		99.79
KOG4227|consensus	609		99.78
KOG4378|consensus	673		99.78
KOG4328|consensus	498		99.78
KOG1524|consensus	737		99.76
KOG0644|consensus	1113		99.75
KOG2394|consensus	636		99.75
KOG0303|consensus	472		99.75
KOG0290|consensus	364		99.75
KOG2110|consensus	391		99.75
KOG1007|consensus	370		99.74
KOG2919|consensus	406		99.74
KOG0321|consensus	720		99.73
KOG0290|consensus	364		99.72
PRK01742	429	tolB translocation protein TolB; Provisional	99.72
KOG1188|consensus	376		99.72
KOG0649|consensus	325		99.7
KOG0642|consensus	577		99.7
KOG0644|consensus	1113		99.69
KOG1523|consensus	361		99.69
KOG0322|consensus	323		99.69
KOG1240|consensus	1431		99.68
KOG1524|consensus	737		99.67
KOG0649|consensus	325		99.67
KOG1310|consensus	758		99.67
KOG0771|consensus	398		99.66
KOG1538|consensus	1081		99.66
KOG3881|consensus	412		99.66
KOG2110|consensus	391		99.65
KOG1272|consensus	545		99.65
KOG2111|consensus	346		99.65
KOG1009|consensus	434		99.64
KOG1963|consensus	792		99.64
PRK11028	330	6-phosphogluconolactonase; Provisional	99.64
PRK01742	429	tolB translocation protein TolB; Provisional	99.63
KOG1517|consensus	1387		99.62
KOG1523|consensus	361		99.62
PRK03629	429	tolB translocation protein TolB; Provisional	99.62
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.59
PRK04922	433	tolB translocation protein TolB; Provisional	99.59
KOG2111|consensus	346		99.56
KOG1272|consensus	545		99.56
KOG1334|consensus	559		99.56
PRK02889	427	tolB translocation protein TolB; Provisional	99.55
KOG1310|consensus	758		99.55
KOG1587|consensus	555		99.55
KOG4497|consensus	447		99.54
PRK05137	435	tolB translocation protein TolB; Provisional	99.53
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.5
KOG2139|consensus	445		99.49
KOG4227|consensus	609		99.49
KOG1240|consensus	1431		99.49
KOG4547|consensus	541		99.48
KOG2315|consensus	566		99.48
PRK05137	435	tolB translocation protein TolB; Provisional	99.47
PRK03629	429	tolB translocation protein TolB; Provisional	99.46
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.45
PRK02889	427	tolB translocation protein TolB; Provisional	99.45
PRK04922	433	tolB translocation protein TolB; Provisional	99.43
KOG0974|consensus	967		99.43
KOG3881|consensus	412		99.42
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.42
KOG2139|consensus	445		99.42
KOG1354|consensus	433		99.42
KOG2321|consensus	703		99.41
KOG2394|consensus	636		99.38
KOG2321|consensus	703		99.37
PRK00178	430	tolB translocation protein TolB; Provisional	99.37
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.37
KOG0974|consensus	967		99.37
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.36
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.33
KOG1409|consensus	404		99.32
KOG0280|consensus	339		99.32
KOG1334|consensus	559		99.3
PRK04792	448	tolB translocation protein TolB; Provisional	99.29
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.28
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.27
KOG1354|consensus	433		99.26
KOG1064|consensus	2439		99.25
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.25
KOG2041|consensus	1189		99.25
PRK01029	428	tolB translocation protein TolB; Provisional	99.24
KOG2314|consensus	698		99.2
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.2
KOG0309|consensus	1081		99.19
PRK00178	430	tolB translocation protein TolB; Provisional	99.18
KOG4190|consensus	1034		99.18
KOG4497|consensus	447		99.17
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.15
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.15
PRK04792	448	tolB translocation protein TolB; Provisional	99.14
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.1
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.08
PRK01029	428	tolB translocation protein TolB; Provisional	99.05
KOG2315|consensus	566		99.03
KOG4714|consensus	319		99.02
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.0
KOG0280|consensus	339		98.99
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.99
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.99
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.98
KOG1912|consensus	1062		98.98
KOG4547|consensus	541		98.96
KOG2695|consensus	425		98.95
KOG1409|consensus	404		98.95
KOG1064|consensus	2439		98.95
KOG3914|consensus	390		98.93
KOG4532|consensus	344		98.92
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.91
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.85
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.84
KOG4190|consensus	1034		98.82
COG4946	668	Uncharacterized protein related to the periplasmic	98.82
KOG1832|consensus	1516		98.82
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.82
KOG3914|consensus	390		98.8
KOG4532|consensus	344		98.8
KOG0309|consensus	1081		98.79
KOG1275|consensus	1118		98.75
KOG2695|consensus	425		98.75
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.75
PRK04043	419	tolB translocation protein TolB; Provisional	98.72
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.7
PRK04043	419	tolB translocation protein TolB; Provisional	98.67
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.65
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.64
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.63
KOG0882|consensus	558		98.63
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.59
COG4946	668	Uncharacterized protein related to the periplasmic	98.58
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.54
KOG2041|consensus	1189		98.52
KOG1275|consensus	1118		98.51
KOG1920|consensus	1265		98.49
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.46
KOG4714|consensus	319		98.45
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.45
KOG2314|consensus	698		98.44
KOG2114|consensus	933		98.42
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.4
KOG1912|consensus	1062		98.36
KOG2066|consensus	846		98.29
KOG2114|consensus	933		98.28
KOG4649|consensus	354		98.24
KOG1832|consensus	1516		98.22
KOG0882|consensus	558		98.17
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.13
KOG2066|consensus	846		98.1
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.01
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.98
KOG1645|consensus	463		97.93
PRK02888	635	nitrous-oxide reductase; Validated	97.89
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.87
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.85
KOG3617|consensus	1416		97.83
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.82
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.82
KOG3621|consensus	726		97.81
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.8
KOG1920|consensus	1265		97.76
KOG2395|consensus	644		97.7
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.66
KOG4640|consensus	665		97.65
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.57
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.57
KOG2444|consensus	238		97.53
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.53
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.52
PRK02888	635	nitrous-oxide reductase; Validated	97.49
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.45
KOG2444|consensus	238		97.45
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.4
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.39
KOG3621|consensus	726		97.36
KOG1645|consensus	463		97.33
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.31
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.3
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.22
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.19
KOG1008|consensus	783		97.12
KOG3617|consensus	1416		97.0
COG3391	381	Uncharacterized conserved protein [Function unknow	96.98
KOG4640|consensus	665		96.98
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.93
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.89
PHA02713	557	hypothetical protein; Provisional	96.85
KOG1008|consensus	783		96.81
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.76
KOG4649|consensus	354		96.75
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.73
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	96.73
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.64
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.44
KOG2079|consensus	1206		96.4
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.39
PRK13616	591	lipoprotein LpqB; Provisional	96.25
KOG4441|consensus	571		96.21
KOG2079|consensus	1206		96.14
PRK13616	591	lipoprotein LpqB; Provisional	96.07
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.0
KOG4441|consensus	571		95.89
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.73
KOG1897|consensus	1096		95.69
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	95.68
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.51
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.47
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.34
COG3391	381	Uncharacterized conserved protein [Function unknow	95.31
KOG2395|consensus	644		95.29
COG5167	776	VID27 Protein involved in vacuole import and degra	95.2
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	95.13
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.05
PHA02713	557	hypothetical protein; Provisional	95.03
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	95.02
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	95.0
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	94.97
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	94.87
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	94.84
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	94.81
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	94.55
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	94.23
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	94.1
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	93.83
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	93.7
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	93.33
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	93.31
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	93.07
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	92.97
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	92.92
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	92.88
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	92.44
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	92.36
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	91.95
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	91.8
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	91.79
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	91.76
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	91.59
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	91.32
KOG1916|consensus	1283		91.29
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	91.15
KOG4499|consensus	310		90.76
PHA03098	534	kelch-like protein; Provisional	90.71
KOG2247|consensus	615		90.12
KOG4460|consensus	741		89.59
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	89.22
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	89.13
PF13449	326	Phytase-like: Esterase-like activity of phytase	89.13
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	88.72
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	88.53
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	88.0
KOG4499|consensus	310		87.8
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	87.27
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	87.08
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	87.06
PHA03098	534	kelch-like protein; Provisional	86.95
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	86.26
PRK10115	686	protease 2; Provisional	85.3
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	85.06
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	84.45
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	84.32
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	83.96
PHA02790	480	Kelch-like protein; Provisional	83.36
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	82.76
COG4590	733	ABC-type uncharacterized transport system, permeas	82.58
KOG1900|consensus	1311		82.51
KOG1983|consensus	993		82.41
KOG1897|consensus	1096		81.59
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	81.5
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	81.48
PHA02790	480	Kelch-like protein; Provisional	81.01
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	80.95
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	80.59

>KOG0286|consensus

Probab=100.00  E-value=1.2e-51  Score=327.46  Aligned_cols=263  Identities=62%  Similarity=1.109  Sum_probs=243.6

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC--cccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+|||.-|..+.+.++++..||+.|+|+|.|+++|.||.|+.+.||++...+.  ......++.+|.+.+.|+.|.+ +.
T Consensus        79 lIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~  157 (343)
T KOG0286|consen   79 LIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DN  157 (343)
T ss_pred             EEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CC
Confidence            57999999999999999999999999999999999999999999999975522  2344567899999999999987 56


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      .|++++.|.+..+||+++++.+..|.+|.+.|.++++.|+ +++.+++|+.|+..+|||++.+.                
T Consensus       158 ~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~-~~ntFvSg~cD~~aklWD~R~~~----------------  220 (343)
T KOG0286|consen  158 HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS-DGNTFVSGGCDKSAKLWDVRSGQ----------------  220 (343)
T ss_pred             ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCC-CCCeEEecccccceeeeeccCcc----------------
Confidence            8999999999999999999999999999999999999876 78999999999999888887665                


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF  238 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  238 (320)
                                 +.++|.+|...|++++|+|+|.-+++|+.|+++++||++..+++..|.++...+++++++||..|++|.
T Consensus       221 -----------c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLf  289 (343)
T KOG0286|consen  221 -----------CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLF  289 (343)
T ss_pred             -----------eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEE
Confidence                       455667899999999999999999999999999999999999999999998889999999999999999


Q ss_pred             EEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       239 ~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +|+.|..+.+||...++++..+.+|++.|+||..+|||..++|||||.++|+|.
T Consensus       290 agy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  290 AGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             eeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            999999999999999999999999999999999999999999999999999995

>KOG0271|consensus

Probab=100.00  E-value=1e-48  Score=321.01  Aligned_cols=284  Identities=26%  Similarity=0.457  Sum_probs=251.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec-----C
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP-----N   75 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----~   75 (320)
                      ++|||+.|.+..+....|.+||.+++|+|||+.||+|+.||+|++||....   ......+.+|...|+++.|.     +
T Consensus       139 vR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg---~~~g~~l~gH~K~It~Lawep~hl~p  215 (480)
T KOG0271|consen  139 VRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTG---QQIGRALRGHKKWITALAWEPLHLVP  215 (480)
T ss_pred             EEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCC---CcccccccCcccceeEEeecccccCC
Confidence            479999999999999999999999999999999999999999999986432   23445788999999999994     3


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-  154 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-  154 (320)
                      ...++++++.||.|+|||+..+.++..+.+|..+|.|+.+.-   ..++++|+.|++|++|+...|.+.+.+.+|...+ 
T Consensus       216 ~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG---~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN  292 (480)
T KOG0271|consen  216 PCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG---EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVN  292 (480)
T ss_pred             CccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcC---CceEEecCCCceEEEEEccchhHHHhhcccchhee
Confidence            456899999999999999999999999999999999999853   2589999999999999998887776665554221 


Q ss_pred             --------------------------------------------------cCCCeEEEEECcC-CeeeeeecCCCCCeEE
Q psy14961        155 --------------------------------------------------TDDKLVNIWDMRT-GYCVQSFEGHQSDVNS  183 (320)
Q Consensus       155 --------------------------------------------------~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~  183 (320)
                                                                        ++|.++.+|+... .+++..+.+|+..|+.
T Consensus       293 ~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~  372 (480)
T KOG0271|consen  293 HLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNH  372 (480)
T ss_pred             eeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheee
Confidence                                                              2477899998744 5588889999999999


Q ss_pred             EEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC
Q psy14961        184 VKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH  263 (320)
Q Consensus       184 v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h  263 (320)
                      +.|+||++++|++|-|+.|++||-++++.+..+..+.  ..+..++|+.|.++|++|+.|.++++||+.+.+...-+.+|
T Consensus       373 V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv--~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh  450 (480)
T KOG0271|consen  373 VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHV--AAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGH  450 (480)
T ss_pred             EEECCCccEEEEeecccceeeeeCCCcchhhhhhhcc--ceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCC
Confidence            9999999999999999999999999999888777553  24678999999999999999999999999998888889999


Q ss_pred             CCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        264 ENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       264 ~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .++|.++.|+|||..+++|+.|+.+|+|.
T Consensus       451 ~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  451 ADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             CceEEEEEecCCCceeecCCCceEEEeec
Confidence            99999999999999999999999999995

>KOG0271|consensus

Probab=100.00  E-value=9.1e-48  Score=315.38  Aligned_cols=278  Identities=25%  Similarity=0.447  Sum_probs=243.2

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      .++..|.++|.+++|+|+|+.|++|+.|.++++||++.+    ....+..+|...|.|+.|+|+++.|++|+.||+|++|
T Consensus       109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te----Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw  184 (480)
T KOG0271|consen  109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE----TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW  184 (480)
T ss_pred             cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC----CcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence            345678899999999999999999999999999998643    2345678999999999999999999999999999999


Q ss_pred             ECCCccee-eecccCccceeEEEEee---CCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc--------------
Q psy14961         93 DVESSQLL-QSFHGHTGELMDLDLAP---SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI--------------  154 (320)
Q Consensus        93 d~~~~~~~-~~~~~~~~~v~~~~~~~---~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~--------------  154 (320)
                      |+.+++.+ ..+.+|...|.+++|.|   .+....|++++.||.+++||+..+.++..+.+|...+              
T Consensus       185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySg  264 (480)
T KOG0271|consen  185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSG  264 (480)
T ss_pred             cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEec
Confidence            99987654 67899999999999876   3566799999999999999999999999999998765              


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc-----------CCCC-------------------------EEEEeeC
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH-----------PSGD-------------------------AVATGSD  198 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~-----------p~g~-------------------------~l~s~s~  198 (320)
                      +.|++|++|+...|.+...+++|...|+.++++           |.++                         .|++|+.
T Consensus       265 S~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsD  344 (480)
T KOG0271|consen  265 SQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSD  344 (480)
T ss_pred             CCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecC
Confidence            358999999999999999999999999999887           3333                         4999999


Q ss_pred             CCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC
Q psy14961        199 DATCRLFDLRADK-EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT  277 (320)
Q Consensus       199 dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~  277 (320)
                      |.++.+|+....+ ++.....+..  -+..+.||||+.++|+++-|..|++||..+++.+.+|.+|.++|..++||.|.+
T Consensus       345 d~tlflW~p~~~kkpi~rmtgHq~--lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsR  422 (480)
T KOG0271|consen  345 DFTLFLWNPFKSKKPITRMTGHQA--LVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSR  422 (480)
T ss_pred             CceEEEecccccccchhhhhchhh--heeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCcc
Confidence            9999999875443 3333333322  357899999999999999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCceEeeecchH
Q psy14961        278 AFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       278 ~l~s~s~D~~ir~~~~~~~  296 (320)
                      +|+|||.|.|+++|+.+.+
T Consensus       423 LlVS~SkDsTLKvw~V~tk  441 (480)
T KOG0271|consen  423 LLVSGSKDSTLKVWDVRTK  441 (480)
T ss_pred             EEEEcCCCceEEEEEeeee
Confidence            9999999999999996443

>KOG0272|consensus

Probab=100.00  E-value=1.1e-46  Score=312.51  Aligned_cols=266  Identities=30%  Similarity=0.534  Sum_probs=237.8

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEEEEECCC
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~   96 (320)
                      ..+|..|.|++|++.|+|||.+|.++||...    .......+.+|.+.+.++.|.|.  +..+++|+.||++++|++++
T Consensus       175 ~rPis~~~fS~ds~~laT~swsG~~kvW~~~----~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~  250 (459)
T KOG0272|consen  175 TRPISGCSFSRDSKHLATGSWSGLVKVWSVP----QCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ  250 (459)
T ss_pred             CCcceeeEeecCCCeEEEeecCCceeEeecC----CcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC
Confidence            4578999999999999999999999999874    33556788999999999999886  45899999999999999999


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEE
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVN  161 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~  161 (320)
                      ..++..+.+|...|..++|+|  +|++|.+++-|.+-++||++++..+...+||...+               +-|..-+
T Consensus       251 e~~l~~l~gH~~RVs~VafHP--sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~R  328 (459)
T KOG0272|consen  251 ETPLQDLEGHLARVSRVAFHP--SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGR  328 (459)
T ss_pred             CcchhhhhcchhhheeeeecC--CCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhh
Confidence            899999999999999998876  59999999999999999999987665555655433               1355679


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec-CCcEEEEE
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV-SGRLLFAG  240 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g  240 (320)
                      +||+|++.++..+.+|..+|.+|+|+|+|..||+||.|++++|||++..+.+..++.+...  ++.+.|+| .|.+|+|+
T Consensus       329 vWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl--VS~Vk~~p~~g~fL~Ta  406 (459)
T KOG0272|consen  329 VWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL--VSQVKYSPQEGYFLVTA  406 (459)
T ss_pred             eeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccch--hhheEecccCCeEEEEc
Confidence            9999999999999999999999999999999999999999999999988776666655443  57899998 78899999


Q ss_pred             eCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       241 ~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +.|+++++|...+..++.++.||++.|-+++++||+..++|+|+|++||+|.
T Consensus       407 syD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  407 SYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             ccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            9999999999999999999999999999999999999999999999999995

>KOG0263|consensus

Probab=100.00  E-value=3.7e-40  Score=292.71  Aligned_cols=255  Identities=29%  Similarity=0.486  Sum_probs=224.5

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccC---------------------------Cccccccccccccc
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALED---------------------------DSSAKKKTVATHTS   66 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~---------------------------~~~~~~~~~~~h~~   66 (320)
                      .+......|+|+.|++|+++||.|-.|..|++|.+....                           .+.....++.+|.+
T Consensus       373 T~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~G  452 (707)
T KOG0263|consen  373 TFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSG  452 (707)
T ss_pred             EEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCC
Confidence            334445678999999999999999999999999876210                           01112335678999


Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~  146 (320)
                      +|..+.|+|+.++|+++++|+++|+|.+.+..++..+++|..+|+.+.|+|  .|-+|+|++.|++-++|.....     
T Consensus       453 PVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P--~GyYFatas~D~tArLWs~d~~-----  525 (707)
T KOG0263|consen  453 PVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP--RGYYFATASHDQTARLWSTDHN-----  525 (707)
T ss_pred             ceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC--CceEEEecCCCceeeeeecccC-----
Confidence            999999999999999999999999999999999999999999999999875  5999999999999999986443     


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                                            .+.+.+-+|-+.|.|++|||++.|+++||.|.++++||+.++..+..|..+..  .+.
T Consensus       526 ----------------------~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~--~V~  581 (707)
T KOG0263|consen  526 ----------------------KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKG--PVT  581 (707)
T ss_pred             ----------------------CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCC--ceE
Confidence                                  34555678999999999999999999999999999999999999998877654  468


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                      +++|||+|.+|++|++||.|.+||+.++.++.++.+|++.|.+|.||.||..||+||.|.++|+||.....-.
T Consensus       582 al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~  654 (707)
T KOG0263|consen  582 ALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL  654 (707)
T ss_pred             EEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999997665544

>KOG0279|consensus

Probab=100.00  E-value=3.3e-38  Score=249.50  Aligned_cols=276  Identities=25%  Similarity=0.412  Sum_probs=227.0

Q ss_pred             EEEEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcc-cccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         12 EHSVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSS-AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        12 ~~~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      ...+..|+.+|.+++..+. ...+.++++|..+.+|++...+... .....+.+|...|..+..++++++.++++.|+++
T Consensus         8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~l   87 (315)
T KOG0279|consen    8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTL   87 (315)
T ss_pred             eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceE
Confidence            3456789999999999876 5689999999999999997543332 3356788999999999999999999999999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC--Cc---------------
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH--HN---------------  152 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~--~~---------------  152 (320)
                      ++||+.+++..+.|.+|...|.++++.+  +...+++|+.|.+|++||.... |..+...+  .+               
T Consensus        88 rlWDl~~g~~t~~f~GH~~dVlsva~s~--dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p~  164 (315)
T KOG0279|consen   88 RLWDLATGESTRRFVGHTKDVLSVAFST--DNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNPI  164 (315)
T ss_pred             EEEEecCCcEEEEEEecCCceEEEEecC--CCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCcE
Confidence            9999999999999999999999888754  5689999999999999998643 22222211  11               


Q ss_pred             c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961        153 L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF  230 (320)
Q Consensus       153 ~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  230 (320)
                      +  .+.|+++++||+++.+....+.+|+.-++.++++|||..+++|++||.+.+||++.++.+..+....   .+.+++|
T Consensus       165 Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~---~v~sl~f  241 (315)
T KOG0279|consen  165 IVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFD---IVNSLCF  241 (315)
T ss_pred             EEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCC---eEeeEEe
Confidence            1  2469999999999999999999999999999999999999999999999999999998765544432   3678999


Q ss_pred             ecCCcEEEEEeCCCeEEEEcCCCCeEEEEee----cC-----CCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLM----GH-----ENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~----~h-----~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +|+--.|+.+... .|+|||+.+...+..+.    +.     .-...+++|++||..|++|-.|+.||+|+.+
T Consensus       242 spnrywL~~at~~-sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  242 SPNRYWLCAATAT-SIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             cCCceeEeeccCC-ceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            9998777666544 59999998876665543    22     2234788999999999999999999999864

>KOG0265|consensus

Probab=100.00  E-value=2.4e-38  Score=252.64  Aligned_cols=273  Identities=25%  Similarity=0.376  Sum_probs=229.6

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ..|+..|..+.|+|+|+.+++||.|..|.+|++..+.   .....+.+|.+.|.-+.|..++..+++++.|.+++.||++
T Consensus        44 ~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdc---eN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~  120 (338)
T KOG0265|consen   44 PGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDC---ENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE  120 (338)
T ss_pred             CCCcceEEEEEECCCCCeEeecCCcceEEEEeccccc---cceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecc
Confidence            4577889999999999999999999999999975332   2334567999999999999999999999999999999999


Q ss_pred             CcceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCCcEEEEeccCCc------------cc--cCCCeE
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN------------LI--TDDKLV  160 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~------------~~--~~d~~i  160 (320)
                      +++..+.++.|..-|..+.  |..-| .++.+++.|++++|||+++..+++++.....            .+  .-|+.|
T Consensus       121 tG~~~rk~k~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~i  198 (338)
T KOG0265|consen  121 TGKRIRKHKGHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDI  198 (338)
T ss_pred             cceeeehhccccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCce
Confidence            9999999999999888775  44334 4667899999999999997766555422111            11  237889


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC----eeEeEEecCcceee--eEEEEEecCC
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD----KEVACYKKDSILFG--ATSVDFSVSG  234 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~~~--~~~~~~s~~~  234 (320)
                      ++||++.+.....+.||.++|..+..+|+|.++.+-+.|.++++||++.-    +.+..+..+...+.  ...++|+|++
T Consensus       199 kvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~  278 (338)
T KOG0265|consen  199 KVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNG  278 (338)
T ss_pred             eeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCC
Confidence            99999999999999999999999999999999999999999999998753    22445544332222  3568899999


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +.+..|+.|..+.+||......+..+.||.+.|++++|+|....|.+++.|++|.+.+.
T Consensus       279 ~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei  337 (338)
T KOG0265|consen  279 TKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI  337 (338)
T ss_pred             CccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence            99999999999999999888888889999999999999999999999999999987654

>KOG0315|consensus

Probab=100.00  E-value=7.8e-38  Score=243.74  Aligned_cols=261  Identities=20%  Similarity=0.343  Sum_probs=216.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++|...++.+...+.-+...|+++...|+++.||+|+. -.|++||+...  ....+.++.+|..-|+++.|..+|..+
T Consensus        22 IRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~--np~Pv~t~e~h~kNVtaVgF~~dgrWM   98 (311)
T KOG0315|consen   22 IRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSN--NPNPVATFEGHTKNVTAVGFQCDGRWM   98 (311)
T ss_pred             eeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCC--CCCceeEEeccCCceEEEEEeecCeEE
Confidence            679999999999887777889999999999999999985 67999999643  233566889999999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      ++|++||+++|||+....+.+.++ |.++|.++.++|.  ...|++|.++|.|++||+....+...+-            
T Consensus        99 yTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpn--QteLis~dqsg~irvWDl~~~~c~~~li------------  163 (311)
T KOG0315|consen   99 YTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPN--QTELISGDQSGNIRVWDLGENSCTHELI------------  163 (311)
T ss_pred             EecCCCceEEEEeccCcccchhcc-CCCCcceEEecCC--cceEEeecCCCcEEEEEccCCccccccC------------
Confidence            999999999999998866655555 7799999988765  4579999999999999998765433221            


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE------EecCcceeeeEEEEEecCC
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC------YKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~------~~~~~~~~~~~~~~~s~~~  234 (320)
                                    +.....|.++...|+|.+++++..-|.+.+|++-.......      ++.+..  -+.++.+|||+
T Consensus       164 --------------Pe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~--~il~C~lSPd~  227 (311)
T KOG0315|consen  164 --------------PEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNG--HILRCLLSPDV  227 (311)
T ss_pred             --------------CCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccc--eEEEEEECCCC
Confidence                          11234688999999999999999999999999876543322      222221  25788999999


Q ss_pred             cEEEEEeCCCeEEEEcCCCC-eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        235 RLLFAGYNDYTINVWDSLKC-CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~-~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++||+++.|.+++||+.... .....+.+|..+++..+||.||++|++||.|.+.|+|+...
T Consensus       228 k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~  289 (311)
T KOG0315|consen  228 KYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSA  289 (311)
T ss_pred             cEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccccc
Confidence            99999999999999998776 45567889999999999999999999999999999999643

>KOG0284|consensus

Probab=100.00  E-value=8.9e-39  Score=264.44  Aligned_cols=267  Identities=24%  Similarity=0.420  Sum_probs=223.1

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ...|..+.|.|+|+.|++|+..|...+|+..    .......+..|+++|+++.|++++.++++|+.+|.|++|+.+-+.
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~----~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn  171 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGT----SFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN  171 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCc----eeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh
Confidence            3578999999999999999999999999752    222223457899999999999999999999999999999987655


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc---------------ccCCCeEEEE
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL---------------ITDDKLVNIW  163 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~---------------~~~d~~i~iw  163 (320)
                      .......|...|.+++|+|  +...|++++.||.|+|||....+.-+.+.+|.-.               .+.|..|++|
T Consensus       172 Vk~~~ahh~eaIRdlafSp--nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlW  249 (464)
T KOG0284|consen  172 VKIIQAHHAEAIRDLAFSP--NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLW  249 (464)
T ss_pred             hHHhhHhhhhhhheeccCC--CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEee
Confidence            4333333448999998876  4578999999999999999876654555555422               2468899999


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC-CcEEEEEeC
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS-GRLLFAGYN  242 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~  242 (320)
                      |.+++.|+.++.+|+..|..+.|+|++++|+++|+|..++++|+++-+.++.+..+..  .+.++.|+|- ..++++|+.
T Consensus       250 DprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkk--dv~~~~WhP~~~~lftsgg~  327 (464)
T KOG0284|consen  250 DPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKK--DVTSLTWHPLNESLFTSGGS  327 (464)
T ss_pred             cCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchh--hheeeccccccccceeeccC
Confidence            9999999999999999999999999999999999999999999998777777765543  3578889985 458888999


Q ss_pred             CCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        243 DYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       243 dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ||.|..|.+...+++..+ .+|...|++++|+|=|..|++||.|+++|+|..
T Consensus       328 Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  328 DGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             CCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence            999999987755555444 589999999999999999999999999999984

>KOG0272|consensus

Probab=100.00  E-value=1.4e-38  Score=264.37  Aligned_cols=232  Identities=29%  Similarity=0.447  Sum_probs=210.3

Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      -..++..+.|+.++..|+||+.+|.+++|+..+...++.|.+|.+.+.++.|+|..++..+++++.||++++|++.+...
T Consensus       174 d~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~  253 (459)
T KOG0272|consen  174 DTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETP  253 (459)
T ss_pred             CCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcc
Confidence            35778899999999999999999999999999999999999999999999999985567999999999999999988777


Q ss_pred             EEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC
Q psy14961        144 VQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR  208 (320)
Q Consensus       144 ~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~  208 (320)
                      +..+.+|...+               +.|.+-++||++++..+...+||...|.+++|+|||..+++|+.|..-+|||++
T Consensus       254 l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlR  333 (459)
T KOG0272|consen  254 LQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLR  333 (459)
T ss_pred             hhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecc
Confidence            77777665433               458889999999999888889999999999999999999999999999999999


Q ss_pred             CCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEecCCCc
Q psy14961        209 ADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTT  287 (320)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~  287 (320)
                      +++.+..+..+..  .+.+++|+|+|..||||+.|++++|||+.....+.++.+|.+-|+.+.|+| .|.+|+|||+|++
T Consensus       334 tgr~im~L~gH~k--~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t  411 (459)
T KOG0272|consen  334 TGRCIMFLAGHIK--EILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNT  411 (459)
T ss_pred             cCcEEEEeccccc--ceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcc
Confidence            9998887766533  467899999999999999999999999998888999999999999999999 7999999999999


Q ss_pred             eEeeecchHh
Q psy14961        288 LRDEESKNRY  297 (320)
Q Consensus       288 ir~~~~~~~~  297 (320)
                      +++|..+...
T Consensus       412 ~kiWs~~~~~  421 (459)
T KOG0272|consen  412 VKIWSTRTWS  421 (459)
T ss_pred             eeeecCCCcc
Confidence            9999976553

>KOG0285|consensus

Probab=100.00  E-value=1.4e-37  Score=253.56  Aligned_cols=270  Identities=21%  Similarity=0.432  Sum_probs=234.2

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +..|.+||.++++.|.++++++|+.|++|+|||+.    +...+.++.+|...|..+++++.-.++++++.|+.|++||+
T Consensus       147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDla----tg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDL  222 (460)
T KOG0285|consen  147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLA----TGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDL  222 (460)
T ss_pred             hhhccceEEEEeeCCCceeEEecCCCceeEEEEcc----cCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEec
Confidence            34688999999999999999999999999999996    34566788899999999999998999999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCe
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKL  159 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~  159 (320)
                      +.++.++.+.+|-+.|++++++|.  -+.|++|+.|..+++||+++...+..+.+|...+               +-|++
T Consensus       223 e~nkvIR~YhGHlS~V~~L~lhPT--ldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~t  300 (460)
T KOG0285|consen  223 EYNKVIRHYHGHLSGVYCLDLHPT--LDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDST  300 (460)
T ss_pred             hhhhhHHHhccccceeEEEecccc--ceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCce
Confidence            999999999999999999999875  4699999999999999999999999999987654               24889


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  239 (320)
                      |++||++.++...++..|...|.+++.+|....|||++.| .|+-|++..+..+..+..+..+  +.+++...|+ ++++
T Consensus       301 vrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~i--intl~~nsD~-v~~~  376 (460)
T KOG0285|consen  301 VRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAI--INTLSVNSDG-VLVS  376 (460)
T ss_pred             EEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccce--eeeeeeccCc-eEEE
Confidence            9999999999999999999999999999999999999998 4899999988877665555443  3566666665 7889


Q ss_pred             EeCCCeEEEEcCCCCeEEEEe---e-----cCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        240 GYNDYTINVWDSLKCCRVNHL---M-----GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~---~-----~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      |+.+|.+.+||..++.....+   .     ..+..|.+.+|...|..|+||..|++|++|...
T Consensus       377 G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  377 GGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             cCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence            999999999998776433222   1     235679999999999999999999999999853

>KOG0273|consensus

Probab=100.00  E-value=2e-36  Score=254.66  Aligned_cols=278  Identities=24%  Similarity=0.421  Sum_probs=227.4

Q ss_pred             EEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccc----ccc--ccc----cccCeEEEEecCCCCEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAK----KKT--VAT----HTSFISCCIFPNSDQQILT   82 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~----~~~--~~~----h~~~v~~~~~~~~~~~l~s   82 (320)
                      .+.-|+..|.+++|.|-.. .+++|+.|-..++|++.-.......    ...  +.+    ....|+++.|+.+|..|++
T Consensus       173 kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat  252 (524)
T KOG0273|consen  173 KVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT  252 (524)
T ss_pred             eeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence            3334788999999999665 8999999999999998521000001    000  111    2356999999999999999


Q ss_pred             EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc---------
Q psy14961         83 GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL---------  153 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~---------  153 (320)
                      |+.||.++||+.. +.++..+..|+++|.++.+  +.+|++|++++.|+++.+||..++.+.+.+.-|...         
T Consensus       253 G~~~G~~riw~~~-G~l~~tl~~HkgPI~slKW--nk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~  329 (524)
T KOG0273|consen  253 GSEDGEARIWNKD-GNLISTLGQHKGPIFSLKW--NKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN  329 (524)
T ss_pred             eecCcEEEEEecC-chhhhhhhccCCceEEEEE--cCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC
Confidence            9999999999964 6777889999999999988  457899999999999999999998887766544432         


Q ss_pred             ---c--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961        154 ---I--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV  228 (320)
Q Consensus       154 ---~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  228 (320)
                         +  ..|+.|+++.+....++.++.+|..+|+++.|+|.|..|+++|.|++++||+.........+..+.  ..+..+
T Consensus       330 ~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hs--kei~t~  407 (524)
T KOG0273|consen  330 DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHS--KEIYTI  407 (524)
T ss_pred             ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhc--cceeeE
Confidence               1  357889999998889999999999999999999999999999999999999976655443332222  134567


Q ss_pred             EEecC---------CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        229 DFSVS---------GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       229 ~~s~~---------~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .|+|+         +..+++++.|++|++||+.++.++..|..|..+|.+++|||+|+++|+|+.|+.+.+|..+..
T Consensus       408 ~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~  484 (524)
T KOG0273|consen  408 KWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG  484 (524)
T ss_pred             eecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch
Confidence            77775         457999999999999999999999999999999999999999999999999999999996443

>KOG0295|consensus

Probab=100.00  E-value=9.2e-37  Score=249.22  Aligned_cols=272  Identities=24%  Similarity=0.442  Sum_probs=242.8

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..+...|+.+-|+|+-.++++++.|++|++||....    .....+.+|...+..+.|...|.++++++.|-.+++||
T Consensus       103 ~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg----~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd  178 (406)
T KOG0295|consen  103 KLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETG----ELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWD  178 (406)
T ss_pred             hhhccccceeeeeeccCceEEEEecCCceEEEEEccch----hhhhhhhccccceeEEEEecCccEEEecCCccchhhee
Confidence            34456778999999999999999999999999998643    33567889999999999999999999999999999999


Q ss_pred             CCC-cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCC
Q psy14961         94 VES-SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDD  157 (320)
Q Consensus        94 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d  157 (320)
                      .++ .++++.+.+|...|.++.+-|.  |++++|++.|.+|+.|++.++.|+.++.+|...+               +.|
T Consensus       179 ~~~~~~c~ks~~gh~h~vS~V~f~P~--gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~d  256 (406)
T KOG0295|consen  179 FDTFFRCIKSLIGHEHGVSSVFFLPL--GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSND  256 (406)
T ss_pred             HHHHHHHHHHhcCcccceeeEEEEec--CCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCC
Confidence            987 5677788899999999988775  7899999999999999999999999999887543               357


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCC----------C-----CEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS----------G-----DAVATGSDDATCRLFDLRADKEVACYKKDSIL  222 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~----------g-----~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~  222 (320)
                      .++++|-..+++|...+..|..+|.+++|-|.          +     .++.+++.|++|++||+.++..+.....+.. 
T Consensus       257 qtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdn-  335 (406)
T KOG0295|consen  257 QTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDN-  335 (406)
T ss_pred             ceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccc-
Confidence            78999999999999999999999999999773          2     4899999999999999999988877665543 


Q ss_pred             eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                       .+..++|+|-|+||+++..|+++++||+...+...++.+|+..|+++.|+.+-.+++|||-|.++++|+.
T Consensus       336 -wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  336 -WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             -eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence             4688999999999999999999999999999999999999999999999999999999999999999985

>KOG0266|consensus

Probab=100.00  E-value=3.9e-35  Score=264.81  Aligned_cols=271  Identities=31%  Similarity=0.545  Sum_probs=236.3

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC-CCc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV-ESS   97 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~-~~~   97 (320)
                      ...|.++.|+++|+++++++.|+.+++|+......  ....++.+|...|..+.|+++++++++++.|++++|||+ ..+
T Consensus       159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~  236 (456)
T KOG0266|consen  159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG  236 (456)
T ss_pred             cCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--hhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC
Confidence            46788999999999999999999999999843221  234556789999999999999999999999999999999 556


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEE
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNI  162 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~i  162 (320)
                      ..++.+++|...|++++|+|  +|+.+++|+.|+.|++||++++.++..+.+|...+               +.|+.|++
T Consensus       237 ~~~~~l~gH~~~v~~~~f~p--~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~v  314 (456)
T KOG0266|consen  237 RNLKTLKGHSTYVTSVAFSP--DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRV  314 (456)
T ss_pred             eEEEEecCCCCceEEEEecC--CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEE
Confidence            88899999999999998865  57899999999999999999999999998887554               35899999


Q ss_pred             EECcCCe--eeeeecCCCCC--eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-eeeEEEEEecCCcEE
Q psy14961        163 WDMRTGY--CVQSFEGHQSD--VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-FGATSVDFSVSGRLL  237 (320)
Q Consensus       163 wd~~~~~--~~~~~~~~~~~--v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l  237 (320)
                      ||+.++.  +...+.++...  +.+++|+|++.++++++.|+.+++||++.+.....+..+... .++.+...++.++++
T Consensus       315 wd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  394 (456)
T KOG0266|consen  315 WDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLI  394 (456)
T ss_pred             EECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeE
Confidence            9999998  66777776655  999999999999999999999999999988777766655442 345556668899999


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEEeecC-CCceeEEEECcCCCeEEEec--CCCceEeeec
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNHLMGH-ENRVSCLQVSPDGTAFSSGS--WDTTLRDEES  293 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~~~~h-~~~i~~i~~s~~~~~l~s~s--~D~~ir~~~~  293 (320)
                      ++|+.|+.|.+||..++..+..+.+| ...+..++++|...++++++  .|+.+++|..
T Consensus       395 ~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~  453 (456)
T KOG0266|consen  395 YSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY  453 (456)
T ss_pred             EEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence            99999999999999988888889999 89999999999999999999  7999999975

>KOG0318|consensus

Probab=100.00  E-value=1e-34  Score=247.35  Aligned_cols=294  Identities=24%  Similarity=0.344  Sum_probs=210.6

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc---ccccCeEEEEecCCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA---THTSFISCCIFPNSDQ   78 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~   78 (320)
                      .++.....++......|..+|.++.|+|||+++++++.||.+.+||-.    ......++.   +|++.|.++.|+|++.
T Consensus       173 ~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGk----tge~vg~l~~~~aHkGsIfalsWsPDs~  248 (603)
T KOG0318|consen  173 AFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGK----TGEKVGELEDSDAHKGSIFALSWSPDST  248 (603)
T ss_pred             EEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCC----CccEEEEecCCCCccccEEEEEECCCCc
Confidence            355666666666677788999999999999999999999999999853    333344444   8999999999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCcc-------------ceeEEEE----------------------------ee
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTG-------------ELMDLDL----------------------------AP  117 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-------------~v~~~~~----------------------------~~  117 (320)
                      ++++++.|.+++|||+.++++++++.....             .+..+.+                            ..
T Consensus       249 ~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv  328 (603)
T KOG0318|consen  249 QFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTV  328 (603)
T ss_pred             eEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEE
Confidence            999999999999999999887776642211             0111100                            01


Q ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-ccCCccc--------------cCCCeEEEEECcCCe------------e
Q psy14961        118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EGHHNLI--------------TDDKLVNIWDMRTGY------------C  170 (320)
Q Consensus       118 ~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~~~~~~~--------------~~d~~i~iwd~~~~~------------~  170 (320)
                      ++++.+|++|+.||.|.-||..++.+-+.. ++|.+.+              +-|.++++.++....            +
T Consensus       329 ~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP  408 (603)
T KOG0318|consen  329 SPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQP  408 (603)
T ss_pred             cCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCc
Confidence            456677888888888888887665433211 2222211              123344444321100            0


Q ss_pred             -------------------eeeecCC--------CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        171 -------------------VQSFEGH--------QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       171 -------------------~~~~~~~--------~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                                         +..+..+        .-...+++++|++..++.|+.|+.+++|.+........-.......
T Consensus       409 ~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a  488 (603)
T KOG0318|consen  409 KGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRA  488 (603)
T ss_pred             eeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccC
Confidence                               0011111        1134689999999999999999999999997654322211111223


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                      .++.+++|||++|||+|...+.+.+||..+.+......+ |++.|++|+|+|+++++||||.|-.|.+|+.+.+...
T Consensus       489 ~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~  565 (603)
T KOG0318|consen  489 AITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH  565 (603)
T ss_pred             CceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh
Confidence            468999999999999999999999999988776544444 9999999999999999999999999999998877654

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=3.5e-34  Score=242.82  Aligned_cols=270  Identities=34%  Similarity=0.597  Sum_probs=229.4

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +..|...|.+++|+|++++|++++.||.+++|++....    ....+..|...+..+.|.++++.+++++.||.+++|++
T Consensus         5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~   80 (289)
T cd00200           5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE----LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL   80 (289)
T ss_pred             hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC----cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence            44678899999999999999999999999999985322    33445678888889999998889999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------------cc-CCCe
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--------------IT-DDKL  159 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--------------~~-~d~~  159 (320)
                      .+++.+..+..|...+.++.+.+.  ++++++++.|+.+++||+++++....+..+...              .. .++.
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~  158 (289)
T cd00200          81 ETGECVRTLTGHTSYVSSVAFSPD--GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGT  158 (289)
T ss_pred             CcccceEEEeccCCcEEEEEEcCC--CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCc
Confidence            988888888888888988887654  678888888999999999877766665544321              12 3889


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  239 (320)
                      +++||++++++...+..|...|.+++|+|+++.+++++.|+.+++||++.++.+..+..+..  .+..+.|+|++.++++
T Consensus       159 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~  236 (289)
T cd00200         159 IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHEN--GVNSVAFSPDGYLLAS  236 (289)
T ss_pred             EEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCC--ceEEEEEcCCCcEEEE
Confidence            99999999888888889999999999999999999999999999999988776655533221  4578899999999999


Q ss_pred             EeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        240 GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ++.+|.+.+||.........+.+|...|.+++|+|++++|++++.|+.+++|+
T Consensus       237 ~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         237 GSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            88899999999988888888889999999999999999999999999999996

>KOG0282|consensus

Probab=100.00  E-value=8.5e-37  Score=257.65  Aligned_cols=277  Identities=26%  Similarity=0.405  Sum_probs=227.9

Q ss_pred             eEEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         11 KEHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      .++....|+..|+++.|.| .+.+|++++.|+.|+||++-.   ...+..++.+|..+|..+.|+.++..+++++.|+.+
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~---~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~l  282 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD---DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFL  282 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEec---CcceehhhhcchhhhhhhhccccCCeeeeeecceee
Confidence            4455678899999999999 899999999999999999853   345678899999999999999999999999999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc---------------cc
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN---------------LI  154 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~---------------~~  154 (320)
                      ++||+++|+++..+. -...+.++.++|+. .+.|++|+.|+.|+.||+++++.++.+..|-.               ..
T Consensus       283 KlwDtETG~~~~~f~-~~~~~~cvkf~pd~-~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFiss  360 (503)
T KOG0282|consen  283 KLWDTETGQVLSRFH-LDKVPTCVKFHPDN-QNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISS  360 (503)
T ss_pred             eeeccccceEEEEEe-cCCCceeeecCCCC-CcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeee
Confidence            999999999998876 34567788888764 48999999999999999999976554433321               12


Q ss_pred             cCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE---eEEecCcceeeeEEEEE
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV---ACYKKDSILFGATSVDF  230 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~  230 (320)
                      ++|+.+++|+.+..-++..+. .+.....++..+|+++++++-+.|+.|.++.+...-.+   ..++.+........+.|
T Consensus       361 SDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~f  440 (503)
T KOG0282|consen  361 SDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDF  440 (503)
T ss_pred             ccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEE
Confidence            578999999998765554332 22234568999999999999999999999986543222   12333333333568999


Q ss_pred             ecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcC-CCeEEEecCCCceEeee
Q psy14961        231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~  292 (320)
                      ||||.+|++|..+|.+.+||..+...+..+.+|+.++..+.|+|. ...+|+||+||.|++|+
T Consensus       441 SpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  441 SPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             cCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            999999999999999999999999999999999999999999994 56799999999999996

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=8.9e-34  Score=273.36  Aligned_cols=272  Identities=18%  Similarity=0.278  Sum_probs=214.4

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc----cccccccccccCeEEEEecC-CCCEEEEEeCCCeEEE
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS----AKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCAL   91 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~i   91 (320)
                      .|...|.+++|+|+|++|++|+.|+.|++|++.......    .....+ .+...+.++.|.+ .+..|++++.||+|++
T Consensus       481 ~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~las~~~Dg~v~l  559 (793)
T PLN00181        481 NSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRSKLSGICWNSYIKSQVASSNFEGVVQV  559 (793)
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEe-cccCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence            467889999999999999999999999999974211000    011122 2345678888865 4678999999999999


Q ss_pred             EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc---------------cccC
Q psy14961         92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN---------------LITD  156 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~---------------~~~~  156 (320)
                      ||+.+++.+..+.+|.+.|.++++++. ++.+|++|+.|+.|++||++++.++..+..+..               ..+.
T Consensus       560 Wd~~~~~~~~~~~~H~~~V~~l~~~p~-~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~  638 (793)
T PLN00181        560 WDVARSQLVTEMKEHEKRVWSIDYSSA-DPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSA  638 (793)
T ss_pred             EECCCCeEEEEecCCCCCEEEEEEcCC-CCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeC
Confidence            999999988999999999999998753 468999999999999999998877665543211               1236


Q ss_pred             CCeEEEEECcCCe-eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC------eeEeEEecCcceeeeEEEE
Q psy14961        157 DKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD------KEVACYKKDSILFGATSVD  229 (320)
Q Consensus       157 d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~  229 (320)
                      |+.|++||+++.. ++..+.+|...|.+++|. ++.++++++.|++|++||++..      ..+..+..+..  .+..+.
T Consensus       639 dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~--~i~~v~  715 (793)
T PLN00181        639 DHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTN--VKNFVG  715 (793)
T ss_pred             CCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCC--CeeEEE
Confidence            8899999998765 567788999999999997 6789999999999999999743      23333333322  246788


Q ss_pred             EecCCcEEEEEeCCCeEEEEcCCCCeEEEE-------------eecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNH-------------LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~-------------~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      |+|++.+|++|+.|+.|.+|+.....++..             ...|...|.+++|+|++.+|++|+.||+|++|++
T Consensus       716 ~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        716 LSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             EcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            999999999999999999999765433321             1235567999999999999999999999999985

>KOG0296|consensus

Probab=100.00  E-value=4.5e-34  Score=233.62  Aligned_cols=282  Identities=20%  Similarity=0.302  Sum_probs=227.1

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      +||+..++........|...|+++.|+.+|.+||||+.+|.++||+......    ...+...-..+.=+.|.|.+..|+
T Consensus        89 flW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~----~~~~~~e~~dieWl~WHp~a~ill  164 (399)
T KOG0296|consen   89 FLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGE----QWKLDQEVEDIEWLKWHPRAHILL  164 (399)
T ss_pred             EEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCce----EEEeecccCceEEEEecccccEEE
Confidence            5999999999999999999999999999999999999999999999864322    222322223344456778889999


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc------c-
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL------I-  154 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~------~-  154 (320)
                      +|+.||.+-+|.+..+...+.+.+|..++.+-.|.|  +|+.++++..||+|++||+.+++++....+....      + 
T Consensus       165 AG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p--dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~  242 (399)
T KOG0296|consen  165 AGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP--DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLN  242 (399)
T ss_pred             eecCCCcEEEEECCCcceeeEecCCCCCcccccccC--CCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccc
Confidence            999999999999998888899999999999888865  5999999999999999999999988766522111      0 


Q ss_pred             ---------cCCCeEEEEECcCCeeeeeec--------CCCCCeEEEEEcCC---CCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961        155 ---------TDDKLVNIWDMRTGYCVQSFE--------GHQSDVNSVKFHPS---GDAVATGSDDATCRLFDLRADKEVA  214 (320)
Q Consensus       155 ---------~~d~~i~iwd~~~~~~~~~~~--------~~~~~v~~v~~~p~---g~~l~s~s~dg~i~iwd~~~~~~~~  214 (320)
                               ..++.+++-...+++.+....        .+...+.|+.+.|.   -...|+|+.||+|.|||+...+...
T Consensus       243 ~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~  322 (399)
T KOG0296|consen  243 LAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRH  322 (399)
T ss_pred             cccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhhe
Confidence                     134445555555555443333        35555666666654   4567899999999999998776655


Q ss_pred             EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ...+..   ++.++.|-+ ..+|++++.+|.|+.||.++++...++.||..+|.+++.+|+.++++|+|.|++.++++.
T Consensus       323 ~c~he~---~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v  397 (399)
T KOG0296|consen  323 ICEHED---GVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEV  397 (399)
T ss_pred             eccCCC---ceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence            544443   367889988 789999999999999999999999999999999999999999999999999999999875

>KOG0291|consensus

Probab=100.00  E-value=1.1e-33  Score=250.03  Aligned_cols=285  Identities=21%  Similarity=0.356  Sum_probs=232.9

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      ++.......++.+......|..++|+..|..||-|+. -|.+-||+...+  ..  .-...+|...+.|+.++|+|++++
T Consensus       291 LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE--sY--VlKQQgH~~~i~~l~YSpDgq~ia  366 (893)
T KOG0291|consen  291 LYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE--SY--VLKQQGHSDRITSLAYSPDGQLIA  366 (893)
T ss_pred             EEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecc--ce--eeeccccccceeeEEECCCCcEEE
Confidence            5666667777887777788999999999999999865 488999987432  22  223468999999999999999999


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc---------
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN---------  152 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~---------  152 (320)
                      +|++||.|+|||...+-+..+|..|.+.|..+.|+.  .|+.+++++-||+|+.||+...++.++|.....         
T Consensus       367 TG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~--~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD  444 (893)
T KOG0291|consen  367 TGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTA--RGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVD  444 (893)
T ss_pred             eccCCCcEEEEeccCceEEEEeccCCCceEEEEEEe--cCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEc
Confidence            999999999999999999999999999999998865  488999999999999999988888777753321         


Q ss_pred             ----ccc----CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe-eEeEEecCccee
Q psy14961        153 ----LIT----DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK-EVACYKKDSILF  223 (320)
Q Consensus       153 ----~~~----~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~  223 (320)
                          ++.    +.-.|.+|++++|+.+-.+.||.++|.+++|+|.+..|+|+|.|++|++||+-... .+..++..   -
T Consensus       445 ~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~---s  521 (893)
T KOG0291|consen  445 PSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIR---S  521 (893)
T ss_pred             CCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeec---c
Confidence                111    12358999999999999999999999999999999999999999999999985432 22222211   1


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe--------------------ecCCCceeEEEECcCCCeEEEec
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL--------------------MGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~--------------------~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      .+..++|+|+|+-|++++-||.|.+||.........+                    .+.....+.|++|+||..+++||
T Consensus       522 dvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG  601 (893)
T KOG0291|consen  522 DVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGG  601 (893)
T ss_pred             ceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecC
Confidence            3578999999999999999999999997654433221                    12346799999999999999999


Q ss_pred             CCCceEeeecchH
Q psy14961        284 WDTTLRDEESKNR  296 (320)
Q Consensus       284 ~D~~ir~~~~~~~  296 (320)
                      ....|.+++..+.
T Consensus       602 ~sn~iCiY~v~~~  614 (893)
T KOG0291|consen  602 ESNSICIYDVPEG  614 (893)
T ss_pred             CcccEEEEECchh
Confidence            9999999996544

>KOG0286|consensus

Probab=100.00  E-value=9.2e-34  Score=225.73  Aligned_cols=246  Identities=22%  Similarity=0.366  Sum_probs=210.0

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +..|...|.++.|++|.++|++++.||.+.|||.-    ...+...++.....|-.++|+|.++++++|+-|+...||++
T Consensus        51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~----TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l  126 (343)
T KOG0286|consen   51 LKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSF----TTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL  126 (343)
T ss_pred             ecccccceeeeEecCCcCeEEeeccCCeEEEEEcc----cccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence            45688899999999999999999999999999964    22334455566778889999999999999999999999999


Q ss_pred             CCc------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCC
Q psy14961         95 ESS------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG  168 (320)
Q Consensus        95 ~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~  168 (320)
                      .+.      +..+.+.+|.+-+.++.|..   ...|++++.|.++.+||+++++.                         
T Consensus       127 s~~d~~g~~~v~r~l~gHtgylScC~f~d---D~~ilT~SGD~TCalWDie~g~~-------------------------  178 (343)
T KOG0286|consen  127 STRDAEGNVRVSRELAGHTGYLSCCRFLD---DNHILTGSGDMTCALWDIETGQQ-------------------------  178 (343)
T ss_pred             ccccccccceeeeeecCccceeEEEEEcC---CCceEecCCCceEEEEEcccceE-------------------------
Confidence            754      34567889999999888754   35799999999999998877654                         


Q ss_pred             eeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        169 YCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       169 ~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                        ++.|.+|...|.+++++| +++.+++|+-|+..++||++.+...+.|..+..  .+.++.|.|+|.-+++|+.|++.+
T Consensus       179 --~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes--DINsv~ffP~G~afatGSDD~tcR  254 (343)
T KOG0286|consen  179 --TQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES--DINSVRFFPSGDAFATGSDDATCR  254 (343)
T ss_pred             --EEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccccc--ccceEEEccCCCeeeecCCCceeE
Confidence              455668999999999999 899999999999999999999988888876654  578999999999999999999999


Q ss_pred             EEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        248 VWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       248 ~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +||++..+.+..+...  ..+|++++||..|++|+.|-.|.++-+||+...
T Consensus       255 lyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~  305 (343)
T KOG0286|consen  255 LYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKG  305 (343)
T ss_pred             EEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecccc
Confidence            9999887777655522  348999999999999999999999999996443

>KOG0293|consensus

Probab=100.00  E-value=4.9e-35  Score=242.71  Aligned_cols=275  Identities=22%  Similarity=0.333  Sum_probs=218.9

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ..|.+-|+=+.||++|++||+|++|.+.-+|++..... .....++.+|..+|.-+.|+|++.++++++.|..+.+||+.
T Consensus       221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~-~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~  299 (519)
T KOG0293|consen  221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH-FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVD  299 (519)
T ss_pred             hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc-eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCC
Confidence            45778899999999999999999999999999864433 55677889999999999999999999999999999999999


Q ss_pred             Ccceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec---------------cCC-ccccCCC
Q psy14961         96 SSQLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE---------------GHH-NLITDDK  158 (320)
Q Consensus        96 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~---------------~~~-~~~~~d~  158 (320)
                      ++.+...++. +...+.+++|.|  ||..+++|+.|+.|..||+.... ...++               +.. ..+..|.
T Consensus       300 tgd~~~~y~~~~~~S~~sc~W~p--Dg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~  376 (519)
T KOG0293|consen  300 TGDLRHLYPSGLGFSVSSCAWCP--DGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLLVTVDK  376 (519)
T ss_pred             cchhhhhcccCcCCCcceeEEcc--CCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEEEeccc
Confidence            9988766642 346677777865  68899999999999999986432 11111               111 1234567


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-eeeEEEEEecCCcEE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-FGATSVDFSVSGRLL  237 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l  237 (320)
                      .|++++.++......+ ....+|++++.|.+|++++.-=.+..+++||+...+.+..+..+... +-+.++-=.-+.+++
T Consensus       377 ~i~l~~~e~~~dr~li-se~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fi  455 (519)
T KOG0293|consen  377 KIRLYNREARVDRGLI-SEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFI  455 (519)
T ss_pred             ceeeechhhhhhhccc-cccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceE
Confidence            7888877655443222 23458999999999999888888999999999977666655544322 334444223466899


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecch
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++|++|+.|.||+..++.++..+.||...|++++|+| |..||||||.|||||+|-...
T Consensus       456 aSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  456 ASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             EecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            9999999999999999999999999999999999999 788999999999999998543

>KOG0279|consensus

Probab=100.00  E-value=4.3e-34  Score=226.20  Aligned_cols=246  Identities=25%  Similarity=0.407  Sum_probs=198.9

Q ss_pred             CeEeeccc-----ceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          1 MIIWDGLT-----QTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~-----~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      +++|++..     +.-...++.|...|..++.++||++.++++.|+++++||+...    ...+.+.+|...|.+++|++
T Consensus        40 ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g----~~t~~f~GH~~dVlsva~s~  115 (315)
T KOG0279|consen   40 IIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATG----ESTRRFVGHTKDVLSVAFST  115 (315)
T ss_pred             EEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCC----cEEEEEEecCCceEEEEecC
Confidence            35787553     2234467789999999999999999999999999999998642    34456889999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      +...+++|++|++|++|++............ .+.|.++.|+|.++...|+++++|+.+++||+++.+....+.+|...+
T Consensus       116 dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v  195 (315)
T KOG0279|consen  116 DNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYV  195 (315)
T ss_pred             CCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccE
Confidence            9999999999999999998765544333322 678999999998877899999999999999999988777777766543


Q ss_pred             ---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC
Q psy14961        155 ---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       155 ---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~  219 (320)
                                     ..|+.+.+||++.+++++++. |...|++++|+|+...|+.+. +..|+|||+.++..+..+..+
T Consensus       196 ~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d  273 (315)
T KOG0279|consen  196 NTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLD  273 (315)
T ss_pred             EEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhcccc
Confidence                           247889999999999988775 788999999999866665554 456999999987765544332


Q ss_pred             cc-------eeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        220 SI-------LFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       220 ~~-------~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      ..       ..-+.+++|++||+.|+.|+.|+.|++|.+.
T Consensus       274 ~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  274 GIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             ccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            11       1235789999999999999999999999753

>KOG0295|consensus

Probab=100.00  E-value=6.8e-35  Score=238.33  Aligned_cols=244  Identities=25%  Similarity=0.428  Sum_probs=214.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++||.+|++..-.+..|++.|..+.|+..|++|++++.|=.+++||++.   ...+.+.+.+|+..|.++.|-|.+.++
T Consensus       132 ikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~---~~~c~ks~~gh~h~vS~V~f~P~gd~i  208 (406)
T KOG0295|consen  132 IKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT---FFRCIKSLIGHEHGVSSVFFLPLGDHI  208 (406)
T ss_pred             EEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHH---HHHHHHHhcCcccceeeEEEEecCCee
Confidence            68999999999888889999999999999999999999999999999852   345566778999999999998889999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------  154 (320)
                      +++++|.+|+.|+..++-++.++.+|...|..+..  ..||..+++++.|..+++|=+.+++|...+..|...+      
T Consensus       209 lS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v--~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wa  286 (406)
T KOG0295|consen  209 LSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRV--NQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWA  286 (406)
T ss_pred             eecccccceeEEecccceeEEeccCchHhEEEEEe--cCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEec
Confidence            99999999999999999999999999998877654  6789999999999999999999886655444433221      


Q ss_pred             ------------------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        155 ------------------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       155 ------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                                              +.|++|++||+.++.|+.++.+|...|..++|+|.|+||+|+..|+++++||++..
T Consensus       287 p~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~  366 (406)
T KOG0295|consen  287 PESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL  366 (406)
T ss_pred             ccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc
Confidence                                    24889999999999999999999999999999999999999999999999999998


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      +.+.....+..  -+++++|+.+..++++|+.|.++++|..
T Consensus       367 ~cmk~~~ah~h--fvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  367 QCMKTLEAHEH--FVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             eeeeccCCCcc--eeEEEecCCCCceEEeccccceeeeeec
Confidence            87766654433  3578999999999999999999999963

>KOG0316|consensus

Probab=100.00  E-value=6.2e-34  Score=220.38  Aligned_cols=274  Identities=22%  Similarity=0.306  Sum_probs=227.2

Q ss_pred             eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      ....+..+..+|.++.|..||+|.++++.|.++++|+.    ......+++.+|...|..+..+.+...+++|+.|+.+.
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp----~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~   84 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNP----LRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQ   84 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCCCceEEeecc----cccceeeeecCCCceeeeccccccccccccCCCCceEE
Confidence            33445678899999999999999999999999999975    35567788999999999998888889999999999999


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC--cEEEEecc------------CCcc-cc
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG--YCVQSFEG------------HHNL-IT  155 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~--~~~~~~~~------------~~~~-~~  155 (320)
                      +||+++++.++.+.+|.+.|..+.|.  .+...+++|+-|.++++||.++.  ++++.+..            |..+ .+
T Consensus        85 vwDV~TGkv~Rr~rgH~aqVNtV~fN--eesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS  162 (307)
T KOG0316|consen   85 VWDVNTGKVDRRFRGHLAQVNTVRFN--EESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGS  162 (307)
T ss_pred             EEEcccCeeeeecccccceeeEEEec--CcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeec
Confidence            99999999999999999999999885  44679999999999999999764  34443322            2211 14


Q ss_pred             CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR  235 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  235 (320)
                      .||+++.||++.|.......+|  +|+|++|+++++..++++.|+++++.|-.+++.+..+..+...---..+.++....
T Consensus       163 ~DGtvRtydiR~G~l~sDy~g~--pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdt  240 (307)
T KOG0316|consen  163 VDGTVRTYDIRKGTLSSDYFGH--PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDT  240 (307)
T ss_pred             cCCcEEEEEeecceeehhhcCC--cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccce
Confidence            6999999999999877655444  89999999999999999999999999999999888777655432234567888889


Q ss_pred             EEEEEeCCCeEEEEcCCCCeEEEEeecCCCc-eeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENR-VSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~-i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+++|++||.|.+||+.....+..+..|... |..++++|.-.-|++|.. +.+..|..
T Consensus       241 hV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~~  298 (307)
T KOG0316|consen  241 HVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWYQ  298 (307)
T ss_pred             eEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceeceee
Confidence            9999999999999999998888888888887 899999997666666643 44555554

>KOG0645|consensus

Probab=100.00  E-value=6.8e-33  Score=218.62  Aligned_cols=272  Identities=22%  Similarity=0.357  Sum_probs=215.3

Q ss_pred             EEEEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         12 EHSVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        12 ~~~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      ...+..|...|+.++|+|. |.+||++|.|+.|++|+... ..+..++..+ .+|+..|++++|+|.+++|++|+.|.++
T Consensus         7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~-~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~   85 (312)
T KOG0645|consen    7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSS-GDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV   85 (312)
T ss_pred             EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCC-CCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence            3455677888999999998 99999999999999998753 2234444333 4799999999999999999999999999


Q ss_pred             EEEECCC--cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC---cEEEEeccCCcc-----------
Q psy14961         90 ALWDVES--SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG---YCVQSFEGHHNL-----------  153 (320)
Q Consensus        90 ~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~---~~~~~~~~~~~~-----------  153 (320)
                      .||.-..  .+++..+.+|..+|.+++|++  +|++||+++.|.++.+|.+..+   .+...+++|..-           
T Consensus        86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~--sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d  163 (312)
T KOG0645|consen   86 VIWKKEDGEFECVATLEGHENEVKCVAWSA--SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED  163 (312)
T ss_pred             EEeecCCCceeEEeeeeccccceeEEEEcC--CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence            9997553  367889999999999998854  6999999999999999998743   355556655432           


Q ss_pred             ----ccCCCeEEEEECc---CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        154 ----ITDDKLVNIWDMR---TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       154 ----~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                          .+.|.+|++|+-.   .-.+++++.+|...|.+++|+|.|..|++++.|++++||-+.+.-+.   .+.   ..+.
T Consensus       164 lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~~---~~s---r~~Y  237 (312)
T KOG0645|consen  164 LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLSG---MHS---RALY  237 (312)
T ss_pred             eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcch---hcc---cceE
Confidence                1479999999765   23689999999999999999999999999999999999986532111   011   1234


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCC--eEE-----EEeecCCCceeEEEECcC-CCeEEEecCCCceEeeecc
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKC--CRV-----NHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~--~~~-----~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+.|.  ...|++++.|+.|++|.....  .+.     ..-..|+..|++++|+|. ..+|+|||.||++++|..+
T Consensus       238 ~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  238 DVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             eeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            56666  458999999999999964432  111     123478999999999994 7789999999999999864

>KOG0273|consensus

Probab=100.00  E-value=2.8e-33  Score=235.75  Aligned_cols=265  Identities=23%  Similarity=0.381  Sum_probs=233.2

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      +..|++++|+.+|+.|++|+.||.+++|+.+     .....++..|.++|.+++|...|.+|++++-|+++.+||..++.
T Consensus       235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-----G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~  309 (524)
T KOG0273|consen  235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKD-----GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT  309 (524)
T ss_pred             cCCcceEEecCCCCeEEEeecCcEEEEEecC-----chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce
Confidence            4679999999999999999999999999864     34566788999999999999999999999999999999999999


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEE
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIW  163 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iw  163 (320)
                      ..+.+..|..+...+.|..   ...|++++.|+.|+++.+....++.++.+|++-+               ++|+++++|
T Consensus       310 ~~q~f~~~s~~~lDVdW~~---~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiW  386 (524)
T KOG0273|consen  310 VKQQFEFHSAPALDVDWQS---NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIW  386 (524)
T ss_pred             EEEeeeeccCCccceEEec---CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEee
Confidence            8888888888766666643   3579999999999999998888889998887654               479999999


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCC---------CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSG---------DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g---------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                      .+....+...+.+|...|..+.|+|.|         ..+++++.|+++++||+..+.++..+.++..  .+.+++|+|+|
T Consensus       387 s~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~--pVysvafS~~g  464 (524)
T KOG0273|consen  387 SMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQE--PVYSVAFSPNG  464 (524)
T ss_pred             ecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCC--ceEEEEecCCC
Confidence            999999999999999999999999964         4689999999999999999999888766544  35899999999


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .++|+|+.||.|++|+...+..++... -.+.|..++|+.+|..|..+-.|+.+++-|.+
T Consensus       465 ~ylAsGs~dg~V~iws~~~~~l~~s~~-~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  465 RYLASGSLDGCVHIWSTKTGKLVKSYQ-GTGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             cEEEecCCCCeeEeccccchheeEeec-CCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            999999999999999999887777654 45679999999999999999899999988754

>KOG0319|consensus

Probab=100.00  E-value=9.2e-34  Score=250.12  Aligned_cols=288  Identities=24%  Similarity=0.403  Sum_probs=228.3

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCC--EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGS--VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~--~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      +++||...+...+.+..|+..|.++.|+|+-+  .|++|..|+.+++||+....   .+...+..|.+.|+++.|.+++.
T Consensus       129 v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~---tcl~~~~~H~S~vtsL~~~~d~~  205 (775)
T KOG0319|consen  129 VKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKR---TCLHTMILHKSAVTSLAFSEDSL  205 (775)
T ss_pred             EEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCc---hHHHHHHhhhhheeeeeeccCCc
Confidence            46999999999999999999999999999765  58999999999999985322   24566788999999999988888


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeec-------------------------------------------------------
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSF-------------------------------------------------------  103 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~-------------------------------------------------------  103 (320)
                      .++++++|..+.+||+...+.+..+                                                       
T Consensus       206 ~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~  285 (775)
T KOG0319|consen  206 ELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEID  285 (775)
T ss_pred             eEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhh
Confidence            8888888888888886332110000                                                       


Q ss_pred             ----------------------------------------------------------------------------ccCc
Q psy14961        104 ----------------------------------------------------------------------------HGHT  107 (320)
Q Consensus       104 ----------------------------------------------------------------------------~~~~  107 (320)
                                                                                                  .+|.
T Consensus       286 ~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~  365 (775)
T KOG0319|consen  286 HLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHT  365 (775)
T ss_pred             cceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCch
Confidence                                                                                        0122


Q ss_pred             cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc----EEEEeccCCcc----------------ccCCCeEEEEECcC
Q psy14961        108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY----CVQSFEGHHNL----------------ITDDKLVNIWDMRT  167 (320)
Q Consensus       108 ~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~----~~~~~~~~~~~----------------~~~d~~i~iwd~~~  167 (320)
                      ..|.+++  ...+|.+|++|+.|.++++|.++.+.    ++....+|.+.                ++.|.++++|++..
T Consensus       366 e~vlSL~--~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~  443 (775)
T KOG0319|consen  366 EAVLSLD--VWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPK  443 (775)
T ss_pred             hheeeee--ecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCC
Confidence            2222222  12356688899999999999875443    22233444433                24689999999865


Q ss_pred             Cee---------eeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEE
Q psy14961        168 GYC---------VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF  238 (320)
Q Consensus       168 ~~~---------~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  238 (320)
                      .+.         ..+...|..+|+|++++|+.+.+|+||.|++.+||++...+.+..+..+..  ++.++.|+|..+.++
T Consensus       444 s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~R--Gvw~V~Fs~~dq~la  521 (775)
T KOG0319|consen  444 SKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTR--GVWCVSFSKNDQLLA  521 (775)
T ss_pred             cccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCcc--ceEEEEeccccceeE
Confidence            211         113356999999999999999999999999999999998887777776654  567899999999999


Q ss_pred             EEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       239 ~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      |++.|++|+||.+.+...+.+|.||+..|....|-.+|+.|+||+.||.|++|+.++
T Consensus       522 T~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt  578 (775)
T KOG0319|consen  522 TCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT  578 (775)
T ss_pred             eccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence            999999999999999999999999999999999999999999999999999999543

>KOG0263|consensus

Probab=100.00  E-value=5.6e-34  Score=253.51  Aligned_cols=205  Identities=26%  Similarity=0.447  Sum_probs=182.2

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..|..+|..+.|+|+.++|+++|.|+++++|.++.    ......+.+|..+|+++.|+|.|-++++|+.|++.++|.
T Consensus       446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t----~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs  521 (707)
T KOG0263|consen  446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDT----WSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWS  521 (707)
T ss_pred             EeecCCCceeeeeecccccceeeccCCcceeeeeccc----ceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeee
Confidence            3567899999999999999999999999999999853    334456779999999999999999999999999999999


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      .+...+++.+.+|.+.|.|+.|+|+  .+++++||.|.++|+||..+|.+++                           .
T Consensus       522 ~d~~~PlRifaghlsDV~cv~FHPN--s~Y~aTGSsD~tVRlWDv~~G~~VR---------------------------i  572 (707)
T KOG0263|consen  522 TDHNKPLRIFAGHLSDVDCVSFHPN--SNYVATGSSDRTVRLWDVSTGNSVR---------------------------I  572 (707)
T ss_pred             cccCCchhhhcccccccceEEECCc--ccccccCCCCceEEEEEcCCCcEEE---------------------------E
Confidence            9999999999999999999999775  6799999999999999987776543                           3


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      |.||.++|.+++|+|+|.+|++|++||.|++||+..++.+..+..+..  .+.++.||.+|..||+|+.|.+|++||...
T Consensus       573 F~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~--ti~SlsFS~dg~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  573 FTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTG--TIYSLSFSRDGNVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             ecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccC--ceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence            467999999999999999999999999999999999888776665532  367899999999999999999999999654

>KOG0278|consensus

Probab=100.00  E-value=9.8e-35  Score=226.67  Aligned_cols=266  Identities=24%  Similarity=0.399  Sum_probs=220.3

Q ss_pred             EeCccceEEEEEcC---CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         16 TMPATWVMACAYAP---SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        16 ~~~~~~V~~~~~~~---~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..|..+|..++|+|   +|.+|++++.|+.-.+-+-    +...=+.++.+|.+.|+++....+....++++.|-+.++|
T Consensus        11 ~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g----~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw   86 (334)
T KOG0278|consen   11 HGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNG----DTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVW   86 (334)
T ss_pred             cCCCcceeEEeccCCCCCceEEEEeccCCCchhccC----CCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhh
Confidence            35778999999974   9999999999998877643    2333456789999999999888777788899999999999


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-EEEeccCC-------------ccc--cC
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-VQSFEGHH-------------NLI--TD  156 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-~~~~~~~~-------------~~~--~~  156 (320)
                      |.-++..+..|. |+.-|..++|  +.|.+.|++|+.+..+|+||++.... ...+.+|.             .++  .+
T Consensus        87 ~a~tgdelhsf~-hkhivk~~af--~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSad  163 (334)
T KOG0278|consen   87 DAVTGDELHSFE-HKHIVKAVAF--SQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSAD  163 (334)
T ss_pred             hhhhhhhhhhhh-hhheeeeEEe--cccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeecc
Confidence            999999888876 8888888877  45678999999999999999976431 22222222             122  47


Q ss_pred             CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                      |+.|++||.+++..++++. ...+|+++.++++|+++..+ ..+.|.+||..+-..+..++.   .+.+.+...+|+...
T Consensus       164 d~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~---P~nV~SASL~P~k~~  238 (334)
T KOG0278|consen  164 DKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKM---PCNVESASLHPKKEF  238 (334)
T ss_pred             CCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccC---ccccccccccCCCce
Confidence            8999999999999998876 56689999999999877554 456899999988776655543   345688899999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +++|++|+.+..||..++..+..+ .+|-++|.|+.|+|||...||||.||+||+|++
T Consensus       239 fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt  296 (334)
T KOG0278|consen  239 FVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT  296 (334)
T ss_pred             EEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence            999999999999999998888775 899999999999999999999999999999996

>KOG0288|consensus

Probab=100.00  E-value=4.4e-34  Score=236.99  Aligned_cols=274  Identities=23%  Similarity=0.366  Sum_probs=231.7

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..|...|..+.|-++...|++|+.|..|++|+...+.  .....++.+..+.++.+.|.+++..+++++.|+.+++|+
T Consensus       170 ~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k--~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wn  247 (459)
T KOG0288|consen  170 VLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK--SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWN  247 (459)
T ss_pred             hhhccccccceeEEccCcchhhhcchhhhhhhhhcccch--hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeee
Confidence            355677889999999998899999999999999986433  445667888889999999999999999999999999999


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC---ccc-------c--CCCeEE
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH---NLI-------T--DDKLVN  161 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~---~~~-------~--~d~~i~  161 (320)
                      ++..+...++.+|.+.|.++.+.-.  ...+++|+.|.+|++||+....|..++-.-.   .++       +  .|+.|+
T Consensus       248 vd~~r~~~TLsGHtdkVt~ak~~~~--~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvR  325 (459)
T KOG0288|consen  248 VDSLRLRHTLSGHTDKVTAAKFKLS--HSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVR  325 (459)
T ss_pred             ccchhhhhhhcccccceeeehhhcc--ccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceE
Confidence            9999999999999999998877543  2349999999999999999887766542111   111       1  377899


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce--eeeEEEEEecCCcEEEE
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL--FGATSVDFSVSGRLLFA  239 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~  239 (320)
                      +||.++..+....+.+. .|+++..+++|..+.+++.|.++.+.|+++.+....+......  ...+.+.|||++.|+++
T Consensus       326 fwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaA  404 (459)
T KOG0288|consen  326 FWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAA  404 (459)
T ss_pred             EEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeee
Confidence            99999999999988776 9999999999999999999999999999998777666543322  23567889999999999


Q ss_pred             EeCCCeEEEEcCCCCeEEEEeecC-CC-ceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        240 GYNDYTINVWDSLKCCRVNHLMGH-EN-RVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~~~h-~~-~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      |+.||.|+||+..+++....+... .+ .|++++|+|-|..|++++.++.+++|.
T Consensus       405 GS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  405 GSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             ccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            999999999999998887777543 33 699999999999999999999999984

>KOG0291|consensus

Probab=100.00  E-value=2e-31  Score=235.86  Aligned_cols=289  Identities=24%  Similarity=0.438  Sum_probs=235.7

Q ss_pred             eEeeccccee--EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCc-------------------ccc---
Q psy14961          2 IIWDGLTQTK--EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS-------------------SAK---   57 (320)
Q Consensus         2 ~~W~~~~~~~--~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-------------------~~~---   57 (320)
                      +||++...+.  ...+..|.++|.+|.|..+..-+.+.++||.+.+|..+.....                   ...   
T Consensus       170 rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~  249 (893)
T KOG0291|consen  170 RLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTH  249 (893)
T ss_pred             EEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhc
Confidence            4666665554  4445678999999999999999999999999999987621000                   000   


Q ss_pred             --------cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC
Q psy14961         58 --------KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS  129 (320)
Q Consensus        58 --------~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~  129 (320)
                              +.-+......|+++.|.+....|++|=..|...+|.+....++..+.-...+|..+.+  +..|+.++.|+.
T Consensus       250 ~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~--N~tGDWiA~g~~  327 (893)
T KOG0291|consen  250 KIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSF--NSTGDWIAFGCS  327 (893)
T ss_pred             ceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEe--cccCCEEEEcCC
Confidence                    0001112367889999988888999999999999999988888877655567766666  456899998876


Q ss_pred             C-CeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE
Q psy14961        130 D-KLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV  193 (320)
Q Consensus       130 d-g~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l  193 (320)
                      . |.+-+|+..+..-+...++|...+               .+|+.|++||..++.|+.+|..|+..|+.+.|+..|+.+
T Consensus       328 klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~l  407 (893)
T KOG0291|consen  328 KLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVL  407 (893)
T ss_pred             ccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEE
Confidence            5 799999998876665556554322               368999999999999999999999999999999999999


Q ss_pred             EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-CeEEEEcCCCCeEEEEeecCCCceeEEEE
Q psy14961        194 ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-YTINVWDSLKCCRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       194 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-g~v~~wd~~~~~~~~~~~~h~~~i~~i~~  272 (320)
                      ++.|.||+|+.||+...+....+..+... ...+++..|.|.++..|+.| -.|.+|++++++.+..+.||++||.+++|
T Consensus       408 lssSLDGtVRAwDlkRYrNfRTft~P~p~-QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f  486 (893)
T KOG0291|consen  408 LSSSLDGTVRAWDLKRYRNFRTFTSPEPI-QFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSF  486 (893)
T ss_pred             EEeecCCeEEeeeecccceeeeecCCCce-eeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEE
Confidence            99999999999999988777766655433 34678889999999888865 57999999999999999999999999999


Q ss_pred             CcCCCeEEEecCCCceEeeec
Q psy14961        273 SPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       273 s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +|++..|||||||+|||+|+.
T Consensus       487 ~~~~~~LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  487 SPDGSLLASGSWDKTVRIWDI  507 (893)
T ss_pred             ccccCeEEeccccceEEEEEe
Confidence            999999999999999999996

>KOG0319|consensus

Probab=100.00  E-value=1.3e-32  Score=242.89  Aligned_cols=259  Identities=22%  Similarity=0.292  Sum_probs=216.3

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC-CEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD-QQI   80 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l   80 (320)
                      ++++..+.... -+..|.+.|.++....+|-+|+||++|.++++|.++.............+|...|.++.++..+ .++
T Consensus       349 r~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asff  427 (775)
T KOG0319|consen  349 RLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFF  427 (775)
T ss_pred             EEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEE
Confidence            34444444433 3567888999999777888999999999999999854333444555667899999999986544 689


Q ss_pred             EEEeCCCeEEEEECCCcc-----e----eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         81 LTGSGDCTCALWDVESSQ-----L----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~-----~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      +++|.|+++++|++...+     .    ......|...|.+++++|+  ..++++||.|.+.++|++....         
T Consensus       428 vsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n--dkLiAT~SqDktaKiW~le~~~---------  496 (775)
T KOG0319|consen  428 VSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN--DKLIATGSQDKTAKIWDLEQLR---------  496 (775)
T ss_pred             EEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC--CceEEecccccceeeecccCce---------
Confidence            999999999999986521     1    1134579999999998764  5799999999999999987543         


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEe
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s  231 (320)
                                        ...++.||+..|.|+.|+|..+.++++|.|++|+||.+.+...+..++.+..  .+..+.|-
T Consensus       497 ------------------l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~--aVlra~F~  556 (775)
T KOG0319|consen  497 ------------------LLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTS--AVLRASFI  556 (775)
T ss_pred             ------------------EEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccc--eeEeeeee
Confidence                              3455678999999999999999999999999999999999988888876653  35678899


Q ss_pred             cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        232 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       232 ~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+|+.|++++.||-+++|+..+...+.++.+|.+.|++++.+|++.+++||+.|+.|.+|.
T Consensus       557 ~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk  617 (775)
T KOG0319|consen  557 RNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK  617 (775)
T ss_pred             eCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence            9999999999999999999999999999999999999999999999999999999999997

>KOG0276|consensus

Probab=100.00  E-value=7.1e-33  Score=240.52  Aligned_cols=245  Identities=24%  Similarity=0.392  Sum_probs=214.4

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      +...|-++.|+|....++++-.+|.+.||+.+.+    ...+.+.-..-+|.++.|-...+++++|+.|..|++|+.++.
T Consensus        12 rSdRVKsVd~HPtePw~la~LynG~V~IWnyetq----tmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~   87 (794)
T KOG0276|consen   12 RSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQ----TMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG   87 (794)
T ss_pred             cCCceeeeecCCCCceEEEeeecCeeEEEecccc----eeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccc
Confidence            5678999999999999999999999999987532    234456666788999999988999999999999999999999


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCC
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH  177 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~  177 (320)
                      +.+..|.+|..-+++++++|.  ..+++++|.|-.|++||...+.                          .|.++++||
T Consensus        88 ekV~~FeAH~DyIR~iavHPt--~P~vLtsSDDm~iKlW~we~~w--------------------------a~~qtfeGH  139 (794)
T KOG0276|consen   88 EKVKTFEAHSDYIRSIAVHPT--LPYVLTSSDDMTIKLWDWENEW--------------------------ACEQTFEGH  139 (794)
T ss_pred             eeeEEeeccccceeeeeecCC--CCeEEecCCccEEEEeeccCce--------------------------eeeeEEcCc
Confidence            999999999999999988775  5799999999999999986542                          366788999


Q ss_pred             CCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec--CCcEEEEEeCCCeEEEEcCCCC
Q psy14961        178 QSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       178 ~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..-|.+++|.|. .+.+||+|-|++|++|.+.+..+...++.+.  -++.++.+-+  |..+|++|+.|.++++||.++.
T Consensus       140 ~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHe--kGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk  217 (794)
T KOG0276|consen  140 EHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHE--KGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK  217 (794)
T ss_pred             ceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccc--cCcceEEeccCCCcceEEecCCCceEEEeecchH
Confidence            999999999995 5789999999999999998877666665443  3567788765  4579999999999999999999


Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .++.++.||...|+.+.|+|.-..++|||.|||+|+|++.+.
T Consensus       218 ~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty  259 (794)
T KOG0276|consen  218 SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY  259 (794)
T ss_pred             HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce
Confidence            999999999999999999999999999999999999997443

>KOG0281|consensus

Probab=100.00  E-value=5.7e-34  Score=231.95  Aligned_cols=259  Identities=24%  Similarity=0.417  Sum_probs=210.6

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL   99 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~   99 (320)
                      ..|.++.++.+  .+++|..|++|+|||..    .......+.+|.+.|.|+.|.  ...+++|+.|.+|++||++++++
T Consensus       198 kgVYClQYDD~--kiVSGlrDnTikiWD~n----~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~  269 (499)
T KOG0281|consen  198 KGVYCLQYDDE--KIVSGLRDNTIKIWDKN----SLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEP  269 (499)
T ss_pred             CceEEEEecch--hhhcccccCceEEeccc----cHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCch
Confidence            46888888644  69999999999999863    445566789999999999985  45899999999999999999999


Q ss_pred             eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE---EEeccCCc-------------cccCCCeEEEE
Q psy14961        100 LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV---QSFEGHHN-------------LITDDKLVNIW  163 (320)
Q Consensus       100 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~---~~~~~~~~-------------~~~~d~~i~iw  163 (320)
                      +..+-.|...|..+.|+    ..++++++.|.++.+||+.+...+   +.+.||..             ..+.|.+|++|
T Consensus       270 l~tlihHceaVLhlrf~----ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW  345 (499)
T KOG0281|consen  270 LNTLIHHCEAVLHLRFS----NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW  345 (499)
T ss_pred             hhHHhhhcceeEEEEEe----CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEE
Confidence            99999999999777664    359999999999999999764311   11222221             23568999999


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      ++.+.+++.++.+|+..|.|+.+.  |+.+++|+.|.+|++||+..+..+...+.+...  +..+.|  |.+.+++|..|
T Consensus       346 ~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeL--vRciRF--d~krIVSGaYD  419 (499)
T KOG0281|consen  346 STSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL--VRCIRF--DNKRIVSGAYD  419 (499)
T ss_pred             eccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEeccccHHHHHHhchHHh--hhheee--cCceeeecccc
Confidence            999999999999999999999887  789999999999999999998877666655443  245555  57899999999


Q ss_pred             CeEEEEcCCCCe---------EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhh
Q psy14961        244 YTINVWDSLKCC---------RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       244 g~v~~wd~~~~~---------~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~  298 (320)
                      |+|++||...+.         .+.++..|++.|-.+.|.  ...+++++.|.+|-+||..+-..
T Consensus       420 GkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  420 GKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLNGPP  481 (499)
T ss_pred             ceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCCCCc
Confidence            999999975432         234567899999999994  56899999999999999755433

>KOG0315|consensus

Probab=100.00  E-value=2.4e-31  Score=207.59  Aligned_cols=243  Identities=15%  Similarity=0.254  Sum_probs=194.5

Q ss_pred             CeEeeccccee--EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTK--EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~--~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+++|+..+..  ...++.|++.|+++.|.-+|+.+.+||.||+++|||+..     ...+....|.++|.++...|+..
T Consensus        63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~-----~~~qR~~~~~spVn~vvlhpnQt  137 (311)
T KOG0315|consen   63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS-----LSCQRNYQHNSPVNTVVLHPNQT  137 (311)
T ss_pred             eEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccC-----cccchhccCCCCcceEEecCCcc
Confidence            46888876554  456788999999999999999999999999999999853     22234556779999999999989


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeec-ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      .|++|..+|.|++||+....+...+ +.....+.++.+  .++|..++.+...|.+.+|++-+.+-..            
T Consensus       138 eLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v--~~dgsml~a~nnkG~cyvW~l~~~~~~s------------  203 (311)
T KOG0315|consen  138 ELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTV--MPDGSMLAAANNKGNCYVWRLLNHQTAS------------  203 (311)
T ss_pred             eEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEE--cCCCcEEEEecCCccEEEEEccCCCccc------------
Confidence            9999999999999999877554433 233445666655  5679999999999999999987643211            


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-eeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-KEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                               .-.++..++.|..-+....+||++++||++|.|.+++||+...- +.....+.+  ...+..++||.||.|
T Consensus       204 ---------~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh--~rWvWdc~FS~dg~Y  272 (311)
T KOG0315|consen  204 ---------ELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGH--QRWVWDCAFSADGEY  272 (311)
T ss_pred             ---------cceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecC--CceEEeeeeccCccE
Confidence                     12456667889999999999999999999999999999998765 211222222  123568999999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEEC
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVS  273 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s  273 (320)
                      |+||++|+.+++||+..++.+.+..+|-.+..|++.+
T Consensus       273 lvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  273 LVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             EEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence            9999999999999999999999999998888787754

>KOG0292|consensus

Probab=100.00  E-value=3e-32  Score=244.73  Aligned_cols=283  Identities=22%  Similarity=0.329  Sum_probs=221.8

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |.+||-.-++.++.+..|..+|.++.|+|++.++++||.|..|+||+..    ...+.-++.+|...|..+.|.+.-.+|
T Consensus        33 IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk----~rrclftL~GHlDYVRt~~FHheyPWI  108 (1202)
T KOG0292|consen   33 IQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK----TRRCLFTLLGHLDYVRTVFFHHEYPWI  108 (1202)
T ss_pred             eeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc----cceehhhhccccceeEEeeccCCCceE
Confidence            4689999999999999999999999999999999999999999999874    223455788999999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE----EeccCCccccC
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ----SFEGHHNLITD  156 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~----~~~~~~~~~~~  156 (320)
                      +++|.|.+|+||+.++++++..+.+|..-|+|..|+|.  .+.++|+|-|-+||+||+..-+--.    .++.+....  
T Consensus       109 lSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhpt--EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~--  184 (1202)
T KOG0292|consen  109 LSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPT--EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQ--  184 (1202)
T ss_pred             EEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCc--cceEEEecccceEEEEeecchhccCCCCCCchhhhhcc--
Confidence            99999999999999999999999999999999999876  4599999999999999985322111    111000000  


Q ss_pred             CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                      .+...++--...-..+.++||...|+-++|||.-..++||+.|..|++|..+..+--..-........++++-|+|...+
T Consensus       185 ~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~l  264 (1202)
T KOG0292|consen  185 QGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDL  264 (1202)
T ss_pred             ccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccce
Confidence            00001110001112345789999999999999999999999999999999875432111111111224678999999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +++.++|++|++||+.+.+.+.++..-.+.-+.|+.+|..+++|.|.. +-+-++.
T Consensus       265 IlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgHD-sGm~VFk  319 (1202)
T KOG0292|consen  265 ILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGHD-SGMIVFK  319 (1202)
T ss_pred             eEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeecC-CceEEEE
Confidence            999999999999999999999999877889999999999998886654 4444443

>KOG0285|consensus

Probab=100.00  E-value=2.1e-32  Score=223.49  Aligned_cols=232  Identities=25%  Similarity=0.442  Sum_probs=205.5

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      ..+.+|.+.|.|+.+.|..+++++|+.|++++|||+.++++...+.+|.+.|..+++++.  ..++++++.|+.|+.||+
T Consensus       145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~r--HpYlFs~gedk~VKCwDL  222 (460)
T KOG0285|consen  145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKR--HPYLFSAGEDKQVKCWDL  222 (460)
T ss_pred             hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeeccc--CceEEEecCCCeeEEEec
Confidence            456789999999999999999999999999999999999999999999999999988653  569999999999999999


Q ss_pred             CCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEE
Q psy14961        139 RTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCR  203 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~  203 (320)
                      ...+.++.+.+|...+               +.|..+++||+|+...+..+.||..+|.++.+.|....+++||.|++|+
T Consensus       223 e~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvr  302 (460)
T KOG0285|consen  223 EYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVR  302 (460)
T ss_pred             hhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEE
Confidence            9988877776664332               3588999999999999999999999999999999888999999999999


Q ss_pred             EEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961        204 LFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       204 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      +||++.++.......+..  .+.+++.+|....+|+++.| .|+-|++-.+..+..+.+|.+-|++++.+.|+ ++++|+
T Consensus       303 lWDl~agkt~~tlt~hkk--svral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~  378 (460)
T KOG0285|consen  303 LWDLRAGKTMITLTHHKK--SVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGG  378 (460)
T ss_pred             EeeeccCceeEeeecccc--eeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEEcC
Confidence            999999988776666554  35788899999999999877 59999999888888899999999999999987 678899


Q ss_pred             CCCceEeeecchH
Q psy14961        284 WDTTLRDEESKNR  296 (320)
Q Consensus       284 ~D~~ir~~~~~~~  296 (320)
                      .+|.|.+||.+..
T Consensus       379 dng~~~fwdwksg  391 (460)
T KOG0285|consen  379 DNGSIMFWDWKSG  391 (460)
T ss_pred             CceEEEEEecCcC
Confidence            9999999995443

>KOG0276|consensus

Probab=100.00  E-value=6.3e-32  Score=234.66  Aligned_cols=256  Identities=25%  Similarity=0.380  Sum_probs=223.6

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      +.|||-+|++...++...+.+|.++.|-...+.+++|+.|..|+||+.+    ...+...+..|...|.|+..+|...++
T Consensus        37 V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn----t~ekV~~FeAH~DyIR~iavHPt~P~v  112 (794)
T KOG0276|consen   37 VQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN----TGEKVKTFEAHSDYIRSIAVHPTLPYV  112 (794)
T ss_pred             eEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc----cceeeEEeeccccceeeeeecCCCCeE
Confidence            3599999999999999999999999999999999999999999999875    345667899999999999999999999


Q ss_pred             EEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCe
Q psy14961         81 LTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKL  159 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~  159 (320)
                      ++++.|-+|++||.+.. .+.+.|.+|..-|++++|.|. |.+.++|++-|++|++|.+.+..                 
T Consensus       113 LtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPk-D~ntFaS~sLDrTVKVWslgs~~-----------------  174 (794)
T KOG0276|consen  113 LTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPK-DPNTFASASLDRTVKVWSLGSPH-----------------  174 (794)
T ss_pred             EecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCC-CccceeeeeccccEEEEEcCCCC-----------------
Confidence            99999999999999865 677899999999999999886 56899999999999999886543                 


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCC--CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG--DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                                +..++++|...|+|++|-+-|  .+|++|+.|.++++||..+...+...+.+..  .++.+.|+|.=.++
T Consensus       175 ----------~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~--Nvs~v~fhp~lpii  242 (794)
T KOG0276|consen  175 ----------PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTN--NVSFVFFHPELPII  242 (794)
T ss_pred             ----------CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccc--cceEEEecCCCcEE
Confidence                      445677899999999998855  5899999999999999998877766665543  35778899999999


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      ++|++||+++||...+.+...++.-.-..|+||+-.+.+..++.|...|.|-+
T Consensus       243 isgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  243 ISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV  295 (794)
T ss_pred             EEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence            99999999999998887777777766779999999998888999988888763

>KOG0647|consensus

Probab=100.00  E-value=4e-31  Score=211.54  Aligned_cols=263  Identities=17%  Similarity=0.325  Sum_probs=210.3

Q ss_pred             CccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         18 PATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        18 ~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      +++.|.+++||| ...+++++|.|++|++|++...+...  .+....|.++|.++.|+.+|..+++|+.|+.+++||+.+
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~--~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S  103 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLV--PKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS  103 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCccc--chhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence            567899999999 55677799999999999996432211  234567899999999999999999999999999999999


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC------------ccccCCCeEEEEE
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH------------NLITDDKLVNIWD  164 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~------------~~~~~d~~i~iwd  164 (320)
                      ++. ..+..|.++|..+.+.+...-..|++||+|.+|+.||.+....+.+++-..            .+.+.++.|.+|+
T Consensus       104 ~Q~-~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vyn  182 (347)
T KOG0647|consen  104 GQV-SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYN  182 (347)
T ss_pred             CCe-eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEE
Confidence            975 456779999999998876656789999999999999999877665543211            1235788999999


Q ss_pred             CcCCeeeeee--cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee--E---eEEec----CcceeeeEEEEEecC
Q psy14961        165 MRTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE--V---ACYKK----DSILFGATSVDFSVS  233 (320)
Q Consensus       165 ~~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--~---~~~~~----~~~~~~~~~~~~s~~  233 (320)
                      ++++......  ....-.++|++..++.+..+.|+-+|.+.+..++.+.+  -   .++..    ...++.+.+++|+|.
T Consensus       183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~  262 (347)
T KOG0647|consen  183 LENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPV  262 (347)
T ss_pred             cCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecc
Confidence            9775433211  11234688999999998889999999999998877522  2   22321    112677889999999


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      -..|+|.+.||++.+||.....++.+...|..+|++.+|+.+|.++|=|.
T Consensus       263 hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  263 HGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             cceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEe
Confidence            99999999999999999888888888899999999999999999987653

>KOG0318|consensus

Probab=100.00  E-value=3.8e-30  Score=219.60  Aligned_cols=286  Identities=23%  Similarity=0.316  Sum_probs=231.9

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT   82 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s   82 (320)
                      +-++.++.....++.|..+|+...|+|.|.|+|+|...|.++|||....  ...++.++..-.++|..+.|..++++|++
T Consensus        43 ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~--~hiLKnef~v~aG~I~Di~Wd~ds~RI~a  120 (603)
T KOG0318|consen   43 IRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQK--EHILKNEFQVLAGPIKDISWDFDSKRIAA  120 (603)
T ss_pred             EEECCCccceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCc--ceeeeeeeeecccccccceeCCCCcEEEE
Confidence            4455556665667788889999999999999999999999999987432  23445667777899999999999999988


Q ss_pred             EeCC----CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----
Q psy14961         83 GSGD----CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI----  154 (320)
Q Consensus        83 ~~~d----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~----  154 (320)
                      .++.    |.+.+||  ++.-+-.+.+|...+.+++|-|+. .-.+++|+.|+.+.+|+=.-.+-..++..|.+++    
T Consensus       121 vGEGrerfg~~F~~D--SG~SvGei~GhSr~ins~~~KpsR-PfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VR  197 (603)
T KOG0318|consen  121 VGEGRERFGHVFLWD--SGNSVGEITGHSRRINSVDFKPSR-PFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVR  197 (603)
T ss_pred             EecCccceeEEEEec--CCCccceeeccceeEeeeeccCCC-ceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEE
Confidence            7653    4555665  566677888999999999998763 3589999999999999854444344444444433    


Q ss_pred             -----------cCCCeEEEEECcCCeeeeeec---CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc
Q psy14961        155 -----------TDDKLVNIWDMRTGYCVQSFE---GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS  220 (320)
Q Consensus       155 -----------~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~  220 (320)
                                 +.|+.+.+||-.+++.+..+.   +|++.|.+++|+||+..+++++.|.+++|||+.+.+.+..+....
T Consensus       198 ysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~  277 (603)
T KOG0318|consen  198 YSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGS  277 (603)
T ss_pred             ECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCC
Confidence                       468999999999999998887   899999999999999999999999999999999988777665443


Q ss_pred             ceee-eEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        221 ILFG-ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       221 ~~~~-~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ..-. ...+.|-  ...|++-+-+|.|.+++.....++..+.+|...|++++.+||+++|.|||+||.|--|++..
T Consensus       278 ~v~dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~  351 (603)
T KOG0318|consen  278 TVEDQQVGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGS  351 (603)
T ss_pred             chhceEEEEEEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCC
Confidence            3111 1223343  56788999999999999988888899999999999999999999999999999999999643

>KOG0313|consensus

Probab=100.00  E-value=1.1e-31  Score=220.79  Aligned_cols=267  Identities=24%  Similarity=0.357  Sum_probs=202.9

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC---CCEEEEEeCCCeEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS---DQQILTGSGDCTCALW   92 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~v~iw   92 (320)
                      ..|.+||.++...  +..|++|+.||.+++|+..     +.....+.+|.+++.++.+-..   ...+++++.|.++++|
T Consensus       102 ~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-----Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw  174 (423)
T KOG0313|consen  102 FLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-----GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLW  174 (423)
T ss_pred             ccchhhhhhhccc--CceEEEeecCCeeEEEecC-----CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEE
Confidence            3577899998887  6799999999999999873     3445577899999997766322   2359999999999999


Q ss_pred             ECCCcce----eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCC
Q psy14961         93 DVESSQL----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG  168 (320)
Q Consensus        93 d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~  168 (320)
                      ..+.+..    +....+|+..|-++..  .++|..+++|+.|..|++|+..+.. ...++...+.-. ...-+-=...++
T Consensus       175 ~~~~~~~~~~~~~~~~GHk~~V~sVsv--~~sgtr~~SgS~D~~lkiWs~~~~~-~~~~E~~s~~rr-k~~~~~~~~~~r  250 (423)
T KOG0313|consen  175 KWNVGENKVKALKVCRGHKRSVDSVSV--DSSGTRFCSGSWDTMLKIWSVETDE-EDELESSSNRRR-KKQKREKEGGTR  250 (423)
T ss_pred             EecCchhhhhHHhHhcccccceeEEEe--cCCCCeEEeecccceeeecccCCCc-cccccccchhhh-hhhhhhhccccc
Confidence            8877643    3334589999988865  5568999999999999999943211 111111000000 000000012345


Q ss_pred             eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961        169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINV  248 (320)
Q Consensus       169 ~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~  248 (320)
                      .++.++.||..+|.++.|++ ...+++++.|.+|+.||+.+++..........   ..+++.+|...+|++|+.|..+++
T Consensus       251 ~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ks---l~~i~~~~~~~Ll~~gssdr~irl  326 (423)
T KOG0313|consen  251 TPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKS---LNCISYSPLSKLLASGSSDRHIRL  326 (423)
T ss_pred             CceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcc---eeEeecccccceeeecCCCCceee
Confidence            67888999999999999998 56789999999999999999887665554433   467889999999999999999999


Q ss_pred             EcCCCC---eEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecchHh
Q psy14961        249 WDSLKC---CRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNRY  297 (320)
Q Consensus       249 wd~~~~---~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~~  297 (320)
                      ||.+.+   -...++.+|.+.|.++.|+| +..+|+|||+|+++++||.+..-
T Consensus       327 ~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k  379 (423)
T KOG0313|consen  327 WDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK  379 (423)
T ss_pred             cCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence            997654   34577899999999999999 66789999999999999975543

>KOG0643|consensus

Probab=100.00  E-value=1.5e-31  Score=210.61  Aligned_cols=272  Identities=23%  Similarity=0.354  Sum_probs=214.3

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +..|+.+++-+.|..+|.+|++++.|..+.||-..    ......++.+|.+.|+|+...-+...+++|+.|.++++||+
T Consensus         6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~----nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv   81 (327)
T KOG0643|consen    6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSL----NGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV   81 (327)
T ss_pred             cccCccccceEEecCCCcEEEEecCCCCceEEEec----CCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence            34688999999999999999999999999999542    33456789999999999999888899999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-----CCeEEEEeCCC-------CcEEEEeccCCccc--------
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-----DKLVNIWDMRT-------GYCVQSFEGHHNLI--------  154 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-----dg~i~lwd~~~-------~~~~~~~~~~~~~~--------  154 (320)
                      ++++.+..++ -..+|..+.|.+  +|++++....     .+.|.++|++.       ..++..+..+...+        
T Consensus        82 ~tGk~la~~k-~~~~Vk~~~F~~--~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l  158 (327)
T KOG0643|consen   82 ETGKQLATWK-TNSPVKRVDFSF--GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL  158 (327)
T ss_pred             CCCcEEEEee-cCCeeEEEeecc--CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence            9999998887 467788888855  5776665543     35699999873       23333332221111        


Q ss_pred             -------cCCCeEEEEECcCCe-eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        155 -------TDDKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       155 -------~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                             -+++.|..||+++++ .+...+-|...|+.++++|+..+++++|.|.+-++||..+-+.+..+....   ++.
T Consensus       159 ~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~---PvN  235 (327)
T KOG0643|consen  159 GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTER---PVN  235 (327)
T ss_pred             CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecc---ccc
Confidence                   258999999999974 556667799999999999999999999999999999999888777776554   357


Q ss_pred             EEEEecCCcEEEEEeCCC--------------eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        227 SVDFSVSGRLLFAGYNDY--------------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg--------------~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +++++|....++.|+...              ..++|++...+.+....+|-++|++++|+|+|+..+||+.||.+|+..
T Consensus       236 ~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~  315 (327)
T KOG0643|consen  236 TAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHH  315 (327)
T ss_pred             ceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEE
Confidence            788999777766665321              122333333344566789999999999999999999999999999997


Q ss_pred             cchH
Q psy14961        293 SKNR  296 (320)
Q Consensus       293 ~~~~  296 (320)
                      ....
T Consensus       316 Fd~~  319 (327)
T KOG0643|consen  316 FDSN  319 (327)
T ss_pred             eccc
Confidence            6544

>KOG0284|consensus

Probab=100.00  E-value=5.1e-33  Score=230.41  Aligned_cols=241  Identities=24%  Similarity=0.447  Sum_probs=200.3

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~   81 (320)
                      +|++..-.+..=.-.|...|.++.|+++|.++++|..+|.|++|+.+..     ..+.+. .|...|++++|++.+..++
T Consensus       122 LWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-----nVk~~~ahh~eaIRdlafSpnDskF~  196 (464)
T KOG0284|consen  122 LWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-----NVKIIQAHHAEAIRDLAFSPNDSKFL  196 (464)
T ss_pred             EecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-----hhHHhhHhhhhhhheeccCCCCceeE
Confidence            6776433322212257789999999999999999999999999986421     122333 4558999999999999999


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-------
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------  154 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------  154 (320)
                      +++.||+|+|||....+....+.+|.-.|.+++|+|.  ..++++|+.|..|++||.+++.|+.++.+|.+.+       
T Consensus       197 t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~--kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~  274 (464)
T KOG0284|consen  197 TCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT--KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNP  274 (464)
T ss_pred             EecCCCeEEEEeccCCchhheeccCCCCcceeccCCc--cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcC
Confidence            9999999999999888777888999999999999886  4589999999999999999999998887776544       


Q ss_pred             --------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        155 --------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       155 --------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                              +.|..++++|+++.+.++.+++|...|.++.|+|- ...|.+|+.||.|..|.+...+++...+.. ....+
T Consensus       275 n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~A-Hd~~i  353 (464)
T KOG0284|consen  275 NGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPA-HDGEI  353 (464)
T ss_pred             CCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcc-cccce
Confidence                    46889999999999999999999999999999995 457889999999999999855555443322 22357


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      .+++++|-|.+|++|++|.++++|..
T Consensus       354 wsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  354 WSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             eeeeccccceeEeecCCCcceeeecc
Confidence            89999999999999999999999963

>KOG1446|consensus

Probab=100.00  E-value=6.6e-30  Score=206.05  Aligned_cols=266  Identities=21%  Similarity=0.353  Sum_probs=212.3

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC--CCeEEEEECCC
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG--DCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~   96 (320)
                      ...|.++.|+++|.++++++.|..+++||..    .....+++..++-.+..+.|......++.++.  |.+||.-++.+
T Consensus        14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~----~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d   89 (311)
T KOG1446|consen   14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSL----SGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD   89 (311)
T ss_pred             CCceeEEEecCCCCEEEEecCCCeEEEEEcC----CCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec
Confidence            5678999999999999999999999999974    22334455556566777888776777776666  89999999999


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe----------ccCCcc---ccCCCeEEEE
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF----------EGHHNL---ITDDKLVNIW  163 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~----------~~~~~~---~~~d~~i~iw  163 (320)
                      ++.++-|.+|...|..++++|.  ++.++|++.|++|++||++..+|...+          ++...+   ......|++|
T Consensus        90 NkylRYF~GH~~~V~sL~~sP~--~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLy  167 (311)
T KOG1446|consen   90 NKYLRYFPGHKKRVNSLSVSPK--DDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLY  167 (311)
T ss_pred             CceEEEcCCCCceEEEEEecCC--CCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEE
Confidence            9999999999999999988765  579999999999999999976654333          222211   1234489999


Q ss_pred             ECcCC--eeeeeec---CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee-eeEEEEEecCCcEE
Q psy14961        164 DMRTG--YCVQSFE---GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF-GATSVDFSVSGRLL  237 (320)
Q Consensus       164 d~~~~--~~~~~~~---~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l  237 (320)
                      |+|..  .+..++.   +...+.+.|.|+|+|++++.+...+.+.+.|.-.|.....+....... -..++.|+||++++
T Consensus       168 D~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fv  247 (311)
T KOG1446|consen  168 DLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFV  247 (311)
T ss_pred             EecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEE
Confidence            99873  3444443   345678999999999999999999999999998888766665443221 12578899999999


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ++|+.||+|.+|+..++.++..+.+ +..++.++.|+|.-.++||++.  .+-+|-
T Consensus       248 l~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s--~l~fw~  301 (311)
T KOG1446|consen  248 LSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS--NLVFWL  301 (311)
T ss_pred             EEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCc--eEEEEe
Confidence            9999999999999999999988888 7899999999998888888764  455554

>KOG0306|consensus

Probab=100.00  E-value=2.8e-30  Score=228.60  Aligned_cols=285  Identities=22%  Similarity=0.357  Sum_probs=226.5

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+||+.+....+..+..|...|+.+.|+..|..|++||.|+.|-+||+-.+.    -.-.+.+|...|+...|..+..++
T Consensus        89 Vqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~----Gl~rL~GHkd~iT~~~F~~~~~~l  164 (888)
T KOG0306|consen   89 VQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEE----GLFRLRGHKDSITQALFLNGDSFL  164 (888)
T ss_pred             EEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccce----eeEEeecchHHHhHHhccCCCeEE
Confidence            4699999887777778899999999999999999999999999999986332    123578999999999998878899


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC----------------C---
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT----------------G---  141 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~----------------~---  141 (320)
                      ++.+.|+.|++||++++.+..+.-.|.+.++.+++.+    +.+++++.|+.+++|++..                |   
T Consensus       165 vS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~----~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~  240 (888)
T KOG0306|consen  165 VSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE----KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFI  240 (888)
T ss_pred             EEeccCceEEEEecccceeeeEEecccceEEEEEEec----ceEEEEecCCceEEEEeecccccccccccceeeccceee
Confidence            9999999999999999999988888999999988753    6899999999999999811                0   


Q ss_pred             -----cEEE----------Eecc---------------------------------------------------------
Q psy14961        142 -----YCVQ----------SFEG---------------------------------------------------------  149 (320)
Q Consensus       142 -----~~~~----------~~~~---------------------------------------------------------  149 (320)
                           +.+.          ..++                                                         
T Consensus       241 rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~  320 (888)
T KOG0306|consen  241 RQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTS  320 (888)
T ss_pred             eccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheech
Confidence                 0000          0000                                                         


Q ss_pred             ------------CCc--cc---------------------------------------------------cCCCeEEEEE
Q psy14961        150 ------------HHN--LI---------------------------------------------------TDDKLVNIWD  164 (320)
Q Consensus       150 ------------~~~--~~---------------------------------------------------~~d~~i~iwd  164 (320)
                                  +..  .+                                                   ...+.+++|+
T Consensus       321 ~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn  400 (888)
T KOG0306|consen  321 AKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWN  400 (888)
T ss_pred             hheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEE
Confidence                        000  00                                                   0135688888


Q ss_pred             CcCCeeee----------------------------------------eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEE
Q psy14961        165 MRTGYCVQ----------------------------------------SFEGHQSDVNSVKFHPSGDAVATGSDDATCRL  204 (320)
Q Consensus       165 ~~~~~~~~----------------------------------------~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~i  204 (320)
                      ..+.+|+.                                        ++++|.+.|.+++.+||+..+++||.|++|++
T Consensus       401 ~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkf  480 (888)
T KOG0306|consen  401 RDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKF  480 (888)
T ss_pred             ccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEE
Confidence            77766653                                        33478999999999999999999999999999


Q ss_pred             EECCC-----Ce--eEeEEecCcc---eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        205 FDLRA-----DK--EVACYKKDSI---LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       205 wd~~~-----~~--~~~~~~~~~~---~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      ||..-     +.  .+....+...   .-.+.++++||||++||+|=-|.+|++|-+.+....-++.||.-||.||..||
T Consensus       481 Wdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~  560 (888)
T KOG0306|consen  481 WDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISP  560 (888)
T ss_pred             EeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccC
Confidence            99631     11  1111111111   11367899999999999999999999998888777778999999999999999


Q ss_pred             CCCeEEEecCCCceEeeec
Q psy14961        275 DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       275 ~~~~l~s~s~D~~ir~~~~  293 (320)
                      |+++++|||.|+.+++|=.
T Consensus       561 DSklivTgSADKnVKiWGL  579 (888)
T KOG0306|consen  561 DSKLIVTGSADKNVKIWGL  579 (888)
T ss_pred             CcCeEEeccCCCceEEecc
Confidence            9999999999999999964

>KOG0292|consensus

Probab=99.98  E-value=4.6e-31  Score=237.19  Aligned_cols=253  Identities=19%  Similarity=0.313  Sum_probs=210.6

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      +.....|-.++|+|....|+++-..|.|.+||..    .......+.+|.++|..+.|.+....+++|+.|..|++|+..
T Consensus         6 EskSsRvKglsFHP~rPwILtslHsG~IQlWDYR----M~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk   81 (1202)
T KOG0292|consen    6 ESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYR----MGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK   81 (1202)
T ss_pred             hcccccccceecCCCCCEEEEeecCceeeeehhh----hhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence            3445678899999999999999999999999863    234566788999999999999999999999999999999999


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      +.+++.++.+|..-|..+.|+.  .-..++|+|.|-+|++||..++.|+.                           .+.
T Consensus        82 ~rrclftL~GHlDYVRt~~FHh--eyPWIlSASDDQTIrIWNwqsr~~ia---------------------------vlt  132 (1202)
T KOG0292|consen   82 TRRCLFTLLGHLDYVRTVFFHH--EYPWILSASDDQTIRIWNWQSRKCIA---------------------------VLT  132 (1202)
T ss_pred             cceehhhhccccceeEEeeccC--CCceEEEccCCCeEEEEeccCCceEE---------------------------EEe
Confidence            9999999999999999998865  35699999999999999987766554                           455


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe------------------EEe---------cCcceeeeEEE
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA------------------CYK---------KDSILFGATSV  228 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~------------------~~~---------~~~~~~~~~~~  228 (320)
                      ||..-|.|.+|||..+.++|+|-|-+|++||+..-+...                  .+.         .+..-.++.-+
T Consensus       133 GHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwa  212 (1202)
T KOG0292|consen  133 GHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWA  212 (1202)
T ss_pred             cCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceE
Confidence            677789999999999999999999999999985321100                  000         01111256789


Q ss_pred             EEecCCcEEEEEeCCCeEEEEcCCCC--eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhh-hhe
Q psy14961        229 DFSVSGRLLFAGYNDYTINVWDSLKC--CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYV-QYL  301 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg~v~~wd~~~~--~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~-~~~  301 (320)
                      +|+|.-.++++|+.|..|++|.+...  -.+.++.+|.+.|+++-|+|...+++|.|.|++||+||+..+-. ++|
T Consensus       213 AfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tf  288 (1202)
T KOG0292|consen  213 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTF  288 (1202)
T ss_pred             EecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeee
Confidence            99999999999999999999986543  34677899999999999999999999999999999999765533 344

>KOG0277|consensus

Probab=99.98  E-value=4.4e-31  Score=206.71  Aligned_cols=242  Identities=23%  Similarity=0.348  Sum_probs=197.9

Q ss_pred             ccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCC
Q psy14961         19 ATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      ++.+..++|++. .+.+++++.||++++||+.   .+...+..+++|+..|.++.|.+ ..+.+++++.|++|++|+.+.
T Consensus        60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~---~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r  136 (311)
T KOG0277|consen   60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLT---MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR  136 (311)
T ss_pred             ccceeEeeecCCCcceEEEEecCceEEEeccC---CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCC
Confidence            456888999974 4588889999999999964   23345667889999999999965 456788889999999999999


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      ++.++++.+|...|+...++|. .++.++++|.|+.+++||++..                          ++... ++.
T Consensus       137 ~~Sv~Tf~gh~~~Iy~a~~sp~-~~nlfas~Sgd~~l~lwdvr~~--------------------------gk~~~-i~a  188 (311)
T KOG0277|consen  137 PNSVQTFNGHNSCIYQAAFSPH-IPNLFASASGDGTLRLWDVRSP--------------------------GKFMS-IEA  188 (311)
T ss_pred             CcceEeecCCccEEEEEecCCC-CCCeEEEccCCceEEEEEecCC--------------------------CceeE-EEe
Confidence            9999999999999999999987 4689999999999999998642                          11222 567


Q ss_pred             CCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCC
Q psy14961        177 HQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADK-EVACYKKDSILFGATSVDFSVSG-RLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       177 ~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~  253 (320)
                      |..+|.|..|+.. .+.|++|+.|+.|+.||++.-+ ++...  ....+.+..++|||.. ..||+++.|-+++|||...
T Consensus       189 h~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL--~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~  266 (311)
T KOG0277|consen  189 HNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL--NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPER  266 (311)
T ss_pred             ccceeEeecccccCCcEEEecCCCceEEEEehhhccccceee--cCCceEEEEEecCcchhhHhhhccccceEEeccccc
Confidence            8889999999974 5678999999999999998644 23332  3334568899999975 4789999999999999764


Q ss_pred             C-eEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeec
Q psy14961        254 C-CRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       254 ~-~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~  293 (320)
                      . ..+.+...|+.-|..+.||+ ++.++|++++|.++.+|+-
T Consensus       267 ~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  267 QDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             chhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            3 34455678999999999998 7889999999999999983

>KOG0313|consensus

Probab=99.98  E-value=4e-30  Score=211.54  Aligned_cols=260  Identities=21%  Similarity=0.340  Sum_probs=210.3

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCC---EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGS---VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~---~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      ++|||.. ++.......|...+.++++.....   .+++||.|.++++|..+.++..........+|...|.++...+++
T Consensus       127 ~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg  205 (423)
T KOG0313|consen  127 SRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG  205 (423)
T ss_pred             eEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCC
Confidence            3689987 555566778999999888764443   599999999999999876655555555566999999999999999


Q ss_pred             CEEEEEeCCCeEEEEECCC-------------------------cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCe
Q psy14961         78 QQILTGSGDCTCALWDVES-------------------------SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKL  132 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~-------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~  132 (320)
                      ..+++|+.|.+++||+.++                         +.++..+.+|.++|.++.|.+   ...++++++|.+
T Consensus       206 tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d---~~v~yS~SwDHT  282 (423)
T KOG0313|consen  206 TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD---ATVIYSVSWDHT  282 (423)
T ss_pred             CeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC---CCceEeecccce
Confidence            9999999999999999321                         124556789999999998865   358999999999


Q ss_pred             EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee
Q psy14961        133 VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE  212 (320)
Q Consensus       133 i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~  212 (320)
                      |+.||+.++.++..+.                            -...++|++++|..+.|++|+.|..+++||.+++..
T Consensus       283 Ik~WDletg~~~~~~~----------------------------~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~g  334 (423)
T KOG0313|consen  283 IKVWDLETGGLKSTLT----------------------------TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDG  334 (423)
T ss_pred             EEEEEeecccceeeee----------------------------cCcceeEeecccccceeeecCCCCceeecCCCCCCC
Confidence            9999999887655432                            123578999999999999999999999999987642


Q ss_pred             ---EeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCCe-EEEEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961        213 ---VACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKCC-RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       213 ---~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~~-~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                         ...+..+..  -+.++.|+|... +|++|+.|+++++||.++.. ++..+.+|.+.|.++.|+. +..++|||.|.+
T Consensus       335 s~v~~s~~gH~n--wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~  411 (423)
T KOG0313|consen  335 SVVSQSLIGHKN--WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNK  411 (423)
T ss_pred             ceeEEeeecchh--hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcce
Confidence               223333333  467899999765 67888999999999998876 8899999999999999976 568999999999


Q ss_pred             eEeeecch
Q psy14961        288 LRDEESKN  295 (320)
Q Consensus       288 ir~~~~~~  295 (320)
                      ||++....
T Consensus       412 l~i~~~~~  419 (423)
T KOG0313|consen  412 LRIFKGSP  419 (423)
T ss_pred             EEEecccc
Confidence            99988644

>PTZ00421 coronin; Provisional

Probab=99.98  E-value=2.4e-29  Score=226.85  Aligned_cols=265  Identities=18%  Similarity=0.218  Sum_probs=194.8

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccC------Ccc---cccccccccccCeEEEEecC-CCCEEEEEeCCCeEE
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALED------DSS---AKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCA   90 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~------~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~   90 (320)
                      .|....+++++..+++++.+.....|+.....      ...   .....+.+|.+.|.++.|++ +++.|++|+.|++|+
T Consensus        22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk  101 (493)
T PTZ00421         22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM  101 (493)
T ss_pred             ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence            35556677887778888877777777642110      000   11123678999999999988 778999999999999


Q ss_pred             EEECCCc-------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEE
Q psy14961         91 LWDVESS-------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIW  163 (320)
Q Consensus        91 iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iw  163 (320)
                      +||+.++       .++..+.+|...|.+++|+|.. ++.|++++.|+.|++||++++..+                   
T Consensus       102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~-~~iLaSgs~DgtVrIWDl~tg~~~-------------------  161 (493)
T PTZ00421        102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA-MNVLASAGADMVVNVWDVERGKAV-------------------  161 (493)
T ss_pred             EEecCCCccccccCcceEEecCCCCcEEEEEeCcCC-CCEEEEEeCCCEEEEEECCCCeEE-------------------
Confidence            9998764       3466788999999999997753 368999999999999998776433                   


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe--
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY--  241 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--  241 (320)
                              ..+.+|...|.+++|+|+|..|++++.|++|++||+++++.+.....+... ....+.|.+++..+++++  
T Consensus       162 --------~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~-~~~~~~w~~~~~~ivt~G~s  232 (493)
T PTZ00421        162 --------EVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA-KSQRCLWAKRKDLIITLGCS  232 (493)
T ss_pred             --------EEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC-cceEEEEcCCCCeEEEEecC
Confidence                    334568888999999999999999999999999999988876555443221 123567888877776643  


Q ss_pred             --CCCeEEEEcCCCCe-EEEEeec-CCCceeEEEECcCCCeEEEecC-CCceEeeecchHhhhheeeeeeecCCcceE
Q psy14961        242 --NDYTINVWDSLKCC-RVNHLMG-HENRVSCLQVSPDGTAFSSGSW-DTTLRDEESKNRYVQYLLRSRITKPTQGLT  314 (320)
Q Consensus       242 --~dg~v~~wd~~~~~-~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~-D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~  314 (320)
                        .|+.|++||+.+.. ++..... +...+....|++|+++|++||. |++||+|+..+.-....+.-....|.+|+.
T Consensus       233 ~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~  310 (493)
T PTZ00421        233 KSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLC  310 (493)
T ss_pred             CCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceE
Confidence              47899999987643 3333332 3346677789999999999884 999999997654333333334566766664

>KOG0640|consensus

Probab=99.98  E-value=1.1e-30  Score=209.98  Aligned_cols=277  Identities=22%  Similarity=0.365  Sum_probs=219.9

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEeccc-----------CCc---ccccccccccccCeEEEEecCCCCEE
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE-----------DDS---SAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~-----------~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      +..|...+.+.+|+|||.++++|+.|.+|++.|+...           +..   -..+.++.-|...|.++.|.|....|
T Consensus       108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~IL  187 (430)
T KOG0640|consen  108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETIL  187 (430)
T ss_pred             EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheE
Confidence            4567788899999999999999999999999998621           000   11245667789999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeeccc--CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc---CCcc--
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHG--HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG---HHNL--  153 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~---~~~~--  153 (320)
                      ++|++|++|++||.......+.++.  ...+|.++.|+|  .|++|+.|..-..+++||+++-+|...-.+   |...  
T Consensus       188 iS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHP--sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~  265 (430)
T KOG0640|consen  188 ISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHP--SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAIT  265 (430)
T ss_pred             EeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecC--CCceEEEecCCCceeEEeccceeEeeecCccccccccee
Confidence            9999999999999876433332221  345788888866  489999999999999999999887655432   2221  


Q ss_pred             -------------ccCCCeEEEEECcCCeeeeeec-CCC-CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec
Q psy14961        154 -------------ITDDKLVNIWDMRTGYCVQSFE-GHQ-SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       154 -------------~~~d~~i~iwd~~~~~~~~~~~-~~~-~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~  218 (320)
                                   .+.||.|++||--+++|+.++. .|. ..|+++.|..+|+++++.+.|..+++|.+.+++.+..+..
T Consensus       266 ~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG  345 (430)
T KOG0640|consen  266 QVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG  345 (430)
T ss_pred             EEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence                         2469999999999999998874 454 5799999999999999999999999999999999988865


Q ss_pred             Ccc---eeeeEEEEEecCCcEEEEEeC-CCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        219 DSI---LFGATSVDFSVSGRLLFAGYN-DYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       219 ~~~---~~~~~~~~~s~~~~~l~~g~~-dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ...   ..--+...|+....+++.-.+ .+.++-||.++..++.-+ .+|.+.+..|.=||.+..|++||.|..+|+|--
T Consensus       346 Ag~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  346 AGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             CCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence            421   111245567777777776653 567899998887665433 699999999999999999999999999999964

>KOG0305|consensus

Probab=99.98  E-value=6.6e-30  Score=223.53  Aligned_cols=255  Identities=26%  Similarity=0.427  Sum_probs=210.8

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~   79 (320)
                      +++|+..++.-..-....++.|+++.|+++|.+|+.|..+|.+.|||...    ......+.+ |...|.++.|.  +..
T Consensus       199 vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~----~k~~~~~~~~h~~rvg~laW~--~~~  272 (484)
T KOG0305|consen  199 VYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE----QKKTRTLRGSHASRVGSLAWN--SSV  272 (484)
T ss_pred             EEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhh----ccccccccCCcCceeEEEecc--Cce
Confidence            47999988774443444588999999999999999999999999999742    223345556 89999999997  567


Q ss_pred             EEEEeCCCeEEEEECCCcceeee-cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      +.+|+.|+.|..+|+...+.... +.+|..+|..+++++  ++.++++|+.|+.+.+||....                 
T Consensus       273 lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~--d~~~lASGgnDN~~~Iwd~~~~-----------------  333 (484)
T KOG0305|consen  273 LSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP--DGNQLASGGNDNVVFIWDGLSP-----------------  333 (484)
T ss_pred             EEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC--CCCeeccCCCccceEeccCCCc-----------------
Confidence            89999999999999987765544 888999999888854  6899999999999999997432                 


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR  235 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  235 (320)
                                .+...+..|...|..++|+|- ...||+|+  .|++|++||..++..+.......   .+.++.|++..+
T Consensus       334 ----------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgs---QVcsL~Wsk~~k  400 (484)
T KOG0305|consen  334 ----------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGS---QVCSLIWSKKYK  400 (484)
T ss_pred             ----------cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCC---ceeeEEEcCCCC
Confidence                      234455679999999999995 45788875  69999999999988776543332   356899999886


Q ss_pred             EEEE--EeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        236 LLFA--GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       236 ~l~~--g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      -|++  |+.++.|.||+..+..++..+.+|...|..+++||||..+++|+.|.|+|+|+.
T Consensus       401 Ei~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~  460 (484)
T KOG0305|consen  401 ELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNL  460 (484)
T ss_pred             EEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccc
Confidence            5555  567889999999888899999999999999999999999999999999999995

>KOG0275|consensus

Probab=99.97  E-value=5.6e-31  Score=212.91  Aligned_cols=270  Identities=21%  Similarity=0.343  Sum_probs=228.1

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCC----cccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD----SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ..+-+..|+|||+||++|+.||-|.+|+.-....    .......+..+..+|.|+.|+.+.+.+++|+.||.|++|.++
T Consensus       214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~  293 (508)
T KOG0275|consen  214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE  293 (508)
T ss_pred             cchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence            4566788999999999999999999998753321    222233556788999999999999999999999999999999


Q ss_pred             Ccceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCe
Q psy14961         96 SSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKL  159 (320)
Q Consensus        96 ~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~  159 (320)
                      ++.+++.|. +|...|.++.|+  .|+..+++++.|-.+++--+.+|+++..+.+|...+               +.|++
T Consensus       294 tG~ClRrFdrAHtkGvt~l~FS--rD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt  371 (508)
T KOG0275|consen  294 TGQCLRRFDRAHTKGVTCLSFS--RDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGT  371 (508)
T ss_pred             cchHHHHhhhhhccCeeEEEEc--cCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCcc
Confidence            999999886 899999998874  567899999999999999999999998888886544               35899


Q ss_pred             EEEEECcCCeeeeeecCC--CCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-eeeeEEEEEecCCc
Q psy14961        160 VNIWDMRTGYCVQSFEGH--QSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSI-LFGATSVDFSVSGR  235 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~--~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~  235 (320)
                      |++|+.++.+|+.+++..  .-+|+++-.-|. -..++.|...+++.|-++. ++.+..+..... ......+..||.|.
T Consensus       372 vkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGe  450 (508)
T KOG0275|consen  372 VKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGE  450 (508)
T ss_pred             EEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCc
Confidence            999999999999988654  457888888885 4689999999999999986 455555543222 22345677899999


Q ss_pred             EEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ++++.++|+.+..|...++...+++.-|+.-|-.++-+|..++|||=+.||++++|.
T Consensus       451 wiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  451 WIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            999999999999999999999999999999899999999999999999999999984

>KOG0296|consensus

Probab=99.97  E-value=3.4e-29  Score=205.12  Aligned_cols=275  Identities=18%  Similarity=0.292  Sum_probs=222.4

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..+..|...|.+++.+|+.++++|||.|..-.+|+....+    ...++.+|+..|+|+.|+.++.+|++|+-+|.|+||
T Consensus        58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge----~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE----FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF  133 (399)
T ss_pred             eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc----ceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence            4456788999999999999999999999999999986433    345678999999999999999999999999999999


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCC
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDD  157 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d  157 (320)
                      +..++.....+......+.=+.++|  .+..|+.|+.||.+.+|.+.++...+.+.+|...+               ..|
T Consensus       134 ~~stg~~~~~~~~e~~dieWl~WHp--~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d  211 (399)
T KOG0296|consen  134 KVSTGGEQWKLDQEVEDIEWLKWHP--RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD  211 (399)
T ss_pred             EcccCceEEEeecccCceEEEEecc--cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence            9999887777653344444466766  57899999999999999999876777777776432               258


Q ss_pred             CeEEEEECcCCeeeeeecCC-CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce---------eeeEE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGH-QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL---------FGATS  227 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~  227 (320)
                      ++|++|++.+++++..+.+- ..+..++.++..+..+.+|+.++.+++.+..+++.+.+.......         -++.+
T Consensus       212 gti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~  291 (399)
T KOG0296|consen  212 GTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVES  291 (399)
T ss_pred             ceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhh
Confidence            89999999999988777532 345678999999999999999999999998888877766531111         11223


Q ss_pred             EEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        228 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       228 ~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +.++..=++.|+|+.||+|.|||+...+. +..-.|..+|..+.|-+ ..+|++++.||.+|.||.+.
T Consensus       292 ~~~ss~lpL~A~G~vdG~i~iyD~a~~~~-R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRt  357 (399)
T KOG0296|consen  292 IPSSSKLPLAACGSVDGTIAIYDLAASTL-RHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDART  357 (399)
T ss_pred             cccccccchhhcccccceEEEEecccchh-heeccCCCceEEEEEcC-cchheeeccCceEEeeeccc
Confidence            44444556889999999999999876544 44567999999999999 78999999999999999643

>KOG0281|consensus

Probab=99.97  E-value=9.2e-32  Score=219.11  Aligned_cols=216  Identities=27%  Similarity=0.494  Sum_probs=183.1

Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      ....|+|+.+  +++.+++|..|++|+|||.++..++..+.+|.+.|.|+.+.    ...+++|+.|.+|++||.+++++
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd----~rviisGSSDsTvrvWDv~tge~  269 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD----ERVIVSGSSDSTVRVWDVNTGEP  269 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc----ceEEEecCCCceEEEEeccCCch
Confidence            4567899988  45689999999999999999999999999999999888763    46899999999999999999998


Q ss_pred             EEEeccCCcc-------------ccCCCeEEEEECcCCe---eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEEC
Q psy14961        144 VQSFEGHHNL-------------ITDDKLVNIWDMRTGY---CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL  207 (320)
Q Consensus       144 ~~~~~~~~~~-------------~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~  207 (320)
                      +.++-.|...             .+.|..+.+||+....   +...+.||...|+.+.|+.  +++++++.|.+|++|+.
T Consensus       270 l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~  347 (499)
T KOG0281|consen  270 LNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWST  347 (499)
T ss_pred             hhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc--ceEEEecCCceEEEEec
Confidence            7766555433             2468999999997643   3345789999999999984  59999999999999999


Q ss_pred             CCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961        208 RADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                      .+.+.+.....+..  ++..  .-..++++++|++|.+|++||+..+..++-+.||+.-|.+|.|.  .+.++||++||+
T Consensus       348 st~efvRtl~gHkR--GIAC--lQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGk  421 (499)
T KOG0281|consen  348 STCEFVRTLNGHKR--GIAC--LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGK  421 (499)
T ss_pred             cceeeehhhhcccc--ccee--hhccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceeeeccccce
Confidence            99887766555443  2332  23478999999999999999999999999999999999999994  578999999999


Q ss_pred             eEeeec
Q psy14961        288 LRDEES  293 (320)
Q Consensus       288 ir~~~~  293 (320)
                      ||+||.
T Consensus       422 ikvWdl  427 (499)
T KOG0281|consen  422 IKVWDL  427 (499)
T ss_pred             EEEEec
Confidence            999996

>KOG0266|consensus

Probab=99.97  E-value=3.2e-29  Score=226.37  Aligned_cols=229  Identities=30%  Similarity=0.560  Sum_probs=198.6

Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC-CC
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM-RT  140 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~-~~  140 (320)
                      +...|.|+.|+++++.+++++.|+.+++|+..+..  .+..+.+|...|.+++|++  +++++++++.|+.|++||+ ..
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~--d~~~l~s~s~D~tiriwd~~~~  235 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSP--DGSYLLSGSDDKTLRIWDLKDD  235 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECC--CCcEEEEecCCceEEEeeccCC
Confidence            36789999999999999999999999999997776  6777788999999998865  5789999999999999999 55


Q ss_pred             CcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEE
Q psy14961        141 GYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF  205 (320)
Q Consensus       141 ~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iw  205 (320)
                      +.+++++.+|...+               +.|++|++||++++++...+.+|...|.+++|++++.+|++++.|+.|++|
T Consensus       236 ~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vw  315 (456)
T KOG0266|consen  236 GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVW  315 (456)
T ss_pred             CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEE
Confidence            58889998887654               368999999999999999999999999999999999999999999999999


Q ss_pred             ECCCCee--EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC---ceeEEEECcCCCeEE
Q psy14961        206 DLRADKE--VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN---RVSCLQVSPDGTAFS  280 (320)
Q Consensus       206 d~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~---~i~~i~~s~~~~~l~  280 (320)
                      |+.++..  ............+..+.|+|++.++++++.|+.+++||+.+........+|..   ++.+...++++++++
T Consensus       316 d~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  395 (456)
T KOG0266|consen  316 DLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIY  395 (456)
T ss_pred             ECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEE
Confidence            9998873  23332222111468899999999999999999999999999888888888876   455556678999999


Q ss_pred             EecCCCceEeeecc
Q psy14961        281 SGSWDTTLRDEESK  294 (320)
Q Consensus       281 s~s~D~~ir~~~~~  294 (320)
                      +|+.|+.|++|+..
T Consensus       396 sg~~d~~v~~~~~~  409 (456)
T KOG0266|consen  396 SGSEDGSVYVWDSS  409 (456)
T ss_pred             EEeCCceEEEEeCC
Confidence            99999999999965

>KOG1407|consensus

Probab=99.97  E-value=4.8e-29  Score=195.97  Aligned_cols=262  Identities=23%  Similarity=0.288  Sum_probs=211.9

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe-cCCCCEEEEEeCCCeEEEEECC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      +|...|.+++|.-+|..|++|+.|+++++|+++..  .........+|.+.|..+.| +++...+++++.|.+|++||..
T Consensus        18 ~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~--r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r   95 (313)
T KOG1407|consen   18 GHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD--RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIR   95 (313)
T ss_pred             hhhhcceEEEEcccCceeeecccCCceEEEEecch--hhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEec
Confidence            45678999999999999999999999999998754  22334456788877766655 5567789999999999999999


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec-------------cCCccc-cCCCeEE
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE-------------GHHNLI-TDDKLVN  161 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~-------------~~~~~~-~~d~~i~  161 (320)
                      .+++........+.+. +.+  +|+|++++.++.|..|...|.++.+.....+             .+.-+. +..|.|.
T Consensus        96 ~~k~~~~i~~~~eni~-i~w--sp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~  172 (313)
T KOG1407|consen   96 SGKCTARIETKGENIN-ITW--SPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVE  172 (313)
T ss_pred             cCcEEEEeeccCcceE-EEE--cCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEE
Confidence            9999887765555543 344  6679999999999999999998765543221             111112 3457888


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                      |..-..-+++++++.|.....||.|+|+|++||+|+.|..+.+||+..--.+..+...  -+++..+.||.||++||+|+
T Consensus       173 ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRl--dwpVRTlSFS~dg~~lASaS  250 (313)
T KOG1407|consen  173 ILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRL--DWPVRTLSFSHDGRMLASAS  250 (313)
T ss_pred             EEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccc--cCceEEEEeccCcceeeccC
Confidence            8877788899999999999999999999999999999999999999865545555443  34678999999999999999


Q ss_pred             CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        242 NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       242 ~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      +|..|-|=++.++.++.+ .+|+++...++|+|...+||=+..|.
T Consensus       251 EDh~IDIA~vetGd~~~e-I~~~~~t~tVAWHPk~~LLAyA~ddk  294 (313)
T KOG1407|consen  251 EDHFIDIAEVETGDRVWE-IPCEGPTFTVAWHPKRPLLAYACDDK  294 (313)
T ss_pred             ccceEEeEecccCCeEEE-eeccCCceeEEecCCCceeeEEecCC
Confidence            999999999999988865 46899999999999999999887653

>KOG0274|consensus

Probab=99.97  E-value=2.5e-29  Score=227.26  Aligned_cols=259  Identities=25%  Similarity=0.427  Sum_probs=220.4

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ...+.+..|.  +.++++++.+++|++|+...   .......+.+|.+.|+++++...+.++++|+.|.++++||..+++
T Consensus       208 ~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~---~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~  282 (537)
T KOG0274|consen  208 DHVVLCLQLH--DGFFKSGSDDSTLHLWDLNN---GYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE  282 (537)
T ss_pred             cchhhhheee--cCeEEecCCCceeEEeeccc---ceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc
Confidence            4556677777  45899999999999998742   223334488999999999998878899999999999999999999


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-------------cCCCeEEEEEC
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------------TDDKLVNIWDM  165 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------------~~d~~i~iwd~  165 (320)
                      +...+.+|.+.+.++...    ...+++|+.|..|++|++.++.++..+.+|...+             +.|+.|++||.
T Consensus       283 C~~~l~gh~stv~~~~~~----~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~  358 (537)
T KOG0274|consen  283 CTHSLQGHTSSVRCLTID----PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDP  358 (537)
T ss_pred             EEEEecCCCceEEEEEcc----CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEh
Confidence            999999999999888764    3578889999999999999999999888776544             46889999999


Q ss_pred             cCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC
Q psy14961        166 RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY  244 (320)
Q Consensus       166 ~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg  244 (320)
                      ++++++.++.+|...|.++.+.+. ..+++|+.|++|++||+++. +.+..+..+....    -.+...+++|++++.|+
T Consensus       359 ~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v----~~l~~~~~~Lvs~~aD~  433 (537)
T KOG0274|consen  359 RTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLV----SSLLLRDNFLVSSSADG  433 (537)
T ss_pred             hhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccc----cccccccceeEeccccc
Confidence            999999999999999999988875 78999999999999999988 6655555554322    23456789999999999


Q ss_pred             eEEEEcCCCCeEEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        245 TINVWDSLKCCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       245 ~v~~wd~~~~~~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +|++||...+..+..+.+ |...|+.+++.  ...+++++.|+++++||.
T Consensus       434 ~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl  481 (537)
T KOG0274|consen  434 TIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDL  481 (537)
T ss_pred             cEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEec
Confidence            999999999999988888 67889999987  357899999999999995

>KOG0306|consensus

Probab=99.97  E-value=3.9e-29  Score=221.43  Aligned_cols=255  Identities=24%  Similarity=0.415  Sum_probs=209.4

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+||+..+.+++-.++  -.++.++.|.|.+++++.|...|.+.+||+.    +.....++..|.+.++++..+|++..+
T Consensus       396 ikiWn~~t~kciRTi~--~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdla----S~~l~Eti~AHdgaIWsi~~~pD~~g~  469 (888)
T KOG0306|consen  396 IKIWNRDTLKCIRTIT--CGYILASKFVPGDRYIVLGTKNGELQVFDLA----SASLVETIRAHDGAIWSISLSPDNKGF  469 (888)
T ss_pred             EEEEEccCcceeEEec--cccEEEEEecCCCceEEEeccCCceEEEEee----hhhhhhhhhccccceeeeeecCCCCce
Confidence            5799999999885544  4599999999999999999999999999985    333445677999999999999999999


Q ss_pred             EEEeCCCeEEEEECCC-----c---cee-----eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961         81 LTGSGDCTCALWDVES-----S---QLL-----QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~-----~---~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~  147 (320)
                      ++|+.|.+|++||..-     +   +.+     .++ .-...|.++.+  +|||.+|+.+--|.++++|-+.+-+     
T Consensus       470 vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~--Spdgk~LaVsLLdnTVkVyflDtlK-----  541 (888)
T KOG0306|consen  470 VTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSV--SPDGKLLAVSLLDNTVKVYFLDTLK-----  541 (888)
T ss_pred             EEecCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEE--cCCCcEEEEEeccCeEEEEEeccee-----
Confidence            9999999999998521     1   111     111 12455655554  6689999999989888888765532     


Q ss_pred             ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE-ecCcceeeeE
Q psy14961        148 EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY-KKDSILFGAT  226 (320)
Q Consensus       148 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~  226 (320)
                                            -..++-||.=||.|+.++||++.+++||.|+.|++|-++-|..-..+ .+..   .+.
T Consensus       542 ----------------------FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdD---Svm  596 (888)
T KOG0306|consen  542 ----------------------FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDD---SVM  596 (888)
T ss_pred             ----------------------eeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccC---cee
Confidence                                  23446689999999999999999999999999999988766543222 2222   357


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ++.|-|...++.+++.|+.|+-||..+...+..+.+|...|+|++.+|+|.+++|+|+|.+||+|+.+
T Consensus       597 ~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~t  664 (888)
T KOG0306|consen  597 SVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERT  664 (888)
T ss_pred             EEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeecc
Confidence            88999999999999999999999998888999999999999999999999999999999999999953

>KOG0277|consensus

Probab=99.97  E-value=2.4e-29  Score=196.99  Aligned_cols=246  Identities=22%  Similarity=0.350  Sum_probs=184.2

Q ss_pred             eCccceEEEEEcC-CCCEEEEec-------CCCeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEeCCC
Q psy14961         17 MPATWVMACAYAP-SGSVVASGG-------LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGSGDC   87 (320)
Q Consensus        17 ~~~~~V~~~~~~~-~~~~l~s~~-------~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg   87 (320)
                      ++...=.++.||| -.++||.+.       ..|.+.|.++..+ ........+. -...+..+.|++. ...+++++.||
T Consensus         6 tpgf~GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~-~gi~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDG   83 (311)
T KOG0277|consen    6 TPGFHGYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDP-KGIQECQSYD-TEDGLFDVAWSENHENQVIAASGDG   83 (311)
T ss_pred             cCCcccceeEecccccchhheeehhhcccccCceEEEEecCCC-CCeEEEEeee-cccceeEeeecCCCcceEEEEecCc
Confidence            3333336889998 233444331       2577777776411 1111222222 2455667777654 56788999999


Q ss_pred             eEEEEECCC-cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECc
Q psy14961         88 TCALWDVES-SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR  166 (320)
Q Consensus        88 ~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~  166 (320)
                      ++++||+.. ..++..++.|+.+|.++.+.+.. ...++++|+|++|++|+..-++.+.                     
T Consensus        84 SLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~-r~~~ltsSWD~TiKLW~~~r~~Sv~---------------------  141 (311)
T KOG0277|consen   84 SLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVR-RRIFLTSSWDGTIKLWDPNRPNSVQ---------------------  141 (311)
T ss_pred             eEEEeccCCCCcchhHHHhhhhheEEecccccc-ceeEEeeccCCceEeecCCCCcceE---------------------
Confidence            999999643 46888999999999999987653 4677888999999999987655443                     


Q ss_pred             CCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec-CCcEEEEEeCCC
Q psy14961        167 TGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV-SGRLLFAGYNDY  244 (320)
Q Consensus       167 ~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg  244 (320)
                            ++.+|...|..++|+|. .+.++++|.|+++++||++.......++.+.  ..+.++.|+. +...|+||+.|+
T Consensus       142 ------Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~--~Eil~cdw~ky~~~vl~Tg~vd~  213 (311)
T KOG0277|consen  142 ------TFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN--SEILCCDWSKYNHNVLATGGVDN  213 (311)
T ss_pred             ------eecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc--ceeEeecccccCCcEEEecCCCc
Confidence                  45667788999999995 6789999999999999998654443455444  3467888885 556899999999


Q ss_pred             eEEEEcCCC-CeEEEEeecCCCceeEEEECcC-CCeEEEecCCCceEeeecc
Q psy14961        245 TINVWDSLK-CCRVNHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       245 ~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~  294 (320)
                      .|+.||+++ ..++..+.+|.-.|..++|||. ..+|||||+|.|+|+|+.+
T Consensus       214 ~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~  265 (311)
T KOG0277|consen  214 LVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPE  265 (311)
T ss_pred             eEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccc
Confidence            999999876 4578889999999999999994 6689999999999999953

>KOG0289|consensus

Probab=99.97  E-value=8.6e-29  Score=206.87  Aligned_cols=266  Identities=25%  Similarity=0.339  Sum_probs=225.0

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      .+.++...|..+.+++|+.|..+-++|..    +......+.+|...|+.+.+.++...+++++.|..|++|........
T Consensus       221 gi~ald~~~s~~~ilTGG~d~~av~~d~~----s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~  296 (506)
T KOG0289|consen  221 GITALDIIPSSSKILTGGEDKTAVLFDKP----SNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEP  296 (506)
T ss_pred             CeeEEeecCCCCcceecCCCCceEEEecc----hhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCc
Confidence            46677777777899999999999999864    44556778999999999999999989999999999999998877777


Q ss_pred             eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC--------------c---cccCCCeEEEE
Q psy14961        101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH--------------N---LITDDKLVNIW  163 (320)
Q Consensus       101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~--------------~---~~~~d~~i~iw  163 (320)
                      .....|.++|+.+..+|  .|++|++++.|+.....|++++.++.......              .   ..+.|+.+++|
T Consensus       297 ~~~~~h~~~V~~ls~h~--tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiw  374 (506)
T KOG0289|consen  297 TSSRPHEEPVTGLSLHP--TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIW  374 (506)
T ss_pred             cccccccccceeeeecc--CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEE
Confidence            77788999999988866  58999999999999999999998765433211              1   11468999999


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      |+.++..+..|.+|.++|.+++|+.+|.+||+++.|+.|++||+|..+....+...... ++.++.|.+.|++|+.++++
T Consensus       375 dlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~-~v~s~~fD~SGt~L~~~g~~  453 (506)
T KOG0289|consen  375 DLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK-EVNSLSFDQSGTYLGIAGSD  453 (506)
T ss_pred             EcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc-cceeEEEcCCCCeEEeecce
Confidence            99999999999999999999999999999999999999999999987766655544332 56889999999999999888


Q ss_pred             CeEEEEcC--CCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        244 YTINVWDS--LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       244 g~v~~wd~--~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      =+|.+++.  .+...+.++..|.+..+++.|..+.++++++|.|...|++..
T Consensus       454 l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  454 LQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             eEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            77777762  345677778889999999999999999999999999888754

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=5.6e-28  Score=219.21  Aligned_cols=244  Identities=15%  Similarity=0.189  Sum_probs=178.3

Q ss_pred             ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEeCCCeEEEEECCCcc--------eeeecccCc
Q psy14961         37 GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGSGDCTCALWDVESSQ--------LLQSFHGHT  107 (320)
Q Consensus        37 ~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~--------~~~~~~~~~  107 (320)
                      |+.++.+++|+....    .....+.+|...|.++.|+++ +..|++|+.|++|++||+.++.        ++..+.+|.
T Consensus        50 GG~~gvI~L~~~~r~----~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~  125 (568)
T PTZ00420         50 GGLIGAIRLENQMRK----PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK  125 (568)
T ss_pred             CCceeEEEeeecCCC----ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCC
Confidence            567888999986431    234567889999999999986 6899999999999999987532        334577899


Q ss_pred             cceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE
Q psy14961        108 GELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF  186 (320)
Q Consensus       108 ~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~  186 (320)
                      ..|.+++|+|.  +. .+++++.|+.|++||+++++.+..+                           . |...|.+++|
T Consensus       126 ~~V~sVaf~P~--g~~iLaSgS~DgtIrIWDl~tg~~~~~i---------------------------~-~~~~V~Slsw  175 (568)
T PTZ00420        126 KKISIIDWNPM--NYYIMCSSGFDSFVNIWDIENEKRAFQI---------------------------N-MPKKLSSLKW  175 (568)
T ss_pred             CcEEEEEECCC--CCeEEEEEeCCCeEEEEECCCCcEEEEE---------------------------e-cCCcEEEEEE
Confidence            99999999764  44 4678999999999999876543221                           1 3456899999


Q ss_pred             cCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee---eeEEEEEecCCcEEEEEeCC----CeEEEEcCCC-CeEEE
Q psy14961        187 HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF---GATSVDFSVSGRLLFAGYND----YTINVWDSLK-CCRVN  258 (320)
Q Consensus       187 ~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~l~~g~~d----g~v~~wd~~~-~~~~~  258 (320)
                      +|+|..|++++.|+.|+|||+++++.+..+..+....   .+....|++++.+|++++.+    ++|+|||+.. ..++.
T Consensus       176 spdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~  255 (568)
T PTZ00420        176 NIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALV  255 (568)
T ss_pred             CCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceE
Confidence            9999999999999999999999988776665443211   11223467899998887765    4799999874 34444


Q ss_pred             Ee--ecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceE
Q psy14961        259 HL--MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT  314 (320)
Q Consensus       259 ~~--~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~  314 (320)
                      ..  ..+.+.+......++|.+|++|+.|++||+|+....+..++-.-....|.+|+-
T Consensus       256 ~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~  313 (568)
T PTZ00420        256 TMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFG  313 (568)
T ss_pred             EEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceE
Confidence            33  233444445555667999999999999999997554433333334556666553

>KOG1036|consensus

Probab=99.97  E-value=1e-28  Score=198.42  Aligned_cols=258  Identities=21%  Similarity=0.333  Sum_probs=203.9

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      |...|+++.|+|.++.|+.+++||++++|+++..     .......|..++.+|.|.+ ...+++|+-||.|+.+|++++
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~-----~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~   85 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN-----SLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG   85 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccch-----hhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCC
Confidence            4679999999999999999999999999998643     1223346889999999976 568999999999999999987


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-----------ccCCccc-cCCCeEEEEEC
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-----------EGHHNLI-TDDKLVNIWDM  165 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-----------~~~~~~~-~~d~~i~iwd~  165 (320)
                      .... +..|..++.++...+.  ...+++|++|+.|++||.+...+...+           .++.-++ +.+..+.+||+
T Consensus        86 ~~~~-igth~~~i~ci~~~~~--~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDL  162 (323)
T KOG1036|consen   86 NEDQ-IGTHDEGIRCIEYSYE--VGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDL  162 (323)
T ss_pred             ccee-eccCCCceEEEEeecc--CCeEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecCceEEEEEc
Confidence            7543 4569999999988754  458999999999999999854333222           2333344 67889999999


Q ss_pred             cCCeeeeee--cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe----eEeEEec-------CcceeeeEEEEEec
Q psy14961        166 RTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK----EVACYKK-------DSILFGATSVDFSV  232 (320)
Q Consensus       166 ~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~----~~~~~~~-------~~~~~~~~~~~~s~  232 (320)
                      ++...-.+.  ....-.+.|+++-|++.-+++++-||.+.+=.++..+    ....|.-       ....+++.+++|+|
T Consensus       163 Rn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp  242 (323)
T KOG1036|consen  163 RNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHP  242 (323)
T ss_pred             ccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecc
Confidence            986433221  1234468999999998889999999998887666541    1112221       12346789999999


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961        233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                      --..+|||+.||.|.+||..+.+++.++...+..|..++|+.||.+||+|+.
T Consensus       243 ~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  243 IHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             ccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            9999999999999999999999999999888889999999999999999974

>KOG0265|consensus

Probab=99.97  E-value=3.7e-29  Score=200.19  Aligned_cols=238  Identities=26%  Similarity=0.450  Sum_probs=198.2

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC-CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE-SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      .+.+|.+.|..+.|.|++..+++|+.|+.|.+|++. ..+-...+++|++.|+.+.+  ..+++.+++++.|..++.||+
T Consensus        42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~--~~d~s~i~S~gtDk~v~~wD~  119 (338)
T KOG0265|consen   42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHG--MRDGSHILSCGTDKTVRGWDA  119 (338)
T ss_pred             hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeee--ccCCCEEEEecCCceEEEEec
Confidence            467899999999999999999999999999999964 34445677899999988876  557899999999999999999


Q ss_pred             CCCcEEEEeccCCccc----------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961        139 RTGYCVQSFEGHHNLI----------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC  202 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~----------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i  202 (320)
                      ++|++++.+.+|...+                .+|+++++||+|+..++++++ .+-+++++.|..++..+.+|+-|+.|
T Consensus       120 ~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~i  198 (338)
T KOG0265|consen  120 ETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDI  198 (338)
T ss_pred             ccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCce
Confidence            9999999988887654                369999999999988887764 34578999999999999999999999


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC----CeEEEEeecCC----CceeEEEECc
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK----CCRVNHLMGHE----NRVSCLQVSP  274 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~----~~~~~~~~~h~----~~i~~i~~s~  274 (320)
                      ++||++.+..+.....+..  .++.+..+|+|.++.+-+.|.++++||...    .+.+..+.+|.    ......+|||
T Consensus       199 kvWd~r~~d~~~~lsGh~D--tIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp  276 (338)
T KOG0265|consen  199 KVWDLRKNDGLYTLSGHAD--TITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSP  276 (338)
T ss_pred             eeeccccCcceEEeecccC--ceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccC
Confidence            9999987766555444432  367889999999999999999999999754    23355666653    2456779999


Q ss_pred             CCCeEEEecCCCceEeeecchHhhhhee
Q psy14961        275 DGTAFSSGSWDTTLRDEESKNRYVQYLL  302 (320)
Q Consensus       275 ~~~~l~s~s~D~~ir~~~~~~~~~~~~~  302 (320)
                      +++.+..||.|+.+.+||+..+--.|++
T Consensus       277 ~~~~i~ags~dr~vyvwd~~~r~~lykl  304 (338)
T KOG0265|consen  277 NGTKITAGSADRFVYVWDTTSRRILYKL  304 (338)
T ss_pred             CCCccccccccceEEEeecccccEEEEc
Confidence            9999999999999999998665444444

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.97  E-value=4.9e-28  Score=205.05  Aligned_cols=232  Identities=39%  Similarity=0.673  Sum_probs=197.6

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      .+.+|...|.++.|+++++.+++++.||.+++|++.+++....+..|...+..+.+.+  +++.+++++.|+.|++||+.
T Consensus         4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200           4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA--DGTYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECC--CCCEEEEEcCCCeEEEEEcC
Confidence            4668999999999999999999999999999999998887778888888887777754  56799999999999999998


Q ss_pred             CCcEEEEeccCCcc--------------cc-CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEE
Q psy14961        140 TGYCVQSFEGHHNL--------------IT-DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRL  204 (320)
Q Consensus       140 ~~~~~~~~~~~~~~--------------~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~i  204 (320)
                      .++.+..+..+...              .. .++.+.+||+++++....+..|...|.+++|+|++.++++++.|+.+++
T Consensus        82 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i  161 (289)
T cd00200          82 TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL  161 (289)
T ss_pred             cccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEE
Confidence            86655554433311              12 3889999999998888888899999999999999888888888999999


Q ss_pred             EECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961        205 FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       205 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                      ||++.++....+..+..  .+..+.|+|+++.+++++.++.|.+||......+..+..|...|.+++|+|++.++++++.
T Consensus       162 ~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  239 (289)
T cd00200         162 WDLRTGKCVATLTGHTG--EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSE  239 (289)
T ss_pred             EEccccccceeEecCcc--ccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcC
Confidence            99987776665554322  3578899999999999999999999999888888888789999999999999999999999


Q ss_pred             CCceEeeecch
Q psy14961        285 DTTLRDEESKN  295 (320)
Q Consensus       285 D~~ir~~~~~~  295 (320)
                      |+.+++|+...
T Consensus       240 ~~~i~i~~~~~  250 (289)
T cd00200         240 DGTIRVWDLRT  250 (289)
T ss_pred             CCcEEEEEcCC
Confidence            99999999754

>KOG0283|consensus

Probab=99.97  E-value=5e-29  Score=223.72  Aligned_cols=245  Identities=22%  Similarity=0.312  Sum_probs=195.0

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEeccc----------------------------CC---------------
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE----------------------------DD---------------   53 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~----------------------------~~---------------   53 (320)
                      .|.+.|++|.||+||+|||+||.|+.|+||.+-..                            ..               
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~  344 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ  344 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence            57789999999999999999999999999987430                            00               


Q ss_pred             -------------cccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCC
Q psy14961         54 -------------SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET  120 (320)
Q Consensus        54 -------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  120 (320)
                                   .......+.+|.+.|..+.|+. .++|++++.|.+||+|++....++..|. |..-|+|++|+|.. 
T Consensus       345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvD-  421 (712)
T KOG0283|consen  345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVD-  421 (712)
T ss_pred             CccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccC-
Confidence                         0012234567999999999987 4699999999999999999999999886 99999999999984 


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEE-ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIW-DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       121 ~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iw-d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                      .++|++|+-|+.||||++...++                 ..| |+            ..-|++++|.|+|++.+.|+-+
T Consensus       422 DryFiSGSLD~KvRiWsI~d~~V-----------------v~W~Dl------------~~lITAvcy~PdGk~avIGt~~  472 (712)
T KOG0283|consen  422 DRYFISGSLDGKVRLWSISDKKV-----------------VDWNDL------------RDLITAVCYSPDGKGAVIGTFN  472 (712)
T ss_pred             CCcEeecccccceEEeecCcCee-----------------Eeehhh------------hhhheeEEeccCCceEEEEEec
Confidence            58999999999999999865443                 333 22            2458999999999999999999


Q ss_pred             CeEEEEECCCCeeEeEEec-----Ccc-eeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCCeEEEEeecCCC--ceeEE
Q psy14961        200 ATCRLFDLRADKEVACYKK-----DSI-LFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKCCRVNHLMGHEN--RVSCL  270 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~-----~~~-~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~--~i~~i  270 (320)
                      |.+++|+....+......-     .+. .-.++.+.|.|... -+++.++|..|+|||.....++..|.|+.+  .=...
T Consensus       473 G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~A  552 (712)
T KOG0283|consen  473 GYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISA  552 (712)
T ss_pred             cEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceee
Confidence            9999999887665433321     111 11367777776443 466777899999999877777777776643  33567


Q ss_pred             EECcCCCeEEEecCCCceEeeec
Q psy14961        271 QVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       271 ~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .|++||++|++||.|..+.+|+.
T Consensus       553 sfs~Dgk~IVs~seDs~VYiW~~  575 (712)
T KOG0283|consen  553 SFSSDGKHIVSASEDSWVYIWKN  575 (712)
T ss_pred             eEccCCCEEEEeecCceEEEEeC
Confidence            89999999999999999999996

>KOG0316|consensus

Probab=99.97  E-value=3.8e-29  Score=193.90  Aligned_cols=232  Identities=25%  Similarity=0.350  Sum_probs=200.1

Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ....+..++++|..+.|.-+|++.++++.|++|++|++..+.+++++.+|..+|..++.  +.|...|++++.|..+.+|
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~--s~Dnskf~s~GgDk~v~vw   86 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAAL--SSDNSKFASCGGDKAVQVW   86 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccc--cccccccccCCCCceEEEE
Confidence            34567789999999999999999999999999999999999999999999999977765  4456789999999999999


Q ss_pred             eCCCCcEEEEeccCCcccc---------------CCCeEEEEECcC--CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        137 DMRTGYCVQSFEGHHNLIT---------------DDKLVNIWDMRT--GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       137 d~~~~~~~~~~~~~~~~~~---------------~d~~i~iwd~~~--~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                      |+++|++++.|.+|...+.               -|..+++||.++  .++++.+......|.++...  +.-+++|+.|
T Consensus        87 DV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~D  164 (307)
T KOG0316|consen   87 DVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVD  164 (307)
T ss_pred             EcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccC
Confidence            9999999999998875442               378899999986  46888888888899999988  4578999999


Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce--eEEEECcCCC
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV--SCLQVSPDGT  277 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i--~~i~~s~~~~  277 (320)
                      |+++.||++.++....+-.+    +++++.|+++++..+.++-++++++-|..+++.+....+|.+.=  ...+++....
T Consensus       165 GtvRtydiR~G~l~sDy~g~----pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdt  240 (307)
T KOG0316|consen  165 GTVRTYDIRKGTLSSDYFGH----PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDT  240 (307)
T ss_pred             CcEEEEEeecceeehhhcCC----cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccce
Confidence            99999999988765544333    46899999999999999999999999999999999999998743  3456667677


Q ss_pred             eEEEecCCCceEeeecchH
Q psy14961        278 AFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       278 ~l~s~s~D~~ir~~~~~~~  296 (320)
                      .+++||.||.+.+|+..+.
T Consensus       241 hV~sgSEDG~Vy~wdLvd~  259 (307)
T KOG0316|consen  241 HVFSGSEDGKVYFWDLVDE  259 (307)
T ss_pred             eEEeccCCceEEEEEeccc
Confidence            8999999999999997554

>KOG0772|consensus

Probab=99.97  E-value=1.4e-28  Score=209.61  Aligned_cols=281  Identities=24%  Similarity=0.284  Sum_probs=213.1

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      +.-+...|+++++.|.|.++++||.|..+++||+...+.+-.....+. .....|.++.|++.+..|++.+..-..+++|
T Consensus       163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D  242 (641)
T KOG0772|consen  163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD  242 (641)
T ss_pred             ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc
Confidence            344567899999999999999999999999999965433322233333 2345688999999999999888888999999


Q ss_pred             CCCcceee------------ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-EEE--------------
Q psy14961         94 VESSQLLQ------------SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-VQS--------------  146 (320)
Q Consensus        94 ~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-~~~--------------  146 (320)
                      -.....+.            .-++|...+.+.+|+|... +.|++++.||++|+||++..+. ...              
T Consensus       243 RdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k-~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t  321 (641)
T KOG0772|consen  243 RDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNK-EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT  321 (641)
T ss_pred             cCCceeeeeeccchhhhhhhccCCceeeeeccccccCcc-cceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence            76543322            2357888999999999864 6799999999999999975431 111              


Q ss_pred             ---eccCCcc---ccCCCeEEEEECcCCe--ee-eeecCCCC--CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe-eEe
Q psy14961        147 ---FEGHHNL---ITDDKLVNIWDMRTGY--CV-QSFEGHQS--DVNSVKFHPSGDAVATGSDDATCRLFDLRADK-EVA  214 (320)
Q Consensus       147 ---~~~~~~~---~~~d~~i~iwd~~~~~--~~-~~~~~~~~--~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~-~~~  214 (320)
                         ++.....   .+.||.|.+|+.+...  +. ..-..|..  .|+||+||++|++|++-+.|+++++||++..+ ++.
T Consensus       322 sC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~  401 (641)
T KOG0772|consen  322 SCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLN  401 (641)
T ss_pred             eeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchh
Confidence               1111111   2468999999975532  11 22245766  89999999999999999999999999998754 344


Q ss_pred             EEecCcceeeeEEEEEecCCcEEEEEeC------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCce
Q psy14961        215 CYKKDSILFGATSVDFSVSGRLLFAGYN------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL  288 (320)
Q Consensus       215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~i  288 (320)
                      ....-...+..+.+.|||+.++|++|+.      .|.+.+||..+...+..+.--...|..+.|+|.-+.++.|+.||++
T Consensus       402 ~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~  481 (641)
T KOG0772|consen  402 VRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTA  481 (641)
T ss_pred             hhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCce
Confidence            4444334455678999999999999974      5789999988887777776567889999999988888999999999


Q ss_pred             EeeecchH
Q psy14961        289 RDEESKNR  296 (320)
Q Consensus       289 r~~~~~~~  296 (320)
                      +++=-.+.
T Consensus       482 ~vyYdp~~  489 (641)
T KOG0772|consen  482 HVYYDPNE  489 (641)
T ss_pred             EEEECccc
Confidence            97754333

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.1e-27  Score=216.14  Aligned_cols=231  Identities=19%  Similarity=0.224  Sum_probs=178.1

Q ss_pred             EEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEecCCC-CEEEEEeCCCeE
Q psy14961         15 VTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIFPNSD-QQILTGSGDCTC   89 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v   89 (320)
                      +..|...|++++|+| ++++|++|+.|++|++|++.....   .......+.+|...|.++.|++++ +.|++|+.|++|
T Consensus        71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV  150 (493)
T PTZ00421         71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV  150 (493)
T ss_pred             EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence            456788999999999 889999999999999999853321   112344677899999999999875 689999999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      +|||+++++.+..+..|...|.+++|++  +|..|++++.|+.|++||+++++.+..+.                     
T Consensus       151 rIWDl~tg~~~~~l~~h~~~V~sla~sp--dG~lLatgs~Dg~IrIwD~rsg~~v~tl~---------------------  207 (493)
T PTZ00421        151 NVWDVERGKAVEVIKCHSDQITSLEWNL--DGSLLCTTSKDKKLNIIDPRDGTIVSSVE---------------------  207 (493)
T ss_pred             EEEECCCCeEEEEEcCCCCceEEEEEEC--CCCEEEEecCCCEEEEEECCCCcEEEEEe---------------------
Confidence            9999999998888889999999998865  68899999999999999998876554443                     


Q ss_pred             eeeeecCCCCC-eEEEEEcCCCCEEEEee----CCCeEEEEECCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEe-C
Q psy14961        170 CVQSFEGHQSD-VNSVKFHPSGDAVATGS----DDATCRLFDLRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGY-N  242 (320)
Q Consensus       170 ~~~~~~~~~~~-v~~v~~~p~g~~l~s~s----~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~  242 (320)
                            +|... +..+.|+|++..+++++    .|+.|++||++.... +.....+. ........|++++.+|++|+ .
T Consensus       208 ------~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~-~~~~~~~~~d~d~~~L~lggkg  280 (493)
T PTZ00421        208 ------AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ-SSALFIPFFDEDTNLLYIGSKG  280 (493)
T ss_pred             ------cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC-CCceEEEEEcCCCCEEEEEEeC
Confidence                  34332 34577888887777654    479999999986542 22222111 11234567899999999887 5


Q ss_pred             CCeEEEEcCCCCeEEEEee-cCCCceeEEEECcC
Q psy14961        243 DYTINVWDSLKCCRVNHLM-GHENRVSCLQVSPD  275 (320)
Q Consensus       243 dg~v~~wd~~~~~~~~~~~-~h~~~i~~i~~s~~  275 (320)
                      |+.|++||+.+...+.... .+..++.+++|.|.
T Consensus       281 Dg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        281 EGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             CCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence            9999999998877665543 34567889999985

>KOG0294|consensus

Probab=99.97  E-value=1.7e-28  Score=197.56  Aligned_cols=243  Identities=22%  Similarity=0.363  Sum_probs=192.4

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC--EEEEEeCCCeEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ--QILTGSGDCTCA   90 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~v~   90 (320)
                      +.+..|...+++++.  ++.++++||.|.+|+|||+..    ......+..|.+.|+++.|.++-.  .|++|+.||.|.
T Consensus        37 F~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k----~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~  110 (362)
T KOG0294|consen   37 FAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRK----RKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHII  110 (362)
T ss_pred             ccccccccceeEEEe--cceeEeccCCCCcEEEEeccc----hhhhcceeccccceEEEEecCCcchhheeeecCCCcEE
Confidence            345567778888776  477999999999999999852    233456778999999999966543  899999999999


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      +|+...-.++..+++|.+.|+.++++|+  +++.++.+.|+.+++||+-.|+.-...+                ++    
T Consensus       111 iw~~~~W~~~~slK~H~~~Vt~lsiHPS--~KLALsVg~D~~lr~WNLV~Gr~a~v~~----------------L~----  168 (362)
T KOG0294|consen  111 IWRVGSWELLKSLKAHKGQVTDLSIHPS--GKLALSVGGDQVLRTWNLVRGRVAFVLN----------------LK----  168 (362)
T ss_pred             EEEcCCeEEeeeecccccccceeEecCC--CceEEEEcCCceeeeehhhcCccceeec----------------cC----
Confidence            9999999999999999999999998775  7888999999999999997775322211                11    


Q ss_pred             eeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        171 VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                            +  .-..+.|+|.|++++.++.+ .|-+|.+..............   +..+.|. ++..|++|..++.|.+||
T Consensus       169 ------~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r---~l~~~~l-~~~~L~vG~d~~~i~~~D  235 (362)
T KOG0294|consen  169 ------N--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENPKR---ILCATFL-DGSELLVGGDNEWISLKD  235 (362)
T ss_pred             ------C--cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcccc---ceeeeec-CCceEEEecCCceEEEec
Confidence                  1  12348999999999888877 588998876544332222211   2233343 677899999999999999


Q ss_pred             CCCCeEEEEeecCCCceeEEEE--CcCCCeEEEecCCCceEeeecchH
Q psy14961        251 SLKCCRVNHLMGHENRVSCLQV--SPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       251 ~~~~~~~~~~~~h~~~i~~i~~--s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ..+..+...+.+|.+.|.++.+  .|++.+|+|+|.||.|++|+..+.
T Consensus       236 ~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  236 TDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             cCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            9988899999999999999984  367899999999999999996444

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=2e-27  Score=215.69  Aligned_cols=250  Identities=14%  Similarity=0.166  Sum_probs=179.7

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCc----ccccccccccccCeEEEEecCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDS----SAKKKTVATHTSFISCCIFPNS   76 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~   76 (320)
                      .+|+..+......+..|...|.+++|+|+ +.+|++|+.|+.|++|++......    ......+.+|...|.++.|+++
T Consensus        57 ~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~  136 (568)
T PTZ00420         57 RLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPM  136 (568)
T ss_pred             EeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCC
Confidence            46776666566667778899999999996 789999999999999998532211    0122346789999999999998


Q ss_pred             CCEE-EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc
Q psy14961         77 DQQI-LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT  155 (320)
Q Consensus        77 ~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~  155 (320)
                      +..+ ++++.|++|++||+.+++.+..+. |...|.+++|+  ++|.+|++++.|+.|++||++++..+..+.+|.....
T Consensus       137 g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slsws--pdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~  213 (568)
T PTZ00420        137 NYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWN--IKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKN  213 (568)
T ss_pred             CCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEEC--CCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCce
Confidence            8764 688999999999999988776665 56778888775  4689999999999999999998877665554432110


Q ss_pred             CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC----eEEEEECCC-CeeEeEEecCcceeeeEEEEE
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA----TCRLFDLRA-DKEVACYKKDSILFGATSVDF  230 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~  230 (320)
                                            ...+....|++++.++++++.|+    +|+|||++. .+++.....+.....+...-.
T Consensus       214 ----------------------s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D  271 (568)
T PTZ00420        214 ----------------------TKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYD  271 (568)
T ss_pred             ----------------------eEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeee
Confidence                                  00123345678999999988774    799999985 444444333222111112222


Q ss_pred             ecCCcEEEEEeCCCeEEEEcCCCCeEEEEee--cCCCceeEEEECcCCC
Q psy14961        231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLM--GHENRVSCLQVSPDGT  277 (320)
Q Consensus       231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~--~h~~~i~~i~~s~~~~  277 (320)
                      .++|.++++|..|+.|++|+..... +..+.  .+..++.+++|.|.-.
T Consensus       272 ~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr~  319 (568)
T PTZ00420        272 ESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQI  319 (568)
T ss_pred             CCCCCEEEEEECCCeEEEEEccCCc-EEeecccccCCCccceEEccccc
Confidence            4568899999999999999986543 22232  2567899999999643

>KOG0645|consensus

Probab=99.97  E-value=1.5e-27  Score=188.53  Aligned_cols=207  Identities=25%  Similarity=0.375  Sum_probs=171.0

Q ss_pred             cccccccccCeEEEEecCC-CCEEEEEeCCCeEEEEECCCc---ceeeec-ccCccceeEEEEeeCCCCCEEEEEeCCCe
Q psy14961         58 KKTVATHTSFISCCIFPNS-DQQILTGSGDCTCALWDVESS---QLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKL  132 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~  132 (320)
                      ...+.+|.+.+.+++|.|. |..|++++.|+.|++|+...+   .+...+ .+|+..|+++++.|  .|++|+++|-|.+
T Consensus         7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp--~g~~La~aSFD~t   84 (312)
T KOG0645|consen    7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSP--HGRYLASASFDAT   84 (312)
T ss_pred             EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecC--CCcEEEEeeccce
Confidence            3456789899999999887 678999999999999998742   222222 36889999998855  5899999999999


Q ss_pred             EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee
Q psy14961        133 VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE  212 (320)
Q Consensus       133 i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~  212 (320)
                      +-+|.-..+                         ..+++.+++||..+|.|++|+++|++||+|++|+.+-||.+..+..
T Consensus        85 ~~Iw~k~~~-------------------------efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE  139 (312)
T KOG0645|consen   85 VVIWKKEDG-------------------------EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE  139 (312)
T ss_pred             EEEeecCCC-------------------------ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc
Confidence            999965432                         2357788999999999999999999999999999999999986654


Q ss_pred             EeE---EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC---CCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        213 VAC---YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL---KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       213 ~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~---~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      ..+   ...+.  ..+-.+.|+|...+|++++.|.+|++|+-.   ....+.++.+|++.|++++|+|.|..|++++.|+
T Consensus       140 fec~aVL~~Ht--qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~  217 (312)
T KOG0645|consen  140 FECIAVLQEHT--QDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDG  217 (312)
T ss_pred             EEEEeeecccc--ccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCc
Confidence            332   22222  234568899999999999999999999754   3466888999999999999999999999999999


Q ss_pred             ceEeeec
Q psy14961        287 TLRDEES  293 (320)
Q Consensus       287 ~ir~~~~  293 (320)
                      ++++|..
T Consensus       218 tv~Iw~~  224 (312)
T KOG0645|consen  218 TVSIWRL  224 (312)
T ss_pred             ceEeeee
Confidence            9999993

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=2.6e-27  Score=228.65  Aligned_cols=251  Identities=18%  Similarity=0.282  Sum_probs=192.4

Q ss_pred             CCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc----c----eeeecccCccce
Q psy14961         40 DNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS----Q----LLQSFHGHTGEL  110 (320)
Q Consensus        40 dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~----~~~~~~~~~~~v  110 (320)
                      +|.+++|+...-... ......+..|...|.++.|+++++++++|+.|+.|+||+.+..    .    +...+. +...+
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v  535 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL  535 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence            566777765321111 0111235568999999999999999999999999999997532    1    122222 34567


Q ss_pred             eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----------------cCCCeEEEEECcCCeeeeee
Q psy14961        111 MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI----------------TDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus       111 ~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~----------------~~d~~i~iwd~~~~~~~~~~  174 (320)
                      .++++.+. .+..|++++.||.|++||+.+++.+..+.+|...+                +.|+.|++||++++.++..+
T Consensus       536 ~~l~~~~~-~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~  614 (793)
T PLN00181        536 SGICWNSY-IKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI  614 (793)
T ss_pred             eeEEeccC-CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence            77877654 46789999999999999999888777766554322                35889999999999888888


Q ss_pred             cCCCCCeEEEEEc-CCCCEEEEeeCCCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        175 EGHQSDVNSVKFH-PSGDAVATGSDDATCRLFDLRADK-EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       175 ~~~~~~v~~v~~~-p~g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      ..+ ..|.+++|+ ++|.+|++|+.||.|++||++..+ .+..+..+.  ..+..+.|. ++.+|++++.|++|++||+.
T Consensus       615 ~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~--~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~  690 (793)
T PLN00181        615 KTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHS--KTVSYVRFV-DSSTLVSSSTDNTLKLWDLS  690 (793)
T ss_pred             ecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCC--CCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence            754 678999995 578999999999999999998754 233333222  235678886 78899999999999999976


Q ss_pred             C------CeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        253 K------CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       253 ~------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .      ..++.++.+|...+++++|+|++++|++|+.|+++++|+....
T Consensus       691 ~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~  740 (793)
T PLN00181        691 MSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP  740 (793)
T ss_pred             CCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence            3      2467788999999999999999999999999999999996543

>KOG0641|consensus

Probab=99.96  E-value=4.7e-26  Score=176.00  Aligned_cols=273  Identities=25%  Similarity=0.379  Sum_probs=215.3

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecc-c------CC----cccccccccccccCeEEEEecCCCCEEEEEeCCC
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIAL-E------DD----SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC   87 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~-~------~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg   87 (320)
                      ...|.+++|+|.|.+.+.|+...+.+|-.... .      +.    .....+.-..|.+.|+|..|++.|+.|++|++|.
T Consensus        32 sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk  111 (350)
T KOG0641|consen   32 SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDK  111 (350)
T ss_pred             hhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCc
Confidence            45799999999999999999999888764321 0      00    0112233456899999999999999999999999


Q ss_pred             eEEEEECC--Ccce---eeecccCccceeEEEEee--CCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccc-----
Q psy14961         88 TCALWDVE--SSQL---LQSFHGHTGELMDLDLAP--SETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLI-----  154 (320)
Q Consensus        88 ~v~iwd~~--~~~~---~~~~~~~~~~v~~~~~~~--~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~-----  154 (320)
                      +|++...+  +.+.   -..+..|.+.|..++|..  ...|..|++++. |-.|.+=|...|+....+.+|...+     
T Consensus       112 ~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilalys  191 (350)
T KOG0641|consen  112 TIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALYS  191 (350)
T ss_pred             eEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEEE
Confidence            99987553  3322   245677999999999863  344556676654 5567777888888888888776433     


Q ss_pred             ---------cCCCeEEEEECcCCeeeeeecC--C-----CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec
Q psy14961        155 ---------TDDKLVNIWDMRTGYCVQSFEG--H-----QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       155 ---------~~d~~i~iwd~~~~~~~~~~~~--~-----~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~  218 (320)
                               +.|++|++||++-..++.++..  |     ...|.+++..|.|+.|++|-+|....+||++.+++++.+..
T Consensus       192 wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~p  271 (350)
T KOG0641|consen  192 WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHP  271 (350)
T ss_pred             ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCC
Confidence                     4689999999999888877643  2     35789999999999999999999999999999999988776


Q ss_pred             CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       219 ~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +..  .+.++.|+|...||++|+.|..|++-|++..    -++-....|.+.+-.+.|+|..--|+|.|.|++..+|..
T Consensus       272 hsa--dir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~  348 (350)
T KOG0641|consen  272 HSA--DIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL  348 (350)
T ss_pred             Ccc--ceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence            654  4688999999999999999999999987532    123334579998889999999888999999999999975

>KOG0274|consensus

Probab=99.96  E-value=8.2e-28  Score=217.41  Aligned_cols=257  Identities=24%  Similarity=0.432  Sum_probs=213.5

Q ss_pred             CeEeecccceeEEE-EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHS-VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~-~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |++||..+...+.. +..|...|++++|...+..|++|+.|.++++||..    +..+...+.+|.+.+.|+...  +..
T Consensus       230 l~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~----sg~C~~~l~gh~stv~~~~~~--~~~  303 (537)
T KOG0274|consen  230 LHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCS----TGECTHSLQGHTSSVRCLTID--PFL  303 (537)
T ss_pred             eEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecC----CCcEEEEecCCCceEEEEEcc--Cce
Confidence            46899999998877 88999999999999888899999999999999964    445667788999999998763  457


Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc----
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT----  155 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~----  155 (320)
                      +++|+.|.+|++|++++++.+..+.+|.++|.++.+.    +..+++|+.|+.|++||+.+++++.++.+|...+.    
T Consensus       304 ~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~----~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~  379 (537)
T KOG0274|consen  304 LVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD----EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIV  379 (537)
T ss_pred             EeeccCCceEEEEeccCcceEEEeccccccEEEEEec----CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEe
Confidence            8888999999999999999999999999999998764    57999999999999999999999999999876542    


Q ss_pred             ----------CCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceee
Q psy14961        156 ----------DDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFG  224 (320)
Q Consensus       156 ----------~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~  224 (320)
                                -|+.|++||+++. +|+.++.+|..-+.++.+.  ++.|++++.|++|++||..+++.+...... ....
T Consensus       380 ~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~--~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-~~~~  456 (537)
T KOG0274|consen  380 DSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLR--DNFLVSSSADGTIKLWDAEEGECLRTLEGR-HVGG  456 (537)
T ss_pred             cCcceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccc--cceeEeccccccEEEeecccCceeeeeccC-Cccc
Confidence                      3788999999999 9999999999998666655  679999999999999999998887666553 2223


Q ss_pred             eEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeEEEE
Q psy14961        225 ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQV  272 (320)
Q Consensus       225 ~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~  272 (320)
                      +..+.+.  ...+++++.+|.+.+||+.++.....+..+.. .+..+++
T Consensus       457 v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~~~~~~~~~~  503 (537)
T KOG0274|consen  457 VSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTDLGATWGVAP  503 (537)
T ss_pred             EEEeecC--cceEEEEecCCeeEEEecccCchhhhhhhccccccccccc
Confidence            3444433  47888999999999999999888777655443 3444443

>KOG0299|consensus

Probab=99.96  E-value=1.5e-27  Score=200.81  Aligned_cols=273  Identities=20%  Similarity=0.303  Sum_probs=213.0

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCc-------------ccccccc-cccccCeEEEEecCCCCE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS-------------SAKKKTV-ATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-------------~~~~~~~-~~h~~~v~~~~~~~~~~~   79 (320)
                      .+..|...+.+|+++|+++++++++.+++|.-|++......             ......- ..|...+.+++.++++.+
T Consensus       137 ~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky  216 (479)
T KOG0299|consen  137 VIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY  216 (479)
T ss_pred             eeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence            34568889999999999999999999999999987543211             0000111 267888999999999999


Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-----
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-----  154 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-----  154 (320)
                      |++|+.|..|.||+.++.+.++.+.+|.+.|.+++|--.  .+.+++++.|+.+++|++.....+.++-+|+..+     
T Consensus       217 latgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~g--t~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Ida  294 (479)
T KOG0299|consen  217 LATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKG--TSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDA  294 (479)
T ss_pred             EEecCCCceEEEecCcccchhhcccccccceeeeeeecC--ccceeeeecCCceEEEehhHhHHHHHHhCCccceeeech
Confidence            999999999999999999999999999999999988543  4589999999999999998766666666666443     


Q ss_pred             ----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc---
Q psy14961        155 ----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI---  221 (320)
Q Consensus       155 ----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---  221 (320)
                                ..|.++++|++.. .....+.+|...+.|++|-.+ ..|++||.||.|.+|++...+++........   
T Consensus       295 L~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~  372 (479)
T KOG0299|consen  295 LSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIP  372 (479)
T ss_pred             hcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccC
Confidence                      2588999999943 333456788889999999854 6799999999999999988888766542111   


Q ss_pred             -------eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE----EEEeecCCCceeEEEECcCCCeE-EEecCCCceE
Q psy14961        222 -------LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR----VNHLMGHENRVSCLQVSPDGTAF-SSGSWDTTLR  289 (320)
Q Consensus       222 -------~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~----~~~~~~h~~~i~~i~~s~~~~~l-~s~s~D~~ir  289 (320)
                             .+.+++++..|...++++|+.+|.|++|.+..+.+    +..+ .-.+.|++|+|+++|+.+ |..+..-.+-
T Consensus       373 ~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~l-s~~GfVNsl~f~~sgk~ivagiGkEhRlG  451 (479)
T KOG0299|consen  373 ELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSL-SLVGFVNSLAFSNSGKRIVAGIGKEHRLG  451 (479)
T ss_pred             CccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeec-ccccEEEEEEEccCCCEEEEecccccccc
Confidence                   12578899999999999999999999998776532    3332 357899999999999954 4445444443


Q ss_pred             ee
Q psy14961        290 DE  291 (320)
Q Consensus       290 ~~  291 (320)
                      -|
T Consensus       452 RW  453 (479)
T KOG0299|consen  452 RW  453 (479)
T ss_pred             ee
Confidence            33

>KOG0282|consensus

Probab=99.96  E-value=7.9e-29  Score=209.62  Aligned_cols=236  Identities=23%  Similarity=0.415  Sum_probs=197.9

Q ss_pred             ccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCC-cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEE
Q psy14961         57 KKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVES-SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVN  134 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~  134 (320)
                      ....+.+|...|+++.|.+ .+-+|++++.|+.|+||++.. ++++++|.+|..+|..+.|  +.+|..|+|++-|+.|+
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~--s~~g~~fLS~sfD~~lK  283 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASF--NNCGTSFLSASFDRFLK  283 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhc--cccCCeeeeeecceeee
Confidence            3456789999999999876 777899999999999999866 8899999999999998877  55789999999999999


Q ss_pred             EEeCCCCcEEEEeccCCc-------------c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        135 IWDMRTGYCVQSFEGHHN-------------L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       135 lwd~~~~~~~~~~~~~~~-------------~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                      +||.++|+++..+.....             +  ...|+.|+.||+|+++.+++...|-..|..+.|-|+|.++++.+.|
T Consensus       284 lwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDd  363 (503)
T KOG0282|consen  284 LWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDD  363 (503)
T ss_pred             eeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccC
Confidence            999999999887643221             1  1468899999999999999999999999999999999999999999


Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE---EEEeecCC--CceeEEEECc
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR---VNHLMGHE--NRVSCLQVSP  274 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~---~~~~~~h~--~~i~~i~~s~  274 (320)
                      ++++||+.+.+-.+...... ......++..+|++.++++-+.|+.|.+|.+....+   ...+.+|.  +--..+.|||
T Consensus       364 ks~riWe~~~~v~ik~i~~~-~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp  442 (503)
T KOG0282|consen  364 KSVRIWENRIPVPIKNIADP-EMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP  442 (503)
T ss_pred             ccEEEEEcCCCccchhhcch-hhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcC
Confidence            99999999877655433222 223456788999999999999999999998654333   34578885  3457889999


Q ss_pred             CCCeEEEecCCCceEeeecch
Q psy14961        275 DGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       275 ~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ||.+|+||+.||.+.+|+.+.
T Consensus       443 DG~~l~SGdsdG~v~~wdwkt  463 (503)
T KOG0282|consen  443 DGRTLCSGDSDGKVNFWDWKT  463 (503)
T ss_pred             CCCeEEeecCCccEEEeechh
Confidence            999999999999999999643

>KOG0310|consensus

Probab=99.96  E-value=7.3e-27  Score=198.00  Aligned_cols=263  Identities=21%  Similarity=0.342  Sum_probs=210.2

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      .+.|.+++|+|...+=++....-.+.+|+...    ....+.+......++++.|-.||..+++|+..|.|++||..+..
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~----~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~  101 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVT----RSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRV  101 (487)
T ss_pred             cCcceeEecCCCCCCceEEecccEEEEEecch----hhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHH
Confidence            46899999999665433333346789997532    22333455566889999999999999999999999999987777


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----------------cCCCeEEE
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI----------------TDDKLVNI  162 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~----------------~~d~~i~i  162 (320)
                      .+..+++|..++..+.|+|. ++..|++|+.|+.+++||+.+......+.+|...+                +.|+.|++
T Consensus       102 iLR~~~ah~apv~~~~f~~~-d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl  180 (487)
T KOG0310|consen  102 ILRQLYAHQAPVHVTKFSPQ-DNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRL  180 (487)
T ss_pred             HHHHHhhccCceeEEEeccc-CCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEE
Confidence            88899999999999999876 45788899999999999999988766777776543                46999999


Q ss_pred             EECcCC-eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe-EEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        163 WDMRTG-YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA-CYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       163 wd~~~~-~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                      ||++.. ..+.++ .|..+|.++.+-|.|..+|+++. ..+++||+-++.... ....+.  -.++++.+..+++.|++|
T Consensus       181 ~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~--KtVTcL~l~s~~~rLlS~  256 (487)
T KOG0310|consen  181 WDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHN--KTVTCLRLASDSTRLLSG  256 (487)
T ss_pred             EEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhccc--ceEEEEEeecCCceEeec
Confidence            999987 444444 59999999999999999999885 479999998655432 222122  246889999999999999


Q ss_pred             eCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961        241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       241 ~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      +-|+.|++||+.+.+.+.. ....++|.+|+.+||++.++.|-.||.+-+-
T Consensus       257 sLD~~VKVfd~t~~Kvv~s-~~~~~pvLsiavs~dd~t~viGmsnGlv~~r  306 (487)
T KOG0310|consen  257 SLDRHVKVFDTTNYKVVHS-WKYPGPVLSIAVSPDDQTVVIGMSNGLVSIR  306 (487)
T ss_pred             ccccceEEEEccceEEEEe-eecccceeeEEecCCCceEEEecccceeeee
Confidence            9999999999776655544 5578999999999999999999999987655

>KOG0308|consensus

Probab=99.96  E-value=8.1e-28  Score=210.05  Aligned_cols=251  Identities=21%  Similarity=0.379  Sum_probs=205.9

Q ss_pred             EEEEc-CCCCEEEEecCCCeEEEEEecccCCc--ccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc--c
Q psy14961         24 ACAYA-PSGSVVASGGLDNKVTVYAIALEDDS--SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS--Q   98 (320)
Q Consensus        24 ~~~~~-~~~~~l~s~~~dg~i~v~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~   98 (320)
                      ++..+ |.+++|+|||+||.|++|++.-....  ......+..|...|..+....+++.+++++.|-+|++|+....  -
T Consensus        29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~  108 (735)
T KOG0308|consen   29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF  108 (735)
T ss_pred             hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence            55555 57778999999999999998532211  1224567789888888877778889999999999999999776  5


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE--EEEeccCCccccCCCeEEEEECcCCeeeeeec-
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC--VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE-  175 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-  175 (320)
                      +...+..|..-|.|++.. .++..++++|+-|+.|.+||++++..  +.+++    .               .....+. 
T Consensus       109 c~stir~H~DYVkcla~~-ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n----~---------------~t~~sl~s  168 (735)
T KOG0308|consen  109 CMSTIRTHKDYVKCLAYI-AKNNELVASGGLDRKIFLWDINTGTATLVASFN----N---------------VTVNSLGS  168 (735)
T ss_pred             hHhhhhcccchheeeeec-ccCceeEEecCCCccEEEEEccCcchhhhhhcc----c---------------cccccCCC
Confidence            667788899999998874 34567999999999999999998732  22211    0               0111222 


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      |+...|.+++.++.|..+++|+..+.+++||.++.+.+.....+..  .+..+..++||+.++++++||+|++||+...+
T Consensus       169 G~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTd--NVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQr  246 (735)
T KOG0308|consen  169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTD--NVRVLLVNDDGTRLLSASSDGTIRLWDLGQQR  246 (735)
T ss_pred             CCccceeeeecCCcceEEEecCcccceEEeccccccceeeeecccc--ceEEEEEcCCCCeEeecCCCceEEeeeccccc
Confidence            7889999999999999999999999999999999888776665543  24678889999999999999999999999999


Q ss_pred             EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        256 RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .+.++..|++.|+++..+|+=+.+.+|+.|+.|..-+..++
T Consensus       247 Cl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~  287 (735)
T KOG0308|consen  247 CLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP  287 (735)
T ss_pred             eeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence            99999999999999999999999999999999998888775

>KOG0278|consensus

Probab=99.96  E-value=3.4e-28  Score=190.20  Aligned_cols=242  Identities=24%  Similarity=0.348  Sum_probs=199.4

Q ss_pred             eecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE
Q psy14961          4 WDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG   83 (320)
Q Consensus         4 W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~   83 (320)
                      -+..|+.-+..+..|...|+++.+..+...-|+++.|-+-++||.-..+    ... ...|...|..++|+.+.++|++|
T Consensus        44 r~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgd----elh-sf~hkhivk~~af~~ds~~lltg  118 (334)
T KOG0278|consen   44 RNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGD----ELH-SFEHKHIVKAVAFSQDSNYLLTG  118 (334)
T ss_pred             ccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhh----hhh-hhhhhheeeeEEecccchhhhcc
Confidence            3456677788888999999999999999999999999999999864322    122 34688999999999999999999


Q ss_pred             eCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc----------
Q psy14961         84 SGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN----------  152 (320)
Q Consensus        84 ~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~----------  152 (320)
                      +.+..+||||++.. .+...+.+|.+.|..+.|+-.  .+.++|++.|+.||+||.+++..++++.-...          
T Consensus       119 g~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~e--D~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG  196 (334)
T KOG0278|consen  119 GQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHE--DKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDG  196 (334)
T ss_pred             chHHHhhhhhccCCCCCchhhcCCCCcceeEEEecc--CceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCC
Confidence            99999999999765 456778899999999888753  46888889999999999999988877643222          


Q ss_pred             ---cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE-ecCcceeeeEEE
Q psy14961        153 ---LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY-KKDSILFGATSV  228 (320)
Q Consensus       153 ---~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~  228 (320)
                         .+...+.|++||..+...+...+ -...|.+.+++|+...+++|++|..++.||..+++.+..+ +.+  ...+.++
T Consensus       197 ~ilTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh--~gpVhcV  273 (334)
T KOG0278|consen  197 RILTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGH--FGPVHCV  273 (334)
T ss_pred             CEEEEecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCC--CCceEEE
Confidence               23456789999998877776654 2456899999999999999999999999999999988776 222  2346789


Q ss_pred             EEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        229 DFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      .|+|+|...|+|++||+|++|.+..++
T Consensus       274 rFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  274 RFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             EECCCCceeeccCCCceEEEEEecCCC
Confidence            999999999999999999999876543

>KOG0301|consensus

Probab=99.96  E-value=3.5e-26  Score=201.20  Aligned_cols=268  Identities=22%  Similarity=0.353  Sum_probs=205.7

Q ss_pred             eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEE-EEecC-CCCEEEEEeCCC
Q psy14961         10 TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISC-CIFPN-SDQQILTGSGDC   87 (320)
Q Consensus        10 ~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~-~~~~l~s~~~dg   87 (320)
                      +..+.+..|..-|.++++-+.. .++++|+||++++|+--..  ..-....+.+|.+.+.+ +.|.+ +...+++|+.|.
T Consensus         5 ~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~--~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~   81 (745)
T KOG0301|consen    5 KLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGK--QYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT   81 (745)
T ss_pred             eeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCc--ccccceecccCcceeeccceeccccCcceEeecccc
Confidence            4455667788888888766554 8999999999999975321  11122345567777766 66653 455699999999


Q ss_pred             eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-------------
Q psy14961         88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------------  154 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------------  154 (320)
                      ++.+|.+.+..++..+++|+..|.+++.  ..++ .++|||+|.++++|-.  +++...+++|...+             
T Consensus        82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~--~~~~-~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~~~vT  156 (745)
T KOG0301|consen   82 TIIVFKLSQAEPLYTLKGHKSNVCSLSI--GEDG-TLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPENTYVT  156 (745)
T ss_pred             eEEEEecCCCCchhhhhccccceeeeec--CCcC-ceEecccccceEEecc--hhhhcccCCcchheeeeeecCCCcEEe
Confidence            9999999999999999999999987764  3344 4999999999999975  45555566665432             


Q ss_pred             -cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        155 -TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       155 -~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                       +.|+.|++|.-  ++++.+|.+|.+-|+.+++-|++ .|+||+.||.|++|++. ++.+..+..+...  +.+++..++
T Consensus       157 gsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~-ge~l~~~~ghtn~--vYsis~~~~  230 (745)
T KOG0301|consen  157 GSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLD-GEVLLEMHGHTNF--VYSISMALS  230 (745)
T ss_pred             ccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEecc-CceeeeeeccceE--EEEEEecCC
Confidence             47999999965  77889999999999999999875 58899999999999994 5555555444433  345666778


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +..++++++|++++||+..  .....+.-..-.|+++.+-++|. +++|+.||.||+|...
T Consensus       231 ~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  231 DGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD  288 (745)
T ss_pred             CCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence            8899999999999999865  33333333344899999999987 6889999999999853

>KOG0973|consensus

Probab=99.95  E-value=7e-26  Score=208.47  Aligned_cols=271  Identities=20%  Similarity=0.334  Sum_probs=206.5

Q ss_pred             ccceEEEEEcCCCCEEEEec--CCCeEEEEEeccc-------CC-cccccccccccccCeEEEEecCCCCEEEEEeCCCe
Q psy14961         19 ATWVMACAYAPSGSVVASGG--LDNKVTVYAIALE-------DD-SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT   88 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~--~dg~i~v~~~~~~-------~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~   88 (320)
                      +..|.++..+|+|..++|||  .|+.+.+|..+.-       .. -.....+...|.+.|.|+.|+++|++|++|++|+.
T Consensus        13 ~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~   92 (942)
T KOG0973|consen   13 EKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRL   92 (942)
T ss_pred             CeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcce
Confidence            34588999999999999999  8999999986421       01 12233455679999999999999999999999999


Q ss_pred             EEEEECCC-------c-----------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC
Q psy14961         89 CALWDVES-------S-----------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH  150 (320)
Q Consensus        89 v~iwd~~~-------~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~  150 (320)
                      |.||....       +           +.+..+.+|...|..++|.|  ++.+|++++.|++|.+||..+...+..+.+|
T Consensus        93 v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp--~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H  170 (942)
T KOG0973|consen   93 VMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP--DDSLLVSVSLDNSVIIWNAKTFELLKVLRGH  170 (942)
T ss_pred             EEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC--CccEEEEecccceEEEEccccceeeeeeecc
Confidence            99998762       1           24567889999999998865  6889999999999999999999888889888


Q ss_pred             Cccc---------------cCCCeEEEEECcCCeeeeeecCCC------CCeEEEEEcCCCCEEEEeeC----CCeEEEE
Q psy14961        151 HNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQ------SDVNSVKFHPSGDAVATGSD----DATCRLF  205 (320)
Q Consensus       151 ~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~------~~v~~v~~~p~g~~l~s~s~----dg~i~iw  205 (320)
                      ...+               ++|+++++|++.+-.....+..+-      .-...+.|+|||++|++...    -.++.|.
T Consensus       171 ~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Ii  250 (942)
T KOG0973|consen  171 QSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAII  250 (942)
T ss_pred             cccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEE
Confidence            7654               479999999976655555544432      23678999999999998753    2356676


Q ss_pred             ECCCCeeEeEEecCcceeeeEEEEEecC-------------Cc----EEEEEeCCCeEEEEcCCCCeEEEEeec-CCCce
Q psy14961        206 DLRADKEVACYKKDSILFGATSVDFSVS-------------GR----LLFAGYNDYTINVWDSLKCCRVNHLMG-HENRV  267 (320)
Q Consensus       206 d~~~~~~~~~~~~~~~~~~~~~~~~s~~-------------~~----~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~i  267 (320)
                      +=.+-+.-..+-.|..  ++..++|+|.             ..    .+|+|+.|++|.+|.....+++..... -...|
T Consensus       251 eR~tWk~~~~LvGH~~--p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI  328 (942)
T KOG0973|consen  251 ERGTWKVDKDLVGHSA--PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSI  328 (942)
T ss_pred             ecCCceeeeeeecCCC--ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCce
Confidence            5433332222222222  3567788761             11    678999999999999887777733221 24689


Q ss_pred             eEEEECcCCCeEEEecCCCceEeeec
Q psy14961        268 SCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       268 ~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ..++|+|||..|+.+|.||+|.+...
T Consensus       329 ~DmsWspdG~~LfacS~DGtV~~i~F  354 (942)
T KOG0973|consen  329 VDMSWSPDGFSLFACSLDGTVALIHF  354 (942)
T ss_pred             eeeeEcCCCCeEEEEecCCeEEEEEc
Confidence            99999999999999999999997664

>KOG1408|consensus

Probab=99.95  E-value=1.5e-26  Score=204.25  Aligned_cols=293  Identities=18%  Similarity=0.264  Sum_probs=214.9

Q ss_pred             CeEeecccceeEE---EEEeCccceEEEEEcC-----------CCCEEEEecCCCeEEEEEecccCCccc---------c
Q psy14961          1 MIIWDGLTQTKEH---SVTMPATWVMACAYAP-----------SGSVVASGGLDNKVTVYAIALEDDSSA---------K   57 (320)
Q Consensus         1 ~~~W~~~~~~~~~---~~~~~~~~V~~~~~~~-----------~~~~l~s~~~dg~i~v~~~~~~~~~~~---------~   57 (320)
                      |+|||+..-.+..   ....|..-|+.+.--|           -..-+.|++.|++|++|+++.-.....         .
T Consensus       348 lYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l  427 (1080)
T KOG1408|consen  348 LYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANL  427 (1080)
T ss_pred             EEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhh
Confidence            5789877655433   3344555555544333           112478999999999999864110000         0


Q ss_pred             cc------------------------cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEE
Q psy14961         58 KK------------------------TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDL  113 (320)
Q Consensus        58 ~~------------------------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  113 (320)
                      .+                        ......-.+.+++.+|++++|++|.+-|++++|++...+....+.+|.++|.|+
T Consensus       428 ~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcL  507 (1080)
T KOG1408|consen  428 SKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCL  507 (1080)
T ss_pred             hcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEE
Confidence            00                        001123457889999999999999999999999999888888889999999999


Q ss_pred             EEeeC-CCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCcccc------CCCeEEEE----------ECcC-Ceeeeee
Q psy14961        114 DLAPS-ETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHNLIT------DDKLVNIW----------DMRT-GYCVQSF  174 (320)
Q Consensus       114 ~~~~~-~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~~~~------~d~~i~iw----------d~~~-~~~~~~~  174 (320)
                      .++.. -..++|++++.|+.|+++|..... .+.++.+|...++      .+...++.          +... ..-...+
T Consensus       508 eyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f  587 (1080)
T KOG1408|consen  508 EYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLF  587 (1080)
T ss_pred             eecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceec
Confidence            88632 233688999999999999986554 4456666654432      22222221          1111 0001112


Q ss_pred             cCC-----CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-eeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961        175 EGH-----QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-FGATSVDFSVSGRLLFAGYNDYTINV  248 (320)
Q Consensus       175 ~~~-----~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~v~~  248 (320)
                      ..|     ...+..++..|+.+++++++.|..|+|||+..++....|+..... .....+...|.|-|||+.+.|.++.+
T Consensus       588 ~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~  667 (1080)
T KOG1408|consen  588 PRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCF  667 (1080)
T ss_pred             cccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEE
Confidence            222     235788999999999999999999999999999988887654332 23456778999999999999999999


Q ss_pred             EcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        249 WDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       249 wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +|..+++.+.+..||...|+.+.|.+|.+.|+|.+.||.|-+|..
T Consensus       668 ~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  668 VDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKL  712 (1080)
T ss_pred             EEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEEC
Confidence            999999999999999999999999999999999999999999994

>KOG1446|consensus

Probab=99.95  E-value=3.8e-25  Score=178.61  Aligned_cols=230  Identities=20%  Similarity=0.259  Sum_probs=187.7

Q ss_pred             ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCC
Q psy14961         63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRT  140 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~  140 (320)
                      .....|.++.|+.+|+.+++++.|.++++||..++..+..+..++-.+..++|.-.+  +.++.++.  |..||..++.+
T Consensus        12 ~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~--~~~i~sStk~d~tIryLsl~d   89 (311)
T KOG1446|consen   12 ETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHS--NTVIHSSTKEDDTIRYLSLHD   89 (311)
T ss_pred             cCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCC--ceEEEccCCCCCceEEEEeec
Confidence            345789999999999999999999999999999999998888777777777776443  45665555  88999999999


Q ss_pred             CcEEEEeccCCcccc---------------CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEE
Q psy14961        141 GYCVQSFEGHHNLIT---------------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF  205 (320)
Q Consensus       141 ~~~~~~~~~~~~~~~---------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iw  205 (320)
                      .+.++-|.||...+.               .|++|++||+|..+|...+.....+  .++|+|+|-++|++...+.|++|
T Consensus        90 NkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLy  167 (311)
T KOG1446|consen   90 NKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLY  167 (311)
T ss_pred             CceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCCeEEEE
Confidence            999999999987653               4889999999988777666544444  48999999999999988899999


Q ss_pred             ECCCC--eeEeEEecC-cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce---eEEEECcCCCeE
Q psy14961        206 DLRAD--KEVACYKKD-SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV---SCLQVSPDGTAF  279 (320)
Q Consensus       206 d~~~~--~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i---~~i~~s~~~~~l  279 (320)
                      |++.-  .+-..+... ........+.|||||++|+.+++.+.+.+.|..++....++.+|...-   -..+|+||++.+
T Consensus       168 D~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fv  247 (311)
T KOG1446|consen  168 DLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFV  247 (311)
T ss_pred             EecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEE
Confidence            99853  222223222 223345789999999999999999999999999999998888775432   678999999999


Q ss_pred             EEecCCCceEeeecchH
Q psy14961        280 SSGSWDTTLRDEESKNR  296 (320)
Q Consensus       280 ~s~s~D~~ir~~~~~~~  296 (320)
                      ++|+.||+|.+|+.+.-
T Consensus       248 l~gs~dg~i~vw~~~tg  264 (311)
T KOG1446|consen  248 LSGSDDGTIHVWNLETG  264 (311)
T ss_pred             EEecCCCcEEEEEcCCC
Confidence            99999999999997443

>KOG0288|consensus

Probab=99.95  E-value=3.1e-27  Score=196.47  Aligned_cols=240  Identities=21%  Similarity=0.342  Sum_probs=192.2

Q ss_pred             CeEeecccce--eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQT--KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~--~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |++|+..-.+  .+..+......|+++.|.++++++++++.|+.+++|+++    ......++.+|...|+++.|.....
T Consensus       199 Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd----~~r~~~TLsGHtdkVt~ak~~~~~~  274 (459)
T KOG0288|consen  199 IKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVD----SLRLRHTLSGHTDKVTAAKFKLSHS  274 (459)
T ss_pred             hhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeecc----chhhhhhhcccccceeeehhhcccc
Confidence            5689877665  444555666789999999999999999999999999985    3455678899999999999976666


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc-----
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-----  153 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~-----  153 (320)
                      .+++|+.|++|++||+....+...+. ..+.+..+...    +..++||..|+.|+.||++++.+..+.+.+..+     
T Consensus       275 ~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~----~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~l  349 (459)
T KOG0288|consen  275 RVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS----ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDL  349 (459)
T ss_pred             ceeeccccchhhhhhhhhhheecccc-ccccccceEec----ceeeeecccccceEEEeccCCceeeEeecCcceeeEee
Confidence            69999999999999999877766544 24445555432    357899999999999999988877665544322     


Q ss_pred             ---------ccCCCeEEEEECcCCeeeeeecCC----CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc
Q psy14961        154 ---------ITDDKLVNIWDMRTGYCVQSFEGH----QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS  220 (320)
Q Consensus       154 ---------~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~  220 (320)
                               .+.|..+++.|+++......+...    ....+.+.|||++.|+++||.||.|+||++.+++.........
T Consensus       350 s~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~  429 (459)
T KOG0288|consen  350 SMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLST  429 (459)
T ss_pred             ccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCC
Confidence                     135788999999987766555331    2358899999999999999999999999999988776665544


Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVW  249 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~w  249 (320)
                      ....+.+++|+|.|..|++++.++.+.+|
T Consensus       430 s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  430 SNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             CCcceEEEEEcCCCchhhcccCCcceEec
Confidence            44468899999999999999999999999

>KOG2096|consensus

Probab=99.95  E-value=9.3e-26  Score=182.25  Aligned_cols=273  Identities=18%  Similarity=0.239  Sum_probs=189.2

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE-EEEeCCCeEEEEE
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI-LTGSGDCTCALWD   93 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd   93 (320)
                      +..|...|++++|+.||++|+|++.|+.|++|++..-....-........-+.-+.+.|.++..-+ ++.-+..++++|.
T Consensus        82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk  161 (420)
T KOG2096|consen   82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYK  161 (420)
T ss_pred             hhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEE
Confidence            456778999999999999999999999999999842111110000000111234678898887654 4455667899997


Q ss_pred             CCCc---ceee---------ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc-----CCccccC
Q psy14961         94 VESS---QLLQ---------SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG-----HHNLITD  156 (320)
Q Consensus        94 ~~~~---~~~~---------~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~-----~~~~~~~  156 (320)
                      +...   ....         .-+.|.-.+..+.+  ..++.++++++.|..|.+|+++ |+.+.+++.     +...+++
T Consensus       162 ~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGi--A~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP  238 (420)
T KOG2096|consen  162 LVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGI--AGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSP  238 (420)
T ss_pred             eeecccCCCCcccccccccccchhcccceEEEee--cCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCC
Confidence            6432   1110         11234444544444  4467899999999999999999 888777643     3334455


Q ss_pred             CC----------eEEEEECc---CC-----eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee------
Q psy14961        157 DK----------LVNIWDMR---TG-----YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE------  212 (320)
Q Consensus       157 d~----------~i~iwd~~---~~-----~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~------  212 (320)
                      +|          -|++|.+-   .|     ..+.+++||+..|..++|+|+...++++|.||++++||.+-...      
T Consensus       239 ~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk  318 (420)
T KOG2096|consen  239 DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPK  318 (420)
T ss_pred             CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCch
Confidence            44          37888752   22     24567899999999999999999999999999999999753211      


Q ss_pred             -EeEEe--cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-cCCCceeEEEECcCCCeEEEecCCCce
Q psy14961        213 -VACYK--KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTL  288 (320)
Q Consensus       213 -~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~i  288 (320)
                       +...+  .+........++.+|.|..||.+. ..++++|..+++..+-++. .|+..|++|+|+|+|++++|+| |+.+
T Consensus       319 ~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~v  396 (420)
T KOG2096|consen  319 ILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYV  396 (420)
T ss_pred             HhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceee
Confidence             11111  011111234788999999998876 4479999888877666554 6999999999999999999997 4777


Q ss_pred             Eeee
Q psy14961        289 RDEE  292 (320)
Q Consensus       289 r~~~  292 (320)
                      |+..
T Consensus       397 rv~~  400 (420)
T KOG2096|consen  397 RVIR  400 (420)
T ss_pred             eeec
Confidence            7655

>KOG0300|consensus

Probab=99.95  E-value=1.8e-26  Score=186.45  Aligned_cols=261  Identities=25%  Similarity=0.380  Sum_probs=209.1

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEeccc----C-----------C-----------c-
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE----D-----------D-----------S-   54 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~----~-----------~-----------~-   54 (320)
                      .||.++.++++..+..|...|+++.|++.+.++++++.|++..||....+    .           +           . 
T Consensus       173 ~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~  252 (481)
T KOG0300|consen  173 RIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDS  252 (481)
T ss_pred             eEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccccc
Confidence            48999999999999999999999999999999999999999999972110    0           0           0 


Q ss_pred             ---------ccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE
Q psy14961         55 ---------SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV  125 (320)
Q Consensus        55 ---------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~  125 (320)
                               ......+.+|.+.|.++.|...++.+++++.|++..+||++++.++..+.+|..+..-++.+|  ...+++
T Consensus       253 ~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHp--tQrLVv  330 (481)
T KOG0300|consen  253 SEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHP--TQRLVV  330 (481)
T ss_pred             ccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCC--cceEEE
Confidence                     001234567999999999999999999999999999999999999999999999887665544  567899


Q ss_pred             EEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEE
Q psy14961        126 SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF  205 (320)
Q Consensus       126 s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iw  205 (320)
                      +++.|.++++||.+...                          ..+..|.||...|+++.|.-+ ..+++|+.|.+|++|
T Consensus       331 TsSrDtTFRLWDFReaI--------------------------~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvW  383 (481)
T KOG0300|consen  331 TSSRDTTFRLWDFREAI--------------------------QSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVW  383 (481)
T ss_pred             EeccCceeEeccchhhc--------------------------ceeeeecccccceeEEEEecC-CceeecCCCceEEEe
Confidence            99999999999987321                          124457889999999999975 569999999999999


Q ss_pred             ECCCCe-eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE----EEeecCCCceeEEEECcCCC--e
Q psy14961        206 DLRADK-EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV----NHLMGHENRVSCLQVSPDGT--A  278 (320)
Q Consensus       206 d~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~----~~~~~h~~~i~~i~~s~~~~--~  278 (320)
                      |++.-+ ++..+..+.   .+..++++..++.+|.--.+..|++||+...+..    ..-.+|.--|+|.+|..+-.  -
T Consensus       384 dLrNMRsplATIRtdS---~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cn  460 (481)
T KOG0300|consen  384 DLRNMRSPLATIRTDS---PANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACN  460 (481)
T ss_pred             eeccccCcceeeecCC---ccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccc
Confidence            998644 333333332   2467788888889999988999999997643221    22357888999999997644  3


Q ss_pred             EEEecCCCceEeeecc
Q psy14961        279 FSSGSWDTTLRDEESK  294 (320)
Q Consensus       279 l~s~s~D~~ir~~~~~  294 (320)
                      |+++|.|+.+--|..-
T Consensus       461 LftcGFDR~v~gW~in  476 (481)
T KOG0300|consen  461 LFTCGFDRMVAGWKIN  476 (481)
T ss_pred             cccccccceeeeeEec
Confidence            8999999999999863

>KOG1332|consensus

Probab=99.95  E-value=1.3e-26  Score=180.65  Aligned_cols=249  Identities=16%  Similarity=0.194  Sum_probs=192.9

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCCEEEEEeCCCeEEEEEC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd~   94 (320)
                      .|++.|.....+--|++|+|+++|++|+|+.+..... .....++.+|.++|..+.|..  -|.+|++++.||.|.||.-
T Consensus         9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~-s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen    9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ-SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC-ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence            5778888888899999999999999999999865432 245668899999999999944  6889999999999999998


Q ss_pred             CCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeee
Q psy14961         95 ESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQ  172 (320)
Q Consensus        95 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~  172 (320)
                      ++++-  ......|.+.|.+++++|+.-|-.|++++.||.|.+.+.+..-                   .|+.     ..
T Consensus        88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g-------------------~w~t-----~k  143 (299)
T KOG1332|consen   88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSG-------------------GWTT-----SK  143 (299)
T ss_pred             CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCC-------------------Cccc-----hh
Confidence            87753  3345679999999999999989999999999999998875420                   0110     11


Q ss_pred             eecCCCCCeEEEEEcCC---C-----------CEEEEeeCCCeEEEEECCCCeeEe--EEecCcceeeeEEEEEecCC--
Q psy14961        173 SFEGHQSDVNSVKFHPS---G-----------DAVATGSDDATCRLFDLRADKEVA--CYKKDSILFGATSVDFSVSG--  234 (320)
Q Consensus       173 ~~~~~~~~v~~v~~~p~---g-----------~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~s~~~--  234 (320)
                      ....|.-.|++++|.|.   |           +.|++|+.|+.|+||+...++=..  .+..+.  --+..+++.|.-  
T Consensus       144 i~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~--dwVRDVAwaP~~gl  221 (299)
T KOG1332|consen  144 IVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHK--DWVRDVAWAPSVGL  221 (299)
T ss_pred             hhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcc--hhhhhhhhccccCC
Confidence            23458888999999986   4           569999999999999988752111  112221  124677787753  


Q ss_pred             --cEEEEEeCCCeEEEEcCCCC--e-EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        235 --RLLFAGYNDYTINVWDSLKC--C-RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       235 --~~l~~g~~dg~v~~wd~~~~--~-~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                        .+||++++||+|.||-....  . ...-+....+.++.+.||+.|+.|+.++.|..+.+|.
T Consensus       222 ~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk  284 (299)
T KOG1332|consen  222 PKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWK  284 (299)
T ss_pred             CceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEE
Confidence              58999999999999954311  1 1122334567899999999999999999999999986

>KOG0268|consensus

Probab=99.95  E-value=3e-27  Score=193.64  Aligned_cols=268  Identities=19%  Similarity=0.290  Sum_probs=201.5

Q ss_pred             eEEEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         11 KEHSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      +...+..|.+.|.+++=+|.. ..+++|+.||.+++||+.    ...+...+..|.+.|..+.+..  ..+++++.|.+|
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnls----qR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtv  131 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLS----QRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTV  131 (433)
T ss_pred             chhhccccccccchhhcCcchhhhhhccccCceEEEEehh----hhhhhheeecccCceeeEEecc--cceEEecCCcce
Confidence            334567788999999999977 789999999999999985    2234567889999999998865  678999999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc-------------c---
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN-------------L---  153 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~-------------~---  153 (320)
                      +.|.++. .++..+.+ ++.+..+..  ...++.+++++++  |.|||.+-..++.+++--..             +   
T Consensus       132 K~wk~~~-~p~~tilg-~s~~~gIdh--~~~~~~FaTcGe~--i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas  205 (433)
T KOG0268|consen  132 KQWKIDG-PPLHTILG-KSVYLGIDH--HRKNSVFATCGEQ--IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILAS  205 (433)
T ss_pred             eeeeccC-Ccceeeec-ccccccccc--ccccccccccCce--eeecccccCCccceeecCCCceeEEecCCCcchheee
Confidence            9999875 35555543 444555543  2345688888764  89999865555544321111             1   


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe-eEeEEecCcceeeeEEEEEec
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK-EVACYKKDSILFGATSVDFSV  232 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~  232 (320)
                      ...|+.|.+||++++.++..+. -...-+.|+|+|.+..|++|++|..+..+|++.-. ++..+..+.  -.+.+++|||
T Consensus       206 ~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhv--sAV~dVdfsp  282 (433)
T KOG0268|consen  206 CASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHV--SAVMDVDFSP  282 (433)
T ss_pred             eccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccc--eeEEEeccCC
Confidence            1368999999999998876653 23456789999988889999999999999987543 344444433  2467899999


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        233 SGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .|+-+++|+.|.+|+||....+...... ..--..|.|+.||.|.++++|||.|+.||+|..
T Consensus       283 tG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka  344 (433)
T KOG0268|consen  283 TGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA  344 (433)
T ss_pred             CcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence            9999999999999999987654222111 111246899999999999999999999999985

>KOG0269|consensus

Probab=99.95  E-value=8.4e-27  Score=207.32  Aligned_cols=240  Identities=18%  Similarity=0.325  Sum_probs=192.7

Q ss_pred             EEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCcceeee
Q psy14961         25 CAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        25 ~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~  102 (320)
                      +.|.. +.++||+++..|.|.+||+.... .......+..|...+.++.|++ ...+|++|+.||+|++||+....-...
T Consensus        93 VkW~~~~~NlIAT~s~nG~i~vWdlnk~~-rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t  171 (839)
T KOG0269|consen   93 VKWGQLYSNLIATCSTNGVISVWDLNKSI-RNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKST  171 (839)
T ss_pred             cccccchhhhheeecCCCcEEEEecCccc-cchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccc
Confidence            44543 66799999999999999997521 1233446788999999999965 457889999999999999998888888


Q ss_pred             cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeE
Q psy14961        103 FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVN  182 (320)
Q Consensus       103 ~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~  182 (320)
                      +.+..+.|..+.|+|.+ ++.|+++...|.+++||++..                          .++...+.+|.++|.
T Consensus       172 ~~~nSESiRDV~fsp~~-~~~F~s~~dsG~lqlWDlRqp--------------------------~r~~~k~~AH~GpV~  224 (839)
T KOG0269|consen  172 FRSNSESIRDVKFSPGY-GNKFASIHDSGYLQLWDLRQP--------------------------DRCEKKLTAHNGPVL  224 (839)
T ss_pred             ccccchhhhceeeccCC-CceEEEecCCceEEEeeccCc--------------------------hhHHHHhhcccCceE
Confidence            88888899999999986 689999999999999999753                          234556778999999


Q ss_pred             EEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe--CCCeEEEEcCCCC-eEEE
Q psy14961        183 SVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY--NDYTINVWDSLKC-CRVN  258 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~--~dg~v~~wd~~~~-~~~~  258 (320)
                      |+.|||++.+||+||+|+.|+|||..+++.-..+.-. ....+..++|-|.-+ .||+++  .|-.|++||+.+. -+..
T Consensus       225 c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~  303 (839)
T KOG0269|consen  225 CLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYA  303 (839)
T ss_pred             EEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccce
Confidence            9999999999999999999999999765432222111 123467899999766 566665  5778999998764 4578


Q ss_pred             EeecCCCceeEEEECc-CCCeEEEecCCCceEeeec
Q psy14961        259 HLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       259 ~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++..|.+.++.|+|.. |...|.++|.|+++.....
T Consensus       304 t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~  339 (839)
T KOG0269|consen  304 TFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLF  339 (839)
T ss_pred             eeeccCccccceeccCCCceeeEeecCccHHHHhhh
Confidence            8999999999999987 6778999999999875443

>KOG0264|consensus

Probab=99.95  E-value=7.2e-26  Score=190.50  Aligned_cols=251  Identities=25%  Similarity=0.326  Sum_probs=191.5

Q ss_pred             EeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCccc------ccccccccccCeEEEEecCC-CCEEEEEeCCC
Q psy14961         16 TMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSA------KKKTVATHTSFISCCIFPNS-DQQILTGSGDC   87 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg   87 (320)
                      ..|+.-|+.+.+-|+.. +||+++..+.+.|||.........      ....+.+|...-..+.|++. ...+++++.|+
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~  200 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH  200 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence            45777888888888654 777788899999999853222111      12256788876667777654 45799999999


Q ss_pred             eEEEEECCCcc-------eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         88 TCALWDVESSQ-------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        88 ~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      +|++||++...       +...+.+|...|..++|++.. ..+|++++.|+.+.|||+|++                   
T Consensus       201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h-~~lF~sv~dd~~L~iwD~R~~-------------------  260 (422)
T KOG0264|consen  201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLH-EDLFGSVGDDGKLMIWDTRSN-------------------  260 (422)
T ss_pred             cEEEEeccccccCCccccceEEeecCCcceehhhccccc-hhhheeecCCCeEEEEEcCCC-------------------
Confidence            99999986532       345678999999999999875 468999999999999998853                   


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee-EeEEecCcceeeeEEEEEecCC-cEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE-VACYKKDSILFGATSVDFSVSG-RLL  237 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~-~~l  237 (320)
                            +.++....++|..+|+|++|+|.+ ..||+||.|++|.+||+|.-.. +..+..+.  -.+..+.|||.. +.|
T Consensus       261 ------~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~--dev~~V~WSPh~etvL  332 (422)
T KOG0264|consen  261 ------TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHE--DEVFQVEWSPHNETVL  332 (422)
T ss_pred             ------CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCC--cceEEEEeCCCCCcee
Confidence                  112334557899999999999965 5679999999999999987543 22233322  235788999965 578


Q ss_pred             EEEeCCCeEEEEcCCCC--------------eEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecc
Q psy14961        238 FAGYNDYTINVWDSLKC--------------CRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESK  294 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~--------------~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~  294 (320)
                      |+++.|+.+.+||+.+-              +++....||.+.|+.+.|+|+.. .++|++.|+.+.+|+..
T Consensus       333 ASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  333 ASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             EecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            88999999999997542              23466679999999999999655 58999999999999964

>KOG1407|consensus

Probab=99.95  E-value=6.7e-26  Score=178.35  Aligned_cols=230  Identities=22%  Similarity=0.363  Sum_probs=190.4

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee--ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ--SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ..+.+|...+.++.|..+|..+++|+.|+++.+|+++..+...  ...+|.+.|-.+++.|.. .+.|++++.|..|++|
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~-~d~~atas~dk~ir~w   92 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH-PDLFATASGDKTIRIW   92 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC-CcceEEecCCceEEEE
Confidence            4567889999999999999999999999999999998775543  346788889888887653 4689999999999999


Q ss_pred             eCCCCcEEEEeccCCc--------------cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961        137 DMRTGYCVQSFEGHHN--------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC  202 (320)
Q Consensus       137 d~~~~~~~~~~~~~~~--------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i  202 (320)
                      |++.+++.........              +...|..|.+.|.++.+.....+ ..-.++.++|+.+++.++.....|+|
T Consensus        93 d~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v  171 (313)
T KOG1407|consen   93 DIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCV  171 (313)
T ss_pred             EeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceE
Confidence            9999998765532211              12356678888888776554433 34568889999888888877778999


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEe
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      .|......+++..+..+..  .+..+.|+|+|+++|+|+.|..+.+||....-.++.+..++=+|..|.||.||+|||||
T Consensus       172 ~ILsypsLkpv~si~AH~s--nCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASa  249 (313)
T KOG1407|consen  172 EILSYPSLKPVQSIKAHPS--NCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASA  249 (313)
T ss_pred             EEEeccccccccccccCCc--ceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeecc
Confidence            9999988888877776654  34789999999999999999999999999888888899999999999999999999999


Q ss_pred             cCCCceEeee
Q psy14961        283 SWDTTLRDEE  292 (320)
Q Consensus       283 s~D~~ir~~~  292 (320)
                      |.|..|-+=+
T Consensus       250 SEDh~IDIA~  259 (313)
T KOG1407|consen  250 SEDHFIDIAE  259 (313)
T ss_pred             CccceEEeEe
Confidence            9999986443

>KOG0283|consensus

Probab=99.95  E-value=4.6e-26  Score=204.76  Aligned_cols=200  Identities=24%  Similarity=0.372  Sum_probs=163.1

Q ss_pred             cccc-ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC--------------------------------c--------
Q psy14961         59 KTVA-THTSFISCCIFPNSDQQILTGSGDCTCALWDVES--------------------------------S--------   97 (320)
Q Consensus        59 ~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~--------------------------------~--------   97 (320)
                      +.+. +|.+.|+++.|+++|++|++||.|+.|+||.+..                                .        
T Consensus       260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~  339 (712)
T KOG0283|consen  260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS  339 (712)
T ss_pred             eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence            3455 8999999999999999999999999999997643                                0        


Q ss_pred             --------------------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         98 --------------------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        98 --------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                                          +++..|.+|.+.|.++.|+-   .++|++++.|.++|||++....|+..|.         
T Consensus       340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK---n~fLLSSSMDKTVRLWh~~~~~CL~~F~---------  407 (712)
T KOG0283|consen  340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK---NNFLLSSSMDKTVRLWHPGRKECLKVFS---------  407 (712)
T ss_pred             ccccCCccccCCCccccccccchhhhhccchhheeccccc---CCeeEeccccccEEeecCCCcceeeEEe---------
Confidence                                12334567889998777743   4799999999999999998777776553         


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                                         |..-|+||+|+| |.++|++|+-||.++||++...+.+........   ++++.|.|||++
T Consensus       408 -------------------HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~l---ITAvcy~PdGk~  465 (712)
T KOG0283|consen  408 -------------------HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDL---ITAVCYSPDGKG  465 (712)
T ss_pred             -------------------cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhh---heeEEeccCCce
Confidence                               888899999999 678999999999999999988776655544432   688999999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEee---------cCCCceeEEEECc-CCCeEEEecCCCceEeeec
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLM---------GHENRVSCLQVSP-DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~---------~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+.|+.+|..++|++...+.+....         .|. .|+++.|.| +...++..|.|..||++|.
T Consensus       466 avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~  531 (712)
T KOG0283|consen  466 AVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDG  531 (712)
T ss_pred             EEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEec
Confidence            9999999999999988766554331         233 799999998 4445677889999999997

>KOG0646|consensus

Probab=99.95  E-value=7.1e-26  Score=191.08  Aligned_cols=249  Identities=21%  Similarity=0.340  Sum_probs=200.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++|...+..+.+....=+..|.+++-+|.|.+|+.|...|.|++|.+.    ++.....+..|-..|+|+.|+.++..|
T Consensus        63 l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWels----sG~LL~v~~aHYQ~ITcL~fs~dgs~i  138 (476)
T KOG0646|consen   63 LHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELS----SGILLNVLSAHYQSITCLKFSDDGSHI  138 (476)
T ss_pred             ccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEec----cccHHHHHHhhccceeEEEEeCCCcEE
Confidence            4688888777776555556889999999999999999999999999985    445566778899999999999999999


Q ss_pred             EEEeCCCeEEEEECC---------CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         81 LTGSGDCTCALWDVE---------SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      ++|+.||.|.+|.+.         +.+++..|..|.-+|.++.+.+......|+++|.|.++++||+-.+..+.++.   
T Consensus       139 iTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~---  215 (476)
T KOG0646|consen  139 ITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT---  215 (476)
T ss_pred             EecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe---
Confidence            999999999999762         23577888999999999887766445689999999999999998876554431   


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe--e--------------EeE
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK--E--------------VAC  215 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~--~--------------~~~  215 (320)
                                               ....+.+++.+|.+..++.|+++|.|.+.++....  .              ...
T Consensus       216 -------------------------fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~  270 (476)
T KOG0646|consen  216 -------------------------FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINV  270 (476)
T ss_pred             -------------------------cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeee
Confidence                                     34468999999999999999999999998874322  1              111


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEE
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s  281 (320)
                      +..+...-.+++++++-||++|++|+.||+|++||..+.+.++++....++|+.+.+.|-.+-.+.
T Consensus       271 ~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l  336 (476)
T KOG0646|consen  271 LVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGIIL  336 (476)
T ss_pred             eccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccccceec
Confidence            111111124788999999999999999999999999998888887767889999999775443333

>KOG2106|consensus

Probab=99.95  E-value=1.2e-24  Score=185.29  Aligned_cols=278  Identities=20%  Similarity=0.359  Sum_probs=203.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCccccccccccc-ccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATH-TSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~   78 (320)
                      |-+||.+++.....+...++.|..+.|+|.+. ++++.+ .+.+..|+....... .....+..+ ...|.|+.|.+++ 
T Consensus       182 lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l~-k~~~~fek~ekk~Vl~v~F~eng-  258 (626)
T KOG2106|consen  182 LSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRGGSLV-KRQGIFEKREKKFVLCVTFLENG-  258 (626)
T ss_pred             cchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeC-CceEEEEEccCCceE-EEeeccccccceEEEEEEEcCCC-
Confidence            34899999999999998999999999999655 555555 588999987543221 111222222 3679999998866 


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE------------
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS------------  146 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~------------  146 (320)
                      .+++|..+|+|.||+..+.+..++..+|.+.|.++++.-  +| .|+||+.|+.|.+||-+-.+ ++.            
T Consensus       259 dviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr--~G-tllSGgKDRki~~Wd~~y~k-~r~~elPe~~G~iRt  334 (626)
T KOG2106|consen  259 DVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLR--DG-TLLSGGKDRKIILWDDNYRK-LRETELPEQFGPIRT  334 (626)
T ss_pred             CEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEec--Cc-cEeecCccceEEeccccccc-cccccCchhcCCeeE
Confidence            689999999999999988888777779999999998754  45 56779999999999932211 111            


Q ss_pred             -eccCCccc--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        147 -FEGHHNLI--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       147 -~~~~~~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                       .+++..+.  +....|..=.+.++. .....+|..+...++.+|+.+.+++++.|+.+++|+  ..+........   .
T Consensus       335 v~e~~~di~vGTtrN~iL~Gt~~~~f-~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~---d  408 (626)
T KOG2106|consen  335 VAEGKGDILVGTTRNFILQGTLENGF-TLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIE---D  408 (626)
T ss_pred             EecCCCcEEEeeccceEEEeeecCCc-eEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEec---C
Confidence             11111110  111112111222222 233467999999999999999999999999999999  33333222111   2


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+.++.|+|.| .+|.|+..|...+.|..+...+..... ..++++++|+|+|.+||.||.|+.|.++..
T Consensus       409 ~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V  476 (626)
T KOG2106|consen  409 PAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRV  476 (626)
T ss_pred             ceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence            35688999999 999999999999999988666654444 789999999999999999999999998873

>KOG0646|consensus

Probab=99.94  E-value=4.7e-25  Score=186.15  Aligned_cols=264  Identities=22%  Similarity=0.302  Sum_probs=201.3

Q ss_pred             eEeecccceeEEEEEeC-ccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          2 IIWDGLTQTKEHSVTMP-ATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~-~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      .+||+.+++..-++... ...-.++..- .+++++++.. -..+.+|.+...+.    .....--.++|.|+.-++.|.+
T Consensus        21 ~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~----~~q~~v~Pg~v~al~s~n~G~~   95 (476)
T KOG0646|consen   21 IVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQ----VVQYIVLPGPVHALASSNLGYF   95 (476)
T ss_pred             eEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhh----hhhhcccccceeeeecCCCceE
Confidence            58999999987776644 1111222221 2356666654 34688887643211    1112223477899999999988


Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCe
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKL  159 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~  159 (320)
                      ++.|+..|.+.+|.+.+|+++..+.+|-..|.++.|.  .||..|++|+.||.|.+|++-.-  +...+        +  
T Consensus        96 l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs--~dgs~iiTgskDg~V~vW~l~~l--v~a~~--------~--  161 (476)
T KOG0646|consen   96 LLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFS--DDGSHIITGSKDGAVLVWLLTDL--VSADN--------D--  161 (476)
T ss_pred             EEeecccCcEEEEEeccccHHHHHHhhccceeEEEEe--CCCcEEEecCCCccEEEEEEEee--ccccc--------C--
Confidence            8888899999999999999999999999999999885  46899999999999999987431  11111        1  


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCC--CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG--DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                            .+-++...+..|.-+|+.+...+.|  .+++++|.|.++++||+..+..+..+..+.   .+.+++++|-+..+
T Consensus       162 ------~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~---si~av~lDpae~~~  232 (476)
T KOG0646|consen  162 ------HSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPS---SIKAVALDPAERVV  232 (476)
T ss_pred             ------CCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCC---cceeEEEcccccEE
Confidence                  1335667778899999999888753  579999999999999999998776655443   35789999999999


Q ss_pred             EEEeCCCeEEEEcCCCC----------------eEEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        238 FAGYNDYTINVWDSLKC----------------CRVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~----------------~~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +.|+++|.|.+.++...                .....+.||.+  +|+|++++-||.+|+||+.||.+++||.
T Consensus       233 yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi  306 (476)
T KOG0646|consen  233 YIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDI  306 (476)
T ss_pred             EecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEec
Confidence            99999999988764332                23445779988  9999999999999999999999999995

>KOG0268|consensus

Probab=99.94  E-value=1.6e-26  Score=189.46  Aligned_cols=227  Identities=21%  Similarity=0.352  Sum_probs=187.2

Q ss_pred             ccccccccCeEEEEecCCC-CEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         59 KTVATHTSFISCCIFPNSD-QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ..+.+|...|.|++=.|.. ..+++|+.||.|+|||+....++..+++|.+.|..+++..    ..+++++.|.+|+.|-
T Consensus        60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~----~~~~tvgdDKtvK~wk  135 (433)
T KOG0268|consen   60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ----TSFFTVGDDKTVKQWK  135 (433)
T ss_pred             hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc----cceEEecCCcceeeee
Confidence            4567899999999876654 6789999999999999999999999999999999998753    5789999999999998


Q ss_pred             CCCCcEEEEeccCC------------ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEE
Q psy14961        138 MRTGYCVQSFEGHH------------NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRL  204 (320)
Q Consensus       138 ~~~~~~~~~~~~~~------------~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~i  204 (320)
                      +... .+.++.+..            ..++....|.+||.....++.++.--...|.++.|+|-.. .|++|+.|+.|.+
T Consensus       136 ~~~~-p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL  214 (433)
T KOG0268|consen  136 IDGP-PLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVL  214 (433)
T ss_pred             ccCC-cceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence            7653 444443322            2334456799999988889988887788899999999754 6788889999999


Q ss_pred             EECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-eEEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961        205 FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-CRVNHLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       205 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~-~~~~~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ||++++.++.......   ....++|+|.+--+++|++|..+..||+... .++....+|.+.|.+++|||.|+-|+|||
T Consensus       215 yD~R~~~Pl~KVi~~m---RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgs  291 (433)
T KOG0268|consen  215 YDLRQASPLKKVILTM---RTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGS  291 (433)
T ss_pred             EecccCCccceeeeec---cccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccc
Confidence            9999988775443321   2357899997778888999999999998753 45667789999999999999999999999


Q ss_pred             CCCceEeeec
Q psy14961        284 WDTTLRDEES  293 (320)
Q Consensus       284 ~D~~ir~~~~  293 (320)
                      .|++||++..
T Consensus       292 yDksIRIf~~  301 (433)
T KOG0268|consen  292 YDKSIRIFPV  301 (433)
T ss_pred             ccceEEEeec
Confidence            9999999984

>KOG0289|consensus

Probab=99.94  E-value=1.3e-25  Score=187.92  Aligned_cols=201  Identities=22%  Similarity=0.378  Sum_probs=175.4

Q ss_pred             cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE
Q psy14961         66 SFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ  145 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~  145 (320)
                      ..+.++...+....+++|+.|.++.++|...++.+..+++|...|..+.+++.  ...+++++.|..|++|......   
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~--~~~v~~aSad~~i~vws~~~~s---  294 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKD--LDTVITASADEIIRVWSVPLSS---  294 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccc--hhheeecCCcceEEeecccccc---
Confidence            34555665555678999999999999999999999999999999999888765  5689999999999999875432   


Q ss_pred             EeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        146 SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       146 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                                              +......|..+|+.+..+|.|+||++++.|++..+.|++++..+.....+...+..
T Consensus       295 ------------------------~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~  350 (506)
T KOG0289|consen  295 ------------------------EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEY  350 (506)
T ss_pred             ------------------------CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecccccee
Confidence                                    12233468899999999999999999999999999999999888777665555667


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++++|+|||-++.+|..||.|+|||+.+..-+..|.+|+++|..|+|+.||.+||++..|+.|++||.+.
T Consensus       351 ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRK  420 (506)
T KOG0289|consen  351 TSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRK  420 (506)
T ss_pred             EEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehh
Confidence            8999999999999999999999999999888899999999999999999999999999999999999643

>KOG0639|consensus

Probab=99.94  E-value=1.8e-25  Score=190.35  Aligned_cols=270  Identities=20%  Similarity=0.314  Sum_probs=211.8

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc--cccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV--ATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      .|.+-|.++..+...+++.||++ |.|+|||+.-..... ....+  ......+.+|...+++..|++|++-.++.|||+
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~-PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL  494 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKS-PVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL  494 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCC-ccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence            46778889999999999999986 779999996443321 12222  235678999999999999999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc---------------CCCe
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------DDKL  159 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~---------------~d~~  159 (320)
                      ....+....+.....-.|-+++.++|.+.+++++.||.|.|||+.+...++.|++|...+.               -|.+
T Consensus       495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDnt  574 (705)
T KOG0639|consen  495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNT  574 (705)
T ss_pred             cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccc
Confidence            7654432222223333444556677888999999999999999999999999999876432               3678


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  239 (320)
                      |+-||+++++..+.. .....|.++.++|++++|+.|-+++.+.+-.....+......++.   ++.++.|++.|+++++
T Consensus       575 vRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheS---cVLSlKFa~cGkwfvS  650 (705)
T KOG0639|consen  575 VRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHES---CVLSLKFAYCGKWFVS  650 (705)
T ss_pred             eeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEEEecCCccceeeccccc---EEEEEEecccCceeee
Confidence            999999998766543 245789999999999999999999999998877655544443432   4679999999999999


Q ss_pred             EeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        240 GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      -+.|.-+..|.+--+..+.+.. -..+|.+..+|.|.++++|||.|+..-+|+.
T Consensus       651 tGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  651 TGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             cCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            9999999999876565665433 3568999999999999999999988887764

>KOG0308|consensus

Probab=99.94  E-value=6.2e-26  Score=198.37  Aligned_cols=264  Identities=20%  Similarity=0.340  Sum_probs=207.6

Q ss_pred             CeEeecccce------eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe-
Q psy14961          1 MIIWDGLTQT------KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-   73 (320)
Q Consensus         1 ~~~W~~~~~~------~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~-   73 (320)
                      |++|+.....      +..++..|..||+.++...+++-|+++|.|-+|++|+.....  .....++..|...|.|+++ 
T Consensus        49 i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~--~~c~stir~H~DYVkcla~~  126 (735)
T KOG0308|consen   49 IRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN--TFCMSTIRTHKDYVKCLAYI  126 (735)
T ss_pred             EEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc--chhHhhhhcccchheeeeec
Confidence            5688765322      356677889999999999999999999999999999975433  3456788999999999999 


Q ss_pred             cCCCCEEEEEeCCCeEEEEECCCc--ceee--------ecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         74 PNSDQQILTGSGDCTCALWDVESS--QLLQ--------SFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        74 ~~~~~~l~s~~~dg~v~iwd~~~~--~~~~--------~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      .++...+++||-|+.|.+||++++  +.+.        .+. ++..++++++.  .+.|..+++|+.++.+++||.+++ 
T Consensus       127 ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~--N~t~t~ivsGgtek~lr~wDprt~-  203 (735)
T KOG0308|consen  127 AKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM--NQTGTIIVSGGTEKDLRLWDPRTC-  203 (735)
T ss_pred             ccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeec--CCcceEEEecCcccceEEeccccc-
Confidence            566678899999999999999876  2222        223 67788888766  445778889998888888887654 


Q ss_pred             EEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961        143 CVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL  222 (320)
Q Consensus       143 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~  222 (320)
                                                +.+..+.||+..|..+-.+++|..++++|.||+|++||+...+.+..+..+...
T Consensus       204 --------------------------~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~  257 (735)
T KOG0308|consen  204 --------------------------KKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG  257 (735)
T ss_pred             --------------------------cceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc
Confidence                                      344556789999999999999999999999999999999988877776655443


Q ss_pred             eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHh
Q psy14961        223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRY  297 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~  297 (320)
                        +.++..+|+=+.+++|+.||.|..=|+.+.....-+-..+.+|..+..+-+.+-+=++++|+.|+-|-.+...
T Consensus       258 --VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~  330 (735)
T KOG0308|consen  258 --VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDI  330 (735)
T ss_pred             --eEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCcccc
Confidence              4667777888999999999999998887743333333456678888887655555778899999999865443

>KOG0643|consensus

Probab=99.94  E-value=1.2e-24  Score=171.79  Aligned_cols=221  Identities=19%  Similarity=0.332  Sum_probs=183.5

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      .+.+|+.+++.+.|..+|.+|++++.|.+..+|=..+++.+..+.+|.+.|+++++..  +...+++|+.|.+++|||+.
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~--~s~~liTGSAD~t~kLWDv~   82 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW--DSKHLITGSADQTAKLWDVE   82 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC--CcceeeeccccceeEEEEcC
Confidence            4678999999999999999999999999999998888999999999999999998754  46799999999999999999


Q ss_pred             CCcEEEEeccCCc-------------cc------cCCCeEEEEECc-------CCeeeeeecCCCCCeEEEEEcCCCCEE
Q psy14961        140 TGYCVQSFEGHHN-------------LI------TDDKLVNIWDMR-------TGYCVQSFEGHQSDVNSVKFHPSGDAV  193 (320)
Q Consensus       140 ~~~~~~~~~~~~~-------------~~------~~d~~i~iwd~~-------~~~~~~~~~~~~~~v~~v~~~p~g~~l  193 (320)
                      +|+++..+.....             .+      .....|.++|++       ..++...+..+...++++-|.|.++++
T Consensus        83 tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i  162 (327)
T KOG0643|consen   83 TGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI  162 (327)
T ss_pred             CCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence            9998876642211             11      234578899988       455677888888999999999999999


Q ss_pred             EEeeCCCeEEEEECCCCeeEeEE-ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEE
Q psy14961        194 ATGSDDATCRLFDLRADKEVACY-KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       194 ~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~  272 (320)
                      ++|.+||.|.+||+++++.+... +.+.  ..++.+.++||.+++++|+.|.+.++||..+...+.++. -+-||++.++
T Consensus       163 i~Ghe~G~is~~da~~g~~~v~s~~~h~--~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aai  239 (327)
T KOG0643|consen  163 IAGHEDGSISIYDARTGKELVDSDEEHS--SKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAI  239 (327)
T ss_pred             EEecCCCcEEEEEcccCceeeechhhhc--cccccccccCCcceEEecccCccceeeeccceeeEEEee-ecccccceec
Confidence            99999999999999998654332 2222  257889999999999999999999999999888887765 3568999999


Q ss_pred             CcCCCeEEE-ecCC
Q psy14961        273 SPDGTAFSS-GSWD  285 (320)
Q Consensus       273 s~~~~~l~s-~s~D  285 (320)
                      +|....++- ||++
T Consensus       240 sP~~d~VilgGGqe  253 (327)
T KOG0643|consen  240 SPLLDHVILGGGQE  253 (327)
T ss_pred             ccccceEEecCCce
Confidence            996555444 4443

>KOG2445|consensus

Probab=99.94  E-value=2.1e-24  Score=173.65  Aligned_cols=260  Identities=15%  Similarity=0.223  Sum_probs=190.7

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec--CCCCEEEEEeCCCeEEEEEC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP--NSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~v~iwd~   94 (320)
                      .|.+.|+++.|++-|.++|+++.|++++|||+..+......-.....|.+.|..+.|.  .-|+.+++++.|+++.||.-
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            4668899999999999999999999999999754444444445667899999999883  45788999999999999974


Q ss_pred             CCc---------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEEC
Q psy14961         95 ESS---------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDM  165 (320)
Q Consensus        95 ~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~  165 (320)
                      ...         .....+....+.|.++.|+|..-|-.+++++.||.+|+|+....-.+.                -|.+
T Consensus        91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs----------------~W~L  154 (361)
T KOG2445|consen   91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLS----------------QWTL  154 (361)
T ss_pred             cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccc----------------cchh
Confidence            211         123445556788999999999889999999999999999975432222                2222


Q ss_pred             cCCee--eeeecCCCCCeEEEEEcCC---CCEEEEeeCC-----CeEEEEECCCCe-eEeE-EecCcceeeeEEEEEecC
Q psy14961        166 RTGYC--VQSFEGHQSDVNSVKFHPS---GDAVATGSDD-----ATCRLFDLRADK-EVAC-YKKDSILFGATSVDFSVS  233 (320)
Q Consensus       166 ~~~~~--~~~~~~~~~~v~~v~~~p~---g~~l~s~s~d-----g~i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~~s~~  233 (320)
                      .....  +.....+..+..|+.|+|.   ..+||.|+.+     +.+.||....+. .... -+.......+..++|.|+
T Consensus       155 q~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn  234 (361)
T KOG2445|consen  155 QHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPN  234 (361)
T ss_pred             hhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccc
Confidence            11000  0011224556789999985   3567777765     478899765432 2111 111122234788999986


Q ss_pred             ----CcEEEEEeCCCeEEEEcCCC--------------------CeEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        234 ----GRLLFAGYNDYTINVWDSLK--------------------CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       234 ----~~~l~~g~~dg~v~~wd~~~--------------------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                          -.+||+++.|| |+||.+..                    -..+..+..|..+|+.+.|+-.|.+|+|.|.||++|
T Consensus       235 ~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VR  313 (361)
T KOG2445|consen  235 IGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVR  313 (361)
T ss_pred             cCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceee
Confidence                35899999999 99998652                    123566789999999999999999999999999999


Q ss_pred             eeec
Q psy14961        290 DEES  293 (320)
Q Consensus       290 ~~~~  293 (320)
                      +|.+
T Consensus       314 LWka  317 (361)
T KOG2445|consen  314 LWKA  317 (361)
T ss_pred             ehhh
Confidence            9986

>KOG0267|consensus

Probab=99.94  E-value=9.6e-27  Score=205.57  Aligned_cols=236  Identities=28%  Similarity=0.459  Sum_probs=198.8

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      .|...|.++..-..+..+++|+.|..+-+|.+..    ......+.+|.++|.|+.|..+...|++|+.+|+|++||++.
T Consensus        26 ~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k----p~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee  101 (825)
T KOG0267|consen   26 AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK----PNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE  101 (825)
T ss_pred             hhhhhhceeeeeccceeeccCCCceeeccccccC----CchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhh
Confidence            3455666666656678899999999999997642    122334789999999999999888999999999999999999


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      .+.++.+.+|...+.++.|+|.  +.++++|+.|+.+++||.+..-                           |.....+
T Consensus       102 Ak~vrtLtgh~~~~~sv~f~P~--~~~~a~gStdtd~~iwD~Rk~G---------------------------c~~~~~s  152 (825)
T KOG0267|consen  102 AKIVRTLTGHLLNITSVDFHPY--GEFFASGSTDTDLKIWDIRKKG---------------------------CSHTYKS  152 (825)
T ss_pred             hhhhhhhhccccCcceeeeccc--eEEeccccccccceehhhhccC---------------------------ceeeecC
Confidence            9999999999999999998765  7899999999999999987433                           3444556


Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR  256 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~  256 (320)
                      |...|.++.|+|+|.+++++++|.+++|||+..++....|..+.  ..+.++.|+|..-+++.|+.|+++++||+.+...
T Consensus       153 ~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e--~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~  230 (825)
T KOG0267|consen  153 HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHE--GKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEV  230 (825)
T ss_pred             CcceeEEEeecCCCceeeccCCcceeeeeccccccccccccccc--ccccccccCchhhhhccCCCCceeeeeccceeEE
Confidence            77889999999999999999999999999999988877766432  2356788999999999999999999999998888


Q ss_pred             EEEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961        257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                      +....+....|.+++|+|+++.+++|-.+..
T Consensus       231 I~s~~~~~~~v~~~~fn~~~~~~~~G~q~sl  261 (825)
T KOG0267|consen  231 ISSGKPETDGVRSLAFNPDGKIVLSGEQISL  261 (825)
T ss_pred             eeccCCccCCceeeeecCCceeeecCchhhh
Confidence            8888888889999999999999998876543

>KOG0310|consensus

Probab=99.94  E-value=1.6e-24  Score=183.81  Aligned_cols=223  Identities=22%  Similarity=0.379  Sum_probs=180.5

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC-EEEEEeCCCeEEEEECCCcc
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ..|.++.|-.||.++|+|...|.++|||..    +......+.+|+.++....|++.++ .+++|+.|+.+++||+.+..
T Consensus        69 ~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k----~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~  144 (487)
T KOG0310|consen   69 DVVYSVDFRSDGRLLAAGDESGHVKVFDMK----SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY  144 (487)
T ss_pred             cceeEEEeecCCeEEEccCCcCcEEEeccc----cHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE
Confidence            358899999999999999999999999852    3345567889999999999987664 56788888999999999887


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-cEEEEeccC------------Cccc-cCCCeEEEEE
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-YCVQSFEGH------------HNLI-TDDKLVNIWD  164 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-~~~~~~~~~------------~~~~-~~d~~i~iwd  164 (320)
                      ....+.+|...|.+.+++|.. ++.+++|+-||.|++||++.. ..+.+++-.            ..++ .....+++||
T Consensus       145 v~~~l~~htDYVR~g~~~~~~-~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWD  223 (487)
T KOG0310|consen  145 VQAELSGHTDYVRCGDISPAN-DHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVKVWD  223 (487)
T ss_pred             EEEEecCCcceeEeeccccCC-CeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEE
Confidence            766889999999999998764 579999999999999999876 444444311            1122 2456899999


Q ss_pred             CcCCe-eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        165 MRTGY-CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       165 ~~~~~-~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      +.+|. .+..+..|...|+|+++..++..|+|++-|+.+++||+.+-+.+..+....   ++.+++.+|++..++.|-.+
T Consensus       224 l~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~---pvLsiavs~dd~t~viGmsn  300 (487)
T KOG0310|consen  224 LTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPG---PVLSIAVSPDDQTVVIGMSN  300 (487)
T ss_pred             ecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeeccc---ceeeEEecCCCceEEEeccc
Confidence            98664 444455599999999999999999999999999999987766665554433   35789999999999999999


Q ss_pred             CeEEEEc
Q psy14961        244 YTINVWD  250 (320)
Q Consensus       244 g~v~~wd  250 (320)
                      |.+.+=+
T Consensus       301 Glv~~rr  307 (487)
T KOG0310|consen  301 GLVSIRR  307 (487)
T ss_pred             ceeeeeh
Confidence            9887753

>KOG0772|consensus

Probab=99.94  E-value=1.4e-25  Score=191.44  Aligned_cols=229  Identities=22%  Similarity=0.308  Sum_probs=171.0

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc----eeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEE
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ----LLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVN  134 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~  134 (320)
                      .+.+|...|.++.+.+.|.++++|+.|.+|++||.+.-.    ..+.+. .-...|.++.+++  .|+.|++.+.....+
T Consensus       162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~--Tg~~iLvvsg~aqak  239 (641)
T KOG0772|consen  162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSV--TGDQILVVSGSAQAK  239 (641)
T ss_pred             eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecC--CCCeEEEEecCccee
Confidence            456788899999999999999999999999999986421    122222 2234567777755  688899888888999


Q ss_pred             EEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee-
Q psy14961        135 IWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE-  212 (320)
Q Consensus       135 lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~-  212 (320)
                      |+|...........+.+.+         -|+      ...+||...++|.+|+|.. ..|++++.||+++|||+...+. 
T Consensus       240 l~DRdG~~~~e~~KGDQYI---------~Dm------~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q  304 (641)
T KOG0772|consen  240 LLDRDGFEIVEFSKGDQYI---------RDM------YNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ  304 (641)
T ss_pred             EEccCCceeeeeeccchhh---------hhh------hccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh
Confidence            9997655555554444322         122      2346899999999999975 5789999999999999976443 


Q ss_pred             EeEEecC---cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE---EEEeecCCC--ceeEEEECcCCCeEEEecC
Q psy14961        213 VACYKKD---SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR---VNHLMGHEN--RVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       213 ~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~---~~~~~~h~~--~i~~i~~s~~~~~l~s~s~  284 (320)
                      +..+...   ..-..+++++|+|+|+.+|+|+.||.|.+|+..+...   ...-.+|..  .|+||+||+||++|+|=|.
T Consensus       305 ~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~  384 (641)
T KOG0772|consen  305 LQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGF  384 (641)
T ss_pred             eeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccC
Confidence            3333322   1223468899999999999999999999999654322   222357877  8999999999999999999


Q ss_pred             CCceEeeecchHhhhheeeee
Q psy14961        285 DTTLRDEESKNRYVQYLLRSR  305 (320)
Q Consensus       285 D~~ir~~~~~~~~~~~~~~~~  305 (320)
                      |.++|+||.++...-.+.+.+
T Consensus       385 D~tLKvWDLrq~kkpL~~~tg  405 (641)
T KOG0772|consen  385 DDTLKVWDLRQFKKPLNVRTG  405 (641)
T ss_pred             CCceeeeeccccccchhhhcC
Confidence            999999998776554444433

>KOG1539|consensus

Probab=99.94  E-value=3.2e-24  Score=192.41  Aligned_cols=287  Identities=20%  Similarity=0.379  Sum_probs=218.0

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |.||++.+++.++.+......|+++.=+|-=..++.|..+|+|.++++..++    ..-++..-.+.|+++.|..||..+
T Consensus       184 lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dk----il~sFk~d~g~VtslSFrtDG~p~  259 (910)
T KOG1539|consen  184 LQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDK----ILMSFKQDWGRVTSLSFRTDGNPL  259 (910)
T ss_pred             EEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCc----EEEEEEccccceeEEEeccCCCee
Confidence            5799999999999888888999999999988899999999999999985322    122232224899999999888665


Q ss_pred             -EEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC--C--c------------
Q psy14961         81 -LTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT--G--Y------------  142 (320)
Q Consensus        81 -~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~--~--~------------  142 (320)
                       ++|+..|.+.+||++..+.....+ .|.+.+....+.+.  ...+.+++.|..+++|=..+  |  +            
T Consensus       260 las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~--epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp  337 (910)
T KOG1539|consen  260 LASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPG--EPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPP  337 (910)
T ss_pred             EEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCC--CceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCc
Confidence             556666999999999887766554 78788877776553  45778888888877763221  1  0            


Q ss_pred             -EEEEe--c---------------------------cC--C-------cc---------------------------c--
Q psy14961        143 -CVQSF--E---------------------------GH--H-------NL---------------------------I--  154 (320)
Q Consensus       143 -~~~~~--~---------------------------~~--~-------~~---------------------------~--  154 (320)
                       +++-+  +                           ++  .       +.                           +  
T Consensus       338 ~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~  417 (910)
T KOG1539|consen  338 SCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITA  417 (910)
T ss_pred             hheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEE
Confidence             00000  0                           00  0       00                           0  


Q ss_pred             -------------------------------------------------cCCCeEEEEECcCCeeeeee---cCCCCCeE
Q psy14961        155 -------------------------------------------------TDDKLVNIWDMRTGYCVQSF---EGHQSDVN  182 (320)
Q Consensus       155 -------------------------------------------------~~d~~i~iwd~~~~~~~~~~---~~~~~~v~  182 (320)
                                                                       ...|.|.+|++.+|-...++   +.|..+|.
T Consensus       418 h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~  497 (910)
T KOG1539|consen  418 HKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVT  497 (910)
T ss_pred             ecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCcee
Confidence                                                             01345666677666655566   57999999


Q ss_pred             EEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec
Q psy14961        183 SVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG  262 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~  262 (320)
                      .++...-++.+++++.+|.+++||.............   .++..+..+....+++.+..|-.|.++|..+.+.++.|.+
T Consensus       498 gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~---~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g  574 (910)
T KOG1539|consen  498 GLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLG---SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWG  574 (910)
T ss_pred             EEEecCCCceEEEccCcceEEEEecCCcceeeeeccC---CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhc
Confidence            9999998999999999999999999876644333322   2345566777788999999999999999999889999999


Q ss_pred             CCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        263 HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       263 h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      |.+.|++++|||||++|++++.|++||+||.-..
T Consensus       575 h~nritd~~FS~DgrWlisasmD~tIr~wDlpt~  608 (910)
T KOG1539|consen  575 HGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG  608 (910)
T ss_pred             cccceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence            9999999999999999999999999999997443

>KOG0640|consensus

Probab=99.94  E-value=8.7e-26  Score=181.84  Aligned_cols=217  Identities=25%  Similarity=0.401  Sum_probs=171.0

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC------------c------ceeeecccCccceeEEEEeeCCCC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES------------S------QLLQSFHGHTGELMDLDLAPSETG  121 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~------------~------~~~~~~~~~~~~v~~~~~~~~~~~  121 (320)
                      .+..|++++.+..|+++|.++++|+.|-.|+|.|++.            +      -.++.+..|..+|.++.|+|.  .
T Consensus       107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr--e  184 (430)
T KOG0640|consen  107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR--E  184 (430)
T ss_pred             EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch--h
Confidence            3457999999999999999999999999999999861            1      145677889999999999875  5


Q ss_pred             CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCe
Q psy14961        122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT  201 (320)
Q Consensus       122 ~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~  201 (320)
                      ..|++|+.|+.|++||.......+.+             +            .-....+|.+++|||.|++|+.|..--+
T Consensus       185 ~ILiS~srD~tvKlFDfsK~saKrA~-------------K------------~~qd~~~vrsiSfHPsGefllvgTdHp~  239 (430)
T KOG0640|consen  185 TILISGSRDNTVKLFDFSKTSAKRAF-------------K------------VFQDTEPVRSISFHPSGEFLLVGTDHPT  239 (430)
T ss_pred             heEEeccCCCeEEEEecccHHHHHHH-------------H------------HhhccceeeeEeecCCCceEEEecCCCc
Confidence            69999999999999998542211110             0            0113347999999999999999999999


Q ss_pred             EEEEECCCCeeEe-EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCC-ceeEEEECcCCCe
Q psy14961        202 CRLFDLRADKEVA-CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHEN-RVSCLQVSPDGTA  278 (320)
Q Consensus       202 i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~-~i~~i~~s~~~~~  278 (320)
                      +++||+++-+... ..+.....-.+.++.+++.|++.++|+.||.|++||--+.+.+.++ .+|.+ .|.+..|+.||++
T Consensus       240 ~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~ky  319 (430)
T KOG0640|consen  240 LRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKY  319 (430)
T ss_pred             eeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeE
Confidence            9999998765432 1222222335788999999999999999999999997777777766 46754 8999999999999


Q ss_pred             EEEecCCCceEeeec-chHhhhheee
Q psy14961        279 FSSGSWDTTLRDEES-KNRYVQYLLR  303 (320)
Q Consensus       279 l~s~s~D~~ir~~~~-~~~~~~~~~~  303 (320)
                      +.|.|.|.++++|+. ..+..+.++.
T Consensus       320 iLsSG~DS~vkLWEi~t~R~l~~YtG  345 (430)
T KOG0640|consen  320 ILSSGKDSTVKLWEISTGRMLKEYTG  345 (430)
T ss_pred             EeecCCcceeeeeeecCCceEEEEec
Confidence            999999999999994 3444433333

>KOG1274|consensus

Probab=99.94  E-value=5.9e-24  Score=192.59  Aligned_cols=251  Identities=18%  Similarity=0.237  Sum_probs=192.4

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      .|....+.++|.|+|++|.+++.||.|++|+.....+..   ..+.-+...|.++...  ..++++|+.+++|..|....
T Consensus        11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P---~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps   85 (933)
T KOG1274|consen   11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEP---ETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPS   85 (933)
T ss_pred             hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCC---chhhccCceeEEEeec--ccceEEeeccceEEEeeCCC
Confidence            456667899999999999999999999999864331111   1222266777777653  45899999999999999877


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      +..-..+....-++..+++.  -+|++++.||.|-.|++-++...                           .....+++
T Consensus        86 ~~~~~iL~Rftlp~r~~~v~--g~g~~iaagsdD~~vK~~~~~D~---------------------------s~~~~lrg  136 (933)
T KOG1274|consen   86 GEEDTILARFTLPIRDLAVS--GSGKMIAAGSDDTAVKLLNLDDS---------------------------SQEKVLRG  136 (933)
T ss_pred             CCccceeeeeeccceEEEEe--cCCcEEEeecCceeEEEEecccc---------------------------chheeecc
Confidence            65433333345567777764  45889999999988888776543                           23455678


Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc------eeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI------LFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      |..+|.++.|+|++++||+.+-||.+++||+..+........-..      .--+..++|+|+|..++....|+.|++|+
T Consensus       137 h~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~  216 (933)
T KOG1274|consen  137 HDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYS  216 (933)
T ss_pred             cCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEc
Confidence            999999999999999999999999999999987654333221110      01245789999988888888899999999


Q ss_pred             CCCCeEEEEeec--CCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhhe
Q psy14961        251 SLKCCRVNHLMG--HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYL  301 (320)
Q Consensus       251 ~~~~~~~~~~~~--h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~  301 (320)
                      ......+..+..  |...++.++|+|+|+|||+++.|+.|-+|+.+..+++-+
T Consensus       217 r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~~~~  269 (933)
T KOG1274|consen  217 RKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHERHEF  269 (933)
T ss_pred             cCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchhccc
Confidence            988888777653  444599999999999999999999999999886555433

>KOG0293|consensus

Probab=99.94  E-value=6.7e-25  Score=182.73  Aligned_cols=242  Identities=19%  Similarity=0.357  Sum_probs=183.0

Q ss_pred             eEeeccccee---EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecCCC
Q psy14961          2 IIWDGLTQTK---EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSD   77 (320)
Q Consensus         2 ~~W~~~~~~~---~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~   77 (320)
                      +||++.....   .+.+..|..+|.-+.||||.++|++++.|..+++||++..+.    ...+ .+|...+.|++|-|++
T Consensus       249 iiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~----~~~y~~~~~~S~~sc~W~pDg  324 (519)
T KOG0293|consen  249 IIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL----RHLYPSGLGFSVSSCAWCPDG  324 (519)
T ss_pred             EEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchh----hhhcccCcCCCcceeEEccCC
Confidence            4787665543   456678889999999999999999999999999999864332    1111 1245778899999999


Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE---------EE-
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV---------QS-  146 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~---------~~-  146 (320)
                      ..+++|+.|+++..||++.+ .+..+++.. -.|.++++  .+||+.+++.+.|..|++++..+....         .+ 
T Consensus       325 ~~~V~Gs~dr~i~~wdlDgn-~~~~W~gvr~~~v~dlai--t~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~  401 (519)
T KOG0293|consen  325 FRFVTGSPDRTIIMWDLDGN-ILGNWEGVRDPKVHDLAI--TYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSF  401 (519)
T ss_pred             ceeEecCCCCcEEEecCCcc-hhhcccccccceeEEEEE--cCCCcEEEEEecccceeeechhhhhhhccccccCceeEE
Confidence            99999999999999998744 444454433 34666766  557999999999999999998654322         11 


Q ss_pred             -eccCCcc--c-cCCCeEEEEECcCCeeeeeecCCCCC--eEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEEecC
Q psy14961        147 -FEGHHNL--I-TDDKLVNIWDMRTGYCVQSFEGHQSD--VNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       147 -~~~~~~~--~-~~d~~i~iwd~~~~~~~~~~~~~~~~--v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~  219 (320)
                       +......  + -.+..+.+||++....++...||...  |-.-+|.- +...++|||+|+.|+||+-.+++++.....+
T Consensus       402 ~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGH  481 (519)
T KOG0293|consen  402 SISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGH  481 (519)
T ss_pred             EEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCC
Confidence             1222111  1 25778999999988888888888754  33445543 3468899999999999999999999888777


Q ss_pred             cceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCC
Q psy14961        220 SILFGATSVDFSVSG-RLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~  252 (320)
                      ..  .+..++++|.. .++|+|+.||+|+||...
T Consensus       482 s~--~vNcVswNP~~p~m~ASasDDgtIRIWg~~  513 (519)
T KOG0293|consen  482 SK--TVNCVSWNPADPEMFASASDDGTIRIWGPS  513 (519)
T ss_pred             cc--eeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence            54  45789999965 478999999999999754

>KOG0275|consensus

Probab=99.93  E-value=1.7e-25  Score=181.32  Aligned_cols=241  Identities=22%  Similarity=0.364  Sum_probs=188.7

Q ss_pred             CeEeecccceeE--------EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEE
Q psy14961          1 MIIWDGLTQTKE--------HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCC   71 (320)
Q Consensus         1 ~~~W~~~~~~~~--------~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~   71 (320)
                      |-+||-.+++..        ..+.+....|.|+.|+.|.++||+|+.||.|++|.+..    ..+...+. .|...|+|+
T Consensus       237 iEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~t----G~ClRrFdrAHtkGvt~l  312 (508)
T KOG0275|consen  237 IEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIET----GQCLRRFDRAHTKGVTCL  312 (508)
T ss_pred             eeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEec----chHHHHhhhhhccCeeEE
Confidence            358988776632        23556778999999999999999999999999999853    33344444 899999999


Q ss_pred             EecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         72 IFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        72 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      .|+.++..+++++.|.++++..+..++++..+++|.+-|....|  .++|+.+++++.||+|++|+..+..|+.+|....
T Consensus       313 ~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~f--t~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~  390 (508)
T KOG0275|consen  313 SFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATF--TDDGHHIISASSDGTVKVWHGKTTECLSTFKPLG  390 (508)
T ss_pred             EEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEE--cCCCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence            99999999999999999999999999999999999999988777  4579999999999999999999998887775332


Q ss_pred             cc------------------ccCCCeEEEEECcCCeeeeeecC---CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        152 NL------------------ITDDKLVNIWDMRTGYCVQSFEG---HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       152 ~~------------------~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                      .-                  .....++.+-++ .|+.+.++..   ..+.--+.+.+|.|.++++.++|+.++.+.+.++
T Consensus       391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG  469 (508)
T KOG0275|consen  391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSG  469 (508)
T ss_pred             CcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecC
Confidence            11                  112344555554 3444554432   2345567889999999999999999999999888


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      +.......+..  .+..++-+|..+.||+=++||.+++|.
T Consensus       470 ~LE~tl~VhEk--dvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  470 KLERTLPVHEK--DVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ceeeeeecccc--cccccccCcccchhhhhcccchhhhcC
Confidence            75444332221  234566789999999999999999994

>KOG2048|consensus

Probab=99.93  E-value=3e-23  Score=182.42  Aligned_cols=245  Identities=15%  Similarity=0.242  Sum_probs=196.4

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccc-ccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH-TSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      ...+..|.++||+.+.+.||.+-.+|.|.+|++..   .......+.++ ...|-.++|. ++..|++.+.+|.|.-||+
T Consensus        22 d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~---~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl   97 (691)
T KOG2048|consen   22 DYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSN---NWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDL   97 (691)
T ss_pred             eeeccceEEEEEeccCCceeeeccCCcEEEEccCC---CceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEec
Confidence            34567899999999999999999999999999853   33334445444 5678889998 5778999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      .+.+....+....+.+++++.+|.  +..++.|+.||.+..++...+.....                         ..+
T Consensus        98 ~~lk~~~~~d~~gg~IWsiai~p~--~~~l~IgcddGvl~~~s~~p~~I~~~-------------------------r~l  150 (691)
T KOG2048|consen   98 HTLKQKYNIDSNGGAIWSIAINPE--NTILAIGCDDGVLYDFSIGPDKITYK-------------------------RSL  150 (691)
T ss_pred             ccCceeEEecCCCcceeEEEeCCc--cceEEeecCCceEEEEecCCceEEEE-------------------------eec
Confidence            999999888888899999998775  56899999999777777655432211                         112


Q ss_pred             cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-----c-ceeeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961        175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-----S-ILFGATSVDFSVSGRLLFAGYNDYTINV  248 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----~-~~~~~~~~~~s~~~~~l~~g~~dg~v~~  248 (320)
                      .-.++.|.+++|+|++..+++|+.||.|++||...+..+......     . ...-+.++.|-.++ .|++|.+.|+|.+
T Consensus       151 ~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~F  229 (691)
T KOG2048|consen  151 MRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTF  229 (691)
T ss_pred             ccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEE
Confidence            224568999999999999999999999999999988776532211     0 11224566666554 7899999999999


Q ss_pred             EcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        249 WDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       249 wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ||...+..+..+.-|.+-|.+|+.++++.++++||.|++|--+.
T Consensus       230 Wd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~  273 (691)
T KOG2048|consen  230 WDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYS  273 (691)
T ss_pred             EcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEE
Confidence            99999999999999999999999999999999999999877555

>KOG2055|consensus

Probab=99.93  E-value=1.1e-23  Score=177.76  Aligned_cols=271  Identities=16%  Similarity=0.252  Sum_probs=204.1

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC-EEEEEeCCCeEEEEECCCcc
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ..|+++.|+|....|++|+.|+.+++|.++...+  ...+.+.....+|.++.|.++|. .++++++-..+..||+++.+
T Consensus       214 ~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N--~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak  291 (514)
T KOG2055|consen  214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVN--PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK  291 (514)
T ss_pred             CCceEEEecCCCceEEEecCCCcEEEEEecCccC--hhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence            5799999999999999999999999999975443  34555666678999999999998 89999999999999998876


Q ss_pred             eee--ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-----------ccCCc---cccCCCeEEE
Q psy14961         99 LLQ--SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-----------EGHHN---LITDDKLVNI  162 (320)
Q Consensus        99 ~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-----------~~~~~---~~~~d~~i~i  162 (320)
                      ..+  ...++..... -.|..++++++|+..+..|.|.|.-..++..+.++           ..+..   ..+.+|.|.+
T Consensus       292 ~~k~~~~~g~e~~~~-e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v  370 (514)
T KOG2055|consen  292 VTKLKPPYGVEEKSM-ERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYV  370 (514)
T ss_pred             cccccCCCCcccchh-heeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEE
Confidence            532  2333332221 12455678899999999999999988877655433           22221   2246889999


Q ss_pred             EECcCCeeeeeecCCCC-CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee----EeEEecCcceeeeEEEEEecCCcEE
Q psy14961        163 WDMRTGYCVQSFEGHQS-DVNSVKFHPSGDAVATGSDDATCRLFDLRADKE----VACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       163 wd~~~~~~~~~~~~~~~-~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      ||++...++..+..... --++++.+++|.+||+|+..|.|.|||.++...    .-..........++++.|+||+++|
T Consensus       371 ~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiL  450 (514)
T KOG2055|consen  371 WNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQIL  450 (514)
T ss_pred             EecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhh
Confidence            99999999888764322 235788889999999999999999999654211    1111112233468899999999999


Q ss_pred             EEEeC--CCeEEEEcCCCCeEEEEeecC---CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        238 FAGYN--DYTINVWDSLKCCRVNHLMGH---ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       238 ~~g~~--dg~v~~wd~~~~~~~~~~~~h---~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      |.++.  ...+++-.+-+......+...   -+-|+|++|||.|-+||.|-.+|.+++|..
T Consensus       451 AiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL  511 (514)
T KOG2055|consen  451 AIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL  511 (514)
T ss_pred             hhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEee
Confidence            99884  567888776665544444332   346899999999999999999999999986

>KOG0299|consensus

Probab=99.93  E-value=5.6e-24  Score=179.39  Aligned_cols=235  Identities=23%  Similarity=0.434  Sum_probs=187.2

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee----ee---c-----------ccCccceeEEEEeeCCC
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL----QS---F-----------HGHTGELMDLDLAPSET  120 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~---~-----------~~~~~~v~~~~~~~~~~  120 (320)
                      ..+..|..++.|+..++++.+.++++.|++|.-|++.+++..    ..   +           +.|...+.+++  .++|
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~a--vS~D  213 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLA--VSSD  213 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEE--EcCC
Confidence            455678999999999999999999999999999998877532    11   0           15666665554  4678


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEE
Q psy14961        121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVK  185 (320)
Q Consensus       121 ~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~  185 (320)
                      |++|++|+.|..|.+|+..+...+..+.+|...+               +.|..+++|++.....+.++-+|+..|..|.
T Consensus       214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id  293 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID  293 (479)
T ss_pred             CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence            9999999999999999999999998888887654               3589999999998888999999999999999


Q ss_pred             EcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-cC-
Q psy14961        186 FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-GH-  263 (320)
Q Consensus       186 ~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-~h-  263 (320)
                      -..-++.+-.|+.|+++++|++.....+ .|.....  .+.+++|- +...+++|+.+|.|.+|++.+.+++.+.. +| 
T Consensus       294 aL~reR~vtVGgrDrT~rlwKi~eesql-ifrg~~~--sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHg  369 (479)
T KOG0299|consen  294 ALSRERCVTVGGRDRTVRLWKIPEESQL-IFRGGEG--SIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHG  369 (479)
T ss_pred             hhcccceEEeccccceeEEEecccccee-eeeCCCC--CeeeEEEe-cccceeeccCCceEEEeeecccCceeEeecccc
Confidence            8877776666779999999999654333 3333221  23455555 45678999999999999998888775442 33 


Q ss_pred             ----------CCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        264 ----------ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       264 ----------~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                                ..+|++|+..|...++||||++|.+|+|....-+++
T Consensus       370 v~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~  415 (479)
T KOG0299|consen  370 VIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRA  415 (479)
T ss_pred             ccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccc
Confidence                      128999999999999999999999999997665443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.93  E-value=5.2e-22  Score=170.65  Aligned_cols=259  Identities=13%  Similarity=0.126  Sum_probs=179.3

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |++||..+++....+..+ ..+..++|+|+++.+ ++++.++.+++||.....    ....+..+.. +..+.++++++.
T Consensus        13 v~~~d~~t~~~~~~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~----~~~~~~~~~~-~~~~~~~~~g~~   86 (300)
T TIGR03866        13 ISVIDTATLEVTRTFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGE----VIGTLPSGPD-PELFALHPNGKI   86 (300)
T ss_pred             EEEEECCCCceEEEEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCc----EEEeccCCCC-ccEEEECCCCCE
Confidence            478999888776665544 346789999999976 567788999999975321    1222333332 456778888887


Q ss_pred             EEEE-eCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC-eEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         80 ILTG-SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK-LVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        80 l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      ++++ +.|+.+++||+.+.+.+..+.. ...+..+++  +++|+.+++++.++ .+..||.+++......          
T Consensus        87 l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~--~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~----------  153 (300)
T TIGR03866        87 LYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAV--SPDGKIVVNTSETTNMAHFIDTKTYEIVDNV----------  153 (300)
T ss_pred             EEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEE--CCCCCEEEEEecCCCeEEEEeCCCCeEEEEE----------
Confidence            7655 5689999999998877766652 233455655  55788888887765 4566777655432211          


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE-eeCCCeEEEEECCCCeeEeEEecCc-----ceeeeEEEEEe
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT-GSDDATCRLFDLRADKEVACYKKDS-----ILFGATSVDFS  231 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~s  231 (320)
                                       . ....+.+++|+|+|+.|+. +..++.+.+||+.+++.+..+....     .......++|+
T Consensus       154 -----------------~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  215 (300)
T TIGR03866       154 -----------------L-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLT  215 (300)
T ss_pred             -----------------E-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEEC
Confidence                             1 1123467899999998854 4569999999999887655443211     01123467899


Q ss_pred             cCCcEEEEE-eCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEe-cCCCceEeeecchHh
Q psy14961        232 VSGRLLFAG-YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG-SWDTTLRDEESKNRY  297 (320)
Q Consensus       232 ~~~~~l~~g-~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~-s~D~~ir~~~~~~~~  297 (320)
                      |++++++++ ..++.+.+||..+.+.+..+ .+...+.+++|+|+|++|+++ +.+++|++||.+...
T Consensus       216 ~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~  282 (300)
T TIGR03866       216 KDGKTAFVALGPANRVAVVDAKTYEVLDYL-LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK  282 (300)
T ss_pred             CCCCEEEEEcCCCCeEEEEECCCCcEEEEE-EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence            999986554 45678999999877666544 345578999999999998876 569999999976543

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1539|consensus

Probab=99.92  E-value=2.7e-23  Score=186.47  Aligned_cols=296  Identities=22%  Similarity=0.320  Sum_probs=228.0

Q ss_pred             CeEeecccceeEEEEE-eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec-CCCC
Q psy14961          1 MIIWDGLTQTKEHSVT-MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP-NSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~-~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~   78 (320)
                      |.|||+++.+.+..+. .|...|....|.|....+++++.|+++++|-.+..+........-.+|..+-.|+.|- .++.
T Consensus       269 m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~  348 (910)
T KOG1539|consen  269 MAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGH  348 (910)
T ss_pred             EEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcE
Confidence            6799999988887665 6778899999999999999999999999998874443333444556898888888874 6678


Q ss_pred             EEEEEeCCCeEEEEECCC-------cc--------e-------------eeec---------------------------
Q psy14961         79 QILTGSGDCTCALWDVES-------SQ--------L-------------LQSF---------------------------  103 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~-------~~--------~-------------~~~~---------------------------  103 (320)
                      .+++++.|++.+.+++..       ++        .             +..+                           
T Consensus       349 ~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~  428 (910)
T KOG1539|consen  349 FILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWN  428 (910)
T ss_pred             EEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEe
Confidence            889999999888876521       00        0             0000                           


Q ss_pred             ----------ccCc----cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec---cCCcc-------------
Q psy14961        104 ----------HGHT----GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE---GHHNL-------------  153 (320)
Q Consensus       104 ----------~~~~----~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~---~~~~~-------------  153 (320)
                                ..+.    ..+.+.+++.+.-|++.+.|+..|.|-+||+.+|....+|-   .|...             
T Consensus       429 ~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~  508 (910)
T KOG1539|consen  429 FRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLL  508 (910)
T ss_pred             ccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceE
Confidence                      0011    22333444445678999999999999999999998777662   23222             


Q ss_pred             --ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEe
Q psy14961        154 --ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       154 --~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s  231 (320)
                        .+.+|.+++||.........+. -...+.++.++.....++.+..|-.|+++|..+.+.+..+..+..  .++++.||
T Consensus       509 vsa~~~Gilkfw~f~~k~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~n--ritd~~FS  585 (910)
T KOG1539|consen  509 VSAGADGILKFWDFKKKVLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGN--RITDMTFS  585 (910)
T ss_pred             EEccCcceEEEEecCCcceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccc--ceeeeEeC
Confidence              1358999999998877666554 345788899999888999999999999999998877766664433  46899999


Q ss_pred             cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC-CceEeeecchHhhhh
Q psy14961        232 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD-TTLRDEESKNRYVQY  300 (320)
Q Consensus       232 ~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D-~~ir~~~~~~~~~~~  300 (320)
                      |||++|++++.|++|++||+.++..+..+. -+.+..++.|||+|.+||++.-| .-|.+|..+..+.+-
T Consensus       586 ~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNkslF~~v  654 (910)
T KOG1539|consen  586 PDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKSLFKSV  654 (910)
T ss_pred             CCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEchhHheec
Confidence            999999999999999999999988876543 46788999999999999999998 669999976666553

>KOG0267|consensus

Probab=99.92  E-value=8.3e-26  Score=199.71  Aligned_cols=224  Identities=24%  Similarity=0.453  Sum_probs=188.4

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      ...+++....+-.+++|+.          +.+..|...+.|+..-.....+++|+.|..+.+|.+.....+..+.+|.++
T Consensus         3 ~~~~~m~~~~~t~Lr~~~~----------~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hesp   72 (825)
T KOG0267|consen    3 GMEFLMKTKRATKLRVWDT----------REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESP   72 (825)
T ss_pred             cccccceeeeeeccccccc----------hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCc
Confidence            3444555555666777764          235578888999887667788999999999999998877777789999999


Q ss_pred             eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC
Q psy14961        110 LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS  189 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~  189 (320)
                      |.++.|.+.  ..+|+.|+.+|.|++||+..++                           .+.++.+|...+.++.|+|.
T Consensus        73 IeSl~f~~~--E~LlaagsasgtiK~wDleeAk---------------------------~vrtLtgh~~~~~sv~f~P~  123 (825)
T KOG0267|consen   73 IESLTFDTS--ERLLAAGSASGTIKVWDLEEAK---------------------------IVRTLTGHLLNITSVDFHPY  123 (825)
T ss_pred             ceeeecCcc--hhhhcccccCCceeeeehhhhh---------------------------hhhhhhccccCcceeeeccc
Confidence            999998664  4688899999999999987543                           33456778889999999999


Q ss_pred             CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeE
Q psy14961        190 GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSC  269 (320)
Q Consensus       190 g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~  269 (320)
                      +.++|+|+.|+.+++||.+.......+..+.  ..+..+.|+|+|.+++.|++|.++++||...+....+|..|+..|..
T Consensus       124 ~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~--~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~s  201 (825)
T KOG0267|consen  124 GEFFASGSTDTDLKIWDIRKKGCSHTYKSHT--RVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQS  201 (825)
T ss_pred             eEEeccccccccceehhhhccCceeeecCCc--ceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccc
Confidence            9999999999999999998666665555532  34577899999999999999999999999888899999999999999


Q ss_pred             EEECcCCCeEEEecCCCceEeeecc
Q psy14961        270 LQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +.|+|..-+|++||.|+++|+|+.+
T Consensus       202 le~hp~e~Lla~Gs~d~tv~f~dle  226 (825)
T KOG0267|consen  202 LEFHPLEVLLAPGSSDRTVRFWDLE  226 (825)
T ss_pred             cccCchhhhhccCCCCceeeeeccc
Confidence            9999999999999999999999986

>KOG4283|consensus

Probab=99.92  E-value=3.6e-23  Score=165.71  Aligned_cols=274  Identities=20%  Similarity=0.349  Sum_probs=203.9

Q ss_pred             eCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccc-----------ccccccccccCeEEE-EecCCCCEEEEE
Q psy14961         17 MPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSA-----------KKKTVATHTSFISCC-IFPNSDQQILTG   83 (320)
Q Consensus        17 ~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~-----------~~~~~~~h~~~v~~~-~~~~~~~~l~s~   83 (320)
                      -|...|+++...+ .|.++++|+.||.|.+||+....+...           .+..-.+|.-.|..+ +|+-+...+.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            4667899999987 788999999999999999965431111           011123466666654 557777889999


Q ss_pred             eCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc--------
Q psy14961         84 SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI--------  154 (320)
Q Consensus        84 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~--------  154 (320)
                      +-|.++++||.++.+....|+ ..+.|++-+++|.... .++++|..|-.|++.|+.+|.+..++++|..-+        
T Consensus       121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~  199 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS  199 (397)
T ss_pred             cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence            999999999999988777666 5677888777765443 466678888899999999999999999987543        


Q ss_pred             --------cCCCeEEEEECcCC-eeeeeec--------------CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe
Q psy14961        155 --------TDDKLVNIWDMRTG-YCVQSFE--------------GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK  211 (320)
Q Consensus       155 --------~~d~~i~iwd~~~~-~~~~~~~--------------~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~  211 (320)
                              +.|+.|++||++.. .|...+.              .|.+.|+.++|..++.++++++.|..+++|+...++
T Consensus       200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~  279 (397)
T KOG4283|consen  200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR  279 (397)
T ss_pred             ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence                    36999999999864 3443332              466789999999999999999999999999987765


Q ss_pred             eEeE-Ee----cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        212 EVAC-YK----KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       212 ~~~~-~~----~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      .... +-    .....++.. +. +-+...++.--.++.+.++.+.++..++-+..|-..|.|.+|.|+=+.+.+|+.|+
T Consensus       280 ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~  357 (397)
T KOG4283|consen  280 NTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNG  357 (397)
T ss_pred             ccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCC
Confidence            4211 10    001111111 11 22233333333458899999999999999999988999999999988999999999


Q ss_pred             ceEeeec
Q psy14961        287 TLRDEES  293 (320)
Q Consensus       287 ~ir~~~~  293 (320)
                      .|..|--
T Consensus       358 ni~~w~p  364 (397)
T KOG4283|consen  358 NIYMWSP  364 (397)
T ss_pred             ccccccc
Confidence            9998873

>KOG0641|consensus

Probab=99.92  E-value=3.3e-22  Score=154.75  Aligned_cols=234  Identities=22%  Similarity=0.338  Sum_probs=180.9

Q ss_pred             ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC------c-----c----eeeecccCccceeEEEEeeCCCCCEEEEE
Q psy14961         63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVES------S-----Q----LLQSFHGHTGELMDLDLAPSETGNTFVSG  127 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~------~-----~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~  127 (320)
                      .-...|.++.|.|.|...+.|++..+.+|-....      +     +    ..+.-+.|++.|+|.+|+  +.|+++++|
T Consensus        30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws--~~geliatg  107 (350)
T KOG0641|consen   30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWS--PCGELIATG  107 (350)
T ss_pred             cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEec--CccCeEEec
Confidence            3456789999999999999999999999864321      1     1    112234688999999885  469999999


Q ss_pred             eCCCeEEEEeCCCCcEEE-----EeccCCccc--------------------cCCCeEEEEECcCCeeeeeecCCCCCeE
Q psy14961        128 SSDKLVNIWDMRTGYCVQ-----SFEGHHNLI--------------------TDDKLVNIWDMRTGYCVQSFEGHQSDVN  182 (320)
Q Consensus       128 ~~dg~i~lwd~~~~~~~~-----~~~~~~~~~--------------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~  182 (320)
                      +.|..|++.-.+...+..     .++-|...+                    ..|-.|++-|..+++..+.+.+|..-|.
T Consensus       108 sndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghil  187 (350)
T KOG0641|consen  108 SNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHIL  187 (350)
T ss_pred             CCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEE
Confidence            999999987665433211     122121111                    1345677778899999999999999887


Q ss_pred             EEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-----eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        183 SVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-----FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      ++ ++-+|-.+++|+.|.+|++||++-...+.........     -.+.++++.|.|++|++|-.|....+||+..++++
T Consensus       188 al-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~i  266 (350)
T KOG0641|consen  188 AL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMI  266 (350)
T ss_pred             EE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCcee
Confidence            55 5556889999999999999999876655443322111     23567889999999999999999999999999999


Q ss_pred             EEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        258 NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                      ..+-+|+..|.|+.|||...+|.++|+|..||+-|...-+..
T Consensus       267 q~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~  308 (350)
T KOG0641|consen  267 QRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH  308 (350)
T ss_pred             eeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh
Confidence            999999999999999999999999999999999997555444

>KOG0300|consensus

Probab=99.92  E-value=5.6e-24  Score=172.03  Aligned_cols=235  Identities=22%  Similarity=0.302  Sum_probs=181.1

Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ....+.+|...|+.+.-......+.+++.|.+.+||.+++++++..+.+|.+.|.+++|+++  +.++++++.|++-.+|
T Consensus       140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s--~~L~lTaSGD~taHIW  217 (481)
T KOG0300|consen  140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNS--GLLLLTASGDETAHIW  217 (481)
T ss_pred             ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccc--cceEEEccCCcchHHH
Confidence            34567899999998877665668889999999999999999999999999999999999764  7899999999999999


Q ss_pred             eCCCCcEE------EEeccCCccccC-------CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEE
Q psy14961        137 DMRTGYCV------QSFEGHHNLITD-------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCR  203 (320)
Q Consensus       137 d~~~~~~~------~~~~~~~~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~  203 (320)
                      ...-...+      ....+....-..       |+..+.=...-..++..+.+|...|.+..|-..|+.+++++.|.+..
T Consensus       218 ~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAn  297 (481)
T KOG0300|consen  218 KAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTAN  297 (481)
T ss_pred             HHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccce
Confidence            74221110      001000000000       11111100001236677899999999999999999999999999999


Q ss_pred             EEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-eEEEEeecCCCceeEEEECcCCCeEEEe
Q psy14961        204 LFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-CRVNHLMGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       204 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~-~~~~~~~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      +||+.+++.+.....+...  .+-+.-+|..+++++++.|-+.++||.... ..+..|.||.+.|+++.|+-|. .++||
T Consensus       298 lwDVEtge~v~~LtGHd~E--LtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSg  374 (481)
T KOG0300|consen  298 LWDVETGEVVNILTGHDSE--LTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSG  374 (481)
T ss_pred             eeeeccCceeccccCcchh--ccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeec
Confidence            9999999988766655432  245567899999999999999999997643 3456789999999999999875 47999


Q ss_pred             cCCCceEeeecchH
Q psy14961        283 SWDTTLRDEESKNR  296 (320)
Q Consensus       283 s~D~~ir~~~~~~~  296 (320)
                      |.|++|++||.+|+
T Consensus       375 SDDrTvKvWdLrNM  388 (481)
T KOG0300|consen  375 SDDRTVKVWDLRNM  388 (481)
T ss_pred             CCCceEEEeeeccc
Confidence            99999999998766

>KOG1332|consensus

Probab=99.92  E-value=1.7e-24  Score=168.95  Aligned_cols=210  Identities=23%  Similarity=0.307  Sum_probs=163.1

Q ss_pred             cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc---ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS---QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      ..|...|-.....--+.+|++++.|++|+|+.+.++   +++..+.+|.++|+.++++-..-|..|++++-||.|.+|.-
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence            356666666555556889999999999999998654   56788999999999999975557899999999999999998


Q ss_pred             CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCee-EeE
Q psy14961        139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKE-VAC  215 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~-~~~  215 (320)
                      .+++..                         .......|...|++++|.|.  |-.|++++.||.|.+.+.+.... ...
T Consensus        88 ~~g~w~-------------------------k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~  142 (299)
T KOG1332|consen   88 ENGRWT-------------------------KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTS  142 (299)
T ss_pred             CCCchh-------------------------hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccch
Confidence            776421                         12234468999999999996  45789999999999999876511 111


Q ss_pred             EecCcceeeeEEEEEecC---C-----------cEEEEEeCCCeEEEEcCCCC--eEEEEeecCCCceeEEEECcCC---
Q psy14961        216 YKKDSILFGATSVDFSVS---G-----------RLLFAGYNDYTINVWDSLKC--CRVNHLMGHENRVSCLQVSPDG---  276 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~---~-----------~~l~~g~~dg~v~~wd~~~~--~~~~~~~~h~~~i~~i~~s~~~---  276 (320)
                      ........+++++.+.|-   |           +.|++|+.|..|++|+..+.  ....+|.+|.+.|..+||.|.-   
T Consensus       143 ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~  222 (299)
T KOG1332|consen  143 KIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLP  222 (299)
T ss_pred             hhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCC
Confidence            111112246778888875   4           56999999999999986654  3345589999999999999963   


Q ss_pred             -CeEEEecCCCceEeeecchH
Q psy14961        277 -TAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       277 -~~l~s~s~D~~ir~~~~~~~  296 (320)
                       .+|||+|+||++-+|...+-
T Consensus       223 ~s~iAS~SqDg~viIwt~~~e  243 (299)
T KOG1332|consen  223 KSTIASCSQDGTVIIWTKDEE  243 (299)
T ss_pred             ceeeEEecCCCcEEEEEecCc
Confidence             46999999999999997544

>KOG0973|consensus

Probab=99.92  E-value=8e-23  Score=188.50  Aligned_cols=237  Identities=20%  Similarity=0.251  Sum_probs=186.5

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEeccc--------------CCcccccccccccccCeEEEEecCCCC
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--------------DDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~--------------~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .....|...|+|+.|+|||++||+|+.|+.|.||.....              -+.......+.+|...|..+.|+|++.
T Consensus        63 ~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~  142 (942)
T KOG0973|consen   63 CTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS  142 (942)
T ss_pred             eeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc
Confidence            345567789999999999999999999999999987620              011223456778999999999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc------
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN------  152 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~------  152 (320)
                      ++++++.|++|.||+..+...+..+++|.+.|..+.|  +|-|++|++-+.|++|++|+..+-.....+.++..      
T Consensus       143 ~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~--DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T  220 (942)
T KOG0973|consen  143 LLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSW--DPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTT  220 (942)
T ss_pred             EEEEecccceEEEEccccceeeeeeecccccccceEE--CCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcc
Confidence            9999999999999999999999999999999999888  45699999999999999999655333333322211      


Q ss_pred             --------------cc-----cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC------C-------C----EEEEe
Q psy14961        153 --------------LI-----TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS------G-------D----AVATG  196 (320)
Q Consensus       153 --------------~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~------g-------~----~l~s~  196 (320)
                                    ..     .....+.|.+-.+-+.-..+-||..++.++.|+|.      .       +    .+|+|
T Consensus       221 ~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg  300 (942)
T KOG0973|consen  221 FFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG  300 (942)
T ss_pred             eeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe
Confidence                          10     12345677766666667788899999999999982      1       1    57899


Q ss_pred             eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        197 SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       197 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      |.|++|.||.....+++.....- ....+..+.|+|||-.|++++.||+|.+....
T Consensus       301 SqDrSlSVW~T~~~RPl~vi~~l-f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fe  355 (942)
T KOG0973|consen  301 SQDRSLSVWNTALPRPLFVIHNL-FNKSIVDMSWSPDGFSLFACSLDGTVALIHFE  355 (942)
T ss_pred             cCCccEEEEecCCCCchhhhhhh-hcCceeeeeEcCCCCeEEEEecCCeEEEEEcc
Confidence            99999999998777776543321 11246789999999999999999999998643

>KOG1036|consensus

Probab=99.92  E-value=1.1e-22  Score=163.76  Aligned_cols=226  Identities=25%  Similarity=0.430  Sum_probs=165.4

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT   82 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s   82 (320)
                      ++|+..+.....+. +..++.+|+|.++ ..+++|+.||.|+.+|+.....     ..+..|..++.|+.+.+....+++
T Consensus        39 lYdv~~~~l~~~~~-~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~-----~~igth~~~i~ci~~~~~~~~vIs  111 (323)
T KOG1036|consen   39 LYDVPANSLKLKFK-HGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE-----DQIGTHDEGIRCIEYSYEVGCVIS  111 (323)
T ss_pred             EEeccchhhhhhee-cCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc-----eeeccCCCceEEEEeeccCCeEEE
Confidence            44444443333333 6678999999885 4789999999999999965332     356789999999999988889999


Q ss_pred             EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc---------------EEEEe
Q psy14961         83 GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY---------------CVQSF  147 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~---------------~~~~~  147 (320)
                      |+.|++|++||.........+. ....|.++.+    .|+.|+.|+.|..+.+||+++..               ++..+
T Consensus       112 gsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v----~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~  186 (323)
T KOG1036|consen  112 GSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDV----SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALV  186 (323)
T ss_pred             cccCccEEEEeccccccccccc-cCceEEEEec----cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEe
Confidence            9999999999998655555544 2346777654    47899999999999999998642               22233


Q ss_pred             ccCCccc--cCCCeEEEEECcCC----eeeeeecCCCC---------CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee
Q psy14961        148 EGHHNLI--TDDKLVNIWDMRTG----YCVQSFEGHQS---------DVNSVKFHPSGDAVATGSDDATCRLFDLRADKE  212 (320)
Q Consensus       148 ~~~~~~~--~~d~~i~iwd~~~~----~~~~~~~~~~~---------~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~  212 (320)
                      +.....+  +-+|.|.+=.+...    ..-..|+.|..         +|++|+|||-...||+|+.||.|.+||+.+.+.
T Consensus       187 pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKr  266 (323)
T KOG1036|consen  187 PNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKR  266 (323)
T ss_pred             cCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhh
Confidence            3111111  23666655433332    23344555532         799999999988999999999999999998887


Q ss_pred             EeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961        213 VACYKKDSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                      +..+.+..  ..+.+++|+.+|..||+|+.
T Consensus       267 l~q~~~~~--~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  267 LKQLAKYE--TSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             hhhccCCC--CceEEEEeccCCCeEEEEec
Confidence            76665542  24678999999999999974

>KOG4328|consensus

Probab=99.91  E-value=2.9e-22  Score=169.02  Aligned_cols=285  Identities=20%  Similarity=0.247  Sum_probs=197.5

Q ss_pred             ceeEEEEEeCccceEEEEEcCCC--CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeC
Q psy14961          9 QTKEHSVTMPATWVMACAYAPSG--SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSG   85 (320)
Q Consensus         9 ~~~~~~~~~~~~~V~~~~~~~~~--~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~   85 (320)
                      .........+...|++++|+|..  +++|+|...|.|-+||+..++.......-+..|..+|.++.|+| +...+++.+.
T Consensus       176 ~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSy  255 (498)
T KOG4328|consen  176 YRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSY  255 (498)
T ss_pred             ceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeecc
Confidence            33334455667899999999955  48899999999999999644443344445678999999999976 4578999999


Q ss_pred             CCeEEEEECCCcceeeecccCccc--eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-EEEeccCCc----------
Q psy14961         86 DCTCALWDVESSQLLQSFHGHTGE--LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-VQSFEGHHN----------  152 (320)
Q Consensus        86 dg~v~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-~~~~~~~~~----------  152 (320)
                      ||+|++-|++++.....+......  ...+.+.  .+...++.+..=|.+.+||++++.. ...+.-|..          
T Consensus       256 DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~--~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~  333 (498)
T KOG4328|consen  256 DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFS--AESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPV  333 (498)
T ss_pred             CceeeeeeecchhhHHHhhcCccceeeeecccc--CCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCC
Confidence            999999999876543333221222  2333332  2334566666666999999987653 111111111          


Q ss_pred             ------cccCCCeEEEEECcCCe----eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC----CCeeEeEEec
Q psy14961        153 ------LITDDKLVNIWDMRTGY----CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR----ADKEVACYKK  218 (320)
Q Consensus       153 ------~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~----~~~~~~~~~~  218 (320)
                            ..+-|++.+|||+|...    ++.....|...|+++.|||++..|++.+.|..|+|||..    ...+...+.+
T Consensus       334 ~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~H  413 (498)
T KOG4328|consen  334 CPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPH  413 (498)
T ss_pred             CchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeec
Confidence                  12458999999998632    234456799999999999998889999999999999973    2233333322


Q ss_pred             Ccc---eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeE-EEECcCCC-eEEEecCCCceEeee
Q psy14961        219 DSI---LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSC-LQVSPDGT-AFSSGSWDTTLRDEE  292 (320)
Q Consensus       219 ~~~---~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~-i~~s~~~~-~l~s~s~D~~ir~~~  292 (320)
                      ...   -...-.+.|.|+..++++|-.-..|-++|...++.+.++..... .|.+ +.|+|-+. +++-++.-|.|.+|.
T Consensus       414 n~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft  493 (498)
T KOG4328|consen  414 NNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFT  493 (498)
T ss_pred             cCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEe
Confidence            211   12234678999999999999888999999888877766544333 5544 48999877 455555778888887


Q ss_pred             cch
Q psy14961        293 SKN  295 (320)
Q Consensus       293 ~~~  295 (320)
                      .+.
T Consensus       494 ~k~  496 (498)
T KOG4328|consen  494 NKK  496 (498)
T ss_pred             cCC
Confidence            543

>KOG0264|consensus

Probab=99.91  E-value=6.5e-23  Score=172.80  Aligned_cols=226  Identities=17%  Similarity=0.300  Sum_probs=171.2

Q ss_pred             CeEeecccceeEE----------EEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCc---cccccccccccc
Q psy14961          1 MIIWDGLTQTKEH----------SVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDS---SAKKKTVATHTS   66 (320)
Q Consensus         1 ~~~W~~~~~~~~~----------~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~---~~~~~~~~~h~~   66 (320)
                      +.|||..+.....          .+..|..-=.++.|++... .|++|+.|+.|.+||+......   ......+.+|..
T Consensus       149 v~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~  228 (422)
T KOG0264|consen  149 VYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHED  228 (422)
T ss_pred             EEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCc
Confidence            3578766543221          3445554446788887544 8999999999999999754432   223445678999


Q ss_pred             CeEEEEecC-CCCEEEEEeCCCeEEEEECC--CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         67 FISCCIFPN-SDQQILTGSGDCTCALWDVE--SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        67 ~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      .|-.+.|.+ +...+.+++.|+.+.|||+.  +.++....++|.+++.+++|.|.. +..||+||.|++|+|||+|+.. 
T Consensus       229 ~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~-~~ilAT~S~D~tV~LwDlRnL~-  306 (422)
T KOG0264|consen  229 VVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFN-EFILATGSADKTVALWDLRNLN-  306 (422)
T ss_pred             ceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCC-CceEEeccCCCcEEEeechhcc-
Confidence            999999865 45677889999999999998  566667778999999999998874 6899999999999999998642 


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee----------
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE----------  212 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~----------  212 (320)
                                               +++.++++|...|.+|.|+|.. ..||+++.|+.+.+||+..-..          
T Consensus       307 -------------------------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dg  361 (422)
T KOG0264|consen  307 -------------------------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDG  361 (422)
T ss_pred             -------------------------cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccC
Confidence                                     2566788999999999999975 4679999999999999853211          


Q ss_pred             --EeEEecCcceeeeEEEEEecCCcE-EEEEeCCCeEEEEcCCC
Q psy14961        213 --VACYKKDSILFGATSVDFSVSGRL-LFAGYNDYTINVWDSLK  253 (320)
Q Consensus       213 --~~~~~~~~~~~~~~~~~~s~~~~~-l~~g~~dg~v~~wd~~~  253 (320)
                        -..|.+......+..+.|+|+... |++..+|+.+.||++..
T Consensus       362 ppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  362 PPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             CcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence              112333333345778899998875 56678999999998753

>KOG0305|consensus

Probab=99.91  E-value=4.2e-23  Score=180.98  Aligned_cols=204  Identities=24%  Similarity=0.428  Sum_probs=173.7

Q ss_pred             CeEeecccceeEEEEEe-CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTM-PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~-~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      +.|||+.+++....+.. |...|.+++|.  +..+.+|+.|+.|.++|+...+..   ...+.+|...|+.+.|++++.+
T Consensus       241 v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~---~~~~~~H~qeVCgLkws~d~~~  315 (484)
T KOG0305|consen  241 VQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHV---VSTLQGHRQEVCGLKWSPDGNQ  315 (484)
T ss_pred             EEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhh---hhhhhcccceeeeeEECCCCCe
Confidence            45999999998877777 88899999998  668999999999999998643221   2247889999999999999999


Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE--eCCCeEEEEeCCCCcEEEEecc--------
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG--SSDKLVNIWDMRTGYCVQSFEG--------  149 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~--~~dg~i~lwd~~~~~~~~~~~~--------  149 (320)
                      +++|+.|+.+.|||.....+...+..|...|..++|+|... ..||+|  +.|+.|++||..++..+.....        
T Consensus       316 lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~-~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~  394 (484)
T KOG0305|consen  316 LASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQS-GLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLI  394 (484)
T ss_pred             eccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCcc-CceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEE
Confidence            99999999999999988888888999999999999999864 588886  4699999999998876654322        


Q ss_pred             ----CCccc----cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        150 ----HHNLI----TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       150 ----~~~~~----~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                          +..++    ..+..|.+|+..+...+..+.+|...|..++++|+|..+++|+.|.++++|++-..
T Consensus       395 Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  395 WSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence                11222    24668999999999999999999999999999999999999999999999998654

>KOG0301|consensus

Probab=99.91  E-value=1.7e-22  Score=178.23  Aligned_cols=232  Identities=23%  Similarity=0.465  Sum_probs=182.8

Q ss_pred             eEeecccceeE--EEEEeCccceEE-EEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          2 IIWDGLTQTKE--HSVTMPATWVMA-CAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         2 ~~W~~~~~~~~--~~~~~~~~~V~~-~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      ++|+-......  +.+..|..++.. ++|.+ ++-.|++|++|..|.+|...    .......+.+|+..|+|+....++
T Consensus        38 ~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~----~~~P~~~LkgH~snVC~ls~~~~~  113 (745)
T KOG0301|consen   38 KVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS----QAEPLYTLKGHKSNVCSLSIGEDG  113 (745)
T ss_pred             eeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecC----CCCchhhhhccccceeeeecCCcC
Confidence            57876544433  334557777766 77774 66679999999999999875    234456788999999999876665


Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---  154 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---  154 (320)
                      . +++||.|.++++|-.  +++...+++|...|+.+...|.   +.+++||.|..|++|.-  +.++++|.+|...+   
T Consensus       114 ~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e---~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL  185 (745)
T KOG0301|consen  114 T-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPE---NTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGL  185 (745)
T ss_pred             c-eEecccccceEEecc--hhhhcccCCcchheeeeeecCC---CcEEeccCcceeeeccC--Cchhhhhccchhheeee
Confidence            5 999999999999964  5666678999999998876553   38999999999999975  66777787776543   


Q ss_pred             -----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        155 -----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       155 -----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                                 +.|+.|++|++ +++++....+|+.-|.+++..+++..++++++|++++||+..  +..+.+..+..  
T Consensus       186 ~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPtt--  260 (745)
T KOG0301|consen  186 AVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTT--  260 (745)
T ss_pred             EEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCcc--
Confidence                       46999999999 889999999999999999977778899999999999999876  44455544432  


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      .+.++.+-++|. +++|++||.|++|-.
T Consensus       261 siWsa~~L~NgD-Ivvg~SDG~VrVfT~  287 (745)
T KOG0301|consen  261 SIWSAKVLLNGD-IVVGGSDGRVRVFTV  287 (745)
T ss_pred             ceEEEEEeeCCC-EEEeccCceEEEEEe
Confidence            345666667775 678888999999954

>KOG0647|consensus

Probab=99.91  E-value=2.8e-22  Score=161.09  Aligned_cols=227  Identities=19%  Similarity=0.266  Sum_probs=163.8

Q ss_pred             cccCeEEEEecCC-CCEEEEEeCCCeEEEEECCC-ccee-eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961         64 HTSFISCCIFPNS-DQQILTGSGDCTCALWDVES-SQLL-QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT  140 (320)
Q Consensus        64 h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~  140 (320)
                      .+..|.++.|+|. ...+++++.|++||+|+++. +... .....|.+++.+++|  +.+|..+++|+.|+.+++||+.+
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~W--sddgskVf~g~~Dk~~k~wDL~S  103 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCW--SDDGSKVFSGGCDKQAKLWDLAS  103 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEE--ccCCceEEeeccCCceEEEEccC
Confidence            4577899999984 45566899999999999976 3433 345668999988877  55789999999999999999999


Q ss_pred             CcEEEEeccCCcc---------------c--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEE
Q psy14961        141 GYCVQSFEGHHNL---------------I--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCR  203 (320)
Q Consensus       141 ~~~~~~~~~~~~~---------------~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~  203 (320)
                      ++... +..|...               +  +=|++++.||+|...++.++. ..+.+.++..-  ...++.+..+..|.
T Consensus       104 ~Q~~~-v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~--~pm~vVata~r~i~  179 (347)
T KOG0647|consen  104 GQVSQ-VAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVL--YPMAVVATAERHIA  179 (347)
T ss_pred             CCeee-eeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhcc--CceeEEEecCCcEE
Confidence            86432 2222111               1  238889999999887777664 33455555443  34677788888999


Q ss_pred             EEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC--eEEEEeecCC---------CceeEEEE
Q psy14961        204 LFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC--CRVNHLMGHE---------NRVSCLQV  272 (320)
Q Consensus       204 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~--~~~~~~~~h~---------~~i~~i~~  272 (320)
                      +|+++.+............+...+++..++....|.|+-+|.+.+..+...  ..-.+|.=|.         -+|++|+|
T Consensus       180 vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~F  259 (347)
T KOG0647|consen  180 VYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAF  259 (347)
T ss_pred             EEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEe
Confidence            999976543322222222344677888888887799999999999876654  2233344343         26899999


Q ss_pred             CcCCCeEEEecCCCceEeeecchH
Q psy14961        273 SPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       273 s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +|.-..|+|+|.||++-+||+..+
T Consensus       260 hP~hgtlvTaGsDGtf~FWDkdar  283 (347)
T KOG0647|consen  260 HPVHGTLVTAGSDGTFSFWDKDAR  283 (347)
T ss_pred             ecccceEEEecCCceEEEecchhh
Confidence            998788999999999999996544

>KOG0321|consensus

Probab=99.91  E-value=2.1e-22  Score=176.09  Aligned_cols=269  Identities=20%  Similarity=0.290  Sum_probs=195.7

Q ss_pred             EEEEcC---CCCEEEEecCCCeEEEEEecccCCc--ccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         24 ACAYAP---SGSVVASGGLDNKVTVYAIALEDDS--SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        24 ~~~~~~---~~~~l~s~~~dg~i~v~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ++.|++   ...+|+.+..||.|.++|.......  .........|...|..+.|-+....|++++.|.++++||+++.+
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~  133 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR  133 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence            466765   3447888999999999987432222  12234556899999999998866789999999999999999988


Q ss_pred             eeee--cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-------EE------------------------
Q psy14961         99 LLQS--FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-------VQ------------------------  145 (320)
Q Consensus        99 ~~~~--~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-------~~------------------------  145 (320)
                      ++..  +.+|.+.|.+++|++. +...|++|+.||.|.|||++....       ..                        
T Consensus       134 l~G~~~~~GH~~SvkS~cf~~~-n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA  212 (720)
T KOG0321|consen  134 LVGGRLNLGHTGSVKSECFMPT-NPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA  212 (720)
T ss_pred             eecceeecccccccchhhhccC-CCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence            8765  8899999999999876 457899999999999999864320       00                        


Q ss_pred             ------------EeccCCccc---cCCCeEEEEECcCCeeeeee--------cCC---CCCeEEEEEcCCCCEEEEeeCC
Q psy14961        146 ------------SFEGHHNLI---TDDKLVNIWDMRTGYCVQSF--------EGH---QSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       146 ------------~~~~~~~~~---~~d~~i~iwd~~~~~~~~~~--------~~~---~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                                  .+.....++   ..|+.|++||++...+....        ..|   ...+.++.....|.+|.+.+.|
T Consensus       213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD  292 (720)
T KOG0321|consen  213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD  292 (720)
T ss_pred             ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence                        000111111   14899999999976544322        223   2357788888889998777779


Q ss_pred             CeEEEEECCCCe--eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe-EEEEeecCCCceeEEEECcC-
Q psy14961        200 ATCRLFDLRADK--EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-RVNHLMGHENRVSCLQVSPD-  275 (320)
Q Consensus       200 g~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~-~~~~~~~h~~~i~~i~~s~~-  275 (320)
                      +.|.+||+.+..  ++..+......---..-..+|++.++++|+.|....+|.+.+.. ....+.+|.-.|++++|.|- 
T Consensus       293 ~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~  372 (720)
T KOG0321|consen  293 NSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSA  372 (720)
T ss_pred             CcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecccc
Confidence            999999987543  22333222111001123368999999999999999999877643 34557899999999999983 


Q ss_pred             CCeEEEecCCCceEeeec
Q psy14961        276 GTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       276 ~~~l~s~s~D~~ir~~~~  293 (320)
                      -.-++++|.|.++++|++
T Consensus       373 ~t~v~TcSdD~~~kiW~l  390 (720)
T KOG0321|consen  373 TTPVATCSDDFRVKIWRL  390 (720)
T ss_pred             CCCceeeccCcceEEEec
Confidence            334788899999999997

>KOG1274|consensus

Probab=99.90  E-value=8.3e-22  Score=178.79  Aligned_cols=260  Identities=19%  Similarity=0.270  Sum_probs=192.8

Q ss_pred             CeEeecccc-eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQ-TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~-~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |++|+.... +.+.....+...|.+++  .++.++++|+.+++|.+|.++..+..    ..+....-++.+++++.+|.+
T Consensus        37 ir~~~~~sd~e~P~ti~~~g~~v~~ia--~~s~~f~~~s~~~tv~~y~fps~~~~----~iL~Rftlp~r~~~v~g~g~~  110 (933)
T KOG1274|consen   37 IRKWKTNSDEEEPETIDISGELVSSIA--CYSNHFLTGSEQNTVLRYKFPSGEED----TILARFTLPIRDLAVSGSGKM  110 (933)
T ss_pred             eEEeecCCcccCCchhhccCceeEEEe--ecccceEEeeccceEEEeeCCCCCcc----ceeeeeeccceEEEEecCCcE
Confidence            457776655 33333332556666654  45558999999999999988532221    123344578899999999999


Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCe
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKL  159 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~  159 (320)
                      ++.|+.|-.|++-+..+......+++|.++|.++.+.  |++++||+.+.||.|++||+.++.+..++.+-....     
T Consensus       111 iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~--p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n-----  183 (933)
T KOG1274|consen  111 IAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYD--PKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDN-----  183 (933)
T ss_pred             EEeecCceeEEEEeccccchheeecccCCceeeeeEc--CCCCEEEEEecCceEEEEEcccchhhhhcccCCccc-----
Confidence            9999999999999999888888899999999988885  468999999999999999999887665543221100     


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  239 (320)
                          +..          ....+..++|+|+|..|+..+.|+.|++|+....+....+...........+.|+|+|+|||+
T Consensus       184 ----~~~----------~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA  249 (933)
T KOG1274|consen  184 ----EFI----------LSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA  249 (933)
T ss_pred             ----ccc----------ccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee
Confidence                000          133467899999999999999999999999888877666654433333678899999999999


Q ss_pred             EeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961        240 GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      ++.+|.|.+||..+..+    ......|.+++|.|+...+-.-...|+.-+|
T Consensus       250 s~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~  297 (933)
T KOG1274|consen  250 STLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLITALGTLGVS  297 (933)
T ss_pred             eccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence            99999999999876222    1124579999999988776554444544443

>KOG1063|consensus

Probab=99.90  E-value=5.6e-22  Score=174.91  Aligned_cols=295  Identities=20%  Similarity=0.301  Sum_probs=203.8

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc---cccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS---AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .|++||+++.|+|.+..|++++.|.++.+|..+....-.   ....+..+.......+.|++++..+++-+.-|..++|.
T Consensus       265 GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWk  344 (764)
T KOG1063|consen  265 GHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWK  344 (764)
T ss_pred             CcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEe
Confidence            689999999999999999999999999999764211001   12233344455677888999999999999999999998


Q ss_pred             CCCc---ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-----------------cEEEEeccCCcc
Q psy14961         94 VESS---QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-----------------YCVQSFEGHHNL  153 (320)
Q Consensus        94 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-----------------~~~~~~~~~~~~  153 (320)
                      ....   .......+|.+.|.++++.|  .|++|++++.|-+-|++-....                 .|+...++...+
T Consensus       345 t~d~~~w~~~~~iSGH~~~V~dv~W~p--sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~F  422 (764)
T KOG1063|consen  345 TKDKTFWTQEPVISGHVDGVKDVDWDP--SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQF  422 (764)
T ss_pred             ccCccceeeccccccccccceeeeecC--CCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCcee
Confidence            3321   23344578999999999965  5899999999999888754311                 111111111111


Q ss_pred             cc--CCCeEEEEE-------------------------------------------CcCCe-------------------
Q psy14961        154 IT--DDKLVNIWD-------------------------------------------MRTGY-------------------  169 (320)
Q Consensus       154 ~~--~d~~i~iwd-------------------------------------------~~~~~-------------------  169 (320)
                      ++  +++.+++|+                                           ..++.                   
T Consensus       423 VSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~e  502 (764)
T KOG1063|consen  423 VSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTE  502 (764)
T ss_pred             eecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccC
Confidence            10  000111110                                           00000                   


Q ss_pred             --------------eeeeecCCCCCeEEEEEcCCCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961        170 --------------CVQSFEGHQSDVNSVKFHPSGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDF  230 (320)
Q Consensus       170 --------------~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  230 (320)
                                    .+..+-||.-+|.+++.+|+|+.+||++..     ..|++|+..+-........+.  ..++.++|
T Consensus       503 PP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs--LTVT~l~F  580 (764)
T KOG1063|consen  503 PPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHS--LTVTRLAF  580 (764)
T ss_pred             CChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccc--eEEEEEEE
Confidence                          022455899999999999999999999864     358999987655544444332  46789999


Q ss_pred             ecCCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhheeeeee
Q psy14961        231 SVSGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRI  306 (320)
Q Consensus       231 s~~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~  306 (320)
                      ||||++|++.+.|.++.+|.....    ......++|+--|++..|+|++++|||||.|+++++|...+--.+|..+  +
T Consensus       581 Spdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~--~  658 (764)
T KOG1063|consen  581 SPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISR--F  658 (764)
T ss_pred             CCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhh--h
Confidence            999999999999999999975432    1233467899999999999999999999999999999953322333332  2


Q ss_pred             ecCCcceEEEe
Q psy14961        307 TKPTQGLTVYF  317 (320)
Q Consensus       307 ~~~~~~~~~~~  317 (320)
                      +.++-+..|-+
T Consensus       659 a~~~~~~aVTA  669 (764)
T KOG1063|consen  659 ACLKFSLAVTA  669 (764)
T ss_pred             chhccCCceee
Confidence            45555554443

>KOG0639|consensus

Probab=99.90  E-value=7.8e-23  Score=174.36  Aligned_cols=243  Identities=19%  Similarity=0.331  Sum_probs=185.0

Q ss_pred             CeEeecccceeEE---EEE--eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          1 MIIWDGLTQTKEH---SVT--MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~~~~~~---~~~--~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      |+|||+.-+....   ++.  ...+++.+|.++|||.-|++|+.-.++.|||+.....  ..+.++.......+.++.++
T Consensus       442 VKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTp--rikaeltssapaCyALa~sp  519 (705)
T KOG0639|consen  442 VKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTP--RIKAELTSSAPACYALAISP  519 (705)
T ss_pred             EEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCc--chhhhcCCcchhhhhhhcCC
Confidence            5799988654332   222  2567999999999999999999999999999964322  22233433334556678899


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--  153 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--  153 (320)
                      +.+..+++..||.|.|||+.+..+++.|++|...+.|+.+  +.+|..|-+|+-|.+||.||++.++.+...+-...+  
T Consensus       520 DakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdi--s~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfS  597 (705)
T KOG0639|consen  520 DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI--SKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFS  597 (705)
T ss_pred             ccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEe--cCCCceeecCCCccceeehhhhhhhhhhhhhhhhhhee
Confidence            9999999999999999999999999999999999999987  457999999999999999999988755432211111  


Q ss_pred             ------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc
Q psy14961        154 ------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       154 ------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~  221 (320)
                                  ..+.+.+.+... ++.....+..|..-|.++.|.+.|+++++.+.|+-+..|...-+..++..+... 
T Consensus       598 Lg~cP~~dWlavGMens~vevlh~-skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~S-  675 (705)
T KOG0639|consen  598 LGYCPTGDWLAVGMENSNVEVLHT-SKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-  675 (705)
T ss_pred             cccCCCccceeeecccCcEEEEec-CCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccC-
Confidence                        012334443332 223344566688899999999999999999999999999988777665443332 


Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                        .+.++++|.|.++++||+.|....+|.+
T Consensus       676 --sVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  676 --SVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             --cceeeeeccCceEEEecCCCcceEEEEE
Confidence              3578999999999999999988888753

>KOG4378|consensus

Probab=99.90  E-value=2.5e-22  Score=171.08  Aligned_cols=267  Identities=16%  Similarity=0.202  Sum_probs=193.3

Q ss_pred             CeEeecccce----eEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          1 MIIWDGLTQT----KEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~~~----~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      ++|||...-+    +.+ .+ ++-.+.++.|..... .+++.+.|..+++|.-+.+...........+.  .-.|+....
T Consensus        14 ~kl~D~s~~~~~~~~~~-~t-~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s   89 (673)
T KOG4378|consen   14 TKLSDFSDLETKSEYVH-QT-AEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACAS   89 (673)
T ss_pred             eEEeecccccCcccccc-CC-CCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhh
Confidence            4688865322    222 22 233488888987764 33444567788888654321111111112222  223444434


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-----------EE
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-----------CV  144 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-----------~~  144 (320)
                      ...++++|+..+.|+|||+....+.+.++.|.+.|.++.+..  ...+|++++..|.|.+..+.++.           .+
T Consensus        90 ~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~--~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsv  167 (673)
T KOG4378|consen   90 QSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNN--TDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSV  167 (673)
T ss_pred             cceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecC--CcceeEEeccCCcEEEEecccCccccceecCCCCeE
Confidence            446899999999999999997777788899999999988754  45799999999999999987654           33


Q ss_pred             EEecc------CCccccCCCeEEEEECcCCeeeeee-cCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        145 QSFEG------HHNLITDDKLVNIWDMRTGYCVQSF-EGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       145 ~~~~~------~~~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                      +.++-      +-..++++|.|.+||+....+...+ +.|..+...|+|+|.. ..|++.+.|+.|.+||.+..+...+.
T Consensus       168 Rll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l  247 (673)
T KOG4378|consen  168 RLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRL  247 (673)
T ss_pred             EEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccccee
Confidence            22211      1123468999999999887776554 6799999999999965 46799999999999999876655544


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeecCCCceeEEEECcCC
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMGHENRVSCLQVSPDG  276 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~  276 (320)
                      ....   ..++++|+++|.+|+.|...|.|..||++. ..++..+.+|...|++|+|-|..
T Consensus       248 ~y~~---Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  248 TYSH---PLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             eecC---CcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence            4332   247899999999999999999999999875 46788899999999999998864

>KOG0269|consensus

Probab=99.90  E-value=9.2e-23  Score=181.81  Aligned_cols=248  Identities=21%  Similarity=0.317  Sum_probs=181.0

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEec-CCCCEEEEEeCCCeEEEEECCC-
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFP-NSDQQILTGSGDCTCALWDVES-   96 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~-   96 (320)
                      ..++...++-..|+.+|+ ..+++|.+..................   ....++|. -..++|++++..|.|.+||+.. 
T Consensus        42 ~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~  120 (839)
T KOG0269|consen   42 ANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKS  120 (839)
T ss_pred             cceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCcc
Confidence            356777788888888875 56888887543322222111111111   12235564 3457899999999999999987 


Q ss_pred             --cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         97 --SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        97 --~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                        ++.+..|..|...+.+++|++. ..+.|++|++||.|++||++......++                           
T Consensus       121 ~rnk~l~~f~EH~Rs~~~ldfh~t-ep~iliSGSQDg~vK~~DlR~~~S~~t~---------------------------  172 (839)
T KOG0269|consen  121 IRNKLLTVFNEHERSANKLDFHST-EPNILISGSQDGTVKCWDLRSKKSKSTF---------------------------  172 (839)
T ss_pred             ccchhhhHhhhhccceeeeeeccC-CccEEEecCCCceEEEEeeecccccccc---------------------------
Confidence              5667788999999999999865 3579999999999999999876554433                           


Q ss_pred             cCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        175 EGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      .+....|..++|+|. +.+|+++.+.|.+.+||++.... ...+..+.  ..+..+.|+|++.+||||+.|++|+|||+.
T Consensus       173 ~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~--GpV~c~nwhPnr~~lATGGRDK~vkiWd~t  250 (839)
T KOG0269|consen  173 RSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHN--GPVLCLNWHPNREWLATGGRDKMVKIWDMT  250 (839)
T ss_pred             cccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhccc--CceEEEeecCCCceeeecCCCccEEEEecc
Confidence            234457889999994 67899999999999999986542 11122222  235678999999999999999999999987


Q ss_pred             CCeEEEEe-ecCCCceeEEEECcC-CCeEEEec--CCCceEeeecchHhhhh
Q psy14961        253 KCCRVNHL-MGHENRVSCLQVSPD-GTAFSSGS--WDTTLRDEESKNRYVQY  300 (320)
Q Consensus       253 ~~~~~~~~-~~h~~~i~~i~~s~~-~~~l~s~s--~D~~ir~~~~~~~~~~~  300 (320)
                      ..+.-... ..-..+|.+++|-|. ...||+++  .|-.|++||.+-+|.-|
T Consensus       251 ~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~  302 (839)
T KOG0269|consen  251 DSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPY  302 (839)
T ss_pred             CCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccc
Confidence            54332212 233568999999995 45688887  58889999998887754

>KOG1273|consensus

Probab=99.90  E-value=2.9e-21  Score=156.21  Aligned_cols=265  Identities=16%  Similarity=0.236  Sum_probs=198.0

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ  101 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  101 (320)
                      -.+|.|++.|.+||.|+.||.+-|||+....    ..+.+.+|..+|+|+.|+++|.+|+++++|..|.+||+..+.+++
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~----iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~  101 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR----IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLK  101 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccc----hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCcee
Confidence            5799999999999999999999999986432    345678999999999999999999999999999999999999888


Q ss_pred             ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE-------------E---EeccCCcc---ccCCCeEEE
Q psy14961        102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV-------------Q---SFEGHHNL---ITDDKLVNI  162 (320)
Q Consensus       102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~-------------~---~~~~~~~~---~~~d~~i~i  162 (320)
                      .+. ..++|+...++|......+++--.. .-.+-++..+...             .   .+..+.+.   .+..|.+.+
T Consensus       102 rir-f~spv~~~q~hp~k~n~~va~~~~~-sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv  179 (405)
T KOG1273|consen  102 RIR-FDSPVWGAQWHPRKRNKCVATIMEE-SPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLV  179 (405)
T ss_pred             EEE-ccCccceeeeccccCCeEEEEEecC-CcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEE
Confidence            776 5788999999988654444443322 2222232211110             0   12222222   245788999


Q ss_pred             EECcCCeeeeeecCCC-CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC----e--eEe-EEecCcc--eeeeEEEEEec
Q psy14961        163 WDMRTGYCVQSFEGHQ-SDVNSVKFHPSGDAVATGSDDATCRLFDLRAD----K--EVA-CYKKDSI--LFGATSVDFSV  232 (320)
Q Consensus       163 wd~~~~~~~~~~~~~~-~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~----~--~~~-~~~~~~~--~~~~~~~~~s~  232 (320)
                      +|..+.+++..++--. ..|..+.++..|+.|+.-+.|..|+.|++..-    +  ++. .++....  ...-..+.||.
T Consensus       180 ~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~  259 (405)
T KOG1273|consen  180 YDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSG  259 (405)
T ss_pred             EecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecC
Confidence            9999999988876555 67899999999999999999999999987521    1  110 0000000  01124678999


Q ss_pred             CCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCC-CceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        233 SGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHE-NRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       233 ~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~-~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +|.|+..|+ ....+.+|....+..++.+.|.. .....+.|+|-...++|- ..|.+++|..
T Consensus       260 dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~  321 (405)
T KOG1273|consen  260 DGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAV  321 (405)
T ss_pred             CccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEe
Confidence            999998887 34579999999999998888777 467899999987778877 6699999984

>KOG2096|consensus

Probab=99.90  E-value=4.8e-22  Score=160.91  Aligned_cols=221  Identities=19%  Similarity=0.248  Sum_probs=155.1

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----eee-ecccCccceeEEEEeeCCCCCEEEEEeCCC
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----LLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDK  131 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg  131 (320)
                      ...+.+|...|+++.|+.+|++|++++.|++|++|++....     +++ .++  -+--..+.|+|+-. ..+++.-...
T Consensus        79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve--~dhpT~V~FapDc~-s~vv~~~~g~  155 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVE--YDHPTRVVFAPDCK-SVVVSVKRGN  155 (420)
T ss_pred             hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhcccc--CCCceEEEECCCcc-eEEEEEccCC
Confidence            34678999999999999999999999999999999987532     111 111  11234456665432 2444444555


Q ss_pred             eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe
Q psy14961        132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK  211 (320)
Q Consensus       132 ~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~  211 (320)
                      .+++|.+....     ++..     .-...-||-     ...-+-|+.+|-++-...++.++++++.|..|.+|+++ ++
T Consensus       156 ~l~vyk~~K~~-----dG~~-----~~~~v~~D~-----~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq  219 (420)
T KOG2096|consen  156 KLCVYKLVKKT-----DGSG-----SHHFVHIDN-----LEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQ  219 (420)
T ss_pred             EEEEEEeeecc-----cCCC-----Ccccccccc-----cccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cc
Confidence            67787653211     0000     000001221     01112366677778888889999999999999999998 66


Q ss_pred             eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC--------CCeEEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961        212 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL--------KCCRVNHLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~--------~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      .+..+...  ......++.||+|+++++++-.-.|++|..-        .-.++.++.||...|..++|||+++.++|.|
T Consensus       220 ~L~~idtn--q~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS  297 (420)
T KOG2096|consen  220 LLQSIDTN--QSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS  297 (420)
T ss_pred             eeeeeccc--cccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe
Confidence            65544322  2234567899999999999988899999732        2235677899999999999999999999999


Q ss_pred             CCCceEeeecchHhhh
Q psy14961        284 WDTTLRDEESKNRYVQ  299 (320)
Q Consensus       284 ~D~~ir~~~~~~~~~~  299 (320)
                      .||++|+||+.-+|..
T Consensus       298 kDG~wriwdtdVrY~~  313 (420)
T KOG2096|consen  298 KDGKWRIWDTDVRYEA  313 (420)
T ss_pred             cCCcEEEeeccceEec
Confidence            9999999998777763

>KOG0302|consensus

Probab=99.90  E-value=2.8e-22  Score=165.41  Aligned_cols=206  Identities=22%  Similarity=0.374  Sum_probs=157.6

Q ss_pred             ccccCeEEEEecCCC--CEEEEEeCCCeEEEEECCC----------------cceeeecccCccceeEEEEeeCCCCCEE
Q psy14961         63 THTSFISCCIFPNSD--QQILTGSGDCTCALWDVES----------------SQLLQSFHGHTGELMDLDLAPSETGNTF  124 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~--~~l~s~~~dg~v~iwd~~~----------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l  124 (320)
                      .|.+.+..+.-.+-+  .+.++-+..|.|+||++..                .+++..+.+|+..-+.++|+|...| .|
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g-~L  227 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG-RL  227 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc-cc
Confidence            455555555544433  3455556789999999732                2467778889998899999887665 57


Q ss_pred             EEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEE
Q psy14961        125 VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCR  203 (320)
Q Consensus       125 ~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~  203 (320)
                      ++|..-+.|++|...+|.....                        ...+.+|...|-.++|||..+ .|+|||.||+|+
T Consensus       228 lsGDc~~~I~lw~~~~g~W~vd------------------------~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIr  283 (440)
T KOG0302|consen  228 LSGDCVKGIHLWEPSTGSWKVD------------------------QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIR  283 (440)
T ss_pred             ccCccccceEeeeeccCceeec------------------------CccccccccchhhhccCCccCceEEeeecCceEE
Confidence            8888788899998776643211                        123456999999999999754 679999999999


Q ss_pred             EEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC---CeEEEEeecCCCceeEEEECc-CCCeE
Q psy14961        204 LFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK---CCRVNHLMGHENRVSCLQVSP-DGTAF  279 (320)
Q Consensus       204 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~---~~~~~~~~~h~~~i~~i~~s~-~~~~l  279 (320)
                      |||++.+....+.........+..+.|+..-.+||+|+.||+++|||++.   +.++.++..|..+|++|.|+| +...|
T Consensus       284 IWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~i  363 (440)
T KOG0302|consen  284 IWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVI  363 (440)
T ss_pred             EEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceE
Confidence            99999874432222222223567889999888999999999999999764   567889999999999999999 56789


Q ss_pred             EEecCCCceEeeec
Q psy14961        280 SSGSWDTTLRDEES  293 (320)
Q Consensus       280 ~s~s~D~~ir~~~~  293 (320)
                      +++|.|.+|-+||+
T Consensus       364 aasg~D~QitiWDl  377 (440)
T KOG0302|consen  364 AASGEDNQITIWDL  377 (440)
T ss_pred             EeccCCCcEEEEEe
Confidence            99999999999995

>KOG2919|consensus

Probab=99.90  E-value=1.8e-21  Score=157.87  Aligned_cols=268  Identities=19%  Similarity=0.321  Sum_probs=189.1

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc--------cccccccc-ccCeE-EEEe------cCCCCEEE
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA--------KKKTVATH-TSFIS-CCIF------PNSDQQIL   81 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~--------~~~~~~~h-~~~v~-~~~~------~~~~~~l~   81 (320)
                      +.++...|.|+|||+-|++-+.|..+.+|++..+.....        ...++... ...|. ++++      .|+..+++
T Consensus        48 p~nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a  127 (406)
T KOG2919|consen   48 PLNFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFA  127 (406)
T ss_pred             chhhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceee
Confidence            556778899999999999999999999999864322211        00111111 12333 3444      35567889


Q ss_pred             EEeCCCeEEEEECCCcceeeeccc--Ccccee-EEEEeeCCCCCEEEEEeCCCeEEEEeC-CCCcEE-------------
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHG--HTGELM-DLDLAPSETGNTFVSGSSDKLVNIWDM-RTGYCV-------------  144 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~--~~~~v~-~~~~~~~~~~~~l~s~~~dg~i~lwd~-~~~~~~-------------  144 (320)
                      +.+++.-|++||.-++++...+.+  |..++. +.++.+++||.+|++|. .+.|+++|+ +.|+-.             
T Consensus       128 ~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq  206 (406)
T KOG2919|consen  128 VSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQ  206 (406)
T ss_pred             eccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccc
Confidence            999999999999999988776654  333332 23445577899988775 578999998 554311             


Q ss_pred             ----E--EeccCCc----cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeE
Q psy14961        145 ----Q--SFEGHHN----LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEV  213 (320)
Q Consensus       145 ----~--~~~~~~~----~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~  213 (320)
                          .  ++.++..    .-+....+-+|.-..+.+++.+.+|...|+.++|+++|+.|.+|++ |-.|..||++..+..
T Consensus       207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p  286 (406)
T KOG2919|consen  207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP  286 (406)
T ss_pred             cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch
Confidence                1  1122211    1123456677777778889999999999999999999999999986 778999999865432


Q ss_pred             -eEEecCcc-eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        214 -ACYKKDSI-LFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       214 -~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                       -....+.. ...-.-....|++++|++|+.+|.|++||+.. +..+..+..|++.++.++++|-=.++|++|-.+
T Consensus       287 v~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr  362 (406)
T KOG2919|consen  287 VYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQR  362 (406)
T ss_pred             hhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCce
Confidence             11111111 00112345569999999999999999999887 566777888999999999999988899988543

>KOG4283|consensus

Probab=99.89  E-value=1.6e-21  Score=156.31  Aligned_cols=199  Identities=25%  Similarity=0.341  Sum_probs=152.8

Q ss_pred             cccccCeEEEEec-CCCCEEEEEeCCCeEEEEECCCcc------------e---eeecccCccceeEEEEeeCCCCCEEE
Q psy14961         62 ATHTSFISCCIFP-NSDQQILTGSGDCTCALWDVESSQ------------L---LQSFHGHTGELMDLDLAPSETGNTFV  125 (320)
Q Consensus        62 ~~h~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~------------~---~~~~~~~~~~v~~~~~~~~~~~~~l~  125 (320)
                      ..|.+.|.++... ..++++++|+.||.|.+||+++..            +   .+.-.+|+-.|..+.|-|...| .|.
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtG-mFt  118 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTG-MFT  118 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCc-eee
Confidence            4577888888774 467899999999999999996532            1   0112357777888888887554 899


Q ss_pred             EEeCCCeEEEEeCCCCcEEEEeccCCc-----------------cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        126 SGSSDKLVNIWDMRTGYCVQSFEGHHN-----------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       126 s~~~dg~i~lwd~~~~~~~~~~~~~~~-----------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      +++-|..+++||.++.+....|.-...                 ..+.+-.|++-|+.+|.+..++.||...|.++.|+|
T Consensus       119 ssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp  198 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSP  198 (397)
T ss_pred             cccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEecc
Confidence            999999999999999876665532111                 113577899999999999999999999999999999


Q ss_pred             CCCE-EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC---CeEEEEeecCC
Q psy14961        189 SGDA-VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK---CCRVNHLMGHE  264 (320)
Q Consensus       189 ~g~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~---~~~~~~~~~h~  264 (320)
                      ..++ |++|+.||.|++||++....                                ..++-|..+   ...+.+-.+|.
T Consensus       199 ~~e~vLatgsaDg~irlWDiRrasg--------------------------------cf~~lD~hn~k~~p~~~~n~ah~  246 (397)
T KOG4283|consen  199 SSEWVLATGSADGAIRLWDIRRASG--------------------------------CFRVLDQHNTKRPPILKTNTAHY  246 (397)
T ss_pred             CceeEEEecCCCceEEEEEeecccc--------------------------------eeEEeecccCccCcccccccccc
Confidence            8876 58999999999999975310                                111111111   11122346799


Q ss_pred             CceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        265 NRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       265 ~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +.|+.++|+.|+.++++++.|..+|+|++
T Consensus       247 gkvngla~tSd~~~l~~~gtd~r~r~wn~  275 (397)
T KOG4283|consen  247 GKVNGLAWTSDARYLASCGTDDRIRVWNM  275 (397)
T ss_pred             ceeeeeeecccchhhhhccCccceEEeec
Confidence            99999999999999999999999999996

>KOG0294|consensus

Probab=99.89  E-value=8.3e-21  Score=153.49  Aligned_cols=226  Identities=19%  Similarity=0.323  Sum_probs=172.1

Q ss_pred             EEEecCCCeEEEEEecccCC----ccc----ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeeccc
Q psy14961         34 VASGGLDNKVTVYAIALEDD----SSA----KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG  105 (320)
Q Consensus        34 l~s~~~dg~i~v~~~~~~~~----~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  105 (320)
                      |+.|+....|.=+++..+..    ...    ..-.+..|.+++++++.+  +.++++|+.|-+|+|||+.+...+..+..
T Consensus         4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~   81 (362)
T KOG0294|consen    4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLS   81 (362)
T ss_pred             EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceec
Confidence            56677766666666653321    000    111345789999999884  67999999999999999999888888888


Q ss_pred             CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEE
Q psy14961        106 HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVK  185 (320)
Q Consensus       106 ~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~  185 (320)
                      |.+.++++.|.+....+.|++|+.||.|.+|+...=                           .++.++++|...|+.++
T Consensus        82 HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W---------------------------~~~~slK~H~~~Vt~ls  134 (362)
T KOG0294|consen   82 HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW---------------------------ELLKSLKAHKGQVTDLS  134 (362)
T ss_pred             cccceEEEEecCCcchhheeeecCCCcEEEEEcCCe---------------------------EEeeeecccccccceeE
Confidence            999999999876544458999999999999986432                           35566788999999999


Q ss_pred             EcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC
Q psy14961        186 FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN  265 (320)
Q Consensus       186 ~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~  265 (320)
                      .||.|+.-++.+.|+.+++||+-.++.-.......   ..+.+.|+|.|.+++.+..+ .|-+|.+.+......+. ...
T Consensus       135 iHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~---~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~-~~~  209 (362)
T KOG0294|consen  135 IHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKN---KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIE-NPK  209 (362)
T ss_pred             ecCCCceEEEEcCCceeeeehhhcCccceeeccCC---cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhh-ccc
Confidence            99999999999999999999998887654433222   13558999999999888866 58899876654433322 224


Q ss_pred             ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        266 RVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       266 ~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+.++.|- ++..|++|+.|+.|++||..
T Consensus       210 r~l~~~~l-~~~~L~vG~d~~~i~~~D~d  237 (362)
T KOG0294|consen  210 RILCATFL-DGSELLVGGDNEWISLKDTD  237 (362)
T ss_pred             cceeeeec-CCceEEEecCCceEEEeccC
Confidence            56677764 46688999999999999964

>KOG0303|consensus

Probab=99.89  E-value=8.9e-21  Score=157.49  Aligned_cols=226  Identities=23%  Similarity=0.350  Sum_probs=175.6

Q ss_pred             ccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCc-------ceeeecccCccceeEEEEeeCCCCCEEEEEeCC
Q psy14961         59 KTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESS-------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD  130 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d  130 (320)
                      ....+|.++|..+.|.| +++.|++|++|.+|.||++..+       +++..+.+|...|--+.++|.. .+.|++++.|
T Consensus        75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA-~NVLlsag~D  153 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA-PNVLLSAGSD  153 (472)
T ss_pred             CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc-hhhHhhccCC
Confidence            34678999999999865 5578999999999999998543       4567788999999999999875 4789999999


Q ss_pred             CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        131 KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       131 g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                      ..|.+||+.+|..+.+                           +. |..-|.+++|+.+|.+|++.+.|+.|+|||.+++
T Consensus       154 n~v~iWnv~tgeali~---------------------------l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~  205 (472)
T KOG0303|consen  154 NTVSIWNVGTGEALIT---------------------------LD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRG  205 (472)
T ss_pred             ceEEEEeccCCceeee---------------------------cC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCC
Confidence            9999999887764432                           23 8888999999999999999999999999999999


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEe---CCCeEEEEcCCCCeE---EEEeecCCCceeEEEECcCCCeEEEec-
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGY---NDYTINVWDSLKCCR---VNHLMGHENRVSCLQVSPDGTAFSSGS-  283 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---~dg~v~~wd~~~~~~---~~~~~~h~~~i~~i~~s~~~~~l~s~s-  283 (320)
                      +.+..-..+. ......+.|-.+|.++.||.   ++.++.+||..+...   ..++. -++.|.--=|.||.+++.-+| 
T Consensus       206 ~~v~e~~~he-G~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GK  283 (472)
T KOG0303|consen  206 TVVSEGVAHE-GAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGK  283 (472)
T ss_pred             cEeeeccccc-CCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEec
Confidence            8776542221 22345677888999888886   578999999654321   22333 355666667788888876655 


Q ss_pred             CCCceEeee--cchHhhhheeeeeeecCCcceEE
Q psy14961        284 WDTTLRDEE--SKNRYVQYLLRSRITKPTQGLTV  315 (320)
Q Consensus       284 ~D~~ir~~~--~~~~~~~~~~~~~~~~~~~~~~~  315 (320)
                      .|+.||-++  .+.+|+.|+..=++.+|++|+-+
T Consensus       284 GD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~  317 (472)
T KOG0303|consen  284 GDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGF  317 (472)
T ss_pred             CCcceEEEEecCCCceeEEecccccCCccccccc
Confidence            699999888  46678898887788888888743

>KOG1063|consensus

Probab=99.89  E-value=2e-20  Score=165.16  Aligned_cols=289  Identities=19%  Similarity=0.271  Sum_probs=194.4

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCC---EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGS---VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~---~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |.+||..+..-...+..|...|+++.+-|..+   ++++|+.|+.+.+|.+.  .+.......+.+|...+.|+.  ...
T Consensus        36 Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~--~~~~~~i~~~~g~~~~~~cv~--a~~  111 (764)
T KOG1063|consen   36 IAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLR--DEYLIKIYTIQGHCKECVCVV--ARS  111 (764)
T ss_pred             EEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEe--ehheEEEEeecCcceeEEEEE--eee
Confidence            45788887755566678899999999998887   89999999999999986  223344556667776666653  222


Q ss_pred             CEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEE--EeeCCCCCEEEEEeCCCeEEEEeCCCC--cEEEEeccCC
Q psy14961         78 QQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLD--LAPSETGNTFVSGSSDKLVNIWDMRTG--YCVQSFEGHH  151 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~--~~~~~~~~~l~s~~~dg~i~lwd~~~~--~~~~~~~~~~  151 (320)
                      ....+.+.|+++.+||.+..+  ++..+.--.+.+..++  +.+.++--.++.|+.+..|.++.-...  +.+..+.||.
T Consensus       112 ~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~  191 (764)
T KOG1063|consen  112 SVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHT  191 (764)
T ss_pred             eEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccc
Confidence            223333689999999985544  2222222222222233  333222223445666666767654432  2344555554


Q ss_pred             ccc------------------cCCCeEEEEECcCCe---------------------ee----------eeecCCCCCeE
Q psy14961        152 NLI------------------TDDKLVNIWDMRTGY---------------------CV----------QSFEGHQSDVN  182 (320)
Q Consensus       152 ~~~------------------~~d~~i~iwd~~~~~---------------------~~----------~~~~~~~~~v~  182 (320)
                      ..+                  +.|..|++|.+.-..                     ..          ..+.||.+.|.
T Consensus       192 DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~  271 (764)
T KOG1063|consen  192 DWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVY  271 (764)
T ss_pred             hhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceE
Confidence            332                  346778888543211                     11          12359999999


Q ss_pred             EEEEcCCCCEEEEeeCCCeEEEEECCCCeeE-----eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC---C
Q psy14961        183 SVKFHPSGDAVATGSDDATCRLFDLRADKEV-----ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK---C  254 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~---~  254 (320)
                      ++.|+|.+..|+++|.|+++.+|......-+     ..-.......+...+-|+|++..+++-+..|-.++|....   .
T Consensus       272 sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w  351 (764)
T KOG1063|consen  272 SVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFW  351 (764)
T ss_pred             EEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccce
Confidence            9999999989999999999999987654221     1111111122345678999999999999999999997322   2


Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+.....||.+.|..|+|+|.|.+|.|+|.|.|-|++..
T Consensus       352 ~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~  390 (764)
T KOG1063|consen  352 TQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFAR  390 (764)
T ss_pred             eeccccccccccceeeeecCCCCEEEEeccccceeeecc
Confidence            334446799999999999999999999999999998774

>KOG0270|consensus

Probab=99.88  E-value=1.2e-21  Score=164.75  Aligned_cols=227  Identities=21%  Similarity=0.335  Sum_probs=167.3

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCccc-----------------ccccccccccCeEEEEecCC-CCEEEEEeCCCeEEE
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSA-----------------KKKTVATHTSFISCCIFPNS-DQQILTGSGDCTCAL   91 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~-----------------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~i   91 (320)
                      .|+|+|.|..|-.|.|||++..+.-..                 ......+|...|.++.|... ...|++||.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            568999999999999999874322100                 01112367777777776543 357899999999999


Q ss_pred             EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE---E---------EEeccCCc----ccc
Q psy14961         92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---V---------QSFEGHHN----LIT  155 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---~---------~~~~~~~~----~~~  155 (320)
                      ||+.++++...+..|.++|.++.|++. .+..|++|+.|+++.+.|++...+   .         ..+..+..    .-+
T Consensus       271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~-~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~t  349 (463)
T KOG0270|consen  271 WDVDTGKPKSSITHHGKKVQTLEWHPY-EPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVST  349 (463)
T ss_pred             EEcCCCCcceehhhcCCceeEEEecCC-CceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEec
Confidence            999999999999999999999999986 468999999999999999984211   1         11222211    125


Q ss_pred             CCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        156 DDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       156 ~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      +||.++-+|+|.. +++.+++.|..+|.++++++.- ..+++++.|+.+++|++....+.....+........++++.|+
T Consensus       350 ddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~  429 (463)
T KOG0270|consen  350 DDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPD  429 (463)
T ss_pred             CCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCC
Confidence            7999999999984 8999999999999999999864 4678999999999999875444322222211111234455555


Q ss_pred             Cc-EEEEEeCCCeEEEEcCCCCeEE
Q psy14961        234 GR-LLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       234 ~~-~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      -. .+|.|+..+.+++||..+...+
T Consensus       430 ~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  430 VAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             cceEEEecCccceEEEeecccChhH
Confidence            43 6788888989999998765443

>KOG1408|consensus

Probab=99.88  E-value=2.4e-20  Score=165.38  Aligned_cols=267  Identities=19%  Similarity=0.256  Sum_probs=191.7

Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-----------CCCEEEEEeCCCeEEE
Q psy14961         23 MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-----------SDQQILTGSGDCTCAL   91 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----------~~~~l~s~~~dg~v~i   91 (320)
                      -+|.|++....|...-.|.++.|||+.... +..+...+..|..-|+.+..-|           ...-+.+++.|++||+
T Consensus       328 IA~~Fdet~~klscVYndhSlYvWDvrD~~-kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRl  406 (1080)
T KOG1408|consen  328 IACQFDETTDKLSCVYNDHSLYVWDVRDVN-KVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRL  406 (1080)
T ss_pred             eEEEecCCCceEEEEEcCceEEEEeccccc-cccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEE
Confidence            478899999999999999999999985322 2233344556766666554211           1235889999999999


Q ss_pred             EECCCc---ce----------eee---------c---------------ccCccceeEEEEeeCCCCCEEEEEeCCCeEE
Q psy14961         92 WDVESS---QL----------LQS---------F---------------HGHTGELMDLDLAPSETGNTFVSGSSDKLVN  134 (320)
Q Consensus        92 wd~~~~---~~----------~~~---------~---------------~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~  134 (320)
                      ||++.+   ..          +..         +               ......+.++++  +|+|+.|++|..-|.++
T Consensus       407 W~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~v--Sp~gqhLAsGDr~Gnlr  484 (1080)
T KOG1408|consen  407 WDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAV--SPDGQHLASGDRGGNLR  484 (1080)
T ss_pred             eecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEE--CCCcceecccCccCceE
Confidence            998652   11          000         0               011234455555  66899999999999999


Q ss_pred             EEeCCCCcEEEEeccCCc------------------cccCCCeEEEEECcC-CeeeeeecCCCCCeEEEEEcCCC--CEE
Q psy14961        135 IWDMRTGYCVQSFEGHHN------------------LITDDKLVNIWDMRT-GYCVQSFEGHQSDVNSVKFHPSG--DAV  193 (320)
Q Consensus       135 lwd~~~~~~~~~~~~~~~------------------~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~p~g--~~l  193 (320)
                      +|++.........+.|..                  ..+.|..|++||... -.+++++.+|...|+++.|--+|  ..+
T Consensus       485 Vy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~M  564 (1080)
T KOG1408|consen  485 VYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKM  564 (1080)
T ss_pred             EEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEE
Confidence            999976543322222221                  124588999999865 45788899999999999998877  678


Q ss_pred             EEeeCCCeEEEEECCCCeeEeEEecCc---ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec---CCCce
Q psy14961        194 ATGSDDATCRLFDLRADKEVACYKKDS---ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG---HENRV  267 (320)
Q Consensus       194 ~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~---h~~~i  267 (320)
                      ++++.|+.|++=-.+.......+..+.   .......+++.|..+++++++.|..|+|||+.+++..+.|++   |++..
T Consensus       565 iscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~l  644 (1080)
T KOG1408|consen  565 ISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDL  644 (1080)
T ss_pred             EeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCce
Confidence            999999987653322111111222221   112356789999999999999999999999999999888874   66667


Q ss_pred             eEEEECcCCCeEEEecCCCceEeee
Q psy14961        268 SCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       268 ~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      -.+...|.|.|||+...|+++-++|
T Consensus       645 IKv~lDPSgiY~atScsdktl~~~D  669 (1080)
T KOG1408|consen  645 IKVILDPSGIYLATSCSDKTLCFVD  669 (1080)
T ss_pred             EEEEECCCccEEEEeecCCceEEEE
Confidence            7888899999999999999999999

>KOG1445|consensus

Probab=99.88  E-value=4.4e-21  Score=167.98  Aligned_cols=127  Identities=19%  Similarity=0.328  Sum_probs=99.3

Q ss_pred             eEEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCc-c-cccccccccccCeEEEEecCCCCEEEEEeCCC
Q psy14961         11 KEHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDS-S-AKKKTVATHTSFISCCIFPNSDQQILTGSGDC   87 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~-~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg   87 (320)
                      .+..+..|.+.|+.+.|+| +..+||+|+.|..++||.+...-.. . .....+.+..-.|-|+.|.+...-|+..+..|
T Consensus        71 ~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g  150 (1012)
T KOG1445|consen   71 DIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHG  150 (1012)
T ss_pred             ccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCc
Confidence            4455678899999999998 5569999999999999998632111 0 11112223345577889977665666666789


Q ss_pred             eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      ++.|||+.+++.+..+.+|...|.+..|  +.||..|++++.|..|++||.+
T Consensus       151 ~v~i~D~stqk~~~el~~h~d~vQSa~W--seDG~llatscKdkqirifDPR  200 (1012)
T KOG1445|consen  151 SVYITDISTQKTAVELSGHTDKVQSADW--SEDGKLLATSCKDKQIRIFDPR  200 (1012)
T ss_pred             eEEEEEcccCceeecccCCchhhhcccc--ccCCceEeeecCCcceEEeCCc
Confidence            9999999999999999999999988877  5689999999999999999965

>KOG2106|consensus

Probab=99.87  E-value=4.2e-19  Score=151.82  Aligned_cols=249  Identities=21%  Similarity=0.289  Sum_probs=188.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |.||+.-+.+.......|+..|.+++...+|.+|- |++|+.|..||-+   .......++....+.+..+.-...+  |
T Consensus       269 i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~---y~k~r~~elPe~~G~iRtv~e~~~d--i  342 (626)
T KOG2106|consen  269 ILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDN---YRKLRETELPEQFGPIRTVAEGKGD--I  342 (626)
T ss_pred             EEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEecccc---ccccccccCchhcCCeeEEecCCCc--E
Confidence            46899877766656668999999999999997655 9999999999832   2333344566677888877654332  7


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      +.|...+.|--=.++++-. ....+|..+.+.++.+|+  .+++++++.|+.+++|+  ..+..                
T Consensus       343 ~vGTtrN~iL~Gt~~~~f~-~~v~gh~delwgla~hps--~~q~~T~gqdk~v~lW~--~~k~~----------------  401 (626)
T KOG2106|consen  343 LVGTTRNFILQGTLENGFT-LTVQGHGDELWGLATHPS--KNQLLTCGQDKHVRLWN--DHKLE----------------  401 (626)
T ss_pred             EEeeccceEEEeeecCCce-EEEEecccceeeEEcCCC--hhheeeccCcceEEEcc--CCcee----------------
Confidence            7777666776666665433 334578889999988776  46899999999999998  22222                


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                        |...          -..++.|++|+|.| .+|.|...|...+.|..+...+..... ..  .++.++|+|+|.+||.|
T Consensus       402 --wt~~----------~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~--~ls~v~ysp~G~~lAvg  465 (626)
T KOG2106|consen  402 --WTKI----------IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NE--QLSVVRYSPDGAFLAVG  465 (626)
T ss_pred             --EEEE----------ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CC--ceEEEEEcCCCCEEEEe
Confidence              2111          23467899999999 899999999999999988666555444 33  35789999999999999


Q ss_pred             eCCCeEEEEcCCC-CeEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        241 YNDYTINVWDSLK-CCRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       241 ~~dg~v~~wd~~~-~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +.|+.|.+|-... ++.+.... -|..+|+.+.||+|+++|.+-|-|-.|-.|.
T Consensus       466 s~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~  519 (626)
T KOG2106|consen  466 SHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK  519 (626)
T ss_pred             cCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence            9999999997543 34433332 2347999999999999999999999999994

>KOG1034|consensus

Probab=99.87  E-value=5.5e-21  Score=155.30  Aligned_cols=267  Identities=18%  Similarity=0.256  Sum_probs=185.2

Q ss_pred             CccceEEEEEcC---C-CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEeCCCeEEEE
Q psy14961         18 PATWVMACAYAP---S-GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGSGDCTCALW   92 (320)
Q Consensus        18 ~~~~V~~~~~~~---~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iw   92 (320)
                      +++....|+|+-   + ..+++.||.-|.|+|.|+.    +.+....+.+|...|..+.+.|. .+++++++.|..||+|
T Consensus        88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~----~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlw  163 (385)
T KOG1034|consen   88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVV----SGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLW  163 (385)
T ss_pred             CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecc----hhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEE
Confidence            334445666653   2 4588999999999999975    33455678899999999999665 4789999999999999


Q ss_pred             ECCCcceeeec---ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEE-ECcCC
Q psy14961         93 DVESSQLLQSF---HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIW-DMRTG  168 (320)
Q Consensus        93 d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iw-d~~~~  168 (320)
                      ++++..++..+   .+|.+.|.++.|+.  +|.+++|++.|-+|++|++...+....++..... +++++-+-+ .....
T Consensus       164 nI~~~~Cv~VfGG~egHrdeVLSvD~~~--~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~-~~~~t~~pfpt~~~~  240 (385)
T KOG1034|consen  164 NIQTDVCVAVFGGVEGHRDEVLSVDFSL--DGDRIASCGMDHSLKLWRLNVKEFKNKLELSITY-SPNKTTRPFPTPKTH  240 (385)
T ss_pred             eccCCeEEEEecccccccCcEEEEEEcC--CCCeeeccCCcceEEEEecChhHHhhhhhhhccc-CCCCccCcCCccccc
Confidence            99999888765   57899998888854  6889999999999999999854322211111000 111110000 00000


Q ss_pred             eeee-eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC-Cee-------------EeEEecCcceeeeEEEEEecC
Q psy14961        169 YCVQ-SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA-DKE-------------VACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       169 ~~~~-~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~-------------~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      .+.. +-.-|...|.|+.|-  |++++|-|-++.|..|-.-. .+.             +..+.-..........+|.|-
T Consensus       241 fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~  318 (385)
T KOG1034|consen  241 FPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPW  318 (385)
T ss_pred             cccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHH
Confidence            1111 224488889999998  68999999999999997621 111             011111110011234667788


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCeE--EEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCCR--VNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~~--~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +++||.|...|.|.+||+....+  ..++..+  ...|...+||-||..|+....|++|.-||-
T Consensus       319 ~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr  382 (385)
T KOG1034|consen  319 QKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR  382 (385)
T ss_pred             HHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence            99999999999999999887655  2333322  457999999999999999999999999984

>KOG2445|consensus

Probab=99.87  E-value=6.9e-20  Score=147.78  Aligned_cols=216  Identities=22%  Similarity=0.342  Sum_probs=161.5

Q ss_pred             cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ..|...|.++.|...|.++++++.|++|+|||.+.    -.+....+.|.+.|..+.+++..-|+.+|+++.|+++.+|.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            46889999999999999999999999999999643    24566788999999999999888899999999999999997


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      -..    ..++.+         -+-|-     ...++..-...|..+.|.|.  |-.||+++.||.+|||+......+..
T Consensus        90 E~~----~~~~~~---------~~~Wv-----~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~  151 (361)
T KOG2445|consen   90 EQE----KSEEAH---------GRRWV-----RRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQ  151 (361)
T ss_pred             ecc----cccccc---------cceeE-----EEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcccccc
Confidence            531    111111         11121     22345556678999999995  66789999999999998765433322


Q ss_pred             Ee-----------cCcceeeeEEEEEecC---CcEEEEEeCC-----CeEEEEcCCC----CeEEEEeecCCCceeEEEE
Q psy14961        216 YK-----------KDSILFGATSVDFSVS---GRLLFAGYND-----YTINVWDSLK----CCRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       216 ~~-----------~~~~~~~~~~~~~s~~---~~~l~~g~~d-----g~v~~wd~~~----~~~~~~~~~h~~~i~~i~~  272 (320)
                      ..           .........++.|+|.   ..+||+|+.+     +.+.||....    ...+.++.+|.++|..|+|
T Consensus       152 W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~w  231 (361)
T KOG2445|consen  152 WTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISW  231 (361)
T ss_pred             chhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeee
Confidence            21           1111123456777763   5688998865     5788986433    3456778899999999999


Q ss_pred             CcC-C---CeEEEecCCCceEeeecchH
Q psy14961        273 SPD-G---TAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       273 s~~-~---~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .|+ |   .+||+|+.|| ||+|..+..
T Consensus       232 APn~Gr~y~~lAvA~kDg-v~I~~v~~~  258 (361)
T KOG2445|consen  232 APNIGRSYHLLAVATKDG-VRIFKVKVA  258 (361)
T ss_pred             ccccCCceeeEEEeecCc-EEEEEEeec
Confidence            996 3   3699999999 999998654

>KOG0302|consensus

Probab=99.87  E-value=4.7e-20  Score=152.37  Aligned_cols=245  Identities=24%  Similarity=0.310  Sum_probs=176.8

Q ss_pred             CccceEEEEEcCCC--CEEEEecCCCeEEEEEeccc-----CC-------cccccccccccccCeEEEEecCC-CCEEEE
Q psy14961         18 PATWVMACAYAPSG--SVVASGGLDNKVTVYAIALE-----DD-------SSAKKKTVATHTSFISCCIFPNS-DQQILT   82 (320)
Q Consensus        18 ~~~~V~~~~~~~~~--~~l~s~~~dg~i~v~~~~~~-----~~-------~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s   82 (320)
                      |...++.+.-++-+  .+.++=+..|.++||++...     +.       .....-+..+|...=+.+.|++- ...|++
T Consensus       150 h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Lls  229 (440)
T KOG0302|consen  150 HYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLS  229 (440)
T ss_pred             cccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccccc
Confidence            34455556555544  45566677899999998521     00       01112244567777788899873 356888


Q ss_pred             EeCCCeEEEEECCCccee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCe
Q psy14961         83 GSGDCTCALWDVESSQLL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKL  159 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~  159 (320)
                      |.--+.|++|.+.++.-.   ..+.+|...|..++++|..+ ..|+|||.||+|+|||++.+....              
T Consensus       230 GDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~-~vfaScS~DgsIrIWDiRs~~~~~--------------  294 (440)
T KOG0302|consen  230 GDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTED-GVFASCSCDGSIRIWDIRSGPKKA--------------  294 (440)
T ss_pred             CccccceEeeeeccCceeecCccccccccchhhhccCCccC-ceEEeeecCceEEEEEecCCCccc--------------
Confidence            888899999998876532   34567999999999998865 589999999999999999874211              


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC---CeeEeEEecCcceeeeEEEEEecCC-c
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA---DKEVACYKKDSILFGATSVDFSVSG-R  235 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~s~~~-~  235 (320)
                                ++. .+.|...|+.|+|+..-..||+|+.||+++|||+++   ++++..|+.+..  .++++.|+|.. +
T Consensus       295 ----------~~~-~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~--pItsieW~p~e~s  361 (440)
T KOG0302|consen  295 ----------AVS-TKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKA--PITSIEWHPHEDS  361 (440)
T ss_pred             ----------eeE-eeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccC--CeeEEEeccccCc
Confidence                      122 267999999999999888999999999999999975   455666766654  47899999864 5


Q ss_pred             EEEEEeCCCeEEEEcCCCCeE--------E--------EEeecC--CCceeEEEECcC-CCeEEEecCCCceEe
Q psy14961        236 LLFAGYNDYTINVWDSLKCCR--------V--------NHLMGH--ENRVSCLQVSPD-GTAFSSGSWDTTLRD  290 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~--------~--------~~~~~h--~~~i~~i~~s~~-~~~l~s~s~D~~ir~  290 (320)
                      .+++++.|.+|.+||+..-.-        .        .-+.-|  ...|..+.|++. .-+|+|.+.||.--+
T Consensus       362 ~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVf  435 (440)
T KOG0302|consen  362 VIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVF  435 (440)
T ss_pred             eEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEE
Confidence            778888999999999642100        0        012234  347899999984 558899888886443

>KOG0322|consensus

Probab=99.86  E-value=3.2e-21  Score=152.33  Aligned_cols=229  Identities=19%  Similarity=0.268  Sum_probs=175.8

Q ss_pred             ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         61 VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      +.+|.+.|+|+.|..++ +|++|..-|.|++|++++.+....++ .+...+..+...|   +..+.+-+.|+.+.+|++.
T Consensus        10 LRp~~~~v~s~~fqa~~-rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p---~d~l~tqgRd~~L~lw~ia   85 (323)
T KOG0322|consen   10 LRPHSSSVTSVLFQANE-RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIP---NDSLDTQGRDPLLILWTIA   85 (323)
T ss_pred             eccccchheehhhccch-hhhcccccceEEEEEeecCccchhhhhhccceeeceeecC---CcchhhcCCCceEEEEEcc
Confidence            45788999999998755 69999999999999999998887777 4555666665444   3578888999999999987


Q ss_pred             CCc--------------EEEEeccCC---------------c------------cc------------------------
Q psy14961        140 TGY--------------CVQSFEGHH---------------N------------LI------------------------  154 (320)
Q Consensus       140 ~~~--------------~~~~~~~~~---------------~------------~~------------------------  154 (320)
                      .+.              |..++....               .            .+                        
T Consensus        86 ~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~  165 (323)
T KOG0322|consen   86 YSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGST  165 (323)
T ss_pred             CcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccce
Confidence            532              111110000               0            00                        


Q ss_pred             ------cCCCeEEEEECcCCeeee----------eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE--
Q psy14961        155 ------TDDKLVNIWDMRTGYCVQ----------SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY--  216 (320)
Q Consensus       155 ------~~d~~i~iwd~~~~~~~~----------~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~--  216 (320)
                            .+++.+.+||+.++..+.          ....|..+|.++.|.+.-+.=++|+.+..+..|.++.......+  
T Consensus       166 ~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~  245 (323)
T KOG0322|consen  166 FLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRK  245 (323)
T ss_pred             EEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccc
Confidence                  136789999998874333          33458889999999987777788999999999998654221111  


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .......++..+.+-||++.+|+++-|+.|++|..++..++..+..|.+.|++++|+||..++|.||.|++|-+|+.
T Consensus       246 e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  246 EITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             eEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            11112245677889999999999999999999999999999999999999999999999999999999999999974

>KOG2055|consensus

Probab=99.86  E-value=6.4e-20  Score=155.16  Aligned_cols=242  Identities=17%  Similarity=0.292  Sum_probs=188.2

Q ss_pred             ecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEE
Q psy14961          5 DGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILT   82 (320)
Q Consensus         5 ~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s   82 (320)
                      |+.++..+++..+...++.++.|+|+|. .+++++.......||+....  ..+.....++. ..+.....++++++|+.
T Consensus       243 DGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak--~~k~~~~~g~e~~~~e~FeVShd~~fia~  320 (514)
T KOG2055|consen  243 DGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK--VTKLKPPYGVEEKSMERFEVSHDSNFIAI  320 (514)
T ss_pred             cCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc--cccccCCCCcccchhheeEecCCCCeEEE
Confidence            5566667778888888999999999999 99999999999999985322  22233333443 33445566889999999


Q ss_pred             EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc---------
Q psy14961         83 GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL---------  153 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~---------  153 (320)
                      .+..|.|.+-...+++.+..++ ..+.|..++|.  ++++.|++++.+|.|.+||++...++..+.....+         
T Consensus       321 ~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fs--Sdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~  397 (514)
T KOG2055|consen  321 AGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFS--SDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISL  397 (514)
T ss_pred             cccCceEEeehhhhhhhhheee-eccEEeeEEEe--cCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecC
Confidence            9999999999999998887776 46777777775  67899999999999999999998888776432211         


Q ss_pred             -------ccCCCeEEEEECcC------CeeeeeecCCCCCeEEEEEcCCCCEEEEeeC--CCeEEEEECCCCeeEeEEec
Q psy14961        154 -------ITDDKLVNIWDMRT------GYCVQSFEGHQSDVNSVKFHPSGDAVATGSD--DATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       154 -------~~~d~~i~iwd~~~------~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~--dg~i~iwd~~~~~~~~~~~~  218 (320)
                             .++.|.|.|||..+      .+++..+......|++++|+|+...||.||.  +..+++..+.+......++.
T Consensus       398 ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~  477 (514)
T KOG2055|consen  398 NGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPT  477 (514)
T ss_pred             CCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCC
Confidence                   13578899998543      4567777778889999999999999987774  66899999887655444443


Q ss_pred             Cc-ceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        219 DS-ILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       219 ~~-~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      .. .+.-+++++|||.|.+||.|..+|.|.+|.+
T Consensus       478 ~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL  511 (514)
T KOG2055|consen  478 SNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL  511 (514)
T ss_pred             CCCcccceEEEEecCCCceEEeecCCCceeeEee
Confidence            32 2234789999999999999999999999964

>KOG0650|consensus

Probab=99.86  E-value=1e-19  Score=158.44  Aligned_cols=270  Identities=21%  Similarity=0.221  Sum_probs=191.7

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE-EEEEeCCCeEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ-ILTGSGDCTCALW   92 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~dg~v~iw   92 (320)
                      -+..|...|.++..+|.|.+|++|+.||+++||.+...    .+.... .-.+.|.|++|.+.+.. +++.+..+.+.|-
T Consensus       395 vyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~Tg----Rcvr~~-~~d~~I~~vaw~P~~~~~vLAvA~~~~~~iv  469 (733)
T KOG0650|consen  395 VYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATG----RCVRTV-QFDSEIRSVAWNPLSDLCVLAVAVGECVLIV  469 (733)
T ss_pred             eEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecc----eEEEEE-eecceeEEEEecCCCCceeEEEEecCceEEe
Confidence            45678999999999999999999999999999998532    222222 23468999999876542 3333334445555


Q ss_pred             ECCCc---------ce----------------------------eeecccCccceeEEEEeeCCCCCEEEEEeCC---Ce
Q psy14961         93 DVESS---------QL----------------------------LQSFHGHTGELMDLDLAPSETGNTFVSGSSD---KL  132 (320)
Q Consensus        93 d~~~~---------~~----------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d---g~  132 (320)
                      +..-|         .+                            +...-.|...|.++.|+  ..|.+|++..-+   ..
T Consensus       470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWH--rkGDYlatV~~~~~~~~  547 (733)
T KOG0650|consen  470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWH--RKGDYLATVMPDSGNKS  547 (733)
T ss_pred             CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeee--cCCceEEEeccCCCcce
Confidence            43221         00                            00111255667777775  468999987664   46


Q ss_pred             EEEEeCCCCcEEEE------------ecc--CCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        133 VNIWDMRTGYCVQS------------FEG--HHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       133 i~lwd~~~~~~~~~------------~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      |.|.++.......-            |.+  +.-++.....|++||+..+..+..+......|.+++.||.|+.|+.++.
T Consensus       548 VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~  627 (733)
T KOG0650|consen  548 VLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSY  627 (733)
T ss_pred             EEEEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecC
Confidence            88888754332221            221  1223456778999999888777777767778999999999999999999


Q ss_pred             CCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc------CCC---CeEEEEeecCCC---
Q psy14961        199 DATCRLFDLRADK-EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD------SLK---CCRVNHLMGHEN---  265 (320)
Q Consensus       199 dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd------~~~---~~~~~~~~~h~~---  265 (320)
                      |+.+..+|+.-+. +......+..  .+++++|++.-.++++|+.||++.++.      +..   -.++..+.+|..   
T Consensus       628 d~k~~WfDldlsskPyk~lr~H~~--avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~  705 (733)
T KOG0650|consen  628 DKKMCWFDLDLSSKPYKTLRLHEK--AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTND  705 (733)
T ss_pred             CCeeEEEEcccCcchhHHhhhhhh--hhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecc
Confidence            9999999987542 2222222222  357899999999999999999999874      211   235667788864   


Q ss_pred             -ceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        266 -RVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       266 -~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                       .|....|+|...+|+|++.|++||+|.
T Consensus       706 ~gVLd~~wHP~qpWLfsAGAd~tirlfT  733 (733)
T KOG0650|consen  706 LGVLDTIWHPRQPWLFSAGADGTIRLFT  733 (733)
T ss_pred             cceEeecccCCCceEEecCCCceEEeeC
Confidence             499999999999999999999999983

>KOG1273|consensus

Probab=99.85  E-value=1.8e-19  Score=145.92  Aligned_cols=199  Identities=18%  Similarity=0.283  Sum_probs=155.8

Q ss_pred             eEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961         68 ISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~  147 (320)
                      ..|+.|++-|.+|+.|..||.|.|||..|...-+.+.+|..+|.+++|  +++|.+|+++|.|..|++||+..|.+++.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~W--S~dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCW--SRDGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEe--cCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence            679999999999999999999999999999888888999999999988  557999999999999999999888765443


Q ss_pred             ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEeEEecCcc---ee
Q psy14961        148 EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVACYKKDSI---LF  223 (320)
Q Consensus       148 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---~~  223 (320)
                      .                            ..++|..+.|+|... .+++.-.+..-.+.++..++.. ..+....   ..
T Consensus       104 r----------------------------f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp~d~d~dln~  154 (405)
T KOG1273|consen  104 R----------------------------FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLPKDDDGDLNS  154 (405)
T ss_pred             E----------------------------ccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee-eccCCCcccccc
Confidence            2                            345788899998643 3344434444555555543221 1111111   11


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-CceeEEEECcCCCeEEEecCCCceEeeecchHh
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-NRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRY  297 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~  297 (320)
                      ......|.+.|+++++|...|.+.++|..+.+.+..+.--+ ..|..|-|+-.|+.|+.-+.|+.||.++.+.-.
T Consensus       155 sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~  229 (405)
T KOG1273|consen  155 SASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDID  229 (405)
T ss_pred             ccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhc
Confidence            12234589999999999999999999999888888776555 789999999999999999999999999976443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.85  E-value=4.2e-18  Score=146.31  Aligned_cols=226  Identities=14%  Similarity=0.161  Sum_probs=155.3

Q ss_pred             CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE-EEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI-LTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      +..+++++.|+.+++||+...    .....+..+. .+.++.|+++++.+ ++++.++.|++||+.+++.+..+..+.. 
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~----~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-   74 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATL----EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-   74 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCC----ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-
Confidence            357889999999999997532    2223344343 35678899988876 4667789999999998887776654433 


Q ss_pred             eeEEEEeeCCCCCEEEEE-eCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        110 LMDLDLAPSETGNTFVSG-SSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      +..+.+  +++++.++++ +.++.+++||+.+++.+..+.                            +...+.+++|+|
T Consensus        75 ~~~~~~--~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~----------------------------~~~~~~~~~~~~  124 (300)
T TIGR03866        75 PELFAL--HPNGKILYIANEDDNLVTVIDIETRKVLAEIP----------------------------VGVEPEGMAVSP  124 (300)
T ss_pred             ccEEEE--CCCCCEEEEEcCCCCeEEEEECCCCeEEeEee----------------------------CCCCcceEEECC
Confidence            344544  5567766554 567889999987654433221                            112356799999


Q ss_pred             CCCEEEEeeCCC-eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCCeEEEEeecCC--
Q psy14961        189 SGDAVATGSDDA-TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKCCRVNHLMGHE--  264 (320)
Q Consensus       189 ~g~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~~~~~~~~h~--  264 (320)
                      +|+.+++++.++ .+.+||..+++.........   ....+.|+|++++|+++ ..++.|.+||..++..+..+..+.  
T Consensus       125 dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~  201 (300)
T TIGR03866       125 DGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQ---RPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPG  201 (300)
T ss_pred             CCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCC---CccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccc
Confidence            999999888765 56778988766543332211   23568899999988655 468999999998877665553221  


Q ss_pred             ---C--ceeEEEECcCCCeEEE-ecCCCceEeeecch
Q psy14961        265 ---N--RVSCLQVSPDGTAFSS-GSWDTTLRDEESKN  295 (320)
Q Consensus       265 ---~--~i~~i~~s~~~~~l~s-~s~D~~ir~~~~~~  295 (320)
                         .  ....++|+|++++++. .+.+.++.+|+.+.
T Consensus       202 ~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~  238 (300)
T TIGR03866       202 VHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT  238 (300)
T ss_pred             cccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC
Confidence               1  2357899999998544 45567899999743

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1009|consensus

Probab=99.85  E-value=2e-19  Score=150.00  Aligned_cols=272  Identities=15%  Similarity=0.231  Sum_probs=171.8

Q ss_pred             ccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcc-----cccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         19 ATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSS-----AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        19 ~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ...|..+.|.++.. .++||+.|..|++|.+.......     .-...+..|...|.++.|+++|+.+++|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            46889999998776 99999999999999986543322     2234677899999999999999999999999999999


Q ss_pred             ECC--------C--------cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc--
Q psy14961         93 DVE--------S--------SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI--  154 (320)
Q Consensus        93 d~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~--  154 (320)
                      ...        +        -...+.+.+|..+++.++|++  ++.++++++.|..+++||+..|+....+..|...+  
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~--d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqg  170 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP--DSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQG  170 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccC--CCceeeeeeccceEEEEEeccceeEeeccccccccce
Confidence            765        2        112345677889999888855  67899999999999999999999888877765432  


Q ss_pred             -------------cCCCeEEEEECcCCeeeeee--------cCCCCCeEEEEEcCCC--CEE---EEeeCCCeEEEEE--
Q psy14961        155 -------------TDDKLVNIWDMRTGYCVQSF--------EGHQSDVNSVKFHPSG--DAV---ATGSDDATCRLFD--  206 (320)
Q Consensus       155 -------------~~d~~i~iwd~~~~~~~~~~--------~~~~~~v~~v~~~p~g--~~l---~s~s~dg~i~iwd--  206 (320)
                                   +.|...+.+.+.....+...        .++...-.+..+..|+  +.|   .+-+.||.+.+--  
T Consensus       171 vawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag  250 (434)
T KOG1009|consen  171 VAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAG  250 (434)
T ss_pred             eecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccc
Confidence                         12333333333221111100        1111111122222221  111   2334566554431  


Q ss_pred             ---CCCCeeE---eEEecCc---ce-------eeeEEEEEe------------------cCCcEEEEEeCCCeEEEEcCC
Q psy14961        207 ---LRADKEV---ACYKKDS---IL-------FGATSVDFS------------------VSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       207 ---~~~~~~~---~~~~~~~---~~-------~~~~~~~~s------------------~~~~~l~~g~~dg~v~~wd~~  252 (320)
                         ...+...   -.+....   ..       -....+.|+                  |..-.+|.++ ...|.+||.+
T Consensus       251 ~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq  329 (434)
T KOG1009|consen  251 LFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQ  329 (434)
T ss_pred             eeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEeccc
Confidence               1111100   0010000   00       001122222                  2223345555 4479999988


Q ss_pred             CCeEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        253 KCCRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       253 ~~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ...++.... =|-..|+.++|++||..|+..|.||..-+-..
T Consensus       330 ~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtf  371 (434)
T KOG1009|consen  330 TLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTF  371 (434)
T ss_pred             cccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEE
Confidence            877765543 37789999999999999999999998765443

>KOG0642|consensus

Probab=99.85  E-value=2.9e-20  Score=160.78  Aligned_cols=252  Identities=19%  Similarity=0.275  Sum_probs=176.9

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEeccc----CCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE----DDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      ..|..-+.+++|+|-...|++|+.||.|++|++...    ........++.+|.++|.|+..+..++.+++|+-||+|+.
T Consensus       291 ~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~  370 (577)
T KOG0642|consen  291 RSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRC  370 (577)
T ss_pred             ecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeee
Confidence            346667889999999999999999999999998321    1122345578899999999999999999999999999999


Q ss_pred             EECCCc----------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEE
Q psy14961         92 WDVESS----------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVN  161 (320)
Q Consensus        92 wd~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~  161 (320)
                      |++..+          .....+.+|.+.++.++++..+  ..|++++.||++++|+...... .+|.....         
T Consensus       371 w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~--~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e---------  438 (577)
T KOG0642|consen  371 WNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTK--DRLLSCSSDGTVRLWEPTEESP-CTFGEPKE---------  438 (577)
T ss_pred             eccCCCCCcccccCcchhccceeccccceeeeeecccc--cceeeecCCceEEeeccCCcCc-cccCCccc---------
Confidence            965421          2345678999999999887654  5799999999999999765443 11111000         


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEec-----CcceeeeEEEEEecCCc
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKK-----DSILFGATSVDFSVSGR  235 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~  235 (320)
                                     |. --.++++-... ...++...-+.-.+.+......+..+..     ......+..+..+|.+.
T Consensus       439 ---------------~g-~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~  502 (577)
T KOG0642|consen  439 ---------------HG-YPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTAD  502 (577)
T ss_pred             ---------------cC-CcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCC
Confidence                           00 01122222111 1111111112222222222222221111     00112245567789999


Q ss_pred             EEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +.+++-+++.|+++|..++.++....+|...++++++.|+|.+|++++.|+.+++|....
T Consensus       503 ~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~  562 (577)
T KOG0642|consen  503 ITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV  562 (577)
T ss_pred             eeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccc
Confidence            999999999999999999999999999999999999999999999999999999999743

>KOG1034|consensus

Probab=99.84  E-value=3.8e-19  Score=144.68  Aligned_cols=252  Identities=21%  Similarity=0.328  Sum_probs=176.5

Q ss_pred             eCccceEEEEEcC-----CCCEEEEecCCCeEEEEEecccCCcccccccc--cccccCeEEEEec---C-CCCEEEEEeC
Q psy14961         17 MPATWVMACAYAP-----SGSVVASGGLDNKVTVYAIALEDDSSAKKKTV--ATHTSFISCCIFP---N-SDQQILTGSG   85 (320)
Q Consensus        17 ~~~~~V~~~~~~~-----~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~---~-~~~~l~s~~~   85 (320)
                      .|+..+.+++|.+     +...++++|. +.+.+|....+... ...+.+  ..|.....-+.|.   . ...++++|+.
T Consensus        36 d~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~i-r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~  113 (385)
T KOG1034|consen   36 DHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGI-RLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGY  113 (385)
T ss_pred             cCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccce-eeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecc
Confidence            4567899999874     3346666664 56888877543211 112221  1244555555553   2 2457888999


Q ss_pred             CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEEC
Q psy14961         86 DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDM  165 (320)
Q Consensus        86 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~  165 (320)
                      -|.|+|.|+.++++...+.+|...|..+.++|.. .++++++|.|..||+||+++..|+..|-|                
T Consensus       114 ~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~-~qlvls~SkD~svRlwnI~~~~Cv~VfGG----------------  176 (385)
T KOG1034|consen  114 LGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDR-PQLVLSASKDHSVRLWNIQTDVCVAVFGG----------------  176 (385)
T ss_pred             eeEEEEEecchhhhccceeccCccchhhhcCCCC-CcEEEEecCCceEEEEeccCCeEEEEecc----------------
Confidence            9999999999999999999999999999999873 57999999999999999999888766533                


Q ss_pred             cCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE------eE---------EecCcceee-eEEEE
Q psy14961        166 RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV------AC---------YKKDSILFG-ATSVD  229 (320)
Q Consensus       166 ~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~------~~---------~~~~~~~~~-~~~~~  229 (320)
                              .++|...|.++.|+++|++++|++.|.++++|+++..+..      ..         ++.....+. .++..
T Consensus       177 --------~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~d  248 (385)
T KOG1034|consen  177 --------VEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTD  248 (385)
T ss_pred             --------cccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccc
Confidence                    3579999999999999999999999999999999743211      00         111111111 11222


Q ss_pred             EecC--------CcEEEEEeCCCeEEEEcCCC----------C----eEEEEeecCCCceeEEEE--CcCCCeEEEecCC
Q psy14961        230 FSVS--------GRLLFAGYNDYTINVWDSLK----------C----CRVNHLMGHENRVSCLQV--SPDGTAFSSGSWD  285 (320)
Q Consensus       230 ~s~~--------~~~l~~g~~dg~v~~wd~~~----------~----~~~~~~~~h~~~i~~i~~--s~~~~~l~s~s~D  285 (320)
                      .+.+        |.++++=+-++.|..|....          .    ..+.++.-..-.|+-|.|  .|.+++||.|.+.
T Consensus       249 iHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~  328 (385)
T KOG1034|consen  249 IHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQS  328 (385)
T ss_pred             cccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCC
Confidence            2222        67888888888999996411          1    112333333446766655  5679999999999


Q ss_pred             CceEeeecch
Q psy14961        286 TTLRDEESKN  295 (320)
Q Consensus       286 ~~ir~~~~~~  295 (320)
                      |.+.+||..+
T Consensus       329 g~v~vwdL~~  338 (385)
T KOG1034|consen  329 GKVYVWDLDN  338 (385)
T ss_pred             CcEEEEECCC
Confidence            9999999643

>KOG0307|consensus

Probab=99.84  E-value=2.4e-20  Score=173.13  Aligned_cols=249  Identities=19%  Similarity=0.261  Sum_probs=188.2

Q ss_pred             ceEEEEEcCCCCE----EEEecCCCeEEEEEecc--cCCcccccccccccccCeEEEEecCCCC-EEEEEeCCCeEEEEE
Q psy14961         21 WVMACAYAPSGSV----VASGGLDNKVTVYAIAL--EDDSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSGDCTCALWD   93 (320)
Q Consensus        21 ~V~~~~~~~~~~~----l~s~~~dg~i~v~~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd   93 (320)
                      .-+.++|.+.|..    |+.|..||.|-+|+...  .........+...|.+.|..+.|.+... .+++|+.||.|.|||
T Consensus        66 rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWD  145 (1049)
T KOG0307|consen   66 RFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWD  145 (1049)
T ss_pred             cceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEec
Confidence            3468899887765    89999999999999764  2334445566778999999999977654 899999999999999


Q ss_pred             CCCcceeeec--ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         94 VESSQLLQSF--HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        94 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      ++..+.-..+  ....+.|.+++|.-. ..+.|++++.+|.+-+||++..+.+..+..+.                    
T Consensus       146 lnn~~tP~~~~~~~~~~eI~~lsWNrk-vqhILAS~s~sg~~~iWDlr~~~pii~ls~~~--------------------  204 (1049)
T KOG0307|consen  146 LNKPETPFTPGSQAPPSEIKCLSWNRK-VSHILASGSPSGRAVIWDLRKKKPIIKLSDTP--------------------  204 (1049)
T ss_pred             cCCcCCCCCCCCCCCcccceEeccchh-hhHHhhccCCCCCceeccccCCCcccccccCC--------------------
Confidence            9874433322  124567888877532 34678899999999999998765443332111                    


Q ss_pred             eeecCCCCCeEEEEEcCCCC-EEEEeeCCC---eEEEEECCCCe-eEeEEecCcceeeeEEEEEecCC-cEEEEEeCCCe
Q psy14961        172 QSFEGHQSDVNSVKFHPSGD-AVATGSDDA---TCRLFDLRADK-EVACYKKDSILFGATSVDFSVSG-RLLFAGYNDYT  245 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~  245 (320)
                           ....+..++|||+.. .+++++.|.   .|.+||+|... ++..++.|.  .++.++.|.+.+ .+|++++.|++
T Consensus       205 -----~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~--~GilslsWc~~D~~lllSsgkD~~  277 (1049)
T KOG0307|consen  205 -----GRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQ--RGILSLSWCPQDPRLLLSSGKDNR  277 (1049)
T ss_pred             -----CccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccc--cceeeeccCCCCchhhhcccCCCC
Confidence                 113477899999864 566666554   59999987532 334443333  367889999866 89999999999


Q ss_pred             EEEEcCCCCeEEEEeecCCCceeEEEECcC-CCeEEEecCCCceEeeecchHh
Q psy14961        246 INVWDSLKCCRVNHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEESKNRY  297 (320)
Q Consensus       246 v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~~~~  297 (320)
                      |.+|+..+++.+.++....+++..+.|.|. ..+|+.++.||.|.++..+...
T Consensus       278 ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  278 IICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             eeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            999999999999999888899999999994 5589999999999999865443

>KOG0270|consensus

Probab=99.83  E-value=7.6e-19  Score=148.04  Aligned_cols=186  Identities=25%  Similarity=0.325  Sum_probs=139.0

Q ss_pred             CCEEEEEeCCCeEEEEECCCcc---eeee------------------cccCccceeEEEEeeCCCCCEEEEEeCCCeEEE
Q psy14961         77 DQQILTGSGDCTCALWDVESSQ---LLQS------------------FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNI  135 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~---~~~~------------------~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~l  135 (320)
                      |++++.|..|..|.|||+.-..   +...                  -.+|...|..+.+.-. ..+.|+|||.|.+|++
T Consensus       192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~-~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRN-FRNVLASGSADKTVKL  270 (463)
T ss_pred             cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccc-cceeEEecCCCceEEE
Confidence            5699999999999999974211   1111                  1145555555544322 2368888988888888


Q ss_pred             EeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeE-
Q psy14961        136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEV-  213 (320)
Q Consensus       136 wd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~-  213 (320)
                      ||+.++++                           ..++..|...|.+++|+|. ..+|++|+.|+++.+.|++..... 
T Consensus       271 WD~~~g~p---------------------------~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~  323 (463)
T KOG0270|consen  271 WDVDTGKP---------------------------KSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSG  323 (463)
T ss_pred             EEcCCCCc---------------------------ceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccC
Confidence            88877654                           4445568889999999996 567899999999999999853221 


Q ss_pred             eEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCC-eEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEe
Q psy14961        214 ACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKC-CRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRD  290 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~-~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~  290 (320)
                      ..+..   ...+..++|.|... .+++++.||+|+-+|++.. .++.++.+|.++|++|++++ ...+|+|+|.|+++++
T Consensus       324 ~~wk~---~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vkl  400 (463)
T KOG0270|consen  324 KEWKF---DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKL  400 (463)
T ss_pred             ceEEe---ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEE
Confidence            11111   12356788988765 5677789999999998765 78899999999999999998 4567999999999999


Q ss_pred             eec
Q psy14961        291 EES  293 (320)
Q Consensus       291 ~~~  293 (320)
                      |+.
T Consensus       401 w~~  403 (463)
T KOG0270|consen  401 WKF  403 (463)
T ss_pred             Eee
Confidence            995

>KOG0307|consensus

Probab=99.83  E-value=2.7e-20  Score=172.79  Aligned_cols=245  Identities=20%  Similarity=0.332  Sum_probs=176.7

Q ss_pred             EEEEcCCCC-EEEEe----------cCCCeEEEEEecccCCccc--ccccccccccCeEEEEecCCCC----EEEEEeCC
Q psy14961         24 ACAYAPSGS-VVASG----------GLDNKVTVYAIALEDDSSA--KKKTVATHTSFISCCIFPNSDQ----QILTGSGD   86 (320)
Q Consensus        24 ~~~~~~~~~-~l~s~----------~~dg~i~v~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~----~l~s~~~d   86 (320)
                      ..+|+|++. ++++|          +.+.++.+|.++.......  ....+ ........+.|.+.+.    .|+.|.+|
T Consensus        11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~-~s~~rF~kL~W~~~g~~~~GlIaGG~ed   89 (1049)
T KOG0307|consen   11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSL-QSSNRFNKLAWGSYGSHSHGLIAGGLED   89 (1049)
T ss_pred             eEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccc-cccccceeeeecccCCCccceeeccccC
Confidence            457888886 44444          3356777887765443321  11111 1123345677765554    48888899


Q ss_pred             CeEEEEECCCc------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         87 CTCALWDVESS------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        87 g~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      |.|.+||...-      ..+..+..|.+.|..+.|.+.. ++.|++|+.||.|.+||++......++.            
T Consensus        90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q-~nlLASGa~~geI~iWDlnn~~tP~~~~------------  156 (1049)
T KOG0307|consen   90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQ-GNLLASGADDGEILIWDLNKPETPFTPG------------  156 (1049)
T ss_pred             CceEEecchhhccCcchHHHhhhcccCCceeeeeccccC-CceeeccCCCCcEEEeccCCcCCCCCCC------------
Confidence            99999998652      3456677899999999997663 5799999999999999998643221110            


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLF  238 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~  238 (320)
                                   -....+.|.+++|+.. ...|++++.+|++.|||++..+++..+........++.+.|+|+.. .|+
T Consensus       157 -------------~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~  223 (1049)
T KOG0307|consen  157 -------------SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL  223 (1049)
T ss_pred             -------------CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence                         1124567999999875 5678999999999999999887765555443334467899999864 666


Q ss_pred             EEeCC---CeEEEEcCCC-CeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecch
Q psy14961        239 AGYND---YTINVWDSLK-CCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       239 ~g~~d---g~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++++|   -.|.+||++. ..++..+.+|...|.++.|++ |.++|+|++.|+.|-.|+-+.
T Consensus       224 ~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t  285 (1049)
T KOG0307|consen  224 VASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT  285 (1049)
T ss_pred             eecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC
Confidence            66654   3699999764 346777889999999999999 569999999999999999644

>KOG1517|consensus

Probab=99.83  E-value=6.5e-19  Score=162.28  Aligned_cols=269  Identities=17%  Similarity=0.272  Sum_probs=184.8

Q ss_pred             CeEeecccceeEEEEEe---CccceEEEEEcC--CCCEEEEecCCCeEEEEEecccC-Ccccccc---ccccc----ccC
Q psy14961          1 MIIWDGLTQTKEHSVTM---PATWVMACAYAP--SGSVVASGGLDNKVTVYAIALED-DSSAKKK---TVATH----TSF   67 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~---~~~~V~~~~~~~--~~~~l~s~~~dg~i~v~~~~~~~-~~~~~~~---~~~~h----~~~   67 (320)
                      |.|||.++++....+..   +...|+.+.+-.  |..++++|+.||.|+||+-.... .+.....   .+..+    .+.
T Consensus      1088 i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~ 1167 (1387)
T KOG1517|consen 1088 IRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGT 1167 (1387)
T ss_pred             EEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCC
Confidence            46999999988765543   346799998864  66799999999999999743211 1111111   11111    122


Q ss_pred             eEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961         68 ISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~  146 (320)
                      -.-..|....++|+++|.-+.|+|||......+..++... ..++.+.-. ...|+.++.|..||.|++||.+...    
T Consensus      1168 ~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~-~~~gn~i~AGfaDGsvRvyD~R~a~---- 1242 (1387)
T KOG1517|consen 1168 GLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSAD-LVHGNIIAAGFADGSVRVYDRRMAP---- 1242 (1387)
T ss_pred             CeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeeccc-ccCCceEEEeecCCceEEeecccCC----
Confidence            2335676667788888888999999999888877665432 233333211 2347899999999999999987642    


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCC--eEEEEEcCCCCE-EEEeeCCCeEEEEECCCCeeEeEEec-Ccce
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD--VNSVKFHPSGDA-VATGSDDATCRLFDLRADKEVACYKK-DSIL  222 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--v~~v~~~p~g~~-l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~  222 (320)
                               .|..|.+|           +.|...  |..+.+.+.|-. |++|+.||.|++||++.......... ....
T Consensus      1243 ---------~ds~v~~~-----------R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~ 1302 (1387)
T KOG1517|consen 1243 ---------PDSLVCVY-----------REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE 1302 (1387)
T ss_pred             ---------ccccceee-----------cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccc
Confidence                     12233333           345555  889999987754 99999999999999997422111111 0011


Q ss_pred             ee--eEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEE------eec-CCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        223 FG--ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH------LMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       223 ~~--~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~------~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++  .+.+..++....+|+|+. +.|+||++.. +.+..      |.+ ..+.+.|++|+|.--+||.|+.|.++-+|.-
T Consensus      1303 yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1303 YGSALTALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred             cCccceeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence            13  578889999999999998 8999999653 22222      222 3457899999999899999999999999986


Q ss_pred             chH
Q psy14961        294 KNR  296 (320)
Q Consensus       294 ~~~  296 (320)
                      ++.
T Consensus      1381 ~k~ 1383 (1387)
T KOG1517|consen 1381 EKP 1383 (1387)
T ss_pred             CCc
Confidence            543

>KOG1587|consensus

Probab=99.83  E-value=7.1e-18  Score=152.16  Aligned_cols=276  Identities=16%  Similarity=0.199  Sum_probs=188.0

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCC--cccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      +.||+..........-.....|+++.|+| +.++++.|..+|.|.+||+.....  ..........|..+++.+.|..+.
T Consensus       224 ~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~  303 (555)
T KOG1587|consen  224 LLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNE  303 (555)
T ss_pred             EEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccC
Confidence            36899988754443444678999999998 566888889999999999864433  222223345688889988885433


Q ss_pred             --CEEEEEeCCCeEEEEECCCcce------eeecc------cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         78 --QQILTGSGDCTCALWDVESSQL------LQSFH------GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        78 --~~l~s~~~dg~v~iwd~~~~~~------~~~~~------~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                        ..+++++.||.|..|+++.-..      .....      .....+.+++|.+. +...|+.|+.+|.|..-+....+.
T Consensus       304 ~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~-~p~~FiVGTe~G~v~~~~r~g~~~  382 (555)
T KOG1587|consen  304 HNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPT-DPNHFIVGTEEGKVYKGCRKGYTP  382 (555)
T ss_pred             CCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccC-CCceEEEEcCCcEEEEEeccCCcc
Confidence              4599999999999998754221      11111      11234556777655 456899999999886533221110


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC-CCeeEeEEecCcce
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR-ADKEVACYKKDSIL  222 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~  222 (320)
                      -.            .  .+     .+.+..+..|.++|.++.++|-+..++..+.|.+++||... ...++..+..... 
T Consensus       383 ~~------------~--~~-----~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~-  442 (555)
T KOG1587|consen  383 AP------------E--VS-----YKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPD-  442 (555)
T ss_pred             cc------------c--cc-----ccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccc-
Confidence            00            0  01     11233445588899999999987655444449999999876 4445544433322 


Q ss_pred             eeeEEEEEecCCc-EEEEEeCCCeEEEEcCCC--CeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhh
Q psy14961        223 FGATSVDFSVSGR-LLFAGYNDYTINVWDSLK--CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       223 ~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~--~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~  298 (320)
                       .+..++|||.-. .++++..+|.+.+||+..  ..++.+...+....+.+.|+++|+.|+.|...|++.+++....+.
T Consensus       443 -~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~l~  520 (555)
T KOG1587|consen  443 -YVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSESLA  520 (555)
T ss_pred             -eeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCchhh
Confidence             157899999764 677788899999999754  345555555566778899999999999999999999999754433

>KOG1188|consensus

Probab=99.83  E-value=5.6e-19  Score=144.40  Aligned_cols=266  Identities=18%  Similarity=0.229  Sum_probs=182.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcC--CCCEEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAP--SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~--~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~   77 (320)
                      ++|+|..+++....+..++..++.+.|..  ....+.+|+.||+|++||+.......  ......|. .+..|+.-.-.+
T Consensus        52 v~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a--~~~~~~~~~~~f~~ld~nck~  129 (376)
T KOG1188|consen   52 VRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESA--RISWTQQSGTPFICLDLNCKK  129 (376)
T ss_pred             EEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhh--heeccCCCCCcceEeeccCcC
Confidence            46889998888777888888889999976  45689999999999999996544322  12233343 345566554456


Q ss_pred             CEEEEEeC----CCeEEEEECCCcce-eee-cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         78 QQILTGSG----DCTCALWDVESSQL-LQS-FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        78 ~~l~s~~~----dg~v~iwd~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      +.+++|..    |-.|.+||+...+. +.. ...|...|+++.|+|+ +.++|++||.||.+.+||+....         
T Consensus       130 ~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~-~pnlLlSGSvDGLvnlfD~~~d~---------  199 (376)
T KOG1188|consen  130 NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS-DPNLLLSGSVDGLVNLFDTKKDN---------  199 (376)
T ss_pred             CeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC-CCCeEEeecccceEEeeecCCCc---------
Confidence            67777653    67899999977543 443 3579999999999987 46899999999999999986531         


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceee------
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFG------  224 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~------  224 (320)
                                     ....+.....|...|.++.|+.++ +.+.+-+...+..+|++..+......+.......      
T Consensus       200 ---------------EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~  264 (376)
T KOG1188|consen  200 ---------------EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKED  264 (376)
T ss_pred             ---------------chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhh
Confidence                           001122233477789999999877 4577888899999999987765544433211100      


Q ss_pred             --eEEEE-Eec-CCcEEEEEeC-CCeEEEEcC---CC---CeEEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        225 --ATSVD-FSV-SGRLLFAGYN-DYTINVWDS---LK---CCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       225 --~~~~~-~s~-~~~~l~~g~~-dg~v~~wd~---~~---~~~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                        -.-+. .+| ++...++++. .+...++-+   .+   ...+..+.+ |..-|.++.|...+.++.|||.||.+.+|.
T Consensus       265 ~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk  344 (376)
T KOG1188|consen  265 NCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK  344 (376)
T ss_pred             hhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence              00011 123 3334444433 555555432   22   233445555 677889999999999999999999999999


Q ss_pred             c
Q psy14961        293 S  293 (320)
Q Consensus       293 ~  293 (320)
                      .
T Consensus       345 ~  345 (376)
T KOG1188|consen  345 V  345 (376)
T ss_pred             c
Confidence            5

>KOG1538|consensus

Probab=99.82  E-value=1.3e-18  Score=153.49  Aligned_cols=258  Identities=19%  Similarity=0.262  Sum_probs=193.8

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      .|+|...+.++..+..|.+.|.+++|+.||+++|+|+.|..+.+|.-..++.      --..|...|.|..|.|-...++
T Consensus        36 liyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~------LkYSH~D~IQCMsFNP~~h~La  109 (1081)
T KOG1538|consen   36 LVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI------LKYSHNDAIQCMSFNPITHQLA  109 (1081)
T ss_pred             EEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccce------eeeccCCeeeEeecCchHHHhh
Confidence            5789999999999999999999999999999999999999999996432211      1236899999999999888888


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEE
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVN  161 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~  161 (320)
                      +++-. ..-+|..+.....    .|+..+.+.+.+...||.+|+.|-.||+|.+-|-.....                + 
T Consensus       110 sCsLs-dFglWS~~qK~V~----K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek----------------~-  167 (1081)
T KOG1538|consen  110 SCSLS-DFGLWSPEQKSVS----KHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEK----------------V-  167 (1081)
T ss_pred             hcchh-hccccChhhhhHH----hhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcc----------------e-
Confidence            88743 4567876643322    244444444445577899999999999998775432211                1 


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCC-----CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSG-----DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-----~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                              .+..-.|..++|.+++|+|+.     +.++......++.++.+.. +.+..  .....+.+..+.+-|+|.+
T Consensus       168 --------~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG-~~Igk--~r~L~FdP~CisYf~NGEy  236 (1081)
T KOG1538|consen  168 --------KIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG-KQIGK--DRALNFDPCCISYFTNGEY  236 (1081)
T ss_pred             --------EEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc-eeecc--cccCCCCchhheeccCCcE
Confidence                    112223467789999999963     4677777888888887753 32211  1112233456677899999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                      ++.|+.|+.+++|- +.+.++.++...+.+|+.++..|+++..+.|..||||--++...+.++
T Consensus       237 ~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fSTVH  298 (1081)
T KOG1538|consen  237 ILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFSTVH  298 (1081)
T ss_pred             EEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHhHhh
Confidence            99999999999994 667788888888889999999999999999999999998886555554

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.82  E-value=7.6e-17  Score=143.77  Aligned_cols=246  Identities=30%  Similarity=0.523  Sum_probs=183.4

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEe-cCCCC-EEEEEeC-CCeEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIF-PNSDQ-QILTGSG-DCTCAL   91 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~-~~~~~-~l~s~~~-dg~v~i   91 (320)
                      ..+...+..+.|.+.+..++.++.|+.+.+|+.....   .....+..+. ..+..+.+ .+++. .++..+. |+.+.+
T Consensus        62 ~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  138 (466)
T COG2319          62 RGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE---KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKL  138 (466)
T ss_pred             eeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc---eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEE
Confidence            4567789999999999999999999999999975332   1222333322 24555555 55565 4554444 999999


Q ss_pred             EECCC-cceeeecccCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         92 WDVES-SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        92 wd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      |+... ......+..|...+..+++.+  ++..+++++. |+.+++|++..+.                           
T Consensus       139 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  189 (466)
T COG2319         139 WDLSTPGKLIRTLEGHSESVTSLAFSP--DGKLLASGSSLDGTIKLWDLRTGK---------------------------  189 (466)
T ss_pred             EEecCCCeEEEEEecCcccEEEEEECC--CCCEEEecCCCCCceEEEEcCCCc---------------------------
Confidence            99987 677777888999998887755  4667777775 8899999886533                           


Q ss_pred             eeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEe-EEecCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        170 CVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVA-CYKKDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       170 ~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                      .+..+.+|...|.+++|+|++. .+++++.|+.+++||...+.... .+..+.... ..  .|+|++.++++++.++.++
T Consensus       190 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~d~~~~  266 (466)
T COG2319         190 PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VS--SFSPDGSLLASGSSDGTIR  266 (466)
T ss_pred             eEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eE--eECCCCCEEEEecCCCcEE
Confidence            3334445888999999999998 55666999999999988655554 233332221 11  7999999999999999999


Q ss_pred             EEcCCCCeE-EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        248 VWDSLKCCR-VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       248 ~wd~~~~~~-~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +|+...... ...+.+|...|.++.|+|++..+++++.|+.+++|+....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  316 (466)
T COG2319         267 LWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETG  316 (466)
T ss_pred             EeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Confidence            999875544 4444688999999999999999999999999999976444

>KOG2048|consensus

Probab=99.81  E-value=5.2e-17  Score=143.54  Aligned_cols=264  Identities=17%  Similarity=0.231  Sum_probs=192.6

Q ss_pred             CeEeecccceeEEE-EEeCc-cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHS-VTMPA-TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~-~~~~~-~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |-||++...-+... +..++ ..|-+++|+ ++..|++.+.+|+|.-||+..    ...+..+....+.|++++..+.+.
T Consensus        49 IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~----lk~~~~~d~~gg~IWsiai~p~~~  123 (691)
T KOG2048|consen   49 IEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHT----LKQKYNIDSNGGAIWSIAINPENT  123 (691)
T ss_pred             EEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEeccc----CceeEEecCCCcceeEEEeCCccc
Confidence            45899987654433 33443 468899999 555889999999999999852    233344556678999999999899


Q ss_pred             EEEEEeCCCeEEEEECCCccee--eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccC
Q psy14961         79 QILTGSGDCTCALWDVESSQLL--QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITD  156 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~  156 (320)
                      .++.|+.||.+..++..++...  ..+...++.+.+++|  .+++..+++|+.||.|++||...+..+.........+..
T Consensus       124 ~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw--~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k  201 (691)
T KOG2048|consen  124 ILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSW--NPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSK  201 (691)
T ss_pred             eEEeecCCceEEEEecCCceEEEEeecccccceEEEEEe--cCCccEEEecccCceEEEEEcCCCceEEEeeeccccccc
Confidence            9999999998888888777654  334455688877777  456888999999999999999887654421111101111


Q ss_pred             CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                                         +...-|.++.|-.+ ..+++|..-|+|.+||...+..+..+..+..  .+.+++.++++.+
T Consensus       202 -------------------~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~a--dVl~Lav~~~~d~  259 (691)
T KOG2048|consen  202 -------------------REPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCHDA--DVLALAVADNEDR  259 (691)
T ss_pred             -------------------CCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhhhc--ceeEEEEcCCCCe
Confidence                               11223567777755 4699999999999999988877665544332  3567888899999


Q ss_pred             EEEEeCCCeEEEEcCCCCe----EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        237 LFAGYNDYTINVWDSLKCC----RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~----~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +++++.|+.|.-|......    .......|..-|.+++..++  .|++||.|.++.+--+++
T Consensus       260 vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  260 VFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSRE  320 (691)
T ss_pred             EEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccc
Confidence            9999999999888654432    22334578888999999988  899999999988766443

>KOG1007|consensus

Probab=99.81  E-value=8.3e-18  Score=134.80  Aligned_cols=249  Identities=21%  Similarity=0.259  Sum_probs=166.9

Q ss_pred             CccceEEEEEcCCCCE-EEEecCC-------CeEEEEEecccCCc-----cccccccc-ccccCeEEEEecCCCCEEEEE
Q psy14961         18 PATWVMACAYAPSGSV-VASGGLD-------NKVTVYAIALEDDS-----SAKKKTVA-THTSFISCCIFPNSDQQILTG   83 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~-l~s~~~d-------g~i~v~~~~~~~~~-----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~   83 (320)
                      +.+-|+.++-+|-... |+|+-.+       -.+.||.+.-+-..     ......+. .+-+.+.|+.|.|++..+++-
T Consensus        62 ~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm  141 (370)
T KOG1007|consen   62 HAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASM  141 (370)
T ss_pred             CCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEe
Confidence            4456888888886554 4444221       34779987522111     11222232 455688999999988888776


Q ss_pred             eCCCeEEEEECCCcce-eeecc-----cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         84 SGDCTCALWDVESSQL-LQSFH-----GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        84 ~~dg~v~iwd~~~~~~-~~~~~-----~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      . |..|.+|+++.... +..+.     .+.....+-+|+|..+|+.+++. .|+++..||+++..+...+          
T Consensus       142 ~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI----------  209 (370)
T KOG1007|consen  142 D-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSI----------  209 (370)
T ss_pred             c-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcch----------
Confidence            5 88999999976644 22222     12333444566776677777665 4567777777654332221          


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecC-C
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADK-EVACYKKDSILFGATSVDFSVS-G  234 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~-~  234 (320)
                                      -..|...|..+.|+|+.. +|++|+.||.|+|||.+..+ ++...+.+.  ..+.++.|+|. .
T Consensus       210 ----------------~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~Hs--HWvW~VRfn~~hd  271 (370)
T KOG1007|consen  210 ----------------EDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHS--HWVWAVRFNPEHD  271 (370)
T ss_pred             ----------------hhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCc--eEEEEEEecCccc
Confidence                            134777899999999865 57999999999999998643 333333332  24578899985 5


Q ss_pred             cEEEEEeCCCeEEEEcCCCC-----------------------------eEEEEeecCCCceeEEEECc-CCCeEEEecC
Q psy14961        235 RLLFAGYNDYTINVWDSLKC-----------------------------CRVNHLMGHENRVSCLQVSP-DGTAFSSGSW  284 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~-----------------------------~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~  284 (320)
                      +++++|+.|..|.+|-+.+-                             ..+.++..|++.|.+++||. |.=.|||-|+
T Consensus       272 qLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSY  351 (370)
T KOG1007|consen  272 QLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSY  351 (370)
T ss_pred             eEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEecc
Confidence            68899999999999953210                             01235678999999999998 6667999999


Q ss_pred             CCceEeeecchH
Q psy14961        285 DTTLRDEESKNR  296 (320)
Q Consensus       285 D~~ir~~~~~~~  296 (320)
                      ||.+-+-.....
T Consensus       352 DGRviIs~V~r~  363 (370)
T KOG1007|consen  352 DGRVIISSVPRF  363 (370)
T ss_pred             CceEEeecCChh
Confidence            999998776433

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.81  E-value=7.7e-16  Score=137.26  Aligned_cols=284  Identities=33%  Similarity=0.559  Sum_probs=208.8

Q ss_pred             CeEeeccc-ceeEEEEEeCccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLT-QTKEHSVTMPATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~-~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      +.+||... .........|...|.+++|+|++..+++++. |+.+++|++..    ......+..|...+.++.|.+++.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~  211 (466)
T COG2319         136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT----GKPLSTLAGHTDPVSSLAFSPDGG  211 (466)
T ss_pred             EEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC----CceEEeeccCCCceEEEEEcCCcc
Confidence            35899887 6666677788899999999999998888886 99999999753    223344556899999999998877


Q ss_pred             -EEEEEeCCCeEEEEECCCcceee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-EEEeccCCcc--
Q psy14961         79 -QILTGSGDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-VQSFEGHHNL--  153 (320)
Q Consensus        79 -~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-~~~~~~~~~~--  153 (320)
                       .+++++.|+.|++||...+..+. .+..|.... ...+  .+++..+++++.|+.+++|++..... +..+.+|...  
T Consensus       212 ~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~  288 (466)
T COG2319         212 LLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSF--SPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVL  288 (466)
T ss_pred             eEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeE--CCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEE
Confidence             45555899999999988777776 577777764 3344  44567888999999999999976553 3222222111  


Q ss_pred             -------------ccCCCeEEEEECcCCeeeeeec--CCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEe
Q psy14961        154 -------------ITDDKLVNIWDMRTGYCVQSFE--GHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYK  217 (320)
Q Consensus       154 -------------~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~  217 (320)
                                   ...++.+.+||..+........  .|...+..+.+.+++..++.+ ..|+.+.+|+...........
T Consensus       289 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  368 (466)
T COG2319         289 SVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLE  368 (466)
T ss_pred             EEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEec
Confidence                         1235679999988876666554  788789999994333556555 678999999988766222222


Q ss_pred             cCcceeeeEEEEEecCCcEEEE-EeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        218 KDSILFGATSVDFSVSGRLLFA-GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       218 ~~~~~~~~~~~~~s~~~~~l~~-g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ....   ...+.+++ ...... +..++.+.+|+............+...+....+++++..+++++.+.+++.|+...
T Consensus       369 ~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         369 GHSN---VLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             CCce---EEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence            2111   45677777 443443 67899999999887766655554447899999999999999999999999999866

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.79  E-value=3.2e-16  Score=136.90  Aligned_cols=267  Identities=12%  Similarity=0.122  Sum_probs=163.0

Q ss_pred             CeEeeccc-ce--eEEEEEeCccceEEEEEcCCCCEEEEec-CCCeEEEEEecccCCcccccccccccccCeEEEEecCC
Q psy14961          1 MIIWDGLT-QT--KEHSVTMPATWVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS   76 (320)
Q Consensus         1 ~~~W~~~~-~~--~~~~~~~~~~~V~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~   76 (320)
                      |.+||..+ ++  .+..+.. ......++++|++++|+.++ .++.|.+|+++ +.......... ........+.++++
T Consensus        14 I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~-~~g~l~~~~~~-~~~~~p~~i~~~~~   90 (330)
T PRK11028         14 IHVWNLNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIA-DDGALTFAAES-PLPGSPTHISTDHQ   90 (330)
T ss_pred             EEEEEECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEECCCCcEEEEEEC-CCCceEEeeee-cCCCCceEEEECCC
Confidence            46888853 22  3233332 34556789999999887654 57889999885 21111111111 11223456888999


Q ss_pred             CCEEEEEeC-CCeEEEEECCC-cc---eeeecccCccceeEEEEeeCCCCCEEEEE-eCCCeEEEEeCCCCcEEEEeccC
Q psy14961         77 DQQILTGSG-DCTCALWDVES-SQ---LLQSFHGHTGELMDLDLAPSETGNTFVSG-SSDKLVNIWDMRTGYCVQSFEGH  150 (320)
Q Consensus        77 ~~~l~s~~~-dg~v~iwd~~~-~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~~~~~~~~~~~~  150 (320)
                      ++++++++. ++.|.+|++++ +.   .+..+. +......+++  ++++++++++ ..++.|.+||+.+...+..... 
T Consensus        91 g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~--~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~-  166 (330)
T PRK11028         91 GRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANI--DPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEP-  166 (330)
T ss_pred             CCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEe--CCCCCEEEEeeCCCCEEEEEEECCCCcccccCC-
Confidence            998888764 88999999864 22   222222 2223445555  5578777654 4568999999865321110000 


Q ss_pred             CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCC--e--eEeEEecCc----c
Q psy14961        151 HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRAD--K--EVACYKKDS----I  221 (320)
Q Consensus       151 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~--~--~~~~~~~~~----~  221 (320)
                                        ... ... .......++|+|+|++++++.+ +++|.+|+++..  +  .+.......    .
T Consensus       167 ------------------~~~-~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~  226 (330)
T PRK11028        167 ------------------AEV-TTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSD  226 (330)
T ss_pred             ------------------Cce-ecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCC
Confidence                              000 000 1123457899999999988776 899999999742  2  122111100    0


Q ss_pred             eeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecC---CCceeEEEECcCCCeEEEecC-CCceEeeecc
Q psy14961        222 LFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGH---ENRVSCLQVSPDGTAFSSGSW-DTTLRDEESK  294 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h---~~~i~~i~~s~~~~~l~s~s~-D~~ir~~~~~  294 (320)
                      ......+.|+|++++|+++. .++.|.+|+.........+.+|   ......++|+|||++|+++.. +++|.+|+..
T Consensus       227 ~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        227 TRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             CccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            01123588999999999986 4789999987543221222322   124568999999999887775 8999999863

>KOG1445|consensus

Probab=99.79  E-value=3.6e-18  Score=149.97  Aligned_cols=260  Identities=15%  Similarity=0.253  Sum_probs=172.2

Q ss_pred             EEcCCCCEEEE--ecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCc-----
Q psy14961         26 AYAPSGSVVAS--GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESS-----   97 (320)
Q Consensus        26 ~~~~~~~~l~s--~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~-----   97 (320)
                      .|+-+..++|.  ++..|.|-||++...+.-..-...-......|+.+.|.+ +.+.|+.++.||.|++|.+..+     
T Consensus       586 Gfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~  665 (1012)
T KOG1445|consen  586 GFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPEN  665 (1012)
T ss_pred             ceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcc
Confidence            36666666664  566799999998643221111111123446678888855 5688999999999999998654     


Q ss_pred             --ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         98 --QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        98 --~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                        .+...+..|...|.++.|+|-. .+.|++++.|.+|++||++++..                           ...+.
T Consensus       666 ~~tPe~~lt~h~eKI~slRfHPLA-advLa~asyd~Ti~lWDl~~~~~---------------------------~~~l~  717 (1012)
T KOG1445|consen  666 EMTPEKILTIHGEKITSLRFHPLA-ADVLAVASYDSTIELWDLANAKL---------------------------YSRLV  717 (1012)
T ss_pred             cCCcceeeecccceEEEEEecchh-hhHhhhhhccceeeeeehhhhhh---------------------------hheec
Confidence              2345677899999999999864 36888999999998888876542                           23456


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-eeeeEEEEEecCCcEEEEEeC----CCeEEEEc
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-LFGATSVDFSVSGRLLFAGYN----DYTINVWD  250 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd  250 (320)
                      +|++.|..++|+|+|+.+|+.+.||++++|+.+.++.. .++.... ......+.|..+|.++++.+.    ..+|.+||
T Consensus       718 gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~p-v~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~  796 (1012)
T KOG1445|consen  718 GHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQP-VYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYD  796 (1012)
T ss_pred             cCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCc-cccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhh
Confidence            89999999999999999999999999999998876542 2222221 122346778999998877654    45788998


Q ss_pred             CCCC--eEEEEee-cCCCceeEEEECcCC-CeEEEecCCCceEeeec--chHhhhheeeeeeecCCcceE
Q psy14961        251 SLKC--CRVNHLM-GHENRVSCLQVSPDG-TAFSSGSWDTTLRDEES--KNRYVQYLLRSRITKPTQGLT  314 (320)
Q Consensus       251 ~~~~--~~~~~~~-~h~~~i~~i~~s~~~-~~l~s~s~D~~ir~~~~--~~~~~~~~~~~~~~~~~~~~~  314 (320)
                      .+..  .++.+.. .-.-.+.---+.+|. -+|++|-.|.+|..++.  +.+|..-+..-.+.-+.|||-
T Consensus       797 Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy~lpl~~f~sp~~hqGl~  866 (1012)
T KOG1445|consen  797 AQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPYLLPLAPFMSPVGHQGLA  866 (1012)
T ss_pred             hhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCCceeeecccccCCCccccee
Confidence            6542  2332221 111111112344553 46888889999999984  444433222223344456653

>KOG1963|consensus

Probab=99.79  E-value=2.4e-16  Score=143.28  Aligned_cols=291  Identities=14%  Similarity=0.158  Sum_probs=195.5

Q ss_pred             CeEeecccceeEEE---EE-eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC
Q psy14961          1 MIIWDGLTQTKEHS---VT-MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS   76 (320)
Q Consensus         1 ~~~W~~~~~~~~~~---~~-~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~   76 (320)
                      +++|+..+.+....   .. -|...+++.++||.+.++|+|..||.|.+|.-............+.-|...|.++.|+++
T Consensus       183 ~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~  262 (792)
T KOG1963|consen  183 IHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSD  262 (792)
T ss_pred             EEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecC
Confidence            35777776442111   11 234457889999999999999999999999632212233344556778899999999999


Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec--------
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE--------  148 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~--------  148 (320)
                      |.+|++|+..+.+.+|.+++++ .+-++...+++..+.++  +++++.+....|..|.+-...+.....+++        
T Consensus       263 G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS--~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~  339 (792)
T KOG1963|consen  263 GAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVS--PDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPS  339 (792)
T ss_pred             CceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEc--CCCCeEEEEecCceEEEEeccchhhhhhccCccCCCcc
Confidence            9999999999999999999887 34455567778777664  577889999999999988764432222111        


Q ss_pred             ---------------cCCcc---ccCCCeEEEEECcCCeeeeeec-----------CCCCCeEEEEEcCCCCEEEEee--
Q psy14961        149 ---------------GHHNL---ITDDKLVNIWDMRTGYCVQSFE-----------GHQSDVNSVKFHPSGDAVATGS--  197 (320)
Q Consensus       149 ---------------~~~~~---~~~d~~i~iwd~~~~~~~~~~~-----------~~~~~v~~v~~~p~g~~l~s~s--  197 (320)
                                     +..+.   -+..+.|.+||+-+...+..+.           .+...+..++.+-.|.++++.-  
T Consensus       340 ~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~  419 (792)
T KOG1963|consen  340 TKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEAR  419 (792)
T ss_pred             ccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeee
Confidence                           11110   1245788899987765554432           1233577888888899888863  


Q ss_pred             ------CCC--eEEEEECCCCeeEe----EE-ecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCC----------
Q psy14961        198 ------DDA--TCRLFDLRADKEVA----CY-KKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLK----------  253 (320)
Q Consensus       198 ------~dg--~i~iwd~~~~~~~~----~~-~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~----------  253 (320)
                            .||  .+++|.......-.    .. .++... .+..+..++... ..++++.||.+++|-...          
T Consensus       420 ~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~-~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~  498 (792)
T KOG1963|consen  420 IDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNA-FVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSN  498 (792)
T ss_pred             ehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCce-eEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccc
Confidence                  233  57889765443211    11 122222 223333444444 899999999999996521          


Q ss_pred             CeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        254 CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       254 ~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ..+...-.-|..++++++|+.||.. ++.|.|.+|.+||..+.
T Consensus       499 W~c~~i~sy~k~~i~a~~fs~dGsl-la~s~~~~Itiwd~~~~  540 (792)
T KOG1963|consen  499 WTCKAIGSYHKTPITALCFSQDGSL-LAVSFDDTITIWDYDTK  540 (792)
T ss_pred             eEEeeeeccccCcccchhhcCCCcE-EEEecCCEEEEecCCCh
Confidence            1122212237889999999999965 55789999999998774

>KOG0650|consensus

Probab=99.79  E-value=9.4e-18  Score=146.35  Aligned_cols=229  Identities=19%  Similarity=0.256  Sum_probs=172.0

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      .+.+|.+.|.|+...+.|.+|++|+.||+|+||.+.+++++..+. ..+.|.+++|.|.++-..||.+..+. +.+-|..
T Consensus       395 vyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~  472 (733)
T KOG0650|consen  395 VYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPI  472 (733)
T ss_pred             eEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCc-eEEeCcc
Confidence            457899999999999999999999999999999999999998876 46789999999988766666655544 5555544


Q ss_pred             CCcEEEEeccC------CccccCCCeEEEEECcCCe----eeeeecCCCCCeEEEEEcCCCCEEEEeeCC---CeEEEEE
Q psy14961        140 TGYCVQSFEGH------HNLITDDKLVNIWDMRTGY----CVQSFEGHQSDVNSVKFHPSGDAVATGSDD---ATCRLFD  206 (320)
Q Consensus       140 ~~~~~~~~~~~------~~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g~i~iwd  206 (320)
                      -|..+......      ......+..+..|.-....    -+.....|...|+.+.||..|+||++.+.+   ..|.|++
T Consensus       473 ~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQ  552 (733)
T KOG0650|consen  473 FGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQ  552 (733)
T ss_pred             ccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEe
Confidence            44222111111      1112245677788543211    122334588899999999999999988764   4688999


Q ss_pred             CCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      +.....+.-|.....  .+..+.|+|...+|++++.. .|++||+.....+..+......|+.++.+|.|.-|+.||.|+
T Consensus       553 LSK~~sQ~PF~kskG--~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~  629 (733)
T KOG0650|consen  553 LSKRKSQSPFRKSKG--LVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDK  629 (733)
T ss_pred             cccccccCchhhcCC--ceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCC
Confidence            876554433332221  24678999999999998854 799999988877888888888999999999999999999999


Q ss_pred             ceEeeec
Q psy14961        287 TLRDEES  293 (320)
Q Consensus       287 ~ir~~~~  293 (320)
                      .+..+|.
T Consensus       630 k~~WfDl  636 (733)
T KOG0650|consen  630 KMCWFDL  636 (733)
T ss_pred             eeEEEEc
Confidence            9999884

>KOG0771|consensus

Probab=99.79  E-value=6.1e-18  Score=141.93  Aligned_cols=197  Identities=22%  Similarity=0.266  Sum_probs=141.9

Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      .+++|..++..+++|+.||++|+|+......+.....|.++|.++.|+  +||++|++.+.| ..++|+.+++.++....
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS--~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFS--PDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeC--CCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            568889999999999999999999976666666677899999999885  578999999999 89999999986554432


Q ss_pred             cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC---C--EEEEeeCCCeEEEEECCCCe---eEeEEecCc
Q psy14961        149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG---D--AVATGSDDATCRLFDLRADK---EVACYKKDS  220 (320)
Q Consensus       149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g---~--~l~s~s~dg~i~iwd~~~~~---~~~~~~~~~  220 (320)
                      +...                         ......+.|+.++   .  .++....-+.|+.|++....   .+...+...
T Consensus       225 ~~~k-------------------------~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~  279 (398)
T KOG0771|consen  225 PFSK-------------------------DEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIK  279 (398)
T ss_pred             Cccc-------------------------chhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhh
Confidence            1110                         0112234444433   1  12233344556665543211   111111111


Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ..-++++++++++|+++|.|+.+|.|.+++..+.+.+... ..|...|+.++|+||.+++++-|.|.++++.-.
T Consensus       280 ~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l  353 (398)
T KOG0771|consen  280 RFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKL  353 (398)
T ss_pred             ccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEE
Confidence            1125789999999999999999999999998887766544 579999999999999999999999999887664

>KOG4227|consensus

Probab=99.78  E-value=5e-17  Score=135.42  Aligned_cols=274  Identities=18%  Similarity=0.215  Sum_probs=193.7

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEeccc--CCccccccc-ccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKKKT-VATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~--~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..|..-|+++.|+.++.+|++|+.|..+++|.++-.  ......+.. -..|.+-|.|+.|.....++++|.++++|.+.
T Consensus        53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H  132 (609)
T KOG4227|consen   53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH  132 (609)
T ss_pred             hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence            345667999999999999999999999999987511  001111111 23466889999999888999999999999999


Q ss_pred             ECCCcceeeeccc--CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE------EE---------EeccCCc---
Q psy14961         93 DVESSQLLQSFHG--HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC------VQ---------SFEGHHN---  152 (320)
Q Consensus        93 d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~------~~---------~~~~~~~---  152 (320)
                      |+++.+.+..+..  ..+.|+.+..+|.  .+.|++.+.++.|.+||.+..+.      +.         .|.+...   
T Consensus       133 DiEt~qsi~V~~~~~~~~~VY~m~~~P~--DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li  210 (609)
T KOG4227|consen  133 DIETKQSIYVANENNNRGDVYHMDQHPT--DNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALI  210 (609)
T ss_pred             ecccceeeeeecccCcccceeecccCCC--CceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeE
Confidence            9999887766542  2357888877665  57999999999999999976541      11         1111110   


Q ss_pred             -cccCCCeEEEEECcCCe-eeee---ecCCC---CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe-eEeEEecCcc--
Q psy14961        153 -LITDDKLVNIWDMRTGY-CVQS---FEGHQ---SDVNSVKFHPSGDAVATGSDDATCRLFDLRADK-EVACYKKDSI--  221 (320)
Q Consensus       153 -~~~~d~~i~iwd~~~~~-~~~~---~~~~~---~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~--  221 (320)
                       .....+-+.+||.+... ++..   +++..   ..-.++.|+|+|..|++--....-.+||+.+.+ .+..+.+...  
T Consensus       211 ~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY  290 (609)
T KOG4227|consen  211 LVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGY  290 (609)
T ss_pred             EeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcc
Confidence             11245667899987542 2221   12222   223578999999999988877777889987633 3333332221  


Q ss_pred             --eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-----C------------------eEEEEeecCCCceeEEEECcCC
Q psy14961        222 --LFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-----C------------------CRVNHLMGHENRVSCLQVSPDG  276 (320)
Q Consensus       222 --~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-----~------------------~~~~~~~~h~~~i~~i~~s~~~  276 (320)
                        .+.+-++.|.-|- .+++|+.+--|.+|.+-.     +                  ..+..+.+|..-++.+.|+|..
T Consensus       291 ~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~  369 (609)
T KOG4227|consen  291 CNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHN  369 (609)
T ss_pred             eeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCc
Confidence              2234567776554 499999999999996421     0                  1134467999999999999999


Q ss_pred             CeEEEecCCCceEeee
Q psy14961        277 TAFSSGSWDTTLRDEE  292 (320)
Q Consensus       277 ~~l~s~s~D~~ir~~~  292 (320)
                      .+|+|.|-...+++|.
T Consensus       370 ~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  370 NLLVSSGVENSFKLWS  385 (609)
T ss_pred             ceEeccchhhheeccc
Confidence            9999999999999997

>KOG4378|consensus

Probab=99.78  E-value=1.3e-17  Score=142.62  Aligned_cols=249  Identities=16%  Similarity=0.207  Sum_probs=169.4

Q ss_pred             ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE--EeCCCeEEEEECCCc--ce--eeecccCccce
Q psy14961         37 GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT--GSGDCTCALWDVESS--QL--LQSFHGHTGEL  110 (320)
Q Consensus        37 ~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~~~dg~v~iwd~~~~--~~--~~~~~~~~~~v  110 (320)
                      ++....+++||+........-.....  ...+.++.|.... .|++  .+.|..+++|.-...  ..  +....+  ...
T Consensus         8 aS~gd~~kl~D~s~~~~~~~~~~~t~--~pg~~s~~w~~~n-~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g--d~~   82 (673)
T KOG4378|consen    8 ASTGDKTKLSDFSDLETKSEYVHQTA--EPGDFSFNWQRRN-FLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG--DNA   82 (673)
T ss_pred             eccCCceEEeecccccCccccccCCC--CCcceeeeccccc-eEEEeecCCceeEEEecccCCCCccceeecccc--chH
Confidence            33345799999864322211111111  2337788887654 3444  456889999964322  11  111221  122


Q ss_pred             eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeec
Q psy14961        111 MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus       111 ~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      .|++.  .+...++++|+..+.|++||++...+.+.+.+|...+               ...|.|.+..+.++.....|.
T Consensus        83 ~Cv~~--~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~  160 (673)
T KOG4378|consen   83 FCVAC--ASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT  160 (673)
T ss_pred             HHHhh--hhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee
Confidence            33332  3334789999999999999999877777777776543               245678888888877666665


Q ss_pred             CC-CCCeEEEEEcCCCCE-EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCC
Q psy14961        176 GH-QSDVNSVKFHPSGDA-VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSL  252 (320)
Q Consensus       176 ~~-~~~v~~v~~~p~g~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~  252 (320)
                      .. ...|.-+.|+|..+. |.+++.+|.|.+||+....+...+..... .....++|+|... +|++-+.|..|.+||..
T Consensus       161 ~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~Hs-AP~~gicfspsne~l~vsVG~Dkki~~yD~~  239 (673)
T KOG4378|consen  161 IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHS-APCRGICFSPSNEALLVSVGYDKKINIYDIR  239 (673)
T ss_pred             cCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhcc-CCcCcceecCCccceEEEecccceEEEeecc
Confidence            44 345678999998775 57889999999999987666544332111 1245688998654 67788999999999987


Q ss_pred             CCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ...... ....+.+.+.++|+++|.+|+.|+..|.|..||++
T Consensus       240 s~~s~~-~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R  280 (673)
T KOG4378|consen  240 SQASTD-RLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMR  280 (673)
T ss_pred             cccccc-eeeecCCcceeeecCCceEEEeecCCceEEEEecc
Confidence            654443 34567889999999999999999999999999964

>KOG4328|consensus

Probab=99.78  E-value=9.9e-18  Score=141.89  Aligned_cols=208  Identities=19%  Similarity=0.283  Sum_probs=155.8

Q ss_pred             ccccccccCeEEEEecCCCC--EEEEEeCCCeEEEEECCCcce----eeecccCccceeEEEEeeCCCCCEEEEEeCCCe
Q psy14961         59 KTVATHTSFISCCIFPNSDQ--QILTGSGDCTCALWDVESSQL----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKL  132 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~  132 (320)
                      .....+...|++++|.|..+  .+++|+.-|.|=+||+.+++.    +.-+..|..+|.++.|.|... ..+++.|.||+
T Consensus       180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~-s~i~ssSyDGt  258 (498)
T KOG4328|consen  180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANT-SQIYSSSYDGT  258 (498)
T ss_pred             ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCCh-hheeeeccCce
Confidence            44556788999999977654  677888899999999964332    345678999999999998754 68999999999


Q ss_pred             EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee
Q psy14961        133 VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE  212 (320)
Q Consensus       133 i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~  212 (320)
                      |++=|++.+..-..                         ...........++.|+.+...++.+..=|.+.+||++++..
T Consensus       259 iR~~D~~~~i~e~v-------------------------~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s  313 (498)
T KOG4328|consen  259 IRLQDFEGNISEEV-------------------------LSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS  313 (498)
T ss_pred             eeeeeecchhhHHH-------------------------hhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc
Confidence            99999876532110                         11111122356778887777788887777999999998764


Q ss_pred             -EeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCCe----EEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        213 -VACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKCC----RVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       213 -~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~~----~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                       ......+..  .+.+++++|... +|||++.|++++|||+++..    +.-....|.-.|.+..|||.+-.|++.++|.
T Consensus       314 ~~~~~~lh~k--KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~  391 (498)
T KOG4328|consen  314 EYENLRLHKK--KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDN  391 (498)
T ss_pred             cchhhhhhhc--ccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCC
Confidence             222222222  468899999765 78999999999999987533    2334568999999999999777799999999


Q ss_pred             ceEeeecc
Q psy14961        287 TLRDEESK  294 (320)
Q Consensus       287 ~ir~~~~~  294 (320)
                      +||+|+..
T Consensus       392 ~IRv~dss  399 (498)
T KOG4328|consen  392 EIRVFDSS  399 (498)
T ss_pred             ceEEeecc
Confidence            99999973

>KOG1524|consensus

Probab=99.76  E-value=9.5e-17  Score=138.57  Aligned_cols=231  Identities=16%  Similarity=0.207  Sum_probs=161.1

Q ss_pred             CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcccee
Q psy14961         32 SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM  111 (320)
Q Consensus        32 ~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~  111 (320)
                      ..++.++.||.+.+..-     ..........|.+.+.|-.|+++|.-|+++++||.|++|. .+|-+...+-....+|+
T Consensus        76 d~~~i~s~DGkf~il~k-----~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~  149 (737)
T KOG1524|consen   76 DTLLICSNDGRFVILNK-----SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIR  149 (737)
T ss_pred             ceEEEEcCCceEEEecc-----cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeE
Confidence            46777888999888743     2333456778999999999999999999999999999998 45655555555677899


Q ss_pred             EEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC
Q psy14961        112 DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD  191 (320)
Q Consensus       112 ~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~  191 (320)
                      |++|.|.++ +.+++.+.  .+.+=-+.                           ....+...+.|.+-|.+++|+|..+
T Consensus       150 c~~W~p~S~-~vl~c~g~--h~~IKpL~---------------------------~n~k~i~WkAHDGiiL~~~W~~~s~  199 (737)
T KOG1524|consen  150 CARWAPNSN-SIVFCQGG--HISIKPLA---------------------------ANSKIIRWRAHDGLVLSLSWSTQSN  199 (737)
T ss_pred             EEEECCCCC-ceEEecCC--eEEEeecc---------------------------cccceeEEeccCcEEEEeecCcccc
Confidence            999988653 45554432  23222111                           1122334567999999999999999


Q ss_pred             EEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEE
Q psy14961        192 AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ  271 (320)
Q Consensus       192 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~  271 (320)
                      .+++|++|-..++||.. +..+.  ......+.+++++|.|+ +.++.|+.+ ++++           -.+..+.|-.++
T Consensus       200 lI~sgGED~kfKvWD~~-G~~Lf--~S~~~ey~ITSva~npd-~~~~v~S~n-t~R~-----------~~p~~GSifnls  263 (737)
T KOG1524|consen  200 IIASGGEDFRFKIWDAQ-GANLF--TSAAEEYAITSVAFNPE-KDYLLWSYN-TARF-----------SSPRVGSIFNLS  263 (737)
T ss_pred             ceeecCCceeEEeeccc-Ccccc--cCChhccceeeeeeccc-cceeeeeee-eeee-----------cCCCccceEEEE
Confidence            99999999999999965 33432  22223356899999999 666666532 3331           234567899999


Q ss_pred             ECcCCCeEEEecCCCceEeee-cchHhhhheeeeeeecCCcceEE
Q psy14961        272 VSPDGTAFSSGSWDTTLRDEE-SKNRYVQYLLRSRITKPTQGLTV  315 (320)
Q Consensus       272 ~s~~~~~l~s~s~D~~ir~~~-~~~~~~~~~~~~~~~~~~~~~~~  315 (320)
                      |||||..++.|...|.+-+=. .++.++ +-+......|.+-|+|
T Consensus       264 WS~DGTQ~a~gt~~G~v~~A~~ieq~l~-~~n~~~t~~~r~~I~v  307 (737)
T KOG1524|consen  264 WSADGTQATCGTSTGQLIVAYAIEQQLV-SGNLKATSKSRKSITV  307 (737)
T ss_pred             EcCCCceeeccccCceEEEeeeehhhhh-hccceeEeeccceEEe
Confidence            999999999998888765433 444433 3333355566666655

>KOG0644|consensus

Probab=99.75  E-value=6.1e-18  Score=152.54  Aligned_cols=226  Identities=19%  Similarity=0.338  Sum_probs=179.8

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +.+|.+.|.|..|+..|.+|++|+.|..++||...    ...+...+.+|.+.++.++.+.+.-.+++++.|..|++|.+
T Consensus       186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~e----t~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl  261 (1113)
T KOG0644|consen  186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSME----TARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRL  261 (1113)
T ss_pred             HHhhhhheeeeeeccccceEeecCccceeeeeecc----chhhhccCCCCccccchhccchhhhhhhhcccCceEEEEec
Confidence            44677889999999999999999999999999864    33455678899999999998888888999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc--------------EEEEe--c--------cC
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY--------------CVQSF--E--------GH  150 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~--------------~~~~~--~--------~~  150 (320)
                      .++.++..+.+|.+.|+.++|.|..      +.+.||++++||.+-..              .+..+  .        +.
T Consensus       262 ~~~~pvsvLrghtgavtaiafsP~~------sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs  335 (1113)
T KOG0644|consen  262 PDGAPVSVLRGHTGAVTAIAFSPRA------SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGS  335 (1113)
T ss_pred             CCCchHHHHhccccceeeeccCccc------cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccccccccc
Confidence            9999999999999999999987753      67889999999976110              00000  0        00


Q ss_pred             C----------------c--------------cc--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEee
Q psy14961        151 H----------------N--------------LI--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGS  197 (320)
Q Consensus       151 ~----------------~--------------~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s  197 (320)
                      .                +              .+  ..+-.+++|++-++.....+.+|...+..+.+||-.. ...+++
T Consensus       336 ~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag  415 (1113)
T KOG0644|consen  336 RDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAG  415 (1113)
T ss_pred             CCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhcc
Confidence            0                0              00  0123467899999988888999999999999999655 457899


Q ss_pred             CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        198 DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       198 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      .||...|||+-.+.++..+...  .......+||+||+.++.....|.+.|....
T Consensus       416 ~dgst~iwdi~eg~pik~y~~g--h~kl~d~kFSqdgts~~lsd~hgql~i~g~g  468 (1113)
T KOG0644|consen  416 YDGSTIIWDIWEGIPIKHYFIG--HGKLVDGKFSQDGTSIALSDDHGQLYILGTG  468 (1113)
T ss_pred             CCCceEeeecccCCcceeeecc--cceeeccccCCCCceEecCCCCCceEEeccC
Confidence            9999999999888877766533  3345678899999999999888999888644

>KOG2394|consensus

Probab=99.75  E-value=3.3e-16  Score=135.27  Aligned_cols=244  Identities=18%  Similarity=0.230  Sum_probs=151.0

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccc--cccccccccCeEEEEe-----cCCCCEEEEEeCCCeEEEEEC
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAK--KKTVATHTSFISCCIF-----PNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~--~~~~~~h~~~v~~~~~-----~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +....++-.|.+|+-.- ...+.+|+.....+....  +..+..  ..-+|-.|     .+.+-.++.|=.-|.|.+.|.
T Consensus       126 ~~~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y~g--t~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp  202 (636)
T KOG2394|consen  126 VTNTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREYKG--TSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDP  202 (636)
T ss_pred             eeeccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcccC--CCCceecccccccCCCCcceEEeeccCceEEecc
Confidence            44555566666655432 246778876432211111  111111  11223333     234445777777788998887


Q ss_pred             CCcceeeec----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC--eEEEEEC-cC
Q psy14961         95 ESSQLLQSF----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK--LVNIWDM-RT  167 (320)
Q Consensus        95 ~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~--~i~iwd~-~~  167 (320)
                      ......+-+    .-.+..|.++.|.+..+ ..|+.+-.+|.+.++|........  ...........  .|..|-- .+
T Consensus       203 ~~~~~sklfne~r~i~ktsvT~ikWvpg~~-~~Fl~a~~sGnlyly~~~~~~~~t--~p~~~~~k~~~~f~i~t~ksk~~  279 (636)
T KOG2394|consen  203 INFEVSKLFNEERLINKSSVTCIKWVPGSD-SLFLVAHASGNLYLYDKEIVCGAT--APSYQALKDGDQFAILTSKSKKT  279 (636)
T ss_pred             hhhHHHHhhhhcccccccceEEEEEEeCCC-ceEEEEEecCceEEeeccccccCC--CCcccccCCCCeeEEeeeecccc
Confidence            543211111    11347789999988755 578888899999999873211000  00000011111  1222211 11


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                      ..++..+.--...|+..+|+|||++||+.+.||.++|+|..+.+.+...+..  ..+..++.|||||+||++|++|.-|.
T Consensus       280 rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY--FGGLLCvcWSPDGKyIvtGGEDDLVt  357 (636)
T KOG2394|consen  280 RNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSY--FGGLLCVCWSPDGKYIVTGGEDDLVT  357 (636)
T ss_pred             CCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhh--ccceEEEEEcCCccEEEecCCcceEE
Confidence            1233332223448999999999999999999999999999875543322211  12457899999999999999999999


Q ss_pred             EEcCCCCeEEEEeecCCCceeEEEEC
Q psy14961        248 VWDSLKCCRVNHLMGHENRVSCLQVS  273 (320)
Q Consensus       248 ~wd~~~~~~~~~~~~h~~~i~~i~~s  273 (320)
                      +|.+..++.+..-.+|..+|+.++|.
T Consensus       358 VwSf~erRVVARGqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  358 VWSFEERRVVARGQGHKSWVSVVAFD  383 (636)
T ss_pred             EEEeccceEEEeccccccceeeEeec
Confidence            99999999999889999999999998

>KOG0303|consensus

Probab=99.75  E-value=2.1e-16  Score=131.68  Aligned_cols=231  Identities=19%  Similarity=0.265  Sum_probs=161.4

Q ss_pred             EEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEecCCC-CEEEEEeCCCeE
Q psy14961         15 VTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIFPNSD-QQILTGSGDCTC   89 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v   89 (320)
                      +..|...|..++|+| +...||+||.|.+|.||.+.-+..   .......+.+|..-|-.+.|.+.. +.|++++.|.+|
T Consensus        77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v  156 (472)
T KOG0303|consen   77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV  156 (472)
T ss_pred             ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence            456788899999998 667999999999999999853222   223355788999999999997654 678899999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      .+||+.++..+..+. |..-|++++|  +.+|.+|++.+.|..||+||.+.+..+..-.+|..                 
T Consensus       157 ~iWnv~tgeali~l~-hpd~i~S~sf--n~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG-----------------  216 (472)
T KOG0303|consen  157 SIWNVGTGEALITLD-HPDMVYSMSF--NRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEG-----------------  216 (472)
T ss_pred             EEEeccCCceeeecC-CCCeEEEEEe--ccCCceeeeecccceeEEEcCCCCcEeeecccccC-----------------
Confidence            999999999888877 8898888877  55799999999999999999998877655433321                 


Q ss_pred             eeeeecCCCCCeEEEEEcCCCCEEEEe---eCCCeEEEEECCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEe-CCC
Q psy14961        170 CVQSFEGHQSDVNSVKFHPSGDAVATG---SDDATCRLFDLRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGY-NDY  244 (320)
Q Consensus       170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~---s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg  244 (320)
                             +  .-..+-|-.+|..+-+|   ..+..+-+||...-+. +...+.+.. .++.---+.+|.++++.++ .|+
T Consensus       217 -------~--k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtS-nGvl~PFyD~dt~ivYl~GKGD~  286 (472)
T KOG0303|consen  217 -------A--KPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTS-NGVLLPFYDPDTSIVYLCGKGDS  286 (472)
T ss_pred             -------C--CcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccC-CceEEeeecCCCCEEEEEecCCc
Confidence                   1  12234566667744333   2477899998764332 222222211 1233334678888886655 799


Q ss_pred             eEEEEcCCCCeEE-EEeec--CCCceeEEEECcC
Q psy14961        245 TINVWDSLKCCRV-NHLMG--HENRVSCLQVSPD  275 (320)
Q Consensus       245 ~v~~wd~~~~~~~-~~~~~--h~~~i~~i~~s~~  275 (320)
                      .|+-|......+. ..+..  -..+=..|.|-|.
T Consensus       287 ~IRYyEit~d~P~~hyln~f~S~epQRG~g~mPK  320 (472)
T KOG0303|consen  287 SIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMPK  320 (472)
T ss_pred             ceEEEEecCCCceeEEecccccCCcccccccccc
Confidence            9999987665432 22222  2334456677663

>KOG0290|consensus

Probab=99.75  E-value=6.9e-16  Score=123.98  Aligned_cols=252  Identities=17%  Similarity=0.232  Sum_probs=171.2

Q ss_pred             cceEEEEEcC---CCCEEEEecC----CCeEEEEEecccCCcccccccccccccCeEEEEecCCCC----EEEEEeCCCe
Q psy14961         20 TWVMACAYAP---SGSVVASGGL----DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ----QILTGSGDCT   88 (320)
Q Consensus        20 ~~V~~~~~~~---~~~~l~s~~~----dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----~l~s~~~dg~   88 (320)
                      -.+.++.|+.   .+.+||.|+.    .+.|.+..++.+..+. ....-..|.-+++.+.|.|+..    .+++.+. ..
T Consensus        45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~-~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~-D~  122 (364)
T KOG0290|consen   45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGEL-VEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS-DF  122 (364)
T ss_pred             CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCce-eccCCCCCCCCccceEecCCccccCcchhhccc-Ce
Confidence            5678999983   3347888874    4677777765221111 1112246778889999977642    2444343 48


Q ss_pred             EEEEECCC--ccee--eec-----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCe
Q psy14961         89 CALWDVES--SQLL--QSF-----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKL  159 (320)
Q Consensus        89 v~iwd~~~--~~~~--~~~-----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~  159 (320)
                      +|+|.+..  .+..  ..+     ..+..++++..|.-. +.+++.+++-|.++.+||+.++..                
T Consensus       123 LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~-dp~~igtSSiDTTCTiWdie~~~~----------------  185 (364)
T KOG0290|consen  123 LRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEV-DPNLIGTSSIDTTCTIWDIETGVS----------------  185 (364)
T ss_pred             EEEEeccCcCCceehhhhhccCcccccCCcccccccccC-CcceeEeecccCeEEEEEEeeccc----------------
Confidence            99998863  2111  111     123456666666532 457889999999999999987621                


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeE-EecCcceeeeEEEEEecC-CcE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVAC-YKKDSILFGATSVDFSVS-GRL  236 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~s~~-~~~  236 (320)
                              +....++..|..+|..++|...+ +.||+++.||.++++|++..+.... ++..........++++++ -++
T Consensus       186 --------~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpny  257 (364)
T KOG0290|consen  186 --------GTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNY  257 (364)
T ss_pred             --------cceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchH
Confidence                    11223456799999999999865 4689999999999999997665332 333222223456777764 457


Q ss_pred             EEEEeC-CCeEEEEcCCC-CeEEEEeecCCCceeEEEECcC-CCeEEEecCCCceEeeecchHhh
Q psy14961        237 LFAGYN-DYTINVWDSLK-CCRVNHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       237 l~~g~~-dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~~~~~  298 (320)
                      +|+-.. ...|.+-|++. ..++..+.+|.+.|++|+|.|. ...|.|||.|...-+||..++..
T Consensus       258 mATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~  322 (364)
T KOG0290|consen  258 MATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPR  322 (364)
T ss_pred             HhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccc
Confidence            777543 45788899765 5678889999999999999995 66799999999999999866544

>KOG2110|consensus

Probab=99.75  E-value=2.9e-15  Score=124.03  Aligned_cols=218  Identities=14%  Similarity=0.228  Sum_probs=157.4

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC--CeEEEEECCCcc
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD--CTCALWDVESSQ   98 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~   98 (320)
                      .+..+.|..+...|..|+.|| .++|..+..+.   .... ......|.-.-|+.  ..++..+.+  +.+++++...+.
T Consensus         7 ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k---~~~~-~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~   79 (391)
T KOG2110|consen    7 TINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEK---CFSK-DTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKT   79 (391)
T ss_pred             ceeeeeeccceeEEEccCCCc-eeEEecCchHH---hhcc-cCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCc
Confidence            345556888998999999988 67776542111   1111 11112222233443  355544433  468888887776


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---Cccc-----------------cCCC
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---HNLI-----------------TDDK  158 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---~~~~-----------------~~d~  158 (320)
                      .+..+. ...+|.++.+.    -+.|+.+-.+ .|.+||+++.+.+.++...   ...+                 ...|
T Consensus        80 ~ICe~~-fpt~IL~VrmN----r~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~G  153 (391)
T KOG2110|consen   80 TICEIF-FPTSILAVRMN----RKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSG  153 (391)
T ss_pred             eEEEEe-cCCceEEEEEc----cceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCc
Confidence            665554 34567666653    2455555444 4999999988776655322   1111                 1357


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCe-EEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT-CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      .|.+||..+-+++..+..|.+++.+++|+|+|.+||++|+.|+ ||++.+.+++.+..|........+.+++|+|++++|
T Consensus       154 dV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L  233 (391)
T KOG2110|consen  154 DVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFL  233 (391)
T ss_pred             eEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeE
Confidence            8999999999999999999999999999999999999999887 799999999999988887777778899999999999


Q ss_pred             EEEeCCCeEEEEcC
Q psy14961        238 FAGYNDYTINVWDS  251 (320)
Q Consensus       238 ~~g~~dg~v~~wd~  251 (320)
                      ++.++.++|++|.+
T Consensus       234 ~~sS~TeTVHiFKL  247 (391)
T KOG2110|consen  234 AASSNTETVHIFKL  247 (391)
T ss_pred             EEecCCCeEEEEEe
Confidence            99999999999964

>KOG1007|consensus

Probab=99.74  E-value=1.8e-16  Score=127.23  Aligned_cols=227  Identities=21%  Similarity=0.316  Sum_probs=157.9

Q ss_pred             CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE-EeCC-------CeEEEEECCCc---------ceee
Q psy14961         39 LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT-GSGD-------CTCALWDVESS---------QLLQ  101 (320)
Q Consensus        39 ~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~d-------g~v~iwd~~~~---------~~~~  101 (320)
                      .|+.|.+.+++.+.. ....+.+..|.+.|+.+.-+|..+.+++ +..+       -.+.||.+...         +++.
T Consensus        38 ~dNqVhll~~d~e~s-~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~  116 (370)
T KOG1007|consen   38 EDNQVHLLRLDSEGS-ELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVA  116 (370)
T ss_pred             CcceeEEEEecCccc-hhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhh
Confidence            367788877764332 2334456677888998887776655544 3321       35678987432         2233


Q ss_pred             ecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE-EEeccCCccccCCCeEEEEECcCCeeeeeecCCCC
Q psy14961        102 SFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV-QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQS  179 (320)
Q Consensus       102 ~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~-~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~  179 (320)
                      .+. .+.+.+.|+.|.|  ++..+++-. |..|.+|++..+..+ ..+...                      .-..+..
T Consensus       117 ~Ldteavg~i~cvew~P--ns~klasm~-dn~i~l~~l~ess~~vaev~ss----------------------~s~e~~~  171 (370)
T KOG1007|consen  117 SLDTEAVGKINCVEWEP--NSDKLASMD-DNNIVLWSLDESSKIVAEVLSS----------------------ESAEMRH  171 (370)
T ss_pred             cCCHHHhCceeeEEEcC--CCCeeEEec-cCceEEEEcccCcchheeeccc----------------------ccccccc
Confidence            333 4556888999987  466787765 788999999776432 111000                      0011344


Q ss_pred             CeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCC-Ce
Q psy14961        180 DVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLK-CC  255 (320)
Q Consensus       180 ~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~-~~  255 (320)
                      ..++-+|+|  +|+.+++.+ |+++..||+++......+.... ..-+..+.|+|+-+ +|++|+.||.|+|||.+. ..
T Consensus       172 ~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAH-gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~  249 (370)
T KOG1007|consen  172 SFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAH-GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF  249 (370)
T ss_pred             eecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhh-cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc
Confidence            567788998  577777665 8899999999866554443322 12357899999876 678999999999999764 56


Q ss_pred             EEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeec
Q psy14961        256 RVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++.++.+|..+|+++.|+| ..+++.|||.|..+-+|-.
T Consensus       250 pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca  288 (370)
T KOG1007|consen  250 PVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA  288 (370)
T ss_pred             cccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence            7889999999999999999 6788999999999998874

>KOG2919|consensus

Probab=99.74  E-value=1.5e-16  Score=129.58  Aligned_cols=211  Identities=22%  Similarity=0.373  Sum_probs=151.7

Q ss_pred             CeEeecccceeEEEEEe--Ccc---ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc----ccccccCeEEE
Q psy14961          1 MIIWDGLTQTKEHSVTM--PAT---WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT----VATHTSFISCC   71 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~--~~~---~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~----~~~h~~~v~~~   71 (320)
                      |++||..+++...++.+  |.+   .-.+++|+|||+.|++| ..+.|++||+.+.+.......+    -.+..+.+.|.
T Consensus       135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~  213 (406)
T KOG2919|consen  135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCF  213 (406)
T ss_pred             eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeee
Confidence            68999999998776542  322   34579999999999877 4688999998654322221111    12346788899


Q ss_pred             EecCCCC-EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCc-EEEEec
Q psy14961         72 IFPNSDQ-QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGY-CVQSFE  148 (320)
Q Consensus        72 ~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~-~~~~~~  148 (320)
                      .|+|... .++.|+....+-||.-..+.++..+.+|.+.|+-+.+++  +|+.|++|.. |..|..||++... .+..+ 
T Consensus       214 a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~e--dGn~lfsGaRk~dkIl~WDiR~~~~pv~~L-  290 (406)
T KOG2919|consen  214 AFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCE--DGNKLFSGARKDDKILCWDIRYSRDPVYAL-  290 (406)
T ss_pred             eccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEecc--CcCeecccccCCCeEEEEeehhccchhhhh-
Confidence            9988765 788888889999999888999999999999999998865  6889999876 6678889987532 22222 


Q ss_pred             cCCccccCCCeEEEEECcCCeeeeeecCCCCC---eEEEEEcCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCcceee
Q psy14961        149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD---VNSVKFHPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDSILFG  224 (320)
Q Consensus       149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~  224 (320)
                                                ..|...   =--....|.|++|++|+.||.|++||+.. +..+..+.....  .
T Consensus       291 --------------------------~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd--~  342 (406)
T KOG2919|consen  291 --------------------------ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSD--T  342 (406)
T ss_pred             --------------------------hhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccc--c
Confidence                                      222221   11245678999999999999999999987 443433333221  3


Q ss_pred             eEEEEEecCCcEEEEEeCC
Q psy14961        225 ATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       225 ~~~~~~s~~~~~l~~g~~d  243 (320)
                      +..++++|-=.++|+++..
T Consensus       343 vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  343 VNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ccceecCcccceeeeccCc
Confidence            4678889987788887754

>KOG0321|consensus

Probab=99.73  E-value=3.5e-16  Score=137.52  Aligned_cols=218  Identities=23%  Similarity=0.329  Sum_probs=154.9

Q ss_pred             CCEEEEEeCCCeEEEEECCCcce------eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE--ec
Q psy14961         77 DQQILTGSGDCTCALWDVESSQL------LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS--FE  148 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~--~~  148 (320)
                      ...|+.+.+||.|.++|......      +..+..|...|.++.++|  ....|++++.|.++++||++.+.+...  +-
T Consensus        64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap--ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~  141 (720)
T KOG0321|consen   64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP--GESLLVSASGDSTIRPWDVKTSRLVGGRLNL  141 (720)
T ss_pred             cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC--CceeEEEccCCceeeeeeeccceeecceeec
Confidence            34688999999999999765322      345678999999998877  346899999999999999998877654  55


Q ss_pred             cCCccc----------------cCCCeEEEEECcCCee---------------------------eeeecCCCCCeEE--
Q psy14961        149 GHHNLI----------------TDDKLVNIWDMRTGYC---------------------------VQSFEGHQSDVNS--  183 (320)
Q Consensus       149 ~~~~~~----------------~~d~~i~iwd~~~~~~---------------------------~~~~~~~~~~v~~--  183 (320)
                      +|...+                ..|+.|.+||++-...                           +...+.+...|.+  
T Consensus       142 GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssv  221 (720)
T KOG0321|consen  142 GHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSV  221 (720)
T ss_pred             ccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeee
Confidence            554322                3589999999864220                           1112234445555  


Q ss_pred             -EEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEe---------cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        184 -VKFHPSGDAVATGSD-DATCRLFDLRADKEVACYK---------KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       184 -v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                       +-+..|...||++++ |+.|++||++.........         ......+...+..+..|++|++.+.|+.|.+|++.
T Consensus       222 Tvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~  301 (720)
T KOG0321|consen  222 TVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMR  301 (720)
T ss_pred             EEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEecc
Confidence             666778889999887 9999999998654321111         11123456677777888999999999999999986


Q ss_pred             CC--eEEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        253 KC--CRVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       253 ~~--~~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +.  .++..+.+|-.  .-..=..+||+.+|+||+.|....+|...+.
T Consensus       302 s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~  349 (720)
T KOG0321|consen  302 SLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSP  349 (720)
T ss_pred             ccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCc
Confidence            53  34455555532  1223356899999999999999999986443

>KOG0290|consensus

Probab=99.72  E-value=1.6e-15  Score=121.88  Aligned_cols=219  Identities=19%  Similarity=0.310  Sum_probs=154.5

Q ss_pred             CccceEEEEEcCCCC-----EEEEecCCCeEEEEEecccCCcccccccc-----cccccCeEEEEecC-CCCEEEEEeCC
Q psy14961         18 PATWVMACAYAPSGS-----VVASGGLDNKVTVYAIALEDDSSAKKKTV-----ATHTSFISCCIFPN-SDQQILTGSGD   86 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~-----~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~~l~s~~~d   86 (320)
                      |+-+++.+.|.|+..     +|||.+  ..+++|.+..++........+     ..+.+++++..|.. +.++|.+.+-|
T Consensus        95 ~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD  172 (364)
T KOG0290|consen   95 HPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID  172 (364)
T ss_pred             CCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc
Confidence            445788999998763     566654  479999987543332222222     24567888888854 56788899999


Q ss_pred             CeEEEEECCCcce---eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-cc---CCc-------
Q psy14961         87 CTCALWDVESSQL---LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EG---HHN-------  152 (320)
Q Consensus        87 g~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~~---~~~-------  152 (320)
                      -+..|||++++..   ..++-+|..+|+.++|.-.. -+.|++.+.||++|+||++.......+ ++   +..       
T Consensus       173 TTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s-~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn  251 (364)
T KOG0290|consen  173 TTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGS-RDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN  251 (364)
T ss_pred             CeEEEEEEeeccccceeeEEEecCcceeEEEeccCc-cceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence            9999999998743   45567899999999997532 368999999999999999875432211 11   111       


Q ss_pred             ---------cccCCCeEEEEECcC-CeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCee------EeE
Q psy14961        153 ---------LITDDKLVNIWDMRT-GYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKE------VAC  215 (320)
Q Consensus       153 ---------~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~------~~~  215 (320)
                               +..+...|.+.|+|. ..++..+.+|+..|+.++|.|. +..+.+|+.|..+.+||+.+...      +..
T Consensus       252 kqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPila  331 (364)
T KOG0290|consen  252 KQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILA  331 (364)
T ss_pred             cCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhh
Confidence                     112456788999986 5688899999999999999996 46799999999999999975322      111


Q ss_pred             EecCcceeeeEEEEEec-CCcEEEEEeC
Q psy14961        216 YKKDSILFGATSVDFSV-SGRLLFAGYN  242 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~-~~~~l~~g~~  242 (320)
                      +..   ...+..+.|+| .+..++.++.
T Consensus       332 y~a---~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  332 YTA---GGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             hhc---cceeeeeeecccCCCEEEEEec
Confidence            221   12356778875 3456666653

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=1.4e-15  Score=137.29  Aligned_cols=232  Identities=15%  Similarity=0.121  Sum_probs=150.7

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |.+||..... ...+..+...+.+..|+|||+.|+.++.+   ..|.+||+....  ......+.+|   .....|++++
T Consensus       186 i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~--~~~l~~~~g~---~~~~~wSPDG  259 (429)
T PRK01742        186 VRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA--RKVVASFRGH---NGAPAFSPDG  259 (429)
T ss_pred             EEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc--eEEEecCCCc---cCceeECCCC
Confidence            3577764333 33445566788999999999999987654   368899875321  1112223333   3467899999


Q ss_pred             CEEEEEe-CCCeEEEE--ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         78 QQILTGS-GDCTCALW--DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        78 ~~l~s~~-~dg~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                      +.|+.++ .+|.+.||  |+.++.. ..+..+...+....|  +++|+.++.++ .++..++|++....           
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~w--SpDG~~i~f~s~~~g~~~I~~~~~~~-----------  325 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSW--SPDGQSILFTSDRSGSPQVYRMSASG-----------  325 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEE--CCCCCEEEEEECCCCCceEEEEECCC-----------
Confidence            9887764 68876666  6655554 344445555555666  55688776554 56777777653211           


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                                    +.. ..+ .+..  .+.+|+|+|++++.++.++ +.+||+.+++........    ...+..|+|+
T Consensus       326 --------------~~~-~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~----~~~~~~~sPd  382 (429)
T PRK01742        326 --------------GGA-SLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF----LDESPSISPN  382 (429)
T ss_pred             --------------CCe-EEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC----CCCCceECCC
Confidence                          000 001 1221  3468999999998887765 556999877643222111    1245679999


Q ss_pred             CcEEEEEeCCCeEEEEcC--CCCeEEEEeecCCCceeEEEECcC
Q psy14961        234 GRLLFAGYNDYTINVWDS--LKCCRVNHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~--~~~~~~~~~~~h~~~i~~i~~s~~  275 (320)
                      |++|+.++.++...+|++  ..+.....+.+|.+.+...+|||-
T Consensus       383 G~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        383 GIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             CCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence            999999999988888764  345667778888888999999984

>KOG1188|consensus

Probab=99.72  E-value=5.1e-16  Score=127.21  Aligned_cols=190  Identities=19%  Similarity=0.298  Sum_probs=144.7

Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      ..++++...|.|++||..+++.+..++++...+..+.|.....++.+++++.||.|++||++.......           
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~-----------  109 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESAR-----------  109 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhh-----------
Confidence            468888899999999999999999999999999999987654568999999999999999987542211           


Q ss_pred             CeEEEEECcCCeeeeeecCCC-CCeEEEEEcCCCCEEEEeeC----CCeEEEEECCCCee-EeEEecCcceeeeEEEEEe
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQ-SDVNSVKFHPSGDAVATGSD----DATCRLFDLRADKE-VACYKKDSILFGATSVDFS  231 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~p~g~~l~s~s~----dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s  231 (320)
                                    ....+++ .+-.|++..-.++.+++|.+    |-.+.+||++..+. +..+... ..-.++++.|+
T Consensus       110 --------------~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eS-H~DDVT~lrFH  174 (376)
T KOG1188|consen  110 --------------ISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNES-HNDDVTQLRFH  174 (376)
T ss_pred             --------------eeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhh-ccCcceeEEec
Confidence                          1122333 34567777667777877753    66899999998766 4433221 12257899999


Q ss_pred             cCC-cEEEEEeCCCeEEEEcCCCCeE---EEEeecCCCceeEEEECcCC-CeEEEecCCCceEeeec
Q psy14961        232 VSG-RLLFAGYNDYTINVWDSLKCCR---VNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLRDEES  293 (320)
Q Consensus       232 ~~~-~~l~~g~~dg~v~~wd~~~~~~---~~~~~~h~~~i~~i~~s~~~-~~l~s~s~D~~ir~~~~  293 (320)
                      |.. .+|++|+.||-|.+||+.....   +.+...|...|.++.|..++ +.+..-++..+..+|+.
T Consensus       175 P~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~el  241 (376)
T KOG1188|consen  175 PSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL  241 (376)
T ss_pred             CCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence            965 5999999999999999765432   33345678889999999987 34788889999999985

>KOG0649|consensus

Probab=99.70  E-value=1.2e-14  Score=114.16  Aligned_cols=238  Identities=20%  Similarity=0.256  Sum_probs=157.9

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEeccc----CCc--ccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALE----DDS--SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~----~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      ..|.+-+++|.+++|++|+.+|.|.++.+..-    .++  ....-...+|+++++.++|.  ..+|++|+ ||.|+=|.
T Consensus        11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~   87 (325)
T KOG0649|consen   11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWE   87 (325)
T ss_pred             HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEee
Confidence            35667789999999999999999999987421    111  11222347899999999997  34677766 69999886


Q ss_pred             CCCcc------eee--ecccCc-----cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         94 VESSQ------LLQ--SFHGHT-----GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        94 ~~~~~------~~~--~~~~~~-----~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      .+...      .+.  ..+.|.     -+|..+-+.|.  .+.++.++.|+.++.||+++|+.                 
T Consensus        88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~--enSi~~AgGD~~~y~~dlE~G~i-----------------  148 (325)
T KOG0649|consen   88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPS--ENSILFAGGDGVIYQVDLEDGRI-----------------  148 (325)
T ss_pred             ehhhhhhccchhhhhhcCccccCcccCCccceeEeccC--CCcEEEecCCeEEEEEEecCCEE-----------------
Confidence            53211      111  111122     23455555444  44566666788888887776654                 


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce------eeeEEEEEecCC
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL------FGATSVDFSVSG  234 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~s~~~  234 (320)
                                ..+++||++-|.++.--.....+++|++||++++||.++.+.+..+......      .+..-.+..-+.
T Consensus       149 ----------~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~e  218 (325)
T KOG0649|consen  149 ----------QREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNE  218 (325)
T ss_pred             ----------EEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccC
Confidence                      4456778888999988555567899999999999999999887665432211      111124455567


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+|++|+ .-.+.+|.+...++...+ +-.+.+..+.|-.|  .++++|.-+.+.-|..
T Consensus       219 dWlvCGg-Gp~lslwhLrsse~t~vf-pipa~v~~v~F~~d--~vl~~G~g~~v~~~~l  273 (325)
T KOG0649|consen  219 DWLVCGG-GPKLSLWHLRSSESTCVF-PIPARVHLVDFVDD--CVLIGGEGNHVQSYTL  273 (325)
T ss_pred             ceEEecC-CCceeEEeccCCCceEEE-ecccceeEeeeecc--eEEEeccccceeeeee
Confidence            7888876 446999998876665443 34556777888665  6777776666665553

>KOG0642|consensus

Probab=99.70  E-value=6.9e-16  Score=134.00  Aligned_cols=237  Identities=19%  Similarity=0.246  Sum_probs=157.9

Q ss_pred             CeEeeccc--------ceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC------ccccccccccccc
Q psy14961          1 MIIWDGLT--------QTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD------SSAKKKTVATHTS   66 (320)
Q Consensus         1 ~~~W~~~~--------~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~------~~~~~~~~~~h~~   66 (320)
                      |++|++++        .+.+..+..|..+|.|+++.+.+..+++|+.||+|+.|++....+      .......+.+|..
T Consensus       318 lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtd  397 (577)
T KOG0642|consen  318 LKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTD  397 (577)
T ss_pred             hhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceecccc
Confidence            46898843        224456778999999999999999999999999999997753221      1223456789999


Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccce--eEEEEeeCCCCCEEEEEeCCCeEEEEe---CCCC
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGEL--MDLDLAPSETGNTFVSGSSDKLVNIWD---MRTG  141 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~s~~~dg~i~lwd---~~~~  141 (320)
                      .|+.+.++....+|++++.||++++|+.....+ ..+.......  .++++..+    ..+-...+..+..++   +..+
T Consensus       398 avw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss----~~a~~~~s~~~~~~~~~~~ev~  472 (577)
T KOG0642|consen  398 AVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSS----RPAHSLASFRFGYTSIDDMEVV  472 (577)
T ss_pred             ceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccc----hhHhhhhhcccccccchhhhhh
Confidence            999999998888999999999999999866555 3332222111  12232211    111111122222222   2222


Q ss_pred             cEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc
Q psy14961        142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       142 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~  221 (320)
                      +.+..+...                .    .........++-+.++|.+...+++.+|+.|+++|..+++.+.....+. 
T Consensus       473 s~~~~~~s~----------------~----~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~-  531 (577)
T KOG0642|consen  473 SDLLIFESS----------------A----SPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHK-  531 (577)
T ss_pred             hheeecccc----------------C----CCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeecc-
Confidence            211111100                0    0001122357788999999999999999999999999888765433332 


Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE  264 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~  264 (320)
                       ..++++++.|+|.+|++|+.||.+++|.......+....+|.
T Consensus       532 -~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  532 -DSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             -ceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence             346889999999999999999999999876655555555553

>KOG0644|consensus

Probab=99.69  E-value=3.8e-17  Score=147.49  Aligned_cols=227  Identities=27%  Similarity=0.470  Sum_probs=177.8

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ...+.+|...|+|..|...+.++++|+.|..|+||..++..++...++|.+.+..+++  +.+..++++++.|..|++|-
T Consensus       183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlav--s~~n~~iaaaS~D~vIrvWr  260 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAV--SSNNTMIAAASNDKVIRVWR  260 (1113)
T ss_pred             HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhcc--chhhhhhhhcccCceEEEEe
Confidence            3456789999999999999999999999999999999999999999999999998865  33456888999999999999


Q ss_pred             CCCCcEEEEeccCCccc-----------cCCCeEEEEECcCCeeeee---e-cCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961        138 MRTGYCVQSFEGHHNLI-----------TDDKLVNIWDMRTGYCVQS---F-EGHQSDVNSVKFHPSGDAVATGSDDATC  202 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~-----------~~d~~i~iwd~~~~~~~~~---~-~~~~~~v~~v~~~p~g~~l~s~s~dg~i  202 (320)
                      +.++..+..+.+|...+           .+|+++++||.+-...+..   . ......+.++.|..++..+++++.|+.-
T Consensus       261 l~~~~pvsvLrghtgavtaiafsP~~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea  340 (1113)
T KOG0644|consen  261 LPDGAPVSVLRGHTGAVTAIAFSPRASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEA  340 (1113)
T ss_pred             cCCCchHHHHhccccceeeeccCccccCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCccc
Confidence            99998888888887554           4689999999872111111   0 0123467889999999999999999999


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEe-cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEE
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFS-VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFS  280 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~  280 (320)
                      ..|......   . ......+    +.++ ....+.+++-.+..+++|++..+.....+.+|.+.+..+.++| |.+...
T Consensus       341 ~n~e~~~l~---~-~~~~lif----~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~m  412 (1113)
T KOG0644|consen  341 RNHEFEQLA---W-RSNLLIF----VTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAM  412 (1113)
T ss_pred             ccchhhHhh---h-hccceEE----EeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhh
Confidence            998764211   0 0000000    0111 1225666777788899999999988998999999999999999 777788


Q ss_pred             EecCCCceEeeecc
Q psy14961        281 SGSWDTTLRDEESK  294 (320)
Q Consensus       281 s~s~D~~ir~~~~~  294 (320)
                      ++++||.+-+||+.
T Consensus       413 sag~dgst~iwdi~  426 (1113)
T KOG0644|consen  413 SAGYDGSTIIWDIW  426 (1113)
T ss_pred             hccCCCceEeeecc
Confidence            99999999999963

>KOG1523|consensus

Probab=99.69  E-value=1.1e-14  Score=118.52  Aligned_cols=241  Identities=18%  Similarity=0.220  Sum_probs=173.8

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC-C
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV-E   95 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~-~   95 (320)
                      .-..+|++.+|++|.+.+|.+.....+.||.....+ ......++..|...|+++.|.+..+.|++++.|+.-.+|.. .
T Consensus         8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~-~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~   86 (361)
T KOG1523|consen    8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD-LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPS   86 (361)
T ss_pred             eccCceeeeeecCCCceEEeccCCceEEEEEecCCC-CceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCC
Confidence            345789999999999999999999999999875432 35567788999999999999999999999999999999988 3


Q ss_pred             Cc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         96 SS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        96 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      .+  ++.-.+..++..+.++.++|.  ++.|++|+....|.+|-.+....                   |-+.    ...
T Consensus        87 ~~~WkptlvLlRiNrAAt~V~WsP~--enkFAVgSgar~isVcy~E~ENd-------------------WWVs----Khi  141 (361)
T KOG1523|consen   87 GGTWKPTLVLLRINRAATCVKWSPK--ENKFAVGSGARLISVCYYEQEND-------------------WWVS----KHI  141 (361)
T ss_pred             CCeeccceeEEEeccceeeEeecCc--CceEEeccCccEEEEEEEecccc-------------------eehh----hhh
Confidence            33  334445567888899999764  67999999999888886543210                   0000    001


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEEC-----CCCe-------------eEeEEecCcceeeeEEEEEecCCc
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL-----RADK-------------EVACYKKDSILFGATSVDFSVSGR  235 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~-----~~~~-------------~~~~~~~~~~~~~~~~~~~s~~~~  235 (320)
                      -+.+...|.+++|+|++-.|++||.|+.++++..     +...             .+..+.  .....+..+.|+|+|.
T Consensus       142 kkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~--~~ggwvh~v~fs~sG~  219 (361)
T KOG1523|consen  142 KKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS--SSGGWVHGVLFSPSGN  219 (361)
T ss_pred             CCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc--cCCCceeeeEeCCCCC
Confidence            1235678999999999999999999999999963     1110             011110  1112367899999999


Q ss_pred             EEEEEeCCCeEEEEcCCCCe-EEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        236 LLFAGYNDYTINVWDSLKCC-RVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~-~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      .|+-.+.|.++.+-|..... .+.....-..+..++.|-.+. .++.+++|.
T Consensus       220 ~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~-~vv~ag~~c  270 (361)
T KOG1523|consen  220 RLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISEN-SVVAAGYDC  270 (361)
T ss_pred             EeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCC-ceeecCCCC
Confidence            99999999999998876553 233333333666677666543 455566663

>KOG0322|consensus

Probab=99.69  E-value=1.1e-15  Score=121.37  Aligned_cols=223  Identities=19%  Similarity=0.314  Sum_probs=155.3

Q ss_pred             CeEeecccceeEEEEE-eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC---------------------ccccc
Q psy14961          1 MIIWDGLTQTKEHSVT-MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD---------------------SSAKK   58 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~-~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~---------------------~~~~~   58 (320)
                      +++|++++........ .+...|+.+.--|++ .+.+=++|..+.+|+++....                     .....
T Consensus        37 V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d-~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~e  115 (323)
T KOG0322|consen   37 VKMWVLQTERDLPLIRLFGRLFITNLQSIPND-SLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSE  115 (323)
T ss_pred             EEEEEeecCccchhhhhhccceeeceeecCCc-chhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcch
Confidence            4689999888776666 566788999888874 678888999999998864100                     00000


Q ss_pred             ccc----------------------------cccccCeEEEEecC-CCC--EEEEEeCCCeEEEEECCCc----------
Q psy14961         59 KTV----------------------------ATHTSFISCCIFPN-SDQ--QILTGSGDCTCALWDVESS----------   97 (320)
Q Consensus        59 ~~~----------------------------~~h~~~v~~~~~~~-~~~--~l~s~~~dg~v~iwd~~~~----------   97 (320)
                      ..+                            ....+.+.|..+.. .+.  .+++|.++|.|.+||+.++          
T Consensus       116 qll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~  195 (323)
T KOG0322|consen  116 QLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSS  195 (323)
T ss_pred             hheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccccc
Confidence            000                            01124455555432 222  4678889999999999887          


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCC
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH  177 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~  177 (320)
                      +.......|..+|.++.+++.-  +.=++|+.+..+..|+++...-...+         .+            ...+  -
T Consensus       196 kv~~~~ash~qpvlsldyas~~--~rGisgga~dkl~~~Sl~~s~gslq~---------~~------------e~~l--k  250 (323)
T KOG0322|consen  196 KVESPNASHKQPVLSLDYASSC--DRGISGGADDKLVMYSLNHSTGSLQI---------RK------------EITL--K  250 (323)
T ss_pred             ccccchhhccCcceeeeechhh--cCCcCCCccccceeeeeccccCcccc---------cc------------eEEe--c
Confidence            3333445688899888887543  34467777778888877532100000         00            0111  2


Q ss_pred             CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      ...|..+.+-||++.+|+++.|+.|++|..++..++.....+.  .++.+++|+|+...+|.++.|++|.+|++
T Consensus       251 npGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHs--agvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  251 NPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHS--AGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             CCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhh--cceeEEEeCCCCchhhhccCCceEEeeec
Confidence            2357788999999999999999999999999999887776665  35789999999999999999999999974

>KOG1240|consensus

Probab=99.68  E-value=1.9e-14  Score=135.18  Aligned_cols=263  Identities=13%  Similarity=0.135  Sum_probs=165.3

Q ss_pred             cceeEEEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEeccc-CC--cccccccccccccCeEEEEecCCCCEEEEE
Q psy14961          8 TQTKEHSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALE-DD--SSAKKKTVATHTSFISCCIFPNSDQQILTG   83 (320)
Q Consensus         8 ~~~~~~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~-~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~   83 (320)
                      ++...+++..|...|..++.+++. .++++||.||+|++|+...- ..  ......++......+.++.+-..+..++.+
T Consensus      1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred             cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence            366777777788888888887655 99999999999999997421 11  111122333335667777777778899999


Q ss_pred             eCCCeEEEEECCCc--c-----eeeecccCc-cceeEE-EEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961         84 SGDCTCALWDVESS--Q-----LLQSFHGHT-GELMDL-DLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        84 ~~dg~v~iwd~~~~--~-----~~~~~~~~~-~~v~~~-~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      +.||.|++.+++-.  +     .......+. +.+..+ ++........++.+...+.|..||+++......        
T Consensus      1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~-------- 1188 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWR-------- 1188 (1431)
T ss_pred             cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHh--------
Confidence            99999999988652  1     111111122 122111 111111112555666666666777655321111        


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec--
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV--  232 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--  232 (320)
                                +       ......+.|++++.+|.+.+++.|...|.+.+||++-+.++..+..... ..+..+..+|  
T Consensus      1189 ----------l-------k~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-~~i~~v~~~~~~ 1250 (1431)
T KOG1240|consen 1189 ----------L-------KNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-APIRHVWLCPTY 1250 (1431)
T ss_pred             ----------h-------hcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc-CCcceEEeeccC
Confidence                      1       0112345799999999999999999999999999998887766654332 3344444443  


Q ss_pred             -CCcEEEEE-e-CCCeEEEEcCCCCeEEEEeecC-------------------CCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        233 -SGRLLFAG-Y-NDYTINVWDSLKCCRVNHLMGH-------------------ENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       233 -~~~~l~~g-~-~dg~v~~wd~~~~~~~~~~~~h-------------------~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                       .....+++ . ..+.|.+|++.++.+...+..-                   .-+....++..-+..+.+|+.|..||.
T Consensus      1251 ~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~ 1330 (1431)
T KOG1240|consen 1251 PQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRK 1330 (1431)
T ss_pred             CCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceee
Confidence             33454444 3 5778999999887666555422                   111222333334568999999999999


Q ss_pred             eecchH
Q psy14961        291 EESKNR  296 (320)
Q Consensus       291 ~~~~~~  296 (320)
                      ||...+
T Consensus      1331 wD~~~p 1336 (1431)
T KOG1240|consen 1331 WDPTRP 1336 (1431)
T ss_pred             ccCCCc
Confidence            996544

>KOG1524|consensus

Probab=99.67  E-value=4.3e-15  Score=128.52  Aligned_cols=233  Identities=13%  Similarity=0.243  Sum_probs=155.0

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc-cc---cccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK-TV---ATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~-~~---~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      ..-|.++.|+.....+.+++.+..+.-|++..+........ .+   ..|-.+- +..=......++.++.||.+.|-+ 
T Consensus        14 ~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~r-s~~~g~~~d~~~i~s~DGkf~il~-   91 (737)
T KOG1524|consen   14 SEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGR-SSGGGKGSDTLLICSNDGRFVILN-   91 (737)
T ss_pred             ceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCcccccccc-ccCCCCCcceEEEEcCCceEEEec-
Confidence            34566888988887777666555555555543221111100 00   0121100 000011234678888999999987 


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      ..++......+|.+.+.+-.|  +++|.-|+++++||.|++|.-.                            |..-.++
T Consensus        92 k~~rVE~sv~AH~~A~~~gRW--~~dGtgLlt~GEDG~iKiWSrs----------------------------GMLRStl  141 (737)
T KOG1524|consen   92 KSARVERSISAHAAAISSGRW--SPDGAGLLTAGEDGVIKIWSRS----------------------------GMLRSTV  141 (737)
T ss_pred             ccchhhhhhhhhhhhhhhccc--CCCCceeeeecCCceEEEEecc----------------------------chHHHHH
Confidence            446666777889998877777  4578899999999999999732                            2222233


Q ss_pred             cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      -....+|.|++|.|+.+.++-|. .+.+.|=.+.....+-....+...  +.+++|++.+.++++|++|...++||.. +
T Consensus       142 ~Q~~~~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGi--iL~~~W~~~s~lI~sgGED~kfKvWD~~-G  217 (737)
T KOG1524|consen  142 VQNEESIRCARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGL--VLSLSWSTQSNIIASGGEDFRFKIWDAQ-G  217 (737)
T ss_pred             hhcCceeEEEEECCCCCceEEec-CCeEEEeecccccceeEEeccCcE--EEEeecCccccceeecCCceeEEeeccc-C
Confidence            33556899999999987665554 345666655544333333333222  4688999999999999999999999965 4


Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      ..+.+-.+|+-+|++++|+|| +.++.+|. .+.|
T Consensus       218 ~~Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R  250 (737)
T KOG1524|consen  218 ANLFTSAAEEYAITSVAFNPE-KDYLLWSY-NTAR  250 (737)
T ss_pred             cccccCChhccceeeeeeccc-cceeeeee-eeee
Confidence            566667889999999999999 78888887 4566

>KOG0649|consensus

Probab=99.67  E-value=6.9e-14  Score=109.98  Aligned_cols=222  Identities=20%  Similarity=0.278  Sum_probs=145.4

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc----cccccc-----cCeEEEEecCCCCEEEEEeCC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK----TVATHT-----SFISCCIFPNSDQQILTGSGD   86 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~----~~~~h~-----~~v~~~~~~~~~~~l~s~~~d   86 (320)
                      -.|..+|+.++|.  ..+|++|+ ||.|+-|.-.-..++...+.    ....|.     ..|.++...|..+.++.++.|
T Consensus        59 qahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD  135 (325)
T KOG0649|consen   59 QAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGD  135 (325)
T ss_pred             cccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCC
Confidence            4677889999998  33677776 59999886532211111110    112222     446777777777777777799


Q ss_pred             CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------------
Q psy14961         87 CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------------  154 (320)
Q Consensus        87 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------------  154 (320)
                      +.+..||+++++..+.+++|.+-+.++..- + ....+++|++||.+|+||+++++++..+....+.-            
T Consensus       136 ~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R-~-~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wiga  213 (325)
T KOG0649|consen  136 GVIYQVDLEDGRIQREYRGHTDYVHSVVGR-N-ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGA  213 (325)
T ss_pred             eEEEEEEecCCEEEEEEcCCcceeeeeeec-c-cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEE
Confidence            999999999999999999999999988642 2 23479999999999999999999988775433210            


Q ss_pred             ----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceee
Q psy14961        155 ----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFG  224 (320)
Q Consensus       155 ----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~  224 (320)
                                .....+.+|.++..++...++ ....+..+.|-.  +.++++++.+.+.-|.+.. ......+.....  
T Consensus       214 la~~edWlvCGgGp~lslwhLrsse~t~vfp-ipa~v~~v~F~~--d~vl~~G~g~~v~~~~l~G-vl~a~ip~~s~~--  287 (325)
T KOG0649|consen  214 LAVNEDWLVCGGGPKLSLWHLRSSESTCVFP-IPARVHLVDFVD--DCVLIGGEGNHVQSYTLNG-VLQANIPVESTA--  287 (325)
T ss_pred             EeccCceEEecCCCceeEEeccCCCceEEEe-cccceeEeeeec--ceEEEeccccceeeeeecc-EEEEeccCCccc--
Confidence                      123457788888877666554 334566677764  4677788778888887752 222222222211  


Q ss_pred             eEEEEE--ecCCcEEEEEeCCCeEEEE
Q psy14961        225 ATSVDF--SVSGRLLFAGYNDYTINVW  249 (320)
Q Consensus       225 ~~~~~~--s~~~~~l~~g~~dg~v~~w  249 (320)
                      ..+..+  +| -++|..++..+.+.++
T Consensus       288 c~s~s~~~~p-~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  288 CYSASWQTSP-IKFISIAGFSNKLHIL  313 (325)
T ss_pred             eeeecccCCc-eEEEEecccceeeeee
Confidence            122222  23 3455555666666665

>KOG1310|consensus

Probab=99.67  E-value=1e-15  Score=132.64  Aligned_cols=226  Identities=22%  Similarity=0.365  Sum_probs=158.3

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec-ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ..++.+|.+=|.|+.|..+|.+|++|+.|-.+.|||+-..+++..+ .+|...|.++.|.|..+...+++|..|..|+++
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf  122 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF  122 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence            4578899999999999999999999999999999998776666544 589999999999999888899999999999999


Q ss_pred             eCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        137 DMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       137 d~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      |+...+-         ...+++.        .....-+..|...|..++-.|++ +.+-++++||+++-+|++....  +
T Consensus       123 dl~~~~~---------~~~d~~~--------~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~--c  183 (758)
T KOG1310|consen  123 DLDSSKE---------GGMDHGM--------EETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHV--C  183 (758)
T ss_pred             ecccccc---------cccccCc--------cchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCcc--C
Confidence            9864210         0011111        01122234588889999999998 7889999999999999986321  1


Q ss_pred             EecC----------cceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCC--------Ce----------EEEEe-ecCC-
Q psy14961        216 YKKD----------SILFGATSVDFSVSG-RLLFAGYNDYTINVWDSLK--------CC----------RVNHL-MGHE-  264 (320)
Q Consensus       216 ~~~~----------~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~--------~~----------~~~~~-~~h~-  264 (320)
                      .+..          .-....-++.++|.. .+||+|++|--.++||...        +.          .+..+ .+|. 
T Consensus       184 ~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlk  263 (758)
T KOG1310|consen  184 NPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLK  263 (758)
T ss_pred             CccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCcccc
Confidence            0000          011234567888865 4889999999999999321        00          12222 1232 


Q ss_pred             ----------CceeEEEECcCCCeE-EEecCCCceEeee--cchHhhhheee
Q psy14961        265 ----------NRVSCLQVSPDGTAF-SSGSWDTTLRDEE--SKNRYVQYLLR  303 (320)
Q Consensus       265 ----------~~i~~i~~s~~~~~l-~s~s~D~~ir~~~--~~~~~~~~~~~  303 (320)
                                ..++-++|+|+|.-| ++=+. -.+.+++  -++++.+|++.
T Consensus       264 n~~gn~~~~~~~~t~vtfnpNGtElLvs~~g-EhVYlfdvn~~~~~~~y~~~  314 (758)
T KOG1310|consen  264 NSQGNLDRYITCCTYVTFNPNGTELLVSWGG-EHVYLFDVNEDKSPTPYFLP  314 (758)
T ss_pred             CcccccccceeeeEEEEECCCCcEEEEeeCC-eEEEEEeecCCCCceeecCc
Confidence                      136788999998754 44333 3455555  34555666655

>KOG0771|consensus

Probab=99.66  E-value=7e-15  Score=123.73  Aligned_cols=200  Identities=17%  Similarity=0.212  Sum_probs=134.5

Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee
Q psy14961         23 MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  102 (320)
                      -+++|+.+|+.|++++.||.+|||+...    -........|...|.++.|+++++.|++-+.| ..+||+++++..++.
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps----~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~  222 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPS----MLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALAR  222 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCc----chhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhh
Confidence            4789999999999999999999998531    12234556788999999999999999999999 999999999966654


Q ss_pred             cccCc--cceeEEEEeeCCCCCEEE---EEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCC
Q psy14961        103 FHGHT--GELMDLDLAPSETGNTFV---SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH  177 (320)
Q Consensus       103 ~~~~~--~~v~~~~~~~~~~~~~l~---s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~  177 (320)
                      .....  .....+.|...+.+..+.   +...-+.|++||+                      .+|+-..--+..+....
T Consensus       223 ~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~----------------------~~w~~~~~l~~~~~~~~  280 (398)
T KOG0771|consen  223 KTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDI----------------------SLWSGSNFLRLRKKIKR  280 (398)
T ss_pred             cCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEe----------------------eeeccccccchhhhhhc
Confidence            33111  111223333332222221   1122233444443                      22322110011111223


Q ss_pred             CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      ...|.+++.+++|+++|.|+.||.|-|++..+-+.+...++. ....++.+.|+|+.+++++-+.+....+.-
T Consensus       281 ~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~a-H~~~VT~ltF~Pdsr~~~svSs~~~~~v~~  352 (398)
T KOG0771|consen  281 FKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEA-HLGFVTGLTFSPDSRYLASVSSDNEAAVTK  352 (398)
T ss_pred             cCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhh-heeeeeeEEEcCCcCcccccccCCceeEEE
Confidence            347899999999999999999999999999877665544433 334578999999999998877777766653

>KOG1538|consensus

Probab=99.66  E-value=6.2e-15  Score=130.60  Aligned_cols=233  Identities=14%  Similarity=0.218  Sum_probs=164.1

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      -|..++|-|||+.|+.+.. ..+.+||.+    .+...+++.+|...|.|++|+.+|+.+++|+.|..|.+|+..-...+
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~n----dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L   88 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTS----DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL   88 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCC----CcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee
Confidence            6788999999998777653 568899874    34566789999999999999999999999999999999986544333


Q ss_pred             eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCC
Q psy14961        101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD  180 (320)
Q Consensus       101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  180 (320)
                      +  ..|...|.|+.|.|-  .+.|++++-+ .+-+|......+..                            . .....
T Consensus        89 k--YSH~D~IQCMsFNP~--~h~LasCsLs-dFglWS~~qK~V~K----------------------------~-kss~R  134 (1081)
T KOG1538|consen   89 K--YSHNDAIQCMSFNPI--THQLASCSLS-DFGLWSPEQKSVSK----------------------------H-KSSSR  134 (1081)
T ss_pred             e--eccCCeeeEeecCch--HHHhhhcchh-hccccChhhhhHHh----------------------------h-hhhee
Confidence            3  248888988888664  4677877653 35566543321100                            0 02346


Q ss_pred             eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec-CcceeeeEEEEEecCCc-----EEEEEeCCCeEEEEcCCCC
Q psy14961        181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-DSILFGATSVDFSVSGR-----LLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~-----~l~~g~~dg~v~~wd~~~~  254 (320)
                      |.+.+|..||.+|+.|-.||+|.+-+-...+.. .+.. ....-.+.++.|+|...     .+++..-..++.+|.+. +
T Consensus       135 ~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~-~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G  212 (1081)
T KOG1538|consen  135 IICCSWTNDGQYLALGMFNGTISIRNKNGEEKV-KIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-G  212 (1081)
T ss_pred             EEEeeecCCCcEEEEeccCceEEeecCCCCcce-EEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-c
Confidence            889999999999999999999999875433333 3332 22223456888988643     56666666677776543 2


Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +.+..-..-.-.-.||.+-|+|.++..||.|+.+.++..+
T Consensus       213 ~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~  252 (1081)
T KOG1538|consen  213 KQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRD  252 (1081)
T ss_pred             eeecccccCCCCchhheeccCCcEEEEccCCCceEEEeec
Confidence            3332111222234689999999999999999999877643

>KOG3881|consensus

Probab=99.66  E-value=2.2e-14  Score=119.64  Aligned_cols=259  Identities=18%  Similarity=0.267  Sum_probs=168.0

Q ss_pred             ceEEEEEcCCC--CEEEEecCCCeEEEEEecccCCcccc--cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         21 WVMACAYAPSG--SVVASGGLDNKVTVYAIALEDDSSAK--KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        21 ~V~~~~~~~~~--~~l~s~~~dg~i~v~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      .|.+++|-.++  +.+...+.+..+..+.+.-.......  .........+|..+..  .+..|++|-.+|.+.+|....
T Consensus        57 ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~--~dg~Litc~~sG~l~~~~~k~  134 (412)
T KOG3881|consen   57 RISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKL--ADGTLITCVSSGNLQVRHDKS  134 (412)
T ss_pred             hhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhh--cCCEEEEEecCCcEEEEeccC
Confidence            46667775444  35555545566666554211111100  0112222344444433  245788999999999998874


Q ss_pred             cc----eeeecccCccceeEEEEeeCCCCCEEEEEeCC--CeEEEEeCCCCcEEEEeccCCccccC---CCeEEEEECcC
Q psy14961         97 SQ----LLQSFHGHTGELMDLDLAPSETGNTFVSGSSD--KLVNIWDMRTGYCVQSFEGHHNLITD---DKLVNIWDMRT  167 (320)
Q Consensus        97 ~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--g~i~lwd~~~~~~~~~~~~~~~~~~~---d~~i~iwd~~~  167 (320)
                      +.    .+..+..+ ..+..+.-++. +...+++|+..  ..+++||+...+.+.+  ...  +..   +-.|-+|    
T Consensus       135 ~d~hss~l~~la~g-~g~~~~r~~~~-~p~Iva~GGke~~n~lkiwdle~~~qiw~--aKN--vpnD~L~LrVPvW----  204 (412)
T KOG3881|consen  135 GDLHSSKLIKLATG-PGLYDVRQTDT-DPYIVATGGKENINELKIWDLEQSKQIWS--AKN--VPNDRLGLRVPVW----  204 (412)
T ss_pred             CccccccceeeecC-CceeeeccCCC-CCceEecCchhcccceeeeecccceeeee--ccC--CCCccccceeeee----
Confidence            32    22222222 33333433332 34577889998  8899999987643322  111  111   1123344    


Q ss_pred             CeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecCCcEEEEEeCCC
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADK-EVACYKKDSILFGATSVDFSVSGRLLFAGYNDY  244 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg  244 (320)
                                   +..+.|-|.  ...||+++.-+.+++||.+.++ ++..+....  ..++++...|+++++++|...|
T Consensus       205 -------------~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E--~~is~~~l~p~gn~Iy~gn~~g  269 (412)
T KOG3881|consen  205 -------------ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE--NPISSTGLTPSGNFIYTGNTKG  269 (412)
T ss_pred             -------------eccceecCCCCCceEEEEecceeEEEecCcccCcceeEecccc--CcceeeeecCCCcEEEEecccc
Confidence                         456777766  6789999999999999998653 455554332  2457788899999999999999


Q ss_pred             eEEEEcCCCCeEEEE-eecCCCceeEEEECcCCCeEEEecCCCceEeeecch--Hhhhheeeeee
Q psy14961        245 TINVWDSLKCCRVNH-LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN--RYVQYLLRSRI  306 (320)
Q Consensus       245 ~v~~wd~~~~~~~~~-~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~--~~~~~~~~~~~  306 (320)
                      .+..||...+..... +.+-.+.|++|..+|..++|||+|-|+.+|++|.++  .++.-|+++++
T Consensus       270 ~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~l  334 (412)
T KOG3881|consen  270 QLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRL  334 (412)
T ss_pred             hhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccc
Confidence            999999998877766 778899999999999999999999999999999765  33333444443

>KOG2110|consensus

Probab=99.65  E-value=1.9e-13  Score=113.37  Aligned_cols=223  Identities=13%  Similarity=0.124  Sum_probs=156.0

Q ss_pred             eEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEE
Q psy14961         68 ISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQ  145 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~  145 (320)
                      +....|..+...|..|+.|| .++|..+......  ....+.+.-+..-.+.  .+++..+.+.  .+++.+.+.+..+.
T Consensus         8 i~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~--~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~IC   82 (391)
T KOG2110|consen    8 INFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCF--SKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTTIC   82 (391)
T ss_pred             eeeeeeccceeEEEccCCCc-eeEEecCchHHhh--cccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCceEE
Confidence            44444766666677777776 5677765533311  1112333334444443  3566555543  58888887665443


Q ss_pred             Ee-----------ccCCccccCCCeEEEEECcCCeeeeeec---CCCCCeEEEEEcCCCCEEEEee--CCCeEEEEECCC
Q psy14961        146 SF-----------EGHHNLITDDKLVNIWDMRTGYCVQSFE---GHQSDVNSVKFHPSGDAVATGS--DDATCRLFDLRA  209 (320)
Q Consensus       146 ~~-----------~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~v~~~p~g~~l~s~s--~dg~i~iwd~~~  209 (320)
                      .+           +...-++.-...|++||+++.+.+.++.   .+...+..+++++.+.++|--+  ..|.|.+||+.+
T Consensus        83 e~~fpt~IL~VrmNr~RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n  162 (391)
T KOG2110|consen   83 EIFFPTSILAVRMNRKRLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN  162 (391)
T ss_pred             EEecCCceEEEEEccceEEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccc
Confidence            32           2222233345569999999998887764   3455576677776677886432  468999999998


Q ss_pred             CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCe-EEEEcCCCCeEEEEeecCC--CceeEEEECcCCCeEEEecCCC
Q psy14961        210 DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYT-INVWDSLKCCRVNHLMGHE--NRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~-v~~wd~~~~~~~~~~~~h~--~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      -+++..+..+..  .+..++|+++|++|||+++.|+ |+++.+.+++++.+|..-.  ..|.+|+|+||+++|+..|..+
T Consensus       163 l~~v~~I~aH~~--~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te  240 (391)
T KOG2110|consen  163 LQPVNTINAHKG--PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE  240 (391)
T ss_pred             ceeeeEEEecCC--ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCC
Confidence            888777665543  3578999999999999999997 7899999999998887543  3689999999999999999999


Q ss_pred             ceEeeecchHh
Q psy14961        287 TLRDEESKNRY  297 (320)
Q Consensus       287 ~ir~~~~~~~~  297 (320)
                      ||.++..+...
T Consensus       241 TVHiFKL~~~~  251 (391)
T KOG2110|consen  241 TVHIFKLEKVS  251 (391)
T ss_pred             eEEEEEecccc
Confidence            99999876664

>KOG1272|consensus

Probab=99.65  E-value=4.1e-16  Score=132.54  Aligned_cols=258  Identities=19%  Similarity=0.282  Sum_probs=179.7

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      +.+.++...=..+.|+.+|.+|+.|++-|.+..+|-...    ....++. -...|..+.|....++++++ ....+.||
T Consensus       123 f~L~l~eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~----~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvY  196 (545)
T KOG1272|consen  123 FDLSLPEFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTK----KLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVY  196 (545)
T ss_pred             ccccccccCCeeeeecCCccEEEecCCccceeeeecccc----eeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEe
Confidence            334455555577899999999999999999999986321    1111221 12456777887777666665 46789999


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC------------Cccc---cCC
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH------------HNLI---TDD  157 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~------------~~~~---~~d  157 (320)
                      |- .|..+..++.| .+|..+.|-|.  .-+|++++..|.++--|+.+|+.+..+...            ..++   -..
T Consensus       197 D~-~GtElHClk~~-~~v~rLeFLPy--HfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Ghsn  272 (545)
T KOG1272|consen  197 DN-NGTELHCLKRH-IRVARLEFLPY--HFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSN  272 (545)
T ss_pred             cC-CCcEEeehhhc-Cchhhhcccch--hheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCC
Confidence            94 45555555543 45777888765  347778899999999999988876554321            1111   257


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      |+|.+|.....+++..+..|.++|.++++.|+|.|+|+.+.|..++|||++.-..+..+..   ......++||..| +|
T Consensus       273 GtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t---p~~a~~ls~Sqkg-lL  348 (545)
T KOG1272|consen  273 GTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT---PHPASNLSLSQKG-LL  348 (545)
T ss_pred             ceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec---CCCcccccccccc-ce
Confidence            8999999999999888889999999999999999999999999999999997765544433   1234566777544 45


Q ss_pred             EEEeCCCeEEEEc-CCC--CeEEEEeecC--CCceeEEEECcCCCeEEEecCC
Q psy14961        238 FAGYNDYTINVWD-SLK--CCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       238 ~~g~~dg~v~~wd-~~~--~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      |.|. ...|.+|. ...  +......+.|  .++|..+.|.|-...|=.|..-
T Consensus       349 A~~~-G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~  400 (545)
T KOG1272|consen  349 ALSY-GDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAG  400 (545)
T ss_pred             eeec-CCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccC
Confidence            5554 44699994 332  1222223445  3589999999976666555443

>KOG2111|consensus

Probab=99.65  E-value=8.4e-13  Score=107.68  Aligned_cols=259  Identities=14%  Similarity=0.165  Sum_probs=168.1

Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE-EEEeCC------CeEEEEECC
Q psy14961         23 MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI-LTGSGD------CTCALWDVE   95 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d------g~v~iwd~~   95 (320)
                      .+++|..|.+-++.|-.+| .+||+.+.-.+..    ....+...+.-+...-..+++ +.|+.+      ..|-|||=.
T Consensus         9 lsvs~NQD~ScFava~~~G-friyn~~P~ke~~----~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~   83 (346)
T KOG2111|consen    9 LSVSFNQDHSCFAVATDTG-FRIYNCDPFKESA----SRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDL   83 (346)
T ss_pred             eEEEEccCCceEEEEecCc-eEEEecCchhhhh----hhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecc
Confidence            4478999988877776655 8999875321111    111111211111111122333 344443      689999965


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-CCcEEEEeccCCc---c------------c---cC
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-TGYCVQSFEGHHN---L------------I---TD  156 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-~~~~~~~~~~~~~---~------------~---~~  156 (320)
                      ..+++.++. ..++|..+.+..    +.+++. .+..|.+|... +.+.+..++...+   .            +   ..
T Consensus        84 k~~~i~el~-f~~~I~~V~l~r----~riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k  157 (346)
T KOG2111|consen   84 KERCIIELS-FNSEIKAVKLRR----DRIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFK  157 (346)
T ss_pred             cCcEEEEEE-eccceeeEEEcC----CeEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCc
Confidence            566666654 467888887743    355555 45678999876 3333333322111   0            0   12


Q ss_pred             CCeEEEEECcCCee--eeeecCCCCCeEEEEEcCCCCEEEEeeCCCe-EEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        157 DKLVNIWDMRTGYC--VQSFEGHQSDVNSVKFHPSGDAVATGSDDAT-CRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       157 d~~i~iwd~~~~~~--~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      -|.|.+-|+...+.  -..+++|..+|.|++++.+|..+|++|..|+ |||||..+++.+..+........+.+++|||+
T Consensus       158 ~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~  237 (346)
T KOG2111|consen  158 TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPN  237 (346)
T ss_pred             cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCC
Confidence            47888888876544  4678899999999999999999999999998 89999999999888877665566789999999


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCe---E---------------------EEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCC---R---------------------VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~---~---------------------~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      +++||+++..|++++|.+....   .                     ...+.-..+...-++|-.+.+.++..+.||+-+
T Consensus       238 ~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~  317 (346)
T KOG2111|consen  238 SSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYY  317 (346)
T ss_pred             ccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEE
Confidence            9999999999999999654311   1                     000111133445567777655566666777766


Q ss_pred             eee
Q psy14961        290 DEE  292 (320)
Q Consensus       290 ~~~  292 (320)
                      -..
T Consensus       318 k~~  320 (346)
T KOG2111|consen  318 KFK  320 (346)
T ss_pred             EEE
Confidence            443

>KOG1009|consensus

Probab=99.64  E-value=5.2e-14  Score=117.98  Aligned_cols=245  Identities=18%  Similarity=0.234  Sum_probs=164.3

Q ss_pred             CeEeecccce---------eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecc------c------CCcccccc
Q psy14961          1 MIIWDGLTQT---------KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIAL------E------DDSSAKKK   59 (320)
Q Consensus         1 ~~~W~~~~~~---------~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~------~------~~~~~~~~   59 (320)
                      |+||-+.+..         +...+.-|...|+++.|+|+|++||+|+.+|.+.+|....      +      .+......
T Consensus        38 iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k  117 (434)
T KOG1009|consen   38 IRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKK  117 (434)
T ss_pred             eeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEE
Confidence            5688655433         3334456788999999999999999999999999997641      0      11122344


Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      .+.+|...+.-+.|++++.++++++-|..+++||+..++.+..+..|..-+..+++.|.  .+++++-+.|...+.+.+.
T Consensus       118 ~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl--~qyv~s~s~dr~~~~~~~~  195 (434)
T KOG1009|consen  118 VLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPL--NQYVASKSSDRHPEGFSAK  195 (434)
T ss_pred             EecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchh--hhhhhhhccCcccceeeee
Confidence            56789999999999999999999999999999999999999999999999998888654  5788888888866666654


Q ss_pred             CCcEEEEec--------cCC--------------------ccccCCCe-------------------EEEEECcC-Ceee
Q psy14961        140 TGYCVQSFE--------GHH--------------------NLITDDKL-------------------VNIWDMRT-GYCV  171 (320)
Q Consensus       140 ~~~~~~~~~--------~~~--------------------~~~~~d~~-------------------i~iwd~~~-~~~~  171 (320)
                      ..+.+....        .+.                    ...+.||.                   .++|+-.. .++.
T Consensus       196 ~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~  275 (434)
T KOG1009|consen  196 LKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPA  275 (434)
T ss_pred             eeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCce
Confidence            433221110        000                    00112222                   12222111 1223


Q ss_pred             eeecCCCCCeEEEEEcC------------------CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        172 QSFEGHQSDVNSVKFHP------------------SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p------------------~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      ..++....++..+.|+|                  .+-.+|.++.| .+.+||..+..++...... ....++.++|+++
T Consensus       276 ~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~P~~~v~ni-hy~~iTDiaws~d  353 (434)
T KOG1009|consen  276 ARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLEPLAVVDNI-HYSAITDIAWSDD  353 (434)
T ss_pred             eecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecc-eEEEeccccccceEEEeee-eeeeecceeecCC
Confidence            33333344444455544                  23345666654 7999998887766543321 1234688999999


Q ss_pred             CcEEEEEeCCCeEEEE
Q psy14961        234 GRLLFAGYNDYTINVW  249 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~w  249 (320)
                      |+.|+..+.||-..+-
T Consensus       354 g~~l~vSS~DGyCS~v  369 (434)
T KOG1009|consen  354 GSVLLVSSTDGFCSLV  369 (434)
T ss_pred             CcEEEEeccCCceEEE
Confidence            9999999999976553

>KOG1963|consensus

Probab=99.64  E-value=5.7e-14  Score=128.01  Aligned_cols=220  Identities=17%  Similarity=0.267  Sum_probs=158.8

Q ss_pred             EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCCcEEEEecc
Q psy14961         71 CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTGYCVQSFEG  149 (320)
Q Consensus        71 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~~~~~~~~~  149 (320)
                      ..|++++++++... +..|.||...++.++..++.|..++..+.+.+.+.. .++++++.||.|++||...+..+.++..
T Consensus        22 avfSnD~k~l~~~~-~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~  100 (792)
T KOG1963|consen   22 AVFSNDAKFLFLCT-GNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDN  100 (792)
T ss_pred             cccccCCcEEEEee-CCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEec
Confidence            45777777766655 569999999999999999999999999998887654 5778999999999999887765544321


Q ss_pred             CCcc-----------------c-------------------------------------------------------cCC
Q psy14961        150 HHNL-----------------I-------------------------------------------------------TDD  157 (320)
Q Consensus       150 ~~~~-----------------~-------------------------------------------------------~~d  157 (320)
                      +...                 +                                                       .-+
T Consensus       101 ~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~  180 (792)
T KOG1963|consen  101 NLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHM  180 (792)
T ss_pred             CCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEe
Confidence            1100                 0                                                       001


Q ss_pred             CeEEEEECcCCeeee----eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC--CeeEeEEecCcceeeeEEEEEe
Q psy14961        158 KLVNIWDMRTGYCVQ----SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA--DKEVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~----~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~s  231 (320)
                      ..+.+|.........    .-..|.-.+++.++||+++++|++..||.|.+|.--.  +........+.....+.+++|+
T Consensus       181 ~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS  260 (792)
T KOG1963|consen  181 CKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFS  260 (792)
T ss_pred             eeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEe
Confidence            224455554432110    1123666789999999999999999999999996332  2211111111112245789999


Q ss_pred             cCCcEEEEEeCCCeEEEEcCCCCeEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        232 VSGRLLFAGYNDYTINVWDSLKCCRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       232 ~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++|.+|++|+..|.+.+|.+.+..+  ++. .-.++|..+.+|||+.+.+..-.|..|.+-..
T Consensus       261 ~~G~~LlSGG~E~VLv~Wq~~T~~k--qfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  261 SDGAYLLSGGREGVLVLWQLETGKK--QFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             cCCceEeecccceEEEEEeecCCCc--ccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence            9999999999999999999888763  344 45779999999999999888888998886653

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.64  E-value=5.5e-13  Score=116.52  Aligned_cols=231  Identities=12%  Similarity=0.155  Sum_probs=142.0

Q ss_pred             EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECC-Ccce--eeecccCccce
Q psy14961         35 ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVE-SSQL--LQSFHGHTGEL  110 (320)
Q Consensus        35 ~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~-~~~~--~~~~~~~~~~v  110 (320)
                      ++...++.|.+|++.... .......+. +.+....+.+++++++|++++ .++.|.+|+++ ++..  +.... ..+..
T Consensus         6 ~~~~~~~~I~~~~~~~~g-~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p   82 (330)
T PRK11028          6 IASPESQQIHVWNLNHEG-ALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSP   82 (330)
T ss_pred             EEcCCCCCEEEEEECCCC-ceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCc
Confidence            344678999999995221 111222232 234456678899999887765 47899999986 3332  22222 12233


Q ss_pred             eEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC
Q psy14961        111 MDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS  189 (320)
Q Consensus       111 ~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~  189 (320)
                      ..+.+  +++++.+++++. ++.|.+|++.....+.                       +.+..+. +.....+++++|+
T Consensus        83 ~~i~~--~~~g~~l~v~~~~~~~v~v~~~~~~g~~~-----------------------~~~~~~~-~~~~~~~~~~~p~  136 (330)
T PRK11028         83 THIST--DHQGRFLFSASYNANCVSVSPLDKDGIPV-----------------------APIQIIE-GLEGCHSANIDPD  136 (330)
T ss_pred             eEEEE--CCCCCEEEEEEcCCCeEEEEEECCCCCCC-----------------------Cceeecc-CCCcccEeEeCCC
Confidence            34444  567888887764 7788999875311000                       0011111 1223567889999


Q ss_pred             CCEEEE-eeCCCeEEEEECCCCeeEeEEe----cCcceeeeEEEEEecCCcEEEEEeC-CCeEEEEcCCC--C--eEEEE
Q psy14961        190 GDAVAT-GSDDATCRLFDLRADKEVACYK----KDSILFGATSVDFSVSGRLLFAGYN-DYTINVWDSLK--C--CRVNH  259 (320)
Q Consensus       190 g~~l~s-~s~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~s~~~~~l~~g~~-dg~v~~wd~~~--~--~~~~~  259 (320)
                      |+++++ ...++.|.+||+.+...+....    ......++..+.|+|+|++++++.+ +++|.+||...  +  +.+..
T Consensus       137 g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~  216 (330)
T PRK11028        137 NRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQT  216 (330)
T ss_pred             CCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEE
Confidence            998854 4567999999997643221100    0001123467899999999988876 89999999752  2  22333


Q ss_pred             eecC------CCceeEEEECcCCCeEEEec-CCCceEeeecc
Q psy14961        260 LMGH------ENRVSCLQVSPDGTAFSSGS-WDTTLRDEESK  294 (320)
Q Consensus       260 ~~~h------~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~~  294 (320)
                      +..+      ......++|+||+++|+++. .+++|.+|+..
T Consensus       217 ~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~  258 (330)
T PRK11028        217 LDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVS  258 (330)
T ss_pred             EecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEe
Confidence            3221      11234699999999988875 47899999863

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=5.5e-14  Score=126.86  Aligned_cols=208  Identities=16%  Similarity=0.149  Sum_probs=135.9

Q ss_pred             CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC---CeEEEEECCCcce--eeecccCccceeEEE
Q psy14961         40 DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD---CTCALWDVESSQL--LQSFHGHTGELMDLD  114 (320)
Q Consensus        40 dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~--~~~~~~~~~~v~~~~  114 (320)
                      +..|.+||.+...     ...+..|...+.+..|+++++.|+..+.+   ..|.+||+.+++.  +..+.++.   ...+
T Consensus       183 ~~~i~i~d~dg~~-----~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~---~~~~  254 (429)
T PRK01742        183 PYEVRVADYDGFN-----QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN---GAPA  254 (429)
T ss_pred             eEEEEEECCCCCC-----ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc---Ccee
Confidence            4688888875321     23455677788999999999998877643   4799999988753  33333332   2345


Q ss_pred             EeeCCCCCEEEEEe-CCCeEEEE--eCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC
Q psy14961        115 LAPSETGNTFVSGS-SDKLVNIW--DMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD  191 (320)
Q Consensus       115 ~~~~~~~~~l~s~~-~dg~i~lw--d~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~  191 (320)
                      |  +|+|+.|+.++ .+|.+.+|  |+.++..                            ..+..+...+.+.+|+|+|+
T Consensus       255 w--SPDG~~La~~~~~~g~~~Iy~~d~~~~~~----------------------------~~lt~~~~~~~~~~wSpDG~  304 (429)
T PRK01742        255 F--SPDGSRLAFASSKDGVLNIYVMGANGGTP----------------------------SQLTSGAGNNTEPSWSPDGQ  304 (429)
T ss_pred             E--CCCCCEEEEEEecCCcEEEEEEECCCCCe----------------------------EeeccCCCCcCCEEECCCCC
Confidence            5  56788888764 57765554  4433221                            12233444567899999999


Q ss_pred             EEEEee-CCCeEEEEECCCCe-eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeE
Q psy14961        192 AVATGS-DDATCRLFDLRADK-EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSC  269 (320)
Q Consensus       192 ~l~s~s-~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~  269 (320)
                      .++.++ .++...||+++... ........    . ....|+|+|++|+..+.++ +..||+.++.... +..+ .....
T Consensus       305 ~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~----~-~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~-lt~~-~~~~~  376 (429)
T PRK01742        305 SILFTSDRSGSPQVYRMSASGGGASLVGGR----G-YSAQISADGKTLVMINGDN-VVKQDLTSGSTEV-LSST-FLDES  376 (429)
T ss_pred             EEEEEECCCCCceEEEEECCCCCeEEecCC----C-CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEE-ecCC-CCCCC
Confidence            876554 57888888765321 11112111    1 2467999999998887765 5568987764432 2222 12357


Q ss_pred             EEECcCCCeEEEecCCCceEeeec
Q psy14961        270 LQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +.|+|||++|+.++.++.+++|..
T Consensus       377 ~~~sPdG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        377 PSISPNGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             ceECCCCCEEEEEEcCCCceEEEE
Confidence            889999999999999999888874

>KOG1517|consensus

Probab=99.62  E-value=1.2e-13  Score=128.11  Aligned_cols=227  Identities=20%  Similarity=0.310  Sum_probs=159.9

Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccC---ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-----
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGH---TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT-----  140 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~-----  140 (320)
                      ..+.|++-...+++++..-.|++||.+.++.+..|..+   ...|..+.+....|..++++++.||.||+|+-..     
T Consensus      1068 k~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~ 1147 (1387)
T KOG1517|consen 1068 KTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKK 1147 (1387)
T ss_pred             ceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCC
Confidence            34566666677888887779999999998887766533   4567778877666778999999999999997421     


Q ss_pred             CcEEEEeccCCc----------------------cccCCCeEEEEECcCCeeeeeecCC-CCCeEEEEEcC-CCCEEEEe
Q psy14961        141 GYCVQSFEGHHN----------------------LITDDKLVNIWDMRTGYCVQSFEGH-QSDVNSVKFHP-SGDAVATG  196 (320)
Q Consensus       141 ~~~~~~~~~~~~----------------------~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~p-~g~~l~s~  196 (320)
                      .+.+..+.+-..                      ..++-..|++||.....++..++.. ...|+++.-+. .|+.+++|
T Consensus      1148 ~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AG 1227 (1387)
T KOG1517|consen 1148 PELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAG 1227 (1387)
T ss_pred             ceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEe
Confidence            123333321111                      1123467999999888777766543 33466655543 47899999


Q ss_pred             eCCCeEEEEECCCCee---EeEEecCcceeeeEEEEEecCCcE-EEEEeCCCeEEEEcCCCCeEEE--EeecCC--C-ce
Q psy14961        197 SDDATCRLFDLRADKE---VACYKKDSILFGATSVDFSVSGRL-LFAGYNDYTINVWDSLKCCRVN--HLMGHE--N-RV  267 (320)
Q Consensus       197 s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~-l~~g~~dg~v~~wd~~~~~~~~--~~~~h~--~-~i  267 (320)
                      ..||.+++||.+...+   +..+..+....++.-+.+.+.|-- |++|+.+|.|.+||++......  +...|-  + ..
T Consensus      1228 faDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~l 1307 (1387)
T KOG1517|consen 1228 FADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSAL 1307 (1387)
T ss_pred             ecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccc
Confidence            9999999999875432   334444433333556677776654 9999999999999987643322  223443  3 59


Q ss_pred             eEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        268 SCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       268 ~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +++..+++...+|+||. +.|++|+....
T Consensus      1308 Tal~VH~hapiiAsGs~-q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1308 TALTVHEHAPIIASGSA-QLIKIYSLSGE 1335 (1387)
T ss_pred             eeeeeccCCCeeeecCc-ceEEEEecChh
Confidence            99999999999999999 99999996443

>KOG1523|consensus

Probab=99.62  E-value=3.2e-14  Score=115.88  Aligned_cols=207  Identities=18%  Similarity=0.252  Sum_probs=159.1

Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc---eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ---LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG  141 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~  141 (320)
                      ..+|+|-+|.++...++.+-....|.||......   ...++..|...|..++++|.  .+.|.+++.|+.-++|....+
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~--snrIvtcs~drnayVw~~~~~   87 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPK--SNRIVTCSHDRNAYVWTQPSG   87 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCC--CCceeEccCCCCccccccCCC
Confidence            3689999999999999999999999999876654   56778889999999999764  678999999999999987433


Q ss_pred             cEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE--eEEecC
Q psy14961        142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV--ACYKKD  219 (320)
Q Consensus       142 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~  219 (320)
                      -.                   |     ++...+..+...++++.|+|.++.||+||....|.+|-+.....-  ..+.+.
T Consensus        88 ~~-------------------W-----kptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikk  143 (361)
T KOG1523|consen   88 GT-------------------W-----KPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKK  143 (361)
T ss_pred             Ce-------------------e-----ccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCC
Confidence            10                   1     233334457778999999999999999999999999877543221  111122


Q ss_pred             cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-----C-------------CeEEEEeecCCCceeEEEECcCCCeEEE
Q psy14961        220 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-----K-------------CCRVNHLMGHENRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-----~-------------~~~~~~~~~h~~~i~~i~~s~~~~~l~s  281 (320)
                      +..-.+.+++|+|++-+|++|+.|+..++|...     .             ++...++....+.|..+.|+|+|..|+=
T Consensus       144 PirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~law  223 (361)
T KOG1523|consen  144 PIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAW  223 (361)
T ss_pred             ccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeE
Confidence            222346889999999999999999999998521     1             1122333345678999999999999999


Q ss_pred             ecCCCceEeeecchHh
Q psy14961        282 GSWDTTLRDEESKNRY  297 (320)
Q Consensus       282 ~s~D~~ir~~~~~~~~  297 (320)
                      .++|.++-+-|...+.
T Consensus       224 v~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  224 VGHDSTVSFVDAAGPS  239 (361)
T ss_pred             ecCCCceEEeecCCCc
Confidence            9999999998865553

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=4.9e-13  Score=120.53  Aligned_cols=231  Identities=13%  Similarity=0.079  Sum_probs=141.2

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .+||..... ...+..+...+...+|+|||+.|+..+.   +..+.+|++....  ......+   ...+....|+|+++
T Consensus       182 ~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~--~~~l~~~---~~~~~~~~~SPDG~  255 (429)
T PRK03629        182 RVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--VRQVASF---PRHNGAPAFSPDGS  255 (429)
T ss_pred             EEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC--eEEccCC---CCCcCCeEECCCCC
Confidence            355544322 2233445567889999999999987542   3467788764321  1111222   23344678999999


Q ss_pred             EEEEE-eCCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-CeEEEE--eCCCCcEEEEeccCCc
Q psy14961         79 QILTG-SGDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-KLVNIW--DMRTGYCVQSFEGHHN  152 (320)
Q Consensus        79 ~l~s~-~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g~i~lw--d~~~~~~~~~~~~~~~  152 (320)
                      .|+.. +.+|  .|.+||++++...+... +...+....|  +|+|+.|+..+.+ +...+|  |+.++..         
T Consensus       256 ~La~~~~~~g~~~I~~~d~~tg~~~~lt~-~~~~~~~~~w--SPDG~~I~f~s~~~g~~~Iy~~d~~~g~~---------  323 (429)
T PRK03629        256 KLAFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTW--FPDSQNLAYTSDQAGRPQVYKVNINGGAP---------  323 (429)
T ss_pred             EEEEEEcCCCCcEEEEEECCCCCEEEccC-CCCCcCceEE--CCCCCEEEEEeCCCCCceEEEEECCCCCe---------
Confidence            88754 4454  58889998876544332 3334445555  5678888766653 333333  4433321         


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC---CeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD---ATCRLFDLRADKEVACYKKDSILFGATSVD  229 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  229 (320)
                                         ..+..+.......+|+|+|++++..+.+   ..|.+||+.+++... .....   ......
T Consensus       324 -------------------~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~-Lt~~~---~~~~p~  380 (429)
T PRK03629        324 -------------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LTDTF---LDETPS  380 (429)
T ss_pred             -------------------EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEE-eCCCC---CCCCce
Confidence                               1111122234568899999998776543   358889998775432 22211   123567


Q ss_pred             EecCCcEEEEEeCCCe---EEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        230 FSVSGRLLFAGYNDYT---INVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg~---v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      |+|||++|+.++.++.   +.++++. +.....+.+|.+.+...+|+|
T Consensus       381 ~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        381 IAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             ECCCCCEEEEEEcCCCceEEEEEECC-CCCeEECccCCCCcCCcccCC
Confidence            9999999999887654   6667763 444555778888899999998

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.59  E-value=6.7e-13  Score=106.24  Aligned_cols=112  Identities=21%  Similarity=0.383  Sum_probs=87.1

Q ss_pred             CCCeEEEEEcCCCCEEEEe--eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC---CCeEEEEcCC
Q psy14961        178 QSDVNSVKFHPSGDAVATG--SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN---DYTINVWDSL  252 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~---dg~v~~wd~~  252 (320)
                      ..+|.+++|+|+|+.||..  ..++.+.+||++ .+.+..+...    ....+.|+|+|++|++|+.   .|.|.+||..
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~----~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~  133 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQ----PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR  133 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecCC----CceEEEECCCCCEEEEEEccCCCcEEEEEECC
Confidence            4469999999999987554  457799999997 4555444432    2357899999999999863   4789999999


Q ss_pred             CCeEEEEeecCCCceeEEEECcCCCeEEEecC------CCceEeeecchH
Q psy14961        253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW------DTTLRDEESKNR  296 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~------D~~ir~~~~~~~  296 (320)
                      +..++.+.. |. .++.++|+|||++|++++.      |..+++|+....
T Consensus       134 ~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  134 KKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             CCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence            888876653 33 4789999999999999985      788889986433

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=8.2e-13  Score=119.49  Aligned_cols=232  Identities=16%  Similarity=0.156  Sum_probs=141.5

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |.+||... .....+..+...+.+.+|+|||+.|+..+.+   ..|.+|++....  .   ..+....+...+..|++++
T Consensus       186 l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~--~---~~l~~~~g~~~~~~~SpDG  259 (433)
T PRK04922        186 LQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ--R---ELVASFRGINGAPSFSPDG  259 (433)
T ss_pred             EEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC--E---EEeccCCCCccCceECCCC
Confidence            34677643 3333445556678899999999999987643   358888874321  1   1222233445577899999


Q ss_pred             CEEE-EEeCCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CCe--EEEEeCCCCcEEEEeccCC
Q psy14961         78 QQIL-TGSGDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DKL--VNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        78 ~~l~-s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~--i~lwd~~~~~~~~~~~~~~  151 (320)
                      +.++ +.+.+|  .|.+||+.+++... +..+.......+|  +++|+.|+.++. +|.  |.++|+.++....      
T Consensus       260 ~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~~~~~~~~~--spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~------  330 (433)
T PRK04922        260 RRLALTLSRDGNPEIYVMDLGSRQLTR-LTNHFGIDTEPTW--APDGKSIYFTSDRGGRPQIYRVAASGGSAER------  330 (433)
T ss_pred             CEEEEEEeCCCCceEEEEECCCCCeEE-CccCCCCccceEE--CCCCCEEEEEECCCCCceEEEEECCCCCeEE------
Confidence            8775 455555  58899998876543 4334433344555  557888876653 333  4444444332110      


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---eEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA---TCRLFDLRADKEVACYKKDSILFGATSV  228 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~  228 (320)
                                            +..+......++|+|+|++++..+.++   .|.+||+.+++... .....   .....
T Consensus       331 ----------------------lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~-Lt~~~---~~~~p  384 (433)
T PRK04922        331 ----------------------LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRT-LTPGS---LDESP  384 (433)
T ss_pred             ----------------------eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEE-CCCCC---CCCCc
Confidence                                  101112234689999999987665433   69999998776542 22211   12356


Q ss_pred             EEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        229 DFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       229 ~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      .|+|||++++..+.+   +.+.+++... .....+..+.+.+...+|+|
T Consensus       385 ~~spdG~~i~~~s~~~g~~~L~~~~~~g-~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        385 SFAPNGSMVLYATREGGRGVLAAVSTDG-RVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             eECCCCCEEEEEEecCCceEEEEEECCC-CceEEcccCCCCCCCCccCC
Confidence            799999988777653   3577777644 34444555666777888887

>KOG2111|consensus

Probab=99.56  E-value=1.9e-12  Score=105.66  Aligned_cols=224  Identities=13%  Similarity=0.184  Sum_probs=141.4

Q ss_pred             eEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCC------CeEEEEeCCC
Q psy14961         68 ISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSD------KLVNIWDMRT  140 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~d------g~i~lwd~~~  140 (320)
                      ..++.|..+..-+++|. |.-.+||+.+.-+....-+.+.+...-+.+-..  .++|+ .|+.+      ..+.+||=..
T Consensus         8 ~lsvs~NQD~ScFava~-~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD~k   84 (346)
T KOG2111|consen    8 TLSVSFNQDHSCFAVAT-DTGFRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDDLK   84 (346)
T ss_pred             eeEEEEccCCceEEEEe-cCceEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEeccc
Confidence            34477877666666665 445899998764432222222222211222222  23444 33333      3688999655


Q ss_pred             CcEEEEec-----------cCCccccCCCeEEEEECcC-CeeeeeecCC--CCCeEEEEEcCCCCEEEEe-eCCCeEEEE
Q psy14961        141 GYCVQSFE-----------GHHNLITDDKLVNIWDMRT-GYCVQSFEGH--QSDVNSVKFHPSGDAVATG-SDDATCRLF  205 (320)
Q Consensus       141 ~~~~~~~~-----------~~~~~~~~d~~i~iwd~~~-~~~~~~~~~~--~~~v~~v~~~p~g~~l~s~-s~dg~i~iw  205 (320)
                      .+++.++.           ....++.-++.|++|...+ -+.+..++..  ...+.+++-+.+...||.- -.-|.|.|-
T Consensus        85 ~~~i~el~f~~~I~~V~l~r~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~  164 (346)
T KOG2111|consen   85 ERCIIELSFNSEIKAVKLRRDRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIV  164 (346)
T ss_pred             CcEEEEEEeccceeeEEEcCCeEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEE
Confidence            55655442           2233344577888987653 3333333222  2234444444344445443 356899999


Q ss_pred             ECCCCeeE--eEEecCcceeeeEEEEEecCCcEEEEEeCCCe-EEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEE
Q psy14961        206 DLRADKEV--ACYKKDSILFGATSVDFSVSGRLLFAGYNDYT-INVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFS  280 (320)
Q Consensus       206 d~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~-v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~  280 (320)
                      |+...+.-  .....+.  -.+..++.+.+|+.+||++..|+ |+|||..++.++.++..-  ...|.+|+||||+.+||
T Consensus       165 dL~~~~~~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~La  242 (346)
T KOG2111|consen  165 DLASTKPNAPSIINAHD--SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLA  242 (346)
T ss_pred             EhhhcCcCCceEEEccc--CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEE
Confidence            98765441  2222222  24678899999999999999997 899999999999888643  34799999999999999


Q ss_pred             EecCCCceEeeecchH
Q psy14961        281 SGSWDTTLRDEESKNR  296 (320)
Q Consensus       281 s~s~D~~ir~~~~~~~  296 (320)
                      .+|.-||+.++..+..
T Consensus       243 vsSdKgTlHiF~l~~~  258 (346)
T KOG2111|consen  243 VSSDKGTLHIFSLRDT  258 (346)
T ss_pred             EEcCCCeEEEEEeecC
Confidence            9999999999987554

>KOG1272|consensus

Probab=99.56  E-value=6.2e-15  Score=125.44  Aligned_cols=196  Identities=15%  Similarity=0.225  Sum_probs=154.3

Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      ..+.++.+|..++.|++-|.+-.+|..+.++...+.. ...|.++.|--.   ..++...+...+.+||-. |.-+..+ 
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHn---eq~~AVAQK~y~yvYD~~-GtElHCl-  206 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHN---EQFFAVAQKKYVYVYDNN-GTELHCL-  206 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcc---hHHHHhhhhceEEEecCC-CcEEeeh-
Confidence            4577888999999999999999999999988877663 455666666432   234444566777888733 2222211 


Q ss_pred             cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961        149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV  228 (320)
Q Consensus       149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  228 (320)
                                                + ...+|..+.|-|..-.|+++++.|.++.-|+..++.+..+.....  ....+
T Consensus       207 --------------------------k-~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G--~~~vm  257 (545)
T KOG1272|consen  207 --------------------------K-RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAG--RTDVM  257 (545)
T ss_pred             --------------------------h-hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCC--ccchh
Confidence                                      1 123678899999988899999999999999999987765533221  23456


Q ss_pred             EEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        229 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                      .-+|-...+-+|...|+|.+|......++..+.-|.++|++|++.++|+++||+|.|+.+++||.++-++.
T Consensus       258 ~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql  328 (545)
T KOG1272|consen  258 KQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQL  328 (545)
T ss_pred             hcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccc
Confidence            67888899999999999999999888999889999999999999999999999999999999999887743

>KOG1334|consensus

Probab=99.56  E-value=5.8e-14  Score=120.25  Aligned_cols=276  Identities=20%  Similarity=0.274  Sum_probs=192.1

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCCEEEEEeCCCeEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQQILTGSGDCTCAL   91 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~i   91 (320)
                      .+..|..-|..+.|...|..|++|+.|..+.+||-...   .....-..+|...|...+|-|  +.+-+++.+.||.|++
T Consensus       137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~---~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSG---SPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             cccCCCCccceeeecccCceeeccCccceEEeehhhcc---CcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence            45567788999999999999999999999999986422   122233457777777777744  3467899999999998


Q ss_pred             EECCC-cce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---ccC---------------
Q psy14961         92 WDVES-SQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---EGH---------------  150 (320)
Q Consensus        92 wd~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~---~~~---------------  150 (320)
                      =.+.. +..  ...+..|.++|..+++.|.. ...|++++.|+.+.-.|++.+..-..+   ..+               
T Consensus       214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~s-p~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~  292 (559)
T KOG1334|consen  214 SEILETGYVENTKRLAPHEGPVHKLAVEPDS-PKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPR  292 (559)
T ss_pred             eeeccccceecceecccccCccceeeecCCC-CCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCC
Confidence            76533 222  24456789999999987764 468999999999999999876432111   000               


Q ss_pred             ----CccccCCCeEEEEECcCCee------eeeecC------CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee--
Q psy14961        151 ----HNLITDDKLVNIWDMRTGYC------VQSFEG------HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE--  212 (320)
Q Consensus       151 ----~~~~~~d~~i~iwd~~~~~~------~~~~~~------~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--  212 (320)
                          ..+...|..+++||.+.-..      +..+..      ....|++++|+.++.-|.+...|-.|+++.-.-+..  
T Consensus       293 nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~  372 (559)
T KOG1334|consen  293 NTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSE  372 (559)
T ss_pred             CccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCC
Confidence                01112466778888764221      122222      234689999997766566666677899985322111  


Q ss_pred             ----------Ee-EEecCcceeeeEEE-EEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEE
Q psy14961        213 ----------VA-CYKKDSILFGATSV-DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFS  280 (320)
Q Consensus       213 ----------~~-~~~~~~~~~~~~~~-~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~  280 (320)
                                +. .|+.+...-.+-.+ -|.|...|+++|+.=|.|.||+..+++.+.-+.+-...|+||.=+|.-.+||
T Consensus       373 p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLA  452 (559)
T KOG1334|consen  373 PDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLA  452 (559)
T ss_pred             CCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhh
Confidence                      11 13333221112222 3679999999999999999999888887776766555899999999999999


Q ss_pred             EecCCCceEeeec
Q psy14961        281 SGSWDTTLRDEES  293 (320)
Q Consensus       281 s~s~D~~ir~~~~  293 (320)
                      |+|-|.-||+|.-
T Consensus       453 sSGid~DVKIWTP  465 (559)
T KOG1334|consen  453 SSGIDHDVKIWTP  465 (559)
T ss_pred             ccCCccceeeecC
Confidence            9999999999985

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=1.4e-12  Score=117.57  Aligned_cols=221  Identities=19%  Similarity=0.186  Sum_probs=134.1

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE-EEeCCCeE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL-TGSGDCTC   89 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v   89 (320)
                      .+..+...+.+.+|+|||+.|+..+.+   ..|.+||+....  .   ..+......+.+..|+++++.|+ +.+.+|..
T Consensus       190 ~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~--~---~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~  264 (427)
T PRK02889        190 SALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR--R---RVVANFKGSNSAPAWSPDGRTLAVALSRDGNS  264 (427)
T ss_pred             EeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC--E---EEeecCCCCccceEECCCCCEEEEEEccCCCc
Confidence            344456778899999999999887643   348888875321  1   12222334556788999998876 56778877


Q ss_pred             EEEEC--CCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeC--CCCcEEEEeccCCccccCCCeEEEEE
Q psy14961         90 ALWDV--ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDM--RTGYCVQSFEGHHNLITDDKLVNIWD  164 (320)
Q Consensus        90 ~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~--~~~~~~~~~~~~~~~~~~d~~i~iwd  164 (320)
                      .||.+  .++. ...+..+.+......|  +++|+.++..+. ++...+|.+  .++...                    
T Consensus       265 ~Iy~~d~~~~~-~~~lt~~~~~~~~~~w--SpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~--------------------  321 (427)
T PRK02889        265 QIYTVNADGSG-LRRLTQSSGIDTEPFF--SPDGRSIYFTSDRGGAPQIYRMPASGGAAQ--------------------  321 (427)
T ss_pred             eEEEEECCCCC-cEECCCCCCCCcCeEE--cCCCCEEEEEecCCCCcEEEEEECCCCceE--------------------
Confidence            77754  4443 3344434443444555  557888776554 455555543  222110                    


Q ss_pred             CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961        165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA---TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                           .+ ++.+  ......+|+|+|++++..+.++   .|.+||+.+++....... .   ......|+|||++|+..+
T Consensus       322 -----~l-t~~g--~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~-~---~~~~p~~spdg~~l~~~~  389 (427)
T PRK02889        322 -----RV-TFTG--SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT-T---RDESPSFAPNGRYILYAT  389 (427)
T ss_pred             -----EE-ecCC--CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC-C---CccCceECCCCCEEEEEE
Confidence                 00 1111  1223578999999998776554   699999987764432221 1   124678999999988877


Q ss_pred             CCC-e--EEEEcCCCCeEEEEeecCCCceeEEEECcC
Q psy14961        242 NDY-T--INVWDSLKCCRVNHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       242 ~dg-~--v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~  275 (320)
                      .++ .  +.+.+. .+.....+..+.+.+...+|+|-
T Consensus       390 ~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        390 QQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             ecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCCC
Confidence            543 3  444454 34444445566777888888873

>KOG1310|consensus

Probab=99.55  E-value=7.8e-14  Score=121.18  Aligned_cols=224  Identities=21%  Similarity=0.302  Sum_probs=153.0

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCA   90 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~   90 (320)
                      ..+..|..=|++++|+.+|.+|++|+.|-.+.|||...   .+.....-.+|..-|.|++|-|.  ...+++|+.|..|+
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~---~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFE---YKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchh---cceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence            34667888999999999999999999999999999741   11222233589999999999653  46788999999999


Q ss_pred             EEECCC----------cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         91 LWDVES----------SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        91 iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      ++|+..          ......+..|...|..++.+|.. .+.+.++++||.|+.+|++..-...          .++.+
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~-PhtfwsasEDGtirQyDiREph~c~----------p~~~~  189 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNG-PHTFWSASEDGTIRQYDIREPHVCN----------PDEDC  189 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCC-CceEEEecCCcceeeecccCCccCC----------ccccc
Confidence            999974          12344556788888877766542 3799999999999999997532110          00000


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee------------------EeEEec---
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE------------------VACYKK---  218 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~------------------~~~~~~---  218 (320)
                      .       ..+......--...|+..+|.. .+|+.|+.|-..++||.+...+                  +..|..   
T Consensus       190 ~-------~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hl  262 (758)
T KOG1310|consen  190 P-------SILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHL  262 (758)
T ss_pred             c-------HHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccc
Confidence            0       0000000111245789999965 5788999999999999432110                  111110   


Q ss_pred             -------CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        219 -------DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       219 -------~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                             ...+.+++-+.|+|+|+-|++....-.|.++|+...+..
T Consensus       263 kn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~  308 (758)
T KOG1310|consen  263 KNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP  308 (758)
T ss_pred             cCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence                   011223567889999998888887778999998766544

>KOG1587|consensus

Probab=99.55  E-value=1.3e-12  Score=118.50  Aligned_cols=236  Identities=17%  Similarity=0.159  Sum_probs=155.5

Q ss_pred             CeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEeCCCeEEEEECCCcce--ee----ecccCccceeEE
Q psy14961         41 NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGSGDCTCALWDVESSQL--LQ----SFHGHTGELMDL  113 (320)
Q Consensus        41 g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~--~~----~~~~~~~~v~~~  113 (320)
                      +.+.+|++..+..   .. ........|.|+.|.+. ...++.|..+|.|.+||+..+..  ..    ....|..++..+
T Consensus       222 ~~~~vW~~~~p~~---Pe-~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~v  297 (555)
T KOG1587|consen  222 GVLLVWSLKNPNT---PE-LVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAV  297 (555)
T ss_pred             ceEEEEecCCCCC---ce-EEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEE
Confidence            4788998854311   11 12234578999999765 45677778899999999976543  11    224578888888


Q ss_pred             EEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CE
Q psy14961        114 DLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DA  192 (320)
Q Consensus       114 ~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~  192 (320)
                      .+..+..+.-|++++.||.|..|+++.-......      ...+...+        .-.+. .....+.+++|.|.. ..
T Consensus       298 vW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~------~~~~~~~~--------~~~~~-~~~~~~t~~~F~~~~p~~  362 (555)
T KOG1587|consen  298 VWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEG------LLLESKKH--------KGQQS-SKAVGATSLKFEPTDPNH  362 (555)
T ss_pred             EEeccCCCCceEEEecCCcEeeeeccccccchhh------cccccccc--------ccccc-ccccceeeEeeccCCCce
Confidence            8776655567999999999999987643221100      00000000        00000 112357899999854 56


Q ss_pred             EEEeeCCCeEEEEE---CCCCeeEeEEecC----cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCC
Q psy14961        193 VATGSDDATCRLFD---LRADKEVACYKKD----SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHE  264 (320)
Q Consensus       193 l~s~s~dg~i~iwd---~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~  264 (320)
                      |+.|+++|.|.-=+   ...... ..++..    .....+.++.++|-+..++..+.|-+|+||... ...++..+..+.
T Consensus       363 FiVGTe~G~v~~~~r~g~~~~~~-~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~  441 (555)
T KOG1587|consen  363 FIVGTEEGKVYKGCRKGYTPAPE-VSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSP  441 (555)
T ss_pred             EEEEcCCcEEEEEeccCCccccc-ccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhcc
Confidence            89999999887633   222221 111111    112346788889887766555559999999877 677888888888


Q ss_pred             CceeEEEECc-CCCeEEEecCCCceEeeecchH
Q psy14961        265 NRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       265 ~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +.|++++||| ....|+++..||.|-+||..+.
T Consensus       442 ~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~  474 (555)
T KOG1587|consen  442 DYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD  474 (555)
T ss_pred             ceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence            9999999999 5678999999999999997443

>KOG4497|consensus

Probab=99.54  E-value=3.1e-12  Score=104.92  Aligned_cols=272  Identities=15%  Similarity=0.247  Sum_probs=173.9

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE-EeCCCeEEEEECCCcceeee
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT-GSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~~  102 (320)
                      =|.|||+|++||+++.- .+-|-|..    +.+..+ +...-..|.-+.|..+..++++ ...|+.|.+|++...+--..
T Consensus        13 ~c~fSp~g~yiAs~~~y-rlviRd~~----tlq~~q-lf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ck   86 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRY-RLVIRDSE----TLQLHQ-LFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCK   86 (447)
T ss_pred             ceeECCCCCeeeeeeee-EEEEeccc----hhhHHH-HHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEE
Confidence            36799999999999865 55565542    111111 1111234455667777766665 45688999999988777677


Q ss_pred             cccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCCcEEE-----------EeccCCccc----------------
Q psy14961        103 FHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTGYCVQ-----------SFEGHHNLI----------------  154 (320)
Q Consensus       103 ~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~~~~~-----------~~~~~~~~~----------------  154 (320)
                      +.....++..+.++|  +| +.|.+..-+-.|.+|.+.+..+..           +|.......                
T Consensus        87 Ideg~agls~~~WSP--dgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~  164 (447)
T KOG4497|consen   87 IDEGQAGLSSISWSP--DGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISS  164 (447)
T ss_pred             eccCCCcceeeeECC--CcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHh
Confidence            776677777777754  67 455667778889999998754332           121111100                


Q ss_pred             -----------------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe
Q psy14961        155 -----------------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK  211 (320)
Q Consensus       155 -----------------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~  211 (320)
                                             .++..+-+||.--...+...+ ..-.+..++|+|.++.|+.|+.|+.+++.+--+-+
T Consensus       165 c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk  243 (447)
T KOG4497|consen  165 CKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWK  243 (447)
T ss_pred             hHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeee
Confidence                                   123456777753332222111 22468899999999999999999998885421100


Q ss_pred             e----------------------------------------------------------EeEE------ecCcceeeeEE
Q psy14961        212 E----------------------------------------------------------VACY------KKDSILFGATS  227 (320)
Q Consensus       212 ~----------------------------------------------------------~~~~------~~~~~~~~~~~  227 (320)
                      +                                                          +...      ...+...++..
T Consensus       244 ~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~  323 (447)
T KOG4497|consen  244 PFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGK  323 (447)
T ss_pred             ehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccce
Confidence            0                                                          0000      00112345678


Q ss_pred             EEEecCCcEEEEEeCC--CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhheeeee
Q psy14961        228 VDFSVSGRLLFAGYND--YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSR  305 (320)
Q Consensus       228 ~~~s~~~~~l~~g~~d--g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~  305 (320)
                      ++|++|+.+++|-...  ..+-+||++..+.-. ..-...+|....|.|....|+.+.....+.+|.-.-+.       -
T Consensus       324 lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~a-vLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~~-------~  395 (447)
T KOG4497|consen  324 LAFSCDSTYAATRNDKYPNALWLWDLQNLKLHA-VLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPR-------V  395 (447)
T ss_pred             eeecCCceEEeeecCCCCceEEEEechhhhhhh-hhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCce-------E
Confidence            9999999999997643  578899988754433 34456789999999988888888877778888843321       3


Q ss_pred             eecCCcc
Q psy14961        306 ITKPTQG  312 (320)
Q Consensus       306 ~~~~~~~  312 (320)
                      ..-|++|
T Consensus       396 V~vP~~G  402 (447)
T KOG4497|consen  396 VGVPKKG  402 (447)
T ss_pred             EecCCCC
Confidence            4457777

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=9.6e-12  Score=112.68  Aligned_cols=230  Identities=11%  Similarity=0.078  Sum_probs=139.2

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .+||.. +.....+..+...+....|+|||+.|+..+.   +..|.+|++....     ...+..+...+....|+++++
T Consensus       185 ~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~-----~~~l~~~~g~~~~~~~SPDG~  258 (435)
T PRK05137        185 AIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ-----RELVGNFPGMTFAPRFSPDGR  258 (435)
T ss_pred             EEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc-----EEEeecCCCcccCcEECCCCC
Confidence            455653 3333445556778999999999999988764   3578888875321     122334455667788999998


Q ss_pred             EEE-EEeCCCe--EEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC--eEEEEeCCCCcEEEEeccCCc
Q psy14961         79 QIL-TGSGDCT--CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK--LVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        79 ~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg--~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      .|+ +.+.++.  |.+||+.++... .+..+........|  +++|+.++..+. +|  .|.++|+..+..         
T Consensus       259 ~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~--spDG~~i~f~s~~~g~~~Iy~~d~~g~~~---------  326 (435)
T PRK05137        259 KVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSY--SPDGSQIVFESDRSGSPQLYVMNADGSNP---------  326 (435)
T ss_pred             EEEEEEecCCCceEEEEECCCCceE-EccCCCCccCceeE--cCCCCEEEEEECCCCCCeEEEEECCCCCe---------
Confidence            775 5555655  666788777653 34434444444555  557888876653 22  355555443321         


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC---CeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD---ATCRLFDLRADKEVACYKKDSILFGATSVD  229 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  229 (320)
                                         ..+..+...+....|+|+|+.++..+.+   ..|.+||+..+... ......   ......
T Consensus       327 -------------------~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~-~lt~~~---~~~~p~  383 (435)
T PRK05137        327 -------------------RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGER-ILTSGF---LVEGPT  383 (435)
T ss_pred             -------------------EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceE-eccCCC---CCCCCe
Confidence                               1111123345568899999998776543   36888887654432 222211   235678


Q ss_pred             EecCCcEEEEEeCC------CeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        230 FSVSGRLLFAGYND------YTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       230 ~s~~~~~l~~g~~d------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      |+|||++|+..+.+      ..+.++|+..... ..+. ....+...+|+|
T Consensus       384 ~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        384 WAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPGDASDPAWSP  432 (435)
T ss_pred             ECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCCCccCcccCC
Confidence            99999988776542      2566777655433 2333 344567777877

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.50  E-value=1.3e-10  Score=102.19  Aligned_cols=261  Identities=15%  Similarity=0.163  Sum_probs=149.1

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      .+.|..+.+....+......-..+.|+|||+++..++.||.+.++|+...+    ...++..- ..-..+.++++|++++
T Consensus        19 ~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~----~v~~i~~G-~~~~~i~~s~DG~~~~   93 (369)
T PF02239_consen   19 AVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK----VVATIKVG-GNPRGIAVSPDGKYVY   93 (369)
T ss_dssp             EEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS----EEEEEE-S-SEEEEEEE--TTTEEE
T ss_pred             EEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc----EEEEEecC-CCcceEEEcCCCCEEE
Confidence            356777777777776543332346799999999999999999999985322    22233222 2346788899999998


Q ss_pred             EEe-CCCeEEEEECCCcceeeecccCc-------cceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961         82 TGS-GDCTCALWDVESSQLLQSFHGHT-------GELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        82 s~~-~dg~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      ++. .++.+.++|.++.++++.+....       ..+..+..  ++....++ +.-..+.|.+-|......+..      
T Consensus        94 v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~--s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~------  165 (369)
T PF02239_consen   94 VANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVA--SPGRPEFVVNLKDTGEIWVVDYSDPKNLKV------  165 (369)
T ss_dssp             EEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE---SSSSEEEEEETTTTEEEEEETTTSSCEEE------
T ss_pred             EEecCCCceeEeccccccceeecccccccccccCCCceeEEe--cCCCCEEEEEEccCCeEEEEEeccccccce------
Confidence            776 58999999999998887765322       23333332  33344344 444446666666544321110      


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEe--------------
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYK--------------  217 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~--------------  217 (320)
                                         ..+ ..........|+|++++++.+ ..++.+-++|..+++.+....              
T Consensus       166 -------------------~~i-~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~p  225 (369)
T PF02239_consen  166 -------------------TTI-KVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFP  225 (369)
T ss_dssp             -------------------EEE-E--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEE
T ss_pred             -------------------eee-cccccccccccCcccceeeecccccceeEEEeeccceEEEEeecccccccccccccc
Confidence                               000 111234567889998887554 456688888877665432210              


Q ss_pred             cCcc-------------------------------e-------eeeEEEEEecCCcEEEEE----eCCCeEEEEcCCCCe
Q psy14961        218 KDSI-------------------------------L-------FGATSVDFSVSGRLLFAG----YNDYTINVWDSLKCC  255 (320)
Q Consensus       218 ~~~~-------------------------------~-------~~~~~~~~s~~~~~l~~g----~~dg~v~~wd~~~~~  255 (320)
                      +...                               .       .+..-++-+|+++++.+.    ...++|.++|..+.+
T Consensus       226 hp~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~  305 (369)
T PF02239_consen  226 HPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK  305 (369)
T ss_dssp             ETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE
T ss_pred             CCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcc
Confidence            0000                               0       001225568999999988    355899999999887


Q ss_pred             EEEEeecC-CCceeEEEECcCCCeEEEecCCC--ceEeeecch
Q psy14961        256 RVNHLMGH-ENRVSCLQVSPDGTAFSSGSWDT--TLRDEESKN  295 (320)
Q Consensus       256 ~~~~~~~h-~~~i~~i~~s~~~~~l~s~s~D~--~ir~~~~~~  295 (320)
                      .+.++... ...+..+.|++||+.+-.+.+|+  .|.++|.++
T Consensus       306 ~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~T  348 (369)
T PF02239_consen  306 VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKT  348 (369)
T ss_dssp             EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTT
T ss_pred             eeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCC
Confidence            77666432 23589999999999866665544  599999743

...

>KOG2139|consensus

Probab=99.49  E-value=3.5e-12  Score=105.84  Aligned_cols=194  Identities=19%  Similarity=0.271  Sum_probs=131.4

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC----
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG----  141 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~----  141 (320)
                      -+.-++|.++-..++++..|-.|++|+-.... ...++ .....|.+++|-|.. +..|+.|+..| |.+|.....    
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~ksst~-pt~Lks~sQrnvtclawRPls-aselavgCr~g-IciW~~s~tln~~  176 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSSTC-PTKLKSVSQRNVTCLAWRPLS-ASELAVGCRAG-ICIWSDSRTLNAN  176 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCCCC-CceecchhhcceeEEEeccCC-cceeeeeecce-eEEEEcCcccccc
Confidence            34556777766678889999999999866532 22222 234578889987764 45677777655 778875321    


Q ss_pred             cEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCc
Q psy14961        142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDS  220 (320)
Q Consensus       142 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~  220 (320)
                      +.++-...+.                 ..+..-++| .+|++++|.+||..+++++- |..|+|||.+++..+.....  
T Consensus       177 r~~~~~s~~~-----------------~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~--  236 (445)
T KOG2139|consen  177 RNIRMMSTHH-----------------LQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPK--  236 (445)
T ss_pred             cccccccccc-----------------hhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccccc--
Confidence            1111000000                 112233455 68999999999999999885 67899999998876543322  


Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEEc-CCCCeEEEEeecCCCceeEEEECcCCCeEE-EecC
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVWD-SLKCCRVNHLMGHENRVSCLQVSPDGTAFS-SGSW  284 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd-~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~-s~s~  284 (320)
                      ...+++-+.|||||.+|++++-|+..++|+ .+.........+ .+.|...+|+|+|+.|. +.+.
T Consensus       237 glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lg-sgrvqtacWspcGsfLLf~~sg  301 (445)
T KOG2139|consen  237 GLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILG-SGRVQTACWSPCGSFLLFACSG  301 (445)
T ss_pred             CCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceecc-CCceeeeeecCCCCEEEEEEcC
Confidence            223567899999999999999999999995 444444444444 33899999999998744 4443

>KOG4227|consensus

Probab=99.49  E-value=1.4e-12  Score=109.18  Aligned_cols=199  Identities=19%  Similarity=0.261  Sum_probs=138.6

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC------cceeeec-ccCccceeEEEEeeCCCCCEEEEEeCC
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES------SQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSD  130 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~d  130 (320)
                      ++.+.+|.+-|.++.|+.++++|++|+.|..+++|+++.      .+++... ..|.+.|.+++|.  ....++++|..+
T Consensus        49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~--~~N~~~~SG~~~  126 (609)
T KOG4227|consen   49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFD--LENRFLYSGERW  126 (609)
T ss_pred             hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEc--cCCeeEecCCCc
Confidence            345678999999999999999999999999999999753      3444433 2355889888874  345689999999


Q ss_pred             CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        131 KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       131 g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                      ++|.+-|+.+.+.+..+..                         ....+.|..+..+|..+.|++.+.+|.|.+||.+..
T Consensus       127 ~~VI~HDiEt~qsi~V~~~-------------------------~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~  181 (609)
T KOG4227|consen  127 GTVIKHDIETKQSIYVANE-------------------------NNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR  181 (609)
T ss_pred             ceeEeeecccceeeeeecc-------------------------cCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence            9999999988765543321                         112347888999999999999999999999999865


Q ss_pred             e-eEeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCCeE-EEE---eecCC---CceeEEEECcCCCeEEE
Q psy14961        211 K-EVACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKCCR-VNH---LMGHE---NRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       211 ~-~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~~~-~~~---~~~h~---~~i~~i~~s~~~~~l~s  281 (320)
                      . +...+-.....-...++.|+|-.. +|++.++.+-+.+||...... +.+   +.+-.   ..--++-|+|+|..|.+
T Consensus       182 ~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~ms  261 (609)
T KOG4227|consen  182 QNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMS  261 (609)
T ss_pred             CCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehh
Confidence            4 211111111111235678998765 778888888999999654321 111   11111   12246778888888776


Q ss_pred             ec
Q psy14961        282 GS  283 (320)
Q Consensus       282 ~s  283 (320)
                      --
T Consensus       262 iR  263 (609)
T KOG4227|consen  262 IR  263 (609)
T ss_pred             hh
Confidence            53

>KOG1240|consensus

Probab=99.49  E-value=3.7e-12  Score=120.09  Aligned_cols=228  Identities=13%  Similarity=0.121  Sum_probs=149.6

Q ss_pred             cccccccccccCeEEEEec-CCCCEEEEEeCCCeEEEEECCC-------cceeeecccCccceeEEEEeeCCCCCEEEEE
Q psy14961         56 AKKKTVATHTSFISCCIFP-NSDQQILTGSGDCTCALWDVES-------SQLLQSFHGHTGELMDLDLAPSETGNTFVSG  127 (320)
Q Consensus        56 ~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~  127 (320)
                      .....+.+|...+..++.+ +++.++++|+.||+|++|+...       .+...++......+.++.+++  .++.+|.+
T Consensus      1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~--~~~~~Av~ 1116 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG--NGDQFAVS 1116 (1431)
T ss_pred             eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc--CCCeEEEE
Confidence            3445667788777776664 4558999999999999999743       122334444566777787765  47899999


Q ss_pred             eCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CC-CEEEEeeCCCeEEEE
Q psy14961        128 SSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SG-DAVATGSDDATCRLF  205 (320)
Q Consensus       128 ~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g-~~l~s~s~dg~i~iw  205 (320)
                      +.||.|++.++...... ...        -..+++-|..         ....-|..-+|.. .+ ..++.+...+.|..|
T Consensus      1117 t~DG~v~~~~id~~~~~-~~~--------~~~~ri~n~~---------~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVS-KRV--------ATQVRIPNLK---------KDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred             cCCCeEEEEEccccccc-cce--------eeeeeccccc---------CCCceEEeecccccccceeEEEEEeccceEEe
Confidence            99999999988642100 000        0001111111         1111122223322 12 357778888999999


Q ss_pred             ECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcC---CCeEEE
Q psy14961        206 DLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPD---GTAFSS  281 (320)
Q Consensus       206 d~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~---~~~l~s  281 (320)
                      |++........+.......+++++.+|.+.+++.|++.|.+.+||++-+.++... .++..+|..++.+|-   ....++
T Consensus      1179 D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs 1258 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVS 1258 (1431)
T ss_pred             cchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEE
Confidence            9986544333333323334789999999999999999999999999877776543 356678998888873   245665


Q ss_pred             ecC--CCceEeeecchHhhhheee
Q psy14961        282 GSW--DTTLRDEESKNRYVQYLLR  303 (320)
Q Consensus       282 ~s~--D~~ir~~~~~~~~~~~~~~  303 (320)
                      +|.  .+.+-+|+.++-..++-+.
T Consensus      1259 ~~~~~~nevs~wn~~~g~~~~vl~ 1282 (1431)
T KOG1240|consen 1259 AGSSSNNEVSTWNMETGLRQTVLW 1282 (1431)
T ss_pred             ecccCCCceeeeecccCcceEEEE
Confidence            554  6778899987776666555

>KOG4547|consensus

Probab=99.48  E-value=1.5e-11  Score=108.04  Aligned_cols=200  Identities=19%  Similarity=0.206  Sum_probs=136.7

Q ss_pred             cCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE-E-------
Q psy14961         74 PNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV-Q-------  145 (320)
Q Consensus        74 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~-~-------  145 (320)
                      ++...+++....||.+|+|+..+++..+.|..-.                  ..+..+.--.|.+..+... +       
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~------------------~~s~t~~~~~w~L~~~~s~~k~~~~~~~   63 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA------------------SLSGTCTYTKWGLSADYSPMKWLSLEKA   63 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccch------------------hccCcceeEEEEEEeccchHHHHhHHHH
Confidence            3445678888899999999999888765553210                  0000111122221111000 0       


Q ss_pred             ---Eecc-CCccccCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC
Q psy14961        146 ---SFEG-HHNLITDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       146 ---~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~  219 (320)
                         ..+. +-...+..|.|.+|+...++....+  ..|.+.|+++.++.+-..|.|++.|+.+..|+....+....+...
T Consensus        64 ~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~  143 (541)
T KOG4547|consen   64 KKASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ  143 (541)
T ss_pred             hhccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC
Confidence               0000 0001134566666666666655554  358899999999998889999999999999999887766655443


Q ss_pred             cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcC-----CCe-EEEecCCCceEeeec
Q psy14961        220 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD-----GTA-FSSGSWDTTLRDEES  293 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~-----~~~-l~s~s~D~~ir~~~~  293 (320)
                      ..  ...++.++|||.+|++++  ++|++||..+.+.+.+|.||.++|++++|.-+     |++ |.++..+.-|-+|-.
T Consensus       144 ~~--~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v  219 (541)
T KOG4547|consen  144 KP--LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV  219 (541)
T ss_pred             CC--ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence            33  246788999999999986  56999999999999999999999999999987     554 566667777777764


Q ss_pred             ch
Q psy14961        294 KN  295 (320)
Q Consensus       294 ~~  295 (320)
                      ..
T Consensus       220 ~~  221 (541)
T KOG4547|consen  220 EK  221 (541)
T ss_pred             Ec
Confidence            33

>KOG2315|consensus

Probab=99.48  E-value=7.8e-11  Score=103.02  Aligned_cols=280  Identities=16%  Similarity=0.205  Sum_probs=162.9

Q ss_pred             eEeecccceeEEEEEeC---ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          2 IIWDGLTQTKEHSVTMP---ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~---~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .+|.....+....+..+   ......++++++|++++.+. +..++|++.....   .... .  ...-+..+.|++.+.
T Consensus        14 ~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~---~~lt-~--~~~~~~~L~fSP~g~   86 (566)
T KOG2315|consen   14 YLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLK---VVLC-V--ELKKTYDLLFSPKGN   86 (566)
T ss_pred             EEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCc---EEEE-e--ccceeeeeeeccccc
Confidence            35666554444333333   33467788999998777664 5778888764321   1111 1  112456677777776


Q ss_pred             EEEEE-----eC-----CCeEEEEECCCcceeeecc----------------------------------------cCcc
Q psy14961         79 QILTG-----SG-----DCTCALWDVESSQLLQSFH----------------------------------------GHTG  108 (320)
Q Consensus        79 ~l~s~-----~~-----dg~v~iwd~~~~~~~~~~~----------------------------------------~~~~  108 (320)
                      +|.+-     ..     .-.+++|+++++.....+.                                        -|..
T Consensus        87 yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~  166 (566)
T KOG2315|consen   87 YLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVS  166 (566)
T ss_pred             ccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeeeeecc
Confidence            66531     11     2345577776643221111                                        1334


Q ss_pred             ceeEEEEeeCCCCCEEEE-----EeCCCeEEEEeCCCCcE---------------EEEeccCCc--cc------------
Q psy14961        109 ELMDLDLAPSETGNTFVS-----GSSDKLVNIWDMRTGYC---------------VQSFEGHHN--LI------------  154 (320)
Q Consensus       109 ~v~~~~~~~~~~~~~l~s-----~~~dg~i~lwd~~~~~~---------------~~~~~~~~~--~~------------  154 (320)
                      .+..+.++|.+....+++     .+.-+.+++|...-+..               .-.+.....  ++            
T Consensus       167 ~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~S  246 (566)
T KOG2315|consen  167 GITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNAS  246 (566)
T ss_pred             ceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCcc
Confidence            444455555544444442     33444677776541110               000000000  00            


Q ss_pred             -cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEe
Q psy14961        155 -TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       155 -~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s  231 (320)
                       ..+..+++.++....+.-.+ .-.++|.++.|+|+|.-++.+.  +=.++.|+|++. ..+..+....    -..+-|+
T Consensus       247 YYGEq~Lyll~t~g~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df~egp----RN~~~fn  320 (566)
T KOG2315|consen  247 YYGEQTLYLLATQGESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDFPEGP----RNTAFFN  320 (566)
T ss_pred             ccccceEEEEEecCceEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeCCCCC----ccceEEC
Confidence             02345556555522222222 2367999999999998776543  456899999985 4554444332    2467799


Q ss_pred             cCCcEEEEEeC---CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC------CCceEeeecchH
Q psy14961        232 VSGRLLFAGYN---DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW------DTTLRDEESKNR  296 (320)
Q Consensus       232 ~~~~~l~~g~~---dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~------D~~ir~~~~~~~  296 (320)
                      |.|++|+.++-   .|.|.+||..+.+.+..+..-.  -+-..|+|||++|+||+.      |..+++|+...+
T Consensus       321 p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~  392 (566)
T KOG2315|consen  321 PHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS  392 (566)
T ss_pred             CCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence            99999887763   5899999998877777665433  456899999999999985      677889995433

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=6.9e-11  Score=107.12  Aligned_cols=202  Identities=16%  Similarity=0.125  Sum_probs=126.4

Q ss_pred             eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC---CCeEEEEECCCcceeeecccCccceeEEEEeeC
Q psy14961         42 KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG---DCTCALWDVESSQLLQSFHGHTGELMDLDLAPS  118 (320)
Q Consensus        42 ~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  118 (320)
                      .|.++|.+.     .....+..|...+.+..|+++++.|+..+.   +..|.+||+.+++.. .+..+.+.+....|  +
T Consensus       183 ~l~~~d~dg-----~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~--S  254 (435)
T PRK05137        183 RLAIMDQDG-----ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRF--S  254 (435)
T ss_pred             EEEEECCCC-----CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEE--C
Confidence            566666532     222345567778999999999998877653   468999999887653 23334445555555  5


Q ss_pred             CCCCEEE-EEeCCCe--EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE
Q psy14961        119 ETGNTFV-SGSSDKL--VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT  195 (320)
Q Consensus       119 ~~~~~l~-s~~~dg~--i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s  195 (320)
                      |+|+.|+ +.+.++.  |.+||+.++..                            ..+..+.....+.+|+|+|+.++.
T Consensus       255 PDG~~la~~~~~~g~~~Iy~~d~~~~~~----------------------------~~Lt~~~~~~~~~~~spDG~~i~f  306 (435)
T PRK05137        255 PDGRKVVMSLSQGGNTDIYTMDLRSGTT----------------------------TRLTDSPAIDTSPSYSPDGSQIVF  306 (435)
T ss_pred             CCCCEEEEEEecCCCceEEEEECCCCce----------------------------EEccCCCCccCceeEcCCCCEEEE
Confidence            5787765 4555544  55556554432                            112223334556899999998877


Q ss_pred             eeC-CC--eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCCceeE
Q psy14961        196 GSD-DA--TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHENRVSC  269 (320)
Q Consensus       196 ~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~~i~~  269 (320)
                      .+. +|  .|.++|+..++.........   ......|+|+|+.|+....+   ..|.+||...... ..+ .....+..
T Consensus       307 ~s~~~g~~~Iy~~d~~g~~~~~lt~~~~---~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~l-t~~~~~~~  381 (435)
T PRK05137        307 ESDRSGSPQLYVMNADGSNPRRISFGGG---RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RIL-TSGFLVEG  381 (435)
T ss_pred             EECCCCCCeEEEEECCCCCeEEeecCCC---cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eec-cCCCCCCC
Confidence            663 33  68888887654433222111   12456799999999886543   3677888654332 222 22335678


Q ss_pred             EEECcCCCeEEEecC
Q psy14961        270 LQVSPDGTAFSSGSW  284 (320)
Q Consensus       270 i~~s~~~~~l~s~s~  284 (320)
                      +.|+|||++|+..+.
T Consensus       382 p~~spDG~~i~~~~~  396 (435)
T PRK05137        382 PTWAPNGRVIMFFRQ  396 (435)
T ss_pred             CeECCCCCEEEEEEc
Confidence            999999999876654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=1.1e-10  Score=105.29  Aligned_cols=212  Identities=12%  Similarity=0.089  Sum_probs=127.7

Q ss_pred             eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe---CCCeEEEEECCCcceeeecccCccceeEEEEeeC
Q psy14961         42 KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS---GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS  118 (320)
Q Consensus        42 ~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  118 (320)
                      .|.++|.+...     ...+..+...+.+..|+|+++.|+..+   .+..+.+|++.+++.... ....+.+....|  +
T Consensus       180 ~l~~~d~dg~~-----~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~--S  251 (429)
T PRK03629        180 ELRVSDYDGYN-----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAF--S  251 (429)
T ss_pred             eEEEEcCCCCC-----CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEE--C
Confidence            57777664221     123344556788999999999887654   245789999988754321 112222333455  5


Q ss_pred             CCCCEEEEE-eCCC--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE
Q psy14961        119 ETGNTFVSG-SSDK--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT  195 (320)
Q Consensus       119 ~~~~~l~s~-~~dg--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s  195 (320)
                      |+|+.|+.. +.+|  .|.+||+.++...                           . +..+...+...+|+|+|+.|+.
T Consensus       252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~---------------------------~-lt~~~~~~~~~~wSPDG~~I~f  303 (429)
T PRK03629        252 PDGSKLAFALSKTGSLNLYVMDLASGQIR---------------------------Q-VTDGRSNNTEPTWFPDSQNLAY  303 (429)
T ss_pred             CCCCEEEEEEcCCCCcEEEEEECCCCCEE---------------------------E-ccCCCCCcCceEECCCCCEEEE
Confidence            678888754 3344  3666666554321                           1 1122334567899999998877


Q ss_pred             eeC-CCe--EEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCCceeE
Q psy14961        196 GSD-DAT--CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHENRVSC  269 (320)
Q Consensus       196 ~s~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~~i~~  269 (320)
                      .+. ++.  |.++|+.+++.... .....  ......|+|||++|+....+   ..|.+||+.++... .+.. ......
T Consensus       304 ~s~~~g~~~Iy~~d~~~g~~~~l-t~~~~--~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~-~~~~~~  378 (429)
T PRK03629        304 TSDQAGRPQVYKVNINGGAPQRI-TWEGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTD-TFLDET  378 (429)
T ss_pred             EeCCCCCceEEEEECCCCCeEEe-ecCCC--CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCC-CCCCCC
Confidence            665 344  44456665543322 21111  12457799999998876543   35788897765432 2322 122356


Q ss_pred             EEECcCCCeEEEecCCCc---eEeeecc
Q psy14961        270 LQVSPDGTAFSSGSWDTT---LRDEESK  294 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D~~---ir~~~~~  294 (320)
                      ..|+|||++|+.++.|+.   +.+++..
T Consensus       379 p~~SpDG~~i~~~s~~~~~~~l~~~~~~  406 (429)
T PRK03629        379 PSIAPNGTMVIYSSSQGMGSVLNLVSTD  406 (429)
T ss_pred             ceECCCCCEEEEEEcCCCceEEEEEECC
Confidence            889999999999998876   4455543

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.45  E-value=2.5e-11  Score=97.15  Aligned_cols=151  Identities=21%  Similarity=0.376  Sum_probs=97.3

Q ss_pred             EEEecCCCCEEEEEeC----------CCeEEEEECCC-cceeeeccc-CccceeEEEEeeCCCCCEEEE--EeCCCeEEE
Q psy14961         70 CCIFPNSDQQILTGSG----------DCTCALWDVES-SQLLQSFHG-HTGELMDLDLAPSETGNTFVS--GSSDKLVNI  135 (320)
Q Consensus        70 ~~~~~~~~~~l~s~~~----------dg~v~iwd~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s--~~~dg~i~l  135 (320)
                      .+.|+++|..|+.-..          -+...+|-++. +.....+.. ..++|.+++|.|  +|+.|++  |..++.+.+
T Consensus        10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP--~g~~favi~g~~~~~v~l   87 (194)
T PF08662_consen   10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSP--NGNEFAVIYGSMPAKVTL   87 (194)
T ss_pred             EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECc--CCCEEEEEEccCCcccEE
Confidence            3456666665543221          13345555422 233333332 345688888865  5677654  445667888


Q ss_pred             EeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC---CCeEEEEECCCCee
Q psy14961        136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD---DATCRLFDLRADKE  212 (320)
Q Consensus       136 wd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~---dg~i~iwd~~~~~~  212 (320)
                      ||++ ++.                           +..+  +...++.+.|+|+|++|+.++.   .|.+.+||.+..+.
T Consensus        88 yd~~-~~~---------------------------i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~  137 (194)
T PF08662_consen   88 YDVK-GKK---------------------------IFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK  137 (194)
T ss_pred             EcCc-ccE---------------------------eEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence            8875 222                           2222  2346788999999999998864   46799999998777


Q ss_pred             EeEEecCcceeeeEEEEEecCCcEEEEEeC------CCeEEEEcCCCCeEE
Q psy14961        213 VACYKKDSILFGATSVDFSVSGRLLFAGYN------DYTINVWDSLKCCRV  257 (320)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~------dg~v~~wd~~~~~~~  257 (320)
                      +...+..    .++.++|+|+|++++++..      |+.++||+.. ++.+
T Consensus       138 i~~~~~~----~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  138 ISTFEHS----DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             eeccccC----cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEe
Confidence            6555433    3578999999999999874      6778999864 4444

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=4.9e-11  Score=107.68  Aligned_cols=190  Identities=14%  Similarity=0.081  Sum_probs=117.9

Q ss_pred             ccccccCeEEEEecCCCCEEEEEeCC---CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEE
Q psy14961         61 VATHTSFISCCIFPNSDQQILTGSGD---CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIW  136 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lw  136 (320)
                      +..+...+.+..|+|+++.|+..+.+   ..|.+||+.+++... +....+......|  +|+|+.|+ +.+.++...+|
T Consensus       191 l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~--SPDG~~la~~~~~~g~~~Iy  267 (427)
T PRK02889        191 ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAW--SPDGRTLAVALSRDGNSQIY  267 (427)
T ss_pred             eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEE--CCCCCEEEEEEccCCCceEE
Confidence            44566778889999999988876642   459999998876533 2222333344555  56788776 55667765555


Q ss_pred             eC--CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEEC--CCCe
Q psy14961        137 DM--RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDL--RADK  211 (320)
Q Consensus       137 d~--~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~--~~~~  211 (320)
                      .+  ..+.                            ...+..+.....+..|+|||+.++..+. ++...+|.+  .+++
T Consensus       268 ~~d~~~~~----------------------------~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~  319 (427)
T PRK02889        268 TVNADGSG----------------------------LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA  319 (427)
T ss_pred             EEECCCCC----------------------------cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence            43  2221                            1112223333456789999998876654 466666654  4443


Q ss_pred             eEeEEecCcceeeeEEEEEecCCcEEEEEeCCC---eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        212 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDY---TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      ..... ....  ......|||+|++|+..+.++   .|.+||...+... .+.. ........|+|||++|+.++.++
T Consensus       320 ~~~lt-~~g~--~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~-~~~~~~p~~spdg~~l~~~~~~~  392 (427)
T PRK02889        320 AQRVT-FTGS--YNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTD-TTRDESPSFAPNGRYILYATQQG  392 (427)
T ss_pred             eEEEe-cCCC--CcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccC-CCCccCceECCCCCEEEEEEecC
Confidence            22221 1111  123567999999998876543   6999998765433 2322 23346789999999988887655

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=7.4e-11  Score=106.79  Aligned_cols=212  Identities=12%  Similarity=0.040  Sum_probs=129.1

Q ss_pred             eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC---CCeEEEEECCCcceeeecccCccceeEEEEeeC
Q psy14961         42 KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG---DCTCALWDVESSQLLQSFHGHTGELMDLDLAPS  118 (320)
Q Consensus        42 ~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  118 (320)
                      .|.+||.+.     .....+..+...+.+..|+++++.|+..+.   +..|.+||+.+++... +....+......|  +
T Consensus       185 ~l~i~D~~g-----~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~--S  256 (433)
T PRK04922        185 ALQVADSDG-----YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSF--S  256 (433)
T ss_pred             EEEEECCCC-----CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceE--C
Confidence            577776532     122334556677888999999998887763   3469999998776532 2222333333445  5


Q ss_pred             CCCCEEE-EEeCCC--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE
Q psy14961        119 ETGNTFV-SGSSDK--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT  195 (320)
Q Consensus       119 ~~~~~l~-s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s  195 (320)
                      ++|+.++ +.+.+|  .|.+||+.++...                            .+..+.......+|+|+|+.++.
T Consensus       257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~----------------------------~lt~~~~~~~~~~~spDG~~l~f  308 (433)
T PRK04922        257 PDGRRLALTLSRDGNPEIYVMDLGSRQLT----------------------------RLTNHFGIDTEPTWAPDGKSIYF  308 (433)
T ss_pred             CCCCEEEEEEeCCCCceEEEEECCCCCeE----------------------------ECccCCCCccceEECCCCCEEEE
Confidence            6787765 444444  4666666554321                            12223333456899999998877


Q ss_pred             ee-CCCe--EEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC---eEEEEcCCCCeEEEEeecCCCceeE
Q psy14961        196 GS-DDAT--CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY---TINVWDSLKCCRVNHLMGHENRVSC  269 (320)
Q Consensus       196 ~s-~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~h~~~i~~  269 (320)
                      ++ .+|.  |.++|+.+++.... .....  .....+|+|+|++|+..+.++   .|.+||..++... .+ .+......
T Consensus       309 ~sd~~g~~~iy~~dl~~g~~~~l-t~~g~--~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~L-t~~~~~~~  383 (433)
T PRK04922        309 TSDRGGRPQIYRVAASGGSAERL-TFQGN--YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TL-TPGSLDES  383 (433)
T ss_pred             EECCCCCceEEEEECCCCCeEEe-ecCCC--CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-EC-CCCCCCCC
Confidence            66 3444  66667766543322 11111  123578999999998765432   6899998766543 23 23334567


Q ss_pred             EEECcCCCeEEEecCC---CceEeeecc
Q psy14961        270 LQVSPDGTAFSSGSWD---TTLRDEESK  294 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D---~~ir~~~~~  294 (320)
                      ..|+|||++|+..+.+   +.+.+++..
T Consensus       384 p~~spdG~~i~~~s~~~g~~~L~~~~~~  411 (433)
T PRK04922        384 PSFAPNGSMVLYATREGGRGVLAAVSTD  411 (433)
T ss_pred             ceECCCCCEEEEEEecCCceEEEEEECC
Confidence            8999999988776653   235555553

>KOG0974|consensus

Probab=99.43  E-value=1.8e-11  Score=113.78  Aligned_cols=196  Identities=16%  Similarity=0.184  Sum_probs=146.5

Q ss_pred             EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcccee--E-EEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961         71 CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM--D-LDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        71 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~--~-~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~  147 (320)
                      ..+..+..+++.+..+..+-+||...+........ .....  + +-+..+++.-++++|+.-+.|.+|+....      
T Consensus        93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~-~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d------  165 (967)
T KOG0974|consen   93 AKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQS-DERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED------  165 (967)
T ss_pred             cchhhhcceEEEEEcCceEEEEecccCceehhcCC-CceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc------
Confidence            44455667888888899999999987776655542 22221  1 11222344457888888899999986511      


Q ss_pred             ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe--EEecCcceeee
Q psy14961        148 EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA--CYKKDSILFGA  225 (320)
Q Consensus       148 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~  225 (320)
                                          ..+. .+.+|.+.|.++.++.+|.+++++|+|.++++|++.+.+...  .+.+.   ..+
T Consensus       166 --------------------n~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHs---aRv  221 (967)
T KOG0974|consen  166 --------------------NKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHS---ARV  221 (967)
T ss_pred             --------------------CCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccccccc---cee
Confidence                                0111 356899999999999999999999999999999999877654  11121   234


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-CceeEEEECcCCCeEEEecCCCceEeeecchHhhhh
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-NRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQY  300 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~  300 (320)
                      ..+.|+|+  .++++++|.+.++|+.. +..+..+.+|. ..|+.++..++....+|++.|+++|+|+..++.+..
T Consensus       222 w~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~~e~  294 (967)
T KOG0974|consen  222 WACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRGLEG  294 (967)
T ss_pred             EEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcccccc
Confidence            57788888  99999999999999654 34444678885 489999999999999999999999999987776653

>KOG3881|consensus

Probab=99.42  E-value=2.6e-11  Score=101.63  Aligned_cols=214  Identities=19%  Similarity=0.199  Sum_probs=140.8

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEE-ecCCCCEEEEEeCC--CeEEEEECCCcceeeeccc----
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCI-FPNSDQQILTGSGD--CTCALWDVESSQLLQSFHG----  105 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~----  105 (320)
                      .|++|-.+|.+.+|.....+........+..+.+ +..+. .......+++|+..  ..++|||++..+.+..-+.    
T Consensus       117 ~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g-~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD  195 (412)
T KOG3881|consen  117 TLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPG-LYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPND  195 (412)
T ss_pred             EEEEEecCCcEEEEeccCCccccccceeeecCCc-eeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCc
Confidence            5777778899999987533322222333333433 33333 33344566678887  8899999987754433221    


Q ss_pred             ---Ccccee--EEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCC
Q psy14961        106 ---HTGELM--DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD  180 (320)
Q Consensus       106 ---~~~~v~--~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  180 (320)
                         ..-+|+  ++.|.+......|++++.-+.+++||.+.++                          +++..+.....+
T Consensus       196 ~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR--------------------------RPV~~fd~~E~~  249 (412)
T KOG3881|consen  196 RLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR--------------------------RPVAQFDFLENP  249 (412)
T ss_pred             cccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC--------------------------cceeEeccccCc
Confidence               112233  2334333225677888877778887776542                          344445445668


Q ss_pred             eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961        181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL  260 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~  260 (320)
                      |.++...|+|+.+++|..-|.+..+|++.++...+.-.. ...+++++..+|..++||+++-|..|+|+|+.+..++...
T Consensus       250 is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg-~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kv  328 (412)
T KOG3881|consen  250 ISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKG-ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKV  328 (412)
T ss_pred             ceeeeecCCCcEEEEecccchhheecccCceeeccccCC-ccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhh
Confidence            999999999999999999999999999998876652221 2234678889999999999999999999999885544321


Q ss_pred             ecCCCceeEEEECcC
Q psy14961        261 MGHENRVSCLQVSPD  275 (320)
Q Consensus       261 ~~h~~~i~~i~~s~~  275 (320)
                       --...+++|-+.++
T Consensus       329 -YvKs~lt~il~~~~  342 (412)
T KOG3881|consen  329 -YVKSRLTFILLRDD  342 (412)
T ss_pred             -hhhccccEEEecCC
Confidence             12334566666554

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.42  E-value=1.2e-10  Score=105.14  Aligned_cols=229  Identities=16%  Similarity=0.172  Sum_probs=132.4

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .++|.. +.....+..+...+....|+|||++|+.+..+   ..|.+|++....     ...+..+...+.+..|+++++
T Consensus       173 ~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~-----~~~~~~~~~~~~~~~~spDg~  246 (417)
T TIGR02800       173 QVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ-----REKVASFPGMNGAPAFSPDGS  246 (417)
T ss_pred             EEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC-----EEEeecCCCCccceEECCCCC
Confidence            345543 22233344455678889999999999887654   368888874321     112233445566788999998


Q ss_pred             EEE-EEeCCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-C--eEEEEeCCCCcEEEEeccCCc
Q psy14961         79 QIL-TGSGDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-K--LVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        79 ~l~-s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g--~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      .|+ +.+.++  .|.+||+.++.... +..+........|  +++|+.|+..+.. +  .|.++|+.++..         
T Consensus       247 ~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~--s~dg~~l~~~s~~~g~~~iy~~d~~~~~~---------  314 (417)
T TIGR02800       247 KLAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPGIDTEPSW--SPDGKSIAFTSDRGGSPQIYMMDADGGEV---------  314 (417)
T ss_pred             EEEEEECCCCCccEEEEECCCCCEEE-CCCCCCCCCCEEE--CCCCCEEEEEECCCCCceEEEEECCCCCE---------
Confidence            776 444444  58888988765433 3333333333445  4578877765542 2  355555543321         


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---eEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA---TCRLFDLRADKEVACYKKDSILFGATSVD  229 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  229 (320)
                                         ..+..+...+..+.|+|+|++++.++.++   .|.+||+.++.... ......   .....
T Consensus       315 -------------------~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~---~~~p~  371 (417)
T TIGR02800       315 -------------------RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV-LTDTGL---DESPS  371 (417)
T ss_pred             -------------------EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE-ccCCCC---CCCce
Confidence                               11111233456789999999998887766   78899988754332 221111   23457


Q ss_pred             EecCCcEEEEEeCCC---eEEEEcCCCCeEEEEeecCCCceeEEEE
Q psy14961        230 FSVSGRLLFAGYNDY---TINVWDSLKCCRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~h~~~i~~i~~  272 (320)
                      |+|+|++|+..+.++   .+.+.+.. +.....+..+...+..++|
T Consensus       372 ~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       372 FAPNGRMILYATTRGGRGVLGLVSTD-GRFRARLPLGNGDVREPAW  416 (417)
T ss_pred             ECCCCCEEEEEEeCCCcEEEEEEECC-CceeeECCCCCCCcCCCCC
Confidence            999999988887654   34444433 3333333333334444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2139|consensus

Probab=99.42  E-value=3.7e-10  Score=93.98  Aligned_cols=243  Identities=16%  Similarity=0.247  Sum_probs=151.5

Q ss_pred             ccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCcccc----------cccccccccCeEEEEecCCCCEEEEEeC-C
Q psy14961         19 ATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDSSAK----------KKTVATHTSFISCCIFPNSDQQILTGSG-D   86 (320)
Q Consensus        19 ~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~~~~----------~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d   86 (320)
                      ...|++++|-|.+ +-|+.|+..| |.+|..+........          .....+| .+|+++.|.+++..+++++- |
T Consensus       140 QrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gs  217 (445)
T KOG2139|consen  140 QRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGS  217 (445)
T ss_pred             hcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCc
Confidence            4579999999854 4667777655 889987532221111          1122345 67999999999999998874 6


Q ss_pred             CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECc
Q psy14961         87 CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR  166 (320)
Q Consensus        87 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~  166 (320)
                      ..|.|||+.++..+.-.....+.+.-+.|  +|||+.|+.+.-|+..++|+........                -|-+ 
T Consensus       218 ssi~iWdpdtg~~~pL~~~glgg~slLkw--SPdgd~lfaAt~davfrlw~e~q~wt~e----------------rw~l-  278 (445)
T KOG2139|consen  218 SSIMIWDPDTGQKIPLIPKGLGGFSLLKW--SPDGDVLFAATCDAVFRLWQENQSWTKE----------------RWIL-  278 (445)
T ss_pred             ceEEEEcCCCCCcccccccCCCceeeEEE--cCCCCEEEEecccceeeeehhcccceec----------------ceec-
Confidence            89999999988765433334455666777  5578999999999999999764322110                0111 


Q ss_pred             CCeeeeeecCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCe--eE----------eEE---e------cCc-cee
Q psy14961        167 TGYCVQSFEGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADK--EV----------ACY---K------KDS-ILF  223 (320)
Q Consensus       167 ~~~~~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~--~~----------~~~---~------~~~-~~~  223 (320)
                                -...|...+|+|.|..|+ +++..-  ++|.+....  ..          ...   .      ... ..-
T Consensus       279 ----------gsgrvqtacWspcGsfLLf~~sgsp--~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cg  346 (445)
T KOG2139|consen  279 ----------GSGRVQTACWSPCGSFLLFACSGSP--RLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCG  346 (445)
T ss_pred             ----------cCCceeeeeecCCCCEEEEEEcCCc--eEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccC
Confidence                      122678899999998764 444333  344432111  00          000   0      000 011


Q ss_pred             eeEEEEEecCCcEEEEEeCCC--------eEEEEcCCCCeEEEEee--cC--CCceeEEEECc---CCCeEEEecCCCce
Q psy14961        224 GATSVDFSVSGRLLFAGYNDY--------TINVWDSLKCCRVNHLM--GH--ENRVSCLQVSP---DGTAFSSGSWDTTL  288 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg--------~v~~wd~~~~~~~~~~~--~h--~~~i~~i~~s~---~~~~l~s~s~D~~i  288 (320)
                      .+.+++|+|.|.+||+-...+        .|.+||....- ..++.  +-  ...-..|.|+|   ++.+|..|-.-|.|
T Consensus       347 eaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp-~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGri  425 (445)
T KOG2139|consen  347 EAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSP-PVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRI  425 (445)
T ss_pred             ccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccC-ceEEEecccccCCCCceEEeeecccCCcEEEEEeccCce
Confidence            356899999999999976543        36678865532 22232  11  12246778887   57778888777777


Q ss_pred             Eeeecch
Q psy14961        289 RDEESKN  295 (320)
Q Consensus       289 r~~~~~~  295 (320)
                      .-+....
T Consensus       426 q~ypl~f  432 (445)
T KOG2139|consen  426 QRYPLTF  432 (445)
T ss_pred             EeeeeEE
Confidence            7666533

>KOG1354|consensus

Probab=99.42  E-value=2.2e-11  Score=100.52  Aligned_cols=251  Identities=22%  Similarity=0.333  Sum_probs=152.0

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC-cccccccccccc------------cCeEEEEecCCC--CEEEEE
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD-SSAKKKTVATHT------------SFISCCIFPNSD--QQILTG   83 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~-~~~~~~~~~~h~------------~~v~~~~~~~~~--~~l~s~   83 (320)
                      ...+.++.|...|.+|++|..+|.+-+|.-..... ......++..|.            ..|..+.|.+++  ..++..
T Consensus        25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls  104 (433)
T KOG1354|consen   25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS  104 (433)
T ss_pred             hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence            45788999999999999999999999986432111 001122233332            234556665444  356677


Q ss_pred             eCCCeEEEEECCCccee--------------------eec----------------ccCccceeEEEEeeCCCCCEEEEE
Q psy14961         84 SGDCTCALWDVESSQLL--------------------QSF----------------HGHTGELMDLDLAPSETGNTFVSG  127 (320)
Q Consensus        84 ~~dg~v~iwd~~~~~~~--------------------~~~----------------~~~~~~v~~~~~~~~~~~~~l~s~  127 (320)
                      ..|.+|++|.+......                    ..+                .+|.--+.++.+  .+|++.++|+
T Consensus       105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~--NsD~Et~lSA  182 (433)
T KOG1354|consen  105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISV--NSDKETFLSA  182 (433)
T ss_pred             cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeee--cCccceEeec
Confidence            78999999987432110                    000                123333333332  4455555554


Q ss_pred             eCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEE
Q psy14961        128 SSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFD  206 (320)
Q Consensus       128 ~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd  206 (320)
                       .|-.|.+|++.-               .|+...+-|++...    ++....-|++..|||.. +.|+-.+..|+|++-|
T Consensus       183 -DdLRINLWnlei---------------~d~sFnIVDIKP~n----mEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcD  242 (433)
T KOG1354|consen  183 -DDLRINLWNLEI---------------IDQSFNIVDIKPAN----MEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCD  242 (433)
T ss_pred             -cceeeeeccccc---------------cCCceeEEEccccC----HHHHHHHHhhhccCHhHccEEEEecCCCcEEEee
Confidence             345566676532               12233333432210    11122357899999964 5666677789999999


Q ss_pred             CCCCee------EeEEecCc--------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcC-CCCeEEEEeecCC-------
Q psy14961        207 LRADKE------VACYKKDS--------ILFGATSVDFSVSGRLLFAGYNDYTINVWDS-LKCCRVNHLMGHE-------  264 (320)
Q Consensus       207 ~~~~~~------~~~~~~~~--------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~-~~~~~~~~~~~h~-------  264 (320)
                      ++....      +..-+.++        .+..++.+.|+++|+|+++-.. -+|++||. ...+++.+..-|.       
T Consensus       243 mR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc  321 (433)
T KOG1354|consen  243 MRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLC  321 (433)
T ss_pred             chhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHH
Confidence            984321      11111111        1224678999999999988653 48999997 3445555544342       


Q ss_pred             -----Cce---eEEEECcCCCeEEEecCCCceEeee
Q psy14961        265 -----NRV---SCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       265 -----~~i---~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                           ++|   -.++||-++.+++|||+....|+++
T Consensus       322 ~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~  357 (433)
T KOG1354|consen  322 SLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN  357 (433)
T ss_pred             HHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence                 333   4578999999999999999999999

>KOG2321|consensus

Probab=99.41  E-value=6.5e-11  Score=103.80  Aligned_cols=190  Identities=16%  Similarity=0.290  Sum_probs=138.6

Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      -|+.++....|.=++++.|+.+..|....+.++++.+.+.  ..+|++|+.+|.+-.||.++...+..+.-...+-    
T Consensus       147 Dly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~--hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~----  220 (703)
T KOG2321|consen  147 DLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEE--HGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVN----  220 (703)
T ss_pred             cEEEeecCcceEEEEccccccccccccccccceeeeecCc--cceEEecccCceEEEecchhhhhheeeecccccC----
Confidence            3555555557777899999999988877788888887653  4588899999999999998876554443211100    


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC--CcE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS--GRL  236 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~  236 (320)
                                  ..........|+++.|+.+|-.++.|..+|.+.|||+++.+++....+.. ...+..+.|.+.  +..
T Consensus       221 ------------s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~-e~pi~~l~~~~~~~q~~  287 (703)
T KOG2321|consen  221 ------------SHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGY-ELPIKKLDWQDTDQQNK  287 (703)
T ss_pred             ------------CCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCC-ccceeeecccccCCCce
Confidence                        00001123358999999999999999999999999999998876554433 245667778665  334


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      +++. ....++|||..++.....+.. ...++.+++-|++-+|++|-.+..+-
T Consensus       288 v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~  338 (703)
T KOG2321|consen  288 VVSM-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMH  338 (703)
T ss_pred             EEec-chHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCcce
Confidence            4443 456799999988888776654 44599999999999999998777655

>KOG2394|consensus

Probab=99.38  E-value=7.2e-12  Score=108.83  Aligned_cols=95  Identities=16%  Similarity=0.309  Sum_probs=81.9

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      +..|+..+|+|||++||+.+.||.++||+++.+    .....+...-+...|+.|++|+++|++|++|--|.||.+..++
T Consensus       290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~----eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erR  365 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQ----ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERR  365 (636)
T ss_pred             cccccceeEcCCCceEEEEecCceEEEeeccHH----HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccce
Confidence            446788999999999999999999999998632    2233344455788999999999999999999999999999999


Q ss_pred             eeeecccCccceeEEEEee
Q psy14961         99 LLQSFHGHTGELMDLDLAP  117 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~  117 (320)
                      .+..=++|++.|..++|.|
T Consensus       366 VVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  366 VVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             EEEeccccccceeeEeecc
Confidence            9998899999999998864

>KOG2321|consensus

Probab=99.37  E-value=9.7e-11  Score=102.73  Aligned_cols=232  Identities=16%  Similarity=0.170  Sum_probs=152.1

Q ss_pred             cceEEEEEcCCCCEEEE-ecCCCeEEEEEecccCCccccccccccc--ccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         20 TWVMACAYAPSGSVVAS-GGLDNKVTVYAIALEDDSSAKKKTVATH--TSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s-~~~dg~i~v~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      ..-+.+..+|||+|+++ |-.-=.|++||+..-  +    ..+.-|  ...|.....+.+-..++.--.|++|.+..-- 
T Consensus        52 ~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL--S----LKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-  124 (703)
T KOG2321|consen   52 TASTRIKVSPDGQYLLATGTYKPQIKVYDLANL--S----LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-  124 (703)
T ss_pred             cccceeEecCCCcEEEEecccCCceEEEEcccc--e----eeeeecccccceeEEEeccchhhheEeecCceeeehhhc-
Confidence            34467889999997755 556678999998521  1    122233  3445555556665666666678888775422 


Q ss_pred             ccee-eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         97 SQLL-QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        97 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      |... ..++   ..-..++++- ++.. |++++....|.-+|+..|+.+..+                           .
T Consensus       125 G~hy~~RIP---~~GRDm~y~~-~scD-ly~~gsg~evYRlNLEqGrfL~P~---------------------------~  172 (703)
T KOG2321|consen  125 GRHYRTRIP---KFGRDMKYHK-PSCD-LYLVGSGSEVYRLNLEQGRFLNPF---------------------------E  172 (703)
T ss_pred             CeeeeeecC---cCCccccccC-CCcc-EEEeecCcceEEEEcccccccccc---------------------------c
Confidence            2211 1111   1112334432 2223 444444456777788777654333                           2


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec---------CcceeeeEEEEEecCCcEEEEEeCCCeE
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK---------DSILFGATSVDFSVSGRLLFAGYNDYTI  246 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~s~~~~~l~~g~~dg~v  246 (320)
                      -....++++..+|-...|++|+.+|.+.+||.+....+.....         ......++++.|+.+|-.+++|+.+|.|
T Consensus       173 ~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v  252 (703)
T KOG2321|consen  173 TDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSV  252 (703)
T ss_pred             cccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcE
Confidence            2345789999999888999999999999999987654433321         1122347899999999999999999999


Q ss_pred             EEEcCCCCeEEEEeecC--CCceeEEEECcC--CCeEEEecCCCceEeee
Q psy14961        247 NVWDSLKCCRVNHLMGH--ENRVSCLQVSPD--GTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       247 ~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~--~~~l~s~s~D~~ir~~~  292 (320)
                      .|||+....++.. ..|  .-+|..+.|.+.  ++.++|.. ...+|+|+
T Consensus       253 ~iyDLRa~~pl~~-kdh~~e~pi~~l~~~~~~~q~~v~S~D-k~~~kiWd  300 (703)
T KOG2321|consen  253 LIYDLRASKPLLV-KDHGYELPIKKLDWQDTDQQNKVVSMD-KRILKIWD  300 (703)
T ss_pred             EEEEcccCCceee-cccCCccceeeecccccCCCceEEecc-hHHhhhcc
Confidence            9999988877753 445  458999999885  45566653 36788998

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.37  E-value=6.7e-10  Score=100.67  Aligned_cols=221  Identities=13%  Similarity=0.118  Sum_probs=129.0

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE-EEeCCC--
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL-TGSGDC--   87 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg--   87 (320)
                      .+..+...+....|+|||+.|+..+.+   ..|.+|++....  ..   .+....+.+....|+++++.|+ +.+.+|  
T Consensus       193 ~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~--~~---~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~  267 (430)
T PRK00178        193 TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR--RE---QITNFEGLNGAPAWSPDGSKLAFVLSKDGNP  267 (430)
T ss_pred             EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC--EE---EccCCCCCcCCeEECCCCCEEEEEEccCCCc
Confidence            344456678889999999999876543   357777764321  11   1222233445678999998876 444555  


Q ss_pred             eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEE
Q psy14961         88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWD  164 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd  164 (320)
                      .|.+||+.++.... +..+........|  +++|+.++..+. ++  .|.++|+.+++....                  
T Consensus       268 ~Iy~~d~~~~~~~~-lt~~~~~~~~~~~--spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~l------------------  326 (430)
T PRK00178        268 EIYVMDLASRQLSR-VTNHPAIDTEPFW--GKDGRTLYFTSDRGGKPQIYKVNVNGGRAERV------------------  326 (430)
T ss_pred             eEEEEECCCCCeEE-cccCCCCcCCeEE--CCCCCEEEEEECCCCCceEEEEECCCCCEEEe------------------
Confidence            57778988776533 3333333333444  557887765543 33  355555544432110                  


Q ss_pred             CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961        165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                              +..+  ......+|+|+|+.++..+. ++  .|.++|+.+++.... .....   .....|+|+|++++..+
T Consensus       327 --------t~~~--~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~l-t~~~~---~~~p~~spdg~~i~~~~  392 (430)
T PRK00178        327 --------TFVG--NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRIL-TDTSL---DESPSVAPNGTMLIYAT  392 (430)
T ss_pred             --------ecCC--CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEc-cCCCC---CCCceECCCCCEEEEEE
Confidence                    0111  11234689999999876654 33  578889887654322 22111   12457999999888776


Q ss_pred             CC-C--eEEEEcCCCCeEEEEeecCCCceeEEEECcC
Q psy14961        242 ND-Y--TINVWDSLKCCRVNHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       242 ~d-g--~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~  275 (320)
                      .+ +  .+.+.+... .....+..+.+.+...+|+|-
T Consensus       393 ~~~g~~~l~~~~~~g-~~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        393 RQQGRGVLMLVSING-RVRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             ecCCceEEEEEECCC-CceEECcCCCCCcCCCccCCC
Confidence            43 3  455666543 233334445566777888873

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.37  E-value=1.1e-08  Score=89.83  Aligned_cols=246  Identities=15%  Similarity=0.134  Sum_probs=147.6

Q ss_pred             EEEEEcCCCCEEEEecC----CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCC-
Q psy14961         23 MACAYAPSGSVVASGGL----DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVES-   96 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~----dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-   96 (320)
                      .-++++|++++|.++..    ++.|..|.++..................-..+...+++++|+++. .+|.|.++++.. 
T Consensus        40 s~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~  119 (345)
T PF10282_consen   40 SWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDD  119 (345)
T ss_dssp             CCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             ceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCC
Confidence            45779999999988866    578999988643222222222222223334577788999988887 489999999976 


Q ss_pred             cceeee---cc----------cCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcE-EEEeccCCccccCCCeEE
Q psy14961         97 SQLLQS---FH----------GHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYC-VQSFEGHHNLITDDKLVN  161 (320)
Q Consensus        97 ~~~~~~---~~----------~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~-~~~~~~~~~~~~~d~~i~  161 (320)
                      +.+...   +.          ......+++.+  +|+|+++++... ...|.+|++....- +.                
T Consensus       120 g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~--~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~----------------  181 (345)
T PF10282_consen  120 GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVF--SPDGRFVYVPDLGADRVYVYDIDDDTGKLT----------------  181 (345)
T ss_dssp             SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE---TTSSEEEEEETTTTEEEEEEE-TTS-TEE----------------
T ss_pred             cccceeeeecccCCCCCcccccccccceeEEE--CCCCCEEEEEecCCCEEEEEEEeCCCceEE----------------
Confidence            332221   11          01122344444  567887776543 33577776644320 00                


Q ss_pred             EEECcCCeeeeee-cCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECC--CCee--EeEEecC---cc-eeeeEEEEEe
Q psy14961        162 IWDMRTGYCVQSF-EGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLR--ADKE--VACYKKD---SI-LFGATSVDFS  231 (320)
Q Consensus       162 iwd~~~~~~~~~~-~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~--~~~~--~~~~~~~---~~-~~~~~~~~~s  231 (320)
                              ....+ ......-+.++|+|++++++... .+++|.++++.  .+..  +......   .. ......+.++
T Consensus       182 --------~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~is  253 (345)
T PF10282_consen  182 --------PVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAIS  253 (345)
T ss_dssp             --------EEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-
T ss_pred             --------EeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEe
Confidence                    00011 11234567899999999886555 58889999987  3322  1111111   00 1135789999


Q ss_pred             cCCcEEEEEe-CCCeEEEEcCCC--C--eEEEEeecCCCceeEEEECcCCCeEEEec-CCCceEeeecc
Q psy14961        232 VSGRLLFAGY-NDYTINVWDSLK--C--CRVNHLMGHENRVSCLQVSPDGTAFSSGS-WDTTLRDEESK  294 (320)
Q Consensus       232 ~~~~~l~~g~-~dg~v~~wd~~~--~--~~~~~~~~h~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~~  294 (320)
                      |||++|+++. .++.|.+|++..  +  ..+............++++|+|++|+.+. .+++|.+++..
T Consensus       254 pdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d  322 (345)
T PF10282_consen  254 PDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDID  322 (345)
T ss_dssp             TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             cCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEe
Confidence            9999998876 567899998732  2  33333433344579999999999988776 56789988763

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG0974|consensus

Probab=99.37  E-value=3e-11  Score=112.39  Aligned_cols=197  Identities=19%  Similarity=0.291  Sum_probs=143.5

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccc-cccC-eEEE--EecCCCCEEEEEeCCCeEEEEECC
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSF-ISCC--IFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~-v~~~--~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      +|+....+..+...++.+..++.+.+||....   ... ..+.. .... ..++  .++.+.-++++|+--+.|.+|++.
T Consensus        88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~---~~~-~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~  163 (967)
T KOG0974|consen   88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNS---SVL-SKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPH  163 (967)
T ss_pred             ccccccchhhhcceEEEEEcCceEEEEecccC---cee-hhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecc
Confidence            56777778888889999999999999987421   111 11111 1111 1222  235555678889999999999986


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      -.+.-..+.+|.+.+..+.+  +.+|.++++.|.|+++++|++.+.+...                          -..-
T Consensus       164 ~dn~p~~l~GHeG~iF~i~~--s~dg~~i~s~SdDRsiRlW~i~s~~~~~--------------------------~~~f  215 (967)
T KOG0974|consen  164 EDNKPIRLKGHEGSIFSIVT--SLDGRYIASVSDDRSIRLWPIDSREVLG--------------------------CTGF  215 (967)
T ss_pred             ccCCcceecccCCceEEEEE--ccCCcEEEEEecCcceeeeecccccccC--------------------------cccc
Confidence            32222257899999988877  5579999999999999999998765321                          1123


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      +|+..|..++|+|+  .++++++|-+.++|+.+. ..+..+..+. .-.+..++.+++...++|++.|+.+++||..
T Consensus       216 gHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~-~~l~~y~~h~-g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~  288 (967)
T KOG0974|consen  216 GHSARVWACCFLPN--RIITVGEDCTCRVWGVNG-TQLEVYDEHS-GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN  288 (967)
T ss_pred             cccceeEEEEeccc--eeEEeccceEEEEEeccc-ceehhhhhhh-hcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence            69999999999998  899999999999997664 3333444332 2246778889999999999999999999864

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.36  E-value=1.1e-09  Score=98.95  Aligned_cols=191  Identities=15%  Similarity=0.079  Sum_probs=119.1

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCC---CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEE-EeCCC--eE
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGD---CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVS-GSSDK--LV  133 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~~~dg--~i  133 (320)
                      .+..+...+.+..|++++++++.+..+   ..|.+||+.+++... +..+.+.+....|  +++|+.|+. .+.++  .|
T Consensus       184 ~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~--spDg~~l~~~~~~~~~~~i  260 (417)
T TIGR02800       184 TITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAF--SPDGSKLAVSLSKDGNPDI  260 (417)
T ss_pred             EeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEE--CCCCCEEEEEECCCCCccE
Confidence            344455667888899999998876643   479999998875433 2223444444555  556776654 44443  36


Q ss_pred             EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEECCCC
Q psy14961        134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDLRAD  210 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~~~~  210 (320)
                      .+||+.++...                            .+..+.......+|+|+|+.|+..+. ++  .|.++|+.++
T Consensus       261 ~~~d~~~~~~~----------------------------~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~  312 (417)
T TIGR02800       261 YVMDLDGKQLT----------------------------RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGG  312 (417)
T ss_pred             EEEECCCCCEE----------------------------ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            66666544311                            11122223345789999998876654 33  5777888766


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC---eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY---TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      +.........   ......|+|+|++++.+..++   .|.+||..+.... .+.. .......+|+|||++|+.++.++
T Consensus       313 ~~~~l~~~~~---~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~-~~~~~~p~~spdg~~l~~~~~~~  386 (417)
T TIGR02800       313 EVRRLTFRGG---YNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTD-TGLDESPSFAPNGRMILYATTRG  386 (417)
T ss_pred             CEEEeecCCC---CccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccC-CCCCCCceECCCCCEEEEEEeCC
Confidence            5432221111   234678999999999888765   7888997764332 2222 22345678999999988877655

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.33  E-value=2.5e-09  Score=92.83  Aligned_cols=280  Identities=16%  Similarity=0.235  Sum_probs=172.4

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT   82 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s   82 (320)
                      +|+-++......+....-+|....|||.|.+|++....| |.+|.-.    .......+ .| ..|.-+.|+|.+.+|.+
T Consensus        16 f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~----~~~~l~~~-~~-~~V~~~~fSP~~kYL~t   88 (561)
T COG5354          16 FWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAAG-VECWGGP----SKAKLVRF-RH-PDVKYLDFSPNEKYLVT   88 (561)
T ss_pred             eecCccccccccccccCcchhheeecCcchheehhhccc-eEEcccc----chhheeee-ec-CCceecccCcccceeee
Confidence            566666665554554555788889999999999987755 8888642    22222222 23 46778888888888887


Q ss_pred             EeCC---------------CeEEEEECCCcceeeecccCccc--------------------------------------
Q psy14961         83 GSGD---------------CTCALWDVESSQLLQSFHGHTGE--------------------------------------  109 (320)
Q Consensus        83 ~~~d---------------g~v~iwd~~~~~~~~~~~~~~~~--------------------------------------  109 (320)
                      -+..               ..+.+||..++..+..+.....+                                      
T Consensus        89 w~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~  168 (561)
T COG5354          89 WSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPF  168 (561)
T ss_pred             eccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCch
Confidence            5433               35899999888766554432222                                      


Q ss_pred             -------eeEEEEeeCCCCCEEE-----EEeCCCeEEEEeCCCCcEEEEe------------ccCCccc-----------
Q psy14961        110 -------LMDLDLAPSETGNTFV-----SGSSDKLVNIWDMRTGYCVQSF------------EGHHNLI-----------  154 (320)
Q Consensus       110 -------v~~~~~~~~~~~~~l~-----s~~~dg~i~lwd~~~~~~~~~~------------~~~~~~~-----------  154 (320)
                             +....++|..++..|+     ..+.++.+++|.+..+..+.+.            +.....+           
T Consensus       169 ~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksn  248 (561)
T COG5354         169 KNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSN  248 (561)
T ss_pred             hhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecc
Confidence                   1112223322223332     1344556666666544333211            0000000           


Q ss_pred             ---cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe--eCCCeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961        155 ---TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG--SDDATCRLFDLRADKEVACYKKDSILFGATSVD  229 (320)
Q Consensus       155 ---~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  229 (320)
                         -.+..+.+++++.. -+....+..++|...+|.|.++.++..  ..+-.+.++|++.. ....++...    -..+.
T Consensus       249 KsyfgesnLyl~~~~e~-~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~Pe~~----rNT~~  322 (561)
T COG5354         249 KSYFGESNLYLLRITER-SIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFPEQK----RNTIF  322 (561)
T ss_pred             cceeccceEEEEeeccc-ccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEecCCcc----ccccc
Confidence               02345666666522 222222557899999999999887654  47888999999875 333332222    24567


Q ss_pred             EecCCcEEEEEeC---CCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEec------CCCceEeeecchHh
Q psy14961        230 FSVSGRLLFAGYN---DYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGS------WDTTLRDEESKNRY  297 (320)
Q Consensus       230 ~s~~~~~l~~g~~---dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s------~D~~ir~~~~~~~~  297 (320)
                      |+|.+++++.++-   .|.+.+||........ .+.+-.  .+-+.|+||++++.++.      -|..|.+|+...+.
T Consensus       323 fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         323 FSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             ccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence            9999999988664   5789999977665554 565443  45678999999988775      37889999965443

>KOG1409|consensus

Probab=99.32  E-value=5.7e-10  Score=92.30  Aligned_cols=234  Identities=16%  Similarity=0.216  Sum_probs=150.5

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      ..++.+.+.|++...-|..+=+++++.|.+++||--.   +..+....+ .....+++++.+..+...|+.|-..|++.-
T Consensus        18 ~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkr---ds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvte   94 (404)
T KOG1409|consen   18 SKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKR---DSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTE   94 (404)
T ss_pred             hhhcCchhhhhhheeccCCCCeEEccccceeeeEEec---cccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEE
Confidence            3455666778888788888889999999999999532   111111111 223466788888888889999999999998


Q ss_pred             EEC----CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE-----EeccC------Ccccc-
Q psy14961         92 WDV----ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ-----SFEGH------HNLIT-  155 (320)
Q Consensus        92 wd~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~-----~~~~~------~~~~~-  155 (320)
                      +.+    +.-..++.+..|...+..+.+.-.  .+.+++.+.|..+.--=.+.+.-+-     .....      ...+. 
T Consensus        95 fs~sedfnkm~~~r~~~~h~~~v~~~if~~~--~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd  172 (404)
T KOG1409|consen   95 FALSEDFNKMTFLKDYLAHQARVSAIVFSLT--HEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGD  172 (404)
T ss_pred             EEhhhhhhhcchhhhhhhhhcceeeEEecCC--ceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecc
Confidence            865    333445667788899988776543  4689999888776422222221110     00000      00011 


Q ss_pred             CCCeEEEE--ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        156 DDKLVNIW--DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       156 ~d~~i~iw--d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      ..+.|..-  ....-.++.++.+|...+.+++|.|....|.+|+.|..+.+||+...+.... ......-.+..+...+-
T Consensus       173 ~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~-el~gh~~kV~~l~~~~~  251 (404)
T KOG1409|consen  173 HSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAY-ELQGHNDKVQALSYAQH  251 (404)
T ss_pred             cccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceee-eeccchhhhhhhhhhhh
Confidence            12222222  2233456788999999999999999999999999999999999865443321 11111111233333445


Q ss_pred             CcEEEEEeCCCeEEEEcCC
Q psy14961        234 GRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~  252 (320)
                      -+.+.++++||.|.+||+.
T Consensus       252 t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  252 TRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             heeeeeccCCCeEEEEecc
Confidence            5678888899999999864

>KOG0280|consensus

Probab=99.32  E-value=4.8e-10  Score=90.91  Aligned_cols=241  Identities=17%  Similarity=0.155  Sum_probs=152.4

Q ss_pred             ceEEEEEc---CCCC-EEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         21 WVMACAYA---PSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        21 ~V~~~~~~---~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..+.|.   .+|. .++-+..+|.|.+|..+... +......+.....   .-.++.|++.+..++++..+|.+.+-+
T Consensus        71 ~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~-ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~  149 (339)
T KOG0280|consen   71 TEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDE-SSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY  149 (339)
T ss_pred             ccceeeeeeccCCccceeeeccccceEEEEeeccce-eeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence            44555554   3555 56777888999999765321 1122222222222   234677888888899999999999655


Q ss_pred             CCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         94 VESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        94 ~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      .....+  ++.+++|..+.+...|.. .+.+.+++|+.|+.+..||++....                 .+|.       
T Consensus       150 ~t~~~le~vq~wk~He~E~Wta~f~~-~~pnlvytGgDD~~l~~~D~R~p~~-----------------~i~~-------  204 (339)
T KOG0280|consen  150 ETEMVLEKVQTWKVHEFEAWTAKFSD-KEPNLVYTGGDDGSLSCWDIRIPKT-----------------FIWH-------  204 (339)
T ss_pred             cceeeeeecccccccceeeeeeeccc-CCCceEEecCCCceEEEEEecCCcc-----------------eeee-------
Confidence            444333  347889999999887763 3457999999999999999983220                 1111       


Q ss_pred             eeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEecCCc--EEEEEeCCCeEE
Q psy14961        172 QSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSVSGR--LLFAGYNDYTIN  247 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~~g~~dg~v~  247 (320)
                       ..+-|...|.+|.-+|. +.++++|+.|-.|++||.+. ++++..   .....++..+..+|.-.  .|+++-.+| .+
T Consensus       205 -n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~---~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~k  279 (339)
T KOG0280|consen  205 -NSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK---AKVGGGVWRIKHHPEIFHRLLAACMHNG-AK  279 (339)
T ss_pred             -cceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcccc---CccccceEEEEecchhhhHHHHHHHhcC-ce
Confidence             12237888999988874 67899999999999999983 444432   22224566777777533  333333333 44


Q ss_pred             EEcCCCC--e---EEEEeecCCCceeEEEECcCCCeEEEec-CCCceE-eee
Q psy14961        248 VWDSLKC--C---RVNHLMGHENRVSCLQVSPDGTAFSSGS-WDTTLR-DEE  292 (320)
Q Consensus       248 ~wd~~~~--~---~~~~~~~h~~~i~~i~~s~~~~~l~s~s-~D~~ir-~~~  292 (320)
                      +-+....  +   .......|.+-+..-.|..-...|||+| +|+.|| +|.
T Consensus       280 i~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl  331 (339)
T KOG0280|consen  280 ILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWL  331 (339)
T ss_pred             EEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeee
Confidence            5443322  1   2333456776666666755455789877 577655 554

>KOG1334|consensus

Probab=99.30  E-value=8e-11  Score=101.32  Aligned_cols=245  Identities=22%  Similarity=0.350  Sum_probs=174.0

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec-ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ..+..|.+-|..+-|...|..+++|+.|..|.+||...++....+ .+|...|..-.|.|..+...+++++.||.+++=.
T Consensus       136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~  215 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE  215 (559)
T ss_pred             hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence            345678999999999999999999999999999999887765544 4688888888898888788999999999999877


Q ss_pred             CC-CCcEEE--EeccCCcc----------------ccCCCeEEEEECcCCeeeeee---cCCCC---CeEEEEEcCCCC-
Q psy14961        138 MR-TGYCVQ--SFEGHHNL----------------ITDDKLVNIWDMRTGYCVQSF---EGHQS---DVNSVKFHPSGD-  191 (320)
Q Consensus       138 ~~-~~~~~~--~~~~~~~~----------------~~~d~~i~iwd~~~~~~~~~~---~~~~~---~v~~v~~~p~g~-  191 (320)
                      +. ++.+..  .+..|...                .++|+.+.-+|++.+.+...+   +.+..   ...+++.+|... 
T Consensus       216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~  295 (559)
T KOG1334|consen  216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN  295 (559)
T ss_pred             eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence            53 333321  11122111                246788888899876554433   22333   567899999654 


Q ss_pred             EEEEeeCCCeEEEEECCCCee------EeEEec----CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC--CC-----
Q psy14961        192 AVATGSDDATCRLFDLRADKE------VACYKK----DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL--KC-----  254 (320)
Q Consensus       192 ~l~s~s~dg~i~iwd~~~~~~------~~~~~~----~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~--~~-----  254 (320)
                      .+++++.|-.+++||.+.-..      +..+-.    ......++.++++.++.-|.++++|-.|.++...  .+     
T Consensus       296 ~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~  375 (559)
T KOG1334|consen  296 EFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDP  375 (559)
T ss_pred             ccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCC
Confidence            789999999999999864221      111111    1223457889999999989999999999999522  12     


Q ss_pred             -----eEEEE-eecCCC--ceeEEEE-CcCCCeEEEecCCCceEeeecch-Hhhhheee
Q psy14961        255 -----CRVNH-LMGHEN--RVSCLQV-SPDGTAFSSGSWDTTLRDEESKN-RYVQYLLR  303 (320)
Q Consensus       255 -----~~~~~-~~~h~~--~i~~i~~-s~~~~~l~s~s~D~~ir~~~~~~-~~~~~~~~  303 (320)
                           ..+.. ++||.+  .|.++-| -|...+++|||.=|-|-+|+... ...++++.
T Consensus       376 ~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Meg  434 (559)
T KOG1334|consen  376 SSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEG  434 (559)
T ss_pred             CcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhc
Confidence                 11222 678865  5777765 48899999999999999999533 33444443

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.29  E-value=2e-09  Score=97.68  Aligned_cols=217  Identities=14%  Similarity=0.154  Sum_probs=123.7

Q ss_pred             eCccceEEEEEcCCCCEEEEecC-CC--eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE-EeCCCe--EE
Q psy14961         17 MPATWVMACAYAPSGSVVASGGL-DN--KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT-GSGDCT--CA   90 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~-dg--~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~--v~   90 (320)
                      .....+....|+|||+.|+..+. ++  .|.++|+...  ........   ........|+++++.|+. .+.++.  |.
T Consensus       215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg--~~~~lt~~---~g~~~~~~wSPDG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQ--VREKVTSF---PGINGAPRFSPDGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCC--CeEEecCC---CCCcCCeeECCCCCEEEEEEeCCCCeEEE
Confidence            34456778899999998887654 33  4666665321  11111112   223346789999987764 566665  66


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                      ++|+++++... +..+........|  +++|+.++..+. ++  .|.++|+.+++...                      
T Consensus       290 ~~dl~tg~~~~-lt~~~~~~~~p~w--SpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~----------------------  344 (448)
T PRK04792        290 VVDIATKALTR-ITRHRAIDTEPSW--HPDGKSLIFTSERGGKPQIYRVNLASGKVSR----------------------  344 (448)
T ss_pred             EEECCCCCeEE-CccCCCCccceEE--CCCCCEEEEEECCCCCceEEEEECCCCCEEE----------------------
Confidence            77887776533 3333333444555  457877765543 33  34444444432111                      


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC-C
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-D  243 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-d  243 (320)
                         + ++.++  .....+|+|+|++++..+. ++  .|.++|+.+++.... .....   .....|+|+|+.|+..+. +
T Consensus       345 ---L-t~~g~--~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~l-t~~~~---d~~ps~spdG~~I~~~~~~~  414 (448)
T PRK04792        345 ---L-TFEGE--QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVL-TSTRL---DESPSVAPNGTMVIYSTTYQ  414 (448)
T ss_pred             ---E-ecCCC--CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEc-cCCCC---CCCceECCCCCEEEEEEecC
Confidence               0 11111  1234689999998876654 44  455578777654322 21111   123469999998877654 3


Q ss_pred             C--eEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        244 Y--TINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       244 g--~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      +  .+.+++. .+.....+..+.+.+...+|+|
T Consensus       415 g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        415 GKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             CceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence            3  3566675 3444444555666778888887

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.28  E-value=4.6e-08  Score=84.57  Aligned_cols=248  Identities=12%  Similarity=0.031  Sum_probs=147.7

Q ss_pred             CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC----------CCeEEEEECCCcceeeecccCcc--
Q psy14961         41 NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG----------DCTCALWDVESSQLLQSFHGHTG--  108 (320)
Q Consensus        41 g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~--  108 (320)
                      +.+.+.|.+..+    ....+..-..+-- + ++++++.++.+..          +..|.+||+.+.+.+..+.....  
T Consensus        27 ~~v~ViD~~~~~----v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~  100 (352)
T TIGR02658        27 TQVYTIDGEAGR----VLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR  100 (352)
T ss_pred             ceEEEEECCCCE----EEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch
Confidence            789998875322    1122221111111 3 7888888776554          78999999999998877663222  


Q ss_pred             ---ceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCc------------cccCCCeEEEEECcC-Ce-
Q psy14961        109 ---ELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHN------------LITDDKLVNIWDMRT-GY-  169 (320)
Q Consensus       109 ---~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~------------~~~~d~~i~iwd~~~-~~-  169 (320)
                         ......+..+++|++++....  +..+-+.|+.+++.+..+.-...            ..+.|+......+.+ ++ 
T Consensus       101 ~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~  180 (352)
T TIGR02658       101 FLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNP  180 (352)
T ss_pred             hhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCce
Confidence               111223455778999987763  67899999999988776542110            112233322221111 11 


Q ss_pred             eeee---ecCCCCCeE-EEEEcC-CCCEEEEeeCCCeEEEEECCCCee-----EeEEecC-----cceeeeEEEEEecCC
Q psy14961        170 CVQS---FEGHQSDVN-SVKFHP-SGDAVATGSDDATCRLFDLRADKE-----VACYKKD-----SILFGATSVDFSVSG  234 (320)
Q Consensus       170 ~~~~---~~~~~~~v~-~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~-----~~~~~~~-----~~~~~~~~~~~s~~~  234 (320)
                      ....   +.+...++. .-.|.+ +|.++....+ |+|.+.|+.....     ...+...     ....+..-++++|++
T Consensus       181 ~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg  259 (352)
T TIGR02658       181 KIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRAR  259 (352)
T ss_pred             EEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCC
Confidence            1111   111001110 013455 7777766665 9999999654322     1111111     111223348999999


Q ss_pred             cEEEEEe----------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEec-CCCceEeeecchH
Q psy14961        235 RLLFAGY----------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGS-WDTTLRDEESKNR  296 (320)
Q Consensus       235 ~~l~~g~----------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s-~D~~ir~~~~~~~  296 (320)
                      +.+++..          ..+.|.++|..+.+.+..+.- ...+..|+|+||++ +|.+.. .++.|.+.|.+..
T Consensus       260 ~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~  332 (352)
T TIGR02658       260 DRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG  332 (352)
T ss_pred             CEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence            9888743          225799999999988887653 44789999999999 777555 6788999996443

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.27  E-value=4.5e-08  Score=81.98  Aligned_cols=247  Identities=13%  Similarity=0.139  Sum_probs=149.8

Q ss_pred             ceEEEEEcCCCCEEEEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CCeEEEEECCC
Q psy14961         21 WVMACAYAPSGSVVASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DCTCALWDVES   96 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~   96 (320)
                      ..+=++|+|+++.|.++..   +|.|..|.++..+..............+-+-+..++++++++++.. .|.|.++-++.
T Consensus        41 nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~  120 (346)
T COG2706          41 NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQA  120 (346)
T ss_pred             CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEccc
Confidence            3456889999999988765   4788899887432222222211111222255777889999998875 58999998855


Q ss_pred             -cceee--ecccCccc----------eeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEE
Q psy14961         97 -SQLLQ--SFHGHTGE----------LMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNI  162 (320)
Q Consensus        97 -~~~~~--~~~~~~~~----------v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~i  162 (320)
                       +.+..  ....|.+.          +....+  .|++++|++..- -..|.+|++..|.....-               
T Consensus       121 dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~--tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~---------------  183 (346)
T COG2706         121 DGSLQPVVQVVKHTGSGPHERQESPHVHSANF--TPDGRYLVVPDLGTDRIFLYDLDDGKLTPAD---------------  183 (346)
T ss_pred             CCccccceeeeecCCCCCCccccCCccceeee--CCCCCEEEEeecCCceEEEEEcccCcccccc---------------
Confidence             33211  12224433          555555  456777776542 224667776654321100               


Q ss_pred             EECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCC-eeEeEEecC-------cceeeeEEEEEecC
Q psy14961        163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRAD-KEVACYKKD-------SILFGATSVDFSVS  233 (320)
Q Consensus       163 wd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~-~~~~~~~~~-------~~~~~~~~~~~s~~  233 (320)
                              ...+ .....-+.|.|||++++.+..++ +++|.+|..+.. ..+...+..       ....+...+.++||
T Consensus       184 --------~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d  254 (346)
T COG2706         184 --------PAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD  254 (346)
T ss_pred             --------cccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCC
Confidence                    0001 12334578999999999877765 999999998763 222222111       01124567889999


Q ss_pred             CcEEEEEeC-CCeEEEEcCCC--CeE--EEEeecCCCceeEEEECcCCCeEEEecCCC-ceEeeec
Q psy14961        234 GRLLFAGYN-DYTINVWDSLK--CCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDT-TLRDEES  293 (320)
Q Consensus       234 ~~~l~~g~~-dg~v~~wd~~~--~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~-~ir~~~~  293 (320)
                      |++|.++.. ...|.+|.+..  +..  +.....+...-....|+|.|++|+.+.+|+ .|.++..
T Consensus       255 GrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~  320 (346)
T COG2706         255 GRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFER  320 (346)
T ss_pred             CCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEE
Confidence            999998852 34677775433  221  222233444578999999999999888643 4777764

>KOG1354|consensus

Probab=99.26  E-value=3.8e-10  Score=93.37  Aligned_cols=227  Identities=14%  Similarity=0.192  Sum_probs=143.3

Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----eeeecccC------------ccceeEEEEeeCCCCCEEEEE
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----LLQSFHGH------------TGELMDLDLAPSETGNTFVSG  127 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~------------~~~v~~~~~~~~~~~~~l~s~  127 (320)
                      ...+.++.|...|++|++|..+|.|.++.-+...     ....++.|            ...|..+.+....+...++..
T Consensus        25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls  104 (433)
T KOG1354|consen   25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS  104 (433)
T ss_pred             hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence            4668889999999999999999999999643321     12223222            245666777776667788889


Q ss_pred             eCCCeEEEEeCCCCcEEE-Eec-cCCccccCCCeEEEEECcC------Ceeeeee-cCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        128 SSDKLVNIWDMRTGYCVQ-SFE-GHHNLITDDKLVNIWDMRT------GYCVQSF-EGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       128 ~~dg~i~lwd~~~~~~~~-~~~-~~~~~~~~d~~i~iwd~~~------~~~~~~~-~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      +.|.+|++|.+....... .+. ........-..+++--+..      ..|...+ .+|.--|++++++.|+..++|+. 
T Consensus       105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD-  183 (433)
T KOG1354|consen  105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD-  183 (433)
T ss_pred             cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc-
Confidence            999999999875432111 000 0000011111222211111      1122222 35777799999999999888774 


Q ss_pred             CCeEEEEECCCCee---EeEEecCcc---eeeeEEEEEecC-CcEEEEEeCCCeEEEEcCCCCeE------EEE------
Q psy14961        199 DATCRLFDLRADKE---VACYKKDSI---LFGATSVDFSVS-GRLLFAGYNDYTINVWDSLKCCR------VNH------  259 (320)
Q Consensus       199 dg~i~iwd~~~~~~---~~~~~~~~~---~~~~~~~~~s~~-~~~l~~g~~dg~v~~wd~~~~~~------~~~------  259 (320)
                      |=.|.+|++.-...   +...++...   .-.+++..|+|. ...++..++.|+|++-|++..-.      +..      
T Consensus       184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~  263 (433)
T KOG1354|consen  184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS  263 (433)
T ss_pred             ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence            77899999753222   112222211   123678899995 46778888999999999873211      110      


Q ss_pred             ----eecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        260 ----LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       260 ----~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                          +.+-...|+.+.|+++|++++|=++ -++++||.
T Consensus       264 ~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~  300 (433)
T KOG1354|consen  264 SRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDL  300 (433)
T ss_pred             chhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEec
Confidence                1122346899999999999998665 78999996

>KOG1064|consensus

Probab=99.25  E-value=4.7e-11  Score=116.56  Aligned_cols=221  Identities=16%  Similarity=0.256  Sum_probs=153.1

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL   99 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~   99 (320)
                      ..|.++.-+|-..+-+||+.||.+++|.-...+. .....+ .+. +.|+.+.|..+|+.+..+..||.+.+|.+. .++
T Consensus      2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~-v~~~rt-~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~ 2284 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQ-VVCFRT-AGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKP 2284 (2439)
T ss_pred             CceeeecCCCCCceEEecCCCceEEEEeccCCCe-EEEeec-cCc-chhhhhhhcccCCceeeeccCCceeecccC-Ccc
Confidence            4567777889888999999999999997543221 111112 233 678888999999999999999999999987 666


Q ss_pred             eeecccCccceeEEEEeeCCCCCEEEEEe---CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961        100 LQSFHGHTGELMDLDLAPSETGNTFVSGS---SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus       100 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~~---~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      ....+.|........|..    ..+++++   .++.+.+||..-..                        ...++.  ..
T Consensus      2285 ~~s~qchnk~~~Df~Fi~----s~~~tag~s~d~~n~~lwDtl~~~------------------------~~s~v~--~~ 2334 (2439)
T KOG1064|consen 2285 YTSWQCHNKALSDFRFIG----SLLATAGRSSDNRNVCLWDTLLPP------------------------MNSLVH--TC 2334 (2439)
T ss_pred             eeccccCCccccceeeee----hhhhccccCCCCCcccchhcccCc------------------------ccceee--ee
Confidence            667777877776666543    3455543   35667777743210                        011222  45


Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR  256 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~  256 (320)
                      |...++++++-|....|++|+++|.+++||++..+....++.           ++ ...++++|+..|.++||++.....
T Consensus      2335 H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-----------~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2335 HDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-----------LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred             cCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-----------hh-hhheeeccCcccceEEEEccccch
Confidence            888999999999999999999999999999987665433322           23 456899999999999999877655


Q ss_pred             EEEee---cCCCc--e--eEEEECcCCCeEEEecCCCc
Q psy14961        257 VNHLM---GHENR--V--SCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       257 ~~~~~---~h~~~--i--~~i~~s~~~~~l~s~s~D~~  287 (320)
                      +.++.   +|.+-  .  ..+-.-+ +..|.+|+.|++
T Consensus      2403 l~~~p~e~ak~gfFr~~g~Q~~v~~-~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2403 LHTFPSEHAKQGFFRNIGMQINVGQ-CNRIFSCGADGT 2439 (2439)
T ss_pred             hhcCchhhcccchhhhcCceeeecc-CceEEEecCCCC
Confidence            55443   12110  1  2333333 345777888874

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.25  E-value=1.9e-08  Score=89.62  Aligned_cols=246  Identities=14%  Similarity=0.100  Sum_probs=148.5

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEE-EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISC-CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG  108 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  108 (320)
                      ++..++.++.++.+..+|....+....    .... ..+.+ ...  .+..++.++.++.+..+|.++++.+..++....
T Consensus       104 ~~~~v~v~~~~g~l~ald~~tG~~~W~----~~~~-~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~  176 (377)
T TIGR03300       104 DGGLVFVGTEKGEVIALDAEDGKELWR----AKLS-SEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTP  176 (377)
T ss_pred             cCCEEEEEcCCCEEEEEECCCCcEeee----eccC-ceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCC
Confidence            456777888889988888643222111    1111 11111 111  245778888899999999999988766543222


Q ss_pred             ceeEEE--EeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---------------Cc---------cccCCCeEEE
Q psy14961        109 ELMDLD--LAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---------------HN---------LITDDKLVNI  162 (320)
Q Consensus       109 ~v~~~~--~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---------------~~---------~~~~d~~i~i  162 (320)
                      ... +.  ..|.-.+..++.+..++.+..+|+++|+.+......               ..         ....++.+..
T Consensus       177 ~~~-~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a  255 (377)
T TIGR03300       177 ALT-LRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAA  255 (377)
T ss_pred             cee-ecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEE
Confidence            110 00  001111347788888999999999988765432100               00         0124677888


Q ss_pred             EECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961        163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       163 wd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                      +|.++++.+......  ......  ..+..++.++.||.+..+|..+++.+-.+...... ...+..  ..+..+++++.
T Consensus       256 ~d~~tG~~~W~~~~~--~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~-~~ssp~--i~g~~l~~~~~  328 (377)
T TIGR03300       256 LDLRSGRVLWKRDAS--SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR-QLTAPA--VVGGYLVVGDF  328 (377)
T ss_pred             EECCCCcEEEeeccC--CccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCC-ccccCE--EECCEEEEEeC
Confidence            999888766554311  111222  24667888889999999999988765433221100 011111  14678899999


Q ss_pred             CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961        243 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       243 dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      +|.+.++|..+++.+.++..+...+..--.-.++ .|+.++.||.+..+
T Consensus       329 ~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~-~l~v~~~dG~l~~~  376 (377)
T TIGR03300       329 EGYLHWLSREDGSFVARLKTDGSGIASPPVVVGD-GLLVQTRDGDLYAF  376 (377)
T ss_pred             CCEEEEEECCCCCEEEEEEcCCCccccCCEEECC-EEEEEeCCceEEEe
Confidence            9999999999888887777665443222222334 47788899988654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=99.25  E-value=2.5e-09  Score=96.49  Aligned_cols=270  Identities=11%  Similarity=0.181  Sum_probs=176.0

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc-----------ccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA-----------KKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~-----------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      ...+++|.....+|+.||.||.++|..++.......           ..+++.+|.+.|..+.|....+.|-+...+|-|
T Consensus        16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlI   95 (1189)
T KOG2041|consen   16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLI   95 (1189)
T ss_pred             eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceE
Confidence            567889999999999999999999998864422111           234678999999999999988999999999999


Q ss_pred             EEEECCCcceeeec--ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc---------EEEE--eccCCcc---
Q psy14961         90 ALWDVESSQLLQSF--HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY---------CVQS--FEGHHNL---  153 (320)
Q Consensus        90 ~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~---------~~~~--~~~~~~~---  153 (320)
                      .+|-+-.+.-...+  ...++-|.+++|  ..+|..+.....||.|.+=.+...+         .+..  +......   
T Consensus        96 iVWmlykgsW~EEMiNnRnKSvV~SmsW--n~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf  173 (1189)
T KOG2041|consen   96 IVWMLYKGSWCEEMINNRNKSVVVSMSW--NLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALF  173 (1189)
T ss_pred             EEEeeecccHHHHHhhCcCccEEEEEEE--cCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHHHh
Confidence            99998776543222  122344555555  4567777777777766554333221         1110  1111110   


Q ss_pred             ccCCCeEEEEECcCC-------eeee----eecCCCCCeEEEEE--------cCCCCEEEEeeCCCeEEEEECCC-CeeE
Q psy14961        154 ITDDKLVNIWDMRTG-------YCVQ----SFEGHQSDVNSVKF--------HPSGDAVATGSDDATCRLFDLRA-DKEV  213 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~-------~~~~----~~~~~~~~v~~v~~--------~p~g~~l~s~s~dg~i~iwd~~~-~~~~  213 (320)
                      .-..+.+.++|..-.       .|.-    .+......|..+.|        -|+...|+.|-.+|.+.|-.-.. ..++
T Consensus       174 ~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pv  253 (1189)
T KOG2041|consen  174 KKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPV  253 (1189)
T ss_pred             hhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCe
Confidence            124567777775421       1111    11222234556666        34677899999999888864332 2222


Q ss_pred             eEEecCcceeeeEEEEEecCCcEEEEEeCC---------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961        214 ACYKKDSILFGATSVDFSVSGRLLFAGYND---------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                       .+...   +.+..+.|+++|..||+++.+         +.|.+|.. -+..+.++......|++++|-..|-.+|.+ -
T Consensus       254 -v~dtg---m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~A-v  327 (1189)
T KOG2041|consen  254 -VVDTG---MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIA-V  327 (1189)
T ss_pred             -EEecc---cEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEE-e
Confidence             22221   235678899999999998864         35777753 245677788888899999999988888876 5


Q ss_pred             CCceEeeecchHhh
Q psy14961        285 DTTLRDEESKNRYV  298 (320)
Q Consensus       285 D~~ir~~~~~~~~~  298 (320)
                      |++|.+-+.+.-|.
T Consensus       328 dsfiyfanIRP~yk  341 (1189)
T KOG2041|consen  328 DSFIYFANIRPEYK  341 (1189)
T ss_pred             cceEEEEeecccce
Confidence            68888777665554

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=1e-08  Score=92.34  Aligned_cols=225  Identities=12%  Similarity=0.067  Sum_probs=124.4

Q ss_pred             CccceEEEEEcCCCCE--E-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-----CCeE
Q psy14961         18 PATWVMACAYAPSGSV--V-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-----DCTC   89 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~--l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----dg~v   89 (320)
                      .......-.|+|||+.  + ++...+|.-.||-.+........   +....+......|+|+|+.|+..+.     +..+
T Consensus       183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~---lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~  259 (428)
T PRK01029        183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK---ILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFI  259 (428)
T ss_pred             CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE---eecCCCCccceEECCCCCEEEEEECCCCCcceeE
Confidence            3344566789999974  2 24445555555544433222222   2222334456789999988876542     2234


Q ss_pred             EEEECCC---cceeeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEEC
Q psy14961         90 ALWDVES---SQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDM  165 (320)
Q Consensus        90 ~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~  165 (320)
                      .+|++..   +...+......+......|  +|||+.|+..+ .+|...+|.+.                         +
T Consensus       260 ~~~~~~~g~~g~~~~lt~~~~~~~~~p~w--SPDG~~Laf~s~~~g~~~ly~~~-------------------------~  312 (428)
T PRK01029        260 QSFSLETGAIGKPRRLLNEAFGTQGNPSF--SPDGTRLVFVSNKDGRPRIYIMQ-------------------------I  312 (428)
T ss_pred             EEeecccCCCCcceEeecCCCCCcCCeEE--CCCCCEEEEEECCCCCceEEEEE-------------------------C
Confidence            4567654   2332222222222233444  66788777655 45544444321                         1


Q ss_pred             cC-CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC---CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961        166 RT-GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD---ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       166 ~~-~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                      .. +.....+..+...+....|+|+|+.|+..+.+   ..|.+||+.+++........   .......|+|||+.|+...
T Consensus       313 ~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~---~~~~~p~wSpDG~~L~f~~  389 (428)
T PRK01029        313 DPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSP---ENKESPSWAIDSLHLVYSA  389 (428)
T ss_pred             cccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCC---CCccceEECCCCCEEEEEE
Confidence            00 00111122233355678999999988766543   46999999887654332221   1235678999999887544


Q ss_pred             C---CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCC
Q psy14961        242 N---DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG  276 (320)
Q Consensus       242 ~---dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~  276 (320)
                      .   ...|.++|+..+... .+....+.+...+|+|-.
T Consensus       390 ~~~g~~~L~~vdl~~g~~~-~Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        390 GNSNESELYLISLITKKTR-KIVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             CCCCCceEEEEECCCCCEE-EeecCCCcccCceecCCC
Confidence            3   346778887665433 333445567778888853

>KOG2314|consensus

Probab=99.20  E-value=1.3e-08  Score=89.28  Aligned_cols=262  Identities=17%  Similarity=0.226  Sum_probs=154.1

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-----------CCeEEEE
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-----------DCTCALW   92 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----------dg~v~iw   92 (320)
                      -+.|||.|+||+|-..-| |.+|-    +.+....+.+ .|. .|.-+.|+|...+|++-+.           ...++||
T Consensus       215 yv~wSP~GTYL~t~Hk~G-I~lWG----G~~f~r~~RF-~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IW  287 (698)
T KOG2314|consen  215 YVRWSPKGTYLVTFHKQG-IALWG----GESFDRIQRF-YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIW  287 (698)
T ss_pred             eEEecCCceEEEEEeccc-eeeec----CccHHHHHhc-cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEE
Confidence            467999999999999877 78993    2333333332 453 5788999999999987432           2689999


Q ss_pred             ECCCcceeeecccCcc--ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE----------EEe--ccCCccc----
Q psy14961         93 DVESSQLLQSFHGHTG--ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV----------QSF--EGHHNLI----  154 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~----------~~~--~~~~~~~----  154 (320)
                      |+.+|...+.|....+  .++.+ |-.+.|++++|.-.. .+|.+|+..+...+          +.|  .+..+++    
T Consensus       288 DI~tG~lkrsF~~~~~~~~~WP~-frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwt  365 (698)
T KOG2314|consen  288 DIATGLLKRSFPVIKSPYLKWPI-FRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWT  365 (698)
T ss_pred             EccccchhcceeccCCCccccce-EEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEc
Confidence            9999998887765322  23322 223456778876555 45777765431110          000  0000000    


Q ss_pred             ---------------cC-------------C---------Ce-------------------EEEEECcCCe-eeeeecCC
Q psy14961        155 ---------------TD-------------D---------KL-------------------VNIWDMRTGY-CVQSFEGH  177 (320)
Q Consensus       155 ---------------~~-------------d---------~~-------------------i~iwd~~~~~-~~~~~~~~  177 (320)
                                     ..             |         ..                   +.|+.++... ++..+ ..
T Consensus       366 pe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-el  444 (698)
T KOG2314|consen  366 PETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-EL  444 (698)
T ss_pred             ccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceee-ec
Confidence                           00             0         00                   1111111100 01111 12


Q ss_pred             CCCeEEEEEcCCCCEEEEeeC---CCeEEEEECCCC-ee-EeEEecCcceeeeEEEEEecCCcEEEEEe---CCCeEEEE
Q psy14961        178 QSDVNSVKFHPSGDAVATGSD---DATCRLFDLRAD-KE-VACYKKDSILFGATSVDFSVSGRLLFAGY---NDYTINVW  249 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~---dg~i~iwd~~~~-~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---~dg~v~~w  249 (320)
                      ...|...+|-|.|+.++.-+.   -.++.+|.+.+. .. ......+.  ..++.+.|+|.|++++.+.   ..|.+.++
T Consensus       445 ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~  522 (698)
T KOG2314|consen  445 KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFY  522 (698)
T ss_pred             chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEE
Confidence            346778999999998865543   346888877631 11 11111111  2357889999999988864   57899999


Q ss_pred             cCCCCeEE-EEeecCCCceeEEEECcCCCeEEEecC------CCceEeeecchHhh
Q psy14961        250 DSLKCCRV-NHLMGHENRVSCLQVSPDGTAFSSGSW------DTTLRDEESKNRYV  298 (320)
Q Consensus       250 d~~~~~~~-~~~~~h~~~i~~i~~s~~~~~l~s~s~------D~~ir~~~~~~~~~  298 (320)
                      |+.-.... .....|. ..+.+.|.|.|++++++|.      |.--|+|+...++.
T Consensus       523 D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll  577 (698)
T KOG2314|consen  523 DTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLL  577 (698)
T ss_pred             ecchhhhhhccCcccc-ccccceECCCCCEEEEeeehhhhccccceEEEEeecHHH
Confidence            97642222 1122343 3578999999999999984      55566777655544

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.20  E-value=2.6e-08  Score=87.70  Aligned_cols=189  Identities=14%  Similarity=0.107  Sum_probs=121.9

Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      ++-..++.|.+.|..+.+.+..+..... +.. ....++||+++++++.||.|.++|+.+++.+.++..           
T Consensus        10 V~~~~~~~v~viD~~t~~~~~~i~~~~~-~h~-~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-----------   76 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNKVVARIPTGGA-PHA-GLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-----------   76 (369)
T ss_dssp             EEEGGGTEEEEEETTT-SEEEEEE-STT-EEE-EEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE------------
T ss_pred             EEecCCCEEEEEECCCCeEEEEEcCCCC-cee-EEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-----------
Confidence            3445689999999999999888875433 322 233467899999999999999999998876655421           


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEecCcce-----eeeEEEEEecCC
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYKKDSIL-----FGATSVDFSVSG  234 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~  234 (320)
                                       .....+++++|+|+++++++ ..+.+.++|..+.+.+...+.....     ..+..+..+|..
T Consensus        77 -----------------G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~  139 (369)
T PF02239_consen   77 -----------------GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGR  139 (369)
T ss_dssp             -----------------SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSS
T ss_pred             -----------------CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCC
Confidence                             11346799999999987665 6899999999998887766433211     123456667877


Q ss_pred             cEEEEE-eCCCeEEEEcCCCCe-EEEEeecCCCceeEEEECcCCCeEEE-ecCCCceEeeecchHhhh
Q psy14961        235 RLLFAG-YNDYTINVWDSLKCC-RVNHLMGHENRVSCLQVSPDGTAFSS-GSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       235 ~~l~~g-~~dg~v~~wd~~~~~-~~~~~~~h~~~i~~i~~s~~~~~l~s-~s~D~~ir~~~~~~~~~~  299 (320)
                      ..++.. -+.+.|-+-|..... ...+............|+|++++|+. +-.+..|-+.|.++.-..
T Consensus       140 ~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v  207 (369)
T PF02239_consen  140 PEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV  207 (369)
T ss_dssp             SEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             CEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEE
Confidence            755544 456888888865543 22334444556778999999998655 455678888887665333

...

>KOG0309|consensus

Probab=99.19  E-value=5.7e-10  Score=100.75  Aligned_cols=273  Identities=18%  Similarity=0.231  Sum_probs=175.3

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc--cCeEEEEecCCC---CEEEEEeCCCeEEEEE
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT--SFISCCIFPNSD---QQILTGSGDCTCALWD   93 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~---~~l~s~~~dg~v~iwd   93 (320)
                      ..++.++..+|-|.-++.|++-| +.+.|++.......    ...|.  -.|....|++..   ..+++.+ .....+|+
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr----~l~h~tpw~vad~qws~h~a~~~wiVsts-~qkaiiwn   97 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPR----WLHHITPWQVADVQWSPHPAKPYWIVSTS-NQKAIIWN   97 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCce----eeeccCcchhcceecccCCCCceeEEecC-cchhhhhh
Confidence            46788999999999999999877 55667764433221    22222  124445665443   3455544 45666888


Q ss_pred             CCC---cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-EEEEec---------------cCCccc
Q psy14961         94 VES---SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-CVQSFE---------------GHHNLI  154 (320)
Q Consensus        94 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~---------------~~~~~~  154 (320)
                      +..   +.....+.+|...+..+.|.+. ....+++++.|..+..||+++.. .+..+.               ++...-
T Consensus        98 lA~ss~~aIef~lhghsraitd~n~~~q-~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas  176 (1081)
T KOG0309|consen   98 LAKSSSNAIEFVLHGHSRAITDINFNPQ-HPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS  176 (1081)
T ss_pred             hhcCCccceEEEEecCccceeccccCCC-CCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh
Confidence            743   3455667889999999999875 34689999999999999998753 222221               111112


Q ss_pred             cCCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec
Q psy14961        155 TDDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV  232 (320)
Q Consensus       155 ~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~  232 (320)
                      .....|.+||++.+ .+...+++|...|++++|.... ..+.+++.|+++++||.........+.... .+.+....+-|
T Consensus       177 shg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt-~~piw~~r~~P  255 (1081)
T KOG0309|consen  177 SHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTT-NFPIWRGRYLP  255 (1081)
T ss_pred             ccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccc-cCcceeccccc
Confidence            34567999999876 5777889999999999998643 357899999999999986543322111111 11223334445


Q ss_pred             CCcEEEEE-e-CCCeEEEE---------cCC-CCeEEEEeecCCCceeEEEECcCCC----------eEEEecCCCceEe
Q psy14961        233 SGRLLFAG-Y-NDYTINVW---------DSL-KCCRVNHLMGHENRVSCLQVSPDGT----------AFSSGSWDTTLRD  290 (320)
Q Consensus       233 ~~~~l~~g-~-~dg~v~~w---------d~~-~~~~~~~~~~h~~~i~~i~~s~~~~----------~l~s~s~D~~ir~  290 (320)
                      -|.-..+- . .+..+.++         +.. ..+++.+|.||++.|...-|-..+.          .|+|=|.|.++|+
T Consensus       256 fg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrl  335 (1081)
T KOG0309|consen  256 FGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRL  335 (1081)
T ss_pred             cCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEe
Confidence            44322111 1 11133333         322 2467889999999887776654332          6999999999999


Q ss_pred             eecchHhhh
Q psy14961        291 EESKNRYVQ  299 (320)
Q Consensus       291 ~~~~~~~~~  299 (320)
                      |-.......
T Consensus       336 WpI~~~i~~  344 (1081)
T KOG0309|consen  336 WPIDSQIQR  344 (1081)
T ss_pred             eeccHHHHH
Confidence            997665543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.18  E-value=3e-08  Score=89.95  Aligned_cols=190  Identities=13%  Similarity=0.049  Sum_probs=113.9

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCC---CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCC--eE
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGD---CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDK--LV  133 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg--~i  133 (320)
                      .+..+...+....|+++++.|+..+.+   ..|.+||+.+++... +....+.+....|  +|+|+.|+ +.+.+|  .|
T Consensus       193 ~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~--SpDG~~la~~~~~~g~~~I  269 (430)
T PRK00178        193 TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAW--SPDGSKLAFVLSKDGNPEI  269 (430)
T ss_pred             EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEE--CCCCCEEEEEEccCCCceE
Confidence            344566678888999999988765533   368889998876433 2222233333445  56788776 444444  45


Q ss_pred             EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEECCCC
Q psy14961        134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDLRAD  210 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~~~~  210 (320)
                      .++|+.++...                            .+..+........|+|+|+.++..+. ++  .|.++|+.++
T Consensus       270 y~~d~~~~~~~----------------------------~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g  321 (430)
T PRK00178        270 YVMDLASRQLS----------------------------RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG  321 (430)
T ss_pred             EEEECCCCCeE----------------------------EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            55666554321                            11122233456789999998765553 33  5777787766


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-C--eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYND-Y--TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-g--~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      +..... ....  ......|+|+|+.|+....+ +  .|.+||+.++... .+. +........|+|||++++-++.+
T Consensus       322 ~~~~lt-~~~~--~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt-~~~~~~~p~~spdg~~i~~~~~~  394 (430)
T PRK00178        322 RAERVT-FVGN--YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILT-DTSLDESPSVAPNGTMLIYATRQ  394 (430)
T ss_pred             CEEEee-cCCC--CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-Ecc-CCCCCCCceECCCCCEEEEEEec
Confidence            543221 1111  12346799999999877643 3  5778887765432 222 22223356899999998877654

>KOG4190|consensus

Probab=99.18  E-value=2.4e-10  Score=100.14  Aligned_cols=250  Identities=16%  Similarity=0.179  Sum_probs=161.4

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc---ccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA---KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      .+..|.+.|.+++--.+.+.++++++|.++++|.+..+.+...   +.-++..|..+|..+-|..+...++++  ||.|+
T Consensus       730 nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giH  807 (1034)
T KOG4190|consen  730 NFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIH  807 (1034)
T ss_pred             cccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcce
Confidence            4556777888887666777889999999999999865443322   344677899999999998877666654  89999


Q ss_pred             EEECCCcceeeecc-c-CccceeEEEEeeCCCCCEEEEE-eCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         91 LWDVESSQLLQSFH-G-HTGELMDLDLAPSETGNTFVSG-SSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        91 iwd~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                      +||+--++++.++. . ..+.+..+...++-+...++.| +...+++++|.+.+.....+.             +     
T Consensus       808 lWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~k-------------V-----  869 (1034)
T KOG4190|consen  808 LWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELK-------------V-----  869 (1034)
T ss_pred             eecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEE-------------e-----
Confidence            99987777665332 1 1122222222223233445444 677889999988765433321             1     


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                          -...+....+.+++..|.|+.++++-.+|.|.+.|.++++.+..+...  .+....++ .|..+.|+....|.++.
T Consensus       870 ----cna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpm--ecdllqla-apsdq~L~~saldHsla  942 (1034)
T KOG4190|consen  870 ----CNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPM--ECDLLQLA-APSDQALAQSALDHSLA  942 (1034)
T ss_pred             ----ccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcc--cchhhhhc-CchhHHHHhhcccceeE
Confidence                111234456889999999999999999999999999999866544322  12222222 35666777777788888


Q ss_pred             E-EcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        248 V-WDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       248 ~-wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      + |....+....+..+...+..-+  ..-|.-|+++..-..+++|.
T Consensus       943 VnWhaldgimh~q~kpppepahfl--qsvgpSLV~a~~Gn~lgVYa  986 (1034)
T KOG4190|consen  943 VNWHALDGIMHLQDKPPPEPAHFL--QSVGPSLVTAQNGNILGVYA  986 (1034)
T ss_pred             eeehhcCCeeeeccCCCCcchhhh--hccCceeEEeccCcEEEEEe
Confidence            8 8776665554444333222111  11245677776666667765

>KOG4497|consensus

Probab=99.17  E-value=2.3e-08  Score=82.55  Aligned_cols=276  Identities=14%  Similarity=0.157  Sum_probs=159.0

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      .+|+++-.+.--........+.++.|||||+ +|.+...+-.|.||.+....  ..   -+...+..+....|.+++++.
T Consensus        74 qvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~--~~---~~~~pK~~~kg~~f~~dg~f~  148 (447)
T KOG4497|consen   74 QVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK--GY---LLPHPKTNVKGYAFHPDGQFC  148 (447)
T ss_pred             EEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce--eE---EecccccCceeEEECCCCcee
Confidence            4788776666556665667888999999995 55667778899999885321  11   111112334556667777665


Q ss_pred             EEEeCC------------------------------------CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE
Q psy14961         81 LTGSGD------------------------------------CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF  124 (320)
Q Consensus        81 ~s~~~d------------------------------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  124 (320)
                      +..++-                                    ..+.+||-.-.-.+..++ ..-.+..+++.  |.+++|
T Consensus       149 ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~ws--P~~qfl  225 (447)
T KOG4497|consen  149 AILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWS--PCNQFL  225 (447)
T ss_pred             eeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEec--cccceE
Confidence            544321                                    122233311111111111 12344555554  457899


Q ss_pred             EEEeCCCeEEEEeCCCCcEE------EEecc-----------------CCc--cccCCCeEEEEECc-------------
Q psy14961        125 VSGSSDKLVNIWDMRTGYCV------QSFEG-----------------HHN--LITDDKLVNIWDMR-------------  166 (320)
Q Consensus       125 ~s~~~dg~i~lwd~~~~~~~------~~~~~-----------------~~~--~~~~d~~i~iwd~~-------------  166 (320)
                      +.|+.|+.+|+.|--+=+..      .++..                 +..  ....+-...+|...             
T Consensus       226 avGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~  305 (447)
T KOG4497|consen  226 AVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKV  305 (447)
T ss_pred             EeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceee
Confidence            99999999998764221110      00000                 000  00011111122111             


Q ss_pred             -CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC--CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        167 -TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD--ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       167 -~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                       +.++...+......+.-++|++|..++++-...  +.+-+||++..+.-.......   .+....|+|....|+.+...
T Consensus       306 ~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~---piraf~WdP~~prL~vctg~  382 (447)
T KOG4497|consen  306 HKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKH---PIRAFEWDPGRPRLVVCTGK  382 (447)
T ss_pred             ecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhcc---ceeEEEeCCCCceEEEEcCC
Confidence             111111222334467789999999888876543  468999998655432222211   25678899999999998888


Q ss_pred             CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        244 YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       244 g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      ..+.+|...-...+. .....-.|..+.|..+|..++-.+.|...-
T Consensus       383 srLY~W~psg~~~V~-vP~~GF~i~~l~W~~~g~~i~l~~kDafc~  427 (447)
T KOG4497|consen  383 SRLYFWAPSGPRVVG-VPKKGFNIQKLQWLQPGEFIVLCGKDAFCV  427 (447)
T ss_pred             ceEEEEcCCCceEEe-cCCCCceeeeEEecCCCcEEEEEcCCceEE
Confidence            889999765443332 222234799999999999999999987643

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.15  E-value=1.7e-07  Score=93.00  Aligned_cols=256  Identities=12%  Similarity=0.136  Sum_probs=153.4

Q ss_pred             EEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccc-----------cccccCeEEEEecCCCCEEEEEe-CCCeE
Q psy14961         23 MACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTV-----------ATHTSFISCCIFPNSDQQILTGS-GDCTC   89 (320)
Q Consensus        23 ~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~~l~s~~-~dg~v   89 (320)
                      ..++++++ +.+.++-...+.|.++|.+...  .......           ..+-..-..+.+.++++.|+.+. .++.|
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~--i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I  648 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF--IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL  648 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCE--EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence            46788874 5566776778889999864211  0000000           00111234567777777666655 45789


Q ss_pred             EEEECCCcceeeecccC-----------------ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961         90 ALWDVESSQLLQSFHGH-----------------TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      +++|+.++.. ..+.+-                 -..-..+++.+. ++..+++.+.++.|++||..++... .+.+...
T Consensus       649 r~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~-~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~  725 (1057)
T PLN02919        649 REIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPV-NEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGY  725 (1057)
T ss_pred             EEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecC-CCeEEEEECCCCeEEEEECCCCeEE-EEecCCc
Confidence            9999876543 222110                 001234555442 4556677777889999998776532 2222111


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecC------------
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKD------------  219 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~------------  219 (320)
                      ....++.       ..     ....-.....|+++|+|+.| ++-+.++.|++||+.++.........            
T Consensus       726 ~~~~~g~-------~~-----~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~  793 (1057)
T PLN02919        726 ERNLNGS-------SG-----TSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGD  793 (1057)
T ss_pred             cccCCCC-------cc-----ccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccC
Confidence            0000000       00     00011234679999999854 56667899999999865432111000            


Q ss_pred             -------cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec--------------CCCceeEEEECcCCCe
Q psy14961        220 -------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG--------------HENRVSCLQVSPDGTA  278 (320)
Q Consensus       220 -------~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~--------------h~~~i~~i~~s~~~~~  278 (320)
                             ........++++++|.++++-+.++.|++||..++.... +.+              +-.....|+++++|++
T Consensus       794 ~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t-iaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~l  872 (1057)
T PLN02919        794 HDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT-LAGTGKAGFKDGKALKAQLSEPAGLALGENGRL  872 (1057)
T ss_pred             CCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE-EeccCCcCCCCCcccccccCCceEEEEeCCCCE
Confidence                   001124578899999988888889999999987654432 222              1235789999999999


Q ss_pred             EEEecCCCceEeeecchH
Q psy14961        279 FSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       279 l~s~s~D~~ir~~~~~~~  296 (320)
                      +++.+.+.+||+|+..+.
T Consensus       873 yVaDt~Nn~Irvid~~~~  890 (1057)
T PLN02919        873 FVADTNNSLIRYLDLNKG  890 (1057)
T ss_pred             EEEECCCCEEEEEECCCC
Confidence            999999999999997543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.15  E-value=5e-07  Score=78.21  Aligned_cols=246  Identities=13%  Similarity=0.100  Sum_probs=144.9

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecC----------CCeEEEEEecccCCcccccccccc--c---ccC
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGL----------DNKVTVYAIALEDDSSAKKKTVAT--H---TSF   67 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~----------dg~i~v~~~~~~~~~~~~~~~~~~--h---~~~   67 (320)
                      +-|..+.+.+..+.....+- .+ ++||++.|..+..          +..|.+||..........  .+..  +   ...
T Consensus        31 ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i--~~p~~p~~~~~~~  106 (352)
T TIGR02658        31 TIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADI--ELPEGPRFLVGTY  106 (352)
T ss_pred             EEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEE--ccCCCchhhccCc
Confidence            44556666655555432222 24 9999998877655          788999998543221111  1110  1   122


Q ss_pred             eEEEEecCCCCEEEEEe-C-CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-CcE-
Q psy14961         68 ISCCIFPNSDQQILTGS-G-DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT-GYC-  143 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~-~-dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~-~~~-  143 (320)
                      -....+++++++++... . +..|.+.|+.+++.+..+....+.   ..+..+++.  +..-+.||......+.. |+. 
T Consensus       107 ~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~---~vy~t~e~~--~~~~~~Dg~~~~v~~d~~g~~~  181 (352)
T TIGR02658       107 PWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCY---HIFPTANDT--FFMHCRDGSLAKVGYGTKGNPK  181 (352)
T ss_pred             cceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCc---EEEEecCCc--cEEEeecCceEEEEecCCCceE
Confidence            23567899999999877 3 689999999999988876642211   111111111  11222333333211110 100 


Q ss_pred             E---EEe----------------ccCCccccCCCeEEEEECcC-----CeeeeeecC-------CCCCeEEEEEcCCCCE
Q psy14961        144 V---QSF----------------EGHHNLITDDKLVNIWDMRT-----GYCVQSFEG-------HQSDVNSVKFHPSGDA  192 (320)
Q Consensus       144 ~---~~~----------------~~~~~~~~~d~~i~iwd~~~-----~~~~~~~~~-------~~~~v~~v~~~p~g~~  192 (320)
                      .   ..+                .+....++..+.|.+.|+..     ......+..       +...+.-++++|+++.
T Consensus       182 ~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~  261 (352)
T TIGR02658       182 IKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDR  261 (352)
T ss_pred             EeeeeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCE
Confidence            0   001                12222345568888888533     222222211       2223344999999998


Q ss_pred             EEEee----------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEEEe
Q psy14961        193 VATGS----------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVNHL  260 (320)
Q Consensus       193 l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~~~  260 (320)
                      ++...          ..+.|.++|..+.+.+..+....   .+..++|+||++ +|++.. .++.|.+.|..+.+.+.+.
T Consensus       262 lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~---~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       262 IYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH---EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             EEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC---ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence            77642          22589999999988877665433   356789999999 777665 5788999999998888776

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.14  E-value=4.6e-08  Score=88.83  Aligned_cols=197  Identities=13%  Similarity=0.058  Sum_probs=112.2

Q ss_pred             ccccccCeEEEEecCCCCEEEEEeC-CC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEE-EeCCCe--EE
Q psy14961         61 VATHTSFISCCIFPNSDQQILTGSG-DC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVS-GSSDKL--VN  134 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~~~dg~--i~  134 (320)
                      +..+...+.+..|+++++.|+..+. ++  .|.+||+.+++.... ....+......|  +|+|+.|+. .+.++.  |.
T Consensus       213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l-t~~~g~~~~~~w--SPDG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV-TSFPGINGAPRF--SPDGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe-cCCCCCcCCeeE--CCCCCEEEEEEeCCCCeEEE
Confidence            4445567788899999998876543 33  588889887764322 111222223445  567887764 455553  55


Q ss_pred             EEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEECCCCe
Q psy14961        135 IWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDLRADK  211 (320)
Q Consensus       135 lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~~~~~  211 (320)
                      ++|+.+++.                            ..+..+.......+|+|+|+.++..+. ++  .|.++|+.+++
T Consensus       290 ~~dl~tg~~----------------------------~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~  341 (448)
T PRK04792        290 VVDIATKAL----------------------------TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK  341 (448)
T ss_pred             EEECCCCCe----------------------------EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            555544321                            112223334456899999998865543 44  46666777665


Q ss_pred             eEeEEecCcceeeeEEEEEecCCcEEEEEeC-CC--eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC-Cc
Q psy14961        212 EVACYKKDSILFGATSVDFSVSGRLLFAGYN-DY--TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD-TT  287 (320)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D-~~  287 (320)
                      ..... ....  .....+|+|||++|+..+. ++  .|.++|+.++... .+... .......|+|||++|+-.+.+ +.
T Consensus       342 ~~~Lt-~~g~--~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~  416 (448)
T PRK04792        342 VSRLT-FEGE--QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGK  416 (448)
T ss_pred             EEEEe-cCCC--CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCc
Confidence            43221 1111  1234679999998877654 44  3455676665432 22221 122345899999987766543 33


Q ss_pred             --eEeeec
Q psy14961        288 --LRDEES  293 (320)
Q Consensus       288 --ir~~~~  293 (320)
                        +.+.+.
T Consensus       417 ~~l~~~~~  424 (448)
T PRK04792        417 QVLAAVSI  424 (448)
T ss_pred             eEEEEEEC
Confidence              444444

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.10  E-value=2.6e-06  Score=74.93  Aligned_cols=227  Identities=14%  Similarity=0.181  Sum_probs=130.4

Q ss_pred             cceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccc----------cccccCeEEEEecCCCCEEEEEeC-CC
Q psy14961         20 TWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTV----------ATHTSFISCCIFPNSDQQILTGSG-DC   87 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~----------~~h~~~v~~~~~~~~~~~l~s~~~-dg   87 (320)
                      ..-..++++|++++|+++.. +|.+.+++++............          .......-++.++++++++++... ..
T Consensus        87 ~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D  166 (345)
T PF10282_consen   87 SSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGAD  166 (345)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTT
T ss_pred             CCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCC
Confidence            34456889999999999874 8899999986432111111111          011233557889999998887653 45


Q ss_pred             eEEEEECCCcc--ee--eeccc-CccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCC--CCcEEEEeccCCccccCCCe
Q psy14961         88 TCALWDVESSQ--LL--QSFHG-HTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMR--TGYCVQSFEGHHNLITDDKL  159 (320)
Q Consensus        88 ~v~iwd~~~~~--~~--~~~~~-~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~--~~~~~~~~~~~~~~~~~d~~  159 (320)
                      .|.+|+++...  +.  ..+.. ....-+-+.|+  +++++++... .++.|.++++.  .+.                 
T Consensus       167 ~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~--pdg~~~Yv~~e~s~~v~v~~~~~~~g~-----------------  227 (345)
T PF10282_consen  167 RVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFS--PDGKYAYVVNELSNTVSVFDYDPSDGS-----------------  227 (345)
T ss_dssp             EEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE---TTSSEEEEEETTTTEEEEEEEETTTTE-----------------
T ss_pred             EEEEEEEeCCCceEEEeeccccccCCCCcEEEEc--CCcCEEEEecCCCCcEEEEeecccCCc-----------------
Confidence            89999987654  31  12211 22333446664  4677776655 46678888776  221                 


Q ss_pred             EEEEECcCCeeeeeec-C--CCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCC--Cee--EeEEecCcceeeeEEEEEe
Q psy14961        160 VNIWDMRTGYCVQSFE-G--HQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRA--DKE--VACYKKDSILFGATSVDFS  231 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~-~--~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~~s  231 (320)
                      +....     .+..+. +  .......|+++|+|++|+++. .++.|.+++++.  ++.  +.......  ..+..+.++
T Consensus       228 ~~~~~-----~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G--~~Pr~~~~s  300 (345)
T PF10282_consen  228 LTEIQ-----TISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGG--KFPRHFAFS  300 (345)
T ss_dssp             EEEEE-----EEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESS--SSEEEEEE-
T ss_pred             eeEEE-----EeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCC--CCccEEEEe
Confidence            11110     000110 0  112567899999999986655 577899999943  222  22222111  125789999


Q ss_pred             cCCcEEEEEe-CCCeEEEEcC--CCCeEEEEee-cCCCceeEEEE
Q psy14961        232 VSGRLLFAGY-NDYTINVWDS--LKCCRVNHLM-GHENRVSCLQV  272 (320)
Q Consensus       232 ~~~~~l~~g~-~dg~v~~wd~--~~~~~~~~~~-~h~~~i~~i~~  272 (320)
                      |+|++|+++. .++.|.+|+.  .++.....-. -......||.|
T Consensus       301 ~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  301 PDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             CCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            9999999887 5678999864  4554432221 12334567765

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.08  E-value=2.7e-07  Score=90.11  Aligned_cols=234  Identities=11%  Similarity=0.118  Sum_probs=145.7

Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEE----ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALW----DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT  140 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iw----d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~  140 (320)
                      .+.|.++.|-++...++.+..+|.|-+.    +..+... ...-.-...|.+++|  +||++.|+.++.++.+.+-+ ++
T Consensus        75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~-E~VG~vd~GI~a~~W--SPD~Ella~vT~~~~l~~mt-~~  150 (928)
T PF04762_consen   75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEI-EIVGSVDSGILAASW--SPDEELLALVTGEGNLLLMT-RD  150 (928)
T ss_pred             CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCcee-EEEEEEcCcEEEEEE--CCCcCEEEEEeCCCEEEEEe-cc
Confidence            3567888888888889999999999998    5444332 222223567877777  45688999999999888765 33


Q ss_pred             CcEEEEeccCCccccCCCeEEE-EECc-C------Cee--------------eeeecCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        141 GYCVQSFEGHHNLITDDKLVNI-WDMR-T------GYC--------------VQSFEGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       141 ~~~~~~~~~~~~~~~~d~~i~i-wd~~-~------~~~--------------~~~~~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      ...+....-+..-...+..|.+ |--+ |      ++.              ...+. +...-..++|-.||.++|..+.
T Consensus       151 fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~  229 (928)
T PF04762_consen  151 FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSV  229 (928)
T ss_pred             ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEE
Confidence            3333332222222222222222 2110 0      000              01111 2334468999999999987764


Q ss_pred             ---C---CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC---CCeEEEEcCCCCeEEEEee----cCCC
Q psy14961        199 ---D---ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN---DYTINVWDSLKCCRVNHLM----GHEN  265 (320)
Q Consensus       199 ---d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~---dg~v~~wd~~~~~~~~~~~----~h~~  265 (320)
                         .   ..+++|+= .+.....-+.  ...--..++|-|.|++||+.-.   ...|.+|... +-+-.+|.    ....
T Consensus       230 ~~~~~~~R~iRVy~R-eG~L~stSE~--v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~~~~~~  305 (928)
T PF04762_consen  230 EPETGSRRVIRVYSR-EGELQSTSEP--VDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRFDPEEE  305 (928)
T ss_pred             EcCCCceeEEEEECC-CceEEecccc--CCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCCCCCCc
Confidence               3   47999984 3543322221  1111246889999999998763   4578888743 33333332    3456


Q ss_pred             ceeEEEECcCCCeEEEecCCCceEeeecchHhhhheeeeeeecCC
Q psy14961        266 RVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPT  310 (320)
Q Consensus       266 ~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~  310 (320)
                      .|..|+|++|+..||.--.|. |++|...|+  +++|++.+.-|.
T Consensus       306 ~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY--HWYLKqei~~~~  347 (928)
T PF04762_consen  306 KVIELAWNSDSEILAVWLEDR-VQLWTRSNY--HWYLKQEIRFSS  347 (928)
T ss_pred             eeeEEEECCCCCEEEEEecCC-ceEEEeeCC--EEEEEEEEEccC
Confidence            899999999999999977665 999998776  667776665443

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=2.5e-07  Score=83.44  Aligned_cols=201  Identities=12%  Similarity=0.056  Sum_probs=110.1

Q ss_pred             cccCeEEEEecCCCCE---EEEEeCCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC----eE
Q psy14961         64 HTSFISCCIFPNSDQQ---ILTGSGDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK----LV  133 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~---l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg----~i  133 (320)
                      ......+-.|+|+++.   +++...+|  .|.+.++.+++..+.. ...+......|  +|||+.|+..+. +|    .+
T Consensus       183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt-~~~g~~~~p~w--SPDG~~Laf~s~~~g~~di~~  259 (428)
T PRK01029        183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL-ALQGNQLMPTF--SPRKKLLAFISDRYGNPDLFI  259 (428)
T ss_pred             CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee-cCCCCccceEE--CCCCCEEEEEECCCCCcceeE
Confidence            3445566789999864   23555554  4666688776543221 12233333444  667888876543 22    22


Q ss_pred             EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEE--ECCC-
Q psy14961        134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLF--DLRA-  209 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iw--d~~~-  209 (320)
                      ..|++..+.                        .+.......++.......+|+|||+.|+..+ .+|...+|  ++.. 
T Consensus       260 ~~~~~~~g~------------------------~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~  315 (428)
T PRK01029        260 QSFSLETGA------------------------IGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE  315 (428)
T ss_pred             EEeecccCC------------------------CCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence            224433210                        0111111111222335679999999887665 46655555  4432 


Q ss_pred             CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEe-cC-
Q psy14961        210 DKEVACYKKDSILFGATSVDFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG-SW-  284 (320)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~-s~-  284 (320)
                      +...........  ......|||||+.|+....+   ..|.+||..++... .+......+....|+|||++|+-. .. 
T Consensus       316 g~~~~~lt~~~~--~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~wSpDG~~L~f~~~~~  392 (428)
T PRK01029        316 GQSPRLLTKKYR--NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSWAIDSLHLVYSAGNS  392 (428)
T ss_pred             ccceEEeccCCC--CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEECCCCCEEEEEECCC
Confidence            121222222111  23467899999988876543   46889998776543 333333456789999999987643 32 


Q ss_pred             -CCceEeeecc
Q psy14961        285 -DTTLRDEESK  294 (320)
Q Consensus       285 -D~~ir~~~~~  294 (320)
                       ...|..++..
T Consensus       393 g~~~L~~vdl~  403 (428)
T PRK01029        393 NESELYLISLI  403 (428)
T ss_pred             CCceEEEEECC
Confidence             2446666653

>KOG2315|consensus

Probab=99.03  E-value=1.8e-07  Score=82.39  Aligned_cols=230  Identities=17%  Similarity=0.273  Sum_probs=136.1

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCC--CEEEE-----ecCCCeEEEEEecccCCcccc-cccccccccCeEEEEe
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSG--SVVAS-----GGLDNKVTVYAIALEDDSSAK-KKTVATHTSFISCCIF   73 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~--~~l~s-----~~~dg~i~v~~~~~~~~~~~~-~~~~~~h~~~v~~~~~   73 (320)
                      +|++....+-+ ...++...++.+.+||.+  ..||+     .|.-+.+++|....+...... .+.+ .....|. ..|
T Consensus       149 ~f~~~~~f~~~-~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksF-Fkadkvq-m~W  225 (566)
T KOG2315|consen  149 QFYDLGSFKTI-QHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSF-FKADKVQ-MKW  225 (566)
T ss_pred             EEEecCCccce-eeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccc-cccceeE-EEe
Confidence            45665553332 234567788899999864  34443     356678999976521111111 1111 1123333 334


Q ss_pred             cCCCC-EEEEEeC--C---------CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEE--EeCCCeEEEEeCC
Q psy14961         74 PNSDQ-QILTGSG--D---------CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVS--GSSDKLVNIWDMR  139 (320)
Q Consensus        74 ~~~~~-~l~s~~~--d---------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s--~~~dg~i~lwd~~  139 (320)
                      ...+. .|+.++.  |         .++++.+++....+..+. ..++|+++.|.++  +.-|+.  |-.-..+.++|++
T Consensus       226 N~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s--~~EF~VvyGfMPAkvtifnlr  302 (566)
T KOG2315|consen  226 NKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPS--GREFAVVYGFMPAKVTIFNLR  302 (566)
T ss_pred             ccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCC--CCEEEEEEecccceEEEEcCC
Confidence            43343 3332221  2         367777777545544444 4789999999765  544443  4455567777776


Q ss_pred             CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC---CCeEEEEECCCCeeEeEE
Q psy14961        140 TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD---DATCRLFDLRADKEVACY  216 (320)
Q Consensus       140 ~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~---dg~i~iwd~~~~~~~~~~  216 (320)
                      ... +                  +|+           ..++=+++-|+|.|++++.++-   -|.+.+||+...+.+..+
T Consensus       303 ~~~-v------------------~df-----------~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~  352 (566)
T KOG2315|consen  303 GKP-V------------------FDF-----------PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKF  352 (566)
T ss_pred             CCE-e------------------EeC-----------CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccc
Confidence            421 1                  122           2334578899999999887764   578999999887666554


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeC------CCeEEEEcCCCCeEEEEeecCCC-ceeEEEECc
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYN------DYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSP  274 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~------dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~  274 (320)
                      ...    ..+-++|+|||.+++|++.      |+.++||+... .++..  .+-. ....+.|-|
T Consensus       353 ~a~----~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG-~~l~~--~~f~sEL~qv~W~P  410 (566)
T KOG2315|consen  353 KAA----NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG-SLLHE--KMFKSELLQVEWRP  410 (566)
T ss_pred             ccC----CceEEEEcCCCcEEEEEeccccEEecCCeEEEEecC-ceeeh--hhhhHhHhheeeee
Confidence            433    3467899999999999975      67799998543 33321  1111 456666665

>KOG4714|consensus

Probab=99.02  E-value=7.8e-09  Score=82.66  Aligned_cols=149  Identities=19%  Similarity=0.286  Sum_probs=93.6

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEe-----CCCeEEEEECCCcceeeec
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGS-----GDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~  103 (320)
                      -++.++++..||.+.+++.+. ..  .....+. -|.+.. +..+-..++.+.++.     .-+..+.|+++....+...
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~-~~--~~~~~i~~~~~~~a-s~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~  175 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDK-DL--ALMSRIPSIHSGSA-SRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPS  175 (319)
T ss_pred             cCCceEecCCCceEEEEechH-HH--hhhhhccccccccc-ccceeecccEEecCCcceEeeccceeeeccccccccccc
Confidence            456799999999999998753 11  1111111 122221 222222344444332     1234455655443322222


Q ss_pred             ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEE
Q psy14961        104 HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNS  183 (320)
Q Consensus       104 ~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~  183 (320)
                      ......|.+++-+|.+ .+.+++|+.||.+-+||.+...                          .+...++.|+.+|..
T Consensus       176 ~~~~~~v~~l~~hp~q-q~~v~cgt~dg~~~l~d~rn~~--------------------------~p~S~l~ahk~~i~e  228 (319)
T KOG4714|consen  176 KKALDAVTALCSHPAQ-QHLVCCGTDDGIVGLWDARNVA--------------------------MPVSLLKAHKAEIWE  228 (319)
T ss_pred             ccccccchhhhCCccc-ccEEEEecCCCeEEEEEccccc--------------------------chHHHHHHhhhhhhh
Confidence            2223347778777775 3788899999999999987642                          234456779999999


Q ss_pred             EEEcCC-CCEEEEeeCCCeEEEEECCC
Q psy14961        184 VKFHPS-GDAVATGSDDATCRLFDLRA  209 (320)
Q Consensus       184 v~~~p~-g~~l~s~s~dg~i~iwd~~~  209 (320)
                      +-|||. +..|+++++||.+.-||..+
T Consensus       229 V~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  229 VHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             eeccCCCchheeEecCCCcEEEEcCCC
Confidence            999995 67899999999999999764

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.00  E-value=1.1e-06  Score=78.26  Aligned_cols=247  Identities=15%  Similarity=0.102  Sum_probs=147.8

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      .+..++.++.++.+..+|....+....    ............  .++..++.++.++.+..+|.++++.+...... +.
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~----~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~  136 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWR----VDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SE  136 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeee----ecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ce
Confidence            355788888889998888643322111    111111111111  23668888999999999999999887665432 22


Q ss_pred             eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc------------------cccCCCeEEEEECcCCeee
Q psy14961        110 LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN------------------LITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~------------------~~~~d~~i~iwd~~~~~~~  171 (320)
                      +.+   .|.-.+..++.++.++.+..||.++|+.+..++....                  ....++.+..+|.++++.+
T Consensus       137 ~~~---~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~  213 (377)
T TIGR03300       137 VLS---PPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPL  213 (377)
T ss_pred             eec---CCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEe
Confidence            221   1111245788888999999999998876654422110                  0124577888888888765


Q ss_pred             eeecCCC----CC---eEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961        172 QSFEGHQ----SD---VNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       172 ~~~~~~~----~~---v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                      .+.....    ..   ...+.-+|  .+..++.++.+|.+..+|..+++.+-......    ...  ....+..+++++.
T Consensus       214 W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~----~~~--p~~~~~~vyv~~~  287 (377)
T TIGR03300       214 WEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS----YQG--PAVDDNRLYVTDA  287 (377)
T ss_pred             eeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC----ccC--ceEeCCEEEEECC
Confidence            4322100    00   00011111  25678888889999999999887654332111    111  2235677888889


Q ss_pred             CCeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        243 DYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       243 dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +|.+..+|..+++.+-....... .......  .+..|+.++.|+.+..++..
T Consensus       288 ~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~  338 (377)
T TIGR03300       288 DGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSRE  338 (377)
T ss_pred             CCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECC
Confidence            99999999888766533321111 1222222  35688889999999999853

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG0280|consensus

Probab=98.99  E-value=9.2e-08  Score=77.89  Aligned_cols=118  Identities=20%  Similarity=0.228  Sum_probs=87.3

Q ss_pred             eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe--EEecCcceeeeEEEEEecC-CcEEEEEeCCCeEEEEcCC-CCeE
Q psy14961        181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA--CYKKDSILFGATSVDFSVS-GRLLFAGYNDYTINVWDSL-KCCR  256 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~v~~wd~~-~~~~  256 (320)
                      ..++.|++.+..+++.-.+|.+.+.+........  ..+.+  .+.+..+.|+.. ..++.+|+.|+.+..||.+ ....
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~H--e~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~  201 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVH--EFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF  201 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeeccccccc--ceeeeeeecccCCCceEEecCCCceEEEEEecCCcce
Confidence            4578999999999999889999866654332222  22222  234556777743 3688999999999999987 3333


Q ss_pred             EEE-eecCCCceeEEEECc-CCCeEEEecCCCceEeeecchHhhhh
Q psy14961        257 VNH-LMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNRYVQY  300 (320)
Q Consensus       257 ~~~-~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~~~~~  300 (320)
                      +-+ ..-|...|.+|.-+| .+.++++|++|-.||+||+++..+-.
T Consensus       202 i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl  247 (339)
T KOG0280|consen  202 IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPL  247 (339)
T ss_pred             eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcc
Confidence            322 457889999999997 78899999999999999998776543

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.99  E-value=1.4e-08  Score=83.25  Aligned_cols=228  Identities=17%  Similarity=0.239  Sum_probs=138.3

Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----eeeecccCc------------cceeEEEEeeCCCCCEEEE
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----LLQSFHGHT------------GELMDLDLAPSETGNTFVS  126 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~~~~l~s  126 (320)
                      ....|+++.|...|.++++|...|.|.+|.-+...     ....|+.|.            ..|..+.+.-...-+.++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            34678999999989999999989999999755432     122344443            3445555554333356777


Q ss_pred             EeCCCeEEEEeCCCCcE--EE------Eecc-CCccccCCCeEEEEECcCC------eeee-eecCCCCCeEEEEEcCCC
Q psy14961        127 GSSDKLVNIWDMRTGYC--VQ------SFEG-HHNLITDDKLVNIWDMRTG------YCVQ-SFEGHQSDVNSVKFHPSG  190 (320)
Q Consensus       127 ~~~dg~i~lwd~~~~~~--~~------~~~~-~~~~~~~d~~i~iwd~~~~------~~~~-~~~~~~~~v~~v~~~p~g  190 (320)
                      .+.|.+|++|.+.....  +.      .+.. ....+..-..+++-.+...      ++.+ ....|.--|++++|..+.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            78999999999865321  10      0100 0111111111111111000      0111 113577779999999998


Q ss_pred             CEEEEeeCCCeEEEEECCCCee---EeEEecCcc---eeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCCCe------EE
Q psy14961        191 DAVATGSDDATCRLFDLRADKE---VACYKKDSI---LFGATSVDFSVSG-RLLFAGYNDYTINVWDSLKCC------RV  257 (320)
Q Consensus       191 ~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~---~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~~~------~~  257 (320)
                      ..++++ .|=.|.+|++.-...   +...+++..   ...+++..|+|.. ..+...++.|.|++-|++...      .+
T Consensus       185 et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~kl  263 (460)
T COG5170         185 ETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKL  263 (460)
T ss_pred             heeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhh
Confidence            888776 477899998753222   222222211   1236788999864 455566789999999976321      11


Q ss_pred             E--E--------eecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        258 N--H--------LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       258 ~--~--------~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .  +        +.+-...|+.+.|+|+|+++++-+. -++++||.
T Consensus       264 fe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDv  308 (460)
T COG5170         264 FELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDV  308 (460)
T ss_pred             hhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEec
Confidence            1  1        1223457899999999999998877 68999995

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.99  E-value=4.2e-08  Score=80.55  Aligned_cols=270  Identities=20%  Similarity=0.342  Sum_probs=138.0

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccC-Ccccccccccccc------------cCeEEEEecCCC--CEEEEE
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALED-DSSAKKKTVATHT------------SFISCCIFPNSD--QQILTG   83 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~-~~~~~~~~~~~h~------------~~v~~~~~~~~~--~~l~s~   83 (320)
                      ...|+++.|...|.||++|...|.+.+|.-.... ....-..+++.|.            ..|..+.|-.++  ..++..
T Consensus        26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls  105 (460)
T COG5170          26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS  105 (460)
T ss_pred             cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence            4578999999999999999999999999643211 0111122344443            224455564433  356667


Q ss_pred             eCCCeEEEEECCCcce--ee------ecc-cCccceeEEE--EeeC-CCCCEEEEEeCCCeEEEEeCCCCcEEEE--ecc
Q psy14961         84 SGDCTCALWDVESSQL--LQ------SFH-GHTGELMDLD--LAPS-ETGNTFVSGSSDKLVNIWDMRTGYCVQS--FEG  149 (320)
Q Consensus        84 ~~dg~v~iwd~~~~~~--~~------~~~-~~~~~v~~~~--~~~~-~~~~~l~s~~~dg~i~lwd~~~~~~~~~--~~~  149 (320)
                      +.|.+|++|.+....+  +.      .+. +..+++.+..  ..|. +....++++..   .+++.-.....+.+  +..
T Consensus       106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p---~rvyaNaH~yhiNSiS~Ns  182 (460)
T COG5170         106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKP---CRVYANAHPYHINSISFNS  182 (460)
T ss_pred             cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEecc---ceeccccceeEeeeeeecC
Confidence            7899999998743211  00      000 0011111100  0000 00011111110   11110000001111  111


Q ss_pred             CC-ccc-cCCCeEEEEECcCC---eeeeeecCCC-----CCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee------
Q psy14961        150 HH-NLI-TDDKLVNIWDMRTG---YCVQSFEGHQ-----SDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE------  212 (320)
Q Consensus       150 ~~-~~~-~~d~~i~iwd~~~~---~~~~~~~~~~-----~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~------  212 (320)
                      .. ..+ .++-.|.+|++.--   ..+-.++.|.     .-|++..|||.. ..+.-.+..|.|++-|+++...      
T Consensus       183 D~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k  262 (460)
T COG5170         183 DKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK  262 (460)
T ss_pred             chheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence            11 011 12334444543321   1122233343     357899999964 4555566689999999984321      


Q ss_pred             EeEEecC--------cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeecC------------CCce---e
Q psy14961        213 VACYKKD--------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMGH------------ENRV---S  268 (320)
Q Consensus       213 ~~~~~~~--------~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h------------~~~i---~  268 (320)
                      +.....+        .....++.+.|+++|+++++-. --+|++||... ..++.+..-|            .++|   -
T Consensus       263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkF  341 (460)
T COG5170         263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKF  341 (460)
T ss_pred             hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeE
Confidence            1100000        1122467899999999998765 34899999654 2345444222            2334   3


Q ss_pred             EEEECcCCCeEEEecCCCceEeee
Q psy14961        269 CLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       269 ~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+.||-|.+.+.|||+....-++-
T Consensus       342 eisfSgd~~~v~sgsy~NNfgiyp  365 (460)
T COG5170         342 EISFSGDDKHVLSGSYSNNFGIYP  365 (460)
T ss_pred             EEEecCCcccccccccccceeeec
Confidence            578999999999998766554443

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.98  E-value=1.8e-09  Score=62.39  Aligned_cols=38  Identities=34%  Similarity=0.488  Sum_probs=36.0

Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +++.++.+|.++|++|+|+|++++|+|||.|++|++|+
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            56788999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1912|consensus

Probab=98.98  E-value=1.9e-07  Score=85.34  Aligned_cols=117  Identities=17%  Similarity=0.233  Sum_probs=87.7

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC------------CEEEEEeCCCe
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD------------QQILTGSGDCT   88 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~------------~~l~s~~~dg~   88 (320)
                      .-.++.|+|.| +||.|+. ..|.+-|.-    +.+..+.+..|.+.|+.+.|.+..            -.|+++...|.
T Consensus        17 N~~A~Dw~~~G-LiAygsh-slV~VVDs~----s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~Gr   90 (1062)
T KOG1912|consen   17 NRNAADWSPSG-LIAYGSH-SLVSVVDSR----SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGR   90 (1062)
T ss_pred             cccccccCccc-eEEEecC-ceEEEEehh----hhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCc
Confidence            34688899999 6677764 567777642    445667788899999999985421            24566777899


Q ss_pred             EEEEECCCcceeeecccCccceeEEEEeeCCCC--CEEEEEeCCCeEEEEeCCCCcE
Q psy14961         89 CALWDVESSQLLQSFHGHTGELMDLDLAPSETG--NTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        89 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      |.+||...+..+..+..|..++..++|.+..+.  ..|+.-.....+-+||..+|..
T Consensus        91 Iil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k  147 (1062)
T KOG1912|consen   91 IILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEK  147 (1062)
T ss_pred             EEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCce
Confidence            999999988888888888899988988776433  4666667777899998877753

>KOG4547|consensus

Probab=98.96  E-value=2.4e-07  Score=82.09  Aligned_cols=189  Identities=15%  Similarity=0.243  Sum_probs=126.5

Q ss_pred             cCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe--------------------cCCCCEEEEEeCCC
Q psy14961         28 APSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF--------------------PNSDQQILTGSGDC   87 (320)
Q Consensus        28 ~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~--------------------~~~~~~l~s~~~dg   87 (320)
                      +|...++|....||.+++|+...+..... ......-.+..++..|                    +.+...++-|...|
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e-~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g   80 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQE-FAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQG   80 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeee-eccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCc
Confidence            45567899999999999999864321111 0001111122222222                    12233567788899


Q ss_pred             eEEEEECCCcceeeecc--cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEEC
Q psy14961         88 TCALWDVESSQLLQSFH--GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDM  165 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~  165 (320)
                      .|.+|++..++.-..+.  .|.+.|.++.++.  +-..|.|++.|..+-.|+...++.++.                |. 
T Consensus        81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~--~~~ciyS~~ad~~v~~~~~~~~~~~~~----------------~~-  141 (541)
T KOG4547|consen   81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQ--RLGCIYSVGADLKVVYILEKEKVIIRI----------------WK-  141 (541)
T ss_pred             cEEEEEecCCeEEEEEecCCCCCcceeeeccc--ccCceEecCCceeEEEEecccceeeee----------------ec-
Confidence            99999999888766554  6888888776543  345899999999999999877654433                32 


Q ss_pred             cCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC-----CcEEEEE
Q psy14961        166 RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS-----GRLLFAG  240 (320)
Q Consensus       166 ~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-----~~~l~~g  240 (320)
                                ..+..+.+++.+|||..+++++  ++|++||+.+++.+..|+.+...  ++.+.|--+     |.+++++
T Consensus       142 ----------~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~--v~t~~f~~~~~g~~G~~vLss  207 (541)
T KOG4547|consen  142 ----------EQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSP--VRTLSFTTLIDGIIGKYVLSS  207 (541)
T ss_pred             ----------cCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcc--eEEEEEEEeccccccceeeec
Confidence                      2344577899999999998887  68999999999988888877654  345555544     6666555


Q ss_pred             e-CCCeEEEEc
Q psy14961        241 Y-NDYTINVWD  250 (320)
Q Consensus       241 ~-~dg~v~~wd  250 (320)
                      . .+.-+.+|-
T Consensus       208 a~~~r~i~~w~  218 (541)
T KOG4547|consen  208 AAAERGITVWV  218 (541)
T ss_pred             cccccceeEEE
Confidence            3 444566774

>KOG2695|consensus

Probab=98.95  E-value=2.3e-09  Score=88.82  Aligned_cols=130  Identities=17%  Similarity=0.245  Sum_probs=101.2

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      ..-|.++.|+..+++++.|+++|.|.++|+.-......-......|.+.|+|+.... ++++|++.+-+|+|++||..--
T Consensus       252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~  331 (425)
T KOG2695|consen  252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRAT  331 (425)
T ss_pred             chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhh
Confidence            456888999999999999999999999998532111111223446889999988755 7889999999999999998765


Q ss_pred             ce---eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         98 QL---LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        98 ~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      ++   ++++.+|...-.-+-++..+....+++++.|-..|+|.+..|..+.++.
T Consensus       332 K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip  385 (425)
T KOG2695|consen  332 KCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP  385 (425)
T ss_pred             hcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence            55   8888888765555556666666788899999999999999988776653

>KOG1409|consensus

Probab=98.95  E-value=6.9e-08  Score=80.24  Aligned_cols=208  Identities=16%  Similarity=0.261  Sum_probs=139.3

Q ss_pred             cccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE-CCCcceeeec-ccCccceeEEEEeeCCCCCEEEEEeCCCeE
Q psy14961         56 AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD-VESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLV  133 (320)
Q Consensus        56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i  133 (320)
                      .....+.+|...+.....-+..+-+++.+.|.++|+|- .+.++.-..+ .....++.++...  ++...|++|-.+|++
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~--~e~~~L~vg~~ngtv   92 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYV--SESRRLYVGQDNGTV   92 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeee--ccceEEEEEEecceE
Confidence            34556778888888766666667799999999999994 3444433222 2234555555543  345678888777777


Q ss_pred             EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961        134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV  213 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~  213 (320)
                      .-+.+...                       ............|...|..+-|+-....+++.+.|+.+.-...+.+..+
T Consensus        93 tefs~sed-----------------------fnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~l  149 (404)
T KOG1409|consen   93 TEFALSED-----------------------FNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRL  149 (404)
T ss_pred             EEEEhhhh-----------------------hhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcc
Confidence            65544221                       1111122333458889999999988889999999988866556665554


Q ss_pred             eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc--CCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961        214 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd--~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      ..+.....   .+...+...  +...|...|.|.+-.  .....++.++.+|.+++.+++|.|....|.||..|..+-+|
T Consensus       150 g~Y~~~~~---~t~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~w  224 (404)
T KOG1409|consen  150 GGYNFETP---ASALQFDAL--YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMW  224 (404)
T ss_pred             cceEeecc---CCCCceeeE--EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEE
Confidence            43322111   111222212  566666677666543  34456788899999999999999999999999999999999


Q ss_pred             ec
Q psy14961        292 ES  293 (320)
Q Consensus       292 ~~  293 (320)
                      +.
T Consensus       225 di  226 (404)
T KOG1409|consen  225 DI  226 (404)
T ss_pred             ec
Confidence            95

>KOG1064|consensus

Probab=98.95  E-value=3.3e-09  Score=104.15  Aligned_cols=192  Identities=17%  Similarity=0.189  Sum_probs=131.4

Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      +-..|.++.-.|...+.++|+.||.|++|....++.+..++. -.+.|..+.+  +..|+.+..+..||.+.+|.... +
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f--~~qGnk~~i~d~dg~l~l~q~~p-k 2283 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRF--NHQGNKFGIVDGDGDLSLWQASP-K 2283 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhh--cccCCceeeeccCCceeecccCC-c
Confidence            345566666677788999999999999999877776655542 2255655555  44688999999999999998752 1


Q ss_pred             EEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCCeeEeEEecC
Q psy14961        143 CVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       143 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~  219 (320)
                                                 +....+.|......+.|--  ..+++++   .++.+.+||..-........ .
T Consensus      2284 ---------------------------~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~ 2333 (2439)
T KOG1064|consen 2284 ---------------------------PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH-T 2333 (2439)
T ss_pred             ---------------------------ceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee-e
Confidence                                       1222233555555555553  4455554   57789999964332222111 1


Q ss_pred             cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhh
Q psy14961        220 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~  298 (320)
                      -...+++.+++.|..+.|++|+.+|.|++||+...+...++..         +. ...+|++|+..|.|++|+..+..+
T Consensus      2334 ~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2334 CHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred             ecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccch
Confidence            1123578899999999999999999999999876554444432         33 456899999999999999765543

>KOG3914|consensus

Probab=98.93  E-value=2.7e-08  Score=84.17  Aligned_cols=164  Identities=16%  Similarity=0.274  Sum_probs=105.3

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE---EEeCCCeEEEEECCCcc
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL---TGSGDCTCALWDVESSQ   98 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---s~~~dg~v~iwd~~~~~   98 (320)
                      .....+++.+++||.+..+..+.++++..................+ ..+.|-.+.....   .++....+.+|....+.
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~-~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRP-TAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCc-ceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            3456688999999999888887788775322211122222111111 1222322333333   33445666677665544


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ  178 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~  178 (320)
                      + ..+.+|.+-+..++++  +|+++++++..|..|++-....-..+..|                          ..||+
T Consensus       144 ~-~~~lGhvSml~dVavS--~D~~~IitaDRDEkIRvs~ypa~f~Iesf--------------------------clGH~  194 (390)
T KOG3914|consen  144 C-EPILGHVSMLLDVAVS--PDDQFIITADRDEKIRVSRYPATFVIESF--------------------------CLGHK  194 (390)
T ss_pred             c-chhhhhhhhhheeeec--CCCCEEEEecCCceEEEEecCcccchhhh--------------------------ccccH
Confidence            3 3345788888877775  46789999999999998766543222211                          24688


Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                      .-|..++.-++ ..|+|+|.|+++++||+.+++.+..+
T Consensus       195 eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~  231 (390)
T KOG3914|consen  195 EFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTC  231 (390)
T ss_pred             hheeeeeeccC-ceeeecCCCCcEEEEecccCCccccc
Confidence            88999999875 45899999999999999999876544

>KOG4532|consensus

Probab=98.92  E-value=2.9e-07  Score=74.16  Aligned_cols=171  Identities=11%  Similarity=0.066  Sum_probs=109.7

Q ss_pred             CEEEEEeCCCeEEEEeCCCCcEEEE-eccCCc----------------cccCCCeEEEEECcCCeeeeeecCCCCCeEEE
Q psy14961        122 NTFVSGSSDKLVNIWDMRTGYCVQS-FEGHHN----------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSV  184 (320)
Q Consensus       122 ~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~~~----------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v  184 (320)
                      ..|+.|+..|.+.+|.+.+.+.... .+.+.+                ..+.|.++++.++.-+..-.......-.++++
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~  164 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSL  164 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceeee
Confidence            4889999999999999986643221 111111                12457778887765433222221111238899


Q ss_pred             EEcCCCCEEEEeeCCCeEEEEECCCCeeE-eE-EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe-E----E
Q psy14961        185 KFHPSGDAVATGSDDATCRLFDLRADKEV-AC-YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-R----V  257 (320)
Q Consensus       185 ~~~p~g~~l~s~s~dg~i~iwd~~~~~~~-~~-~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~-~----~  257 (320)
                      +++|+++++++.+....|-+|.++..... .. +..... -..-...|+.....+|+++.||++.+||++... +    .
T Consensus       165 ~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~-D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~s  243 (344)
T KOG4532|consen  165 HYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTS-DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEIS  243 (344)
T ss_pred             EEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccC-CCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhc
Confidence            99999999999999999999988754332 11 222111 112356789999999999999999999976532 2    1


Q ss_pred             EEeecCCCceeEEEECcCCCe--EEEecCCCceEeeec
Q psy14961        258 NHLMGHENRVSCLQVSPDGTA--FSSGSWDTTLRDEES  293 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~~~~--l~s~s~D~~ir~~~~  293 (320)
                      .+-..|.+.+..+.|+|.|.+  |+-.-.=+.+.+-|+
T Consensus       244 strp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~  281 (344)
T KOG4532|consen  244 STRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDT  281 (344)
T ss_pred             ccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEc
Confidence            223458899999999986553  333333344444443

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.91  E-value=6.6e-09  Score=59.99  Aligned_cols=38  Identities=45%  Similarity=0.920  Sum_probs=36.0

Q ss_pred             eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961        169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD  206 (320)
Q Consensus       169 ~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd  206 (320)
                      +++.++.+|...|.+++|+|++..|++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            56788899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.85  E-value=4.6e-06  Score=81.68  Aligned_cols=266  Identities=10%  Similarity=0.164  Sum_probs=142.7

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ...|.++.|.++...++.+..+|.|-++..+..... ........-...|.+..|+||++.++....++++.+-+- +..
T Consensus        75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~-~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~-~fd  152 (928)
T PF04762_consen   75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDE-DEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTR-DFD  152 (928)
T ss_pred             CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCC-ceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEec-cce
Confidence            457889999999998999999999998833211111 111122234678999999999999999888888887642 222


Q ss_pred             eeeecccCccc-----eeEEEEeeC------CCCCEEEE--------EeCCCeEEEEeCCCCcEEEEeccCCccc-----
Q psy14961         99 LLQSFHGHTGE-----LMDLDLAPS------ETGNTFVS--------GSSDKLVNIWDMRTGYCVQSFEGHHNLI-----  154 (320)
Q Consensus        99 ~~~~~~~~~~~-----v~~~~~~~~------~~~~~l~s--------~~~dg~i~lwd~~~~~~~~~~~~~~~~~-----  154 (320)
                      ++.....+...     -..+.|...      +.|+..+-        --..+.+. ||  ++.+..++++....+     
T Consensus       153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~d--d~~~~ISWRGDG~yFAVss~  229 (928)
T PF04762_consen  153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WD--DGRVRISWRGDGEYFAVSSV  229 (928)
T ss_pred             EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cC--CCceEEEECCCCcEEEEEEE
Confidence            22211110000     000000000      00000000        00001111 11  111222222222111     


Q ss_pred             ---c-CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC---CCeEEEEECCCCeeEeEEecC--cceeee
Q psy14961        155 ---T-DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD---DATCRLFDLRADKEVACYKKD--SILFGA  225 (320)
Q Consensus       155 ---~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~--~~~~~~  225 (320)
                         . ....+++|+-+ |....+-+.-.+--.+++|.|.|+.+|+...   ...|.+|.-+. -.-..|...  .....+
T Consensus       230 ~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNG-LrhgeF~l~~~~~~~~v  307 (928)
T PF04762_consen  230 EPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNG-LRHGEFTLRFDPEEEKV  307 (928)
T ss_pred             EcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCC-cEeeeEecCCCCCCcee
Confidence               1 13456777643 4444333322333457999999999988764   34577776332 222222211  122346


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE--EEee-cCCCceeEEEECc-CCCeEEEecCCCceEeee
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV--NHLM-GHENRVSCLQVSP-DGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~--~~~~-~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~  292 (320)
                      ..+.|++|+..||.-..+. |.+|-+.+..-.  .++. .....+..+.|+| +...|...+.++.+...+
T Consensus       308 ~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~  377 (928)
T PF04762_consen  308 IELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYD  377 (928)
T ss_pred             eEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEE
Confidence            7899999999999987665 999987664321  2222 2234456699999 455577777766665444

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.84  E-value=3.9e-05  Score=64.09  Aligned_cols=226  Identities=16%  Similarity=0.146  Sum_probs=123.9

Q ss_pred             EEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee
Q psy14961         24 ACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        24 ~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  102 (320)
                      +..|++ ++.++++--..+.|..|+.....     ...+... . ...+.+...+..++.+..++ +.++|+.+++....
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~-----~~~~~~~-~-~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~   75 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGE-----VEVIDLP-G-PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVL   75 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTE-----EEEEESS-S-EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCe-----EEEEecC-C-CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEE
Confidence            457887 77777777778888888764211     1111111 2 44455553335667666655 45559888754332


Q ss_pred             ccc-----CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCC
Q psy14961        103 FHG-----HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH  177 (320)
Q Consensus       103 ~~~-----~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~  177 (320)
                      ...     .......+  ..+++|++.++........      .             ...+.+..++.. ++...... .
T Consensus        76 ~~~~~~~~~~~~~ND~--~vd~~G~ly~t~~~~~~~~------~-------------~~~g~v~~~~~~-~~~~~~~~-~  132 (246)
T PF08450_consen   76 ADLPDGGVPFNRPNDV--AVDPDGNLYVTDSGGGGAS------G-------------IDPGSVYRIDPD-GKVTVVAD-G  132 (246)
T ss_dssp             EEEETTCSCTEEEEEE--EE-TTS-EEEEEECCBCTT------C-------------GGSEEEEEEETT-SEEEEEEE-E
T ss_pred             eeccCCCcccCCCceE--EEcCCCCEEEEecCCCccc------c-------------ccccceEEECCC-CeEEEEec-C
Confidence            221     11223334  3455677555443321100      0             000223333332 22111111 1


Q ss_pred             CCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCee-E---eEE-ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        178 QSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKE-V---ACY-KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~-~---~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      -...+.|+|+|+++.|+ +-+..+.|..+++..... +   ..+ .........-.++++.+|.+.++....+.|..+|.
T Consensus       133 ~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p  212 (246)
T PF08450_consen  133 LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP  212 (246)
T ss_dssp             ESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred             cccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence            23468999999999775 667788899998863222 1   111 11111112456889999999888888999999997


Q ss_pred             CCCeEEEEeecCCCceeEEEEC-cCCCeEEE
Q psy14961        252 LKCCRVNHLMGHENRVSCLQVS-PDGTAFSS  281 (320)
Q Consensus       252 ~~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s  281 (320)
                      . ++.+..+.-....+++++|. ++.+.|..
T Consensus       213 ~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~v  242 (246)
T PF08450_consen  213 D-GKLLREIELPVPRPTNCAFGGPDGKTLYV  242 (246)
T ss_dssp             T-SCEEEEEE-SSSSEEEEEEESTTSSEEEE
T ss_pred             C-ccEEEEEcCCCCCEEEEEEECCCCCEEEE
Confidence            6 66666665445589999994 66555443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4190|consensus

Probab=98.82  E-value=1e-08  Score=90.09  Aligned_cols=206  Identities=17%  Similarity=0.220  Sum_probs=132.6

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-------cceeeecccCccceeEEEEeeCCCCCEEEEEeCCC
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-------SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK  131 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg  131 (320)
                      ..+.+|...|..+.-..+.+.+++++.|.+|++|.+..       ..+..++..|+.+|.++.+-.+  -..  .++.||
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~--lr~--i~ScD~  804 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD--LRS--IASCDG  804 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec--cce--eeeccC
Confidence            45567888888777666778899999999999998753       3466788999999999887543  233  446688


Q ss_pred             eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE-eeCCCeEEEEECCCC
Q psy14961        132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT-GSDDATCRLFDLRAD  210 (320)
Q Consensus       132 ~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s-~s~dg~i~iwd~~~~  210 (320)
                      .|++||.--++.+....              |+.+.        +-...|.|+.- -+...+++ |+...+++++|.+..
T Consensus       805 giHlWDPFigr~Laq~~--------------dapk~--------~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsc  861 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQME--------------DAPKE--------GAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSC  861 (1034)
T ss_pred             cceeecccccchhHhhh--------------cCccc--------CCCceeEeccc-Ccchheeeeccchhhheeeecccc
Confidence            99999976554432211              11111        01112222211 12334444 477889999999877


Q ss_pred             eeEeEEecCc---ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961        211 KEVACYKKDS---ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       211 ~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                      +-....+..+   ...-...+++.+.|+.++.|-.+|+|.+-|.+++..+....+-+-....++ .|..+.|+..-.|.+
T Consensus       862 e~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHs  940 (1034)
T KOG4190|consen  862 EWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHS  940 (1034)
T ss_pred             cceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccce
Confidence            5443332211   111245788889999999999999999999999887765554443344444 344455666656666


Q ss_pred             eEe-ee
Q psy14961        288 LRD-EE  292 (320)
Q Consensus       288 ir~-~~  292 (320)
                      +-+ |.
T Consensus       941 laVnWh  946 (1034)
T KOG4190|consen  941 LAVNWH  946 (1034)
T ss_pred             eEeeeh
Confidence            655 65

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.82  E-value=3.9e-06  Score=72.93  Aligned_cols=170  Identities=17%  Similarity=0.161  Sum_probs=117.5

Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC-eEEEEeCCCCcEEEEeccCCccc
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK-LVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      +|.+++..|+ |...|.+...+-.++.  ++.+.|.-..+...  ++-++.|..|| .+-++|..++...          
T Consensus       331 ~Gd~ia~VSR-GkaFi~~~~~~~~iqv--~~~~~VrY~r~~~~--~e~~vigt~dgD~l~iyd~~~~e~k----------  395 (668)
T COG4946         331 NGDYIALVSR-GKAFIMRPWDGYSIQV--GKKGGVRYRRIQVD--PEGDVIGTNDGDKLGIYDKDGGEVK----------  395 (668)
T ss_pred             CCcEEEEEec-CcEEEECCCCCeeEEc--CCCCceEEEEEccC--CcceEEeccCCceEEEEecCCceEE----------
Confidence            5667777664 6777777655544432  45666766665443  45788888888 7888887766432          


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                                        .+...-+.|.++..+|+|++++.+.....+.+.|+.++..... .+.. ..-++.+.|||++
T Consensus       396 ------------------r~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~i-dkS~-~~lItdf~~~~ns  455 (668)
T COG4946         396 ------------------RIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLI-DKSE-YGLITDFDWHPNS  455 (668)
T ss_pred             ------------------EeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEe-cccc-cceeEEEEEcCCc
Confidence                              1223345688999999999999999888999999998865432 2211 1125789999999


Q ss_pred             cEEEEEeCCC----eEEEEcCCCCeEEE--EeecCCCceeEEEECcCCCeEEEec
Q psy14961        235 RLLFAGYNDY----TINVWDSLKCCRVN--HLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       235 ~~l~~g~~dg----~v~~wd~~~~~~~~--~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      .++|-+..+|    .|+++|+..++...  +-.+|.   -+-+|.||+++|.--|
T Consensus       456 r~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~D---fsPaFD~d~ryLYfLs  507 (668)
T COG4946         456 RWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYD---FSPAFDPDGRYLYFLS  507 (668)
T ss_pred             eeEEEecCcceeeeeEEEEecCCCeEEEecCCcccc---cCcccCCCCcEEEEEe
Confidence            9999987665    69999998765442  233343   3568999999865544

>KOG1832|consensus

Probab=98.82  E-value=7.3e-09  Score=95.60  Aligned_cols=207  Identities=18%  Similarity=0.334  Sum_probs=143.1

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC-eEEE
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK-LVNI  135 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg-~i~l  135 (320)
                      ...+..|....+|+.|+.+.+.|+.|+-.|.|+++++.+|.......+|.+.+.-+  .|+.+|...++.+. .. ...+
T Consensus      1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~v--ePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLV--EPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccc--cccCCcceeeeeccccCchHHH
Confidence            34566788899999999999999999999999999999999999999999998754  56777876665443 33 5679


Q ss_pred             EeCCC-CcEEEEeccCCcc-----------ccCCCeEEEEECcCCeeeeee-cC---CCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        136 WDMRT-GYCVQSFEGHHNL-----------ITDDKLVNIWDMRTGYCVQSF-EG---HQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       136 wd~~~-~~~~~~~~~~~~~-----------~~~d~~i~iwd~~~~~~~~~~-~~---~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                      |++.+ +....+|.+...+           .+......+||+.++.++.+. .+   ..-.=+++.|+|+...++   .|
T Consensus      1172 W~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---nd 1248 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---ND 1248 (1516)
T ss_pred             hccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eC
Confidence            99854 3334444332211           133456789999998776652 22   122337899999877664   45


Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeE
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF  279 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l  279 (320)
                      |  .+||++..+.+..|......   ..-.|+|.|.-++.-+     .|||+++...+++...-.  =..+.|+..|..+
T Consensus      1249 G--vLWDvR~~~aIh~FD~ft~~---~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld--qc~VtFNstG~Vm 1316 (1516)
T KOG1832|consen 1249 G--VLWDVRIPEAIHRFDQFTDY---GGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD--QCAVTFNSTGDVM 1316 (1516)
T ss_pred             c--eeeeeccHHHHhhhhhheec---ccccccCCCceEEeec-----hhhhhHHHHHHhcCcccc--ceEEEeccCccch
Confidence            5  68999987666555443321   2345999999887755     489988765554432222  2568888888765


Q ss_pred             EE
Q psy14961        280 SS  281 (320)
Q Consensus       280 ~s  281 (320)
                      ..
T Consensus      1317 Ya 1318 (1516)
T KOG1832|consen 1317 YA 1318 (1516)
T ss_pred             hh
Confidence            53

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.82  E-value=1e-05  Score=66.12  Aligned_cols=226  Identities=13%  Similarity=0.055  Sum_probs=115.6

Q ss_pred             EEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961         25 CAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        25 ~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  103 (320)
                      ++.+++|++||.- .|..|.+-....+-.+...+..... ....=+.++|++++..|+.+...|+|++||+.... +..+
T Consensus         3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I   80 (282)
T PF15492_consen    3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVI   80 (282)
T ss_pred             eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEc
Confidence            4667899887776 4677777644211111111111111 12223568899999999999999999999987543 3333


Q ss_pred             ccCc-------cceeEEEEeeCCC----CCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECc-----C
Q psy14961        104 HGHT-------GELMDLDLAPSET----GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR-----T  167 (320)
Q Consensus       104 ~~~~-------~~v~~~~~~~~~~----~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~-----~  167 (320)
                      ....       ..|..+.|.....    ...|+.-.                           .+|.++-|-+.     .
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~---------------------------Y~G~L~Sy~vs~gt~q~  133 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN---------------------------YRGQLRSYLVSVGTNQG  133 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEe---------------------------ccceeeeEEEEcccCCc
Confidence            3211       1122222211100    00122222                           22222222211     0


Q ss_pred             Cee--eeeec-CCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCcceeeeEEEEE---ecCCcEEEEE
Q psy14961        168 GYC--VQSFE-GHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDSILFGATSVDF---SVSGRLLFAG  240 (320)
Q Consensus       168 ~~~--~~~~~-~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~l~~g  240 (320)
                      .+.  ...+. .+...|+++.++|..+.|+.|+. ...-..+...             ..+.++-.+   +|..+. ++.
T Consensus       134 y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~-------------~~GLtaWRiL~~~Pyyk~-v~~  199 (282)
T PF15492_consen  134 YQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKAS-------------SCGLTAWRILSDSPYYKQ-VTS  199 (282)
T ss_pred             ceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCcccccc-------------ccCceEEEEcCCCCcEEE-ccc
Confidence            111  12222 24678999999999888766653 3311111000             011222222   122222 222


Q ss_pred             eCCCe------EEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        241 YNDYT------INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       241 ~~dg~------v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++++.      -.+|.+.+...........+.|-.|..||||+.||+.+.+|.|-+|+.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~i  258 (282)
T PF15492_consen  200 SEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEI  258 (282)
T ss_pred             cCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEec
Confidence            22221      234443332222212334678999999999999999999999999997

>KOG3914|consensus

Probab=98.80  E-value=4e-08  Score=83.14  Aligned_cols=120  Identities=22%  Similarity=0.349  Sum_probs=84.9

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  103 (320)
                      ++.|..+...+..+-.-|.+.-+++-... + .....+.+|.++++.+.+++++++|+++.+|..|++-.......+..|
T Consensus       112 ai~~~~~~~sv~v~dkagD~~~~di~s~~-~-~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesf  189 (390)
T KOG3914|consen  112 AISFIREDTSVLVADKAGDVYSFDILSAD-S-GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESF  189 (390)
T ss_pred             eeeeeeccceEEEEeecCCceeeeeeccc-c-cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhh
Confidence            45555554444444333444333332111 1 334456799999999999999999999999999998776544444443


Q ss_pred             -ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961        104 -HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus       104 -~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                       .+|+.-|..+++.+   +..|+|+|.|+++++||+++|+++.+++
T Consensus       190 clGH~eFVS~isl~~---~~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  190 CLGHKEFVSTISLTD---NYLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             ccccHhheeeeeecc---CceeeecCCCCcEEEEecccCCcccccc
Confidence             46999998888754   4678999999999999999998876553

>KOG4532|consensus

Probab=98.80  E-value=2.8e-06  Score=68.68  Aligned_cols=227  Identities=15%  Similarity=0.103  Sum_probs=133.6

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEE-ecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCI-FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG  108 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  108 (320)
                      +--+|+.||..|...+|.....+.   .......|...|.-.. +-.....+..++.|.++++.+++.+..-...  |..
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~---h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~--h~~  157 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDG---HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAV--HNQ  157 (344)
T ss_pred             cccEEEeccccceeeeecccCccc---ceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccccee--ecc
Confidence            345889999999999997753221   1112222333222211 1111234777889999999998755433332  333


Q ss_pred             ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        109 ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       109 ~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      .+..-..+.++++.+.++.+....|-+|.+....-              ..++++.          ..-.+.-.+.+|+.
T Consensus       158 ~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~se--------------y~~~~~~----------a~t~D~gF~~S~s~  213 (344)
T KOG4532|consen  158 NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESE--------------YIENIYE----------APTSDHGFYNSFSE  213 (344)
T ss_pred             ccceeeeEEcCCCceEEEecCCCcceEEEeCCccc--------------eeeeeEe----------cccCCCceeeeecc
Confidence            32222334466788999999888888887643210              0111111          11122236789999


Q ss_pred             CCCEEEEeeCCCeEEEEECCCCeeEeEE---ecCcceeeeEEEEEecCCc--EEEEEeCCCeEEEEcCCCCeEEEEee--
Q psy14961        189 SGDAVATGSDDATCRLFDLRADKEVACY---KKDSILFGATSVDFSVSGR--LLFAGYNDYTINVWDSLKCCRVNHLM--  261 (320)
Q Consensus       189 ~g~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~--~l~~g~~dg~v~~wd~~~~~~~~~~~--  261 (320)
                      ....+|++..||++.|||++........   .++.....+..+.|+|-|.  +|...-.-+.+.+-|+++........  
T Consensus       214 ~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~  293 (344)
T KOG4532|consen  214 NDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIP  293 (344)
T ss_pred             CcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecC
Confidence            9899999999999999999865432211   1111223467899998765  45555455678899988764432221  


Q ss_pred             -----cCC-CceeEEEECcCCCeEEEecCC
Q psy14961        262 -----GHE-NRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       262 -----~h~-~~i~~i~~s~~~~~l~s~s~D  285 (320)
                           .|. .-|..-.|+.++.-..+++.+
T Consensus       294 ~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~  323 (344)
T KOG4532|consen  294 DDVERKHNTQHIFGTNFNNENESNDVKNEL  323 (344)
T ss_pred             ccccccccccccccccccCCCcccccccch
Confidence                 232 337777788776665555543

>KOG0309|consensus

Probab=98.79  E-value=4.9e-08  Score=88.58  Aligned_cols=227  Identities=19%  Similarity=0.254  Sum_probs=147.9

Q ss_pred             cCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeeecccCc--cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         66 SFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQSFHGHT--GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      ..+..+...+.+.-++.+++-|-.. -|+.. ..+-..+. |.  =.|..+.+.+.+.-.+-+.....-.-.+|++... 
T Consensus        25 ~~~~a~si~p~grdi~lAsr~gl~i-~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s-  101 (1081)
T KOG0309|consen   25 GGFNAVSINPSGRDIVLASRQGLYI-IDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS-  101 (1081)
T ss_pred             CcccceeeccccchhhhhhhcCeEE-EeccCCCCCceeee-ccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC-
Confidence            4455566677787888888776443 45543 22222221 21  1233445555543334444333344457776432 


Q ss_pred             EEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEe-EEecCc
Q psy14961        143 CVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVA-CYKKDS  220 (320)
Q Consensus       143 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~  220 (320)
                                   .+..|          ...+.+|...|+.+-|+|.. ..+++++.|-.+..||+++..... .+... 
T Consensus       102 -------------s~~aI----------ef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w-  157 (1081)
T KOG0309|consen  102 -------------SSNAI----------EFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSW-  157 (1081)
T ss_pred             -------------Cccce----------EEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecc-
Confidence                         12222          23356799999999999865 578999999999999998754322 11111 


Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecchHhh
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~~~  298 (320)
                       ....+.++|+.-..-+.+.+....|++||... ..++-++++|...|+.++|+. .-..+.+++.|+++++|+..+...
T Consensus       158 -~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~  236 (1081)
T KOG0309|consen  158 -RSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT  236 (1081)
T ss_pred             -cccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence             12356788987666666777788899999765 467788899999999999986 344688999999999999644432


Q ss_pred             h---------------h--eeeeeeecCCcceEEEeecC
Q psy14961        299 Q---------------Y--LLRSRITKPTQGLTVYFQDR  320 (320)
Q Consensus       299 ~---------------~--~~~~~~~~~~~~~~~~~~~~  320 (320)
                      .               |  |-+....+|..|.-++-|.|
T Consensus       237 e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~  275 (1081)
T KOG0309|consen  237 ESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLR  275 (1081)
T ss_pred             ccceeccccCcceeccccccCceeEeccccCCeeeeecc
Confidence            1               1  34478889999988777653

>KOG1275|consensus

Probab=98.75  E-value=2.4e-07  Score=86.03  Aligned_cols=192  Identities=20%  Similarity=0.347  Sum_probs=127.5

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      ++..++.|+-...+-.+|+....+    .+...-..+.|.-+.  .++..+.+|...|+|.+-|+++.+.+..+.+|.+.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e----~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~s  219 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKE----TRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGS  219 (1118)
T ss_pred             CCcceeecchhhheeeeeccccee----eeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccc
Confidence            444566666666677777643211    111111122344333  35678999999999999999999999999999999


Q ss_pred             eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC
Q psy14961        110 LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS  189 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~  189 (320)
                      +..+.+    .|++|++++..+.  .+++                .-|..|++||+|..+.+.-+.-+..+ .=+.|+|.
T Consensus       220 iSDfDv----~GNlLitCG~S~R--~~~l----------------~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Ps  276 (1118)
T KOG1275|consen  220 ISDFDV----QGNLLITCGYSMR--RYNL----------------AMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPS  276 (1118)
T ss_pred             eeeeec----cCCeEEEeecccc--cccc----------------cccchhhhhhhhhhhccCCcccccCc-hhhhhccc
Confidence            977655    3789999876432  2221                23667788888876665555444443 34778886


Q ss_pred             -CCEEEEeeCCCeEEEEECCC-Cee-EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        190 -GDAVATGSDDATCRLFDLRA-DKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       190 -g~~l~s~s~dg~i~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                       ...++.++..|...+.|..+ +.+ ...+........+..+++|++|..||.|..+|.|.+|.
T Consensus       277 l~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  277 LTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             ccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence             35688888999999998322 111 11111122222367899999999999999999999996

>KOG2695|consensus

Probab=98.75  E-value=7.8e-08  Score=80.00  Aligned_cols=167  Identities=21%  Similarity=0.291  Sum_probs=113.6

Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      ++.+.+-.|-+-|++++.- +.|. .++.|..+.|+.+  ++++..|+.+|.|-..|++.+.     ++           
T Consensus       228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s--~nLv~~GcRngeI~~iDLR~rn-----qG-----------  287 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGS--DNLVFNGCRNGEIFVIDLRCRN-----QG-----------  287 (425)
T ss_pred             ecccccceeEEEEeecccc-cccc-cchhHHHHHhccc--CCeeEecccCCcEEEEEeeecc-----cC-----------
Confidence            4455566777778777642 2333 5677777777543  5789999999999999987641     00           


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCee---EeEEecCcceeeeEEEEEecCCcE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKE---VACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                            ++.+.+.+ .|...|+++..-. ++.+|++.+.+|+|++||++.-+.   +..++.+.....-.-+-+.+....
T Consensus       288 ------~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~  360 (425)
T KOG2695|consen  288 ------NGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGS  360 (425)
T ss_pred             ------CCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccce
Confidence                  11122222 3888898888877 678899999999999999986544   667766543322223445677778


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeec----CCCceeEEEECc
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMG----HENRVSCLQVSP  274 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~----h~~~i~~i~~s~  274 (320)
                      +++++.|...+||.+..+..+.++.-    .+..+.+++|..
T Consensus       361 I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  361 IFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFDS  402 (425)
T ss_pred             EEEccCeeEEEEEecccCceeeccCCCCccccccccceehhc
Confidence            88899999999999988877766532    233456666654

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.75  E-value=2.2e-05  Score=65.04  Aligned_cols=203  Identities=19%  Similarity=0.113  Sum_probs=126.8

Q ss_pred             CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc-------------
Q psy14961         86 DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN-------------  152 (320)
Q Consensus        86 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~-------------  152 (320)
                      +|+|..||+.+++.+....... ........+..++..+++++.++.|..||..+|+.+..++....             
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~   80 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGP-GIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVY   80 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSS-SCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEE
T ss_pred             CCEEEEEECCCCCEEEEEECCC-CCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccc
Confidence            6899999999999887765311 11111111121356888889999999999999987766543211             


Q ss_pred             cccCCCeEEEEECcCCeeeeee-cCCC---CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee-----
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSF-EGHQ---SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF-----  223 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~-~~~~---~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-----  223 (320)
                      +...++.+..+|.++++..... ....   ...........++.++.+..++.+..+|+.+++.+-.++......     
T Consensus        81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~  160 (238)
T PF13360_consen   81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS  160 (238)
T ss_dssp             EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE
T ss_pred             cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee
Confidence            1134678899999999887763 3221   111222333337888888889999999999998876655432110     


Q ss_pred             ---ee-EEEEEecCCcEEEEEeCCCe-EEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        224 ---GA-TSVDFSVSGRLLFAGYNDYT-INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       224 ---~~-~~~~~s~~~~~l~~g~~dg~-v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                         .. ..+.+. ++ .++.+..++. +.+ |..+++.+-+..  ...+..+ ..+++..|+.++.|+.+..+|.++
T Consensus       161 ~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~t  231 (238)
T PF13360_consen  161 SFSDINGSPVIS-DG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKT  231 (238)
T ss_dssp             EETTEEEEEECC-TT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEETTTEEEEEETTT
T ss_pred             eecccccceEEE-CC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccCC-ceeeCCEEEEEeCCCEEEEEECCC
Confidence               01 122222 44 6666666774 566 999887653222  2333332 345667777777999999999654

...

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.72  E-value=2.4e-05  Score=70.34  Aligned_cols=181  Identities=10%  Similarity=0.038  Sum_probs=103.7

Q ss_pred             CeEEEEecCCCCE-EEEEeC---CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE-eCC--CeEEEEeCC
Q psy14961         67 FISCCIFPNSDQQ-ILTGSG---DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG-SSD--KLVNIWDMR  139 (320)
Q Consensus        67 ~v~~~~~~~~~~~-l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~d--g~i~lwd~~  139 (320)
                      ....-.|+++++. ++..+.   +..|.++|+.+++...... ..+......|  +|||+.++.. +.+  ..|.++|+.
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~--SPDG~~la~~~~~~g~~~Iy~~dl~  265 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDV--SKDGSKLLLTMAPKGQPDIYLYDTN  265 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEE--CCCCCEEEEEEccCCCcEEEEEECC
Confidence            5667889999984 554333   3568888998876544322 2333333444  5678766643 322  234444544


Q ss_pred             CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCC--eEEEEECCCCeeEeEE
Q psy14961        140 TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDA--TCRLFDLRADKEVACY  216 (320)
Q Consensus       140 ~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg--~i~iwd~~~~~~~~~~  216 (320)
                      ++.                           .. .+..+........|+|||+.++-.+ ..+  .|.+.|+.+++.....
T Consensus       266 ~g~---------------------------~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt  317 (419)
T PRK04043        266 TKT---------------------------LT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVV  317 (419)
T ss_pred             CCc---------------------------EE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCc
Confidence            332                           11 1111221123457999999876655 333  5777788776553322


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCC---------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYND---------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~d---------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      ... .    ....|||||+.|+.....         ..|.+.|+..+.. ..+... .......|+|||++++-.+.+
T Consensus       318 ~~g-~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~  388 (419)
T PRK04043        318 FHG-K----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYL  388 (419)
T ss_pred             cCC-C----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEcc
Confidence            111 1    124799999988776643         3677778766543 223322 233468999999987666543

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.70  E-value=0.00012  Score=61.77  Aligned_cols=230  Identities=13%  Similarity=0.143  Sum_probs=133.9

Q ss_pred             EEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccC----------eEEEEecCCCCEEEEEeC-CCeEE
Q psy14961         23 MACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSF----------ISCCIFPNSDQQILTGSG-DCTCA   90 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~~~-dg~v~   90 (320)
                      .-++++++|++|+++.. .|.|.++.+...+. .........|.+.          +-+..+.|+++++++.+- --.|.
T Consensus        92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~-l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~  170 (346)
T COG2706          92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGS-LQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIF  170 (346)
T ss_pred             eEEEECCCCCEEEEEEccCceEEEEEcccCCc-cccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEE
Confidence            56789999999999875 47899998743221 1111122223332          567788999999887753 24799


Q ss_pred             EEECCCcceeeecc---cCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCC-cEEEEeccCCccccCCCeEEEEEC
Q psy14961         91 LWDVESSQLLQSFH---GHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTG-YCVQSFEGHHNLITDDKLVNIWDM  165 (320)
Q Consensus        91 iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~-~~~~~~~~~~~~~~~d~~i~iwd~  165 (320)
                      +|+++.+++...-.   .....-+=+.|+|  ++++.+..++ +++|.+|..... ..+..++.+...-           
T Consensus       171 ~y~~~dg~L~~~~~~~v~~G~GPRHi~FHp--n~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP-----------  237 (346)
T COG2706         171 LYDLDDGKLTPADPAEVKPGAGPRHIVFHP--NGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLP-----------  237 (346)
T ss_pred             EEEcccCccccccccccCCCCCcceEEEcC--CCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCc-----------
Confidence            99998776532211   1222333466655  6888776654 788999987653 2222222111000           


Q ss_pred             cCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCee-EeEEec-CcceeeeEEEEEecCCcEEEEEeC
Q psy14961        166 RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKE-VACYKK-DSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       166 ~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~-~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                            ..+. -......|..+|+|++|+++.+ ...|.++.+..... +..... ...........|+|.|++|+++.+
T Consensus       238 ------~dF~-g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q  310 (346)
T COG2706         238 ------EDFT-GTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQ  310 (346)
T ss_pred             ------cccC-CCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEcc
Confidence                  0011 1234667899999999988765 34677887654322 222211 111223577889999999988875


Q ss_pred             C-CeEEEEcCC--CCeEEEEee-cCCCceeEEEEC
Q psy14961        243 D-YTINVWDSL--KCCRVNHLM-GHENRVSCLQVS  273 (320)
Q Consensus       243 d-g~v~~wd~~--~~~~~~~~~-~h~~~i~~i~~s  273 (320)
                      + ..|.+|...  +++.-.... .+.....||.|.
T Consensus       311 ~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         311 KSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             CCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence            4 468888543  333221111 233345577664

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.67  E-value=6.1e-05  Score=67.79  Aligned_cols=189  Identities=12%  Similarity=0.087  Sum_probs=103.6

Q ss_pred             ceEEEEEcCCCCE-EEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE-EeCC--CeEEEEE
Q psy14961         21 WVMACAYAPSGSV-VASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT-GSGD--CTCALWD   93 (320)
Q Consensus        21 ~V~~~~~~~~~~~-l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~d--g~v~iwd   93 (320)
                      ......|+|||+. ++..+.+   ..|.++|+...  ..   ..+....+......|+++++.++. .+.+  ..|.++|
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg--~~---~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d  263 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG--KK---EKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYD  263 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCC--cE---EEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEE
Confidence            5667889999984 6654444   34555555321  11   122223445566779999987654 3334  4677778


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-C--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-K--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      +.++...+ +..+........|  +|||+.|+-.+.. +  .|.+.|+.++                           +.
T Consensus       264 l~~g~~~~-LT~~~~~d~~p~~--SPDG~~I~F~Sdr~g~~~Iy~~dl~~g---------------------------~~  313 (419)
T PRK04043        264 TNTKTLTQ-ITNYPGIDVNGNF--VEDDKRIVFVSDRLGYPNIFMKKLNSG---------------------------SV  313 (419)
T ss_pred             CCCCcEEE-cccCCCccCccEE--CCCCCEEEEEECCCCCceEEEEECCCC---------------------------Ce
Confidence            87776433 3222221122334  5678877765532 2  2334444333                           22


Q ss_pred             eee-ecCCCCCeEEEEEcCCCCEEEEeeCC---------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        171 VQS-FEGHQSDVNSVKFHPSGDAVATGSDD---------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       171 ~~~-~~~~~~~v~~v~~~p~g~~l~s~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                      .+. ..+.  .  ...|+|+|+.++..+..         ..|.+.|+.+++.... ....   ......|+|||+.|+..
T Consensus       314 ~rlt~~g~--~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~L-T~~~---~~~~p~~SPDG~~I~f~  385 (419)
T PRK04043        314 EQVVFHGK--N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRL-TANG---VNQFPRFSSDGGSIMFI  385 (419)
T ss_pred             EeCccCCC--c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEEC-CCCC---CcCCeEECCCCCEEEEE
Confidence            111 1111  1  24899999988766543         3678888877754322 2221   12347799999988776


Q ss_pred             eCC-C--eEEEEcCC
Q psy14961        241 YND-Y--TINVWDSL  252 (320)
Q Consensus       241 ~~d-g--~v~~wd~~  252 (320)
                      ... +  .+.+.++.
T Consensus       386 ~~~~~~~~L~~~~l~  400 (419)
T PRK04043        386 KYLGNQSALGIIRLN  400 (419)
T ss_pred             EccCCcEEEEEEecC
Confidence            543 2  34445544

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.65  E-value=1.6e-05  Score=64.99  Aligned_cols=192  Identities=12%  Similarity=0.121  Sum_probs=105.6

Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEecccCCccc-cccccc-ccccCeEEEEecCC------CCEEEEEeCCCeEEEEEC
Q psy14961         23 MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA-KKKTVA-THTSFISCCIFPNS------DQQILTGSGDCTCALWDV   94 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~-~~~~~~-~h~~~v~~~~~~~~------~~~l~s~~~dg~v~iwd~   94 (320)
                      ..++||||+.+||.+...|+|++||+-....-.. ...... .-...|..+.|.+.      ...|++-..+|.++=|-+
T Consensus        47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~v  126 (282)
T PF15492_consen   47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLV  126 (282)
T ss_pred             eEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEE
Confidence            5689999999999999999999999852111000 000011 11244555555321      124666667777776654


Q ss_pred             C--Cc---ceeeec--c-cCccceeEEEEeeCCCCCEEEEEeCCC-----------eEEEEeCCCCcEEEEe-ccCCccc
Q psy14961         95 E--SS---QLLQSF--H-GHTGELMDLDLAPSETGNTFVSGSSDK-----------LVNIWDMRTGYCVQSF-EGHHNLI  154 (320)
Q Consensus        95 ~--~~---~~~~~~--~-~~~~~v~~~~~~~~~~~~~l~s~~~dg-----------~i~lwd~~~~~~~~~~-~~~~~~~  154 (320)
                      .  +.   +....+  . .+...|.++.++|.  .++|+.|+...           -+-.|.+-++...... ......+
T Consensus       127 s~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~--h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~  204 (282)
T PF15492_consen  127 SVGTNQGYQENHSFSFSSHYPHGINSAVYHPK--HRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDI  204 (282)
T ss_pred             EcccCCcceeeEEEEecccCCCceeEEEEcCC--CCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccc
Confidence            2  21   222222  1 23556777777654  45666665321           2445555444322211 0111111


Q ss_pred             c-CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        155 T-DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       155 ~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                      . ...+-.+|.+-+.............|..|..||||..||+..-+|.|.+|++..-+....+
T Consensus       205 ~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W  267 (282)
T PF15492_consen  205 TASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW  267 (282)
T ss_pred             cccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence            1 1112233333322221111234567999999999999999999999999999876655444

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.64  E-value=2.5e-05  Score=77.98  Aligned_cols=224  Identities=14%  Similarity=0.120  Sum_probs=124.3

Q ss_pred             EEEEEcCCCCEEEEec-CCCeEEEEEecccCCccc-----ccccccc------c-ccCeEEEEecCC-CCEEEEEeCCCe
Q psy14961         23 MACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSA-----KKKTVAT------H-TSFISCCIFPNS-DQQILTGSGDCT   88 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~-----~~~~~~~------h-~~~v~~~~~~~~-~~~l~s~~~dg~   88 (320)
                      ..++++++++.|..+. ..+.|+++|+....-...     ......+      + -..-..+.+.++ +..+++.+.++.
T Consensus       627 ~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~  706 (1057)
T PLN02919        627 QGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQ  706 (1057)
T ss_pred             cEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCe
Confidence            6788998887655543 456788887632110000     0000000      0 011235777774 445556667889


Q ss_pred             EEEEECCCcceeeeccc---------C------ccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961         89 CALWDVESSQLLQSFHG---------H------TGELMDLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        89 v~iwd~~~~~~~~~~~~---------~------~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      |++||..++... .+.+         +      -.....+++  +++++.| ++-+.++.|++||+.++.......+.. 
T Consensus       707 I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIav--spdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~-  782 (1057)
T PLN02919        707 IWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISL--SPDLKELYIADSESSSIRALDLKTGGSRLLAGGDP-  782 (1057)
T ss_pred             EEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEE--eCCCCEEEEEECCCCeEEEEECCCCcEEEEEeccc-
Confidence            999998776432 1111         0      011233545  4567644 455667899999998765321111100 


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-----------cc
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-----------SI  221 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------~~  221 (320)
                       ...+....+.+. .+.....   .-..-..++++|+|+.+++-+.++.|++||..++.........           ..
T Consensus       783 -~~~~~l~~fG~~-dG~g~~~---~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~  857 (1057)
T PLN02919        783 -TFSDNLFKFGDH-DGVGSEV---LLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQ  857 (1057)
T ss_pred             -ccCcccccccCC-CCchhhh---hccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccc
Confidence             000011111110 0000000   0111347899999998899999999999999876544322110           01


Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      ...+..++++++|+++++-+.++.|++||+.++.
T Consensus       858 l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~  891 (1057)
T PLN02919        858 LSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE  891 (1057)
T ss_pred             cCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence            1135678999999988888899999999987754

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.63  E-value=5.6e-05  Score=67.80  Aligned_cols=246  Identities=13%  Similarity=0.017  Sum_probs=139.6

Q ss_pred             CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEE-EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISC-CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      +..++.++.++.+..+|....+.....    ... ..+.+ ...  .+..++.+..++.+..+|.++++.+..+......
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~----~~~-~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~  192 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQT----KVA-GEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPS  192 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccc----cCC-CceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCc
Confidence            345667778888888886543322211    111 11111 111  2456777888999999999999988766532111


Q ss_pred             eeE-EEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---------------Cc---------cccCCCeEEEEE
Q psy14961        110 LMD-LDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---------------HN---------LITDDKLVNIWD  164 (320)
Q Consensus       110 v~~-~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---------------~~---------~~~~d~~i~iwd  164 (320)
                      ... ....|.-.+..++.++.++.+...|..+|+.+...+..               ..         ....++.+..+|
T Consensus       193 ~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald  272 (394)
T PRK11138        193 LTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALD  272 (394)
T ss_pred             ccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEE
Confidence            000 00011111346777888899998898887654332100               00         112456677778


Q ss_pred             CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC
Q psy14961        165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY  244 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg  244 (320)
                      ..+++.+-...-  .....+..  .+..++.++.+|.+..+|..+++.+-........ ...+..+  .+..|+.++.+|
T Consensus       273 ~~tG~~~W~~~~--~~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~-~~~sp~v--~~g~l~v~~~~G  345 (394)
T PRK11138        273 LRSGQIVWKREY--GSVNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHR-LLTAPVL--YNGYLVVGDSEG  345 (394)
T ss_pred             CCCCCEEEeecC--CCccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCC-cccCCEE--ECCEEEEEeCCC
Confidence            877765543321  11111222  3567888889999999999888764322211000 0111111  256788889999


Q ss_pred             eEEEEcCCCCeEEEEeecCCCcee-EEEECcCCCeEEEecCCCceEeee
Q psy14961        245 TINVWDSLKCCRVNHLMGHENRVS-CLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       245 ~v~~wd~~~~~~~~~~~~h~~~i~-~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+...|..+++.+.+..-....+. ...+  .+..|+.++.||.+...+
T Consensus       346 ~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~  392 (394)
T PRK11138        346 YLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAIT  392 (394)
T ss_pred             EEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEe
Confidence            999999988887765543322222 2222  234677789999876543

>KOG0882|consensus

Probab=98.63  E-value=3.2e-07  Score=78.96  Aligned_cols=236  Identities=15%  Similarity=0.127  Sum_probs=149.6

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CCeEEEEECC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DCTCALWDVE   95 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~   95 (320)
                      +|...|+-+ |....+++.+|+.||.++.|.-..- ....-...+..|.+.+.++..+-++-.+.+.+. |..++++|++
T Consensus         7 mhrd~i~hv-~~tka~fiiqASlDGh~KFWkKs~i-sGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE   84 (558)
T KOG0882|consen    7 MHRDVITHV-FPTKAKFIIQASLDGHKKFWKKSRI-SGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVE   84 (558)
T ss_pred             cccceeeeE-eeehhheEEeeecchhhhhcCCCCc-cceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEee
Confidence            566666666 5566779999999999999964320 011223345677888888888878877778777 9999999998


Q ss_pred             Ccceeeeccc--CccceeEEEEeeCCCCC---EE-EEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         96 SSQLLQSFHG--HTGELMDLDLAPSETGN---TF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        96 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~---~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      +-.....++.  ..+.+   .+.-+ .|.   .+ ++.-.++.+.++|-....|.                         
T Consensus        85 n~DminmiKL~~lPg~a---~wv~s-kGd~~s~IAVs~~~sg~i~VvD~~~d~~q-------------------------  135 (558)
T KOG0882|consen   85 NFDMINMIKLVDLPGFA---EWVTS-KGDKISLIAVSLFKSGKIFVVDGFGDFCQ-------------------------  135 (558)
T ss_pred             ccchhhhcccccCCCce---EEecC-CCCeeeeEEeecccCCCcEEECCcCCcCc-------------------------
Confidence            7544322221  11211   22111 121   22 23334566777765443211                         


Q ss_pred             eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC------CeeEeEEecCcce-------eeeEEEEEecCCcE
Q psy14961        170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA------DKEVACYKKDSIL-------FGATSVDFSVSGRL  236 (320)
Q Consensus       170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~------~~~~~~~~~~~~~-------~~~~~~~~s~~~~~  236 (320)
                      ....-+-|..+|.++.+.|.++.++|....|.|.-|....      .+....++.+...       ....++.|+|+|..
T Consensus       136 ~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~q  215 (558)
T KOG0882|consen  136 DGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQ  215 (558)
T ss_pred             cceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCc
Confidence            1122234889999999999999999999999999998763      1111111111111       12568999999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEE--------------------------------eecCCC-ceeEEEECcCCCeEEEec
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNH--------------------------------LMGHEN-RVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~--------------------------------~~~h~~-~i~~i~~s~~~~~l~s~s  283 (320)
                      +.+-..|..|++++..++..+..                                +..|.. .-..+.|...|++|+=|+
T Consensus       216 istl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t  295 (558)
T KOG0882|consen  216 ISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGT  295 (558)
T ss_pred             ccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeec
Confidence            99999999999997655432211                                123333 346788888888887776

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.59  E-value=3.2e-05  Score=67.88  Aligned_cols=265  Identities=14%  Similarity=0.167  Sum_probs=148.5

Q ss_pred             CeEeecccceeEEEEEeCccc--eE-EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATW--VM-ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~--V~-~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      +.+||+..+.....+......  .+ -+.|+-+++++|-. ...++.|+++. ..........+.  ...+....++|.+
T Consensus       110 ~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~t-~n~~~~p~~~lr--~~gi~dFsisP~~  185 (561)
T COG5354         110 VFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEIT-DNIEEHPFKNLR--PVGILDFSISPEG  185 (561)
T ss_pred             eeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEecC-CccccCchhhcc--ccceeeEEecCCC
Confidence            469999999888877655444  44 67899988887765 34579999862 221111112221  1223334444432


Q ss_pred             --CEEE-----EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEe-----------CCCeEEEEeCC
Q psy14961         78 --QQIL-----TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-----------SDKLVNIWDMR  139 (320)
Q Consensus        78 --~~l~-----s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-----------~dg~i~lwd~~  139 (320)
                        ..|+     ..+.++.+++|.+..+..+..-.-.  .+..+.+...+.|++++.--           .+..+.|+++.
T Consensus       186 n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf--k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~  263 (561)
T COG5354         186 NHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF--KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT  263 (561)
T ss_pred             CCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE--eecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence              2222     2466889999998766554332111  12222233233455443211           12346666665


Q ss_pred             CCcEEE-----------EeccCCc---ccc--CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC---C
Q psy14961        140 TGYCVQ-----------SFEGHHN---LIT--DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD---A  200 (320)
Q Consensus       140 ~~~~~~-----------~~~~~~~---~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g  200 (320)
                      ...+..           +++++..   ++.  -+..+.++|++.. ....+  ....=+.+-|+|.+++++.++-|   |
T Consensus       264 e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~--Pe~~rNT~~fsp~~r~il~agF~nl~g  340 (561)
T COG5354         264 ERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF--PEQKRNTIFFSPHERYILFAGFDNLQG  340 (561)
T ss_pred             ccccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEec--CCcccccccccCcccEEEEecCCcccc
Confidence            322111           1211111   111  2445667777654 22222  33344678999999998887654   6


Q ss_pred             eEEEEECCCCeeEe-EEecCcceeeeEEEEEecCCcEEEEEe------CCCeEEEEcCCCCeEEEEeecCCCceeEEEEC
Q psy14961        201 TCRLFDLRADKEVA-CYKKDSILFGATSVDFSVSGRLLFAGY------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVS  273 (320)
Q Consensus       201 ~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s  273 (320)
                      .+.+||........ .+...    ..+-+.|+||++++.+..      .|..|+|||.... ...       ..+.+.|-
T Consensus       341 ni~i~~~~~rf~~~~~~~~~----n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~-~~f-------el~~~~W~  408 (561)
T COG5354         341 NIEIFDPAGRFKVAGAFNGL----NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA-KVF-------ELTNITWD  408 (561)
T ss_pred             ceEEeccCCceEEEEEeecC----CceEeeccCCceEEEecCCCcccccCcceEEEEecCc-hhh-------hhhhcccc
Confidence            79999987654432 22222    235678999999998875      3778999996532 111       45667777


Q ss_pred             cCCCeEEEecCCC
Q psy14961        274 PDGTAFSSGSWDT  286 (320)
Q Consensus       274 ~~~~~l~s~s~D~  286 (320)
                      |.|++..+.|.+.
T Consensus       409 p~~~~~ttsSs~~  421 (561)
T COG5354         409 PSGQYVTTSSSCP  421 (561)
T ss_pred             CCcccceeeccCC
Confidence            7777655555444

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.58  E-value=0.00011  Score=64.28  Aligned_cols=116  Identities=11%  Similarity=0.110  Sum_probs=86.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCC-eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDA-TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      |...|.-..+.-+++.++.|..|| .+-++|.++++... +...  ...+.++..+|+|++++++.....+-+.|+.++.
T Consensus       358 ~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr-~e~~--lg~I~av~vs~dGK~~vvaNdr~el~vididngn  434 (668)
T COG4946         358 KKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKR-IEKD--LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN  434 (668)
T ss_pred             CCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEE-eeCC--ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence            555677777777777889999999 89999999876432 2222  2235688999999999999999999999988876


Q ss_pred             EEEEeecCCCceeEEEECcCCCeEEEecCC----CceEeeecch
Q psy14961        256 RVNHLMGHENRVSCLQVSPDGTAFSSGSWD----TTLRDEESKN  295 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~~~~~  295 (320)
                      ..-.-....+-|+.++|||++++||=|=-+    +.|+++++.+
T Consensus       435 v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~  478 (668)
T COG4946         435 VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG  478 (668)
T ss_pred             eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC
Confidence            653333456789999999999999877543    4477776543

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.54  E-value=0.00013  Score=60.45  Aligned_cols=223  Identities=17%  Similarity=0.075  Sum_probs=126.6

Q ss_pred             eEeecccceeEEEEEeCc--cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          2 IIWDGLTQTKEHSVTMPA--TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~--~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      ..||..+++..-+....+  .... +...+++..+++++.++.+..||..........  .+.......  .  ...+..
T Consensus         6 ~~~d~~tG~~~W~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~--~~~~~~~~~--~--~~~~~~   78 (238)
T PF13360_consen    6 SALDPRTGKELWSYDLGPGIGGPV-ATAVPDGGRVYVASGDGNLYALDAKTGKVLWRF--DLPGPISGA--P--VVDGGR   78 (238)
T ss_dssp             EEEETTTTEEEEEEECSSSCSSEE-ETEEEETTEEEEEETTSEEEEEETTTSEEEEEE--ECSSCGGSG--E--EEETTE
T ss_pred             EEEECCCCCEEEEEECCCCCCCcc-ceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEe--eccccccce--e--eecccc
Confidence            467888888776665422  1111 113345667777788999999987432211111  111111111  1  123557


Q ss_pred             EEEEeCCCeEEEEECCCcceeeec-ccCcc--ce-eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSF-HGHTG--EL-MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT  155 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~--~v-~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~  155 (320)
                      ++.+..++.+..+|..+++.+... .....  .. .......  .++.++.+..++.|..+|+.+|+.+.......... 
T Consensus        79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~-  155 (238)
T PF13360_consen   79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAV--DGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRG-  155 (238)
T ss_dssp             EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEE--ETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-S-
T ss_pred             cccccceeeeEecccCCcceeeeeccccccccccccccCceE--ecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCC-
Confidence            777788899999999999988773 32211  11 1111222  26788999889999999999998766554321100 


Q ss_pred             CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCe-EEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT-CRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                         .         ....    ....+..-....++ .++.++.++. +.+ |+.+++.+-.. ....   ... ...+++
T Consensus       156 ---~---------~~~~----~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~-~~~~---~~~-~~~~~~  212 (238)
T PF13360_consen  156 ---S---------SPIS----SFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSK-PISG---IYS-LPSVDG  212 (238)
T ss_dssp             ---S-----------EE----EETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEE-CSS----ECE-CEECCC
T ss_pred             ---C---------ccee----eecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEe-cCCC---ccC-CceeeC
Confidence               0         0000    00112222222244 6666776775 555 99998865221 1111   111 145678


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      ..|++++.++.+..||..+++.+
T Consensus       213 ~~l~~~~~~~~l~~~d~~tG~~~  235 (238)
T PF13360_consen  213 GTLYVTSSDGRLYALDLKTGKVV  235 (238)
T ss_dssp             TEEEEEETTTEEEEEETTTTEEE
T ss_pred             CEEEEEeCCCEEEEEECCCCCEE
Confidence            88888889999999999988654

...

>KOG2041|consensus

Probab=98.52  E-value=1.9e-06  Score=78.37  Aligned_cols=198  Identities=13%  Similarity=0.174  Sum_probs=135.4

Q ss_pred             cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc---------------eeeecccCccceeEEEEeeCCCCCEEEEEeCC
Q psy14961         66 SFISCCIFPNSDQQILTGSGDCTCALWDVESSQ---------------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSD  130 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d  130 (320)
                      ....|+.|..+.+++++|+.||.+++-.+.+..               ..+++.+|++.|.-+.|.  ...+.|-++..+
T Consensus        15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWN--e~~QKLTtSDt~   92 (1189)
T KOG2041|consen   15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWN--ENNQKLTTSDTS   92 (1189)
T ss_pred             ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEec--cccccccccCCC
Confidence            456789999999999999999999999775421               234678999999888774  345688899999


Q ss_pred             CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        131 KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       131 g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                      |.|.+|-+..|......-      .                   ....+.|.+++|..+|..+....+||.|.+=.++..
T Consensus        93 GlIiVWmlykgsW~EEMi------N-------------------nRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN  147 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMI------N-------------------NRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN  147 (1189)
T ss_pred             ceEEEEeeecccHHHHHh------h-------------------CcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc
Confidence            999999887765332110      0                   012345789999999999999999999877666544


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe-------E-E---EEeecCCCceeEEEEC------
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-------R-V---NHLMGHENRVSCLQVS------  273 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~-------~-~---~~~~~h~~~i~~i~~s------  273 (320)
                      +..   .++-...-..-+.|++|...++.+-.+|..++||.+...       . +   ..+......|-.+.|.      
T Consensus       148 RIw---gKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~  224 (1189)
T KOG2041|consen  148 RIW---GKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQP  224 (1189)
T ss_pred             eec---chhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCcccc
Confidence            321   111111113457799999998888889999999965421       1 1   0111111224455554      


Q ss_pred             --cCCCeEEEecCCCceEeeec
Q psy14961        274 --PDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       274 --~~~~~l~s~s~D~~ir~~~~  293 (320)
                        ||-..||.+=..|.+.+...
T Consensus       225 v~pdrP~lavcy~nGr~QiMR~  246 (1189)
T KOG2041|consen  225 VPPDRPRLAVCYANGRMQIMRS  246 (1189)
T ss_pred             CCCCCCEEEEEEcCceehhhhh
Confidence              57778898888888776554

>KOG1275|consensus

Probab=98.51  E-value=4.6e-06  Score=77.86  Aligned_cols=180  Identities=13%  Similarity=0.202  Sum_probs=118.1

Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      ..++-|+-...+..+|+++.+..+......+.+.-+.    .++..+.+|...|.|.+-|.++.+.+.+           
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR----~Nnr~lf~G~t~G~V~LrD~~s~~~iht-----------  212 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR----YNNRNLFCGDTRGTVFLRDPNSFETIHT-----------  212 (1118)
T ss_pred             cceeecchhhheeeeecccceeeeeeeccCCceEEEE----ecCcEEEeecccceEEeecCCcCceeee-----------
Confidence            3455566566666778877776655543333343222    2457888888888888888777655444           


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC---------CCeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD---------DATCRLFDLRADKEVACYKKDSILFGATSV  228 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  228 (320)
                                      +..|++.|..++.+  |+.|++|+.         |--+++||++.-+.+.-.   ....+..-+
T Consensus       213 ----------------~~aHs~siSDfDv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI---~~~~~P~fl  271 (1118)
T KOG1275|consen  213 ----------------FDAHSGSISDFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI---QFPYGPQFL  271 (1118)
T ss_pred             ----------------eeccccceeeeecc--CCeEEEeecccccccccccchhhhhhhhhhhccCCc---ccccCchhh
Confidence                            44566666544444  778888764         456789999865543221   112223345


Q ss_pred             EEecC-CcEEEEEeCCCeEEEEcC---CCC-eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        229 DFSVS-GRLLFAGYNDYTINVWDS---LKC-CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       229 ~~s~~-~~~l~~g~~dg~v~~wd~---~~~-~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .|.|. .+.+++.+..|...+-|.   .+. ............+.++.+|++++.||-|..+|-|-+|.-
T Consensus       272 rf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  272 RFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             hhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            67775 457888889999999883   222 112223334556999999999999999999999999983

>KOG1920|consensus

Probab=98.49  E-value=8e-05  Score=71.95  Aligned_cols=238  Identities=12%  Similarity=0.089  Sum_probs=139.4

Q ss_pred             cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC----CCC
Q psy14961         66 SFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM----RTG  141 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~----~~~  141 (320)
                      ..|.++.|..++..++.+..+|.|.+-|+++..... ...-...|.+.+|  ++|++.++..+..+++.+-+-    -..
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aasw--S~Dee~l~liT~~~tll~mT~~f~~i~E  145 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASW--SPDEELLALITGRQTLLFMTKDFEPIAE  145 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEee--cCCCcEEEEEeCCcEEEEEeccccchhc
Confidence            578888898888889999999999999988765432 2223456666655  567888888888777765432    111


Q ss_pred             cEEEE-eccCCcccc------------CCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcCCCCEEEEe-----eCCCeE
Q psy14961        142 YCVQS-FEGHHNLIT------------DDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHPSGDAVATG-----SDDATC  202 (320)
Q Consensus       142 ~~~~~-~~~~~~~~~------------~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p~g~~l~s~-----s~dg~i  202 (320)
                      +.+.. ..+....+.            ..+..+..+.... +......-+... .+|+|--||+++|+.     .....|
T Consensus       146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~-~~IsWRgDg~~fAVs~~~~~~~~Rki  224 (1265)
T KOG1920|consen  146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHK-TSISWRGDGEYFAVSFVESETGTRKI  224 (1265)
T ss_pred             cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCC-ceEEEccCCcEEEEEEEeccCCceeE
Confidence            11100 000000000            0000000000000 000000112222 468999999998872     223789


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe---CCCeEEEEcCCCCeEEEE----eecCCCceeEEEECcC
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY---NDYTINVWDSLKCCRVNH----LMGHENRVSCLQVSPD  275 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---~dg~v~~wd~~~~~~~~~----~~~h~~~i~~i~~s~~  275 (320)
                      ++||-. +.. ... ..+...--.+++|-|.|..+++-.   +++.|.+|.... -.-..    +..-..+|..++|+.+
T Consensus       225 rV~drE-g~L-ns~-se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG-L~hg~f~l~~p~de~~ve~L~Wns~  300 (1265)
T KOG1920|consen  225 RVYDRE-GAL-NST-SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG-LRHGEFVLPFPLDEKEVEELAWNSN  300 (1265)
T ss_pred             EEeccc-chh-hcc-cCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCC-ccccccccCCcccccchheeeecCC
Confidence            999955 221 111 111112235788999999998853   567899997432 22111    1222335999999999


Q ss_pred             CCeEEE---ecCCCceEeeecchHhhhheeeeeeecCCcce
Q psy14961        276 GTAFSS---GSWDTTLRDEESKNRYVQYLLRSRITKPTQGL  313 (320)
Q Consensus       276 ~~~l~s---~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~  313 (320)
                      +..||.   ......|++|.++|.  +++++.-..-|.+++
T Consensus       301 sdiLAv~~~~~e~~~v~lwt~~Ny--hWYLKq~l~~~~~~~  339 (1265)
T KOG1920|consen  301 SDILAVVTSNLENSLVQLWTTGNY--HWYLKQELQFSQKAL  339 (1265)
T ss_pred             CCceeeeecccccceEEEEEecCe--EEEEEEEEecccccc
Confidence            999998   666677999998776  677776666666654

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.46  E-value=0.00062  Score=57.45  Aligned_cols=247  Identities=16%  Similarity=0.149  Sum_probs=142.5

Q ss_pred             eEEEEEcC-CCCEEEEecCCCe-EEEEEecccCCcc----cccccccccccCeEEEEecCCCCEEEEEe-----CCCeEE
Q psy14961         22 VMACAYAP-SGSVVASGGLDNK-VTVYAIALEDDSS----AKKKTVATHTSFISCCIFPNSDQQILTGS-----GDCTCA   90 (320)
Q Consensus        22 V~~~~~~~-~~~~l~s~~~dg~-i~v~~~~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-----~dg~v~   90 (320)
                      ..+++.+| .+..++.+-+.|. ..+||........    .....+.+|      -.|+++|++|++.=     ..|.|-
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGH------g~fs~dG~~LytTEnd~~~g~G~Ig   80 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGH------GVFSPDGRLLYTTENDYETGRGVIG   80 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecC------EEEcCCCCEEEEeccccCCCcEEEE
Confidence            35677788 5667777777765 4566653221110    011123333      36889999998853     358999


Q ss_pred             EEECC-CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         91 LWDVE-SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        91 iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      |||.. +-+.+.++..+.-.-..+.+  .++|+.|+++.-  -|.- ...+|+...      +.-+=+..+...|.++++
T Consensus        81 Vyd~~~~~~ri~E~~s~GIGPHel~l--~pDG~tLvVANG--GI~T-hpd~GR~kL------Nl~tM~psL~~ld~~sG~  149 (305)
T PF07433_consen   81 VYDAARGYRRIGEFPSHGIGPHELLL--MPDGETLVVANG--GIET-HPDSGRAKL------NLDTMQPSLVYLDARSGA  149 (305)
T ss_pred             EEECcCCcEEEeEecCCCcChhhEEE--cCCCCEEEEEcC--CCcc-CcccCceec------ChhhcCCceEEEecCCCc
Confidence            99998 55667777766555555655  457877777632  1110 000111110      111112334455677777


Q ss_pred             eeee--e--cCCCCCeEEEEEcCCCCEEEEeeCCCe-------EEEEECCCCeeEeEEecCc-----ceeeeEEEEEecC
Q psy14961        170 CVQS--F--EGHQSDVNSVKFHPSGDAVATGSDDAT-------CRLFDLRADKEVACYKKDS-----ILFGATSVDFSVS  233 (320)
Q Consensus       170 ~~~~--~--~~~~~~v~~v~~~p~g~~l~s~s~dg~-------i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~s~~  233 (320)
                      .+.+  +  ..|+-.|..+++.++|..++..-..|.       +-+++  .++.+..+....     ...-+.+++++++
T Consensus       150 ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~  227 (305)
T PF07433_consen  150 LLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRD  227 (305)
T ss_pred             eeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCC
Confidence            6665  3  337778999999999876655543332       22222  222222221111     0112578999999


Q ss_pred             CcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        234 GRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       234 ~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      +..+++.+ ..+.+.+||..++..+....  -..+..++-.+++ +++|.+.-..+++
T Consensus       228 g~~ia~tsPrGg~~~~~d~~tg~~~~~~~--l~D~cGva~~~~~-f~~ssG~G~~~~~  282 (305)
T PF07433_consen  228 GRLIAVTSPRGGRVAVWDAATGRLLGSVP--LPDACGVAPTDDG-FLVSSGQGQLIRL  282 (305)
T ss_pred             CCEEEEECCCCCEEEEEECCCCCEeeccc--cCceeeeeecCCc-eEEeCCCccEEEc
Confidence            98886666 57789999998887775443  2236677777776 7777766544443

>KOG4714|consensus

Probab=98.45  E-value=2.9e-06  Score=68.27  Aligned_cols=131  Identities=16%  Similarity=0.289  Sum_probs=82.9

Q ss_pred             eEEEEecCCC-CEEEEEeCCCeEEEEECCCcc-eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE
Q psy14961         68 ISCCIFPNSD-QQILTGSGDCTCALWDVESSQ-LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ  145 (320)
Q Consensus        68 v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~  145 (320)
                      |.++.-.|.. ..+++|+.||.+-+||..... +...++.|+.+++.+-|+|. +++.|+++++||.+..||..+...-.
T Consensus       182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk-~p~~Lft~sedGslw~wdas~~~l~i  260 (319)
T KOG4714|consen  182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPK-NPEHLFTCSEDGSLWHWDASTTFLSI  260 (319)
T ss_pred             chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCC-CchheeEecCCCcEEEEcCCCceEEe
Confidence            7776665544 456788899999999987653 34557889999999999986 57889999999999999976532111


Q ss_pred             Ee--ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961        146 SF--EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD  206 (320)
Q Consensus       146 ~~--~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd  206 (320)
                      ..  ..+...+..|..-...++     ...+....-.|+++...  |..|++|+.-+-|++++
T Consensus       261 ~~~~s~~s~WLsgD~v~s~i~i-----~~ll~~~~~SinsfDV~--g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  261 SNQASVISSWLSGDPVKSRIEI-----TSLLPSRSLSINSFDVL--GPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             cCccccccccccCCcccceEee-----eccccccceeeeeeecc--CceEEeccccceEEEec
Confidence            10  011111111110000011     01112223356666665  77899999888888775

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.45  E-value=0.00034  Score=62.81  Aligned_cols=247  Identities=13%  Similarity=0.075  Sum_probs=140.0

Q ss_pred             CCEEEEecCCCeEEEEEecccCCccccccccccc--------ccCeE-EEEecCCCCEEEEEeCCCeEEEEECCCcceee
Q psy14961         31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH--------TSFIS-CCIFPNSDQQILTGSGDCTCALWDVESSQLLQ  101 (320)
Q Consensus        31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h--------~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  101 (320)
                      +..++.++.++.+.-+|....+.....  .+...        ...+. ...  -.+..++.++.+|.+..+|.++++.+.
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~--~~~~~~~~~~~~~~~~~~~~~~--v~~~~v~v~~~~g~l~ald~~tG~~~W  144 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSV--DLSEKDGWFSKNKSALLSGGVT--VAGGKVYIGSEKGQVYALNAEDGEVAW  144 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEE--cCCCcccccccccccccccccE--EECCEEEEEcCCCEEEEEECCCCCCcc
Confidence            456777777788877776433222111  01110        00010 011  135678888899999999999999887


Q ss_pred             ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC---------cc---------ccCCCeEEEE
Q psy14961        102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH---------NL---------ITDDKLVNIW  163 (320)
Q Consensus       102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~---------~~---------~~~d~~i~iw  163 (320)
                      ..+.. +.+.+   .|.-.+..++.+..++.+..+|.++|+.+..++...         ..         ...++.+..+
T Consensus       145 ~~~~~-~~~~s---sP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~  220 (394)
T PRK11138        145 QTKVA-GEALS---RPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAV  220 (394)
T ss_pred             cccCC-Cceec---CCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEE
Confidence            66533 22221   111124578888889999999999998776554211         00         1235667777


Q ss_pred             ECcCCeeeeeecCCC----C---CeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        164 DMRTGYCVQSFEGHQ----S---DVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       164 d~~~~~~~~~~~~~~----~---~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                      |..+++..-......    .   ....+.-+|  .+..++.++.+|.+.-+|..+++.+-......    ...  ....+
T Consensus       221 d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~----~~~--~~~~~  294 (394)
T PRK11138        221 LMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS----VND--FAVDG  294 (394)
T ss_pred             EccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC----ccC--cEEEC
Confidence            777776544332100    0   011111223  25577778889999999999887653322111    111  12246


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ..++.++.+|.+...|..+++.+=+...-.. ...+...  .+..|+.++.||.+...+.
T Consensus       295 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~  352 (394)
T PRK11138        295 GRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINR  352 (394)
T ss_pred             CEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEEC
Confidence            6777888899999999887755422111011 1122222  2346677888999887774

>KOG2314|consensus

Probab=98.44  E-value=3.9e-05  Score=68.14  Aligned_cols=275  Identities=16%  Similarity=0.184  Sum_probs=147.1

Q ss_pred             CeEeecccceeEEEEEe--CccceEE-EEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTM--PATWVMA-CAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~--~~~~V~~-~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |+|||+.++.....+..  ....++- ..||.|++++|--.. .+|.||+..    +..+...-.-.-+.|....|+|.+
T Consensus       284 l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtp----sf~lld~Kslki~gIr~FswsP~~  358 (698)
T KOG2314|consen  284 LIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETP----SFMLLDKKSLKISGIRDFSWSPTS  358 (698)
T ss_pred             EEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecC----ceeeecccccCCccccCcccCCCc
Confidence            57999999998766655  2233343 368999999998765 568999753    111111111122445556677765


Q ss_pred             CEEEEEe-----CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE----------eCCCeEEEEeCCCCc
Q psy14961         78 QQILTGS-----GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG----------SSDKLVNIWDMRTGY  142 (320)
Q Consensus        78 ~~l~s~~-----~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~----------~~dg~i~lwd~~~~~  142 (320)
                      +.|+--.     .-..+.+-.+.+.+.++.-..  ..|..+.++...+|++|..-          +.-..+.++.++...
T Consensus       359 ~llAYwtpe~~~~parvtL~evPs~~~iRt~nl--fnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKd  436 (698)
T KOG2314|consen  359 NLLAYWTPETNNIPARVTLMEVPSKREIRTKNL--FNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKD  436 (698)
T ss_pred             ceEEEEcccccCCcceEEEEecCccceeeeccc--eeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccC
Confidence            5444211     012344444444444443322  23444455555566665421          111234455444322


Q ss_pred             E----------EE--EeccCCccc------cCCCeEEEEECcC-C---eeeeeecCCCCCeEEEEEcCCCCEEEEe---e
Q psy14961        143 C----------VQ--SFEGHHNLI------TDDKLVNIWDMRT-G---YCVQSFEGHQSDVNSVKFHPSGDAVATG---S  197 (320)
Q Consensus       143 ~----------~~--~~~~~~~~~------~~d~~i~iwd~~~-~---~~~~~~~~~~~~v~~v~~~p~g~~l~s~---s  197 (320)
                      .          +.  .+.++.+..      .....+.+|.+++ .   ..+..+  .....+.+.|+|.|..++.+   |
T Consensus       437 Ipve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~--dk~~~N~vfwsPkG~fvvva~l~s  514 (698)
T KOG2314|consen  437 IPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKEL--DKKFANTVFWSPKGRFVVVAALVS  514 (698)
T ss_pred             CCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhh--cccccceEEEcCCCcEEEEEEecc
Confidence            1          11  112222110      1244567776653 1   122222  22346889999999988665   4


Q ss_pred             CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC------CCceeEEE
Q psy14961        198 DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH------ENRVSCLQ  271 (320)
Q Consensus       198 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h------~~~i~~i~  271 (320)
                      ..|.+.++|..-.....  ......+..+.+.|.|.|+|++++++....+   ...+..+.++.|.      -+.-....
T Consensus       515 ~~g~l~F~D~~~a~~k~--~~~~eh~~at~veWDPtGRYvvT~ss~wrhk---~d~GYri~tfqGrll~~~~i~~f~qF~  589 (698)
T KOG2314|consen  515 RRGDLEFYDTDYADLKD--TASPEHFAATEVEWDPTGRYVVTSSSSWRHK---VDNGYRIFTFQGRLLKEDIIDRFKQFL  589 (698)
T ss_pred             cccceEEEecchhhhhh--ccCccccccccceECCCCCEEEEeeehhhhc---cccceEEEEeecHHHHHHHHHHHHhhc
Confidence            67899999987421111  1112234467889999999999998654332   2334444444432      13345677


Q ss_pred             ECcCCCeEEEecCCCceE
Q psy14961        272 VSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       272 ~s~~~~~l~s~s~D~~ir  289 (320)
                      |-|....+.|--.-+.||
T Consensus       590 WRPRPps~LS~e~~KkIk  607 (698)
T KOG2314|consen  590 WRPRPPSLLSEEKQKKIK  607 (698)
T ss_pred             cCCCCCcccCHHHHHHHH
Confidence            888887777755444444

>KOG2114|consensus

Probab=98.42  E-value=8.5e-05  Score=69.29  Aligned_cols=242  Identities=17%  Similarity=0.213  Sum_probs=138.7

Q ss_pred             EEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccC-eEEEEecCCCCEEEEEeCCC-----eEEEEECCCc--
Q psy14961         26 AYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSF-ISCCIFPNSDQQILTGSGDC-----TCALWDVESS--   97 (320)
Q Consensus        26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~--   97 (320)
                      ++++.+..++.|+.+|.|.+++-..     .....+..+... |..++......+|++-++|+     .+++|+++.-  
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~s~-----~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~  104 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNSSF-----QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDK  104 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecccc-----eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCC
Confidence            4788999999999999988875321     222344555444 55565555446788877764     4899998542  


Q ss_pred             ----cee---eecc----cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECc
Q psy14961         98 ----QLL---QSFH----GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR  166 (320)
Q Consensus        98 ----~~~---~~~~----~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~  166 (320)
                          +++   +.+.    -...++.+++++.  +-+.+++|-.+|.|..+.   |...+           |...+     
T Consensus       105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~--~l~~Iv~Gf~nG~V~~~~---GDi~R-----------Drgsr-----  163 (933)
T KOG2114|consen  105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSE--DLKTIVCGFTNGLVICYK---GDILR-----------DRGSR-----  163 (933)
T ss_pred             CCCcceeeeeeeeccCCCCCCCcceEEEEEc--cccEEEEEecCcEEEEEc---Ccchh-----------ccccc-----
Confidence                222   1111    1234555566543  467899999999987763   21111           11111     


Q ss_pred             CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE-EecCcceeeeEEEEEecCCcEEEEEeCCCe
Q psy14961        167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC-YKKDSILFGATSVDFSVSGRLLFAGYNDYT  245 (320)
Q Consensus       167 ~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~  245 (320)
                          ......-..+|+.+++..++..++-+..-..|.+|.+....+... ...+  ..+..+..|++....+++++.. .
T Consensus       164 ----~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~--G~~lnCss~~~~t~qfIca~~e-~  236 (933)
T KOG2114|consen  164 ----QDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNN--GISLNCSSFSDGTYQFICAGSE-F  236 (933)
T ss_pred             ----eeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccC--CccceeeecCCCCccEEEecCc-e
Confidence                111112356899999998888733333345789998874332222 2222  2334455566555546555544 5


Q ss_pred             EEEEcCCCCeEEEEee-cCCCceeE------EEECcCCCeEE---E-ecCCCceEeeecchHhhhh
Q psy14961        246 INVWDSLKCCRVNHLM-GHENRVSC------LQVSPDGTAFS---S-GSWDTTLRDEESKNRYVQY  300 (320)
Q Consensus       246 v~~wd~~~~~~~~~~~-~h~~~i~~------i~~s~~~~~l~---s-~s~D~~ir~~~~~~~~~~~  300 (320)
                      +.+||.....+..++. +|......      +++.++...--   + .+....+.++|.+++|..|
T Consensus       237 l~fY~sd~~~~cfaf~~g~kk~~~~~~~g~~L~v~~~~~~~~~s~s~ss~~~i~~~~d~~n~~v~y  302 (933)
T KOG2114|consen  237 LYFYDSDGRGPCFAFEVGEKKEMLVFSFGLLLCVTTDKGTENTSLSNSSSNRIFKAYDLRNRYVLY  302 (933)
T ss_pred             EEEEcCCCcceeeeecCCCeEEEEEEecCEEEEEEccCCCCCcccCccchhheeehhhhcCcccch
Confidence            9999988777777776 77654322      23333322111   1 1123334577788887754

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.40  E-value=0.0012  Score=59.68  Aligned_cols=98  Identities=18%  Similarity=0.228  Sum_probs=72.7

Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      .....|.|.+++|+.+.|+.|+.||.|.+||...+....  ...  .+-+..++|+|+|.++++|+..|.+.+||+.-..
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~--~ka--~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL--AKA--EFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee--eee--cccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            366789999999999999999999999999987664332  222  2335789999999999999999999999964321


Q ss_pred             -------------EEEEee---cCCCceeEEEECcCCC
Q psy14961        256 -------------RVNHLM---GHENRVSCLQVSPDGT  277 (320)
Q Consensus       256 -------------~~~~~~---~h~~~i~~i~~s~~~~  277 (320)
                                   ..-.+.   .+...+..|.|++.+.
T Consensus       333 i~~qLlsEd~~P~~~L~Ls~yf~~~~~L~~iqW~~~~~  370 (545)
T PF11768_consen  333 IKMQLLSEDATPKSTLQLSKYFRVSSSLVHIQWAPAPQ  370 (545)
T ss_pred             cceeeccccCCCccEEeeehhccCcchhheeEeccCCC
Confidence                         111122   3455677888885443

>KOG1912|consensus

Probab=98.36  E-value=7e-05  Score=69.14  Aligned_cols=271  Identities=17%  Similarity=0.159  Sum_probs=171.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCc---cccccccccccc----------
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDS---SAKKKTVATHTS----------   66 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~---~~~~~~~~~h~~----------   66 (320)
                      |.+|+..++++.=.+........++.++| |...+..-+..|.+.+-+.-...+.   ....+....|..          
T Consensus       137 lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at  216 (1062)
T KOG1912|consen  137 LVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETAT  216 (1062)
T ss_pred             EEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhc
Confidence            35899999988877777778888889998 4455555555676666654211111   111111111111          


Q ss_pred             --C-----------eEE--EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC
Q psy14961         67 --F-----------ISC--CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK  131 (320)
Q Consensus        67 --~-----------v~~--~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg  131 (320)
                        .           .+|  .+|+|.-+.++.....+.+.++|++-..++....-..+.+.-+.+.|.+.-+.|++...||
T Consensus       217 ~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG  296 (1062)
T KOG1912|consen  217 GNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNG  296 (1062)
T ss_pred             cccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCC
Confidence              0           112  2346666666666678889999998887777665555656667888888778999999999


Q ss_pred             eEEEEeCCC----------------CcE---EEEe--------------------------------c------------
Q psy14961        132 LVNIWDMRT----------------GYC---VQSF--------------------------------E------------  148 (320)
Q Consensus       132 ~i~lwd~~~----------------~~~---~~~~--------------------------------~------------  148 (320)
                      .+.+|-.+.                +..   ++..                                .            
T Consensus       297 ~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~  376 (1062)
T KOG1912|consen  297 RLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSS  376 (1062)
T ss_pred             eEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCccccccc
Confidence            999985432                100   0000                                0            


Q ss_pred             ---------------------------c-CCc---------------------------------cccCCCeEEEEECcC
Q psy14961        149 ---------------------------G-HHN---------------------------------LITDDKLVNIWDMRT  167 (320)
Q Consensus       149 ---------------------------~-~~~---------------------------------~~~~d~~i~iwd~~~  167 (320)
                                                 + |..                                 +.+..|+|.++|+.+
T Consensus       377 iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst  456 (1062)
T KOG1912|consen  377 IELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVST  456 (1062)
T ss_pred             ccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecc
Confidence                                       0 000                                 001256788888888


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEee----------CCCeEEEEECCCCeeEeEE-ecCcceeeeEEEEEecCCcE
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGS----------DDATCRLFDLRADKEVACY-KKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s----------~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~  236 (320)
                      +.....+.-|...|.++.|--... |++.+          --+.+.+-|+++|...... ...+....+..+..|..+.|
T Consensus       457 ~~v~~~fsvht~~VkgleW~g~ss-lvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~y  535 (1062)
T KOG1912|consen  457 NAVAASFSVHTSLVKGLEWLGNSS-LVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRY  535 (1062)
T ss_pred             hhhhhhhcccccceeeeeecccee-EEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCce
Confidence            877777888999999999986544 33322          2245778899988654322 12222234678889999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeecCCCc-eeEEEEC
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMGHENR-VSCLQVS  273 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~-i~~i~~s  273 (320)
                      |+....+--+.+||+.....+.. +.-.-+ |+.+.|+
T Consensus       536 Lai~Fr~~plEiwd~kt~~~lr~-mS~a~P~it~leWs  572 (1062)
T KOG1912|consen  536 LAILFRREPLEIWDLKTLRMLRL-MSLALPLITVLEWS  572 (1062)
T ss_pred             EEEEecccchHHHhhccchHHHH-HhhcCCcEEEEeec
Confidence            99999999999999866544432 222334 7778887

>KOG2066|consensus

Probab=98.29  E-value=7.9e-05  Score=68.98  Aligned_cols=188  Identities=15%  Similarity=0.225  Sum_probs=121.0

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      .+.+++|+++  +++++-|..+|.+++++....  .    .+...|.+.      ..+|+++++|+.||+|.|-.+-+.+
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~--~----~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~  104 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN--P----KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDD  104 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecCCc--c----ccccccccc------ccCCceEEEecCCCcEEEeeccCCc
Confidence            3456677765  458999999999999986421  1    122234332      5678999999999999999887776


Q ss_pred             eeeecccCccceeEEEEeeC---CCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         99 LLQSFHGHTGELMDLDLAPS---ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~---~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      ...++. ...++.+++++|+   ...+.+++|+..| +.++.-+--             .....+            .+.
T Consensus       105 ~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wl-------------gnk~~v------------~l~  157 (846)
T KOG2066|consen  105 EITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWL-------------GNKDSV------------VLS  157 (846)
T ss_pred             cceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhh-------------cCccce------------eee
Confidence            655443 3456777888775   2346889998888 666542110             000000            122


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce----eeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL----FGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      ...++|.++.|.  |+++|=++.+| ++++|....+.+...+.....    .....+.|.+ ...|+.|..| +|++..+
T Consensus       158 ~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~-~~~LVIGW~d-~v~i~~I  232 (846)
T KOG2066|consen  158 EGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQD-EDRLVIGWGD-SVKICSI  232 (846)
T ss_pred             cCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecC-CCeEEEecCC-eEEEEEE
Confidence            235689999998  67777777666 899999888776655443211    1123455654 4567788766 5777654


Q ss_pred             C
Q psy14961        252 L  252 (320)
Q Consensus       252 ~  252 (320)
                      .
T Consensus       233 ~  233 (846)
T KOG2066|consen  233 K  233 (846)
T ss_pred             e
Confidence            4

>KOG2114|consensus

Probab=98.28  E-value=0.00019  Score=67.08  Aligned_cols=209  Identities=16%  Similarity=0.194  Sum_probs=127.7

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc-eeEEEEeeCCCCCEEEEEeCCC-----eEEEEeCCC
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE-LMDLDLAPSETGNTFVSGSSDK-----LVNIWDMRT  140 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~dg-----~i~lwd~~~  140 (320)
                      .++|+  ++.+..++.|+.+|.|.+.+- ..+.+..++++... |..+-.  ....++|++.+.|+     .+++||+..
T Consensus        27 ~isc~--~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~--~~~~~~L~sv~Ed~~~np~llkiw~lek  101 (933)
T KOG2114|consen   27 AISCC--SSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYI--LNKQNFLFSVGEDEQGNPVLLKIWDLEK  101 (933)
T ss_pred             ceeEE--cCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhc--ccCceEEEEEeecCCCCceEEEEecccc
Confidence            44444  566789999999999988763 34555777777666 333322  22235777776665     488888753


Q ss_pred             CcEEEEeccCCccccCCCe---EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC--CCeeE-e
Q psy14961        141 GYCVQSFEGHHNLITDDKL---VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR--ADKEV-A  214 (320)
Q Consensus       141 ~~~~~~~~~~~~~~~~d~~---i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~--~~~~~-~  214 (320)
                      .+.      ..    ....   .+++...       .+....++.+++.|.+-+.+|.|-.||.|..+.-+  ..+.. .
T Consensus       102 ~~~------n~----sP~c~~~~ri~~~~-------np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~  164 (933)
T KOG2114|consen  102 VDK------NN----SPQCLYEHRIFTIK-------NPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQ  164 (933)
T ss_pred             cCC------CC----CcceeeeeeeeccC-------CCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccce
Confidence            210      00    0001   1121111       11134578899999998889999999999998532  11111 1


Q ss_pred             EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE-EEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV-NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~-~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+.. ...-+++.+.+..+++.++-......|.+|.+....+. ..+..|..+++|-+|++-...|+.|+. ..+.++++
T Consensus       165 ~~~~-~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~s  242 (933)
T KOG2114|consen  165 DYSH-RGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDS  242 (933)
T ss_pred             eeec-cCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcC
Confidence            1111 12234678888888887333334457999987754433 336778889999999986665665554 56788887


Q ss_pred             chHhhh
Q psy14961        294 KNRYVQ  299 (320)
Q Consensus       294 ~~~~~~  299 (320)
                      ..+-++
T Consensus       243 d~~~~c  248 (933)
T KOG2114|consen  243 DGRGPC  248 (933)
T ss_pred             CCccee
Confidence            666554

>KOG4649|consensus

Probab=98.24  E-value=0.0015  Score=53.21  Aligned_cols=254  Identities=13%  Similarity=0.116  Sum_probs=119.2

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEE-EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISC-CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG  108 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  108 (320)
                      -|.+++.|+..|.+.+.++..... ......+    ..|.+ ....++++.++.|+.|++...-|+.+..++...+...+
T Consensus        62 vgdfVV~GCy~g~lYfl~~~tGs~-~w~f~~~----~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~  136 (354)
T KOG4649|consen   62 VGDFVVLGCYSGGLYFLCVKTGSQ-IWNFVIL----ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGG  136 (354)
T ss_pred             ECCEEEEEEccCcEEEEEecchhh-eeeeeeh----hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCc
Confidence            456788888889888887753221 1111111    22222 23456788999999999999999998888776653322


Q ss_pred             ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-----------EEEE----eccCCccccCCCeEE--------EEEC
Q psy14961        109 ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-----------CVQS----FEGHHNLITDDKLVN--------IWDM  165 (320)
Q Consensus       109 ~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-----------~~~~----~~~~~~~~~~d~~i~--------iwd~  165 (320)
                      -..+-++++- ++ .|+.+...|.+.--+.+...           .+..    ........+-||.+.        +|..
T Consensus       137 ~f~sP~i~~g-~~-sly~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~splcv~~sv~i~~VdG~l~~f~~sG~qvwr~  214 (354)
T KOG4649|consen  137 TFVSPVIAPG-DG-SLYAAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPLCVGSSVIITTVDGVLTSFDESGRQVWRP  214 (354)
T ss_pred             eeccceecCC-Cc-eEEEEeccceEEEEccCCCCcceehhhhcCCccccCceeccceEEEEEeccEEEEEcCCCcEEEee
Confidence            2222223322 22 33334344443332322221           0000    000000011233333        4444


Q ss_pred             cCCeeeeeecCCCCCe-EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC
Q psy14961        166 RTGYCVQSFEGHQSDV-NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY  244 (320)
Q Consensus       166 ~~~~~~~~~~~~~~~v-~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg  244 (320)
                      +++-++..-+--..+- .-+.+..+ +-+.+...-.--.+|..+.+.....+..++..+...+.-.| ..++|..++.||
T Consensus       215 ~t~GpIf~~Pc~s~Ps~q~i~~~~~-~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~l~F~~h~~~~S-~~~ll~~~s~dg  292 (354)
T KOG4649|consen  215 ATKGPIFMEPCESRPSCQQISLENE-NCFCAPLPIAGHLLWATQSGTTLHVYLSPKLRFDLHSPGIS-YPKLLRRSSGDG  292 (354)
T ss_pred             cCCCceecccccCCCcceEEEEecC-CeEEEeccccceEEEEecCCcEEEEEeCcccceeccCCCCc-chhhhhhhcCCC
Confidence            4443332211111111 12222222 22322222223346666666544444333221111111001 245677788899


Q ss_pred             eEEEEcCCCCeEEEEeecCCCce---eEEE-----EC-c---CCCeEEEecCCCceEeeecch
Q psy14961        245 TINVWDSLKCCRVNHLMGHENRV---SCLQ-----VS-P---DGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       245 ~v~~wd~~~~~~~~~~~~h~~~i---~~i~-----~s-~---~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .+.+--..  ..+.+...|.+.+   ..|.     |+ |   +| +|+.|..|..+|-||...
T Consensus       293 kv~il~~~--~sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~g-rl~igcRDdYv~cldl~~  352 (354)
T KOG4649|consen  293 KVMILMTS--KSLAEISSNGGELQNLEAIELSNEIFSSPVIIDG-RLLIGCRDDYVRCLDLDT  352 (354)
T ss_pred             cEEEEEec--ccccccccCCCccceEEEeecCcccccCCeEEcc-EEEEEEccCeEEEEeccc
Confidence            88886322  2233344444433   2222     32 2   34 577899999999998753

>KOG1832|consensus

Probab=98.22  E-value=1.5e-06  Score=80.84  Aligned_cols=202  Identities=21%  Similarity=0.329  Sum_probs=130.0

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CC-eEEEEEC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DC-TCALWDV   94 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg-~v~iwd~   94 (320)
                      .+....++++|+-+.+.|+.|+..|.|++|++..+.    ......+|.++|+-+..+.+|..+++.+. .. -..+|++
T Consensus      1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~----~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS----MEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred             ccccceeeEEeecCCceEEeeeccceEEEEEccCcc----ccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence            344567899999999999999999999999986432    23356689999999998888887766543 33 4678987


Q ss_pred             CC-cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe----------------ccCCccccCC
Q psy14961         95 ES-SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF----------------EGHHNLITDD  157 (320)
Q Consensus        95 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~----------------~~~~~~~~~d  157 (320)
                      .. +.+...|..    -.++.|+.+  ...-+.|+......+||+.++..+.++                ++....+-.|
T Consensus      1175 ~s~~~~~Hsf~e----d~~vkFsn~--~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIlnd 1248 (1516)
T KOG1832|consen 1175 SSTGGPRHSFDE----DKAVKFSNS--LQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILND 1248 (1516)
T ss_pred             ccccCccccccc----cceeehhhh--HHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEeeC
Confidence            53 444444432    234566533  223344445556889999887654432                1111112222


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      |  .+||.+..+.+..|......+ .=.|||+|..++.-+     .|||+++-+.+...+.    ..-..+.|+..|..+
T Consensus      1249 G--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~----Ldqc~VtFNstG~Vm 1316 (1516)
T KOG1832|consen 1249 G--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPS----LDQCAVTFNSTGDVM 1316 (1516)
T ss_pred             c--eeeeeccHHHHhhhhhheecc-cccccCCCceEEeec-----hhhhhHHHHHHhcCcc----ccceEEEeccCccch
Confidence            2  479998887777665544332 345899999888776     5999998665432211    123457788888766


Q ss_pred             EEE
Q psy14961        238 FAG  240 (320)
Q Consensus       238 ~~g  240 (320)
                      +..
T Consensus      1317 Ya~ 1319 (1516)
T KOG1832|consen 1317 YAM 1319 (1516)
T ss_pred             hhh
Confidence            543

>KOG0882|consensus

Probab=98.17  E-value=5.2e-05  Score=65.70  Aligned_cols=221  Identities=18%  Similarity=0.119  Sum_probs=135.1

Q ss_pred             eCccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCC--CEEEEE-eCCCeEEEE
Q psy14961         17 MPATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD--QQILTG-SGDCTCALW   92 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~-~~dg~v~iw   92 (320)
                      .|...+.+++.+-++-.+.|.+. |..++++|+..-+...+......  .+. .++..++..  ..++.+ -.++.+.++
T Consensus        51 aHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~l--Pg~-a~wv~skGd~~s~IAVs~~~sg~i~Vv  127 (558)
T KOG0882|consen   51 AHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDL--PGF-AEWVTSKGDKISLIAVSLFKSGKIFVV  127 (558)
T ss_pred             HHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccC--CCc-eEEecCCCCeeeeEEeecccCCCcEEE
Confidence            45556778888999999999777 99999999864332222211111  111 122223221  133333 357899999


Q ss_pred             ECCCc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         93 DVESS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        93 d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      |....  +....-..|..+|.++.+.+.  ++.++|....|.|.-|.....  .+..+         +. .-|.++...-
T Consensus       128 D~~~d~~q~~~fkklH~sPV~~i~y~qa--~Ds~vSiD~~gmVEyWs~e~~--~qfPr---------~~-l~~~~K~eTd  193 (558)
T KOG0882|consen  128 DGFGDFCQDGYFKKLHFSPVKKIRYNQA--GDSAVSIDISGMVEYWSAEGP--FQFPR---------TN-LNFELKHETD  193 (558)
T ss_pred             CCcCCcCccceecccccCceEEEEeecc--ccceeeccccceeEeecCCCc--ccCcc---------cc-ccccccccch
Confidence            86432  223333458889988877654  678888888999999987531  11000         00 1123333222


Q ss_pred             eeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec--------------------------------
Q psy14961        171 VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK--------------------------------  218 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------------------------------  218 (320)
                      +..+.-......++.|+|+|..+.+-+.|..|+++++.+++.++.+..                                
T Consensus       194 Ly~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek  273 (558)
T KOG0882|consen  194 LYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEK  273 (558)
T ss_pred             hhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhh
Confidence            333333445668999999999999999999999999988764432210                                


Q ss_pred             CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE
Q psy14961        219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR  256 (320)
Q Consensus       219 ~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~  256 (320)
                      +.. ...+.+.|...|++|+.|+--| |++.++.+.+.
T Consensus       274 ~~~-~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v  309 (558)
T KOG0882|consen  274 HGS-TVGTNAVFDESGNFLLYGTILG-IKVINLDTNTV  309 (558)
T ss_pred             hcC-cccceeEEcCCCCEEEeeccee-EEEEEeecCeE
Confidence            000 1124577888999999988665 56665554443

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.13  E-value=2.7e-05  Score=69.85  Aligned_cols=71  Identities=24%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .+.+++++|+...++.|+.||.|.+||....  +.++..+.-..+.++|+|+|.++++|+.-|.+..||.+-.
T Consensus       261 ~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~--~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  261 QVICCARSPSEDKLVLGCEDGSIILYDTTRG--VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             cceEEecCcccceEEEEecCCeEEEEEcCCC--eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            4578999999999999999999999997654  3334444556789999999999999999999999995433

>KOG2066|consensus

Probab=98.10  E-value=0.00016  Score=66.97  Aligned_cols=181  Identities=18%  Similarity=0.260  Sum_probs=117.6

Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV  144 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~  144 (320)
                      ...++|+.++  +..++.|.-+|.|++++.+.. + .....|...        ..+|+++++|+.||.+.+-.+-+.+..
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~--------~~~Gey~asCS~DGkv~I~sl~~~~~~  106 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS--------ILEGEYVASCSDDGKVVIGSLFTDDEI  106 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc--------ccCCceEEEecCCCcEEEeeccCCccc
Confidence            3556777765  568999999999999987533 2 222223322        456899999999999988776554322


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-----CCEEEEeeCCCeEEEEECC---CCeeEeEE
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-----GDAVATGSDDATCRLFDLR---ADKEVACY  216 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-----g~~l~s~s~dg~i~iwd~~---~~~~~~~~  216 (320)
                      .+                +|            ...++.+++++|+     .+.+++|+.-| +.++.-+   ....+...
T Consensus       107 ~~----------------~d------------f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~  157 (846)
T KOG2066|consen  107 TQ----------------YD------------FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLS  157 (846)
T ss_pred             ee----------------Ee------------cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeee
Confidence            21                11            3457899999997     56799999888 7776421   11112111


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC------CceeEEEECcCCCeEEEecCCCceEe
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE------NRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~------~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      ....   .+.++.|  .|+++|-++.+| |++||+...+.+..+....      ..-..+.|.++.+ |+.| |-.+|++
T Consensus       158 ~~eG---~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i  229 (846)
T KOG2066|consen  158 EGEG---PIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIG-WGDSVKI  229 (846)
T ss_pred             cCcc---ceEEEEe--cCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEe-cCCeEEE
Confidence            2222   2456666  588999998887 9999998877776554322      2345788888654 5555 4456776


Q ss_pred             eecc
Q psy14961        291 EESK  294 (320)
Q Consensus       291 ~~~~  294 (320)
                      -..+
T Consensus       230 ~~I~  233 (846)
T KOG2066|consen  230 CSIK  233 (846)
T ss_pred             EEEe
Confidence            6654

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.01  E-value=0.0068  Score=51.31  Aligned_cols=196  Identities=12%  Similarity=0.131  Sum_probs=106.5

Q ss_pred             CCCEEEEEeCCC-eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961         76 SDQQILTGSGDC-TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        76 ~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      ....++.+-+-| ...+||..+++....+....+.-..=.-.++++|++|++.-.|-                      .
T Consensus        16 ~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~----------------------~   73 (305)
T PF07433_consen   16 RPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDY----------------------E   73 (305)
T ss_pred             CCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEecccc----------------------C
Confidence            344555666655 45678988888776554433322111112356788877653321                      1


Q ss_pred             cCCCeEEEEECc-CCeeeeeecCCCCCeEEEEEcCCCCEEEEee------------------CCCeEEEEECCCCeeEeE
Q psy14961        155 TDDKLVNIWDMR-TGYCVQSFEGHQSDVNSVKFHPSGDAVATGS------------------DDATCRLFDLRADKEVAC  215 (320)
Q Consensus       155 ~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s------------------~dg~i~iwd~~~~~~~~~  215 (320)
                      ...+.|-+||.+ .-+.+.++..|.-.-..+.+.|+|+.|+.+.                  ++-.+.+.|..+++.+..
T Consensus        74 ~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q  153 (305)
T PF07433_consen   74 TGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQ  153 (305)
T ss_pred             CCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeee
Confidence            223444455544 3334445555554555677778877666652                  223344455566665544


Q ss_pred             Eec--CcceeeeEEEEEecCCcEEEEEeCCC-------eEEEEcCCCCeEEEEe-----ecCCCceeEEEECcCCCeE-E
Q psy14961        216 YKK--DSILFGATSVDFSVSGRLLFAGYNDY-------TINVWDSLKCCRVNHL-----MGHENRVSCLQVSPDGTAF-S  280 (320)
Q Consensus       216 ~~~--~~~~~~~~~~~~s~~~~~l~~g~~dg-------~v~~wd~~~~~~~~~~-----~~h~~~i~~i~~s~~~~~l-~  280 (320)
                      ...  .....++.-++++++|..++..-..|       -|-+++..........     ..-.+-|-+|++++++.++ +
T Consensus       154 ~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~  233 (305)
T PF07433_consen  154 VELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAV  233 (305)
T ss_pred             eecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEE
Confidence            332  22334566778888887665543322       2444443321111111     1223458899999999876 5


Q ss_pred             EecCCCceEeeec
Q psy14961        281 SGSWDTTLRDEES  293 (320)
Q Consensus       281 s~s~D~~ir~~~~  293 (320)
                      |+=.-+.+-+||.
T Consensus       234 tsPrGg~~~~~d~  246 (305)
T PF07433_consen  234 TSPRGGRVAVWDA  246 (305)
T ss_pred             ECCCCCEEEEEEC
Confidence            5557888999975

>smart00320 WD40 WD40 repeats

Probab=97.98  E-value=3e-05  Score=43.25  Aligned_cols=38  Identities=32%  Similarity=0.407  Sum_probs=33.7

Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+...+..|...|.++.|++++.++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34556778999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1645|consensus

Probab=97.93  E-value=0.002  Score=55.38  Aligned_cols=81  Identities=19%  Similarity=0.221  Sum_probs=68.2

Q ss_pred             cccccccCeEEEEecCCCC-EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         60 TVATHTSFISCCIFPNSDQ-QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      -+..|...|..+.|++... .+..++.+..|+|.|+++...+..+..+ ..+++++|.-+. .++++.|-.+|.|.+||+
T Consensus       188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde-~h~IYaGl~nG~VlvyD~  265 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDE-RHVIYAGLQNGMVLVYDM  265 (463)
T ss_pred             cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCC-cceeEEeccCceEEEEEc
Confidence            3456777888999988765 6888999999999999999988888877 778999887654 689999999999999999


Q ss_pred             CCCc
Q psy14961        139 RTGY  142 (320)
Q Consensus       139 ~~~~  142 (320)
                      +...
T Consensus       266 R~~~  269 (463)
T KOG1645|consen  266 RQPE  269 (463)
T ss_pred             cCCC
Confidence            8643

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.89  E-value=0.0042  Score=57.51  Aligned_cols=205  Identities=17%  Similarity=0.143  Sum_probs=114.2

Q ss_pred             cCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC---CC-eEEEEeCCCCcEEEEec
Q psy14961         74 PNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS---DK-LVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        74 ~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg-~i~lwd~~~~~~~~~~~  148 (320)
                      ++++..+...+ ..+.+.+.|.++.+...++... +....+.+  +++|.++++.+.   .| .+..-+......+..+.
T Consensus       201 pnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vd-gnpd~v~~--spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn  277 (635)
T PRK02888        201 PNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVD-GNLDNVDT--DYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN  277 (635)
T ss_pred             CCCCCEeecccceeEEEEEEECccceEEEEEEeC-CCcccceE--CCCCCEEEEeccCcccCcceeeeccccCceEEEEc
Confidence            44555443332 2456677777776655554422 12222333  456788877752   22 23333332222222221


Q ss_pred             c----------CCccccCCCeEEEEECcC----C-eeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCee
Q psy14961        149 G----------HHNLITDDKLVNIWDMRT----G-YCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKE  212 (320)
Q Consensus       149 ~----------~~~~~~~d~~i~iwd~~~----~-~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~  212 (320)
                      .          .... ..++.|.+.|.++    + ..+..+. -......++++|||++++.++ .+.++.+.|+...+.
T Consensus       278 i~~iea~vkdGK~~~-V~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~  355 (635)
T PRK02888        278 IARIEEAVKAGKFKT-IGGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD  355 (635)
T ss_pred             hHHHHHhhhCCCEEE-ECCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence            1          1111 1356788999887    3 3444443 334557899999999986655 588999999976443


Q ss_pred             Ee---------EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC----------CeEEEEee-----cCCCcee
Q psy14961        213 VA---------CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK----------CCRVNHLM-----GHENRVS  268 (320)
Q Consensus       213 ~~---------~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~----------~~~~~~~~-----~h~~~i~  268 (320)
                      ..         .........+..-.+|+++|....+-.-|.+|..|++..          ...+..+.     +|...-.
T Consensus       356 ~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~  435 (635)
T PRK02888        356 LFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASM  435 (635)
T ss_pred             hhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecC
Confidence            11         001111123455678999998888888899999999764          12233233     3322212


Q ss_pred             EEEECcCCCeEEEec
Q psy14961        269 CLQVSPDGTAFSSGS  283 (320)
Q Consensus       269 ~i~~s~~~~~l~s~s  283 (320)
                      +=.-.|||++|++.-
T Consensus       436 g~t~~~dgk~l~~~n  450 (635)
T PRK02888        436 GETKEADGKWLVSLN  450 (635)
T ss_pred             CCcCCCCCCEEEEcc
Confidence            223368899888874

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.87  E-value=0.012  Score=52.39  Aligned_cols=255  Identities=14%  Similarity=0.171  Sum_probs=130.2

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc------c---------------c------------------cccc
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS------A---------------K------------------KKTV   61 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~------~---------------~------------------~~~~   61 (320)
                      .|+.+.|+++..-|+.|-..|.+-+|.........      .               .                  ..-+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            47788899887788888889999998764321110      0               0                  0001


Q ss_pred             cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee--ccc------CccceeEEEEee---CCCC---CEEEEE
Q psy14961         62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS--FHG------HTGELMDLDLAP---SETG---NTFVSG  127 (320)
Q Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~------~~~~v~~~~~~~---~~~~---~~l~s~  127 (320)
                      ....+.|++++.+ +=.+++.|..+|.+.|.|+.....+..  +..      ....+.++.|..   ..|+   -.+++|
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            1235788999886 456999999999999999987766543  111      223455666642   2233   478889


Q ss_pred             eCCCeEEEEeCC--C-CcEEEEeccCCccccCCC--eEEEEECcCCeeeeee----cCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        128 SSDKLVNIWDMR--T-GYCVQSFEGHHNLITDDK--LVNIWDMRTGYCVQSF----EGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       128 ~~dg~i~lwd~~--~-~~~~~~~~~~~~~~~~d~--~i~iwd~~~~~~~~~~----~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      ...|.+.+|.+.  . +.....+.+.. ...++.  .|...+..++......    .+-...+   ..   ..+++.+ .
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~-~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~---~i---~g~vVvv-S  233 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGAT-TNHDSPILSIIPINADTGESALATISAMQGLSKGI---SI---PGYVVVV-S  233 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE---SS----EEEEEETTT--B-B-BHHHHHGGGGT----------EEEEEE--
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeecc-ccCCCceEEEEEEECCCCCcccCchhHhhccccCC---Cc---CcEEEEE-c
Confidence            999999999763  1 11111111110 001111  2333444444322111    1111110   00   1134444 4


Q ss_pred             CCeEEEEECCCCeeEeEEecCcceeeeEEEEE-----ecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC----CceeE
Q psy14961        199 DATCRLFDLRADKEVACYKKDSILFGATSVDF-----SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE----NRVSC  269 (320)
Q Consensus       199 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~----~~i~~  269 (320)
                      +..++++.+...+...........  ...+.+     ...+..|++-..+|.+++|.+-..+.+....-+.    ..+..
T Consensus       234 e~~irv~~~~~~k~~~K~~~~~~~--~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~  311 (395)
T PF08596_consen  234 ESDIRVFKPPKSKGAHKSFDDPFL--CSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSS  311 (395)
T ss_dssp             SSEEEEE-TT---EEEEE-SS-EE--EEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT
T ss_pred             ccceEEEeCCCCcccceeeccccc--cceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccc
Confidence            678999998876654433322222  233334     2356678888899999999987777765554322    24567


Q ss_pred             EEECcCCCeEEEecCCC
Q psy14961        270 LQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D~  286 (320)
                      ..|+++|..++-.|..-
T Consensus       312 ssis~~Gdi~~~~gpsE  328 (395)
T PF08596_consen  312 SSISRNGDIFYWTGPSE  328 (395)
T ss_dssp             -EE-TTS-EEEE-SSSE
T ss_pred             cEECCCCCEEEEeCccc
Confidence            78899999887766543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>smart00320 WD40 WD40 repeats

Probab=97.85  E-value=6.4e-05  Score=41.85  Aligned_cols=38  Identities=39%  Similarity=0.699  Sum_probs=32.9

Q ss_pred             eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961        169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD  206 (320)
Q Consensus       169 ~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd  206 (320)
                      .+...+..|...|.+++|+|.+..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34555667888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG3617|consensus

Probab=97.83  E-value=3.8e-05  Score=71.52  Aligned_cols=108  Identities=17%  Similarity=0.103  Sum_probs=85.6

Q ss_pred             EEEEcCCCCEEEEee----CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961        183 SVKFHPSGDAVATGS----DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN  258 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~  258 (320)
                      -.+|||....|+.++    ..|.+.||- +++++......   .+.++++.|+|..-.|+.|.+.|.+.+|.....+.-.
T Consensus        20 i~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~---P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht   95 (1416)
T KOG3617|consen   20 ISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY---PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT   95 (1416)
T ss_pred             ccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc---ceehhhhccChHHHHHhhccccceeEEEecCCceeee
Confidence            367899888887665    468888884 45554322111   1235679999999999999999999999877765555


Q ss_pred             EeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        259 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       259 ~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ....|..+|..+.|||+|..|+|+..-|.+..|...
T Consensus        96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            567899999999999999999999999999999865

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.82  E-value=0.021  Score=52.83  Aligned_cols=253  Identities=14%  Similarity=0.129  Sum_probs=129.9

Q ss_pred             CCEEEEecCCCeEEEEEecccCCccccccccc--ccccCeEE--EEecCCCCEEEEEeCCCeEEEEECCCcceeeecccC
Q psy14961         31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISC--CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGH  106 (320)
Q Consensus        31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~--~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  106 (320)
                      +..++.++.++.+...|....+..........  .....+..  +... ++..++.++.++.|..+|.++++.+..+...
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            34566677788888887643322211100000  00001100  1111 2268888889999999999999988766532


Q ss_pred             ccc--eeEEEEeeCCCCCEEEEEe---------CCCeEEEEeCCCCcEEEEeccCC------------------------
Q psy14961        107 TGE--LMDLDLAPSETGNTFVSGS---------SDKLVNIWDMRTGYCVQSFEGHH------------------------  151 (320)
Q Consensus       107 ~~~--v~~~~~~~~~~~~~l~s~~---------~dg~i~lwd~~~~~~~~~~~~~~------------------------  151 (320)
                      ...  -..+.-.|.-.+..++.++         .++.+..+|..+|+.+..++...                        
T Consensus       140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw  219 (488)
T cd00216         140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW  219 (488)
T ss_pred             CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence            221  0001111111124555554         36788889998887665543210                        


Q ss_pred             ---------cc--c-cCC------------------CeEEEEECcCCeeeeeecC--CCC---Ce-EEEEEc----CCCC
Q psy14961        152 ---------NL--I-TDD------------------KLVNIWDMRTGYCVQSFEG--HQS---DV-NSVKFH----PSGD  191 (320)
Q Consensus       152 ---------~~--~-~~d------------------~~i~iwd~~~~~~~~~~~~--~~~---~v-~~v~~~----p~g~  191 (320)
                               ..  + +.+                  +.+.-+|.++++..-..+.  |..   .. ....+.    -+|.
T Consensus       220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~  299 (488)
T cd00216         220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGK  299 (488)
T ss_pred             CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCC
Confidence                     00  0 112                  2577778888877655431  110   00 001111    1233


Q ss_pred             ---EEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE------------------eCCCeEEEEc
Q psy14961        192 ---AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG------------------YNDYTINVWD  250 (320)
Q Consensus       192 ---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g------------------~~dg~v~~wd  250 (320)
                         .++.++.+|.+.-.|..+++.+-.++...     ..+..+|  ..++.+                  ..+|.+.-.|
T Consensus       300 ~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~-----~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD  372 (488)
T cd00216         300 PVPAIVHAPKNGFFYVLDRTTGKLISARPEVE-----QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALD  372 (488)
T ss_pred             eeEEEEEECCCceEEEEECCCCcEeeEeEeec-----cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEe
Confidence               57788899999999999998765443210     1122233  222222                  1346676777


Q ss_pred             CCCCeEEEEeecC--C------Cce--eEEEECcCCCeEEEecCCCceEeeec
Q psy14961        251 SLKCCRVNHLMGH--E------NRV--SCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       251 ~~~~~~~~~~~~h--~------~~i--~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +.+++.+=+....  .      .+.  ..++.  .+..++.++.|+.++..+.
T Consensus       373 ~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~  423 (488)
T cd00216         373 PKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDA  423 (488)
T ss_pred             CCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEEC
Confidence            7666544222111  0      111  11222  4467888889999997775

The alignment model contains an 8-bladed beta-propeller.

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.82  E-value=0.014  Score=48.67  Aligned_cols=191  Identities=14%  Similarity=0.086  Sum_probs=111.3

Q ss_pred             EEecC-CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc
Q psy14961         71 CIFPN-SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG  149 (320)
Q Consensus        71 ~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~  149 (320)
                      ..|.+ ++.++++--..+.|..|+..++.... +... . ...+.+.. ++ ..++.+...+ +.++|..+++.......
T Consensus         5 p~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~-~-~~G~~~~~-~~-g~l~v~~~~~-~~~~d~~~g~~~~~~~~   78 (246)
T PF08450_consen    5 PVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLP-G-PNGMAFDR-PD-GRLYVADSGG-IAVVDPDTGKVTVLADL   78 (246)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESS-S-EEEEEEEC-TT-SEEEEEETTC-EEEEETTTTEEEEEEEE
T ss_pred             eEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecC-C-CceEEEEc-cC-CEEEEEEcCc-eEEEecCCCcEEEEeec
Confidence            45655 44445555568899999998776533 2211 1 44455542 34 4566666554 45558877643322110


Q ss_pred             CCccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCC--------CeEEEEECCCCeeEeEEecCc
Q psy14961        150 HHNLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDD--------ATCRLFDLRADKEVACYKKDS  220 (320)
Q Consensus       150 ~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~  220 (320)
                                      ..       .. .....+.+++.|+|+..++....        |.+..++.. ++.......  
T Consensus        79 ----------------~~-------~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~--  132 (246)
T PF08450_consen   79 ----------------PD-------GGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG--  132 (246)
T ss_dssp             ----------------ET-------TCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE--
T ss_pred             ----------------cC-------CCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC--
Confidence                            00       01 22356889999999977776543        557777766 443222222  


Q ss_pred             ceeeeEEEEEecCCcEEEE-EeCCCeEEEEcCCC--C-----eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        221 ILFGATSVDFSVSGRLLFA-GYNDYTINVWDSLK--C-----CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~-g~~dg~v~~wd~~~--~-----~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                       ......++|+|+++.|+. -+..+.|..++...  .     +....+..-.+..-.+++.++|++.++.-..+.|.+++
T Consensus       133 -~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~  211 (246)
T PF08450_consen  133 -LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFD  211 (246)
T ss_dssp             -ESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEE
T ss_pred             -cccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEEC
Confidence             223568999999997764 45678888887642  2     11111222223478999999999888877778888887


Q ss_pred             cc
Q psy14961        293 SK  294 (320)
Q Consensus       293 ~~  294 (320)
                      -.
T Consensus       212 p~  213 (246)
T PF08450_consen  212 PD  213 (246)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG3621|consensus

Probab=97.81  E-value=0.00011  Score=67.17  Aligned_cols=117  Identities=19%  Similarity=0.163  Sum_probs=84.4

Q ss_pred             CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE-
Q psy14961        178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR-  256 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~-  256 (320)
                      ...|.-=+++..+++++.|+.-|.+.+++-..++... ++............+|++..++|.|+..|.|.++......+ 
T Consensus        33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~-~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRK-LKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             cceEEEEEeecCCceEEEecccceEEEEecCchhhhc-ccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            3344445566678999999999999999966655432 22211112234567889999999999999999998665322 


Q ss_pred             ----EEEe-ecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        257 ----VNHL-MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       257 ----~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                          ++.+ ..|...|++++|++|+..|.+|..-|+|-.-....
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence                1112 24788999999999999999999999988666543

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.80  E-value=0.00077  Score=64.32  Aligned_cols=133  Identities=19%  Similarity=0.186  Sum_probs=85.2

Q ss_pred             CCeEEEEECcCCeeeeeecCCCCC-eEEEEEcCC-------CCEEEEeeCCCeEEEEECCCCe-eEeE--EecCcceeee
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSD-VNSVKFHPS-------GDAVATGSDDATCRLFDLRADK-EVAC--YKKDSILFGA  225 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~-v~~v~~~p~-------g~~l~s~s~dg~i~iwd~~~~~-~~~~--~~~~~~~~~~  225 (320)
                      ...++-.|+..|+.+..+..|... |.  .+.|+       ...-+.|-.++.+..||.|-.. .+..  ..........
T Consensus       503 ~~~ly~mDLe~GKVV~eW~~~~~~~v~--~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F  580 (794)
T PF08553_consen  503 PNKLYKMDLERGKVVEEWKVHDDIPVV--DIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF  580 (794)
T ss_pred             CCceEEEecCCCcEEEEeecCCCccee--EecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence            456777799999999998877644 54  44443       2334556677889999988543 1111  1111111123


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++++-+.+| +||+|+.+|.|++||....+-...+.+-.++|.+|..+.||++++.. .+..+-+.++
T Consensus       581 s~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaT-c~tyLlLi~t  646 (794)
T PF08553_consen  581 SCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILAT-CKTYLLLIDT  646 (794)
T ss_pred             eEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEe-ecceEEEEEE
Confidence            444444444 89999999999999954433233445668899999999999997744 3455555553

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG1920|consensus

Probab=97.76  E-value=0.018  Score=56.43  Aligned_cols=218  Identities=11%  Similarity=0.165  Sum_probs=112.8

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      .|.++.|.-+++.|+.+...|.|.+-|.....     ......-...|.+..|+++++.++..+.++++.+-+- +..++
T Consensus        70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~-----~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~-~f~~i  143 (1265)
T KOG1920|consen   70 EIVSVQFLADTNSICVITALGDIILVDPETLE-----LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTK-DFEPI  143 (1265)
T ss_pred             ceEEEEEecccceEEEEecCCcEEEEcccccc-----eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec-cccch
Confidence            67888888888888888889999888653211     1122234578999999999999888887777775331 11111


Q ss_pred             eeccc-----CccceeEEEEeeCCCCCEEEEEe--------------CCCeEEEEeCCCCcEEEEeccCCccc-------
Q psy14961        101 QSFHG-----HTGELMDLDLAPSETGNTFVSGS--------------SDKLVNIWDMRTGYCVQSFEGHHNLI-------  154 (320)
Q Consensus       101 ~~~~~-----~~~~v~~~~~~~~~~~~~l~s~~--------------~dg~i~lwd~~~~~~~~~~~~~~~~~-------  154 (320)
                      ...+-     ..+....+.|.-.   ..-+-|+              .++.+   +..+.+...++.+....+       
T Consensus       144 ~E~~L~~d~~~~sk~v~VGwGrk---eTqfrgs~gr~~~~~~~~~ek~~~~~---~~~~~~~~IsWRgDg~~fAVs~~~~  217 (1265)
T KOG1920|consen  144 AEKPLDADDERKSKFVNVGWGRK---ETQFRGSEGRQAARQKIEKEKALEQI---EQDDHKTSISWRGDGEYFAVSFVES  217 (1265)
T ss_pred             hccccccccccccccceeccccc---ceeeecchhhhcccccccccccccch---hhccCCceEEEccCCcEEEEEEEec
Confidence            10000     0000001111000   0000000              00000   001111112222222111       


Q ss_pred             -cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCCee---EeEEecCcceeeeEE
Q psy14961        155 -TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRADKE---VACYKKDSILFGATS  227 (320)
Q Consensus       155 -~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~  227 (320)
                       ++.+.+++||-+ +..-..-+.-...=.+++|-|.|..+++-.   .|+.|.++.-+.-+.   ...++.+.  ..+..
T Consensus       218 ~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de--~~ve~  294 (1265)
T KOG1920|consen  218 ETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDE--KEVEE  294 (1265)
T ss_pred             cCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccc--cchhe
Confidence             112567777654 322111111122235799999999888753   456788887443211   11111111  12678


Q ss_pred             EEEecCCcEEEE---EeCCCeEEEEcCCC
Q psy14961        228 VDFSVSGRLLFA---GYNDYTINVWDSLK  253 (320)
Q Consensus       228 ~~~s~~~~~l~~---g~~dg~v~~wd~~~  253 (320)
                      ++|+.++..||+   ......|.+|-..+
T Consensus       295 L~Wns~sdiLAv~~~~~e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  295 LAWNSNSDILAVVTSNLENSLVQLWTTGN  323 (1265)
T ss_pred             eeecCCCCceeeeecccccceEEEEEecC
Confidence            999999999998   44555699997655

>KOG2395|consensus

Probab=97.70  E-value=0.00059  Score=60.70  Aligned_cols=132  Identities=17%  Similarity=0.192  Sum_probs=82.4

Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC--E-----EEEeeCCCeEEEEECCCCee--EeEE--ecCcceeeeEE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD--A-----VATGSDDATCRLFDLRADKE--VACY--KKDSILFGATS  227 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~--~-----l~s~s~dg~i~iwd~~~~~~--~~~~--~~~~~~~~~~~  227 (320)
                      .++--|++.|+.+..++-+.. |+-+.+.|+.+  .     -+.|=.|+.|.-||.+-...  +..-  ..........+
T Consensus       357 ~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc  435 (644)
T KOG2395|consen  357 KLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSC  435 (644)
T ss_pred             cceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccce
Confidence            455567778887777776654 77777777643  1     23345677888899873222  1111  11111011122


Q ss_pred             EEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        228 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       228 ~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+-. ...++|+|+.+|.|++||....+-...+.+-..+|..|..+.||++++ |..+.++-+-++
T Consensus       436 ~aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil-~Tc~tyLlLi~t  499 (644)
T KOG2395|consen  436 FATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWIL-ATCKTYLLLIDT  499 (644)
T ss_pred             eeec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEE-EecccEEEEEEE
Confidence            2222 334899999999999999633333344667788999999999999866 455666666664

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.66  E-value=0.049  Score=50.41  Aligned_cols=268  Identities=15%  Similarity=0.133  Sum_probs=140.2

Q ss_pred             CEEEEecCCCeEEEEEecccCCcccccccccccc---cCeEE-EEecCCCCEEEEEe---------CCCeEEEEECCCcc
Q psy14961         32 SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT---SFISC-CIFPNSDQQILTGS---------GDCTCALWDVESSQ   98 (320)
Q Consensus        32 ~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~---~~v~~-~~~~~~~~~l~s~~---------~dg~v~iwd~~~~~   98 (320)
                      ..++.++.++.+..+|....+.....  ....+.   ..+.+ ..+.  +..++.++         .++.+..+|.++++
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~--~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~  186 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKF--GNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGK  186 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeee--cCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCc
Confidence            56777778888888886533221111  011110   00111 1111  24455554         36788999999998


Q ss_pred             eeeecccCcc--------------------ceeEEEEeeCCCCCEEEEEeCCC------------------eEEEEeCCC
Q psy14961         99 LLQSFHGHTG--------------------ELMDLDLAPSETGNTFVSGSSDK------------------LVNIWDMRT  140 (320)
Q Consensus        99 ~~~~~~~~~~--------------------~v~~~~~~~~~~~~~l~s~~~dg------------------~i~lwd~~~  140 (320)
                      .+..++....                    .++. ..+.++.+..++.++.++                  .|.-+|+.+
T Consensus       187 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~-~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~t  265 (488)
T cd00216         187 LLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWA-SPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADT  265 (488)
T ss_pred             eeeEeeccCCCcCCCCCCCCCcceecCCCCCccC-CeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCC
Confidence            8776543211                    0110 011122346788887665                  688899999


Q ss_pred             CcEEEEeccCCc--------------------------c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCE
Q psy14961        141 GYCVQSFEGHHN--------------------------L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDA  192 (320)
Q Consensus       141 ~~~~~~~~~~~~--------------------------~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~  192 (320)
                      |+..-.++....                          +  .+.++.+...|.++++.+-.....   ...++.+|  ..
T Consensus       266 G~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~  340 (488)
T cd00216         266 GKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GL  340 (488)
T ss_pred             CCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ce
Confidence            887665431100                          0  123566777888888776554211   11233444  22


Q ss_pred             EEEe------------------eCCCeEEEEECCCCeeEeEEecCc---------ceeeeEEEEEecCCcEEEEEeCCCe
Q psy14961        193 VATG------------------SDDATCRLFDLRADKEVACYKKDS---------ILFGATSVDFSVSGRLLFAGYNDYT  245 (320)
Q Consensus       193 l~s~------------------s~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~s~~~~~l~~g~~dg~  245 (320)
                      ++.+                  ..+|.+.-.|+.+++.+-......         ... ...+  ...+..+++|+.+|.
T Consensus       341 vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~-~~~~--~~~g~~v~~g~~dG~  417 (488)
T cd00216         341 VYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHW-GGSL--ATAGNLVFAGAADGY  417 (488)
T ss_pred             EEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCccc-Ccce--EecCCeEEEECCCCe
Confidence            3222                  235778888888877654333220         000 0111  125678889999999


Q ss_pred             EEEEcCCCCeEEEEeecCCCce--eEEEECcCCCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEEE
Q psy14961        246 INVWDSLKCCRVNHLMGHENRV--SCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVY  316 (320)
Q Consensus       246 v~~wd~~~~~~~~~~~~h~~~i--~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (320)
                      +..+|..+++.+-+..- ...+  .=+.+..+|++ ..+..++-=++......+.+++  -+-+.|-+.|.+.
T Consensus       418 l~ald~~tG~~lW~~~~-~~~~~a~P~~~~~~g~~-yv~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  486 (488)
T cd00216         418 FRAFDATTGKELWKFRT-PSGIQATPMTYEVNGKQ-YVGVMVGGGGSFPTGMGGVAKL--DRWTAMGGYIIAF  486 (488)
T ss_pred             EEEEECCCCceeeEEEC-CCCceEcCEEEEeCCEE-EEEEEecCCccccccccccchh--cccCCCCCEEEEE
Confidence            99999999887755432 2222  22334446643 3344445433333333344442  1344566666654

The alignment model contains an 8-bladed beta-propeller.

>KOG4640|consensus

Probab=97.65  E-value=0.00032  Score=63.51  Aligned_cols=94  Identities=19%  Similarity=0.225  Sum_probs=72.7

Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN  258 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~  258 (320)
                      ..|.-+.|+|.-+.+|.+..+|.+.+..++ .+.+..++.+..... .+++|.|||+.||.|..||+|++-|..++..+.
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~-~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~   98 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVT-ASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV   98 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccc-eeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence            357789999999999999999999888877 444444442222222 589999999999999999999999999887776


Q ss_pred             Ee-ecCCCceeEEEECc
Q psy14961        259 HL-MGHENRVSCLQVSP  274 (320)
Q Consensus       259 ~~-~~h~~~i~~i~~s~  274 (320)
                      .+ ......|+++-|++
T Consensus        99 ~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   99 SFLFSVETDISKGIWDR  115 (665)
T ss_pred             ccccccccchheeeccc
Confidence            53 23456788888874

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.57  E-value=0.058  Score=48.91  Aligned_cols=219  Identities=13%  Similarity=0.112  Sum_probs=103.9

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ..+...+.++|+|++++.+ .||...+|...    . ....    ..+.-....|.+ .+.+++-...++|.|+.--...
T Consensus        32 ~~~p~~ls~npngr~v~V~-g~geY~iyt~~----~-~r~k----~~G~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~~  100 (443)
T PF04053_consen   32 EIYPQSLSHNPNGRFVLVC-GDGEYEIYTAL----A-WRNK----AFGSGLSFVWSS-RNRYAVLESSSTIKIYKNFKNE  100 (443)
T ss_dssp             SS--SEEEE-TTSSEEEEE-ETTEEEEEETT----T-TEEE----EEEE-SEEEE-T-SSEEEEE-TTS-EEEEETTEE-
T ss_pred             CcCCeeEEECCCCCEEEEE-cCCEEEEEEcc----C-Cccc----ccCceeEEEEec-CccEEEEECCCeEEEEEcCccc
Confidence            3455789999999998884 57888888621    1 1111    112223455655 4457777778899996322222


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ  178 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~  178 (320)
                      ....++. ...+..+  ..   |..|+..+.+ .|.+||..+++.+..++                             -
T Consensus       101 ~~k~i~~-~~~~~~I--f~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~-----------------------------v  144 (443)
T PF04053_consen  101 VVKSIKL-PFSVEKI--FG---GNLLGVKSSD-FICFYDWETGKLIRRID-----------------------------V  144 (443)
T ss_dssp             TT------SS-EEEE--E----SSSEEEEETT-EEEEE-TTT--EEEEES-----------------------------S
T ss_pred             cceEEcC-CcccceE--Ec---CcEEEEECCC-CEEEEEhhHcceeeEEe-----------------------------c
Confidence            2222221 1122222  22   5555555444 78888887776655432                             1


Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC------------eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRAD------------KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTI  246 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v  246 (320)
                      .+|..+.|+++|++++..+.+ .+.+.+.+..            ..-...+..   ..+.+..|.-+  .++-.+.. .+
T Consensus       145 ~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~---~~IkSg~W~~d--~fiYtT~~-~l  217 (443)
T PF04053_consen  145 SAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEIS---ERIKSGCWVED--CFIYTTSN-HL  217 (443)
T ss_dssp             -E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE----S--SEEEEETT--EEEEE-TT-EE
T ss_pred             CCCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEec---ceeEEEEEEcC--EEEEEcCC-eE
Confidence            237889999999999988866 5777765432            111111101   12345666654  33333323 55


Q ss_pred             EEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        247 NVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       247 ~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +-+  ..+.. ..+..-+.++.=+.+.|..+.+.....|+.+..+...
T Consensus       218 kYl--~~Ge~-~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  218 KYL--VNGET-GIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELD  262 (443)
T ss_dssp             EEE--ETTEE-EEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred             EEE--EcCCc-ceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence            543  22211 1122224567777888877788888899988877643

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.57  E-value=0.034  Score=46.19  Aligned_cols=202  Identities=10%  Similarity=0.152  Sum_probs=104.8

Q ss_pred             ccccccCeEEEEecCCCCE-EEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         61 VATHTSFISCCIFPNSDQQ-ILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      +.+-...++.+.|.++.+. +++....+.|..++.+ ++.++.++... +..-.+++.  .++.++++.-.++.+.+.++
T Consensus        17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~--g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYL--GNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE---STTEEEEEETTTTEEEEEEE
T ss_pred             CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEE--CCCEEEEEEcCCCcEEEEEE
Confidence            3344455889999887654 5556677888888864 67776654332 345556553  34445554445777877776


Q ss_pred             CCCc-EEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC---CeeEe
Q psy14961        139 RTGY-CVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA---DKEVA  214 (320)
Q Consensus       139 ~~~~-~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~---~~~~~  214 (320)
                      .... .+..           ..+.-+++.      ....+...+-.++|+|.++.|+.+-+.....++.++.   ...+.
T Consensus        94 ~~~~~~~~~-----------~~~~~~~l~------~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~  156 (248)
T PF06977_consen   94 DDDTTSLDR-----------ADVQKISLG------FPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLF  156 (248)
T ss_dssp             ----TT--E-----------EEEEEEE---------S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--E
T ss_pred             eccccccch-----------hhceEEecc------cccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCcccee
Confidence            3211 0000           001111110      0112445678999999988888888777777877653   22221


Q ss_pred             EEec------CcceeeeEEEEEecC-CcEEEEEeCCCeEEEEcCCCCeEEEEe--ec--C-----CCceeEEEECcCCCe
Q psy14961        215 CYKK------DSILFGATSVDFSVS-GRLLFAGYNDYTINVWDSLKCCRVNHL--MG--H-----ENRVSCLQVSPDGTA  278 (320)
Q Consensus       215 ~~~~------~~~~~~~~~~~~s~~-~~~l~~g~~dg~v~~wd~~~~~~~~~~--~~--h-----~~~i~~i~~s~~~~~  278 (320)
                      ....      .......+++.++|. +.+++.+.++..+..+| ..++.+..+  .+  |     -..-..|+|.++|++
T Consensus       157 ~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~L  235 (248)
T PF06977_consen  157 VSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNL  235 (248)
T ss_dssp             EEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--E
T ss_pred             eccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCE
Confidence            1111      112234678889986 46777788889999999 455554433  22  1     135789999999988


Q ss_pred             EEEec
Q psy14961        279 FSSGS  283 (320)
Q Consensus       279 l~s~s  283 (320)
                      .+++-
T Consensus       236 YIvsE  240 (248)
T PF06977_consen  236 YIVSE  240 (248)
T ss_dssp             EEEET
T ss_pred             EEEcC
Confidence            77653

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG2444|consensus

Probab=97.53  E-value=0.00031  Score=55.96  Aligned_cols=174  Identities=8%  Similarity=0.062  Sum_probs=88.4

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      +.||+.+........-....|....-.-.-..+..-+.|+.++-+++....   ........|......   ..-+..++
T Consensus         1 ~~~dl~~~~~~~dk~~~~d~i~~~~t~~~~~~l~~~sa~~~v~~~~~~k~k---~s~rse~~~~e~~~v---~~~~~~~~   74 (238)
T KOG2444|consen    1 KEWDLGANNFGIDKHPSTDLIAAGLTDGHLHLLRATSADGLVRERKVRKHK---ESCRSERFIDEGQRV---VTASAKLM   74 (238)
T ss_pred             CcccccccccceeccchhhhhhhcchhhhhhhhccccCCcccccchhhhhh---hhhhhhhhhhcceee---cccCceEE
Confidence            368887555444333223334433222222345555677888777653211   111111222222111   12245799


Q ss_pred             EEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         82 TGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      .|+.+|.|.+|..+-. .....+..-...+. +-+..-.++.+..++++||.|+.|++.-++.+...             
T Consensus        75 vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~-~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~-------------  140 (238)
T KOG2444|consen   75 VGTSDGAVYVFNWNLEGAHSDRVCSGEESID-LGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV-------------  140 (238)
T ss_pred             eecccceEEEecCCccchHHHhhhcccccce-eccccccccceeEEeccCCceeeeccccCceeeee-------------
Confidence            9999999999987632 11111111112221 22222334567888999999999988665433221             


Q ss_pred             EEEECcCCeeeeeecCCC-CCeEEEEEcCCCCEEEEe--eCCCeEEEEECCC
Q psy14961        161 NIWDMRTGYCVQSFEGHQ-SDVNSVKFHPSGDAVATG--SDDATCRLFDLRA  209 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~-~~v~~v~~~p~g~~l~s~--s~dg~i~iwd~~~  209 (320)
                                    .+|. .++..+...-.++.++++  |.|..++.|++..
T Consensus       141 --------------g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  141 --------------GQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             --------------ccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence                          1233 233334444445556655  6677777777653

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.53  E-value=0.047  Score=46.94  Aligned_cols=261  Identities=12%  Similarity=0.121  Sum_probs=144.5

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccccc-c----c
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATH-T----S   66 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h-~----~   66 (320)
                      ++.|..+++.+..+..  .....+..+|+++.+.+++          +.--|.+||...-.  ......+... .    .
T Consensus        20 ~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~--~~~EI~iP~k~R~~~~~   95 (342)
T PF06433_consen   20 YVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLS--PTGEIEIPPKPRAQVVP   95 (342)
T ss_dssp             EEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTE--EEEEEEETTS-B--BS-
T ss_pred             EEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCc--ccceEecCCcchheecc
Confidence            4667777777766553  3445577899999888753          23458899874211  1111122211 1    1


Q ss_pred             CeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-CCcE
Q psy14961         67 FISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-TGYC  143 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-~~~~  143 (320)
                      ......++.++++++....  .-.|.+-|+..++.+..+.-..    |..+-|..+ ..|.+-|.||.+.-..+. .|+.
T Consensus        96 ~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG----C~~iyP~~~-~~F~~lC~DGsl~~v~Ld~~Gk~  170 (342)
T PF06433_consen   96 YKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG----CWLIYPSGN-RGFSMLCGDGSLLTVTLDADGKE  170 (342)
T ss_dssp             -GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS----EEEEEEEET-TEEEEEETTSCEEEEEETSTSSE
T ss_pred             cccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC----EEEEEecCC-CceEEEecCCceEEEEECCCCCE
Confidence            1123456777777766432  3578888888887776654221    122234432 468889999998877775 3443


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCe-EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE--Ee---
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDV-NSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC--YK---  217 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~--~~---  217 (320)
                      .....            .+++.           ...++ ..-++...+..++-.+-+|.|+--|+........  +.   
T Consensus       171 ~~~~t------------~~F~~-----------~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t  227 (342)
T PF06433_consen  171 AQKST------------KVFDP-----------DDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLT  227 (342)
T ss_dssp             EEEEE------------EESST-----------TTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-
T ss_pred             eEeec------------cccCC-----------CCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccC
Confidence            22110            11111           11111 1233444555555566777777777665432211  11   


Q ss_pred             -----cCcceeeeEEEEEecCCcEEEEEeC--------CC--eEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEE
Q psy14961        218 -----KDSILFGATSVDFSVSGRLLFAGYN--------DY--TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSS  281 (320)
Q Consensus       218 -----~~~~~~~~~~~~~s~~~~~l~~g~~--------dg--~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s  281 (320)
                           ......+-..+++++....|++--.        ++  .|-++|+.+++++..+.- ..++.+|+.+.|.+ +|..
T Consensus       228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~  306 (342)
T PF06433_consen  228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYA  306 (342)
T ss_dssp             HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEE
T ss_pred             ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEE
Confidence                 0111223345778876665555221        22  477779999999887652 34688999999766 5554


Q ss_pred             e-cCCCceEeeecch
Q psy14961        282 G-SWDTTLRDEESKN  295 (320)
Q Consensus       282 ~-s~D~~ir~~~~~~  295 (320)
                      . ..++.+.++|..+
T Consensus       307 ~~~~~~~l~v~D~~t  321 (342)
T PF06433_consen  307 LSAGDGTLDVYDAAT  321 (342)
T ss_dssp             EETTTTEEEEEETTT
T ss_pred             EcCCCCeEEEEeCcC
Confidence            4 4689999999654

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.52  E-value=0.049  Score=46.87  Aligned_cols=208  Identities=16%  Similarity=0.179  Sum_probs=114.5

Q ss_pred             eEeecccceeEEEEEeCcc-c------eEEEEEcCCCCEEEEe--cCCCeEEEEEecccCCcccccccccccccCeEEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPAT-W------VMACAYAPSGSVVASG--GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCI   72 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~-~------V~~~~~~~~~~~l~s~--~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~   72 (320)
                      -+||..|-.....+.+|.. .      ....+++.||++++..  +.--+|.|.|+...    ....++.   -+=+...
T Consensus        70 ~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~----kvv~ei~---~PGC~~i  142 (342)
T PF06433_consen   70 EIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAK----KVVGEID---TPGCWLI  142 (342)
T ss_dssp             EEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTT----EEEEEEE---GTSEEEE
T ss_pred             EEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCC----ceeeeec---CCCEEEE
Confidence            4899998887777777764 2      1235677788766653  34456777776421    1111111   1112334


Q ss_pred             ecCCCCEEEEEeCCCeEEEEECC-Ccceee----ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE---
Q psy14961         73 FPNSDQQILTGSGDCTCALWDVE-SSQLLQ----SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV---  144 (320)
Q Consensus        73 ~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~---  144 (320)
                      ++.....+.+-+.||.+.-..+. .|+...    .|.....++..-..- ...+..++-.+-+|.|+--|+......   
T Consensus       143 yP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~-~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~  221 (342)
T PF06433_consen  143 YPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAY-SRDGGRLYFVSYEGNVYSADLSGDSAKFGK  221 (342)
T ss_dssp             EEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EE-ETTTTEEEEEBTTSEEEEEEETTSSEEEEE
T ss_pred             EecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccce-ECCCCeEEEEecCCEEEEEeccCCcccccC
Confidence            44444568888889999988886 344332    122212222111000 122345555666777776666443211   


Q ss_pred             ---------------------EEeccCCccc-------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC
Q psy14961        145 ---------------------QSFEGHHNLI-------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG  190 (320)
Q Consensus       145 ---------------------~~~~~~~~~~-------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g  190 (320)
                                           ..++...+.+             .....|-++|+.+++.+..++. ..++.+|+.+.+.
T Consensus       222 ~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~  300 (342)
T PF06433_consen  222 PWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDD  300 (342)
T ss_dssp             EEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSS
T ss_pred             cccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCC
Confidence                                 1111000000             0123577789999999888763 2357799999876


Q ss_pred             C-EEEEe-eCCCeEEEEECCCCeeEeEEec
Q psy14961        191 D-AVATG-SDDATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       191 ~-~l~s~-s~dg~i~iwd~~~~~~~~~~~~  218 (320)
                      + .|++. ..++.+.+||..+++.+...+.
T Consensus       301 ~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~  330 (342)
T PF06433_consen  301 KPLLYALSAGDGTLDVYDAATGKLVRSIEQ  330 (342)
T ss_dssp             S-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred             CcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence            5 66554 4589999999999988765543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.49  E-value=0.0059  Score=56.56  Aligned_cols=106  Identities=15%  Similarity=0.066  Sum_probs=72.0

Q ss_pred             CCCEEEEeeCCCeEEEEECCC----C-eeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeE------
Q psy14961        189 SGDAVATGSDDATCRLFDLRA----D-KEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCR------  256 (320)
Q Consensus       189 ~g~~l~s~s~dg~i~iwd~~~----~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~------  256 (320)
                      +|++...  .++.|.+.|..+    + +.+..++-..   .+..+.++|||+++++++ .+.+|.+.|..+...      
T Consensus       287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK---sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~  361 (635)
T PRK02888        287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK---NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKI  361 (635)
T ss_pred             CCCEEEE--CCCEEEEEECCccccCCcceEEEEECCC---CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccC
Confidence            4554433  246788888776    2 2233232222   245688999999887765 588999999876432      


Q ss_pred             ------EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhh
Q psy14961        257 ------VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQY  300 (320)
Q Consensus       257 ------~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~  300 (320)
                            ..+..- ...-...+|.++|+.+.|---|..|-.|+.+.....|
T Consensus       362 ~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~  410 (635)
T PRK02888        362 KPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAY  410 (635)
T ss_pred             CccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHh
Confidence                  222221 3344678999999999999999999999998876554

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.45  E-value=0.01  Score=52.85  Aligned_cols=214  Identities=12%  Similarity=0.142  Sum_probs=99.3

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc-cccc--c-cccccCeEEEEec-----CCC---CEEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA-KKKT--V-ATHTSFISCCIFP-----NSD---QQILTG   83 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~-~~~~--~-~~h~~~v~~~~~~-----~~~---~~l~s~   83 (320)
                      .+....|++++.|.-| ++|.|..+|.+.|.|+..+.--.. ....  + ......++++.|.     .++   -.+++|
T Consensus        83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            3456789999998766 999999999999999842211000 0111  1 1234567777773     222   357889


Q ss_pred             eCCCeEEEEECCC---cceee----ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-e---c----
Q psy14961         84 SGDCTCALWDVES---SQLLQ----SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-F---E----  148 (320)
Q Consensus        84 ~~dg~v~iwd~~~---~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~---~----  148 (320)
                      .+.|.+.+|.+..   +....    ....+.+++..+..                    .|..++..... .   +    
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~--------------------i~~~~G~~a~At~~~~~~l~~  221 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIP--------------------INADTGESALATISAMQGLSK  221 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEE--------------------EETTT--B-B-BHHHHHGGGG
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEE--------------------EECCCCCcccCchhHhhcccc
Confidence            9999999997642   11111    11123333333321                    12222211000 0   0    


Q ss_pred             ----cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE-----cCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC
Q psy14961        149 ----GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF-----HPSGDAVATGSDDATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       149 ----~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~-----~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~  219 (320)
                          ....++..+..++++...+.+..............+.+     ...+..|++-..+|.++++.+..-+++......
T Consensus       222 g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~  301 (395)
T PF08596_consen  222 GISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP  301 (395)
T ss_dssp             T----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-S
T ss_pred             CCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCC
Confidence                00112344566666666555444333222122233444     234567888899999999999988877665543


Q ss_pred             cce--eeeEEEEEecCCcEEEEEeCC--CeEEEEc
Q psy14961        220 SIL--FGATSVDFSVSGRLLFAGYND--YTINVWD  250 (320)
Q Consensus       220 ~~~--~~~~~~~~s~~~~~l~~g~~d--g~v~~wd  250 (320)
                      ...  .......|+++|..++..+..  ..+.+|.
T Consensus       302 ~~~d~~~~~~ssis~~Gdi~~~~gpsE~~l~sv~~  336 (395)
T PF08596_consen  302 PPLDSRRLSSSSISRNGDIFYWTGPSEIQLFSVWG  336 (395)
T ss_dssp             S---HHHHTT-EE-TTS-EEEE-SSSEEEEEEEES
T ss_pred             CccccccccccEECCCCCEEEEeCcccEEEEEEEc
Confidence            211  112345678888877665433  2344454

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2444|consensus

Probab=97.45  E-value=0.00052  Score=54.68  Aligned_cols=103  Identities=16%  Similarity=0.148  Sum_probs=74.1

Q ss_pred             CCEEEEeeCCCeEEEEECCCCeeE---eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-C
Q psy14961        190 GDAVATGSDDATCRLFDLRADKEV---ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-N  265 (320)
Q Consensus       190 g~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-~  265 (320)
                      +..++.|+.+|.|.+|+.+.-...   .........   ..+.-..++.+..++..+|.|+.|.....+.+....+|. .
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~---~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~  146 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESID---LGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFE  146 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccce---eccccccccceeEEeccCCceeeeccccCceeeeeccccCC
Confidence            467999999999999987621110   000111111   112223456688889999999999998888888778888 6


Q ss_pred             ceeEEEECcCCCeEEEe--cCCCceEeeecch
Q psy14961        266 RVSCLQVSPDGTAFSSG--SWDTTLRDEESKN  295 (320)
Q Consensus       266 ~i~~i~~s~~~~~l~s~--s~D~~ir~~~~~~  295 (320)
                      ++..+..+..++.++++  |.|..++.|+.+.
T Consensus       147 ~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  147 SGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             CcceeEEecCCceEEeeccccchhhhhcchhh
Confidence            88888888888899999  9999999999743

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.40  E-value=0.054  Score=47.17  Aligned_cols=199  Identities=13%  Similarity=0.173  Sum_probs=108.5

Q ss_pred             eEEEEECCCcceeeecccC-ccceeEEEEee-CC----CCCEEEEEeC----------CCeEEEEeCCCC----cEEE--
Q psy14961         88 TCALWDVESSQLLQSFHGH-TGELMDLDLAP-SE----TGNTFVSGSS----------DKLVNIWDMRTG----YCVQ--  145 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~-~~----~~~~l~s~~~----------dg~i~lwd~~~~----~~~~--  145 (320)
                      .|++.|..+...+..+.-. .+.+.+++... ..    ...+|+.|+.          .|.|.++++...    ..+.  
T Consensus         3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i   82 (321)
T PF03178_consen    3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI   82 (321)
T ss_dssp             EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred             EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence            5777777766655444322 23344443322 11    1356665542          288999998773    1111  


Q ss_pred             -------------EeccCCccccCCCeEEEEECcCCe-eeeee-cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC-
Q psy14961        146 -------------SFEGHHNLITDDKLVNIWDMRTGY-CVQSF-EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA-  209 (320)
Q Consensus       146 -------------~~~~~~~~~~~d~~i~iwd~~~~~-~~~~~-~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-  209 (320)
                                   .+.+. -++...+.+.+|++.... ....- ......+.++...  +++++.|.....+.++..+. 
T Consensus        83 ~~~~~~g~V~ai~~~~~~-lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~  159 (321)
T PF03178_consen   83 HSTEVKGPVTAICSFNGR-LVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEE  159 (321)
T ss_dssp             EEEEESS-EEEEEEETTE-EEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETT
T ss_pred             EEEeecCcceEhhhhCCE-EEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEcc
Confidence                         11111 233456788999887766 33221 1122356666665  56888888878888875543 


Q ss_pred             CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-------C--eEEEEee-cCCCceeEE---EECcC-
Q psy14961        210 DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-------C--CRVNHLM-GHENRVSCL---QVSPD-  275 (320)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-------~--~~~~~~~-~h~~~i~~i---~~s~~-  275 (320)
                      +..+.....+.....+.++.|-+++..++++..+|.+.++....       .  ....... ...+.|+++   .+.|. 
T Consensus       160 ~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~  239 (321)
T PF03178_consen  160 NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRS  239 (321)
T ss_dssp             TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--S
T ss_pred             CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecC
Confidence            33333333433344567788886777999999999999986431       1  2221122 224567887   65562 


Q ss_pred             -CC------eEEEecCCCceE
Q psy14961        276 -GT------AFSSGSWDTTLR  289 (320)
Q Consensus       276 -~~------~l~s~s~D~~ir  289 (320)
                       +.      .++-++.+|.|-
T Consensus       240 ~~~~~~~~~~i~~~T~~G~Ig  260 (321)
T PF03178_consen  240 GSSESPNRPQILYGTVDGSIG  260 (321)
T ss_dssp             SSS-TTEEEEEEEEETTS-EE
T ss_pred             CCCcccccceEEEEecCCEEE
Confidence             22      377788899987

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.39  E-value=0.016  Score=52.31  Aligned_cols=184  Identities=14%  Similarity=0.104  Sum_probs=96.7

Q ss_pred             CeEEEEecCCCCEEEEE---eCC-CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeE--EEEeCC
Q psy14961         67 FISCCIFPNSDQQILTG---SGD-CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLV--NIWDMR  139 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~---~~d-g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i--~lwd~~  139 (320)
                      .+..-.|+++++.++--   ... ..+.++++++++...... ..+..  ....++|+|++|+ +...||..  .+.|+.
T Consensus       194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~--~~P~fspDG~~l~f~~~rdg~~~iy~~dl~  270 (425)
T COG0823         194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNN--GAPAFSPDGSKLAFSSSRDGSPDIYLMDLD  270 (425)
T ss_pred             ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCcc--CCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence            34445677777654422   222 358889998876543332 11111  1223356777766 55566654  444554


Q ss_pred             CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCe--EEEEECCCCeeEeEE
Q psy14961        140 TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDAT--CRLFDLRADKEVACY  216 (320)
Q Consensus       140 ~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~--i~iwd~~~~~~~~~~  216 (320)
                      .+...+ +                        ....+..   ..=.|+|+|++++-.+ ..|.  |.+.|...+... ..
T Consensus       271 ~~~~~~-L------------------------t~~~gi~---~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~-ri  321 (425)
T COG0823         271 GKNLPR-L------------------------TNGFGIN---TSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT-RL  321 (425)
T ss_pred             CCccee-c------------------------ccCCccc---cCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee-Ee
Confidence            433110 1                        0001111   1457899999886554 5565  555566554432 22


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeC-CCe--EEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYN-DYT--INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~--v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      ......  -..-.++|||++|+..+. +|.  |.+.|..+.... +...+......-.|.||++++...+.-
T Consensus       322 T~~~~~--~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~-~~lt~~~~~e~ps~~~ng~~i~~~s~~  390 (425)
T COG0823         322 TFSGGG--NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKI-RILTSTYLNESPSWAPNGRMIMFSSGQ  390 (425)
T ss_pred             eccCCC--CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcE-EEccccccCCCCCcCCCCceEEEeccC
Confidence            221111  114558999999887763 344  566666554432 233344445566778888877665543

>KOG3621|consensus

Probab=97.36  E-value=0.0031  Score=58.03  Aligned_cols=140  Identities=15%  Similarity=0.155  Sum_probs=93.8

Q ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee
Q psy14961        118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS  197 (320)
Q Consensus       118 ~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s  197 (320)
                      +..+++++.|+.-|.+.+|+-..++....                          ...+-...+.....|++..++|+|+
T Consensus        42 dst~~~l~~GsS~G~lyl~~R~~~~~~~~--------------------------~~~~~~~~~~~~~vs~~e~lvAagt   95 (726)
T KOG3621|consen   42 DATEEYLAMGSSAGSVYLYNRHTGEMRKL--------------------------KNEGATGITCVRSVSSVEYLVAAGT   95 (726)
T ss_pred             ecCCceEEEecccceEEEEecCchhhhcc--------------------------cccCccceEEEEEecchhHhhhhhc
Confidence            44578999999999999999766543211                          1111233456778899888899999


Q ss_pred             CCCeEEEEECCCCee--EeEEecCc--ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeE
Q psy14961        198 DDATCRLFDLRADKE--VACYKKDS--ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSC  269 (320)
Q Consensus       198 ~dg~i~iwd~~~~~~--~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~  269 (320)
                      ..|.|.++.++...+  ........  ....++++.|++++..+++|...|+|.+-.+...    .....+..-..+|-.
T Consensus        96 ~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQ  175 (726)
T KOG3621|consen   96 ASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQ  175 (726)
T ss_pred             CCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEE
Confidence            999999998765322  11111111  1345789999999999999999999998765441    122334445678888


Q ss_pred             EEECcCCCeEEEecC
Q psy14961        270 LQVSPDGTAFSSGSW  284 (320)
Q Consensus       270 i~~s~~~~~l~s~s~  284 (320)
                      |.... +.+|++...
T Consensus       176 lD~~q-~~LLVStl~  189 (726)
T KOG3621|consen  176 LDYLQ-SYLLVSTLT  189 (726)
T ss_pred             eeccc-ceehHhhhh
Confidence            88654 445554443

>KOG1645|consensus

Probab=97.33  E-value=0.00095  Score=57.35  Aligned_cols=92  Identities=17%  Similarity=0.227  Sum_probs=73.4

Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC-cEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG-RLL  237 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l  237 (320)
                      +++.+..+.+..+.+.+|...|..++|+|..+ .+..++.+.+|+|.|+.+...+..+.....   +.+++|..+. .+|
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~---~wSC~wDlde~h~I  251 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQ---IWSCCWDLDERHVI  251 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCC---ceeeeeccCCccee
Confidence            66666666666667788888999999999877 578899999999999998877766655533   4678888765 478


Q ss_pred             EEEeCCCeEEEEcCCCC
Q psy14961        238 FAGYNDYTINVWDSLKC  254 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~  254 (320)
                      +.|-..|.|.+||+...
T Consensus       252 YaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  252 YAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             EEeccCceEEEEEccCC
Confidence            88889999999998653

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.31  E-value=0.03  Score=39.77  Aligned_cols=106  Identities=17%  Similarity=0.169  Sum_probs=61.6

Q ss_pred             eeEEEEeeC-CC-CCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc
Q psy14961        110 LMDLDLAPS-ET-GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH  187 (320)
Q Consensus       110 v~~~~~~~~-~~-~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~  187 (320)
                      |.+++++.. .+ .+.|+.|+.|..||+|+-.  ..+..+                           . -...|.+++-.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei---------------------------~-e~~~v~~L~~~   51 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEI---------------------------T-ETDKVTSLCSL   51 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEE---------------------------e-cccceEEEEEc
Confidence            455665532 12 2689999999999999732  222221                           1 23356667666


Q ss_pred             CCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEE
Q psy14961        188 PSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINV  248 (320)
Q Consensus       188 p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~  248 (320)
                      .. ..|+.+-++|+|-+|+-.. +.- ..+............+.-||. -|++|.++|.|-+
T Consensus        52 ~~-~~F~Y~l~NGTVGvY~~~~-RlW-RiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   52 GG-GRFAYALANGTVGVYDRSQ-RLW-RIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             CC-CEEEEEecCCEEEEEeCcc-eee-eeccCCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence            65 5688899999999997422 221 112222222233333334443 6899999998753

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.30  E-value=0.027  Score=39.99  Aligned_cols=102  Identities=13%  Similarity=0.157  Sum_probs=61.7

Q ss_pred             eEEEEEcC---CC-CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         22 VMACAYAP---SG-SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        22 V~~~~~~~---~~-~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      |+++++..   || +-|+.|+.|..|++|+-+      ....++..+ +.|.++..... +.++.+..+|+|-+|+-...
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~------e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD------EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRSQR   73 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC------cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCcce
Confidence            56666543   33 589999999999999632      222333333 45666665543 67888999999999985322


Q ss_pred             ceeeecccCccceeEEEEe-eCCCC-CEEEEEeCCCeEE
Q psy14961         98 QLLQSFHGHTGELMDLDLA-PSETG-NTFVSGSSDKLVN  134 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~-~~~~~-~~l~s~~~dg~i~  134 (320)
                        +...+. +..+.++.+. ...+| .-|++|-.+|.|-
T Consensus        74 --lWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 --LWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             --eeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence              233332 2335555433 22222 2578888888763

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.22  E-value=0.12  Score=44.95  Aligned_cols=175  Identities=13%  Similarity=0.146  Sum_probs=96.8

Q ss_pred             eEeecccceeEEEEEeC-ccceEEEE---EcCC----CCEEEEecC----------CCeEEEEEecccCCcccccc--cc
Q psy14961          2 IIWDGLTQTKEHSVTMP-ATWVMACA---YAPS----GSVVASGGL----------DNKVTVYAIALEDDSSAKKK--TV   61 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~-~~~V~~~~---~~~~----~~~l~s~~~----------dg~i~v~~~~~~~~~~~~~~--~~   61 (320)
                      +|-|..+.+....+.++ .+.+.+++   |..+    ..+|+.|..          .|.|.+|++...........  ..
T Consensus         5 ~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~   84 (321)
T PF03178_consen    5 RLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHS   84 (321)
T ss_dssp             EEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEE
T ss_pred             EEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEE
Confidence            46677766666666543 44555544   4432    467776632          28899998864211001111  11


Q ss_pred             cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-eeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-LLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      ....++|+++..-  +..++++. ++.|.+|++...+ ....-. .....+.++..  .  +++++.|.....+.++...
T Consensus        85 ~~~~g~V~ai~~~--~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~--~~~I~vgD~~~sv~~~~~~  157 (321)
T PF03178_consen   85 TEVKGPVTAICSF--NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--F--KNYILVGDAMKSVSLLRYD  157 (321)
T ss_dssp             EEESS-EEEEEEE--TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--E--TTEEEEEESSSSEEEEEEE
T ss_pred             EeecCcceEhhhh--CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEec--c--ccEEEEEEcccCEEEEEEE
Confidence            2346788887654  33555554 5799999998776 433221 12223444433  2  5688888887777766432


Q ss_pred             C-CcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC
Q psy14961        140 T-GYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR  208 (320)
Q Consensus       140 ~-~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~  208 (320)
                      . +..+..+                        .. ......+.++.+-++++.++.+..+|.+.++..+
T Consensus       158 ~~~~~l~~v------------------------a~-d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  158 EENNKLILV------------------------AR-DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             TTTE-EEEE------------------------EE-ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             ccCCEEEEE------------------------Ee-cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            2 1111110                        00 1123357888888777789999999999999775

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.19  E-value=0.098  Score=47.18  Aligned_cols=62  Identities=18%  Similarity=0.079  Sum_probs=40.4

Q ss_pred             EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++.+....+....++.+.+-+......    ....+++..|++||+++.+|--..+|.+.+..+..
T Consensus       186 l~~~~~~~i~~~~g~~i~~i~~~~~~~----i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf  247 (410)
T PF04841_consen  186 LSSDRVVEILLANGETIYIIDENSFKQ----IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDF  247 (410)
T ss_pred             eecCcceEEEEecCCEEEEEEcccccc----ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcc
Confidence            444555555555555566433222111    22246899999999999999999999998887533

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG1008|consensus

Probab=97.12  E-value=0.00014  Score=65.93  Aligned_cols=164  Identities=20%  Similarity=0.290  Sum_probs=105.1

Q ss_pred             CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEee---
Q psy14961        122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGS---  197 (320)
Q Consensus       122 ~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s---  197 (320)
                      ..++.|..+|.|-+-..+...-              .           -....++|....++++|++- .+.||+|-   
T Consensus        71 cIlavG~atG~I~l~s~r~~hd--------------S-----------s~E~tp~~ar~Ct~lAwneLDtn~LAagldkh  125 (783)
T KOG1008|consen   71 CILAVGSATGNISLLSVRHPHD--------------S-----------SAEVTPGYARPCTSLAWNELDTNHLAAGLDKH  125 (783)
T ss_pred             hhhhhccccCceEEeecCCccc--------------c-----------cceecccccccccccccccccHHHHHhhhhhh
Confidence            4566777788887766543210              0           01224567788999999984 45666663   


Q ss_pred             -CCCeEEEEECCCCee--E--eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-eEEEEeecCCCceeEEE
Q psy14961        198 -DDATCRLFDLRADKE--V--ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-CRVNHLMGHENRVSCLQ  271 (320)
Q Consensus       198 -~dg~i~iwd~~~~~~--~--~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~-~~~~~~~~h~~~i~~i~  271 (320)
                       .|..+.|||+.+.-.  .  ..+.. ...-+..++.+..+.+++.+|.....++++|++.. ....  .-.+.-+..+.
T Consensus       126 rnds~~~Iwdi~s~ltvPke~~~fs~-~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~--svnTk~vqG~t  202 (783)
T KOG1008|consen  126 RNDSSLKIWDINSLLTVPKESPLFSS-STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS--SVNTKYVQGIT  202 (783)
T ss_pred             cccCCccceecccccCCCcccccccc-ccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh--hhhhhhcccce
Confidence             366899999986521  1  11111 12223457778888889999999999999997522 1111  11234567788


Q ss_pred             ECc-CCCeEEEecCCCceEeee----cchHhhhheeeeeeecCCcceEE
Q psy14961        272 VSP-DGTAFSSGSWDTTLRDEE----SKNRYVQYLLRSRITKPTQGLTV  315 (320)
Q Consensus       272 ~s~-~~~~l~s~s~D~~ir~~~----~~~~~~~~~~~~~~~~~~~~~~~  315 (320)
                      +.| .+.++++-. |+.|-+||    .++++ +..+++-..||++=+++
T Consensus       203 Vdp~~~nY~cs~~-dg~iAiwD~~rnienpl-~~i~~~~N~~~~~l~~~  249 (783)
T KOG1008|consen  203 VDPFSPNYFCSNS-DGDIAIWDTYRNIENPL-QIILRNENKKPKQLFAL  249 (783)
T ss_pred             ecCCCCCceeccc-cCceeeccchhhhccHH-HHHhhCCCCcccceeeE
Confidence            899 788888776 99999999    44443 44455566777765554

>KOG3617|consensus

Probab=97.00  E-value=0.038  Score=52.42  Aligned_cols=107  Identities=14%  Similarity=0.240  Sum_probs=78.0

Q ss_pred             EEEcCCCCEEEEec----CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         25 CAYAPSGSVVASGG----LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        25 ~~~~~~~~~l~s~~----~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      ..|+|...+++.++    +.|++.||--..   ....-.+.+.|   ++++.|.|..-.|+.|-.-|.+.+|..++.+.-
T Consensus        21 ~SWHPsePlfAVA~fS~er~GSVtIfadtG---EPqr~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h   94 (1416)
T KOG3617|consen   21 SSWHPSEPLFAVASFSPERGGSVTIFADTG---EPQRDVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH   94 (1416)
T ss_pred             cccCCCCceeEEEEecCCCCceEEEEecCC---CCCccccccee---hhhhccChHHHHHhhccccceeEEEecCCceee
Confidence            35899999988876    358999984211   11222233333   346888887666777777899999998776655


Q ss_pred             eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961        101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus       101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      ..-..|..++..+.|+  ++|..+.++..-|.+.+|...
T Consensus        95 tv~~th~a~i~~l~wS--~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   95 TVVETHPAPIQGLDWS--HDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eeccCCCCCceeEEec--CCCCeEEEcCCCceeEEEEee
Confidence            5556789999888885  569999999999999999764

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.98  E-value=0.25  Score=44.18  Aligned_cols=220  Identities=15%  Similarity=0.110  Sum_probs=129.9

Q ss_pred             EEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC---CCeEEEEECCCcce
Q psy14961         24 ACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG---DCTCALWDVESSQL   99 (320)
Q Consensus        24 ~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~   99 (320)
                      .+++++.++.+ +....++.+.+.|........   ....+.  .-..+.+.++++.++.+..   ++++.+.|..+++.
T Consensus        78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~---~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~  152 (381)
T COG3391          78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLG---SIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV  152 (381)
T ss_pred             ceeeCCCCCeEEEecCCCCeEEEEcCcccceee---Eeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence            55777777744 444456889998853221110   001111  3345778888888777665   68899999888887


Q ss_pred             eeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961        100 LQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ  178 (320)
Q Consensus       100 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~  178 (320)
                      ......-..+ .  .++.+++|+.++... .++.|.+.|.......+ -...                  ..   .. -.
T Consensus       153 ~~~~~vG~~P-~--~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~------------------~~---~~-~~  206 (381)
T COG3391         153 TATIPVGNTP-T--GVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVG------------------SL---VG-VG  206 (381)
T ss_pred             EEEEecCCCc-c--eEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccc------------------cc---cc-cC
Confidence            7764432233 3  344567788777665 66778888855433221 0000                  00   00 11


Q ss_pred             CCeEEEEEcCCCCEEEEeeCC---CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC-CCeEEEEcCCCC
Q psy14961        179 SDVNSVKFHPSGDAVATGSDD---ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-DYTINVWDSLKC  254 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~v~~wd~~~~  254 (320)
                      ..-..+.++|+|.++......   +.+...|..++.....-...... ....+.++|+|+.+.+... .+.+.+-|..+.
T Consensus       207 ~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         207 TGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             CCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            122468899999976555433   58999998876654331111111 2345778999999988854 478888887776


Q ss_pred             eEEEEeecCC---CceeEEEECcC
Q psy14961        255 CRVNHLMGHE---NRVSCLQVSPD  275 (320)
Q Consensus       255 ~~~~~~~~h~---~~i~~i~~s~~  275 (320)
                      ..........   ..+..+++.+.
T Consensus       286 ~v~~~~~~~~~~~~~~~~~~~~~~  309 (381)
T COG3391         286 RVVKTGPTGNEALGEPVSIAISPL  309 (381)
T ss_pred             ceeeeecccccccccceeccceee
Confidence            6665544332   24566666664

>KOG4640|consensus

Probab=96.98  E-value=0.0027  Score=57.75  Aligned_cols=72  Identities=15%  Similarity=0.148  Sum_probs=60.9

Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCcee-EEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS-CLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~-~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .+..+.|+|.-.++|++..+|.|.+.... ..++-++.-|...++ +++|.|||+.||.|=.||+|++.|.+..
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~   94 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKG   94 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCC
Confidence            34567899999999999999999998766 667777776776676 9999999999999999999999996443

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.93  E-value=0.18  Score=41.90  Aligned_cols=159  Identities=14%  Similarity=0.152  Sum_probs=95.8

Q ss_pred             CCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeE
Q psy14961        120 TGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVN  182 (320)
Q Consensus       120 ~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~  182 (320)
                      +|.++-|.+.-|  .|+.+|+.+++......-.....               -.++...+||..+.+.+.++... .+=.
T Consensus        55 ~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~-~EGW  133 (264)
T PF05096_consen   55 DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFPYP-GEGW  133 (264)
T ss_dssp             TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE-S-SS--
T ss_pred             CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEecC-Ccce
Confidence            456667777766  69999999998765543222111               14677888999988888777543 3445


Q ss_pred             EEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe---cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEE
Q psy14961        183 SVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK---KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH  259 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~  259 (320)
                      .++  .+|+.|+.......+.++|..+-+......   ....+.....+.+- +|...|=-.....|..-|..++.....
T Consensus       134 GLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~  210 (264)
T PF05096_consen  134 GLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGW  210 (264)
T ss_dssp             EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEE
T ss_pred             EEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEE
Confidence            565  346666666556789999987655443332   22222234556664 677777677777787888888877665


Q ss_pred             ee------------cC---CCceeEEEECcCCC-eEEEe
Q psy14961        260 LM------------GH---ENRVSCLQVSPDGT-AFSSG  282 (320)
Q Consensus       260 ~~------------~h---~~~i~~i~~s~~~~-~l~s~  282 (320)
                      +.            .+   .+..+.||+.|.+. +++||
T Consensus       211 iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  211 IDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             EE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            42            11   35679999998654 55655

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.89  E-value=0.0047  Score=36.64  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=28.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLR  208 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~  208 (320)
                      ...+|.+++|+|..+.+|.++.+|.|.++.++
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            34579999999999999999999999999984

>PHA02713 hypothetical protein; Provisional

Probab=96.85  E-value=0.32  Score=45.79  Aligned_cols=71  Identities=3%  Similarity=-0.011  Sum_probs=36.7

Q ss_pred             CCEEEEeeCC------CeEEEEECCC-Ce--eEeEEecCcceeeeEEEEEecCCcEEEEEeCCC--eEEEEcCCCCeEEE
Q psy14961        190 GDAVATGSDD------ATCRLFDLRA-DK--EVACYKKDSILFGATSVDFSVSGRLLFAGYNDY--TINVWDSLKCCRVN  258 (320)
Q Consensus       190 g~~l~s~s~d------g~i~iwd~~~-~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--~v~~wd~~~~~~~~  258 (320)
                      ++..+.|+.+      ..+..||..+ ++  .+...+....  ....+  .-++++.++|+.+|  .+..||..+.+-..
T Consensus       464 ~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~--~~~~~--~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~  539 (557)
T PHA02713        464 DDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLS--ALHTI--LHDNTIMMLHCYESYMLQDTFNVYTYEWNH  539 (557)
T ss_pred             CEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccc--cceeE--EECCEEEEEeeecceeehhhcCcccccccc
Confidence            5666667654      2466788776 32  1111111111  11112  23788889998887  66677766544333


Q ss_pred             EeecCC
Q psy14961        259 HLMGHE  264 (320)
Q Consensus       259 ~~~~h~  264 (320)
                      -...|+
T Consensus       540 ~~~~~~  545 (557)
T PHA02713        540 ICHQHS  545 (557)
T ss_pred             hhhhcC
Confidence            233444

>KOG1008|consensus

Probab=96.81  E-value=0.00075  Score=61.34  Aligned_cols=184  Identities=18%  Similarity=0.286  Sum_probs=111.2

Q ss_pred             ceEEEEEc--CCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEe----CCCeEEEEE
Q psy14961         21 WVMACAYA--PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGS----GDCTCALWD   93 (320)
Q Consensus        21 ~V~~~~~~--~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~----~dg~v~iwd   93 (320)
                      ++.+++..  .+..+++.|..+|.|.+-.+....++  ......+|..+.++++|.+- .+.|++|-    .|-.+.|||
T Consensus        58 y~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS--s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   58 YVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS--SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CceeehhhcCCchhhhhhccccCceEEeecCCcccc--cceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            45555543  34458888999999998876433222  12245678888999999653 45566552    357899999


Q ss_pred             CCCc--ceee--eccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc--------------EEEEeccCCccc
Q psy14961         94 VESS--QLLQ--SFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY--------------CVQSFEGHHNLI  154 (320)
Q Consensus        94 ~~~~--~~~~--~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~--------------~~~~~~~~~~~~  154 (320)
                      ++++  .+..  .|.. ......++++  ..+.+++++|...+.+.++|++...              .+.-+.+....-
T Consensus       136 i~s~ltvPke~~~fs~~~l~gqns~cw--lrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs  213 (783)
T KOG1008|consen  136 INSLLTVPKESPLFSSSTLDGQNSVCW--LRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCS  213 (783)
T ss_pred             cccccCCCccccccccccccCcccccc--ccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceec
Confidence            9876  2211  1211 2233444444  4566788999999999999987321              111111222222


Q ss_pred             cCCCeEEEEE-CcCC-eeeeeecCCC----CCeEEEEEcCCCC-EEEEeeCC-CeEEEEECC
Q psy14961        155 TDDKLVNIWD-MRTG-YCVQSFEGHQ----SDVNSVKFHPSGD-AVATGSDD-ATCRLFDLR  208 (320)
Q Consensus       155 ~~d~~i~iwd-~~~~-~~~~~~~~~~----~~v~~v~~~p~g~-~l~s~s~d-g~i~iwd~~  208 (320)
                      ..|+.|-+|| .++- .++..+....    ..+..++|+|... .+++.+.| ++|+++|+.
T Consensus       214 ~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  214 NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            3589999999 3332 2333322222    2488999999754 45666654 689999875

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.76  E-value=0.49  Score=44.25  Aligned_cols=71  Identities=20%  Similarity=0.231  Sum_probs=43.6

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccc-eeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEe
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGE-LMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~  147 (320)
                      +..++.++.|+.+...|..+++.+......... -..+.-.|.-.+..++.++.      +|.|.-+|.++|+.+-.+
T Consensus       120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~  197 (527)
T TIGR03075       120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRR  197 (527)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEec
Confidence            357888888999999999999988765421100 00011111101235665543      688999999998766543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG4649|consensus

Probab=96.75  E-value=0.24  Score=40.72  Aligned_cols=129  Identities=15%  Similarity=0.066  Sum_probs=79.4

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc----
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN----  152 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~----  152 (320)
                      ..+++.|+-.+.+..-|..+++....-. ...++.+-++..   |++++.|+..|.+.+.+.++|..+..+.....    
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~vv---gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~   98 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIVV---GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR   98 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEEE---CCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence            4578888888888888988888765422 234444444333   67899999999999999988865544422111    


Q ss_pred             --------c---ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC
Q psy14961        153 --------L---ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA  209 (320)
Q Consensus       153 --------~---~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~  209 (320)
                              .   .+.|+..+..|.++..++...+-....-.+-+..|-...|+.+...|.+.-...++
T Consensus        99 a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~  166 (354)
T KOG4649|consen   99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNP  166 (354)
T ss_pred             eEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCC
Confidence                    1   14577888888888888876543332223444555223344444455554444433

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.73  E-value=0.018  Score=51.93  Aligned_cols=121  Identities=22%  Similarity=0.222  Sum_probs=71.6

Q ss_pred             CeEEEEECcCCeee--eeecCCCCCeEEEEEcCCCCEEE-EeeCCCe--EEEEECCCCeeEeEEecCcceeeeEEEEEec
Q psy14961        158 KLVNIWDMRTGYCV--QSFEGHQSDVNSVKFHPSGDAVA-TGSDDAT--CRLFDLRADKEVACYKKDSILFGATSVDFSV  232 (320)
Q Consensus       158 ~~i~iwd~~~~~~~--~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~  232 (320)
                      ..+.++++.++...  ..+.++.   ..-+|+|+|+.|+ +...||.  |.+.|+..+.... .......  ...-.|+|
T Consensus       218 ~~i~~~~l~~g~~~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi--~~~Ps~sp  291 (425)
T COG0823         218 PRIYYLDLNTGKRPVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGI--NTSPSWSP  291 (425)
T ss_pred             ceEEEEeccCCccceeeccCCcc---CCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCcc--ccCccCCC
Confidence            35777788776533  3333333   3468999999875 4556775  5555777665332 2221111  12456999


Q ss_pred             CCcEEEEEeC-CC--eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        233 SGRLLFAGYN-DY--TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       233 ~~~~l~~g~~-dg--~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      ||+.++..+. .|  .|.+++....... .+......=..-.|||||++|+..+.+
T Consensus       292 dG~~ivf~Sdr~G~p~I~~~~~~g~~~~-riT~~~~~~~~p~~SpdG~~i~~~~~~  346 (425)
T COG0823         292 DGSKIVFTSDRGGRPQIYLYDLEGSQVT-RLTFSGGGNSNPVWSPDGDKIVFESSS  346 (425)
T ss_pred             CCCEEEEEeCCCCCcceEEECCCCCcee-EeeccCCCCcCccCCCCCCEEEEEecc
Confidence            9998887763 44  4555666554332 222222222277899999999888853

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=96.73  E-value=0.27  Score=40.89  Aligned_cols=202  Identities=10%  Similarity=0.142  Sum_probs=93.2

Q ss_pred             cceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         20 TWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      .-+++++|.|+...| +.....+.|..++.  .+.- .....+.+. +-.-.+.+..++.++++.-+++.+.++++....
T Consensus        22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~--~G~v-lr~i~l~g~-~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~   97 (248)
T PF06977_consen   22 DELSGLTYNPDTGTLFAVQDEPGEIYELSL--DGKV-LRRIPLDGF-GDYEGITYLGNGRYVLSEERDQRLYIFTIDDDT   97 (248)
T ss_dssp             S-EEEEEEETTTTEEEEEETTTTEEEEEET--T--E-EEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE----
T ss_pred             CCccccEEcCCCCeEEEEECCCCEEEEEcC--CCCE-EEEEeCCCC-CCceeEEEECCCEEEEEEcCCCcEEEEEEeccc
Confidence            348999999986655 44556666654443  2221 111122232 234456666666566655568999988873311


Q ss_pred             ------eeeecc-----cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         99 ------LLQSFH-----GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        99 ------~~~~~~-----~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                            ....+.     .++...-.+++.+.  ++.|+.+-...-..++.++...             ....+.+.+...
T Consensus        98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~--~~~L~v~kE~~P~~l~~~~~~~-------------~~~~~~~~~~~~  162 (248)
T PF06977_consen   98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPK--TNRLFVAKERKPKRLYEVNGFP-------------GGFDLFVSDDQD  162 (248)
T ss_dssp             TT--EEEEEEEE---S---SS--EEEEEETT--TTEEEEEEESSSEEEEEEESTT--------------SS--EEEE-HH
T ss_pred             cccchhhceEEecccccCCCcceEEEEEcCC--CCEEEEEeCCCChhhEEEcccc-------------Cccceeeccccc
Confidence                  111111     23344666776543  4566666555444555443211             011111111100


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCc-------ceeeeEEEEEecCCcEEEE
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDS-------ILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~s~~~~~l~~  239 (320)
                         ..........+.+++++|.. +.++...++..+..+| ..++.+..+.-..       .+..+..++|.++|++.++
T Consensus       163 ---~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv  238 (248)
T PF06977_consen  163 ---LDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV  238 (248)
T ss_dssp             ---HH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE
T ss_pred             ---cccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE
Confidence               00011233457889999975 4556677788899999 5566655544322       1234577999999976555


Q ss_pred             EeCCCe
Q psy14961        240 GYNDYT  245 (320)
Q Consensus       240 g~~dg~  245 (320)
                      + +-+.
T Consensus       239 s-EpNl  243 (248)
T PF06977_consen  239 S-EPNL  243 (248)
T ss_dssp             E-TTTE
T ss_pred             c-CCce
Confidence            4 4433

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.64  E-value=0.13  Score=46.60  Aligned_cols=101  Identities=17%  Similarity=0.112  Sum_probs=54.9

Q ss_pred             EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      ..++|.+.+ .+|+-..+++|.|+.--..+....+..+.   .+..+ |.  |.+|...+++ .|.+||..++..++++.
T Consensus        72 ~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i~~~~---~~~~I-f~--G~LL~~~~~~-~i~~yDw~~~~~i~~i~  143 (443)
T PF04053_consen   72 LSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKSIKLPF---SVEKI-FG--GNLLGVKSSD-FICFYDWETGKLIRRID  143 (443)
T ss_dssp             SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT-----SS----EEEE-E---SSSEEEEETT-EEEEE-TTT--EEEEES
T ss_pred             eEEEEecCc-cEEEEECCCeEEEEEcCccccceEEcCCc---ccceE-Ec--CcEEEEECCC-CEEEEEhhHcceeeEEe
Confidence            467888854 46666668889996322111111222211   12222 33  8877777655 89999999988887765


Q ss_pred             cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        262 GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       262 ~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      -  .+|..+.||++|.++|-.+.| ++.+.+.
T Consensus       144 v--~~vk~V~Ws~~g~~val~t~~-~i~il~~  172 (443)
T PF04053_consen  144 V--SAVKYVIWSDDGELVALVTKD-SIYILKY  172 (443)
T ss_dssp             S---E-EEEEE-TTSSEEEEE-S--SEEEEEE
T ss_pred             c--CCCcEEEEECCCCEEEEEeCC-eEEEEEe
Confidence            2  248999999999999988865 5555553

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.44  E-value=0.064  Score=51.68  Aligned_cols=121  Identities=17%  Similarity=0.218  Sum_probs=83.1

Q ss_pred             eCCCeEEEEECCCcceeeecccCccc-eeEEEEeeCC-----CCCEEEEEeCCCeEEEEeCCCCc--EEEE----e----
Q psy14961         84 SGDCTCALWDVESSQLLQSFHGHTGE-LMDLDLAPSE-----TGNTFVSGSSDKLVNIWDMRTGY--CVQS----F----  147 (320)
Q Consensus        84 ~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~-----~~~~l~s~~~dg~i~lwd~~~~~--~~~~----~----  147 (320)
                      .....++-.|+++|+.+..+..+... |.  .++|..     +....+.|-.+..+..||.|-..  ++..    +    
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~--~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~  578 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHDDIPVV--DIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN  578 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCCCccee--EecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCC
Confidence            35678888899999999999877654 43  444432     23455677777889999987532  2211    1    


Q ss_pred             ---------ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEEC
Q psy14961        148 ---------EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL  207 (320)
Q Consensus       148 ---------~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~  207 (320)
                               .|+-.+.+.+|.|++||-........+++...+|..|+.+.||+++++.+ +..+.+++.
T Consensus       579 ~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  579 NFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             CceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence                     12223335789999999533334445677889999999999999987666 457888874

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG2079|consensus

Probab=96.40  E-value=0.013  Score=56.78  Aligned_cols=100  Identities=18%  Similarity=0.246  Sum_probs=70.9

Q ss_pred             CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeE
Q psy14961        190 GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSC  269 (320)
Q Consensus       190 g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~  269 (320)
                      +..++.|+..|.+...|....-. ..+.......++++++|+.+|+.++.|-.+|.|.+||+.++..++-+..|..+.++
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~-~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~  177 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLG-PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG  177 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccc-hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence            44677888888888888765311 12233444556889999999999999999999999999988877777655544433


Q ss_pred             ---EEECcCCCeEEEecCCCceEeee
Q psy14961        270 ---LQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       270 ---i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                         +.+..++..+.++..-|.  +|+
T Consensus       178 vi~v~~t~~nS~llt~D~~Gs--f~~  201 (1206)
T KOG2079|consen  178 VIFVGRTSQNSKLLTSDTGGS--FWK  201 (1206)
T ss_pred             EEEEEEeCCCcEEEEccCCCc--eEE
Confidence               344455567787777665  444

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.39  E-value=0.71  Score=41.70  Aligned_cols=66  Identities=17%  Similarity=0.215  Sum_probs=39.9

Q ss_pred             EEEcCCCCEEEEecCC-----------CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         25 CAYAPSGSVVASGGLD-----------NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        25 ~~~~~~~~~l~s~~~d-----------g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      ++.+|.|..||....+           ..|.+|+...     .....+.-..+.+.++.|..+ +.|+.-..||.+++||
T Consensus        34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~sG-----~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~  107 (410)
T PF04841_consen   34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSSG-----KLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYD  107 (410)
T ss_pred             EEEcCCCceEEEEecCcccccccCCCCcEEEEECCCC-----CEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEe
Confidence            3445555555555333           1577886532     222223222367888888764 5666677899999999


Q ss_pred             CCC
Q psy14961         94 VES   96 (320)
Q Consensus        94 ~~~   96 (320)
                      +..
T Consensus       108 ~~G  110 (410)
T PF04841_consen  108 LFG  110 (410)
T ss_pred             CCC
Confidence            863

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.25  E-value=1.1  Score=42.46  Aligned_cols=197  Identities=15%  Similarity=0.106  Sum_probs=100.7

Q ss_pred             cCeEEEEecCCCCEEEEEe------CCCeEEEEECC-CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCe-EEEEe
Q psy14961         66 SFISCCIFPNSDQQILTGS------GDCTCALWDVE-SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKL-VNIWD  137 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~------~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~-i~lwd  137 (320)
                      ..+.....+++++.++...      .|+.-.+|-.. .+.......+  .....-.|  +++|..+.+...... +++.+
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g--~~~t~PsW--spDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG--HSLTRPSW--SLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC--CCCCCceE--CCCCCceEEEecCcceEEEec
Confidence            3566778889998876554      34444555332 2222222222  12333444  556777777654322 22222


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEE---EECCCCeeEe
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRL---FDLRADKEVA  214 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~i---wd~~~~~~~~  214 (320)
                      -.                ..+.+.+.++..++...   .....|.++.|+|||..++... ++.|.+   -....++ ..
T Consensus       426 ~~----------------~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~  484 (591)
T PRK13616        426 DP----------------ATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YA  484 (591)
T ss_pred             cC----------------CCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-ee
Confidence            11                12344444554443322   2345699999999999987765 467777   4433443 11


Q ss_pred             EEe---cCcceee-eEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeec--CCCceeEEEECcCCCeEEEecCCCc
Q psy14961        215 CYK---KDSILFG-ATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMG--HENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       215 ~~~---~~~~~~~-~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~--h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                      .-.   ....... ..++.|..+++++ ++..++...+|...- +.....+.+  ...++..|+-+++ . +..+..++.
T Consensus       485 l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~-~-iyv~~~~g~  561 (591)
T PRK13616        485 LTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS-T-VYVTDARAV  561 (591)
T ss_pred             ecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc-e-EEEEcCCce
Confidence            100   0001111 3678899999855 666555555664221 111111122  2567788887763 3 444555664


Q ss_pred             eEe
Q psy14961        288 LRD  290 (320)
Q Consensus       288 ir~  290 (320)
                      ++.
T Consensus       562 ~~l  564 (591)
T PRK13616        562 LQL  564 (591)
T ss_pred             EEe
Confidence            444

>KOG4441|consensus

Probab=96.21  E-value=1.1  Score=42.24  Aligned_cols=228  Identities=17%  Similarity=0.198  Sum_probs=105.6

Q ss_pred             cCCCCEEEEecCCC------eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC------CeEEEEECC
Q psy14961         28 APSGSVVASGGLDN------KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD------CTCALWDVE   95 (320)
Q Consensus        28 ~~~~~~l~s~~~dg------~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~   95 (320)
                      +..+.+++.||.++      .+..||...  ..+.....+..... -.++... ++...++||.|      .++..||+.
T Consensus       282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~--~~w~~~a~m~~~r~-~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~  357 (571)
T KOG4441|consen  282 SVSGKLVAVGGYNRQGQSLRSVECYDPKT--NEWSSLAPMPSPRC-RVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPR  357 (571)
T ss_pred             CCCCeEEEECCCCCCCcccceeEEecCCc--CcEeecCCCCcccc-cccEEEE-CCEEEEEccccCCCcccceEEEecCC
Confidence            33455777777763      566776532  12222222222222 2223332 35677788888      466788887


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe--eeee
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY--CVQS  173 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~  173 (320)
                      +++-.. .......-....++.- +|...++|+.||.-.+                      ..+..||.++.+  .+..
T Consensus       358 ~~~W~~-~a~M~~~R~~~~v~~l-~g~iYavGG~dg~~~l----------------------~svE~YDp~~~~W~~va~  413 (571)
T KOG4441|consen  358 TNQWTP-VAPMNTKRSDFGVAVL-DGKLYAVGGFDGEKSL----------------------NSVECYDPVTNKWTPVAP  413 (571)
T ss_pred             CCceec-cCCccCccccceeEEE-CCEEEEEecccccccc----------------------ccEEEecCCCCcccccCC
Confidence            766332 1111111112222221 4677788888853211                      122233332221  1111


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCC------eEEEEECCCCeeEeE--EecCcceeeeEEEEEecCCcEEEEEeCCC-
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDA------TCRLFDLRADKEVAC--YKKDSILFGATSVDFSVSGRLLFAGYNDY-  244 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg------~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-  244 (320)
                      +.........+.+  +|...++|+.++      ++..||..+++=...  ........+   + -.-++.+.+.|+.++ 
T Consensus       414 m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g---~-a~~~~~iYvvGG~~~~  487 (571)
T KOG4441|consen  414 MLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG---V-AVLNGKIYVVGGFDGT  487 (571)
T ss_pred             CCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce---E-EEECCEEEEECCccCC
Confidence            1111111112222  466777887554      456777665431111  011111111   1 234788888888776 


Q ss_pred             ----eEEEEcCCCCeEEEEeecCCCceeEEEEC-cCCCeEEEecCCCceEe
Q psy14961        245 ----TINVWDSLKCCRVNHLMGHENRVSCLQVS-PDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       245 ----~v~~wd~~~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s~s~D~~ir~  290 (320)
                          +|..||..+..-... ..-..+....... -+++..+.|+.|+.-+.
T Consensus       488 ~~~~~VE~ydp~~~~W~~v-~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l  537 (571)
T KOG4441|consen  488 SALSSVERYDPETNQWTMV-APMTSPRSAVGVVVLGGKLYAVGGFDGNNNL  537 (571)
T ss_pred             CccceEEEEcCCCCceeEc-ccCccccccccEEEECCEEEEEecccCcccc
Confidence                367788655332211 1111122222222 36788999998886553

>KOG2079|consensus

Probab=96.14  E-value=0.024  Score=55.06  Aligned_cols=110  Identities=12%  Similarity=0.251  Sum_probs=75.7

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  103 (320)
                      ++.-.-.+..++.|+..|.+-..|....  -.. ...-..-.++|++++|+.+|..++.|-.+|.|.+||..++++++.+
T Consensus        92 v~s~a~~~~~ivi~Ts~ghvl~~d~~~n--L~~-~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i  168 (1206)
T KOG2079|consen   92 VISSAIVVVPIVIGTSHGHVLLSDMTGN--LGP-LHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVI  168 (1206)
T ss_pred             eeeeeeeeeeEEEEcCchhhhhhhhhcc--cch-hhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeee
Confidence            3333445567888888888888776321  000 1111223588999999999999999999999999999999888888


Q ss_pred             ccCccceeEEEEee-CCCCCEEEEEeCCCeEEEEeC
Q psy14961        104 HGHTGELMDLDLAP-SETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus       104 ~~~~~~v~~~~~~~-~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      ..|..+...+-+.- ..++..++++..-|.  +|.+
T Consensus       169 ~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  169 TEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             eecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            77777666654332 233456888877776  4543

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.07  E-value=0.12  Score=48.82  Aligned_cols=106  Identities=17%  Similarity=0.116  Sum_probs=58.9

Q ss_pred             CCeEEEEEcCCCCEEEEee------CCC--eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCe-EEEE
Q psy14961        179 SDVNSVKFHPSGDAVATGS------DDA--TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYT-INVW  249 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s------~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~-v~~w  249 (320)
                      ..+.+.+++|+|+.++..-      .|.  .+.+++... ... ......   ..+.-.|+|+|..|++...... +++.
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~~-~lt~g~---~~t~PsWspDG~~lw~v~dg~~~~~v~  424 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VAV-QVLEGH---SLTRPSWSLDADAVWVVVDGNTVVRVI  424 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-cce-eeecCC---CCCCceECCCCCceEEEecCcceEEEe
Confidence            3578899999999876554      244  455555422 221 111111   1356779999888877653322 2232


Q ss_pred             cCCCCeEEE--Eee------cCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        250 DSLKCCRVN--HLM------GHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       250 d~~~~~~~~--~~~------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      +......+.  ...      .....|..+.|||||+.+|--. ++.+.+
T Consensus       425 ~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        425 RDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             ccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence            211111111  000      2355799999999999877654 355544

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.00  E-value=0.9  Score=39.18  Aligned_cols=115  Identities=13%  Similarity=0.081  Sum_probs=68.7

Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCC--Ce---eEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRA--DK---EVACYKKDSILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~--~~---~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                      +..+..+.++-.--+.|+||||++.|+.+ +..+.|.-+++..  +.   ..............-.++...+|.+.+++.
T Consensus       152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~  231 (307)
T COG3386         152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV  231 (307)
T ss_pred             CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc
Confidence            33344444444445799999999887655 4557888887753  11   100111100001123456677888876544


Q ss_pred             CCC-eEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEec
Q psy14961        242 NDY-TINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGS  283 (320)
Q Consensus       242 ~dg-~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s  283 (320)
                      ..| .|..|+.. ++++....-+...+++++|-- +.+.|...+
T Consensus       232 ~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         232 WGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             cCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            444 89999987 778777766657788888874 555544443

>KOG4441|consensus

Probab=95.89  E-value=1.5  Score=41.45  Aligned_cols=97  Identities=15%  Similarity=0.186  Sum_probs=49.4

Q ss_pred             CCCEEEEecCC-C-----eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC-----eEEEEECCCcc
Q psy14961         30 SGSVVASGGLD-N-----KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC-----TCALWDVESSQ   98 (320)
Q Consensus        30 ~~~~l~s~~~d-g-----~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~   98 (320)
                      ++.+.++||.| |     ++..||...  +.+.....+............  ++...+.||.||     +|..||+.+.+
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~--~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~  407 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRT--NQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNK  407 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCC--CceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCc
Confidence            44677888888 3     455565532  233333333332222222222  466777888885     46778877654


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCe
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKL  132 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~  132 (320)
                      --..-. +.......+.+.. +|...++|+.++.
T Consensus       408 W~~va~-m~~~r~~~gv~~~-~g~iYi~GG~~~~  439 (571)
T KOG4441|consen  408 WTPVAP-MLTRRSGHGVAVL-GGKLYIIGGGDGS  439 (571)
T ss_pred             ccccCC-CCcceeeeEEEEE-CCEEEEEcCcCCC
Confidence            321111 1112233333322 4677778886664

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.73  E-value=0.04  Score=32.66  Aligned_cols=30  Identities=27%  Similarity=0.475  Sum_probs=27.5

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEec
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIA   49 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~   49 (320)
                      ..|..++|+|...+||.|..+|.|.+|.++
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            568999999999999999999999999874

>KOG1897|consensus

Probab=95.69  E-value=2.4  Score=41.63  Aligned_cols=111  Identities=18%  Similarity=0.176  Sum_probs=65.5

Q ss_pred             EEcCCCCEEEEecCCCeEEEEEecc-cCCccc--ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce---
Q psy14961         26 AYAPSGSVVASGGLDNKVTVYAIAL-EDDSSA--KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL---   99 (320)
Q Consensus        26 ~~~~~~~~l~s~~~dg~i~v~~~~~-~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---   99 (320)
                      ..+.+|.+.+.+..+|.+...-+.. .+....  .+....+..+...|+.+.+ ...+++|++-|.=++-.+.+...   
T Consensus       264 ~v~~~~~~yLl~d~~G~Lf~l~l~~~~e~~s~~~lkve~lge~siassi~~L~-ng~lFvGS~~gdSqLi~L~~e~d~gs  342 (1096)
T KOG1897|consen  264 RVDLQGSRYLLGDEDGMLFKLLLSHTGETVSGLDLKVEYLGETSIASSINYLD-NGVLFVGSRFGDSQLIKLNTEPDVGS  342 (1096)
T ss_pred             cccCCccEEEEecCCCcEEEEEeecccccccceEEEEEecCCcchhhhhhccc-CceEEEeccCCceeeEEccccCCCCc
Confidence            4567888888888999887776652 222222  1223334445556666654 45899999887777766654321   


Q ss_pred             ----eeecccCccceeEEEEeeCC--CCCEEEEEe---CCCeEEEEeC
Q psy14961        100 ----LQSFHGHTGELMDLDLAPSE--TGNTFVSGS---SDKLVNIWDM  138 (320)
Q Consensus       100 ----~~~~~~~~~~v~~~~~~~~~--~~~~l~s~~---~dg~i~lwd~  138 (320)
                          +..+. .-+++.++++.-..  .+..+++++   .||++|+..-
T Consensus       343 y~~ilet~~-NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRn  389 (1096)
T KOG1897|consen  343 YVVILETFV-NLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRN  389 (1096)
T ss_pred             hhhhhhhcc-cccceeeEEEEeccccCCceEEEEeCCCCCCcEEEEec
Confidence                12232 34577776654332  234555543   4888888753

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.68  E-value=0.075  Score=46.97  Aligned_cols=102  Identities=16%  Similarity=0.123  Sum_probs=60.3

Q ss_pred             cCCCCEEEEe---------eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        187 HPSGDAVATG---------SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       187 ~p~g~~l~s~---------s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      |||+++++..         +..+.+.++|+.+++.......   ........|||+|+.+|... ++.|.+++...+...
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~---~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~   76 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP---PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET   76 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E---ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC---ccccccceeecCCCeeEEEe-cCceEEEECCCCCeE
Confidence            4677666552         2345788999998765432222   11245688999999999887 567999987655332


Q ss_pred             -EEeec-------C---------CCceeEEEECcCCCeEEEecCCC-ceEeee
Q psy14961        258 -NHLMG-------H---------ENRVSCLQVSPDGTAFSSGSWDT-TLRDEE  292 (320)
Q Consensus       258 -~~~~~-------h---------~~~i~~i~~s~~~~~l~s~s~D~-~ir~~~  292 (320)
                       .+..+       -         -+.=..+.|||||+.||....|. .++.+.
T Consensus        77 ~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~  129 (353)
T PF00930_consen   77 QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYP  129 (353)
T ss_dssp             ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEE
T ss_pred             EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEE
Confidence             11222       0         11236789999999999887543 344443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.51  E-value=1  Score=42.55  Aligned_cols=114  Identities=14%  Similarity=0.179  Sum_probs=69.5

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT  155 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~  155 (320)
                      ++..++-+....+.|||...+.+...-. ...+.|..++|...++|+.+++.+-...|.++--...    .+   .+...
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~----dy---~~~~p  113 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRY----DY---TNKGP  113 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccch----hh---hcCCc
Confidence            3333343444589999998776443221 3467899999999999999999999999988853210    00   00000


Q ss_pred             CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEEC
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL  207 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~  207 (320)
                      .-..++-.|++.      +..  .+|....|.++|..++.++  +.+.|+|-
T Consensus       114 ~w~~i~~i~i~~------~T~--h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  114 SWAPIRKIDISS------HTP--HPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             ccceeEEEEeec------CCC--CCccceeEecCCeEEEEeC--CEEEEECC
Confidence            011233333321      122  4688999999987555443  57888874

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.47  E-value=0.22  Score=41.56  Aligned_cols=106  Identities=25%  Similarity=0.349  Sum_probs=71.5

Q ss_pred             EEEEEcCCCC-EEEEeeCCC-eEEEEECCCCeeEeEEe-cCc-ceeeeEEEEEecCCcEEEEEeC-----CCeEEEEcCC
Q psy14961        182 NSVKFHPSGD-AVATGSDDA-TCRLFDLRADKEVACYK-KDS-ILFGATSVDFSVSGRLLFAGYN-----DYTINVWDSL  252 (320)
Q Consensus       182 ~~v~~~p~g~-~l~s~s~dg-~i~iwd~~~~~~~~~~~-~~~-~~~~~~~~~~s~~~~~l~~g~~-----dg~v~~wd~~  252 (320)
                      ..|+++|... -++.+-.=| ...++|....+...... ... ..++  --.|||||.+|+.--+     .|.|-+||..
T Consensus        71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyG--HGvfs~dG~~LYATEndfd~~rGViGvYd~r  148 (366)
T COG3490          71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYG--HGVFSPDGRLLYATENDFDPNRGVIGVYDAR  148 (366)
T ss_pred             CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeec--ccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence            3577888654 345554444 46788887766543332 111 2222  2349999999987644     3789999976


Q ss_pred             CC-eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961        253 KC-CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       253 ~~-~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      .+ .++.++..|.-.-..+.+.+||+.|+.+.  |-|+..
T Consensus       149 ~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIeth  186 (366)
T COG3490         149 EGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETH  186 (366)
T ss_pred             cccceecccccCCcCcceeEEecCCcEEEEeC--Cceecc
Confidence            43 56778888888888999999999998874  556644

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.34  E-value=2.1  Score=38.70  Aligned_cols=113  Identities=12%  Similarity=0.128  Sum_probs=58.3

Q ss_pred             EEEEEcCCCCEEEEe-cCCC----eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-----------
Q psy14961         23 MACAYAPSGSVVASG-GLDN----KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-----------   86 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~-~~dg----~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----------   86 (320)
                      ....++|+|++||.+ +..|    .++++|+....   .....+..  .....+.|.++++.++-...+           
T Consensus       127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~---~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~  201 (414)
T PF02897_consen  127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK---FLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP  201 (414)
T ss_dssp             EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTE---EEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred             eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCc---CcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence            367899999988865 3333    47888774321   11111111  111237888887766544432           


Q ss_pred             CeEEEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCC----CeEEEEeCCC
Q psy14961         87 CTCALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSD----KLVNIWDMRT  140 (320)
Q Consensus        87 g~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~lwd~~~  140 (320)
                      ..|..|.+.+...  ...+.........+.+..+.++++++..+..    ..+.+.|+..
T Consensus       202 ~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~  261 (414)
T PF02897_consen  202 RQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD  261 (414)
T ss_dssp             EEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred             cEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence            2477888766532  2334433333323444556677776643322    2355555544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=95.31  E-value=2  Score=38.40  Aligned_cols=194  Identities=14%  Similarity=0.159  Sum_probs=113.1

Q ss_pred             EEEecCCCCEEE-EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC---CCeEEEEeCCCCcEEE
Q psy14961         70 CCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS---DKLVNIWDMRTGYCVQ  145 (320)
Q Consensus        70 ~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg~i~lwd~~~~~~~~  145 (320)
                      .+...+.+..++ +...+..|.+.|..+.........-. ....+++  +++++.+..+..   ++.+.+.|-.++... 
T Consensus        78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~--~~~~~~vYV~n~~~~~~~vsvid~~t~~~~-  153 (381)
T COG3391          78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAV--DPDGKYVYVANAGNGNNTVSVIDAATNKVT-  153 (381)
T ss_pred             ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEE--CCCCCEEEEEecccCCceEEEEeCCCCeEE-
Confidence            445555666554 44456899999977766655443211 2223433  455666665544   345555554444332 


Q ss_pred             EeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEec---Ccc
Q psy14961        146 SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKK---DSI  221 (320)
Q Consensus       146 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~---~~~  221 (320)
                                                .+...-..+ ..++++|+|..++.+ ..++.+.+.|........ ...   -..
T Consensus       154 --------------------------~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~  205 (381)
T COG3391         154 --------------------------ATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGV  205 (381)
T ss_pred             --------------------------EEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-ccccccccc
Confidence                                      222111123 679999999976554 478899999976654432 110   111


Q ss_pred             eeeeEEEEEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCCCeEEEec-CCCceEeeecch
Q psy14961        222 LFGATSVDFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDGTAFSSGS-WDTTLRDEESKN  295 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~~~l~s~s-~D~~ir~~~~~~  295 (320)
                      ......+.++|+|+.+......   +.+...|.........-..-.. .-..++++|+|+.+.... ..+++.+-+..+
T Consensus       206 ~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~  284 (381)
T COG3391         206 GTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGAT  284 (381)
T ss_pred             CCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCC
Confidence            1234568899999977665433   5888888877655543121111 456789999999887773 335666555433

>KOG2395|consensus

Probab=95.29  E-value=0.21  Score=45.21  Aligned_cols=127  Identities=14%  Similarity=0.151  Sum_probs=84.3

Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-----EEEeCCCeEEEEeCCCC-c-EEEEe-----
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-----VSGSSDKLVNIWDMRTG-Y-CVQSF-----  147 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-----~s~~~dg~i~lwd~~~~-~-~~~~~-----  147 (320)
                      +.++.....++--|++.|+.+..++.+.. |.-+.+.|..++..+     +.|-.|..|.-||.+-. . .+..-     
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy  427 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY  427 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence            44556667788889999999988887665 554555554333333     45566777888998632 1 11111     


Q ss_pred             -------------ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC
Q psy14961        148 -------------EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR  208 (320)
Q Consensus       148 -------------~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~  208 (320)
                                   +|+-.+.+.+|.|++||-.-...-..+++...+|..|..+.+|+++++.+ +..+.+.|+.
T Consensus       428 ~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~  500 (644)
T KOG2395|consen  428 STKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL  500 (644)
T ss_pred             ccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence                         12222335688899999733344556788899999999999999887665 5678787753

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.20  E-value=0.41  Score=43.28  Aligned_cols=135  Identities=16%  Similarity=0.167  Sum_probs=77.7

Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCC--------CEEEEeeCCCeEEEEECCCCe-eEeE--EecCcceeeeEEE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG--------DAVATGSDDATCRLFDLRADK-EVAC--YKKDSILFGATSV  228 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g--------~~l~s~s~dg~i~iwd~~~~~-~~~~--~~~~~~~~~~~~~  228 (320)
                      ++--|++.|+.+..+.-|..-  -+.|.|+.        ..|+-.| +..|.-.|.+-.. .+..  ..........++.
T Consensus       492 LykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS-~~svFrIDPR~~gNKi~v~esKdY~tKn~Fss~  568 (776)
T COG5167         492 LYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLS-DYSVFRIDPRARGNKIKVVESKDYKTKNKFSSG  568 (776)
T ss_pred             ceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeec-ccceEEecccccCCceeeeeehhcccccccccc
Confidence            334466667777776655544  47777752        3344444 4444444554321 1111  1111100111111


Q ss_pred             EEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhh
Q psy14961        229 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~  299 (320)
                       ..-.+.++|.|+..|.|++||....+-...+.+-...|..|..+.+|+.++.. ...++-+-+....+-+
T Consensus       569 -~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaT-Ck~yllL~d~~ik~g~  637 (776)
T COG5167         569 -MTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILAT-CKNYLLLTDVPIKYGQ  637 (776)
T ss_pred             -ccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEe-ecceEEEEecccccCC
Confidence             11234599999999999999965544444466677899999999999985533 3466777776555554

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=95.13  E-value=2.2  Score=37.75  Aligned_cols=209  Identities=19%  Similarity=0.207  Sum_probs=92.7

Q ss_pred             EecCCCCEEEEEe-CCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE--EEE
Q psy14961         72 IFPNSDQQILTGS-GDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC--VQS  146 (320)
Q Consensus        72 ~~~~~~~~l~s~~-~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~--~~~  146 (320)
                      .|..+|++|+.++ .||  .+.+.|+++++..+--.+.........+++  +.+.++-...+..|+.-|+.+.+.  +..
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~--~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~  119 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSP--DDRALYYVKNGRSLRRVDLDTLEERVVYE  119 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-T--TSSEEEEEETTTEEEEEETTT--EEEEEE
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEec--CCCeEEEEECCCeEEEEECCcCcEEEEEE
Confidence            4567786665544 455  555558888776543332222222333443  345665554556788888887653  222


Q ss_pred             eccCC----ccc-c--------------------------------CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC
Q psy14961        147 FEGHH----NLI-T--------------------------------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS  189 (320)
Q Consensus       147 ~~~~~----~~~-~--------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~  189 (320)
                      +...-    ..+ .                                ....|...|+++++....+. -...+..+.|+|.
T Consensus       120 ~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~  198 (386)
T PF14583_consen  120 VPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPT  198 (386)
T ss_dssp             --TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETT
T ss_pred             CCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCC
Confidence            21110    000 1                                12235555777776544333 4456788999997


Q ss_pred             CCEEEEeeC----CC-eEEEEECCCC--eeEeEEecCcceeeeEEEEEecCCcEEEE-Ee----CCCeEEEEcCCCCeEE
Q psy14961        190 GDAVATGSD----DA-TCRLFDLRAD--KEVACYKKDSILFGATSVDFSVSGRLLFA-GY----NDYTINVWDSLKCCRV  257 (320)
Q Consensus       190 g~~l~s~s~----dg-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-g~----~dg~v~~wd~~~~~~~  257 (320)
                      ...+++=|.    +. .-+||-+++.  ......+... .-.+.-=-|.|||..|.- +.    .+..|.-+|..+....
T Consensus       199 dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~-~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~  277 (386)
T PF14583_consen  199 DPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRME-GESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERR  277 (386)
T ss_dssp             EEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---T-TEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EE
T ss_pred             CCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCC-CcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCce
Confidence            665544332    22 2366755432  2222222211 112233458899986654 22    2335666777765443


Q ss_pred             EEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        258 NHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      . +. ...+-..+--|+||+++|-=|.|.
T Consensus       278 ~-~~-~~p~~~H~~ss~Dg~L~vGDG~d~  304 (386)
T PF14583_consen  278 R-LM-EMPWCSHFMSSPDGKLFVGDGGDA  304 (386)
T ss_dssp             E-EE-EE-SEEEEEE-TTSSEEEEEE---
T ss_pred             E-EE-eCCceeeeEEcCCCCEEEecCCCC
Confidence            2 22 222455777789999888766653

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.05  E-value=1.1  Score=37.56  Aligned_cols=107  Identities=20%  Similarity=0.124  Sum_probs=63.5

Q ss_pred             CeEEEEEcCCCCEEEEee---CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc-CCCCe
Q psy14961        180 DVNSVKFHPSGDAVATGS---DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD-SLKCC  255 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd-~~~~~  255 (320)
                      .+.+.+++++|..+|...   ....+.++....  .........   ....-.|++++...+....+...+++. ...+.
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~--~~~~~~~g~---~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~   99 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG--PVRPVLTGG---SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGT   99 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC--cceeeccCC---ccccccccCCCCEEEEEcCCCceEEEEecCCCc
Confidence            678999999999887665   233455554432  222211111   235567999988888877676667663 22221


Q ss_pred             E-EEEeecC--CCceeEEEECcCCCeEEEec---CCCceEee
Q psy14961        256 R-VNHLMGH--ENRVSCLQVSPDGTAFSSGS---WDTTLRDE  291 (320)
Q Consensus       256 ~-~~~~~~h--~~~i~~i~~s~~~~~l~s~s---~D~~ir~~  291 (320)
                      . .......  ...|+.+.+||||..+|.-.   .++.+.+-
T Consensus       100 ~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va  141 (253)
T PF10647_consen  100 GEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVA  141 (253)
T ss_pred             ceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEE
Confidence            1 1112211  12899999999999876665   23555543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PHA02713 hypothetical protein; Provisional

Probab=95.03  E-value=3.2  Score=39.19  Aligned_cols=53  Identities=6%  Similarity=0.006  Sum_probs=31.2

Q ss_pred             cCCcEEEEEeCC------CeEEEEcCCC---CeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        232 VSGRLLFAGYND------YTINVWDSLK---CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       232 ~~~~~l~~g~~d------g~v~~wd~~~---~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      -++++.+.|+.+      ..+..||..+   ...+..+.........++  -+|++.+.||.|+
T Consensus       462 ~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~--~~~~iyv~Gg~~~  523 (557)
T PHA02713        462 HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL--HDNTIMMLHCYES  523 (557)
T ss_pred             ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE--ECCEEEEEeeecc
Confidence            467777777643      2467788664   333333332222222223  3789999999998

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=95.02  E-value=1.9  Score=36.59  Aligned_cols=249  Identities=15%  Similarity=0.215  Sum_probs=127.9

Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEecccCCc---ccccccccc-----cccCeEEEEecCCC------------CEEEE
Q psy14961         23 MACAYAPSGSVVASGGLDNKVTVYAIALEDDS---SAKKKTVAT-----HTSFISCCIFPNSD------------QQILT   82 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~---~~~~~~~~~-----h~~~v~~~~~~~~~------------~~l~s   82 (320)
                      +.++|+|.+.+-++....+...+||.+.....   ......+..     ..+..+-+.|....            ..++.
T Consensus        26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif  105 (336)
T TIGR03118        26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLF  105 (336)
T ss_pred             ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEE
Confidence            57899999988888888899999998522111   111112221     11233444443211            23678


Q ss_pred             EeCCCeEEEEECCCcce-----eeecc-cCcccee-EEEEeeCCCCCEEEEE-eCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961         83 GSGDCTCALWDVESSQL-----LQSFH-GHTGELM-DLDLAPSETGNTFVSG-SSDKLVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~-----~~~~~-~~~~~v~-~~~~~~~~~~~~l~s~-~~dg~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      +++||+|.-|...-...     ...+. ...+.|+ .+++.....+++|+.+ -..+.|.++|-.-.+..  ..+.   .
T Consensus       106 ~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~--~~g~---F  180 (336)
T TIGR03118       106 VTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPP--LPGS---F  180 (336)
T ss_pred             EeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcccccc--CCCC---c
Confidence            89999999998532111     11122 1123343 3555544334555544 34677777764322110  0000   0


Q ss_pred             cCCCeEEEEECcCC---eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEe
Q psy14961        155 TDDKLVNIWDMRTG---YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       155 ~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s  231 (320)
                      .+. .|     ..+   .-++.+. ..--|.-..-.++++.=+.+..-|.|-++|+. +..++.+......-....++..
T Consensus       181 ~DP-~i-----PagyAPFnIqnig-~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~A  252 (336)
T TIGR03118       181 IDP-AL-----PAGYAPFNVQNLG-GTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIA  252 (336)
T ss_pred             cCC-CC-----CCCCCCcceEEEC-CeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeC
Confidence            000 00     000   0000000 00012223334444444556667889999876 4455444333322222333333


Q ss_pred             ------cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC------CceeEEEECcC------CCeEEEecC
Q psy14961        232 ------VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE------NRVSCLQVSPD------GTAFSSGSW  284 (320)
Q Consensus       232 ------~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~------~~i~~i~~s~~------~~~l~s~s~  284 (320)
                            ..|.+|+.-.-||+|..||..++..+.++....      +.++.|+|-..      +.++++++-
T Consensus       253 Pa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGng~~~~~~ntLyFaAGp  323 (336)
T TIGR03118       253 PESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGNGVSGGSANYLYFTAGP  323 (336)
T ss_pred             hhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCCCcCCCCcceEEEEeCC
Confidence                  246666666689999999998888777776433      35788888762      345555553

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=95.00  E-value=2.4  Score=37.50  Aligned_cols=282  Identities=15%  Similarity=0.123  Sum_probs=113.6

Q ss_pred             ecccceeEEEEEeCc-----cceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          5 DGLTQTKEHSVTMPA-----TWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         5 ~~~~~~~~~~~~~~~-----~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |..|+....+++-+.     .+-+.=+|.+||+ +|+++..||.-.+|-+++........... ...... ....++++.
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg-~g~~~~-g~~~s~~~~   93 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDG-PGDNTF-GGFLSPDDR   93 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---S-S-B-TT-T-EE-TTSS
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccC-CCCCcc-ceEEecCCC
Confidence            455666655544221     1222235788886 55666678887777776543322221111 111111 122345556


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC----------------------CCeEEEE
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS----------------------DKLVNIW  136 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~----------------------dg~i~lw  136 (320)
                      .++-...+..++-.|+++.+....+......+-...+.+..++..++-.-.                      ...|.--
T Consensus        94 ~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~i  173 (386)
T PF14583_consen   94 ALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTI  173 (386)
T ss_dssp             EEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEE
T ss_pred             eEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEE
Confidence            655444556888889988776555555555554455655556655432211                      1123334


Q ss_pred             eCCCCcEEEEecc-----CCcc-------c--cC----CC-eEEEEECcC-CeeeeeecCCC--CCeEEEEEcCCCCEEE
Q psy14961        137 DMRTGYCVQSFEG-----HHNL-------I--TD----DK-LVNIWDMRT-GYCVQSFEGHQ--SDVNSVKFHPSGDAVA  194 (320)
Q Consensus       137 d~~~~~~~~~~~~-----~~~~-------~--~~----d~-~i~iwd~~~-~~~~~~~~~~~--~~v~~v~~~p~g~~l~  194 (320)
                      |+.+|+....+..     |...       +  +.    +. .-++|-+++ +.....+..|.  ..+..=-|.|+|..+.
T Consensus       174 dl~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~  253 (386)
T PF14583_consen  174 DLKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIW  253 (386)
T ss_dssp             ETTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EE
T ss_pred             ECCCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEE
Confidence            5566553332221     1110       0  00    11 124454432 22222222222  2334455788988653


Q ss_pred             E--e---eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC----------------eEEEEcCCC
Q psy14961        195 T--G---SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY----------------TINVWDSLK  253 (320)
Q Consensus       195 s--~---s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg----------------~v~~wd~~~  253 (320)
                      -  .   +.+..|.-+|+.+++.......+.    ..-.-.++||++++.=+.|.                -|.+++...
T Consensus       254 y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p~----~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~  329 (386)
T PF14583_consen  254 YDSYTPGGQDFWIAGYDPDTGERRRLMEMPW----CSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEA  329 (386)
T ss_dssp             EEEEETTT--EEEEEE-TTT--EEEEEEE-S----EEEEEE-TTSSEEEEEE-------------------EEEEEETTT
T ss_pred             EEeecCCCCceEEEeeCCCCCCceEEEeCCc----eeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEecccc
Confidence            2  2   224467777888775543332221    22344568888876644432                344566655


Q ss_pred             CeEEEEeecCC---------Cc--eeEEEECcCCCe-EEEecCCCceEeeec
Q psy14961        254 CCRVNHLMGHE---------NR--VSCLQVSPDGTA-FSSGSWDTTLRDEES  293 (320)
Q Consensus       254 ~~~~~~~~~h~---------~~--i~~i~~s~~~~~-l~s~s~D~~ir~~~~  293 (320)
                      +... .+..|.         ..  =-...|||||++ |.++...|..-++..
T Consensus       330 ~~~~-~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v  380 (386)
T PF14583_consen  330 GRFR-KLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV  380 (386)
T ss_dssp             TEEE-EEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred             Ccee-eeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence            4332 122221         11  146799999997 556667777766654

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=94.97  E-value=2.6  Score=37.81  Aligned_cols=212  Identities=12%  Similarity=0.139  Sum_probs=85.0

Q ss_pred             CCCEEEEec-CCCeEEEEEecccCCcccccccccc---cc-cCeE---EEEecCCCCEEEEEeC------CCeEEEEECC
Q psy14961         30 SGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVAT---HT-SFIS---CCIFPNSDQQILTGSG------DCTCALWDVE   95 (320)
Q Consensus        30 ~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~---h~-~~v~---~~~~~~~~~~l~s~~~------dg~v~iwd~~   95 (320)
                      +-++|+..+ .++.|.|+|+..+.......+.+..   +. ..+.   ..-..++|+.++++-.      -|.+.+.|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            344666555 6788999988643322222222221   11 0111   1222456777776422      2567778877


Q ss_pred             CcceeeecccCcc-ceeEEEEeeCCCCCEEEEEeC--------------------CCeEEEEeCCCCcEEEEeccCC-cc
Q psy14961         96 SSQLLQSFHGHTG-ELMDLDLAPSETGNTFVSGSS--------------------DKLVNIWDMRTGYCVQSFEGHH-NL  153 (320)
Q Consensus        96 ~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~s~~~--------------------dg~i~lwd~~~~~~~~~~~~~~-~~  153 (320)
                      +......+....+ .-..-.|-..+..+.++|+.+                    -..+.+||+...+.+++++--. ..
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            7666655543222 222223333334456666653                    2469999999988887764211 00


Q ss_pred             -----------------cc--CCCeE-EEEECcCCe----eeeeecC-----------------CCCCeEEEEEcCCCCE
Q psy14961        154 -----------------IT--DDKLV-NIWDMRTGY----CVQSFEG-----------------HQSDVNSVKFHPSGDA  192 (320)
Q Consensus       154 -----------------~~--~d~~i-~iwd~~~~~----~~~~~~~-----------------~~~~v~~v~~~p~g~~  192 (320)
                                       +.  -...| ++|..+.+.    .+.++..                 -..-|+.|.+|.|.++
T Consensus       246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf  325 (461)
T PF05694_consen  246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF  325 (461)
T ss_dssp             EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred             ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence                             00  01122 222222221    1111211                 1235789999999998


Q ss_pred             EE-EeeCCCeEEEEECCCCe---eEeEEecC--------------cceeeeEEEEEecCCcEEEEEe
Q psy14961        193 VA-TGSDDATCRLFDLRADK---EVACYKKD--------------SILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       193 l~-s~s~dg~i~iwd~~~~~---~~~~~~~~--------------~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                      |. ++=..|.++.||+....   .+......              ....+..-+..|.||+.|+..+
T Consensus       326 LYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  326 LYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             EEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             EEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence            85 45579999999986532   22111100              0011235577889999887654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=94.87  E-value=2.1  Score=36.17  Aligned_cols=228  Identities=12%  Similarity=0.091  Sum_probs=108.7

Q ss_pred             CCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec-----
Q psy14961         29 PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF-----  103 (320)
Q Consensus        29 ~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----  103 (320)
                      ..++.|+.|..+| +.+++.......    ... .+...|..+...++-+.+++-+ |+.+.++++..-......     
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~----~~i-~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~   77 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKP----TRI-LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAF   77 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccc----eeE-eecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccc
Confidence            4567888898888 888887211111    111 1223377777766666665544 699999998654332210     


Q ss_pred             ---------ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCC-eeeee
Q psy14961        104 ---------HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG-YCVQS  173 (320)
Q Consensus       104 ---------~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~-~~~~~  173 (320)
                               ......+...+......+...+.......|.+|.......                       .. .....
T Consensus        78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~-----------------------~f~~~~ke  134 (275)
T PF00780_consen   78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRN-----------------------SFSKLLKE  134 (275)
T ss_pred             cccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcc-----------------------cccceeEE
Confidence                     0011122222100112233333333344555555432100                       00 12222


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce---------eeeEEEEEecCCcEEEEEeCCC
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL---------FGATSVDFSVSGRLLFAGYNDY  244 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~~l~~g~~dg  244 (320)
                      +. -...+.+++|.  ++.++.|..+ ...+.|+.++............         .....+.--+++.+|++ .++ 
T Consensus       135 ~~-lp~~~~~i~~~--~~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~-~~~-  208 (275)
T PF00780_consen  135 IS-LPDPPSSIAFL--GNKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC-YDN-  208 (275)
T ss_pred             EE-cCCCcEEEEEe--CCEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE-ecc-
Confidence            22 23567889998  4567777655 4788898866544333211100         01112222234555554 322 


Q ss_pred             eEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        245 TINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       245 ~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .-.+.|. .+.+.+ ....=.....++++..  .+|+..+. +.|-+++..+.
T Consensus       209 ~g~fv~~-~G~~~r~~~i~W~~~p~~~~~~~--pyli~~~~-~~iEV~~~~~~  257 (275)
T PF00780_consen  209 IGVFVNK-NGEPSRKSTIQWSSAPQSVAYSS--PYLIAFSS-NSIEVRSLETG  257 (275)
T ss_pred             eEEEEcC-CCCcCcccEEEcCCchhEEEEEC--CEEEEECC-CEEEEEECcCC
Confidence            2222332 232222 1111133455666643  36665555 55999986544

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=94.84  E-value=0.58  Score=40.33  Aligned_cols=104  Identities=10%  Similarity=0.095  Sum_probs=60.0

Q ss_pred             EEEEEcCCCCEEEEec-CCCeEEEEEecccCCc-ccc--cccccccccCeEEEEecCCCCEEEEEeCCC-eEEEEECCCc
Q psy14961         23 MACAYAPSGSVVASGG-LDNKVTVYAIALEDDS-SAK--KKTVATHTSFISCCIFPNSDQQILTGSGDC-TCALWDVESS   97 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~-~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~   97 (320)
                      +.++||||++.+..+- ..+.|.-|+++...-. ...  ...+....+.-..+....++.+.+++-.+| .|..|+.+ +
T Consensus       166 NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G  244 (307)
T COG3386         166 NGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-G  244 (307)
T ss_pred             CceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-C
Confidence            4799999998666664 4477777776521111 010  011111223333444555666554554444 89999988 8


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEe
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGS  128 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~  128 (320)
                      +++..+..+...+.+++|.- ++.+.|++.+
T Consensus       245 ~l~~~i~lP~~~~t~~~FgG-~~~~~L~iTs  274 (307)
T COG3386         245 KLLGEIKLPVKRPTNPAFGG-PDLNTLYITS  274 (307)
T ss_pred             cEEEEEECCCCCCccceEeC-CCcCEEEEEe
Confidence            88877766656677777753 3345555443

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=94.81  E-value=1.2  Score=42.54  Aligned_cols=114  Identities=11%  Similarity=0.033  Sum_probs=72.6

Q ss_pred             CeEEEEEcC--CCCEEEEeeCCCeEEEEECCC-------C----eeEe---E---EecCcceeeeEEEEEe--cCCcEEE
Q psy14961        180 DVNSVKFHP--SGDAVATGSDDATCRLFDLRA-------D----KEVA---C---YKKDSILFGATSVDFS--VSGRLLF  238 (320)
Q Consensus       180 ~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~-------~----~~~~---~---~~~~~~~~~~~~~~~s--~~~~~l~  238 (320)
                      .|+-|....  ....|+.|..||.|.+|....       .    ....   .   +-.......+..++++  ...++||
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEE
Confidence            566666654  346789999999999996521       0    0000   0   0001111245678888  7888999


Q ss_pred             EEeCCCeEEEEcCCC--Ce-EEEEeecCCCceeEEEECcCC---C---eEEEecCCCceEeeec
Q psy14961        239 AGYNDYTINVWDSLK--CC-RVNHLMGHENRVSCLQVSPDG---T---AFSSGSWDTTLRDEES  293 (320)
Q Consensus       239 ~g~~dg~v~~wd~~~--~~-~~~~~~~h~~~i~~i~~s~~~---~---~l~s~s~D~~ir~~~~  293 (320)
                      ++++...|.+|-...  .+ ....-..|...|.+|+|-++.   .   .+++++-.|.+.+++.
T Consensus       182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            999999888874322  11 111112356678899998753   2   7888999999988776

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=94.55  E-value=2.4  Score=35.44  Aligned_cols=169  Identities=14%  Similarity=0.181  Sum_probs=94.3

Q ss_pred             CccceEEEEEcCCCCEEEEecCCC--eEEEEEecccCCccccccccccc--ccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDN--KVTVYAIALEDDSSAKKKTVATH--TSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg--~i~v~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      +..+...+.|..+|.++-+.|.-|  .|+.+|+...  .......+...  ...++.  +  ++....-.-.++...+||
T Consensus        43 ~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg--~~~~~~~l~~~~FgEGit~--~--~d~l~qLTWk~~~~f~yd  116 (264)
T PF05096_consen   43 PTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETG--KVLQSVPLPPRYFGEGITI--L--GDKLYQLTWKEGTGFVYD  116 (264)
T ss_dssp             TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTS--SEEEEEE-TTT--EEEEEE--E--TTEEEEEESSSSEEEEEE
T ss_pred             CcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCC--cEEEEEECCccccceeEEE--E--CCEEEEEEecCCeEEEEc
Confidence            345677888988888888888777  4556655322  11111222211  111111  1  233444455688999999


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC--ccc-------c---------
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH--NLI-------T---------  155 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~--~~~-------~---------  155 (320)
                      .++.+.+..+.. .++-+.++.    +++.|+.+.....+..+|..+.+....++-..  ..+       .         
T Consensus       117 ~~tl~~~~~~~y-~~EGWGLt~----dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANV  191 (264)
T PF05096_consen  117 PNTLKKIGTFPY-PGEGWGLTS----DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANV  191 (264)
T ss_dssp             TTTTEEEEEEE--SSS--EEEE----CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEE
T ss_pred             cccceEEEEEec-CCcceEEEc----CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEe
Confidence            999888887763 456677762    46677777777789999987766554432110  000       0         


Q ss_pred             -CCCeEEEEECcCCeeeeeec------------CC---CCCeEEEEEcCCCCEEEEee
Q psy14961        156 -DDKLVNIWDMRTGYCVQSFE------------GH---QSDVNSVKFHPSGDAVATGS  197 (320)
Q Consensus       156 -~d~~i~iwd~~~~~~~~~~~------------~~---~~~v~~v~~~p~g~~l~s~s  197 (320)
                       ....|...|..+|+.+..+.            .+   ..-.+.||++|..+.|...+
T Consensus       192 W~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  192 WQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             TTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             CCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence             13345556777877655331            01   23578999999877765555

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.23  E-value=3.7  Score=36.28  Aligned_cols=247  Identities=14%  Similarity=0.092  Sum_probs=121.2

Q ss_pred             cCCCCEEEEe---------cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         28 APSGSVVASG---------GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        28 ~~~~~~l~s~---------~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      |||+++++..         +..+.+.+||+...     ....+......+....|+|+++.++... ++.|.+++..++.
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~-----~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~   74 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETG-----EITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQ   74 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTT-----EEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCC-----ceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCC
Confidence            5777777763         22467788887532     1122222245677889999998888775 6789999887664


Q ss_pred             eeee-ccc-------C---------ccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeC---CCCc----EEEEeccCCcc
Q psy14961         99 LLQS-FHG-------H---------TGELMDLDLAPSETGNTFVSGSS-DKLVNIWDM---RTGY----CVQSFEGHHNL  153 (320)
Q Consensus        99 ~~~~-~~~-------~---------~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~---~~~~----~~~~~~~~~~~  153 (320)
                      ..+. ..+       -         -+.-..+-|  +|+|+.|+.... +..++.+.+   ....    .+..+. ....
T Consensus        75 ~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~W--Spd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~-YPk~  151 (353)
T PF00930_consen   75 ETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWW--SPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIR-YPKA  151 (353)
T ss_dssp             EEESES--TTTEEESB--HHHHHHTSSSSBSEEE---TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE---BT
T ss_pred             eEEeccccceeEEcCccceeccccccccccceEE--CCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccc-cCCC
Confidence            4321 111       0         011122334  567888876543 333443332   1111    111111 0111


Q ss_pred             cc--CCCeEEEEECcCCeeee-ee----cCCCCCeEEEEEcCCCCEEEE--eeCCC---eEEEEECCCCeeEeEEecCcc
Q psy14961        154 IT--DDKLVNIWDMRTGYCVQ-SF----EGHQSDVNSVKFHPSGDAVAT--GSDDA---TCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       154 ~~--~d~~i~iwd~~~~~~~~-~~----~~~~~~v~~v~~~p~g~~l~s--~s~dg---~i~iwd~~~~~~~~~~~~~~~  221 (320)
                      ..  ..-.+.++|+.+++... ..    ..-..-+..+.|.++++.|+.  .+++.   .+.+.|..++...........
T Consensus       152 G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~  231 (353)
T PF00930_consen  152 GDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSD  231 (353)
T ss_dssp             TS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESS
T ss_pred             CCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCC
Confidence            11  22345668888776432 11    123446889999999884433  33332   466667766544322221111


Q ss_pred             --eeeeEEEEEe-cCCc-EEEEEeCCCeEEE--EcCCCCeEEEEeecCCCcee-EEEECcCCCe-EEEecC
Q psy14961        222 --LFGATSVDFS-VSGR-LLFAGYNDYTINV--WDSLKCCRVNHLMGHENRVS-CLQVSPDGTA-FSSGSW  284 (320)
Q Consensus       222 --~~~~~~~~~s-~~~~-~l~~g~~dg~v~~--wd~~~~~~~~~~~~h~~~i~-~i~~s~~~~~-l~s~s~  284 (320)
                        +-......|. +++. +|.....+|--+|  ++...+. ...+....-.|. -+.++++++. +++|..
T Consensus       232 ~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~  301 (353)
T PF00930_consen  232 GWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANG  301 (353)
T ss_dssp             SSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESS
T ss_pred             cceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecC
Confidence              1111234444 5555 5555556775555  4555544 334444444564 4678887554 445554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=94.10  E-value=5.2  Score=37.53  Aligned_cols=47  Identities=17%  Similarity=0.243  Sum_probs=30.1

Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce-eEEEECcCCCeE
Q psy14961        233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV-SCLQVSPDGTAF  279 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i-~~i~~s~~~~~l  279 (320)
                      .+.+++.++.+|.++.+|..+++.+-+..-..... .=+.|..+|++.
T Consensus       471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~~G~qY  518 (527)
T TIGR03075       471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQDGKQY  518 (527)
T ss_pred             CCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEeCCEEE
Confidence            45577778889999999999998886554322111 223334466653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=93.83  E-value=2.1  Score=36.84  Aligned_cols=108  Identities=18%  Similarity=0.152  Sum_probs=57.9

Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC-CCCeEE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS-LKCCRV  257 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~-~~~~~~  257 (320)
                      ..+..+.-+++|.+++.++......-||.-.. .-..+.... ...+.++.|+|++.+.+++ ..|.|++=+. .....-
T Consensus       145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~r~~-~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w  221 (302)
T PF14870_consen  145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHNRNS-SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETW  221 (302)
T ss_dssp             --EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE--S-SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE
T ss_pred             ceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEEccCc-cceehhceecCCCCEEEEe-CCcEEEEccCCCCcccc
Confidence            46778888999998888877777778875422 111121111 1235788999998876654 7888887651 111111


Q ss_pred             EE-eec---CCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        258 NH-LMG---HENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       258 ~~-~~~---h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      .. +.+   -.-.+..++|.+++...|+|+....++
T Consensus       222 ~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~  257 (302)
T PF14870_consen  222 SEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLV  257 (302)
T ss_dssp             ---B-TTSS--S-EEEEEESSSS-EEEEESTT-EEE
T ss_pred             ccccCCcccCceeeEEEEecCCCCEEEEeCCccEEE
Confidence            11 111   122489999999998888877655555

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=93.70  E-value=5.1  Score=36.04  Aligned_cols=238  Identities=16%  Similarity=0.174  Sum_probs=101.9

Q ss_pred             CCEEEEEe-CCCeEEEEECCC----cceeeeccc---C--ccceeEEEEeeCCCCCEEEEEe--CC----CeEEEEeCCC
Q psy14961         77 DQQILTGS-GDCTCALWDVES----SQLLQSFHG---H--TGELMDLDLAPSETGNTFVSGS--SD----KLVNIWDMRT  140 (320)
Q Consensus        77 ~~~l~s~~-~dg~v~iwd~~~----~~~~~~~~~---~--~~~v~~~~~~~~~~~~~l~s~~--~d----g~i~lwd~~~  140 (320)
                      -++|+..+ ....|.|.|+.+    .++.+.+..   +  .+-..--.+++-++|+.++|+-  .+    |-+.+.|-.+
T Consensus        87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t  166 (461)
T PF05694_consen   87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET  166 (461)
T ss_dssp             S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred             CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence            34565555 788999999864    233333321   1  1111222345566787777642  22    3466777665


Q ss_pred             CcEEEEecc---------------CCc-ccc----------------------CCCeEEEEECcCCeeeeeecCCCC--C
Q psy14961        141 GYCVQSFEG---------------HHN-LIT----------------------DDKLVNIWDMRTGYCVQSFEGHQS--D  180 (320)
Q Consensus       141 ~~~~~~~~~---------------~~~-~~~----------------------~d~~i~iwd~~~~~~~~~~~~~~~--~  180 (320)
                      ......++.               .++ .++                      ....+.+||+.+.+.++++.--..  -
T Consensus       167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~  246 (461)
T PF05694_consen  167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQM  246 (461)
T ss_dssp             --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEE
T ss_pred             ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCc
Confidence            444433221               111 111                      246799999999999988753321  2


Q ss_pred             eEEEEEc--CCCCE-EEEeeCCCeEEEEEC-CCCe----eEeEEecC--------cc-------eeeeEEEEEecCCcEE
Q psy14961        181 VNSVKFH--PSGDA-VATGSDDATCRLFDL-RADK----EVACYKKD--------SI-------LFGATSVDFSVSGRLL  237 (320)
Q Consensus       181 v~~v~~~--p~g~~-l~s~s~dg~i~iwd~-~~~~----~~~~~~~~--------~~-------~~~~~~~~~s~~~~~l  237 (320)
                      ...|.|.  |+..+ ++.+.-.++|..|-- ..++    .+..++..        ..       ..-++.+.+|.|.++|
T Consensus       247 pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfL  326 (461)
T PF05694_consen  247 PLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFL  326 (461)
T ss_dssp             EEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EE
T ss_pred             eEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEE
Confidence            4466664  44444 444444555555532 2221    11111111        00       1125788899999999


Q ss_pred             EEEe-CCCeEEEEcCCC---CeEEEEee-c-------C--------CCceeEEEECcCCCeEEEecCCCceEeeecchH-
Q psy14961        238 FAGY-NDYTINVWDSLK---CCRVNHLM-G-------H--------ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR-  296 (320)
Q Consensus       238 ~~g~-~dg~v~~wd~~~---~~~~~~~~-~-------h--------~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~-  296 (320)
                      ...+ .+|.|+.||+..   .+...+.. +       |        .+...-|..|-||+.|...+  ....-||.... 
T Consensus       327 Yvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn--SLys~WD~qfYP  404 (461)
T PF05694_consen  327 YVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN--SLYSAWDKQFYP  404 (461)
T ss_dssp             EEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE------HHHHHHHST
T ss_pred             EEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe--ecccccccccCC
Confidence            7765 799999999764   23333221 1       1        12346678888888765543  33345554211 


Q ss_pred             ----hhhheeeeeeecCCcceEEE
Q psy14961        297 ----YVQYLLRSRITKPTQGLTVY  316 (320)
Q Consensus       297 ----~~~~~~~~~~~~~~~~~~~~  316 (320)
                          .-++++.-+....+-|++++
T Consensus       405 ~~~~~g~~m~~iDvd~~~Ggl~l~  428 (461)
T PF05694_consen  405 DGVKNGSWMLKIDVDTENGGLTLD  428 (461)
T ss_dssp             T------EEEEEEE-TT-S-EEEE
T ss_pred             CccccccEEEEEEecCCCCceeeC
Confidence                11345665666666677765

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.33  E-value=4.4  Score=34.27  Aligned_cols=218  Identities=17%  Similarity=0.198  Sum_probs=117.3

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCccee--eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLL--QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV  144 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~  144 (320)
                      ...|.+|.....+...+.+.  .-+|..+-...+  +.+.+-...+.++.+.|  +.+.|.+....+.-.++=-..|+.+
T Consensus        45 ~f~~a~~k~~~~~~~~~~r~--~~~~l~~y~~~i~akpi~g~~~nvS~LTynp--~~rtLFav~n~p~~iVElt~~Gdli  120 (316)
T COG3204          45 VFPCAWFKAGQTNGLDLSRY--IARYLLEYRARIDAKPILGETANVSSLTYNP--DTRTLFAVTNKPAAIVELTKEGDLI  120 (316)
T ss_pred             eeeeEEEeccccccccccch--hhhccCCceEEEeccccccccccccceeeCC--CcceEEEecCCCceEEEEecCCceE
Confidence            34555665433233333333  444544322111  11234455577787755  4567777766666556655556655


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec------
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK------  218 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~------  218 (320)
                      +++.-                         .+. ..-..+.+..+|.+.++--++..+.++.+...........      
T Consensus       121 rtiPL-------------------------~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~  174 (316)
T COG3204         121 RTIPL-------------------------TGF-SDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLG  174 (316)
T ss_pred             EEecc-------------------------ccc-CChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEecc
Confidence            54321                         111 1123466666666666666677888877665433221111      


Q ss_pred             --CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe-E--EEEeecCC-------CceeEEEECc-CCCeEEEecCC
Q psy14961        219 --DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-R--VNHLMGHE-------NRVSCLQVSP-DGTAFSSGSWD  285 (320)
Q Consensus       219 --~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~-~--~~~~~~h~-------~~i~~i~~s~-~~~~l~s~s~D  285 (320)
                        .+...+...++++|....|..+=+..-+.||...... .  ......+.       ..|+++.|++ .+.+|+-+..+
T Consensus       175 ~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ES  254 (316)
T COG3204         175 TTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDES  254 (316)
T ss_pred             ccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCC
Confidence              1112355779999999999998888777777644221 1  11111222       3478899997 56677777777


Q ss_pred             CceEeeecchHhhhheeeeeeecCCcceEEEe
Q psy14961        286 TTLRDEESKNRYVQYLLRSRITKPTQGLTVYF  317 (320)
Q Consensus       286 ~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (320)
                      +.+..-+....-.   ..-.+++...|++..+
T Consensus       255 r~l~Evd~~G~~~---~~lsL~~g~~gL~~di  283 (316)
T COG3204         255 RRLLEVDLSGEVI---ELLSLTKGNHGLSSDI  283 (316)
T ss_pred             ceEEEEecCCCee---eeEEeccCCCCCcccC
Confidence            7776666433211   1123455555555544

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=93.31  E-value=6.4  Score=38.28  Aligned_cols=74  Identities=18%  Similarity=0.280  Sum_probs=49.5

Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-----------eeEeEE--ec------CcceeeeEEEEEecC---CcE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-----------KEVACY--KK------DSILFGATSVDFSVS---GRL  236 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-----------~~~~~~--~~------~~~~~~~~~~~~s~~---~~~  236 (320)
                      -.|..|.++|+|..++..|..| |.|-.+...           ..+.+.  .-      ......+..+.|+|.   +..
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            3689999999999998888765 444444321           111111  10      011124668999987   478


Q ss_pred             EEEEeCCCeEEEEcCCC
Q psy14961        237 LFAGYNDYTINVWDSLK  253 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~  253 (320)
                      |++=++|+++++||...
T Consensus       164 l~vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISD  180 (717)
T ss_pred             EEEEecCCEEEEEecCC
Confidence            99999999999999764

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=93.07  E-value=2.9  Score=40.59  Aligned_cols=76  Identities=13%  Similarity=0.050  Sum_probs=52.9

Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEEcC-----C----CCeE---EEEe--------ecCCCceeEEEECcC---CC
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVWDS-----L----KCCR---VNHL--------MGHENRVSCLQVSPD---GT  277 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~-----~----~~~~---~~~~--------~~h~~~i~~i~~s~~---~~  277 (320)
                      ..+.+..+.++|+|++||..+..|.+.+.=.     .    .+..   .++.        ..+...|..+.|+|.   +.
T Consensus        83 ~~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   83 PLFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             CceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            3456788999999999999988775444211     1    0111   1111        134568999999996   57


Q ss_pred             eEEEecCCCceEeeecchH
Q psy14961        278 AFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       278 ~l~s~s~D~~ir~~~~~~~  296 (320)
                      .|+.-..|+++|+|+....
T Consensus       163 ~l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             eEEEEecCCEEEEEecCCC
Confidence            8999999999999997443

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=92.97  E-value=1.8  Score=38.85  Aligned_cols=43  Identities=12%  Similarity=0.038  Sum_probs=35.2

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      .+.++..+|.+++.++...-|.|.++|+.++..++.+++..+.
T Consensus       309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA  351 (415)
T PF14655_consen  309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA  351 (415)
T ss_pred             eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc
Confidence            3556777888888888777899999999999999988887654

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=92.92  E-value=2.3  Score=38.23  Aligned_cols=88  Identities=18%  Similarity=0.161  Sum_probs=53.5

Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-eeeEEEEE--------------ecC-CcE-
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-FGATSVDF--------------SVS-GRL-  236 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~--------------s~~-~~~-  236 (320)
                      +......+.+++.+|++.+.|+...=|.|.++|+..+..+..++..... ++-..+.-              .+. ..+ 
T Consensus       303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L  382 (415)
T PF14655_consen  303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFL  382 (415)
T ss_pred             eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEE
Confidence            4445567899999999887777767789999999887665544432211 00000000              000 112 


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      ++-.-.-|.|.+|.++.+.++..+.
T Consensus       383 vIyaprRg~lEvW~~~~g~Rv~a~~  407 (415)
T PF14655_consen  383 VIYAPRRGILEVWSMRQGPRVAAFN  407 (415)
T ss_pred             EEEeccCCeEEEEecCCCCEEEEEE
Confidence            2334467889999888877776553

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=92.88  E-value=0.54  Score=27.11  Aligned_cols=30  Identities=27%  Similarity=0.433  Sum_probs=24.5

Q ss_pred             CeEEEEEcCCC---CEEEEeeCCCeEEEEECCC
Q psy14961        180 DVNSVKFHPSG---DAVATGSDDATCRLFDLRA  209 (320)
Q Consensus       180 ~v~~v~~~p~g---~~l~s~s~dg~i~iwd~~~  209 (320)
                      .|.++.|+|..   +.|+-+-.-|.+.++|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            57899999854   4777777788999999985

It contains a characteristic DLL sequence motif.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=92.44  E-value=12  Score=36.85  Aligned_cols=183  Identities=14%  Similarity=0.128  Sum_probs=107.0

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccc--------eeEEEEee--------------CCCCCEEEEEeCCCeEE
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGE--------LMDLDLAP--------------SETGNTFVSGSSDKLVN  134 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~--------------~~~~~~l~s~~~dg~i~  134 (320)
                      +..++.++.++.|.-.|..+++.+..+......        ...+.+..              ...+..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            457888888899999999999888776532211        11222221              12345888999999999


Q ss_pred             EEeCCCCcEEEEeccCC----------------------------cccc-----------CCCeEEEEECcCCeeeeeec
Q psy14961        135 IWDMRTGYCVQSFEGHH----------------------------NLIT-----------DDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus       135 lwd~~~~~~~~~~~~~~----------------------------~~~~-----------~d~~i~iwd~~~~~~~~~~~  175 (320)
                      -.|..+|+.+..+....                            .++.           .++.|+-+|.++|+.+-.+.
T Consensus       274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~  353 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWD  353 (764)
T ss_pred             EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEe
Confidence            99999998775542110                            0000           14678889999998776543


Q ss_pred             CC---------CC--------Ce-EEEEEcCCCCEEEEeeC------------------CCeEEEEECCCCeeEeEEecC
Q psy14961        176 GH---------QS--------DV-NSVKFHPSGDAVATGSD------------------DATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       176 ~~---------~~--------~v-~~v~~~p~g~~l~s~s~------------------dg~i~iwd~~~~~~~~~~~~~  219 (320)
                      .-         ..        .+ ..++++|....++.+..                  .+.|.=.|.++++..-.++..
T Consensus       354 ~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~~  433 (764)
T TIGR03074       354 PGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTV  433 (764)
T ss_pred             cCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEeccc
Confidence            10         00        01 23455555444443221                  233444566666654333321


Q ss_pred             c-------ceeeeEEEEEec-CCc---EEEEEeCCCeEEEEcCCCCeEEEE
Q psy14961        220 S-------ILFGATSVDFSV-SGR---LLFAGYNDYTINVWDSLKCCRVNH  259 (320)
Q Consensus       220 ~-------~~~~~~~~~~s~-~~~---~l~~g~~dg~v~~wd~~~~~~~~~  259 (320)
                      .       ......-+.+.. +|+   .++.++.+|.+.+.|..+++++..
T Consensus       434 ~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~  484 (764)
T TIGR03074       434 HHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP  484 (764)
T ss_pred             CCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence            1       000112223333 563   788899999999999988877643

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=92.36  E-value=4.9  Score=32.27  Aligned_cols=159  Identities=13%  Similarity=0.118  Sum_probs=72.9

Q ss_pred             CCCEEEEEeCCC--eEEEEeCCCCcEEEEeccC-Ccccc---------------CCCeEEEEECcCCeeeeeecCCCCCe
Q psy14961        120 TGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGH-HNLIT---------------DDKLVNIWDMRTGYCVQSFEGHQSDV  181 (320)
Q Consensus       120 ~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~-~~~~~---------------~d~~i~iwd~~~~~~~~~~~~~~~~v  181 (320)
                      +|+.+.+.+.-|  .|++||+.+|+.+.+-.-. .....               .++.-..+|.++-+++..+... ++-
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~-GeG  133 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYE-GEG  133 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccC-Ccc
Confidence            345555655543  5999999988876543222 11111               2344455566555554443221 122


Q ss_pred             EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE---eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961        182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEV---ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN  258 (320)
Q Consensus       182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~  258 (320)
                      ..+  ..+++.|+.+....++..-|..+-...   ........+-....+.+- +|...|--..+..|..-|..+++.+.
T Consensus       134 WgL--t~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~  210 (262)
T COG3823         134 WGL--TSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVA  210 (262)
T ss_pred             eee--ecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEE
Confidence            222  234555665555556666665432211   111111011111112211 34333333333233333333333332


Q ss_pred             Ee------------ecCCCceeEEEECcCC-CeEEEe
Q psy14961        259 HL------------MGHENRVSCLQVSPDG-TAFSSG  282 (320)
Q Consensus       259 ~~------------~~h~~~i~~i~~s~~~-~~l~s~  282 (320)
                      .+            ..|.+..+.||+-|++ +++++|
T Consensus       211 widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         211 WIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             EEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            22            2456678999999976 566665

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.95  E-value=6.9  Score=33.06  Aligned_cols=206  Identities=13%  Similarity=0.117  Sum_probs=105.6

Q ss_pred             EecCCCCEEEEEeCC-----CeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE-eCCCCcEE
Q psy14961         72 IFPNSDQQILTGSGD-----CTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-DMRTGYCV  144 (320)
Q Consensus        72 ~~~~~~~~l~s~~~d-----g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw-d~~~~~~~  144 (320)
                      .|+++|.+|++.-+|     |.|=|||...+ +.+..+..|.-.-..+.+  ..||..++.+.  |-|..- |.  ++..
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~l--m~DGrtlvvan--GGIethpdf--gR~~  193 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTL--MADGRTLVVAN--GGIETHPDF--GRTE  193 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEE--ecCCcEEEEeC--Cceeccccc--Cccc
Confidence            578999988876443     78889998643 445566666655566655  44688877664  334322 11  0000


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeee--ec--CCCCCeEEEEEcCCCCEEEEeeCCCeE-----EEEECCCCeeEeE
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQS--FE--GHQSDVNSVKFHPSGDAVATGSDDATC-----RLFDLRADKEVAC  215 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~--~~--~~~~~v~~v~~~p~g~~l~s~s~dg~i-----~iwd~~~~~~~~~  215 (320)
                      .      ++-+=.-.+.+.|..++..+.+  +.  .+.-.|..++..++|..++.+-..|.-     .+=-...++++..
T Consensus       194 l------NldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~  267 (366)
T COG3490         194 L------NLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEF  267 (366)
T ss_pred             c------chhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcc
Confidence            0      0001112334445555554433  22  344568888888888765544322211     1111112222222


Q ss_pred             EecCcce-----eeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        216 YKKDSIL-----FGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       216 ~~~~~~~-----~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      +......     .-+.+++.+.+..+++..+ ..+...+||..++..+..-  .--....++  +...-|+..|.+|.|+
T Consensus       268 ~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a--~l~daaGva--~~~~gf~vssg~G~~~  343 (366)
T COG3490         268 LDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEA--ALPDAAGVA--AAKGGFAVSSGQGRII  343 (366)
T ss_pred             cCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecc--cccccccce--eccCceEEecCCceEE
Confidence            2111100     0134566665555554444 5567788999988666321  111122333  3334467777788888


Q ss_pred             eeec
Q psy14961        290 DEES  293 (320)
Q Consensus       290 ~~~~  293 (320)
                      ++..
T Consensus       344 ~~s~  347 (366)
T COG3490         344 FYSR  347 (366)
T ss_pred             eccc
Confidence            7753

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=91.80  E-value=8  Score=36.80  Aligned_cols=107  Identities=12%  Similarity=0.048  Sum_probs=61.8

Q ss_pred             EEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE--ecCCcEEEEEeCCCeEEEEcCC-----C--
Q psy14961        183 SVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF--SVSGRLLFAGYNDYTINVWDSL-----K--  253 (320)
Q Consensus       183 ~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~l~~g~~dg~v~~wd~~-----~--  253 (320)
                      -+.-+.-++..+.-+...++.|||.+.+........ ...-.+..++|  .|+|+.+++-+-...|.+|--.     .  
T Consensus        34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~  112 (631)
T PF12234_consen   34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKG  112 (631)
T ss_pred             eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCC
Confidence            344444444444444455799999988763322111 11112345555  4788877776667788887321     1  


Q ss_pred             --CeEEEE--eecCC-CceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        254 --CCRVNH--LMGHE-NRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       254 --~~~~~~--~~~h~-~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                        ..++..  +..|+ .+|.+..|-+||.+++.+|  ..+.+++
T Consensus       113 p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d  154 (631)
T PF12234_consen  113 PSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD  154 (631)
T ss_pred             cccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence              112222  23555 5899999999998877665  3444444

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=91.79  E-value=6.3  Score=34.48  Aligned_cols=105  Identities=16%  Similarity=0.166  Sum_probs=54.5

Q ss_pred             eEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---EeEEec--CcceeeeEEEEEecC---CcEEEEEeCC---------
Q psy14961        181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKE---VACYKK--DSILFGATSVDFSVS---GRLLFAGYND---------  243 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~---~~~~~~--~~~~~~~~~~~~s~~---~~~l~~g~~d---------  243 (320)
                      -.+|+|.|+|+.+++ -..|.|++++. .+..   +.....  .....+...++++|+   ..+|.+.+..         
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~~-~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVDK-DGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEET-TTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEeC-CCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            468999999987665 56999999993 3332   111110  011124577899984   3344444331         


Q ss_pred             CeEEEEcCCCC-------eEE-EEeec---CCCceeEEEECcCCCeEEEecCCCc
Q psy14961        244 YTINVWDSLKC-------CRV-NHLMG---HENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       244 g~v~~wd~~~~-------~~~-~~~~~---h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                      ..|.-|.....       +.+ ..+..   .......|+|.|||.+.++.+..+.
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~  136 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN  136 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC
Confidence            12333322211       111 11122   2334677999999988877775443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=91.76  E-value=6.3  Score=36.69  Aligned_cols=119  Identities=10%  Similarity=0.056  Sum_probs=71.9

Q ss_pred             CeEEEEEcCCC----CEEEEeeCCCeEEEEECCCC-----eeEeEEe---cCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        180 DVNSVKFHPSG----DAVATGSDDATCRLFDLRAD-----KEVACYK---KDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       180 ~v~~v~~~p~g----~~l~s~s~dg~i~iwd~~~~-----~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                      -|..++|.|-+    ..|++....+.|.+|.+...     +.+....   .+....-...+.|+|....|++=+....-.
T Consensus        58 hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV  137 (671)
T PF15390_consen   58 HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSV  137 (671)
T ss_pred             eeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeE
Confidence            47889999853    35667777889999987522     1111111   111111123577999999887766554434


Q ss_pred             EEcCCC-CeEEEEeecCCCceeEEEECcCCCeEEEecCC-CceEeeecchHhh
Q psy14961        248 VWDSLK-CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD-TTLRDEESKNRYV  298 (320)
Q Consensus       248 ~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D-~~ir~~~~~~~~~  298 (320)
                      +++... ..++..=..-.+-|.|.+|.+||+.|+.|-.. --..+||..+...
T Consensus       138 ~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qKtL  190 (671)
T PF15390_consen  138 LPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQKTL  190 (671)
T ss_pred             eeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchhhh
Confidence            454332 22333223456789999999999987776432 2356899655533

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=91.59  E-value=0.9  Score=26.20  Aligned_cols=29  Identities=17%  Similarity=0.142  Sum_probs=24.4

Q ss_pred             eEEEEEecCCc---EEEEEeCCCeEEEEcCCC
Q psy14961        225 ATSVDFSVSGR---LLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       225 ~~~~~~s~~~~---~l~~g~~dg~v~~wd~~~  253 (320)
                      +..++|||...   +|+..-..|.|.++|+.+
T Consensus         3 vR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    3 VRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             eEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            46789998655   888888899999999875

It contains a characteristic DLL sequence motif.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.32  E-value=6.8  Score=33.19  Aligned_cols=118  Identities=8%  Similarity=0.107  Sum_probs=77.4

Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      +-...+.++.|+|+.+.|.+......-.++=-..|+.+..++... ......+.+.-+|++.++--.++.+.++......
T Consensus        83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t  161 (316)
T COG3204          83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVDADT  161 (316)
T ss_pred             cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccc-cCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence            444568999999999999888776666666555666666655433 1234556777777777776677777776433221


Q ss_pred             EE-------EEe--ecC-CCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        256 RV-------NHL--MGH-ENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       256 ~~-------~~~--~~h-~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+       .++  ..+ ...-..+||.|..+.|..+-.-.=++++..+
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            11       111  123 4567899999988888888766667766653

>KOG1916|consensus

Probab=91.29  E-value=0.53  Score=45.45  Aligned_cols=96  Identities=16%  Similarity=0.193  Sum_probs=53.4

Q ss_pred             CCeEEEEEecccCCccccccccc-----ccccCeEEEE---ecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcccee
Q psy14961         40 DNKVTVYAIALEDDSSAKKKTVA-----THTSFISCCI---FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM  111 (320)
Q Consensus        40 dg~i~v~~~~~~~~~~~~~~~~~-----~h~~~v~~~~---~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~  111 (320)
                      -|.+.||+++.-+.  .....+.     .....+..+.   |-.+.-++..+-.++++++...++.. ...+..|...+.
T Consensus       152 vg~lfVy~vd~l~G--~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~  228 (1283)
T KOG1916|consen  152 VGELFVYDVDVLQG--EIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRAL-RSLFRSHSQRVT  228 (1283)
T ss_pred             hhhhheeehHhhcc--ccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHH-HHHHHhcCCCcc
Confidence            37889999864211  1111111     1122223333   33344566667778899987765432 233455665554


Q ss_pred             EEEE---------eeCCCCCEEEEEeCCCeEEEEeC
Q psy14961        112 DLDL---------APSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus       112 ~~~~---------~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      .+++         ..++||..|+.++.||.++.|.+
T Consensus       229 d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi  264 (1283)
T KOG1916|consen  229 DMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI  264 (1283)
T ss_pred             cHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence            4332         23567888888888888877764

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=91.15  E-value=16  Score=35.88  Aligned_cols=138  Identities=20%  Similarity=0.290  Sum_probs=82.0

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCcccee-------------EEEEeeCCCCCEEEEEeC----------CCeE
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM-------------DLDLAPSETGNTFVSGSS----------DKLV  133 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~-------------~~~~~~~~~~~~l~s~~~----------dg~i  133 (320)
                      +..++.++.|+.+.-.|.++++.+..+.. .+.+.             ...-.|.-.+..++.|+.          +|.|
T Consensus       260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I  338 (764)
T TIGR03074       260 ARRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI  338 (764)
T ss_pred             CCEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence            45788899999999999999998876532 22110             011111112346777643          6889


Q ss_pred             EEEeCCCCcEEEEeccCC---c---------------------------cc-------c--------------CCCeEEE
Q psy14961        134 NIWDMRTGYCVQSFEGHH---N---------------------------LI-------T--------------DDKLVNI  162 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~---~---------------------------~~-------~--------------~d~~i~i  162 (320)
                      +-+|.++|+.+-.+..-.   .                           .+       .              ..+.|.-
T Consensus       339 ~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvA  418 (764)
T TIGR03074       339 RAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVA  418 (764)
T ss_pred             EEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEE
Confidence            999999998776543100   0                           00       0              0123455


Q ss_pred             EECcCCeeeeeecCCCCC---------eEEEEEcC-CCC---EEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        163 WDMRTGYCVQSFEGHQSD---------VNSVKFHP-SGD---AVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       163 wd~~~~~~~~~~~~~~~~---------v~~v~~~p-~g~---~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      .|.++++..-.++....+         ..=+.+.- +|+   .++.++++|.+.+.|-++++.+..
T Consensus       419 LD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~  484 (764)
T TIGR03074       419 LDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP  484 (764)
T ss_pred             EeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence            577777665544331111         11122322 553   688999999999999998887644

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG4499|consensus

Probab=90.76  E-value=8.1  Score=31.67  Aligned_cols=93  Identities=11%  Similarity=0.098  Sum_probs=61.8

Q ss_pred             EEEEEcCCCCEE-EEeeCCCeEEEEE--CCCCee-----EeEEecCc--ceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        182 NSVKFHPSGDAV-ATGSDDATCRLFD--LRADKE-----VACYKKDS--ILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       182 ~~v~~~p~g~~l-~s~s~dg~i~iwd--~~~~~~-----~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      +.++|+.+.+.+ +.-+.+-+|.-||  ..++..     +...++..  ...-.-.+.+.-+|.+.++..+.++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            467787766655 4555666776677  333321     11111100  0011123445668899999999999999999


Q ss_pred             CCCeEEEEeecCCCceeEEEECc
Q psy14961        252 LKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       252 ~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      .+++.+.++.-....|++++|--
T Consensus       241 ~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEecC
Confidence            99999988887799999999974

>PHA03098 kelch-like protein; Provisional

Probab=90.71  E-value=15  Score=34.55  Aligned_cols=22  Identities=18%  Similarity=0.374  Sum_probs=14.7

Q ss_pred             CCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961        233 SGRLLFAGYND-----YTINVWDSLKC  254 (320)
Q Consensus       233 ~~~~l~~g~~d-----g~v~~wd~~~~  254 (320)
                      ++.+++.|+.+     ..+..||..+.
T Consensus       487 ~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        487 NNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence            67777777643     46777876554

>KOG2247|consensus

Probab=90.12  E-value=0.03  Score=49.86  Aligned_cols=106  Identities=15%  Similarity=0.193  Sum_probs=71.9

Q ss_pred             eEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEE
Q psy14961        181 VNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH  259 (320)
Q Consensus       181 v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~  259 (320)
                      ...++|.-+++.+ +.+-..+.+.+||+.+..... .+.... ..-.-+.|++.+..++.|...|.+.+++....+..-.
T Consensus        77 aldm~wDkegdvlavlAek~~piylwd~n~eytqq-LE~gg~-~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv  154 (615)
T KOG2247|consen   77 ALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-LESGGT-SSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIV  154 (615)
T ss_pred             HhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-HhccCc-chHHHHhhccCCccccccccccceEEEeccchhhhhh
Confidence            3457777777765 455668899999997643211 111000 0011256888888999998999999999877666554


Q ss_pred             eecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        260 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       260 ~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      .-.|.-.+.++++.+.+. .+.++.|.++-
T Consensus       155 ~Gkh~RRgtq~av~lEd~-vil~dcd~~L~  183 (615)
T KOG2247|consen  155 MGKHQRRGTQIAVTLEDY-VILCDCDNTLS  183 (615)
T ss_pred             hcccccceeEEEecccce-eeecCcHHHHH
Confidence            444889999999999764 56677766554

>KOG4460|consensus

Probab=89.59  E-value=5.3  Score=36.59  Aligned_cols=75  Identities=11%  Similarity=-0.073  Sum_probs=50.5

Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEc-----C----CCCeEE---EE------e--ecCCCceeEEEECcCC---Ce
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWD-----S----LKCCRV---NH------L--MGHENRVSCLQVSPDG---TA  278 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd-----~----~~~~~~---~~------~--~~h~~~i~~i~~s~~~---~~  278 (320)
                      .+.+..+..++.|+.++..+.+|.+.++=     .    ..+++.   ++      +  ....-.+..++|+|++   ..
T Consensus       103 ~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~h  182 (741)
T KOG4460|consen  103 LFEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPH  182 (741)
T ss_pred             eEEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCce
Confidence            34567788899999999999999776642     1    112111   11      1  1112357888999985   56


Q ss_pred             EEEecCCCceEeeecchH
Q psy14961        279 FSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       279 l~s~s~D~~ir~~~~~~~  296 (320)
                      |..-+.|.+||+++.-+.
T Consensus       183 L~iL~sdnviRiy~lS~~  200 (741)
T KOG4460|consen  183 LVLLTSDNVIRIYSLSEP  200 (741)
T ss_pred             EEEEecCcEEEEEecCCc
Confidence            888889999999995443

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=89.22  E-value=3.6  Score=33.63  Aligned_cols=67  Identities=12%  Similarity=0.052  Sum_probs=45.8

Q ss_pred             EcCCCCEEEEeeCCCeEEEEECCCCeeEeEE-e-----cC------cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961        186 FHPSGDAVATGSDDATCRLFDLRADKEVACY-K-----KD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       186 ~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~-~-----~~------~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      +..++++|++...+|.+++||+...+.+... .     ..      .....+..+.++.+|.-+++-+ +|....|+..-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            4556889999999999999999887653221 0     00      1223456778888888776655 57788887543

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=89.13  E-value=16  Score=32.53  Aligned_cols=103  Identities=15%  Similarity=0.042  Sum_probs=52.4

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-----eeEeEEe---cCc--ceeeeEEEEEecCCcEEEEEeCC------
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRAD-----KEVACYK---KDS--ILFGATSVDFSVSGRLLFAGYND------  243 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-----~~~~~~~---~~~--~~~~~~~~~~s~~~~~l~~g~~d------  243 (320)
                      ....+++.++| .++ ++...-.++.|....     +......   ...  .......+.|.|||.+.++-+..      
T Consensus        73 ~p~Gi~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~  150 (367)
T TIGR02604        73 MVTGLAVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVT  150 (367)
T ss_pred             CccceeEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceec
Confidence            34678899888 444 444443344454321     1111111   110  11224578899999865543311      


Q ss_pred             -------------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        244 -------------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       244 -------------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                                   |.|.-++.........-.++. ....++|+|+|+++++-..+
T Consensus       151 ~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~r-np~Gl~~d~~G~l~~tdn~~  204 (367)
T TIGR02604       151 RPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQ-NPYGHSVDSWGDVFFCDNDD  204 (367)
T ss_pred             cCCCccCcccccCceEEEEecCCCeEEEEecCcC-CCccceECCCCCEEEEccCC
Confidence                         334444443322221112332 34689999999998775433

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=89.13  E-value=10  Score=33.05  Aligned_cols=104  Identities=15%  Similarity=0.226  Sum_probs=63.9

Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCe------EEEEECCCC----eeEeEE------ecCcce-----eeeEEEEEecCCcEE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDAT------CRLFDLRAD----KEVACY------KKDSIL-----FGATSVDFSVSGRLL  237 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~------i~iwd~~~~----~~~~~~------~~~~~~-----~~~~~~~~s~~~~~l  237 (320)
                      ..+..+.+.|++..+++.+.+|.      +...++...    ..+...      ......     ....++++.++|.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            35678899977777888888887      665555431    111100      011111     145577887788877


Q ss_pred             EEEeCC------CeEEEEcCCCCeEEEEe---------------ecCCCceeEEEECcCCCeEEEec
Q psy14961        238 FAGYND------YTINVWDSLKCCRVNHL---------------MGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       238 ~~g~~d------g~v~~wd~~~~~~~~~~---------------~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ++.-.+      ..|.-++.. +.....+               ........+|+++|||+.|.++-
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~  165 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM  165 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence            776556      678888865 3332222               12345789999999999666664

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=88.72  E-value=4.7  Score=32.93  Aligned_cols=65  Identities=14%  Similarity=0.107  Sum_probs=48.5

Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe------e--------cCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL------M--------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~------~--------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+.+..++.+|.+-+.+|.+.+||+.+.+.+...      .        .....|..+.++.+|.-+++-+. +....|+
T Consensus        15 ~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsn-g~~y~y~   93 (219)
T PF07569_consen   15 VSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSN-GDSYSYS   93 (219)
T ss_pred             eEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeC-CCEEEec
Confidence            3456778999999999999999998876543221      1        24567899999999998887763 5555555

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=88.53  E-value=13  Score=30.86  Aligned_cols=142  Identities=16%  Similarity=0.299  Sum_probs=70.2

Q ss_pred             EeecccceeEEEEEeC-ccceEEEEEcCCCCEEEEecC-C--CeEEEEEecc-cCC-cccccccccccccCeEEEEecCC
Q psy14961          3 IWDGLTQTKEHSVTMP-ATWVMACAYAPSGSVVASGGL-D--NKVTVYAIAL-EDD-SSAKKKTVATHTSFISCCIFPNS   76 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~-~~~V~~~~~~~~~~~l~s~~~-d--g~i~v~~~~~-~~~-~~~~~~~~~~h~~~v~~~~~~~~   76 (320)
                      +||..+.+... +... ..+=.+-+|.+||++|.+||. +  ..+++++... ... ..............-....-.++
T Consensus        50 ~yD~~tn~~rp-l~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~D  128 (243)
T PF07250_consen   50 EYDPNTNTFRP-LTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPD  128 (243)
T ss_pred             EEecCCCcEEe-ccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCC
Confidence            68888777643 3322 223333458899999999875 2  3477776532 000 00000000111122223334578


Q ss_pred             CCEEEEEeCCC-eEEEEECCCc--ceee-ecccC-----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961         77 DQQILTGSGDC-TCALWDVESS--QLLQ-SFHGH-----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        77 ~~~l~s~~~dg-~v~iwd~~~~--~~~~-~~~~~-----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~  147 (320)
                      |+.|+.|+.+. +...|.....  .... .+...     ...-+- -++..|+|+.|+.+..+.  .+||..++..++.+
T Consensus       129 G~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP-~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~l  205 (243)
T PF07250_consen  129 GRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYP-FVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTL  205 (243)
T ss_pred             CCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCc-eEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeC
Confidence            88888888764 4455543211  1111 01100     001111 123356788888887654  45687776555554


Q ss_pred             c
Q psy14961        148 E  148 (320)
Q Consensus       148 ~  148 (320)
                      .
T Consensus       206 P  206 (243)
T PF07250_consen  206 P  206 (243)
T ss_pred             C
Confidence            3

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=88.00  E-value=9  Score=28.40  Aligned_cols=108  Identities=6%  Similarity=0.059  Sum_probs=60.9

Q ss_pred             EEEcCCCCEEEEeeCCCeEEEEECCCCee--------EeEEecCcceeeeEEEEEec--CCcEEEEEeCCCeEEEEcCCC
Q psy14961        184 VKFHPSGDAVATGSDDATCRLFDLRADKE--------VACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       184 v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      -.|......|++++.-|+|.|++......        +........+..+.+-.|.|  ....|+.|+.. .+..||..+
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t-~llaYDV~~   82 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQT-SLLAYDVEN   82 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccc-eEEEEEccc
Confidence            34555556788888888999998764321        22222222222233344543  23467777754 688999876


Q ss_pred             CeEEEEeecCCCceeEEEECc---CCCeEEEecCCCceEeeec
Q psy14961        254 CCRVNHLMGHENRVSCLQVSP---DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       254 ~~~~~~~~~h~~~i~~i~~s~---~~~~l~s~s~D~~ir~~~~  293 (320)
                      ..-+.. ..-.+.|++|.+-.   ....|+..|-+..|+-+|.
T Consensus        83 N~d~Fy-ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~  124 (136)
T PF14781_consen   83 NSDLFY-KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDY  124 (136)
T ss_pred             Cchhhh-hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCC
Confidence            655543 23346777777642   2233555555566665554

>KOG4499|consensus

Probab=87.80  E-value=11  Score=30.95  Aligned_cols=92  Identities=10%  Similarity=0.066  Sum_probs=56.2

Q ss_pred             EEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccc------ccc--ccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         24 ACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKK------TVA--THTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        24 ~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~------~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      +++|+.+.+.+ ..-+-+-+|.-||.+.+........      ...  ++..+ ..+....+|...++.-+.++|...|+
T Consensus       162 gl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~P-DGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  162 GLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEP-DGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             cccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCC-CcceEccCCcEEEEEecCcEEEEECC
Confidence            57787766644 4455667787788543211100000      000  11111 11222446777777777889999999


Q ss_pred             CCcceeeecccCccceeEEEEe
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLA  116 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~  116 (320)
                      .+++.+..++-....+.+++|.
T Consensus       241 ~tGK~L~eiklPt~qitsccFg  262 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFG  262 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEec
Confidence            9999999888888888888875

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=87.27  E-value=16  Score=30.53  Aligned_cols=108  Identities=12%  Similarity=0.015  Sum_probs=62.0

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEE-CCCCeeEe-EEecCcceeeeEEEEEecCCcEEEEEe---CCCeEEEEcCC--
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFD-LRADKEVA-CYKKDSILFGATSVDFSVSGRLLFAGY---NDYTINVWDSL--  252 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd-~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~---~dg~v~~wd~~--  252 (320)
                      .+..-+|++++...+....+...+++. ...++... ........-.+.++.+||||..+|.-.   .++.|.+=-+.  
T Consensus        67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~  146 (253)
T PF10647_consen   67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRD  146 (253)
T ss_pred             ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeC
Confidence            456678899987766666566666663 22222211 111110000478999999999887765   34566654211  


Q ss_pred             -CC--eEE----EEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961        253 -KC--CRV----NHLMGHENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       253 -~~--~~~----~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                       .+  ..+    .........+..++|.+++.+++.+...+.
T Consensus       147 ~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~  188 (253)
T PF10647_consen  147 GDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGG  188 (253)
T ss_pred             CCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCC
Confidence             12  111    111123457899999999998777665443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=87.08  E-value=18  Score=30.91  Aligned_cols=185  Identities=15%  Similarity=0.207  Sum_probs=92.5

Q ss_pred             eEEEEECCCcceeeeccc------CccceeEEEEeeCCCC---CEEE-EEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         88 TCALWDVESSQLLQSFHG------HTGELMDLDLAPSETG---NTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~---~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      .+-+||+.+++.++.+.-      ..+....+.+...+..   .+++ +=+..+-|.++|+.+++.-+....+...-...
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~  114 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA  114 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred             EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence            344566666665544321      2334455555443221   2333 33444689999999998777665533222111


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcC---CCCEEEEeeCCCeEEEEECCC-----Cee---------EeEEecCc
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP---SGDAVATGSDDATCRLFDLRA-----DKE---------VACYKKDS  220 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p---~g~~l~s~s~dg~i~iwd~~~-----~~~---------~~~~~~~~  220 (320)
                      ..+.+    .+... ..   ...+..++.+|   +|+.|+-....+. ++|-+.+     ...         +...-...
T Consensus       115 ~~~~i----~g~~~-~~---~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~  185 (287)
T PF03022_consen  115 GPFTI----GGESF-QW---PDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPTSVLRDPSLSDAQALASQVQDLGDKG  185 (287)
T ss_dssp             EEEEE----TTEEE-EE---TTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEHHHHCSTT--HHH-HHHT-EEEEE--
T ss_pred             cceec----cCceE-ec---CCCccccccCCCCCCccEEEEEeCCCC-cEEEEEHHHhhCccccccccccccceeccccC
Confidence            21111    12222 11   22378888877   6667765554332 2332211     110         00000000


Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe-----EEEEeecC-CCceeEEEECc--CCCeEEEec
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-----RVNHLMGH-ENRVSCLQVSP--DGTAFSSGS  283 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~-----~~~~~~~h-~~~i~~i~~s~--~~~~l~s~s  283 (320)
                        .....++++++|.+.++--+.+.|..|+.....     .+-..... -..+.++++.+  +|.+-+.+.
T Consensus       186 --~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn  254 (287)
T PF03022_consen  186 --SQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN  254 (287)
T ss_dssp             ---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred             --CCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEEC
Confidence              123457788999988888899999999977521     11111222 34789999999  887766653

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=87.06  E-value=16  Score=30.31  Aligned_cols=134  Identities=19%  Similarity=0.239  Sum_probs=69.5

Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-C--CeEEEEECCC-CeeEeEEecCccee---eeEEEEEecC
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-D--ATCRLFDLRA-DKEVACYKKDSILF---GATSVDFSVS  233 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-d--g~i~iwd~~~-~~~~~~~~~~~~~~---~~~~~~~s~~  233 (320)
                      .+||+.+++...--.....-..+=++-|+|+.+.+|+. +  ..+++++... ...-...+......   .=.++..-||
T Consensus        49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~D  128 (243)
T PF07250_consen   49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPD  128 (243)
T ss_pred             EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCC
Confidence            46777765432211111112233456789999988874 3  3578887543 11101111111000   0113445679


Q ss_pred             CcEEEEEeCCC-eEEEEcCCC--CeEEE-EeecC------CCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        234 GRLLFAGYNDY-TINVWDSLK--CCRVN-HLMGH------ENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       234 ~~~l~~g~~dg-~v~~wd~~~--~~~~~-~~~~h------~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      |+.|+.|+... +..+|....  ..... .+...      ..-=--+...|||++|+.+..+..|..+...
T Consensus       129 G~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n  199 (243)
T PF07250_consen  129 GRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTN  199 (243)
T ss_pred             CCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEEeCCCC
Confidence            99999888653 456665421  11111 11111      1122356778999999999988777766653

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PHA03098 kelch-like protein; Provisional

Probab=86.95  E-value=27  Score=32.77  Aligned_cols=93  Identities=12%  Similarity=0.070  Sum_probs=43.5

Q ss_pred             CCCEEEEeeCC------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC--------CeEEEEcCCCC
Q psy14961        189 SGDAVATGSDD------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND--------YTINVWDSLKC  254 (320)
Q Consensus       189 ~g~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d--------g~v~~wd~~~~  254 (320)
                      ++..++.|+.+      ..+..||+.+.+=...-+....... .+ +...++.+.+.|+.+        ..+..||..+.
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~  466 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYG-GC-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN  466 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccC-ce-EEEECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence            45566666632      3577888765431111010101111 11 223466777777642        23778886654


Q ss_pred             eE--EEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        255 CR--VNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       255 ~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      +-  +..+.........+.  .++++++.||.+
T Consensus       467 ~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~  497 (534)
T PHA03098        467 KWTELSSLNFPRINASLCI--FNNKIYVVGGDK  497 (534)
T ss_pred             ceeeCCCCCcccccceEEE--ECCEEEEEcCCc
Confidence            32  221111111111222  378888888865

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=86.26  E-value=4.3  Score=38.25  Aligned_cols=28  Identities=32%  Similarity=0.510  Sum_probs=24.1

Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~  103 (320)
                      +..++++-+.|+++|+||+.+++++...
T Consensus       229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  229 DDTFLFTLSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             TTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            5678999999999999999999886543

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PRK10115 protease 2; Provisional

Probab=85.30  E-value=28  Score=33.97  Aligned_cols=109  Identities=6%  Similarity=-0.041  Sum_probs=60.9

Q ss_pred             CeEEEEEcCCCCEEEEee-CC----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC------CeEEE
Q psy14961        180 DVNSVKFHPSGDAVATGS-DD----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND------YTINV  248 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s-~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d------g~v~~  248 (320)
                      .+..+.++|+|++|+-+. .+    -.|++.|+.+++.+......   .. ..+.|++|++.|+....+      ..|..
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~---~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~  203 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN---VE-PSFVWANDSWTFYYVRKHPVTLLPYQVWR  203 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC---cc-eEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence            466788999999876542 22    35888898877532111111   11 358899999877665432      35666


Q ss_pred             EcCCCCe--EEEEeecCCCcee-EEEECcCCCeEEEecC---CCceEeee
Q psy14961        249 WDSLKCC--RVNHLMGHENRVS-CLQVSPDGTAFSSGSW---DTTLRDEE  292 (320)
Q Consensus       249 wd~~~~~--~~~~~~~h~~~i~-~i~~s~~~~~l~s~s~---D~~ir~~~  292 (320)
                      +++.+..  ...-+........ .+..+.|+++++..+.   ++.+.+++
T Consensus       204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~  253 (686)
T PRK10115        204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLD  253 (686)
T ss_pred             EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEE
Confidence            7776652  1111222222232 3444558887655543   34466666

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=85.06  E-value=4.9  Score=22.48  Aligned_cols=40  Identities=15%  Similarity=0.094  Sum_probs=26.1

Q ss_pred             cCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEE
Q psy14961        232 VSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       232 ~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~  272 (320)
                      |+++.|+++. .+++|.++|..+...+..+..- ..-..++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence            5677666655 5789999998887777665542 22334444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=84.45  E-value=29  Score=30.84  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=23.1

Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                      +.+.-++...+.......++. ....++|+|+|+.+++-..+
T Consensus       164 g~i~r~~pdg~~~e~~a~G~r-np~Gl~~d~~G~l~~tdn~~  204 (367)
T TIGR02604       164 GGLFRYNPDGGKLRVVAHGFQ-NPYGHSVDSWGDVFFCDNDD  204 (367)
T ss_pred             ceEEEEecCCCeEEEEecCcC-CCccceECCCCCEEEEccCC
Confidence            445555555443322223333 34579999999887765433

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=84.32  E-value=9.1  Score=36.10  Aligned_cols=29  Identities=24%  Similarity=0.613  Sum_probs=25.3

Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961        120 TGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus       120 ~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      +..++++.+.|+.+|+||+.+++++.+..
T Consensus       229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  229 DDTFLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             TTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            45789999999999999999999977654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=83.96  E-value=35  Score=31.35  Aligned_cols=104  Identities=13%  Similarity=0.107  Sum_probs=57.3

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE--Eec---CcceeeeEEEEEecCC------cEEEEEe-------
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC--YKK---DSILFGATSVDFSVSG------RLLFAGY-------  241 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~--~~~---~~~~~~~~~~~~s~~~------~~l~~g~-------  241 (320)
                      .-..|+|.|+|+.|++--..|.|++++...+.....  .+.   .....+...++|+|+-      .+|+..+       
T Consensus        31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~  110 (454)
T TIGR03606        31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDK  110 (454)
T ss_pred             CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCC
Confidence            346899999998776654469999998654432111  110   0012345678999874      3455543       


Q ss_pred             ---CCCeEEEEcCCC-------CeEEE-Ee---ecCCCceeEEEECcCCCeEEEecCC
Q psy14961        242 ---NDYTINVWDSLK-------CCRVN-HL---MGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       242 ---~dg~v~~wd~~~-------~~~~~-~~---~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                         ....|.-|....       .+.+. .+   ..|.  -..|+|.|||+++++-+..
T Consensus       111 ~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       111 ELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             CccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence               122333343221       11111 11   1243  3578899999987766654

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PHA02790 Kelch-like protein; Provisional

Probab=83.36  E-value=38  Score=31.39  Aligned_cols=67  Identities=13%  Similarity=0.127  Sum_probs=33.1

Q ss_pred             CCCCEEEEecCCC--eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC---CeEEEEECCCcce
Q psy14961         29 PSGSVVASGGLDN--KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD---CTCALWDVESSQL   99 (320)
Q Consensus        29 ~~~~~l~s~~~dg--~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~   99 (320)
                      -++.+.+.||.++  .+..|+..  .+.+.....+.........+..  ++...+.||.+   ..+..||+.+.+-
T Consensus       317 ~~~~iYviGG~~~~~sve~ydp~--~n~W~~~~~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~W  388 (480)
T PHA02790        317 ANNKLYVVGGLPNPTSVERWFHG--DAAWVNMPSLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHDQW  388 (480)
T ss_pred             ECCEEEEECCcCCCCceEEEECC--CCeEEECCCCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCCEE
Confidence            4666667777543  46666642  2223222223211111122222  45566667654   3577888876543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=82.76  E-value=30  Score=29.81  Aligned_cols=111  Identities=12%  Similarity=0.079  Sum_probs=56.2

Q ss_pred             CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC-CeeEeE--EecCcceeeeEEEEEecCCcEEEEEeCCCeEEE-EcC-C
Q psy14961        178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRA-DKEVAC--YKKDSILFGATSVDFSVSGRLLFAGYNDYTINV-WDS-L  252 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~-wd~-~  252 (320)
                      ...|.+|.|.|++...+.+ +.|.|++-+... .+....  .+......++..+++.+++...|+|+.. .+.. -|- .
T Consensus       186 ~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G-~l~~S~DgGk  263 (302)
T PF14870_consen  186 SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG-TLLVSTDGGK  263 (302)
T ss_dssp             SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT--EEEESSTTS
T ss_pred             cceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc-cEEEeCCCCc
Confidence            4578999999998765544 889999988322 222111  1111223456788999998888877654 3322 121 1


Q ss_pred             CCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961        253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      +.++......-......|.|.++.+-||. +.||.+--|
T Consensus       264 tW~~~~~~~~~~~n~~~i~f~~~~~gf~l-G~~G~ll~~  301 (302)
T PF14870_consen  264 TWQKDRVGENVPSNLYRIVFVNPDKGFVL-GQDGVLLRY  301 (302)
T ss_dssp             S-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             cceECccccCCCCceEEEEEcCCCceEEE-CCCcEEEEe
Confidence            12222222233456789999876665664 466766544

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=82.58  E-value=7.9  Score=34.92  Aligned_cols=164  Identities=15%  Similarity=0.148  Sum_probs=84.1

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cc-cccCeE-EEEecCCCCEEEEEeCCCeEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-AT-HTSFIS-CCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~-h~~~v~-~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..+...|..+-..|||+.+..-+. ..+.+++++.......+.... .+ ....|+ ++.....+..++.+..||-|.-|
T Consensus       217 ~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQW  295 (733)
T COG4590         217 SVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQW  295 (733)
T ss_pred             CCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeee
Confidence            344566778889999996655443 678899886443322211111 11 001122 12223445678899999999988


Q ss_pred             -ECCC-cce----eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECc
Q psy14961         93 -DVES-SQL----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR  166 (320)
Q Consensus        93 -d~~~-~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~  166 (320)
                       |+.. +++    ++.++-...++..  +.|..+-+-+++-+.+|.+.++--...+                        
T Consensus       296 Fdvr~~~~p~l~h~R~f~l~pa~~~~--l~pe~~rkgF~~l~~~G~L~~f~st~~~------------------------  349 (733)
T COG4590         296 FDVRRDGQPHLNHIRNFKLAPAEVQF--LLPETNRKGFYSLYRNGTLQSFYSTSEK------------------------  349 (733)
T ss_pred             eeeecCCCCcceeeeccccCccccee--eccccccceEEEEcCCCceeeeecccCc------------------------
Confidence             4432 221    2222211222221  2233333445555555555444321111                        


Q ss_pred             CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe
Q psy14961        167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK  211 (320)
Q Consensus       167 ~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~  211 (320)
                         .+. ++.--..+.-+++||.++++++-. .|.++++.+.+..
T Consensus       350 ---~lL-~~~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr~  389 (733)
T COG4590         350 ---LLL-FERAYQAPQLVAMSPNQAYLLSED-QGKIRLAQLENRN  389 (733)
T ss_pred             ---cee-hhhhhcCcceeeeCcccchheeec-CCceEEEEecCCC
Confidence               000 001112345689999999887654 4678998876543

>KOG1900|consensus

Probab=82.51  E-value=17  Score=37.20  Aligned_cols=32  Identities=25%  Similarity=0.469  Sum_probs=24.2

Q ss_pred             CCCeEEEEECCCcceeeecccCccceeEEEEe
Q psy14961         85 GDCTCALWDVESSQLLQSFHGHTGELMDLDLA  116 (320)
Q Consensus        85 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  116 (320)
                      .|..+.+|+.+++.....+.+....|..+.+.
T Consensus        97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~Lv  128 (1311)
T KOG1900|consen   97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLV  128 (1311)
T ss_pred             eCCeEEEEEcCCCCccccccchhhhheeeeee
Confidence            47899999999977777777766677666543

>KOG1983|consensus

Probab=82.41  E-value=50  Score=33.76  Aligned_cols=28  Identities=21%  Similarity=0.360  Sum_probs=24.2

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEe
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAI   48 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~   48 (320)
                      .-..++|+|.-.++|-+...|.+++|-.
T Consensus        37 ~~~~~afD~~q~llai~t~tg~i~~yg~   64 (993)
T KOG1983|consen   37 TPSALAFDPTQGLLAIGTRTGAIKIYGQ   64 (993)
T ss_pred             CCcceeeccccceEEEEEecccEEEecc
Confidence            3467899999999999999999999943

>KOG1897|consensus

Probab=81.59  E-value=61  Score=32.49  Aligned_cols=131  Identities=12%  Similarity=0.156  Sum_probs=75.1

Q ss_pred             eEEEEECcCCeeeeeecCCC----CCeEEEEEcCC-CCEEEEee----------CCCeEEEEECCCCeeEeEEecCccee
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQ----SDVNSVKFHPS-GDAVATGS----------DDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~----~~v~~v~~~p~-g~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                      .++++|-.+.+.+...+-..    -.|.+..|..| +.+++.|.          ..|.|.++.....+.+..........
T Consensus       751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~G  830 (1096)
T KOG1897|consen  751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKG  830 (1096)
T ss_pred             EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeecc
Confidence            35666665544332221111    14566678877 55666663          23566666655422222211111111


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+.++ .--+|+++|.-  ...|++|+....+.++.-..|..++..|...-.|..++.|.-=+.+-+..
T Consensus       831 av~aL-~~fngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~  896 (1096)
T KOG1897|consen  831 AVYAL-VEFNGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQ  896 (1096)
T ss_pred             ceeeh-hhhCCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence            11111 11356666543  45799999887766666667888999999999999999998766666544

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=81.50  E-value=7  Score=21.60  Aligned_cols=28  Identities=18%  Similarity=0.350  Sum_probs=18.4

Q ss_pred             CCCeEEEEEcCCCCEEEEee-CC--CeEEEE
Q psy14961        178 QSDVNSVKFHPSGDAVATGS-DD--ATCRLF  205 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s-~d--g~i~iw  205 (320)
                      ...-....|+|||++|+-++ .+  |...||
T Consensus         8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            34567899999999886544 45  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=81.48  E-value=27  Score=28.30  Aligned_cols=98  Identities=13%  Similarity=0.192  Sum_probs=56.4

Q ss_pred             CEEEEeeCCCeEEEEECCCC--eeEeEEecCcceeeeEEEEEecCCcEEEEEeCC---C---eEEEE---cCC--CCeEE
Q psy14961        191 DAVATGSDDATCRLFDLRAD--KEVACYKKDSILFGATSVDFSVSGRLLFAGYND---Y---TINVW---DSL--KCCRV  257 (320)
Q Consensus       191 ~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g---~v~~w---d~~--~~~~~  257 (320)
                      +.|..+...+.|.+|++...  +.+..+..-   ..+..+.++..|.||+|=-++   .   .+++|   +..  ...++
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv---~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v  105 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV---GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPV  105 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch---hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcE
Confidence            45544466778999999833  233333322   235688899999999995422   2   56664   322  11111


Q ss_pred             E-Eee---------------------cCCCceeEEEECc-CCCeEEEecCCCceEeeec
Q psy14961        258 N-HLM---------------------GHENRVSCLQVSP-DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       258 ~-~~~---------------------~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~  293 (320)
                      . .+.                     +-..++.+|+.-| .|++|+. + ++++.+|..
T Consensus       106 ~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg-~-~~~l~lf~l  162 (215)
T PF14761_consen  106 RVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVG-C-GNKLVLFTL  162 (215)
T ss_pred             EEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEE-c-CCEEEEEEE
Confidence            1 111                     2244678888888 5776554 3 356667664

>PHA02790 Kelch-like protein; Provisional

Probab=81.01  E-value=47  Score=30.81  Aligned_cols=90  Identities=11%  Similarity=0.080  Sum_probs=43.5

Q ss_pred             CCCEEEEeeCCC---eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE--EEEeecC
Q psy14961        189 SGDAVATGSDDA---TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR--VNHLMGH  263 (320)
Q Consensus       189 ~g~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~--~~~~~~h  263 (320)
                      +|+..+.|+.++   .+..||..+++=...-+.......  ..+...++++.+.|+   .+..||..+.+-  +..+...
T Consensus       362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~--~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~  436 (480)
T PHA02790        362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK--SCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYP  436 (480)
T ss_pred             CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc--ceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCC
Confidence            466667777543   466788765421110000001111  112234677777774   467788654332  2222111


Q ss_pred             CCceeEEEECcCCCeEEEecCC
Q psy14961        264 ENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       264 ~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      ..... + ..-+|+..+.||.+
T Consensus       437 r~~~~-~-~v~~~~IYviGG~~  456 (480)
T PHA02790        437 RDNPE-L-IIVDNKLLLIGGFY  456 (480)
T ss_pred             ccccE-E-EEECCEEEEECCcC
Confidence            11222 2 23478899999876

>smart00564 PQQ beta-propeller repeat

Probab=80.95  E-value=4.5  Score=21.28  Aligned_cols=26  Identities=27%  Similarity=0.377  Sum_probs=21.0

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeee
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~  102 (320)
                      +..++.++.+|.+..+|..+++.+..
T Consensus         6 ~~~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        6 DGTVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             CCEEEEEcCCCEEEEEEcccCcEEEE
Confidence            34688888899999999988887654

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=80.59  E-value=50  Score=30.82  Aligned_cols=107  Identities=14%  Similarity=0.154  Sum_probs=53.6

Q ss_pred             cCCCCEEEEecCCCeEEEEEecccCCccccccccccc-ccCeEEEEecCCC-CEEEEEeCCCe--EEEEECCCcceeeec
Q psy14961         28 APSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH-TSFISCCIFPNSD-QQILTGSGDCT--CALWDVESSQLLQSF  103 (320)
Q Consensus        28 ~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~-~~l~s~~~dg~--v~iwd~~~~~~~~~~  103 (320)
                      ..++..++-+..+|.+....+..++. ......+ +. .....++.+..++ ..++.|+.-|.  +..|....-+.+..+
T Consensus       219 ~~~~~~~lL~~e~G~l~~l~l~~~~~-~i~i~~~-g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~  296 (504)
T PF10433_consen  219 DKDGDRILLQDEDGDLYLLTLDNDGG-SISITYL-GTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSL  296 (504)
T ss_dssp             STTSSEEEEEETTSEEEEEEEEEEEE-EEEEEEE-EE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE
T ss_pred             cCCCCEEEEEeCCCeEEEEEEEECCC-eEEEEEc-CCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEec
Confidence            45677888889999998887754332 1111111 22 3334455554332 37888887554  444443333445555


Q ss_pred             ccCccceeEEEEeeCC--CCC------EEEEEe---CCCeEEEEe
Q psy14961        104 HGHTGELMDLDLAPSE--TGN------TFVSGS---SDKLVNIWD  137 (320)
Q Consensus       104 ~~~~~~v~~~~~~~~~--~~~------~l~s~~---~dg~i~lwd  137 (320)
                      . .-+++.++++....  ...      .+++++   .+|.+++..
T Consensus       297 ~-N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr  340 (504)
T PF10433_consen  297 P-NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILR  340 (504)
T ss_dssp             -----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEE
T ss_pred             c-CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEe
Confidence            4 45778777775321  111      444443   467787763

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	320
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		1e-105
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		3e-72
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		3e-72
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		3e-72
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		3e-72
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		3e-72
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		3e-53
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		5e-28
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-22
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		2e-22
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-22
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-22
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-22
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-22
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-22
2gnq_A	336	Structure Of Wdr5 Length = 336		2e-22
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-22
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-22
2h9l_A	329	Wdr5delta23 Length = 329		2e-22
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-22
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		2e-22
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-22
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-22
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		3e-22
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		1e-21
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-21
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-09
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-20
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		3e-17
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		1e-14
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		3e-16
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		2e-07
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		6e-16
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		4e-08
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		6e-16
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		4e-08
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		6e-16
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		7e-08
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-15
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-12
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-15
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-12
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-15
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-12
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-15
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-12
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-15
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-12
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		2e-14
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		7e-13
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		1e-13
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-13
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		3e-13
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		6e-11
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		3e-13
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		6e-11
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		6e-13
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		1e-12
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		5e-11
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		2e-12
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		2e-12
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		5e-12
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		1e-07
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		7e-12
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		7e-12
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		4e-09
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		8e-12
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		3e-11
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		1e-08
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		2e-10
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		3e-10
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		4e-10
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		5e-10
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		3e-07
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		4e-06
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		3e-07
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		1e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		3e-07
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		1e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		4e-07
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		1e-04
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-06
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-04
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-06
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-04
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		5e-06
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		1e-05
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		1e-05
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		1e-05
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		2e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		1e-04
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		1e-04
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		2e-04
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		2e-04
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		3e-04
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		4e-04
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		5e-04
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		5e-04
3iiy_A	365	Crystal Structure Of Eed In Complex With A Trimethy		5e-04
3iiw_A	365	Crystal Structure Of Eed In Complex With A Trimethy		6e-04
3jzn_A	366	Structure Of Eed In Apo Form Length = 366		6e-04
4gqb_B	344	Crystal Structure Of The Human Prmt5:mep50 Complex		7e-04

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/291 (64%), Positives = 220/291 (75%), Gaps = 29/291 (9%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALE--DDSSAKK 58
           +I+WD  T  KEH+VTMP TWVMACAYAPSG  +A GGLDNK +VY +  +  ++ +AKK
Sbjct: 88  VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 147
Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           K+VA HT+++S C F NSD QILT SGD TCALWDVES QLLQSFHGH  +++ LDLAPS
Sbjct: 148 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 207
Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178
           ETGNTFVSG  DK   +WDMR+G CV                           Q+FE H+
Sbjct: 208 ETGNTFVSGGCDKKAMVWDMRSGQCV---------------------------QAFETHE 240
Query: 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238
           SDVNSV+++PSGDA A+GSDDATCRL+DLRAD+EVA Y K+SI+FGA+SVDFS+SGRLLF
Sbjct: 241 SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 300
Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           AGYNDYTINVWD LK  RV+ L GHENRVS L+VSPDGTAF SGSWD TLR
Sbjct: 301 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%), Gaps = 30/289 (10%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  K H++ + ++WVM CAYAPSG+ VA GGLDN  ++Y +   + +    + 
Sbjct: 90  LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 149
Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +A HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L LAP   
Sbjct: 150 LAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT- 207
Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              FVSG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 208 -RLFVSGACDASAKLWDVREGMCRQ---------------------------TFTGHESD 239
Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N++ F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AG
Sbjct: 240 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 299
Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 300 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 348

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%), Gaps = 30/289 (10%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  K H++ + ++WVM CAYAPSG+ VA GGLDN  ++Y +   + +    + 
Sbjct: 79  LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +A HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L LAP   
Sbjct: 139 LAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT- 196
Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              FVSG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RLFVSGACDASAKLWDVREGMCRQ---------------------------TFTGHESD 228
Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N++ F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AG
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288
Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%), Gaps = 30/289 (10%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  K H++ + ++WVM CAYAPSG+ VA GGLDN  ++Y +   + +    + 
Sbjct: 79  LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +A HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L LAP   
Sbjct: 139 LAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT- 196
Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              FVSG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RLFVSGACDASAKLWDVREGMCRQ---------------------------TFTGHESD 228
Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N++ F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AG
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288
Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%), Gaps = 30/289 (10%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  K H++ + ++WVM CAYAPSG+ VA GGLDN  ++Y +   + +    + 
Sbjct: 79  LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +A HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L LAP   
Sbjct: 139 LAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT- 196
Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              FVSG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RLFVSGACDASAKLWDVREGMCRQ---------------------------TFTGHESD 228
Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N++ F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AG
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288
Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%), Gaps = 30/289 (10%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           +IIWD  T  K H++ + ++WVM CAYAPSG+ VA GGLDN  ++Y +   + +    + 
Sbjct: 79  LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +A HT ++SCC F + D QI+T SGD TCALWD+E+ Q   +F GHTG++M L LAP   
Sbjct: 139 LAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT- 196
Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              FVSG+ D    +WD+R G C Q                           +F GH+SD
Sbjct: 197 -RLFVSGACDASAKLWDVREGMCRQ---------------------------TFTGHESD 228
Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           +N++ F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AG
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288
Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           Y+D+  NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 115/307 (37%), Positives = 168/307 (54%), Gaps = 45/307 (14%)
Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAK--- 57
           +I+W+ LT  K H++ +   WVM CA+AP+G  VA GGLD+  +++ ++ + D       
Sbjct: 90  LIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPV 149
Query: 58  KKTVATHTSFISCCIF-PNSDQQILTGSGDCTCALWDVESSQLLQSF-----HGHTGELM 111
            + +  H  + S C + P+ + +++TGSGD TC LWDV + Q +  F      GHT +++
Sbjct: 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209
Query: 112 DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV 171
            L +  S   N F+SGS D  V +WD+R                           T   V
Sbjct: 210 SLSIN-SLNANMFISGSCDTTVRLWDLRI--------------------------TSRAV 242
Query: 172 QSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY-----KKDSILFGAT 226
           +++ GH+ D+NSVKF P G    TGSDD TCRLFD+R   ++  Y     + D+ L   T
Sbjct: 243 RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVT 302
Query: 227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL----MGHENRVSCLQVSPDGTAFSSG 282
           SV FS+SGRLLFAGY++    VWD+L    V +L      HE R+SCL +S DG+A  +G
Sbjct: 303 SVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362
Query: 283 SWDTTLR 289
           SWD  L+
Sbjct: 363 SWDKNLK 369

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 29/295 (9%)
Query: 22  VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL 81
           V   A++P G  +AS   D  V ++     + +    +T+  H+S +    F    Q I 
Sbjct: 101 VRGVAFSPDGQTIASASDDKTVKLW-----NRNGQLLQTLTGHSSSVWGVAFSPDGQTIA 155
Query: 82  TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG 141
           + S D T  LW+  + QLLQ+  GH+  +  +  +P   G T  S S DK V +W+ R G
Sbjct: 156 SASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPD--GQTIASASDDKTVKLWN-RNG 211
Query: 142 YCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF 186
             +Q+  GH + +               +DDK V +W+ R G  +Q+  GH S VN V F
Sbjct: 212 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVNGVAF 270
Query: 187 HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTI 246
            P G  +A+ SDD T +L++             S ++G   V FS  G+ + +  +D T+
Sbjct: 271 RPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWG---VAFSPDGQTIASASDDKTV 327
Query: 247 NVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYL 301
            +W+      +  L GH + V  +  SPDG   +S S D T++      + +Q L
Sbjct: 328 KLWNR-NGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 381

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 19  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 76
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 77  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 136
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 137 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 193
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 194 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 250
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 251 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 284

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 14  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 71
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 72  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 131
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 188
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 189 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 245
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 246 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 279

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 20  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 77
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 78  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 137
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 138 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 194
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 195 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 251
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 252 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 285

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 20  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 77
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 78  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 137
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 138 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 194
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 195 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 251
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 252 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 285

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 13  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 70
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 71  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 130
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 131 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 187
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 188 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 244
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 245 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 278

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 20  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 77
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 78  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 137
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 138 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 194
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 195 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 251
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 252 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 285

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 15  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 72
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 73  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 132
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 133 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 189
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 190 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 246
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 247 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 280

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 38  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 95
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 96  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 155
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 156 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 212
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 213 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 269
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 270 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 303

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 14  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 71
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 72  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 131
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 188
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 189 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 245
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 246 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 279

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 36  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 93
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 94  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 153
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 154 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 210
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 267
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 268 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 301

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 31  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 88
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 89  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 148
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 149 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 205
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 206 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 262
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 263 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 296

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 27/272 (9%)
Query: 60  TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE 119
           T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+A S 
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVAWSS 78
Query: 120 TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWD 164
             N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V IWD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK--DSIL 222
           ++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   D   
Sbjct: 139 VKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDN 195
Query: 223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG 282
              + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    + + G
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FSVTGG 252
Query: 283 SWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            W   +   E    Y+  L    I +  QG T
Sbjct: 253 KW--IVSGSEDNMVYIWNLQTKEIVQKLQGHT 282

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 17  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 74
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 75  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 134
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 135 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 191
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 192 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 248
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 249 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 282

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 10  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 67
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 68  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 127
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 128 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 184
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 241
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 242 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 275

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + +   S D    +W     +  ++  GH  +L   D+
Sbjct: 17  ALKFTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGH--KLGISDV 74
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 75  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 134
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 135 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 191
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 192 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 248
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 249 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 282

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 56  AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           A K T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+
Sbjct: 17  ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDV 74
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV 160
           A S   N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V
Sbjct: 75  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 134
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK-- 218
            IWD++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   
Sbjct: 135 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLI 191
Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
           D      + V FS +G+ + A   D T+ +WD  K   +    GH+N   C+  +    +
Sbjct: 192 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FS 248
Query: 279 FSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            + G W   +   E    Y+  L    I +  QG T
Sbjct: 249 VTGGKW--IVSGSEDNLVYIWNLQTKEIVQKLQGHT 282

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 27/272 (9%)
Query: 60  TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE 119
           T+A HT  +S   F  + + + + S D    +W     +  ++  GH  +L   D+A S 
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGISDVAWSS 78
Query: 120 TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWD 164
             N  VS S DK + IWD+ +G C+++ +GH N +               + D+ V IWD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK--DSIL 222
           ++TG C+++   H   V++V F+  G  + + S D  CR++D  + +   C K   D   
Sbjct: 139 VKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDN 195
Query: 223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG 282
              + V FS +G+ + A   D  + +WD  K   +    GH+N   C+  +    + + G
Sbjct: 196 PPVSFVKFSPNGKYILAATLDNDLKLWDYSKGKCLKTYTGHKNEKYCIFAN---FSVTGG 252
Query: 283 SWDTTLRDEESKNRYVQYLLRSRITKPTQGLT 314
            W   +   E    Y+  L    I +  QG T
Sbjct: 253 KW--IVSGSEDNMVYIWNLQTKEIVQKLQGHT 282

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 57  KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLA 116
           +K  ++ H S ++  IF      +++ S D T  +WD E+    ++  GHT  + D+   
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF- 158
Query: 117 PSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH-HNL--------------ITDDKLVN 161
              +G    S S+D  + +WD +   C+++  GH HN+               + DK + 
Sbjct: 159 -DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217
Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF---------DLRADKE 212
           +W+++TGYCV++F GH+  V  V+ +  G  +A+ S+D T R++         +LR  + 
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH 277
Query: 213 V---------ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH 263
           V         + Y   S   G+ +      G  L +G  D TI +WD      +  L+GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 264 ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296
           +N V  +     G    S + D TLR  + KN+
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 173 SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS----V 228
           +  GH+S V  V FHP    + + S+DAT +++D     E   +++   L G T     +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY----ETGDFER--TLKGHTDSVQDI 156
Query: 229 DFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 286
            F  SG+LL +   D TI +WD    +C R  H  GH++ VS + + P+G    S S D 
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMH--GHDHNVSSVSIMPNGDHIVSASRDK 214
Query: 287 TLRDEESKNRY 297
           T++  E +  Y
Sbjct: 215 TIKMWEVQTGY 225

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 142/328 (43%), Gaps = 66/328 (20%)
Query: 20  TWVMACA-YAPSGSVVASGGLDNKVT-VYAIA-------LEDDSSAKKKTVATHTS---- 66
           T V+ C  ++  G  +A+G   NK T VY ++       L DDS+A K     +TS    
Sbjct: 64  TSVVCCVKFSNDGEYLATGC--NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 121
Query: 67  ---FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
              +I    F    + + TG+ D    +WD+E+ +++    GH  ++  LD  PS  G+ 
Sbjct: 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPS--GDK 179
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITD---------------DKLVNIWDMRTG 168
            VSGS D+ V IWD+RTG C  +      + T                D+ V +WD  TG
Sbjct: 180 LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG 239
Query: 169 YCVQSFE-------GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK---- 217
           + V+  +       GH+  V SV F   G +V +GS D + +L++L+     +  K    
Sbjct: 240 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 299
Query: 218 ----------KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV 267
                     KD +L  AT+ +       + +G  D  +  WD      +  L GH N V
Sbjct: 300 GTCEVTYIGHKDFVLSVATTQN----DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSV 355
Query: 268 SCLQVS------PDGTAFSSGSWDTTLR 289
             + V+      P+   F++GS D   R
Sbjct: 356 ISVAVANGSSLGPEYNVFATGSGDCKAR 383

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 28/191 (14%)
Query: 34  VASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93
           V SG  D  + V+ I    ++      +  H + + C  +    +++++G+ D    +WD
Sbjct: 212 VVSGSRDATLRVWDI----ETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWD 265
Query: 94  VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL 153
            E+   L +  GHT  +  L       G   VSGS D  + +WD+ TG C+ +  GH +L
Sbjct: 266 PETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 321
Query: 154 ITD-------------DKLVNIWDMRTGYCVQSFEG---HQSDVNSVKFHPSGDAVATGS 197
            +              D  V IWD++TG C+Q+ +G   HQS V  ++F+   + V T S
Sbjct: 322 TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSS 379
Query: 198 DDATCRLFDLR 208
           DD T +L+DL+
Sbjct: 380 DDGTVKLWDLK 390

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 31/237 (13%)
Query: 68  ISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG 127
           I+C  F  +  +I++GS D T  +W   + + L++  GHTG +    +      N  +SG
Sbjct: 122 ITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD----NIIISG 175
Query: 128 SSDKLVNIWDMRTGYCVQSFEGHHNLI-------------TDDKLVNIWDMRTGYCVQSF 174
           S+D+ + +W+  TG C+ +  GH + +             + D  + +WD+ TG C+   
Sbjct: 176 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL 235
Query: 175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS- 233
            GH + V  V++   G  V +G+ D   +++D   +    C      L G T+  +S+  
Sbjct: 236 MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE---TCL---HTLQGHTNRVYSLQF 287
Query: 234 -GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
            G  + +G  D +I VWD      ++ L GH++  S +++  +     SG+ D+T++
Sbjct: 288 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVK 342

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 3   IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA 62
           IW+  TQ +  S+ +  T V A  +    + +  G  D ++ V+      ++  K     
Sbjct: 39  IWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY----NTGEKVVDFE 94
Query: 63  THTSFISCCIFPNSDQQILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETG 121
            H  +I       +   +L+GS D T  LW+ E++  L Q+F GH   +M +   P +  
Sbjct: 95  AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP- 153
Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSF------EGHHNLI--------------TDDKLVN 161
           +TF SG  D+ V +W +  G    +F      E   N +              +DD  + 
Sbjct: 154 STFASGCLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211
Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           IWD +T  CV + EGH S+V+   FHP+   + +GS+D T ++++
Sbjct: 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 99/257 (38%), Gaps = 34/257 (13%)
Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           KKT +  +  +    F  ++  +LT        +W+ E+   ++S        + +   P
Sbjct: 6   KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRS--------IQVTETP 57
Query: 118 SETG------NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156
              G      N  + GS D  + +++  TG  V  FE H + I               +D
Sbjct: 58  VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 157 DKLVNIWDMRTGYCV-QSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVA 214
           D  V +W+    + + Q+FEGH+  V  V F+P   +  A+G  D T +++ L       
Sbjct: 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177
Query: 215 CYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272
                    G   VD+        +    +D TI +WD      V  L GH + VS    
Sbjct: 178 TLTTGQER-GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236
Query: 273 SPDGTAFSSGSWDTTLR 289
            P      SGS D TL+
Sbjct: 237 HPTLPIIISGSEDGTLK 253

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 3   IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA 62
           +W+  TQ +  S+ +  T V A  +    + +  G  D ++ V+      ++  K     
Sbjct: 39  LWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY----NTGEKVVDFE 94
Query: 63  THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL-QSFHGHTGELMDLDLAPSETG 121
            H  +I       +   +L+GS D T  LW+ E++  L Q+F GH   +M +   P +  
Sbjct: 95  AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP- 153
Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSF------EGHHNLI--------------TDDKLVN 161
           +TF SG  D+ V +W +  G    +F      E   N +              +DD  + 
Sbjct: 154 STFASGCLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211
Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           IWD +T  CV + EGH S+V+   FHP+   + +GS+D T ++++
Sbjct: 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 103/270 (38%), Gaps = 34/270 (12%)
Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           KKT +  +  +    F  ++  +LT        LW+ E+   ++S        + +   P
Sbjct: 6   KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS--------IQVTETP 57
Query: 118 SETG------NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156
              G      N  + GS D  + +++  TG  V  FE H + I               +D
Sbjct: 58  VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 157 DKLVNIWDMRTGYCV-QSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVA 214
           D  V +W+    + + Q+FEGH+  V  V F+P   +  A+G  D T +++ L       
Sbjct: 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177
Query: 215 CYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272
                    G   VD+        +    +D TI +WD      V  L GH + VS    
Sbjct: 178 TLTTGQER-GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236
Query: 273 SPDGTAFSSGSWDTTLRDEESKNRYVQYLL 302
            P      SGS D TL+   S    V+  L
Sbjct: 237 HPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 3   IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA 62
           +W+  TQ +  S+ +  T V A  +    + +  G  D ++ V+      ++  K     
Sbjct: 39  LWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY----NTGEKVVDFE 94
Query: 63  THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL-QSFHGHTGELMDLDLAPSETG 121
            H  +I       +   +L+GS D T  LW+ E++  L Q+F GH   +M +   P +  
Sbjct: 95  AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP- 153
Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSF------EGHHNLI--------------TDDKLVN 161
           +TF SG  D+ V +W +  G    +F      E   N +              +DD  + 
Sbjct: 154 STFASGCLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211
Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           IWD +T  CV + EGH S+V+   FHP+   + +GS+D T ++++
Sbjct: 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 103/270 (38%), Gaps = 34/270 (12%)
Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           KKT +  +  +    F  ++  +LT        LW+ E+   ++S        + +   P
Sbjct: 6   KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS--------IQVTETP 57
Query: 118 SETG------NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156
              G      N  + GS D  + +++  TG  V  FE H + I               +D
Sbjct: 58  VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 157 DKLVNIWDMRTGYCV-QSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVA 214
           D  V +W+    + + Q+FEGH+  V  V F+P   +  A+G  D T +++ L       
Sbjct: 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177
Query: 215 CYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272
                    G   VD+        +    +D TI +WD      V  L GH + VS    
Sbjct: 178 TLTTGQER-GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236
Query: 273 SPDGTAFSSGSWDTTLRDEESKNRYVQYLL 302
            P      SGS D TL+   S    V+  L
Sbjct: 237 HPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 3   IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA 62
           +W+  TQ +  S+ +  T V A  +    + +  G  D ++ V+      ++  K     
Sbjct: 39  LWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY----NTGEKVVDFE 94
Query: 63  THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL-QSFHGHTGELMDLDLAPSETG 121
            H  +I       +   +L+GS D T  LW+ E++  L Q+F GH   +M +   P +  
Sbjct: 95  AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP- 153
Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSF------EGHHNLI--------------TDDKLVN 161
           +TF SG  D+ V +W +  G    +F      E   N +              +DD  + 
Sbjct: 154 STFASGCLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211
Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           IWD +T  CV + EGH S+V+   FHP+   + +GS+D T ++++
Sbjct: 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 99/257 (38%), Gaps = 34/257 (13%)
Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           KKT +  +  +    F  ++  +LT        LW+ E+   ++S        + +   P
Sbjct: 6   KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS--------IQVTETP 57
Query: 118 SETG------NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156
              G      N  + GS D  + +++  TG  V  FE H + I               +D
Sbjct: 58  VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 157 DKLVNIWDMRTGYCV-QSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVA 214
           D  V +W+    + + Q+FEGH+  V  V F+P   +  A+G  D T +++ L       
Sbjct: 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177
Query: 215 CYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272
                    G   VD+        +    +D TI +WD      V  L GH + VS    
Sbjct: 178 TLTTGQER-GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236
Query: 273 SPDGTAFSSGSWDTTLR 289
            P      SGS D TL+
Sbjct: 237 HPTLPIIISGSEDGTLK 253

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 70/253 (27%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H+  +  C         L+ S D T  LWDV + +  Q F GH  ++M +D+   +  + 
Sbjct: 58  HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDI--DKKASM 115
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------------DDKLVNI 162
            +SGS DK + +W ++ G C+ +  GH++ ++                     +DK+V  
Sbjct: 116 IISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 174
Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222
           W++        F GH S++N++   P G  +A+   D    L++L A K +        +
Sbjct: 175 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 234
Query: 223 FG----------------------------------------------ATSVDFSVSGRL 236
           F                                               A S+ +S  G+ 
Sbjct: 235 FSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQT 294
Query: 237 LFAGYNDYTINVW 249
           LFAGY D  I VW
Sbjct: 295 LFAGYTDNVIRVW 307

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNL 153
           L  +  GH G +  L  +  +  N  +S S DK +  W     D + G  V+SF+GH ++
Sbjct: 3   LRGTLEGHNGWVTSLATSAGQP-NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI 61
Query: 154 ITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
           + D               DK + +WD+ TG   Q F GH+SDV SV        + +GS 
Sbjct: 62  VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR 121
Query: 199 DATCRLFDLRADKEVACYKKD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252
           D T +++ ++          +       ++    + D SV+  ++ AG ND  +  W+  
Sbjct: 122 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT--IISAG-NDKMVKAWNLN 178
Query: 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +       +GH + ++ L  SPDGT  +S   D
Sbjct: 179 QFQIEADFIGHNSNINTLTASPDGTLIASAGKD 211

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 70/253 (27%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H+  +  C         L+ S D T  LWDV + +  Q F GH  ++M +D+   +  + 
Sbjct: 64  HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDI--DKKASM 121
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------------DDKLVNI 162
            +SGS DK + +W ++ G C+ +  GH++ ++                     +DK+V  
Sbjct: 122 IISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180
Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222
           W++        F GH S++N++   P G  +A+   D    L++L A K +        +
Sbjct: 181 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240
Query: 223 FG----------------------------------------------ATSVDFSVSGRL 236
           F                                               A S+ +S  G+ 
Sbjct: 241 FSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQT 300
Query: 237 LFAGYNDYTINVW 249
           LFAGY D  I VW
Sbjct: 301 LFAGYTDNVIRVW 313

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNL 153
           L  +  GH G +  L  +  +  N  +S S DK +  W     D + G  V+SF+GH ++
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQP-NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI 67
Query: 154 ITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
           + D               DK + +WD+ TG   Q F GH+SDV SV        + +GS 
Sbjct: 68  VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR 127
Query: 199 DATCRLFDLRADKEVACYKKD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252
           D T +++ ++          +       ++    + D SV+  ++ AG ND  +  W+  
Sbjct: 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT--IISAG-NDKMVKAWNLN 184
Query: 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +       +GH + ++ L  SPDGT  +S   D
Sbjct: 185 QFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 70/253 (27%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H+  +  C         L+ S D T  LWDV + +  Q F GH  ++M +D+   +  + 
Sbjct: 64  HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDI--DKKASM 121
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------------DDKLVNI 162
            +SGS DK + +W ++ G C+ +  GH++ ++                     +DK+V  
Sbjct: 122 IISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180
Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222
           W++        F GH S++N++   P G  +A+   D    L++L A K +        +
Sbjct: 181 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240
Query: 223 FG----------------------------------------------ATSVDFSVSGRL 236
           F                                               A S+ +S  G+ 
Sbjct: 241 FSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQT 300
Query: 237 LFAGYNDYTINVW 249
           LFAGY D  I VW
Sbjct: 301 LFAGYTDNVIRVW 313

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNL 153
           L  +  GH G +  L  +  +  N  +S S DK +  W     D + G  V+SF+GH ++
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQP-NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI 67
Query: 154 ITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
           + D               DK + +WD+ TG   Q F GH+SDV SV        + +GS 
Sbjct: 68  VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR 127
Query: 199 DATCRLFDLRADKEVACYKKD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252
           D T +++ ++          +       ++    + D SV+  ++ AG ND  +  W+  
Sbjct: 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT--IISAG-NDKMVKAWNLN 184
Query: 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +       +GH + ++ L  SPDGT  +S   D
Sbjct: 185 QFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 70/253 (27%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H+  +  C         L+ S D T  LWDV + +  Q F GH  ++M +D+   +  + 
Sbjct: 64  HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDI--DKKASM 121
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------------DDKLVNI 162
            +SGS DK + +W ++ G C+ +  GH++ ++                     +DK+V  
Sbjct: 122 IISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180
Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222
           W++        F GH S++N++   P G  +A+   D    L++L A K +        +
Sbjct: 181 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240
Query: 223 FG----------------------------------------------ATSVDFSVSGRL 236
           F                                               A S+ +S  G+ 
Sbjct: 241 FSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQT 300
Query: 237 LFAGYNDYTINVW 249
           LFAGY D  I VW
Sbjct: 301 LFAGYTDNVIRVW 313

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNL 153
           L  +  GH G +  L  +  +  N  +S S DK +  W     D + G  V+SF+GH ++
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQP-NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI 67
Query: 154 ITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
           + D               DK + +WD+ TG   Q F GH+SDV SV        + +GS 
Sbjct: 68  VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR 127
Query: 199 DATCRLFDLRADKEVACYKKD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252
           D T +++ ++          +       ++    + D SV+  ++ AG ND  +  W+  
Sbjct: 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT--IISAG-NDKMVKAWNLN 184
Query: 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +       +GH + ++ L  SPDGT  +S   D
Sbjct: 185 QFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 70/253 (27%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H+  +  C         L+ S D T  LWDV + +  Q F GH  ++M +D+   +  + 
Sbjct: 64  HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDI--DKKASM 121
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------------DDKLVNI 162
            +SGS DK + +W ++ G C+ +  GH++ ++                     +DK+V  
Sbjct: 122 IISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180
Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222
           W++        F GH S++N++   P G  +A+   D    L++L A K +        +
Sbjct: 181 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240
Query: 223 FG----------------------------------------------ATSVDFSVSGRL 236
           F                                               A S+ +S  G+ 
Sbjct: 241 FSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSAAAEPHAVSLAWSADGQT 300
Query: 237 LFAGYNDYTINVW 249
           LFAGY D  I VW
Sbjct: 301 LFAGYTDNVIRVW 313

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNL 153
           L  +  GH G +  L  +  +  N  +S S DK +  W     D + G  V+SF+GH ++
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQP-NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI 67
Query: 154 ITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
           + D               DK + +WD+ TG   Q F GH+SDV SV        + +GS 
Sbjct: 68  VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR 127
Query: 199 DATCRLFDLRADKEVACYKKD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252
           D T +++ ++          +       ++    + D SV+  ++ AG ND  +  W+  
Sbjct: 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT--IISAG-NDKMVKAWNLN 184
Query: 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +       +GH + ++ L  SPDGT  +S   D
Sbjct: 185 QFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 96/254 (37%), Gaps = 72/254 (28%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H+  +  C         L+ S D T  LWDV + +  Q F GH  ++  +D+   +  + 
Sbjct: 64  HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDI--DKKASX 121
Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT---------------------DDKLVNI 162
            +SGS DK + +W ++ G C+ +  GH++ ++                     +DK V  
Sbjct: 122 IISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKA 180
Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK----------- 211
           W++        F GH S++N++   P G  +A+   D    L++L A K           
Sbjct: 181 WNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTLSAQDEV 240
Query: 212 ------------------------------------EVACYKKDSILFGATSVDFSVSGR 235
                                               E A Y K +    A S+ +S  G+
Sbjct: 241 FSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPH-AVSLAWSADGQ 299
Query: 236 LLFAGYNDYTINVW 249
            LFAGY D  I VW
Sbjct: 300 TLFAGYTDNVIRVW 313

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNL 153
           L  +  GH G +  L  +  +  N  +S S DK +  W     D + G  V+SF+GH ++
Sbjct: 9   LRGTLEGHNGWVTSLATSAGQP-NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI 67
Query: 154 ITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
           + D               DK + +WD+ TG   Q F GH+SDV SV        + +GS 
Sbjct: 68  VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSR 127
Query: 199 DATCRLFDLRADKEVACYKKD------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252
           D T +++ ++          +       ++    + D SV+  ++ AG ND  +  W+  
Sbjct: 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT--IISAG-NDKXVKAWNLN 184
Query: 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +       +GH + ++ L  SPDGT  +S   D
Sbjct: 185 QFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 43/304 (14%)
Query: 24  ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG 83
           AC ++  G  +AS G D  + V+    + ++  K   +  H   + CC F + D  I T 
Sbjct: 628 AC-FSQDGQRIASCGADKTLQVF----KAETGEKLLDIKAHEDEVLCCAFSSDDSYIATC 682
Query: 84  SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC 143
           S D    +WD  + +L+ ++  H+ ++               +GS+D  + +WD+    C
Sbjct: 683 SADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 742
Query: 144 VQSFEGHHNLIT------DDKL---------VNIWDMRTGYCVQSF---------EGHQS 179
             +  GH N +       DD+L         + +WD+R+    +S          E    
Sbjct: 743 RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 802
Query: 180 DVNSV----KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV----DFS 231
           DV  +     +   GD +   + +    LFD+     +A      I  G  S     DFS
Sbjct: 803 DVEVIVKCCSWSADGDKIIVAAKNKVL-LFDIHTSGLLA-----EIHTGHHSTIQYCDFS 856
Query: 232 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE 291
               L     + Y + +W+     +V    GH + V  +  SPDG++F + S D T+R  
Sbjct: 857 PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVW 916
Query: 292 ESKN 295
           E+K 
Sbjct: 917 ETKK 920

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 43/304 (14%)
Query: 24  ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG 83
           AC ++  G  +AS G D  + V+    + ++  K   +  H   + CC F + D  I T 
Sbjct: 621 AC-FSQDGQRIASCGADKTLQVF----KAETGEKLLDIKAHEDEVLCCAFSSDDSYIATC 675
Query: 84  SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC 143
           S D    +WD  + +L+ ++  H+ ++               +GS+D  + +WD+    C
Sbjct: 676 SADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735
Query: 144 VQSFEGHHNLIT------DDKL---------VNIWDMRTGYCVQSF---------EGHQS 179
             +  GH N +       DD+L         + +WD+R+    +S          E    
Sbjct: 736 RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 795
Query: 180 DVNSV----KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV----DFS 231
           DV  +     +   GD +   + +    LFD+     +A      I  G  S     DFS
Sbjct: 796 DVEVIVKCCSWSADGDKIIVAAKNKVL-LFDIHTSGLLA-----EIHTGHHSTIQYCDFS 849
Query: 232 VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDE 291
               L     + Y + +W+     +V    GH + V  +  SPDG++F + S D T+R  
Sbjct: 850 PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVW 909
Query: 292 ESKN 295
           E+K 
Sbjct: 910 ETKK 913

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 71/297 (23%)
Query: 21  WVMACAYAPS-GSVVASGGLDNKVTVYAIAL-EDDSSAKKKTVATHTSFISCCIFPNSDQ 78
           WV   A  P    ++ S   D  + ++ +   E +    ++ +  H+ F+S  +  +  Q
Sbjct: 40  WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ 99
Query: 79  QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
             L+GS D T  LWD+ +    + F GHT ++  L +A S      VSGS DK + +W+ 
Sbjct: 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV--LSVAFSSDNRQIVSGSRDKTIKLWNT 157
Query: 139 RT--GYCVQSFEGHHNLIT-----------------DDKLVNIWDMRTGYCVQSFEGHQS 179
                Y VQ  E H   ++                  DKLV +W++       +  GH  
Sbjct: 158 LGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG 216
Query: 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV-----------ACYKKDSILFGA--- 225
            +N+V   P G   A+G  D    L+DL   K +            C+  +     A   
Sbjct: 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG 276
Query: 226 ---------------------------------TSVDFSVSGRLLFAGYNDYTINVW 249
                                            TS+ +S  G+ LFAGY D  + VW
Sbjct: 277 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 333

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 95  ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM---RTGYCV--QSFEG 149
           E   L  +  GH G +  +   P +  +  +S S DK + +W +    T Y +  ++  G
Sbjct: 26  EQMTLRGTLKGHNGWVTQIATTP-QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 84
Query: 150 HHNLITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA 194
           H + ++D               D  + +WD+ TG   + F GH  DV SV F      + 
Sbjct: 85  HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 144
Query: 195 TGSDDATCRLFD-LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK 253
           +GS D T +L++ L   K     +  S          + S  ++ +   D  + VW+   
Sbjct: 145 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 204
Query: 254 C-CRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           C  + NH+ GH   ++ + VSPDG+  +SG  D
Sbjct: 205 CKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKD 236

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 71/297 (23%)
Query: 21  WVMACAYAPS-GSVVASGGLDNKVTVYAIAL-EDDSSAKKKTVATHTSFISCCIFPNSDQ 78
           WV   A  P    ++ S   D  + ++ +   E +    ++ +  H+ F+S  +  +  Q
Sbjct: 17  WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ 76
Query: 79  QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
             L+GS D T  LWD+ +    + F GHT ++  L +A S      VSGS DK + +W+ 
Sbjct: 77  FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV--LSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 139 RT--GYCVQSFEGHHNLIT-----------------DDKLVNIWDMRTGYCVQSFEGHQS 179
                Y VQ  E H   ++                  DKLV +W++       +  GH  
Sbjct: 135 LGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG 193
Query: 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV-----------ACYKKDSILFGA--- 225
            +N+V   P G   A+G  D    L+DL   K +            C+  +     A   
Sbjct: 194 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG 253
Query: 226 ---------------------------------TSVDFSVSGRLLFAGYNDYTINVW 249
                                            TS+ +S  G+ LFAGY D  + VW
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 95  ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM---RTGYCV--QSFEG 149
           E   L  +  GH G +  +   P +  +  +S S DK + +W +    T Y +  ++  G
Sbjct: 3   EQMTLRGTLKGHNGWVTQIATTP-QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 150 HHNLITD---------------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA 194
           H + ++D               D  + +WD+ TG   + F GH  DV SV F      + 
Sbjct: 62  HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 195 TGSDDATCRLFD-LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK 253
           +GS D T +L++ L   K     +  S          + S  ++ +   D  + VW+   
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 254 C-CRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           C  + NH+ GH   ++ + VSPDG+  +SG  D
Sbjct: 182 CKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKD 213

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 67/255 (26%)
Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS 118
           + +  H++F+S     N+    ++ S D +  LW++++ Q    F GHT +++ +  +P 
Sbjct: 61  RRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPD 120
Query: 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EGHHN---------------LITD---DKL 159
                 VSG  D  + +W+++ G C+ +   G H                +I     D L
Sbjct: 121 N--RQIVSGGRDNALRVWNVK-GECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNL 177
Query: 160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL---RADKEVA-- 214
           V +WD+ TG  V   +GH + V SV   P G   A+   D   RL+DL    A  E+A  
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAG 237
Query: 215 ------CYKKD----------------------------------SILFGATSVDFSVSG 234
                 C+  +                                   I+    S+ +S  G
Sbjct: 238 APINQICFSPNRYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADG 297
Query: 235 RLLFAGYNDYTINVW 249
             L++GY D  I VW
Sbjct: 298 STLYSGYTDNVIRVW 312

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 105 GHTGELMDLDLAPS-ETGNTFVSGSSDKLVNIW----DMRTGYCV-----QSFEGHHNLI 154
           GH G +  L    + ET    VS S DK +  W    D  +  C      +  EGH   +
Sbjct: 11  GHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSAFV 70
Query: 155 TDDKLVN---------------IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD 199
           +D  L N               +W+++ G C   F GH  DV SV F P    + +G  D
Sbjct: 71  SDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRD 130
Query: 200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVS--GRLLFAGYNDYTINVWDSLKCCRV 257
              R+++++ +  +    + +     + V FS S    ++ +G  D  + VWD      V
Sbjct: 131 NALRVWNVKGEC-MHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLV 189
Query: 258 NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
             L GH N V+ + VSPDG+  +S   D   R
Sbjct: 190 TDLKGHTNYVTSVTVSPDGSLCASSDKDGVAR 221

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 37/205 (18%)
Query: 118 SETGNTFVSGSSDKLVNIWDM----RTGYCV---QSFEGHHNLITD-------------- 156
           +E     +SGS DK V IW +    + GY     ++  GH++ ++D              
Sbjct: 36  NEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95
Query: 157 -DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL-------R 208
            DK + +WD+RTG   + F GHQS+V SV F P    + +   +   +L+++        
Sbjct: 96  WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSS 155
Query: 209 ADKE-----VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH 263
           A+KE     V+C +   I+  A  V    +      G+ D  + VW++    R      H
Sbjct: 156 AEKENHSDWVSCVRYSPIMKSANKVQ-PFAPYFASVGW-DGRLKVWNTNFQIRYT-FKAH 212
Query: 264 ENRVSCLQVSPDGTAFSSGSWDTTL 288
           E+ V+ L +SP+G   ++G  D  L
Sbjct: 213 ESNVNHLSISPNGKYIATGGKDKKL 237

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 54/269 (20%)
Query: 57  KKKTVATH-TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           ++ T+  H TS I+C  F   D  ++TG+ D    ++D  + + L    GH G +  L  
Sbjct: 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY 170
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175
           A    G   VSGS+D+ V +WD++ G C   FEGH++ +               C+   E
Sbjct: 171 AH---GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR--------------CLDIVE 213
Query: 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---------------- 219
                  ++K+      + TGS D T  ++ L  +  V  + ++                
Sbjct: 214 -----YKNIKY------IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262
Query: 220 -SILFGATSVDFSVSGR--LLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSP 274
             +L G  +   +VSG   ++ +G  D T+ VWD   +KC  +  L GH +R+       
Sbjct: 263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI--LSGHTDRIYSTIYDH 320
Query: 275 DGTAFSSGSWDTTLRDEESKNRYVQYLLR 303
           +     S S DTT+R  + +N  + Y L+
Sbjct: 321 ERKRCISASMDTTIRIWDLENGELMYTLQ 349

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 40/253 (15%)
Query: 26  AYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQILTGS 84
           A+ P+G+++AS G D ++ ++    E DS   K  ++  H   +    +      + + S
Sbjct: 23  AWNPAGTLLASCGGDRRIRIWGT--EGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS 80
Query: 85  GDCTCALW--DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY 142
            D T  +W  + +  + + +  GH  E+  +  APS  GN   + S DK V +W++    
Sbjct: 81  FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEV---- 134
Query: 143 CVQSFEGHHNLITDDKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT 201
                                D    Y CV     H  DV  V +HPS + +A+ S D T
Sbjct: 135 ---------------------DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDT 173
Query: 202 CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM 261
            +L+    D  V C   +       S+ F  SG+ L +  +D T+ +W         +L 
Sbjct: 174 VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR-------QYLP 226
Query: 262 GHENRVSCLQVSP 274
           G+E  V+C    P
Sbjct: 227 GNEQGVACSGSDP 239

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 115 LAPSETGNTFVSGSSDKLVNIWDMR-TGYCVQSF--EGHHNLITD--------------- 156
           LA +  G    S   D+ + IW      +  +S   EGH   +                 
Sbjct: 22  LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 157 DKLVNIWDMRTG--YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA 214
           D    IW        CV + EGH+++V SV + PSG+ +AT S D +  ++++  + E  
Sbjct: 82  DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 215 CYKKDSILFGATS----VDFSVSGRLLFAGYNDYTINVW----DSLKCCRVNHLMGHENR 266
           C    S+L   T     V +  S  LL +   D T+ ++    D   CC    L GHE+ 
Sbjct: 142 CV---SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT--LEGHEST 196
Query: 267 VSCLQVSPDGTAFSSGSWDTTLR 289
           V  L   P G   +S S D T+R
Sbjct: 197 VWSLAFDPSGQRLASCSDDRTVR 219

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 48/239 (20%)
Query: 77  DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW 136
           DQ+I++G  D T  +WD  + +  +   GHTG ++ L           ++GSSD  V +W
Sbjct: 143 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE----RVIITGSSDSTVRVW 198
Query: 137 DMRTGYCVQSFEGHHNLI-------------TDDKLVNIWDMRTGYCV---QSFEGHQSD 180
           D+ TG  + +   H   +             + D+ + +WDM +   +   +   GH++ 
Sbjct: 199 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 258
Query: 181 VNSVKF------HPSGDAVATGSDDATCRLFD-LRADKE-VACYKKDSILFGATSVDFSV 232
           VN V F        SGD      + +TC     L   K  +AC                 
Sbjct: 259 VNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--------------LQY 304
Query: 233 SGRLLFAGYNDYTINVWDSL--KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
             RL+ +G +D TI +WD     C RV  L GHE  V C++   D     SG++D  ++
Sbjct: 305 RDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRF--DNKRIVSGAYDGKIK 359

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 33  VVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL 91
           ++ S   D  + ++ +  +D +    ++ +  H+ F+   +  +  Q  L+GS D    L
Sbjct: 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456
Query: 92  WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---- 147
           WD+ +    + F GHT ++  L +A S      VS S D+ + +W+   G C  +     
Sbjct: 457 WDLAAGVSTRRFVGHTKDV--LSVAFSLDNRQIVSASRDRTIKLWNT-LGECKYTISEGG 513
Query: 148 EGHHNLIT-----------------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG 190
           EGH + ++                  DK V +W++       +  GH   V++V   P G
Sbjct: 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 573
Query: 191 DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 250
              A+G  D    L+DL   K++   + +S++    ++ FS   R       ++ I +WD
Sbjct: 574 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIH---ALCFS-PNRYWLCAATEHGIKIWD 629

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 25/193 (12%)
Query: 117 PSETGNTFVSGSSDKLVNIW-----DMRTGYCVQSFEGHHNLITD--------------- 156
           P +  +  VS S DK + +W     D   G   +   GH + + D               
Sbjct: 391 PIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 450
Query: 157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-KEVAC 215
           D  + +WD+  G   + F GH  DV SV F      + + S D T +L++   + K    
Sbjct: 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS 510
Query: 216 YKKDSILFGATSVDFS---VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272
              +      + V FS   +   ++ A + D T+ VW+   C   + L GH   VS + V
Sbjct: 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASW-DKTVKVWNLSNCKLRSTLAGHTGYVSTVAV 569
Query: 273 SPDGTAFSSGSWD 285
           SPDG+  +SG  D
Sbjct: 570 SPDGSLCASGGKD 582

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 54/269 (20%)
Query: 57  KKKTVATH-TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDL 115
           ++ T+  H TS I+C  F   D  ++TG+ D    ++D  + + L    GH G +  L  
Sbjct: 113 QRTTLRGHXTSVITCLQF--EDNYVITGADDKXIRVYDSINKKFLLQLSGHDGGVWALKY 170
Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175
           A    G   VSGS+D+ V +WD++ G C   FEGH++ +               C+   E
Sbjct: 171 AH---GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR--------------CLDIVE 213
Query: 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---------------- 219
                  ++K+      + TGS D T  ++ L  +  V  + ++                
Sbjct: 214 -----YKNIKY------IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262
Query: 220 -SILFGATSVDFSVSGR--LLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSP 274
             +L G  +   +VSG   ++ +G  D T+ VWD    KC  +  L GH +R+       
Sbjct: 263 VGVLRGHXASVRTVSGHGNIVVSGSYDNTLIVWDVAQXKCLYI--LSGHTDRIYSTIYDH 320
Query: 275 DGTAFSSGSWDTTLRDEESKNRYVQYLLR 303
           +     S S DTT+R  + +N  + Y L+
Sbjct: 321 ERKRCISASXDTTIRIWDLENGELXYTLQ 349

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 11  KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISC 70
           KE+S+     ++++ AY+P G  +ASG +D  + ++ IA    +     T+  H   I  
Sbjct: 156 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA----TGKLLHTLEGHAMPIRS 211
Query: 71  CIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD 130
             F    Q ++T S D    ++DV+ + L  +  GH   ++++   P +T          
Sbjct: 212 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT---------- 261
Query: 131 KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG 190
                              H    + DK V +WD+ T  CV +F  HQ  V  VK++ +G
Sbjct: 262 -------------------HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 302
Query: 191 DAVATGSDDATCRLFD 206
             + +  DD    ++D
Sbjct: 303 SKIVSVGDDQEIHIYD 318

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 19/188 (10%)
Query: 119 ETGNTFVSGSSDKLVNIWDMRTGY--CVQSFEGH----------HNLITD-----DKLVN 161
           E   T V+GS D LV +W  R        S EGH          H L        D  + 
Sbjct: 46  ENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105
Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI 221
           +WD+  G  ++S +    D  ++ F P    +ATG+      +F + + K+   Y  D+ 
Sbjct: 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK--EYSLDTR 163
Query: 222 LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSS 281
                S+ +S  G+ L +G  D  IN++D      ++ L GH   +  L  SPD     +
Sbjct: 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 223
Query: 282 GSWDTTLR 289
            S D  ++
Sbjct: 224 ASDDGYIK 231

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 30  SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC 89
           SG+V+A   LDN V +++ +  D    +   +     +IS   +      +  G+     
Sbjct: 126 SGNVLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 182
Query: 90  ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV--SGSSDKLVNIWDMRTG-YCVQS 146
            LWDV+  + L++   H+  +  L      + N+++  SGS    ++  D+R   + V +
Sbjct: 183 QLWDVQQQKRLRNMTSHSARVGSL------SWNSYILSSGSRSGHIHHHDVRVAEHHVAT 236
Query: 147 FEGHHNLI---------------TDDKLVNIWDMRTG----YCVQSFEGHQSDVNSVKFH 187
             GH   +                +D LVN+W    G      +Q+F  HQ  V +V + 
Sbjct: 237 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC 296
Query: 188 P-SGDAVATG--SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-- 242
           P   + +ATG  + D   R++++ +    AC           S+ +S   + L +G+   
Sbjct: 297 PWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAVDAHSQVCSILWSPHYKELISGHGFA 353
Query: 243 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
              + +W      +V  L GH +RV  L +SPDG   +S + D TLR
Sbjct: 354 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 400

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 30  SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC 89
           SG+V+A   LDN V +++ +  D    +   +     +IS   +      +  G+     
Sbjct: 115 SGNVLAVA-LDNSVYLWSASSGDI--LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 171
Query: 90  ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV--SGSSDKLVNIWDMRTG-YCVQS 146
            LWDV+  + L++   H+  +  L      + N+++  SGS    ++  D+R   + V +
Sbjct: 172 QLWDVQQQKRLRNMTSHSARVGSL------SWNSYILSSGSRSGHIHHHDVRVAEHHVAT 225
Query: 147 FEGHHNLI---------------TDDKLVNIWDMRTG----YCVQSFEGHQSDVNSVKFH 187
             GH   +                +D LVN+W    G      +Q+F  HQ  V +V + 
Sbjct: 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC 285
Query: 188 P-SGDAVATG--SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-- 242
           P   + +ATG  + D   R++++ +    AC           S+ +S   + L +G+   
Sbjct: 286 PWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAVDAHSQVCSILWSPHYKELISGHGFA 342
Query: 243 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
              + +W      +V  L GH +RV  L +SPDG   +S + D TLR
Sbjct: 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 30  SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC 89
           SG+V+A   LDN V +++ +  D    +   +     +IS   +      +  G+     
Sbjct: 35  SGNVLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 91
Query: 90  ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV--SGSSDKLVNIWDMRTG-YCVQS 146
            LWDV+  + L++   H+  +  L      + N+++  SGS    ++  D+R   + V +
Sbjct: 92  QLWDVQQQKRLRNMTSHSARVGSL------SWNSYILSSGSRSGHIHHHDVRVAEHHVAT 145
Query: 147 FEGHHNLI---------------TDDKLVNIWDMRTG----YCVQSFEGHQSDVNSVKFH 187
             GH   +                +D LVN+W    G      +Q+F  HQ  V +V + 
Sbjct: 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC 205
Query: 188 P-SGDAVATG--SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-- 242
           P   + +ATG  + D   R++++ +    AC           S+ +S   + L +G+   
Sbjct: 206 PWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAVDAHSQVCSILWSPHYKELISGHGFA 262
Query: 243 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
              + +W      +V  L GH +RV  L +SPDG   +S + D TLR
Sbjct: 263 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 309

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 27  YAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG 83
           Y     ++  GG D   N V ++A + ED       T+  H    + C     D  +++G
Sbjct: 67  YDSEKELLLFGGKDTXINGVPLFATSGED----PLYTLIGHQG--NVCSLSFQDGVVISG 120
Query: 84  SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC 143
           S D T  +W  +   L+ +   H   + D  +  S + N F++ S+DK + +W  +    
Sbjct: 121 SWDKTAKVW--KEGSLVYNLQAHNASVWDAKVV-SFSENKFLTASADKTIKLW--QNDKV 175
Query: 144 VQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP 188
           +++F G HN +               ++D L+ + D  TG  ++++EGH+S V  +K  P
Sbjct: 176 IKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDXHTGDVLRTYEGHESFVYCIKLLP 235
Query: 189 SGDAVATGSDDATCRLF 205
           +GD V+ G +D T R++
Sbjct: 236 NGDIVSCG-EDRTVRIW 251

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 32  SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCA 90
           S+  S   D K+ ++     +++S    +V  HT+ ++C  F P S+  + TGS D T A
Sbjct: 241 SLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 91  LWDVESSQL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
           LWD+ + +L L SF  H  E+  +  +P        S  +D+ +N+WD+
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLNVWDL 347

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 46/198 (23%)
Query: 84  SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM----R 139
           SG+C   L             GH  E   L   P+ +G+  +S S D  + +WD+    +
Sbjct: 164 SGECNPDL----------RLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAVPK 212
Query: 140 TGYCVQS---FEGH---------HNL-------ITDDKLVNIWDMR---TGYCVQSFEGH 177
            G  V +   F GH         H L       + DD+ + IWD R   T     S + H
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAH 272
Query: 178 QSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADK-EVACYK--KDSILFGATSVDFSVS 233
            ++VN + F+P  + + ATGS D T  L+DLR  K ++  ++  KD I      V +S  
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF----QVQWSPH 328
Query: 234 GRLLFAGY-NDYTINVWD 250
              + A    D  +NVWD
Sbjct: 329 NETILASSGTDRRLNVWD 346

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 32  SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCA 90
           S+  S   D K+ ++     +++S    TV  HT+ ++C  F P S+  + TGS D T A
Sbjct: 249 SLFGSVADDQKLMIWDTR-NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 307
Query: 91  LWDVESSQL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
           LWD+ + +L L SF  H  E+  +  +P        S  +D+ +++WD+
Sbjct: 308 LWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDL 355

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLV 133
           PN +  +L+ S D T  LWD+ ++           E   +D     TG+T V        
Sbjct: 195 PNLNGYLLSASDDHTICLWDINAT---------PKEHRVIDAKNIFTGHTAV-------- 237
Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR---TGYCVQSFEGHQSDVNSVKFHPSG 190
            + D+      +S  G    + DD+ + IWD R   T     + + H ++VN + F+P  
Sbjct: 238 -VEDVAWHLLHESLFGS---VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 293
Query: 191 DAV-ATGSDDATCRLFDLRADK-EVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYT 245
           + + ATGS D T  L+DLR  K ++  ++  KD I      V +S     + A    D  
Sbjct: 294 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF----QVQWSPHNETILASSGTDRR 349
Query: 246 INVWD 250
           ++VWD
Sbjct: 350 LHVWD 354

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 32  SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCA 90
           S+  S   D K+ ++     +++S    TV  HT+ ++C  F P S+  + TGS D T A
Sbjct: 245 SLFGSVADDQKLMIWDTR-NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303
Query: 91  LWDVESSQL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
           LWD+ + +L L SF  H  E+  +  +P        S  +D+ +++WD+
Sbjct: 304 LWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDL 351

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLV 133
           PN +  +L+ S D T  LWD+ ++           E   +D     TG+T V        
Sbjct: 191 PNLNGYLLSASDDHTICLWDINAT---------PKEHRVIDAKNIFTGHTAV-------- 233
Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR---TGYCVQSFEGHQSDVNSVKFHPSG 190
            + D+      +S  G    + DD+ + IWD R   T     + + H ++VN + F+P  
Sbjct: 234 -VEDVAWHLLHESLFGS---VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289
Query: 191 DAV-ATGSDDATCRLFDLRADK-EVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYT 245
           + + ATGS D T  L+DLR  K ++  ++  KD I      V +S     + A    D  
Sbjct: 290 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF----QVQWSPHNETILASSGTDRR 345
Query: 246 INVWD 250
           ++VWD
Sbjct: 346 LHVWD 350

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 32  SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCA 90
           S+  S   D K+ ++     +++S    TV  HT+ ++C  F P S+  + TGS D T A
Sbjct: 247 SLFGSVADDQKLMIWDTR-NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 305
Query: 91  LWDVESSQL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
           LWD+ + +L L SF  H  E+  +  +P        S  +D+ +++WD+
Sbjct: 306 LWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDL 353

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLV 133
           PN +  +L+ S D T  LWD+ ++           E   +D     TG+T V        
Sbjct: 193 PNLNGYLLSASDDHTICLWDINAT---------PKEHRVIDAKNIFTGHTAV-------- 235
Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR---TGYCVQSFEGHQSDVNSVKFHPSG 190
            + D+      +S  G    + DD+ + IWD R   T     + + H ++VN + F+P  
Sbjct: 236 -VEDVAWHLLHESLFGS---VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 291
Query: 191 DAV-ATGSDDATCRLFDLRADK-EVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYT 245
           + + ATGS D T  L+DLR  K ++  ++  KD I      V +S     + A    D  
Sbjct: 292 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF----QVQWSPHNETILASSGTDRR 347
Query: 246 INVWD 250
           ++VWD
Sbjct: 348 LHVWD 352

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 32  SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCA 90
           S+  S   D K+ ++     + +S     V  HT+ ++C  F P S+  + TGS D T A
Sbjct: 243 SLFGSVADDQKLXIWDTR-SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 301
Query: 91  LWDVESSQL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138
           LWD+ + +L L +F  H  E+  +  +P        S  +D+ +N+WD+
Sbjct: 302 LWDLRNLKLKLHTFESHKDEIFQVHWSP-HNETILASSGTDRRLNVWDL 349

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 36/177 (20%)
Query: 105 GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM----RTGYCVQS---FEGH------- 150
           GH  E   L    + +G+  +S S D  V +WD+    + G  V +   F GH       
Sbjct: 177 GHQKEGYGLSWNSNLSGH-LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 235
Query: 151 --HNL-------ITDDKLVNIWDMRTGYCVQS---FEGHQSDVNSVKFHPSGDAV-ATGS 197
             H L       + DD+ + IWD R+    +     + H ++VN + F+P  + + ATGS
Sbjct: 236 AWHLLHESLFGSVADDQKLXIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 295
Query: 198 DDATCRLFDLRADK-EVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYTINVWD 250
            D T  L+DLR  K ++  ++  KD I      V +S     + A    D  +NVWD
Sbjct: 296 ADKTVALWDLRNLKLKLHTFESHKDEIF----QVHWSPHNETILASSGTDRRLNVWD 348

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 54  SSAKKKTVATHTSFISCCIF-PNSDQQILTGSGDCTCALWDVESSQL-LQSFHGHTGELM 111
           +S     V  HT+ ++C  F P S+  + TGS D T ALWD+ + +L L +F  H  E+ 
Sbjct: 264 TSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIF 323
Query: 112 DLDLAPSETGNTFVSGSSDKLVNIWDM 138
            +  +P        S  +D+ +N+WD+
Sbjct: 324 QVHWSP-HNETILASSGTDRRLNVWDL 349

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 36/177 (20%)
Query: 105 GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM----RTGYCVQS---FEGH------- 150
           GH  E   L    + +G+  +S S D  V +WD+    + G  V +   F GH       
Sbjct: 177 GHQKEGYGLSWNSNLSGH-LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 235
Query: 151 --HNL-------ITDDKLVNIWDMRTGYCVQS---FEGHQSDVNSVKFHPSGDAV-ATGS 197
             H L       + DD+ + IWD R+    +     + H ++VN + F+P  + + ATGS
Sbjct: 236 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 295
Query: 198 DDATCRLFDLRADK-EVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYTINVWD 250
            D T  L+DLR  K ++  ++  KD I      V +S     + A    D  +NVWD
Sbjct: 296 ADKTVALWDLRNLKLKLHTFESHKDEIF----QVHWSPHNETILASSGTDRRLNVWD 348

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/229 (19%), Positives = 91/229 (39%), Gaps = 35/229 (15%)
Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
           ++ +C   P G  +  GG  + ++++ +A       K +  ++  +  +  I P+S +  
Sbjct: 99  YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-PRIKAELTSSAPACYALAISPDS-KVC 156
Query: 81  LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT 140
            +   D   A+WD+ +  L++ F GHT     +D+  S  G    +G  D  V  WD+R 
Sbjct: 157 FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI--SNDGTKLWTGGLDNTVRSWDLRE 214
Query: 141 GYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA 200
           G  +Q  +    + +            GYC                 P+G+ +A G + +
Sbjct: 215 GRQLQQHDFTSQIFS-----------LGYC-----------------PTGEWLAVGMESS 246
Query: 201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249
              +  +    +   +  +S +    S+ F+  G+   +   D  +N W
Sbjct: 247 NVEVLHVNKPDKYQLHLHESCVL---SLKFAYCGKWFVSTGKDNLLNAW 292

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 48/109 (44%)
Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240
           + S K  P G  +  G + +T  ++DL A       +  S      ++  S   ++ F+ 
Sbjct: 100 IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 159
Query: 241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
            +D  I VWD      V    GH +  SC+ +S DGT   +G  D T+R
Sbjct: 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR 208

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 84  SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF----VSGSSDKLVNIWDMR 139
           S D + ++W   + + L +  GHTG +  +D+      + F    V+GS+D  + +WD+ 
Sbjct: 51  SKDSSASVWYSLNGERLGTLDGHTGTIWSIDV------DCFTKYCVTGSADYSIKLWDVS 104
Query: 140 TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD 199
            G CV +++           V +  +    C   F    + +++V  +P    +     D
Sbjct: 105 NGQCVATWK---------SPVPVKRVEFSPCGNYF---LAILDNVMKNPGSINIYEIERD 152
Query: 200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD-SLKCCRVN 258
           +        +++ +        L  AT   +S  G+ + AG+ D  I+ +D S     V+
Sbjct: 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVD 212
Query: 259 HLMGHENRVSCLQVSPDGTAFSSGSWDT 286
            +  HE  +S +Q SPD T F + S DT
Sbjct: 213 SIDLHEKSISDMQFSPDLTYFITSSRDT 240

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 34/169 (20%)
Query: 72  IFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG--------------HTGELMDLDLAP 117
           I P   + +L+G  D    L+D+E+S   QS++               H   +  +   P
Sbjct: 51  IEPVEGRYMLSGGSDGVIVLYDLENSSR-QSYYTCKAVCSIGRDHPDVHRYSVETVQWYP 109
Query: 118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFE------GHH-----------NLITDDKLV 160
            +TG  F S S DK + +WD  T      F        HH            + T    V
Sbjct: 110 HDTG-MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKV 168
Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLR 208
            + D+++G C    +GH+ ++ +V + P  D + AT S D+  +L+D+R
Sbjct: 169 QLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 58/241 (24%)
Query: 30  SGSVVASGGLDNKVTVYAIALED-------DSSAKKKTVAT-----HTSFISCCIFPNSD 77
           S  ++A+G  D K+ + ++  +D       D +A KK + +     HTS ++        
Sbjct: 23  SQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAA------- 75
Query: 78  QQILTGSGDCTCALWDVESS-------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD 130
                GS D T ++W  E S        LL    GH  E+  +  A S  G    + S D
Sbjct: 76  -----GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV--AWSNDGYYLATCSRD 128
Query: 131 KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG 190
           K V IW+  T    + +E                     C+   + H  DV  V +HPS 
Sbjct: 129 KSVWIWE--TDESGEEYE---------------------CISVLQEHSQDVKHVIWHPSE 165
Query: 191 DAVATGSDDATCRLF-DLRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINV 248
             +A+ S D T R++ D   D E VA          ++  D +     L +G +D T+ V
Sbjct: 166 ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV 225
Query: 249 W 249
           W
Sbjct: 226 W 226

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 15/260 (5%)
Query: 49  ALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG 108
            L+ + + +++    H S I+   F  S + +++ S D    +W V+     ++  GH  
Sbjct: 120 VLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 179
Query: 109 ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG 168
            +   D+A  + G   +S S D  + +W+  TG  + +F    N       VN   +  G
Sbjct: 180 TVT--DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN---PHDGVNSIALFVG 234
Query: 169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE-VACYKKDSILFGATS 227
              Q  E   S  N+++F   G  V  G       + ++ + ++ +    K +    + +
Sbjct: 235 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLT 294
Query: 228 VDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           VD + +   ++AGY +  +  WD  S +C     L+     ++ +  +  G  F S  +D
Sbjct: 295 VDGN-NANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAA-GALFVSSGFD 352
Query: 286 TTLR-----DEESKNRYVQY 300
           T+++     D ES+   +++
Sbjct: 353 TSIKLDIISDPESERPAIEF 372

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 15/260 (5%)
Query: 49  ALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG 108
            L+ + + +++    H S I+   F  S + +++ S D    +W V+     ++  GH  
Sbjct: 123 VLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182
Query: 109 ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG 168
            +   D+A  + G   +S S D  + +W+  TG  + +F    N       VN   +  G
Sbjct: 183 TVT--DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN---PHDGVNSIALFVG 237
Query: 169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE-VACYKKDSILFGATS 227
              Q  E   S  N+++F   G  V  G       + ++ + ++ +    K +    + +
Sbjct: 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLT 297
Query: 228 VDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           VD + +   ++AGY +  +  WD  S +C     L+     ++ +  +  G  F S  +D
Sbjct: 298 VDGN-NANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAA-GALFVSSGFD 355
Query: 286 TTLR-----DEESKNRYVQY 300
           T+++     D ES+   +++
Sbjct: 356 TSIKLDIISDPESERPAIEF 375

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 28/202 (13%)
Query: 21  WVMACAYAPSGSVVASGGLDNKVTVY-------AIALEDDSSAKKKTVATHTSFISCCIF 73
           +V +  Y P GS+ AS G D  + +Y           EDDS    K VA   S       
Sbjct: 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS---LKNVAHSGSVFGLTWS 248
Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLV 133
           P+   +I + S D T  +W+V + ++ ++    T  + D  L    T    VS S++  +
Sbjct: 249 PDG-TKIASASADKTIKIWNVATLKVEKTIPVGT-RIEDQQLGIIWTKQALVSISANGFI 306
Query: 134 NIWDMRTGYCVQSFEGHHNLIT------DDKL---------VNIWDMRTGYCVQSF-EGH 177
           N  +   G   Q   GH+  IT      D K          +N WD+ TG   + F + H
Sbjct: 307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH 366
Query: 178 QSDVNSVKFHPSGDAVATGSDD 199
            + +  +K    GD      DD
Sbjct: 367 ATMITGIKTTSKGDLFTVSWDD 388

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 40/190 (21%)
Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQ-------SFHGHTGELMDLDLAPSETGNTFVS 126
           P++D  I +GS DCT  +W++    L+        +  GHT  +  +   P+   N  +S
Sbjct: 91  PHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ-NVLLS 149
Query: 127 GSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF 186
              D ++ +WD+ TG  V +                            + H   + SV +
Sbjct: 150 AGXDNVILVWDVGTGAAVLTL-------------------------GPDVHPDTIYSVDW 184
Query: 187 HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD--FSVSGRLLFAGY--- 241
              G  + T   D   R+ + R    VA  +KD    G   V   F   G++L  G+   
Sbjct: 185 SRDGALICTSCRDKRVRVIEPRKGTVVA--EKDRPHEGTRPVHAVFVSEGKILTTGFSRM 242
Query: 242 NDYTINVWDS 251
           ++  + +WD+
Sbjct: 243 SERQVALWDT 252

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 40/190 (21%)
Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQ-------SFHGHTGELMDLDLAPSETGNTFVS 126
           P++D  I +GS DCT  +W++    L+        +  GHT  +  +   P+   N  +S
Sbjct: 91  PHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ-NVLLS 149
Query: 127 GSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF 186
              D ++ +WD+ TG  V +                            + H   + SV +
Sbjct: 150 AGCDNVILVWDVGTGAAVLTL-------------------------GPDVHPDTIYSVDW 184
Query: 187 HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD--FSVSGRLLFAGY--- 241
              G  + T   D   R+ + R    VA  +KD    G   V   F   G++L  G+   
Sbjct: 185 SRDGALICTSCRDKRVRVIEPRKGTVVA--EKDRPHEGTRPVHAVFVSEGKILTTGFSRM 242
Query: 242 NDYTINVWDS 251
           ++  + +WD+
Sbjct: 243 SERQVALWDT 252

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 43  VTVYAIALE--------DDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV 94
           + V A+ALE        D  S         +++++   + +    +  G G+    ++DV
Sbjct: 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163
Query: 95  ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-YCVQSFEGHHNL 153
           ES   L++  GH   +  L    S   +   SGS    ++  D+R   + + + +GH + 
Sbjct: 164 ESQTKLRTMAGHQARVGCL----SWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSE 219
Query: 154 I---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGS 197
           +                +D +V IWD R+     +   H + V +V + P   + +ATG 
Sbjct: 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGG 279
Query: 198 D--DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA--GYNDYTINVWD--S 251
              D     ++      V      S +   TS+ +S   + + +  G+ D  +++W   S
Sbjct: 280 GTMDKQIHFWNAATGARVNTVDAGSQV---TSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336
Query: 252 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
               +   +  H+ RV    +SPDG   S+ + D  L+
Sbjct: 337 SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLK 374

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACY- 216
           ++ I +  T  C++ + GH + +N +KFHP   + + + S D   RL++++ D  VA + 
Sbjct: 132 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG 191
Query: 217 ----KKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249
                +D +L    S D+ + G  + +   D+++ +W
Sbjct: 192 GVEGHRDEVL----SADYDLLGEKIMSCGMDHSLKLW 224

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACY- 216
           ++ I +  T  C++ + GH + +N +KFHP   + + + S D   RL++++ D  VA + 
Sbjct: 91  IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG 150
Query: 217 ----KKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249
                +D +L    S D+ + G  + +   D+++ +W
Sbjct: 151 GVEGHRDEVL----SADYDLLGEKIMSCGMDHSLKLW 183

>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACY- 216
           ++ I +  T  C++ + GH + +N +KFHP   + + + S D   RL++++ D  VA + 
Sbjct: 95  IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG 154
Query: 217 ----KKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249
                +D +L    S D+ + G  + +   D+++ +W
Sbjct: 155 GVEGHRDEVL----SADYDLLGEKIMSCGMDHSLKLW 187

>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACY- 216
           ++ I +  T  C++ + GH + +N +KFHP   + + + S D   RL++++ D  VA + 
Sbjct: 95  IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG 154
Query: 217 ----KKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249
                +D +L    S D+ + G  + +   D+++ +W
Sbjct: 155 GVEGHRDEVL----SADYDLLGEKIMSCGMDHSLKLW 187

>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACY- 216
           ++ I +  T  C++ + GH + +N +KFHP   + + + S D   RL++++ D  VA + 
Sbjct: 96  IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG 155
Query: 217 ----KKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249
                +D +L    S D+ + G  + +   D+++ +W
Sbjct: 156 GVEGHRDEVL----SADYDLLGEKIMSCGMDHSLKLW 188

>pdb|4GQB|B Chain B, Crystal Structure Of The Human Prmt5:mep50 Complex Length = 344

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 20/162 (12%)
Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           H   +S     +S  Q ++GS D    +WD+    +L S+  H  ++  +  +P +  + 
Sbjct: 126 HDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK-DSV 184
Query: 124 FVSGSSDKLVNIWDMR------------TGYCVQSFEGHHN------LITDDKLVNIWDM 165
           F+S S D  + +WD R             GY   S   H           ++  V++ D 
Sbjct: 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244
Query: 166 RTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFD 206
           ++  CV S   H   V  + F P S   +A+ S+D +  + D
Sbjct: 245 KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLD 286

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.98
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.98
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.98
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.97
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.97
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.97
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.96
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.96
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.94
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.94
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.93
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.93
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.92
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.91
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.91
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.9
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.9
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.89
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.89
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.89
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.89
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.89
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.88
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.88
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.87
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.87
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.87
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.86
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.86
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.85
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.85
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.85
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.83
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.83
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.82
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.79
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.79
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.79
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.79
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.79
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.78
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.77
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.76
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.76
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.72
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.72
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.71
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.71
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.71
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.69
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.68
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.67
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.66
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.66
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.64
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.63
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.63
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.61
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.61
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.6
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.59
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.59
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.59
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.59
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.57
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.55
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.55
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.54
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.54
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.52
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.51
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.51
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.48
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.46
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.46
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.46
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.43
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.43
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.43
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.42
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.42
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.41
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.4
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.39
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.39
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.38
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.36
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.32
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.31
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.31
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.29
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.25
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.21
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.2
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.2
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.2
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.19
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.16
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.15
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.13
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.12
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.1
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.08
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.06
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.03
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.02
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.99
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.95
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.88
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.88
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.87
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.82
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.8
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.79
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.79
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.79
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.75
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.74
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.69
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.64
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.64
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.6
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.56
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.52
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.48
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.48
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.45
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.44
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.42
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.38
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.37
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.34
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.3
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.25
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.23
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.16
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.15
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.08
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.08
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.04
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.04
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.02
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.02
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.0
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.97
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.94
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.87
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.85
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.83
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.65
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.51
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.5
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.46
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.41
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.37
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.34
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.34
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.31
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.26
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.23
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.23
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.22
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.19
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.11
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.02
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.91
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.9
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.84
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.8
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.66
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.6
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.6
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.59
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.56
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.54
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.36
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.35
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.27
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.26
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.25
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.19
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.06
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.06
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	95.99
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.93
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.87
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.8
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	95.78
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	95.73
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	95.53
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.51
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.37
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	94.98
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	94.84
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.74
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	94.71
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.7
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	94.65
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	94.6
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	94.22
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	93.78
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	93.73
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	93.56
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	93.05
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.66
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	92.63
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.5
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	92.29
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	92.22
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	92.17
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	91.8
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.64
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.44
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	91.09
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	90.31
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	89.75
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	87.78
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	87.44
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	86.65
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	82.88

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=3.6e-46  Score=326.02  Aligned_cols=273  Identities=38%  Similarity=0.715  Sum_probs=241.6

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..+..|...|.+++|+|++++|++|+.||.|++||+..    ......+..|...|.++.|+++++++++|+.|+.|++|
T Consensus        49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw  124 (340)
T 1got_B           49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT----TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY  124 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT----CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred             eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC----CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            44567889999999999999999999999999999743    22344567889999999999999999999999999999


Q ss_pred             ECCCc----ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc--------------
Q psy14961         93 DVESS----QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI--------------  154 (320)
Q Consensus        93 d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~--------------  154 (320)
                      ++.+.    .....+.+|.+.+.++.+.+.   ..+++++.|+.|++||+++++.+..+.+|...+              
T Consensus       125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  201 (340)
T 1got_B          125 NLKTREGNVRVSRELAGHTGYLSCCRFLDD---NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS  201 (340)
T ss_dssp             ETTTCSBSCEEEEEEECCSSCEEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             ECccCCCcceeEEEecCCCccEEEEEECCC---CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence            99765    345667889999999888653   469999999999999999999888887765432              


Q ss_pred             -cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        155 -TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       155 -~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                       +.|+.|++||++++.+...+.+|...|.+++|+|++++|++|+.||+|++||++.++.+..+........+.+++|+|+
T Consensus       202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~  281 (340)
T 1got_B          202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS  281 (340)
T ss_dssp             EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred             EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence             3589999999999999999999999999999999999999999999999999999887766655444446789999999


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      |++|++|+.||.|++||..+...+..+.+|.++|++++|+|||++|+|||.|++|++|+
T Consensus       282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            99999999999999999999889999999999999999999999999999999999996

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=3.6e-46  Score=334.16  Aligned_cols=272  Identities=25%  Similarity=0.463  Sum_probs=244.3

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..|...|++++|+|++++|++|+.||.|++||+...    .....+.+|...|.++.|++++++|++|+.|++|++||
T Consensus       103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~----~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd  178 (410)
T 1vyh_C          103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD  178 (410)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC----CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred             eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence            35568889999999999999999999999999998532    33456788999999999999999999999999999999


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCC
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDK  158 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~  158 (320)
                      +.+++++..+.+|...|.++++.|  +++.|++|+.|+.|++||++++.++..+.+|...+               +.|+
T Consensus       179 ~~~~~~~~~~~~h~~~V~~v~~~p--~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~  256 (410)
T 1vyh_C          179 FQGFECIRTMHGHDHNVSSVSIMP--NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ  256 (410)
T ss_dssp             TTSSCEEECCCCCSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCCceeEEEcCCCCCEEEEEEeC--CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence            999999999999999999998865  57899999999999999999999988887775432               3589


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCC--------------------CCEEEEeeCCCeEEEEECCCCeeEeEEec
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--------------------GDAVATGSDDATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--------------------g~~l~s~s~dg~i~iwd~~~~~~~~~~~~  218 (320)
                      .|++||++++.+...+.+|...|.+++|+|+                    |.+|++|+.|++|++||+++++.+..+..
T Consensus       257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~  336 (410)
T 1vyh_C          257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG  336 (410)
T ss_dssp             CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence            9999999999999999999999999999996                    67899999999999999999988776655


Q ss_pred             CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       219 ~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +..  .+.+++|+|+|++|++|+.||+|++||..+...+..+.+|...|++++|+|++++|+|||.|++||+|+.
T Consensus       337 h~~--~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          337 HDN--WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             CSS--CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred             CCC--cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence            432  3578999999999999999999999999988888899999999999999999999999999999999985

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=5.5e-46  Score=326.66  Aligned_cols=265  Identities=71%  Similarity=1.163  Sum_probs=236.6

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC--cccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+|||..+.+....+..|..+|.+++|+|+|.+|++|+.|+.+++|++.....  .......+..|...|.++.|++++.
T Consensus        88 v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  167 (354)
T 2pbi_B           88 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM  167 (354)
T ss_dssp             EEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS
T ss_pred             EEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC
Confidence            57999999998888888999999999999999999999999999999864321  1233445678999999999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      .|++++.|++|++||+++++++..+.+|...|.+++++|+++++.|++|+.||.|++||+++++++.             
T Consensus       168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~-------------  234 (354)
T 2pbi_B          168 QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ-------------  234 (354)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE-------------
T ss_pred             EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE-------------
Confidence            9999999999999999999999999999999999999988788999999999999999988765443             


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF  238 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  238 (320)
                                    .+.+|...|.+++|+|++++|++|+.|++|++||++.++.+..+........+.+++|+|++.+|+
T Consensus       235 --------------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~  300 (354)
T 2pbi_B          235 --------------AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF  300 (354)
T ss_dssp             --------------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred             --------------EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEE
Confidence                          345688899999999999999999999999999999888776665554445678899999999999


Q ss_pred             EEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       239 ~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +|+.|++|++||+.++..+..+.+|.+.|++++|+|||++|+|||.|++|++|+
T Consensus       301 ~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          301 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            999999999999988888888999999999999999999999999999999996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.2e-45  Score=316.79  Aligned_cols=272  Identities=19%  Similarity=0.311  Sum_probs=237.9

Q ss_pred             EeCccceEEEEEcCC----CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         16 TMPATWVMACAYAPS----GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~----~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      ..|...|++++|+|+    +.+|++|+.|+.|++|++...  .......+.+|...|.++.+++++..+++++.|++|++
T Consensus        29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~--~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l  106 (321)
T 3ow8_A           29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE--RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL  106 (321)
T ss_dssp             TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT--EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred             ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC--CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence            468899999999974    679999999999999998532  22233457789999999999999999999999999999


Q ss_pred             EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cC
Q psy14961         92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD  156 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~  156 (320)
                      ||+.+++.+..+..+...+.+++++  |+++.|++++.|+.|++||++++.....+..+...+               ..
T Consensus       107 Wd~~~~~~~~~~~~~~~~~~~~~~s--pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~  184 (321)
T 3ow8_A          107 WDLENGKQIKSIDAGPVDAWTLAFS--PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI  184 (321)
T ss_dssp             EETTTTEEEEEEECCTTCCCCEEEC--TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred             EECCCCCEEEEEeCCCccEEEEEEC--CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence            9999999988888888888888775  568999999999999999999988776665543321               35


Q ss_pred             CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                      |+.|++||+++++++..+.+|..+|.+++|+|++++|++|+.|+.|++||++.++....+..+..  .+.+++|+|++++
T Consensus       185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~sp~~~~  262 (321)
T 3ow8_A          185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS--WVLNVAFCPDDTH  262 (321)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSE
T ss_pred             CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC--ceEEEEECCCCCE
Confidence            88999999999999999999999999999999999999999999999999998877666554432  3678999999999


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      |++|+.|++|++||+.++..+.++.+|.+.|.+++|+|++++|++++.|++|++||.
T Consensus       263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            999999999999999999999999999999999999999999999999999999995

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.4e-46  Score=330.31  Aligned_cols=287  Identities=33%  Similarity=0.610  Sum_probs=242.0

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT   82 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s   82 (320)
                      .|+..+......+..|...|++++|+|++++|++|+.|++|++||+..    ......+..|...|.++.|+++++++++
T Consensus        50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~----~~~~~~~~~h~~~v~~~~~s~~g~~las  125 (380)
T 3iz6_a           50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT----SQKTHAIKLHCPWVMECAFAPNGQSVAC  125 (380)
T ss_dssp             CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT----TEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred             ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CccceEEecCCCCEEEEEECCCCCEEEE
Confidence            466666666667788999999999999999999999999999999742    2334567789999999999999999999


Q ss_pred             EeCCCeEEEEECCCcc-------eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-----ccC
Q psy14961         83 GSGDCTCALWDVESSQ-------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-----EGH  150 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-----~~~  150 (320)
                      |+.|+.+++||+.+..       ....+.+|.+.+.++.+.|.. +..|++|+.|+.|++||+++++.+..+     .+|
T Consensus       126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h  204 (380)
T 3iz6_a          126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ-ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH  204 (380)
T ss_dssp             CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS-SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred             eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC-CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence            9999999999986532       345577899999888876642 457999999999999999999887665     233


Q ss_pred             Ccc----------------ccCCCeEEEEECc-CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961        151 HNL----------------ITDDKLVNIWDMR-TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV  213 (320)
Q Consensus       151 ~~~----------------~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~  213 (320)
                      ...                .+.|+.|++||++ ...++..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+
T Consensus       205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~  284 (380)
T 3iz6_a          205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL  284 (380)
T ss_dssp             CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred             ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence            221                1358999999998 45788889999999999999999999999999999999999998877


Q ss_pred             eEEecCcc-----eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe----ecCCCceeEEEECcCCCeEEEecC
Q psy14961        214 ACYKKDSI-----LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL----MGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       214 ~~~~~~~~-----~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~----~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                      ..+.....     ...+.+++|+|+|.+|++|+.||.|++||......+..+    .+|.+.|++++|+|||++|+|||.
T Consensus       285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~  364 (380)
T 3iz6_a          285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW  364 (380)
T ss_dssp             EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred             EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence            66543321     123578999999999999999999999999887777666    689999999999999999999999


Q ss_pred             CCceEeeecc
Q psy14961        285 DTTLRDEESK  294 (320)
Q Consensus       285 D~~ir~~~~~  294 (320)
                      |++|++|+..
T Consensus       365 D~~i~iW~~~  374 (380)
T 3iz6_a          365 DKNLKIWAFS  374 (380)
T ss_dssp             TSCEEEEECC
T ss_pred             CCCEEEEecC
Confidence            9999999964

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7.6e-44  Score=308.58  Aligned_cols=279  Identities=23%  Similarity=0.407  Sum_probs=235.9

Q ss_pred             eeEEEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCC
Q psy14961         10 TKEHSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDC   87 (320)
Q Consensus        10 ~~~~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg   87 (320)
                      .....+..|...|.+++|+|++ ++|++|+.|++|++|++...+.. ......+.+|...|.++.|+++++++++|+.|+
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~   87 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK   87 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence            3445667899999999999965 89999999999999998643322 223456789999999999999999999999999


Q ss_pred             eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------------
Q psy14961         88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--------------  153 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--------------  153 (320)
                      +|++||+.+++.+..+.+|...|.++++.+  ++..|++|+.|+.|++||++. .++..+.+|...              
T Consensus        88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~  164 (319)
T 3frx_A           88 TLRLWDVATGETYQRFVGHKSDVMSVDIDK--KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADD  164 (319)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECT--TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC-----
T ss_pred             EEEEEECCCCCeeEEEccCCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCC
Confidence            999999999999999999999999988754  688999999999999999974 455555444321              


Q ss_pred             -------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        154 -------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       154 -------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                             .+.|+.|++||+++.+....+.+|...|.+++|+|+|++|++++.||+|++||+.+++.+..+....   .+.
T Consensus       165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~v~  241 (319)
T 3frx_A          165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD---EVF  241 (319)
T ss_dssp             -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS---CEE
T ss_pred             CccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC---cEE
Confidence                   1368899999999999999999999999999999999999999999999999999988777665543   357


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee--------cCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM--------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~--------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +++|+|++.+|++++.+ .+++|+......+..+.        .|...+.+++|+|||++|++|+.|++||+|+..+
T Consensus       242 ~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          242 SLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             EEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred             EEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence            89999999999998855 59999987766555443        3466899999999999999999999999999753

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=3.2e-43  Score=309.36  Aligned_cols=274  Identities=18%  Similarity=0.281  Sum_probs=216.5

Q ss_pred             eCccceEEEEEcCCCCEEEEecC------CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         17 MPATWVMACAYAPSGSVVASGGL------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      .|...|.+++|+|||++|++|+.      |+.+++|+................|...|.++.|++++ .+++++.||+|+
T Consensus        40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~  118 (357)
T 4g56_B           40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGAVE  118 (357)
T ss_dssp             CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSCEE
T ss_pred             cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCEEE
Confidence            57889999999999999999997      67888887643222222333445788899999999876 577788999999


Q ss_pred             EEECCCcceee----ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------------
Q psy14961         91 LWDVESSQLLQ----SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------------  154 (320)
Q Consensus        91 iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------------  154 (320)
                      +||+.+++...    ...+|...|.+++++  +++++|++|+.|+.|++||+++++++..+.+|...+            
T Consensus       119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s--pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~  196 (357)
T 4g56_B          119 LWEILEKESLLVNKFAKYEHDDIVKTLSVF--SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI  196 (357)
T ss_dssp             EC--------CCCCEEECCCSSCEEEEEEC--SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred             EeeccccceeEEEeeccCCCCCCEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence            99998876432    234788999998885  468999999999999999999999888877665432            


Q ss_pred             ----cCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEE
Q psy14961        155 ----TDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS  227 (320)
Q Consensus       155 ----~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  227 (320)
                          ..|+.|++||++++++...+  ..|...+.+++|+|++ .+|++|+.|+.|++||+++++.+..+..+..  .+.+
T Consensus       197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~--~v~~  274 (357)
T 4g56_B          197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ--NITG  274 (357)
T ss_dssp             EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS--CEEE
T ss_pred             eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce--eEEE
Confidence                35889999999998876654  4567789999999974 6889999999999999998877666554432  4678


Q ss_pred             EEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecchH
Q psy14961        228 VDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       228 ~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ++|+|++ ++|++|+.|++|++||+.+++.+. ..+|.+.|++|+|+| |+++|+|||.|++|++|+....
T Consensus       275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             EEECSSSSCCEEEEETTSCEEEECTTSCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            9999987 589999999999999998877665 468999999999999 8999999999999999996443

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.6e-42  Score=296.03  Aligned_cols=272  Identities=19%  Similarity=0.340  Sum_probs=229.4

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..+..|...|.+++|+|++++|++|+.||.|++||+..    ......+..|...|.++.|++++++|++|+.|++|++|
T Consensus         7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw   82 (304)
T 2ynn_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF   82 (304)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred             EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC----CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence            34567889999999999999999999999999999852    23345677899999999999999999999999999999


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCccc----------------c
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHNLI----------------T  155 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~~~----------------~  155 (320)
                      |+++++.+..+.+|...|.+++++|  ++.+|++|+.|+.|++||++++. ....+.+|...+                +
T Consensus        83 d~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs  160 (304)
T 2ynn_A           83 NYNTGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC  160 (304)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECS--SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred             ECCCCcEEEEEeCCCCcEEEEEEcC--CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence            9999999999999999999998865  57899999999999999998774 334455544321                3


Q ss_pred             CCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec
Q psy14961        156 DDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV  232 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~  232 (320)
                      .|+.|++||+++..+...+. +|...+..++|+|  ++.+|++|+.|++|++||+++++.+..+..+..  .+..++|+|
T Consensus       161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~--~v~~~~~~p  238 (304)
T 2ynn_A          161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHP  238 (304)
T ss_dssp             TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEECS
T ss_pred             CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC--CEEEEEECC
Confidence            58999999998877665554 5668899999987  678999999999999999999988777665543  357889999


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC--eEEEecCCCceEeeec
Q psy14961        233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT--AFSSGSWDTTLRDEES  293 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~--~l~s~s~D~~ir~~~~  293 (320)
                      ++++|++|+.||+|++||..+.+.+.++..|...+++++|+|++.  ++|+|+.|+ +.+|+.
T Consensus       239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~  300 (304)
T 2ynn_A          239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSL  300 (304)
T ss_dssp             SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred             CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence            999999999999999999999999999999999999999999875  477776655 555554

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=8.3e-42  Score=294.44  Aligned_cols=277  Identities=25%  Similarity=0.445  Sum_probs=236.3

Q ss_pred             EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         12 EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        12 ~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      ...+..|...|.+++|+|++++|++|+.||.|++|++..    ......+..|...|.++.|++++++|++++.|+.|++
T Consensus        16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v   91 (312)
T 4ery_A           16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI   91 (312)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC----cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence            344567888999999999999999999999999999742    2234456789999999999999999999999999999


Q ss_pred             EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cC
Q psy14961         92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD  156 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~  156 (320)
                      ||+++++.+..+.+|...|.++++.|  ++++|++++.|+.|++||+++++++..+..|...+               +.
T Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  169 (312)
T 4ery_A           92 WDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY  169 (312)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEECS--SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EECCCCcEEEEEcCCCCCEEEEEEcC--CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence            99999999999999999999888855  67899999999999999999998888776654332               35


Q ss_pred             CCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE-ecCC
Q psy14961        157 DKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF-SVSG  234 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-s~~~  234 (320)
                      |+.|++||+++++++..+. .+...+.+++|+|++++|++++.|+.|++||+++++.+..+..+..........+ .+++
T Consensus       170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (312)
T 4ery_A          170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG  249 (312)
T ss_dssp             TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred             CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence            8899999999988777654 4667899999999999999999999999999999887776654432211122334 4678


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEec--CCCceEeeecc
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS--WDTTLRDEESK  294 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s--~D~~ir~~~~~  294 (320)
                      .+|++|+.||.|++||+.+...+..+.+|.+.|.+++|+|++++|++++  .|++|++|+..
T Consensus       250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            8999999999999999999999999999999999999999999999997  69999999863

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.9e-42  Score=301.55  Aligned_cols=271  Identities=18%  Similarity=0.254  Sum_probs=216.6

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEeccc-------CCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALE-------DDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      ++..|.+++|+|||++|++++ |+++++||....       ............|...|.++.|+++ +.+++|+.||+|+
T Consensus        29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~v~  106 (344)
T 4gqb_B           29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGAVE  106 (344)
T ss_dssp             CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSEEE
T ss_pred             ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCEEE
Confidence            456799999999999999887 677777763211       0111111222346678999999986 5789999999999


Q ss_pred             EEECCCcceeee----cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------------
Q psy14961         91 LWDVESSQLLQS----FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------------  154 (320)
Q Consensus        91 iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------------  154 (320)
                      +||+++++.+..    +.+|.+.|.+++|+  ++|++|++|+.|+.|++||+++++++..+.+|...+            
T Consensus       107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s--pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~  184 (344)
T 4gqb_B          107 LWELDENETLIVSKFCKYEHDDIVSTVSVL--SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV  184 (344)
T ss_dssp             EEEECTTSSCEEEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred             EEeccCCCceeEeeccccCCCCCEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence            999998865433    34799999999885  468999999999999999999999998887775432            


Q ss_pred             ----cCCCeEEEEECcCCeeeeeec--CCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEE
Q psy14961        155 ----TDDKLVNIWDMRTGYCVQSFE--GHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS  227 (320)
Q Consensus       155 ----~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  227 (320)
                          +.|+.|++||++++++...+.  .|...+.+++|+|+ +++|++|+.||+|++||+++++.+..+..+..  .+.+
T Consensus       185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~--~v~~  262 (344)
T 4gqb_B          185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ--CVTG  262 (344)
T ss_dssp             EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS--CEEE
T ss_pred             eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC--CEEE
Confidence                358999999999998887764  45567999999995 56889999999999999999887776665443  4678


Q ss_pred             EEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecch
Q psy14961        228 VDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       228 ~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~~  295 (320)
                      ++|+|++ ++|++|+.|++|++||...++.+ .+.+|.+.|++++|+|+++ +|+|||.|++|++|+...
T Consensus       263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~  331 (344)
T 4gqb_B          263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT  331 (344)
T ss_dssp             EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred             EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence            9999998 58999999999999999887654 5789999999999999886 578999999999999743

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=7.6e-42  Score=298.88  Aligned_cols=277  Identities=18%  Similarity=0.333  Sum_probs=222.1

Q ss_pred             EEEEEeCccceEEEEE-----cC-CCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEecCCCCEEEE
Q psy14961         12 EHSVTMPATWVMACAY-----AP-SGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIFPNSDQQILT   82 (320)
Q Consensus        12 ~~~~~~~~~~V~~~~~-----~~-~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s   82 (320)
                      ...+..|...|++++|     ++ ++++|++|+.|++|++|++...+.   .......+.+|...|.++.|++++.++++
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s   93 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS   93 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred             eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence            3456679999999999     76 999999999999999999864321   11234467789999999999999999999


Q ss_pred             EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE--------------Eec
Q psy14961         83 GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ--------------SFE  148 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~--------------~~~  148 (320)
                      |+.|++|++||+.+++.+..+.+|...|.+++|+|  +++.|++++.|+.|++||+.......              .+.
T Consensus        94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~  171 (343)
T 2xzm_R           94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP--DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS  171 (343)
T ss_dssp             EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS--STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred             EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC--CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence            99999999999999999999999999999998855  68899999999999999987432211              111


Q ss_pred             cCC-------------ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-eeEe
Q psy14961        149 GHH-------------NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-KEVA  214 (320)
Q Consensus       149 ~~~-------------~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-~~~~  214 (320)
                      +..             ...+.|+.|++|| ........+.+|...|.+++|+|+|++|++|+.||.|++||+... ....
T Consensus       172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~  250 (343)
T 2xzm_R          172 PIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR  250 (343)
T ss_dssp             CCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred             cccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence            111             1124689999999 456677788999999999999999999999999999999999533 3333


Q ss_pred             EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE--Eee-----------cCCCceeEEEECcCCCeEEE
Q psy14961        215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN--HLM-----------GHENRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~--~~~-----------~h~~~i~~i~~s~~~~~l~s  281 (320)
                      .+....   .+.+++|+|++.++++|. |+.|++||+.+.....  .+.           +|...|.+++|+|+|++|++
T Consensus       251 ~~~~~~---~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s  326 (343)
T 2xzm_R          251 EFDAGS---TINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA  326 (343)
T ss_dssp             EEECSS---CEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred             eecCCC---cEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence            332221   367899999999887665 7789999987654322  332           68889999999999999999


Q ss_pred             ecCCCceEeeecch
Q psy14961        282 GSWDTTLRDEESKN  295 (320)
Q Consensus       282 ~s~D~~ir~~~~~~  295 (320)
                      |+.|++||+|+.++
T Consensus       327 g~~Dg~v~~w~~~~  340 (343)
T 2xzm_R          327 GFTDGVIRTFSFET  340 (343)
T ss_dssp             EETTSEEEEEEEEE
T ss_pred             ecCCceEEEEEEEc
Confidence            99999999999643

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=4.4e-42  Score=322.63  Aligned_cols=286  Identities=20%  Similarity=0.302  Sum_probs=227.1

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-------cccccCeEEEEe
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-------ATHTSFISCCIF   73 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~   73 (320)
                      |++||..+.+....+..|...|.+++|+|+|++|++|+.|+.|++||+....    ....+       .+|...|.++.|
T Consensus       172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~  247 (611)
T 1nr0_A          172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTW  247 (611)
T ss_dssp             EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEE
T ss_pred             EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc----EeeeeccccccccccCCCEEEEEE
Confidence            4799999888887788899999999999999999999999999999974321    11122       279999999999


Q ss_pred             cCCCCEEEEEeCCCeEEEEECCCcceee-------------------------------------------ecccCccce
Q psy14961         74 PNSDQQILTGSGDCTCALWDVESSQLLQ-------------------------------------------SFHGHTGEL  110 (320)
Q Consensus        74 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~-------------------------------------------~~~~~~~~v  110 (320)
                      ++++++|++++.|++|++||+.+++++.                                           .+.+|...|
T Consensus       248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v  327 (611)
T 1nr0_A          248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI  327 (611)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE
Confidence            9999999999999999999998765433                                           234688888


Q ss_pred             eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-ccCCcc--------------ccCCCeEEEEECcCCee-----
Q psy14961        111 MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EGHHNL--------------ITDDKLVNIWDMRTGYC-----  170 (320)
Q Consensus       111 ~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~~~~~~--------------~~~d~~i~iwd~~~~~~-----  170 (320)
                      .+++++  |+|++|++++.|+.|++||+.++.+...+ .+|...              ...|+.+++|+...+.+     
T Consensus       328 ~~l~~s--pdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~  405 (611)
T 1nr0_A          328 TALSSS--ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKA  405 (611)
T ss_dssp             EEEEEC--TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSC
T ss_pred             EEEEEe--CCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccce
Confidence            888775  57899999999999999999988766544 222221              23577888888654321     


Q ss_pred             ------------------------------------eeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961        171 ------------------------------------VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA  214 (320)
Q Consensus       171 ------------------------------------~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~  214 (320)
                                                          +..+ .|...+.+++|+|+|++|++|+.|++|++||+..++...
T Consensus       406 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~  484 (611)
T 1nr0_A          406 VANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE  484 (611)
T ss_dssp             CEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEE
T ss_pred             eeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceee
Confidence                                                1111 255678999999999999999999999999998764321


Q ss_pred             EE-ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEE--eecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        215 CY-KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNH--LMGHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       215 ~~-~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~--~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      .. ..+  ...+.+++|+|+|++|++++.|++|++||..+ .+....  +.+|...|++++|+|||++|||||.|++||+
T Consensus       485 ~~~~~h--~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~l  562 (611)
T 1nr0_A          485 VKTIVH--PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV  562 (611)
T ss_dssp             EEEEEC--SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             eeccCC--CCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEE
Confidence            11 111  12468899999999999999999999999876 544443  2349999999999999999999999999999


Q ss_pred             eecch
Q psy14961        291 EESKN  295 (320)
Q Consensus       291 ~~~~~  295 (320)
                      |+...
T Consensus       563 W~~~~  567 (611)
T 1nr0_A          563 WNMNK  567 (611)
T ss_dssp             EETTC
T ss_pred             EECCC
Confidence            99754

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1e-41  Score=298.33  Aligned_cols=282  Identities=21%  Similarity=0.316  Sum_probs=222.3

Q ss_pred             eEEEEEeCcc-ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         11 KEHSVTMPAT-WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        11 ~~~~~~~~~~-~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      ....+..|.. .|++++|+|+|++|++|+.|+.|++|++..... ........+|...|.++.|++++++|++|+.|+++
T Consensus         7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v   85 (345)
T 3fm0_A            7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT   85 (345)
T ss_dssp             EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence            4445566776 899999999999999999999999999853211 11112235799999999999999999999999999


Q ss_pred             EEEECCCc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc---EEEEeccCCccc----------
Q psy14961         90 ALWDVESS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY---CVQSFEGHHNLI----------  154 (320)
Q Consensus        90 ~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~---~~~~~~~~~~~~----------  154 (320)
                      ++|+++++  +.+..+.+|...|.+++|+|  ++++|++++.|+.|++||+..+.   ++..+.+|...+          
T Consensus        86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  163 (345)
T 3fm0_A           86 CIWKKNQDDFECVTTLEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE  163 (345)
T ss_dssp             EEEEECCC-EEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred             EEEEccCCCeEEEEEccCCCCCceEEEEeC--CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence            99998765  45678889999999998855  68899999999999999997653   344444443221          


Q ss_pred             -----cCCCeEEEEECcCCe--eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---------------
Q psy14961        155 -----TDDKLVNIWDMRTGY--CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE---------------  212 (320)
Q Consensus       155 -----~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~---------------  212 (320)
                           +.|+.|++||.+++.  +...+.+|...|.+++|+|+|++|++++.|++|++||......               
T Consensus       164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T 3fm0_A          164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC  243 (345)
T ss_dssp             CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred             EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence                 368999999998874  5578899999999999999999999999999999999632210               


Q ss_pred             EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe---------EEEEeecCCCceeEEEECcCC-CeEEEe
Q psy14961        213 VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC---------RVNHLMGHENRVSCLQVSPDG-TAFSSG  282 (320)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~---------~~~~~~~h~~~i~~i~~s~~~-~~l~s~  282 (320)
                      +...... ....+.+++|+|++..|++++.|+.|++|+.....         ....+.+|...|++++|+|++ .+||||
T Consensus       244 ~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~  322 (345)
T 3fm0_A          244 ICTLSGF-HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC  322 (345)
T ss_dssp             EEEECSS-CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred             eEEecCC-CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence            1111110 11236789999999999999999999999865321         112235899999999999987 599999


Q ss_pred             cCCCceEeeecchH
Q psy14961        283 SWDTTLRDEESKNR  296 (320)
Q Consensus       283 s~D~~ir~~~~~~~  296 (320)
                      |.|++|++|+..+.
T Consensus       323 s~Dg~v~~W~~~~~  336 (345)
T 3fm0_A          323 SDDGEVAFWKYQRP  336 (345)
T ss_dssp             ETTSCEEEEEECC-
T ss_pred             CCCCcEEEEEecCC
Confidence            99999999997554

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.2e-40  Score=289.71  Aligned_cols=278  Identities=23%  Similarity=0.381  Sum_probs=228.4

Q ss_pred             eEEEEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCCe
Q psy14961         11 KEHSVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT   88 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~   88 (320)
                      ....+..|...|++++|+|+ +++|+|||.|++|++||+...+.. ......+.+|...|.++.|++++++|++++.|+.
T Consensus        30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~  109 (340)
T 4aow_A           30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT  109 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence            33456679999999999997 689999999999999998643322 2334567889999999999999999999999999


Q ss_pred             EEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-eccCCc---------------
Q psy14961         89 CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEGHHN---------------  152 (320)
Q Consensus        89 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~~~---------------  152 (320)
                      |++|+............+...+....+  .++++.|++++.|+.+++||+........ ..+|..               
T Consensus       110 i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  187 (340)
T 4aow_A          110 LRLWDLTTGTTTRRFVGHTKDVLSVAF--SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI  187 (340)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEE--CTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred             ceEEeecccceeeeecCCCCceeEEEE--eecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence            999999988877777767777766555  45678999999999999999876543221 112211               


Q ss_pred             --cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961        153 --LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF  230 (320)
Q Consensus       153 --~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  230 (320)
                        ....|+.|++||++++++...+.+|...|.+++|+|++++|++|+.|+.|++||+++.+.+..+....   .+..+.|
T Consensus       188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~  264 (340)
T 4aow_A          188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---IINALCF  264 (340)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---CEEEEEE
T ss_pred             EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---eEEeeec
Confidence              11368899999999999999999999999999999999999999999999999999988877766543   3577889


Q ss_pred             ecCCcEEEEEeCCCeEEEEcCCCCeEEEEe---------ecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHL---------MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~---------~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +|++.++ +++.|+.|++||+.....+..+         .+|...|++++|+|||++|++|+.|++||+|+.+
T Consensus       265 ~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~  336 (340)
T 4aow_A          265 SPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT  336 (340)
T ss_dssp             CSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             CCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence            9988665 4556999999998877665443         4688999999999999999999999999999964

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=6e-41  Score=298.60  Aligned_cols=270  Identities=27%  Similarity=0.470  Sum_probs=221.7

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc------------------ccccCeEEEEecCCCC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA------------------THTSFISCCIFPNSDQ   78 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~------------------~h~~~v~~~~~~~~~~   78 (320)
                      .|...|.+++|+|+|++|++|+ ++.+++|++.....    ...+.                  .+...|.++.|+++++
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~  136 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL----VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK  136 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE----EEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE----EEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence            4888999999999999999987 68999999753211    11111                  1233589999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc------
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN------  152 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~------  152 (320)
                      +|++|+.|+.|++||+++++.+..+.+|...|.+++|.|  +++.|++++.|+.|++||++++++...+..+..      
T Consensus       137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~  214 (393)
T 1erj_A          137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV  214 (393)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC--CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE
Confidence            999999999999999999999999999999999988854  688999999999999999999887665532211      


Q ss_pred             ---------cccCCCeEEEEECcCCeeeeee-------cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE---
Q psy14961        153 ---------LITDDKLVNIWDMRTGYCVQSF-------EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV---  213 (320)
Q Consensus       153 ---------~~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~---  213 (320)
                               ..+.|+.|++||++++.++..+       .+|...|.+++|+|+|++|++|+.|++|++||++.....   
T Consensus       215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~  294 (393)
T 1erj_A          215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS  294 (393)
T ss_dssp             CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred             ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence                     1136889999999998877666       579999999999999999999999999999999764321   


Q ss_pred             ---------eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc------CCCe
Q psy14961        214 ---------ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP------DGTA  278 (320)
Q Consensus       214 ---------~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~------~~~~  278 (320)
                               ..+..+.  ..+.+++|+|++.+|++|+.|+.|++||..++.++..+.+|.+.|.+++|+|      ++++
T Consensus       295 ~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~  372 (393)
T 1erj_A          295 KTPNSGTCEVTYIGHK--DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV  372 (393)
T ss_dssp             ------CEEEEEECCS--SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEE
T ss_pred             cCCCCCcceEEEeccc--CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCE
Confidence                     1122221  1357899999999999999999999999999999999999999999999986      6889


Q ss_pred             EEEecCCCceEeeecch
Q psy14961        279 FSSGSWDTTLRDEESKN  295 (320)
Q Consensus       279 l~s~s~D~~ir~~~~~~  295 (320)
                      |||||.|++||+|+..+
T Consensus       373 l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          373 FATGSGDCKARIWKYKK  389 (393)
T ss_dssp             EEEEETTSEEEEEEEEE
T ss_pred             EEEECCCCcEEECcccc
Confidence            99999999999999753

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=6.6e-41  Score=311.94  Aligned_cols=277  Identities=29%  Similarity=0.503  Sum_probs=235.7

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++||.. .+....+..|...|.+++|+|++++|++++.|+.|++|+...     .....+..|...+.++.|+++++.+
T Consensus       286 i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-----~~~~~~~~~~~~v~~~~~s~~g~~l  359 (577)
T 2ymu_A          286 VKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-----QHLQTLTGHSSSVWGVAFSPDGQTI  359 (577)
T ss_dssp             EEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-----CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             EEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-----CeeEEEeCCCCCEEEEEECCCCCEE
Confidence            4689865 444455667889999999999999999999999999998642     2234567889999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------  154 (320)
                      ++++.|+.|++||. +++.+..+.+|...|.++++.  +++++|++++.|+.|++||. +++.+..+.+|...+      
T Consensus       360 ~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s--~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s  435 (577)
T 2ymu_A          360 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS  435 (577)
T ss_dssp             EEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC--TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC
T ss_pred             EEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC--CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC
Confidence            99999999999996 567778888999999988874  56899999999999999996 456666665554322      


Q ss_pred             ---------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        155 ---------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       155 ---------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                               ..|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++.+..+..+..  .+
T Consensus       436 ~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~~h~~--~v  511 (577)
T 2ymu_A          436 PDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSS--SV  511 (577)
T ss_dssp             TTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEECCSS--CE
T ss_pred             CCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEeCCCC--CE
Confidence                     35889999996 567888899999999999999999999999999999999964 555555554432  46


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+++|+|+|++|++|+.||.|++||. +++.+..+.+|.+.|++++|+|||++|+|+|.|++|++||
T Consensus       512 ~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          512 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            78999999999999999999999995 5678888999999999999999999999999999999997

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=6.9e-41  Score=314.49  Aligned_cols=287  Identities=17%  Similarity=0.217  Sum_probs=241.5

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      ++||+..+++....+..|...|++++|+|+|++||+|+.|++|++||+....  ......+..|...|.++.|+++++.|
T Consensus        41 v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~--~~~~~~~~~~~~~v~~v~fs~dg~~l  118 (611)
T 1nr0_A           41 VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT--HILKTTIPVFSGPVKDISWDSESKRI  118 (611)
T ss_dssp             EEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT--CCEEEEEECSSSCEEEEEECTTSCEE
T ss_pred             EEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc--ceeeEeecccCCceEEEEECCCCCEE
Confidence            4699998877777778899999999999999999999999999999984221  12234567899999999999999999


Q ss_pred             EEEeCC----CeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-
Q psy14961         81 LTGSGD----CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-  154 (320)
Q Consensus        81 ~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-  154 (320)
                      ++++.+    +.|++||  ++.....+.+|...|.+++|+|  ++. .|++++.|+.|++||...+++...+.+|...+ 
T Consensus       119 ~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p--~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~  194 (611)
T 1nr0_A          119 AAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKP--SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH  194 (611)
T ss_dssp             EEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECS--SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEE
T ss_pred             EEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECC--CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceE
Confidence            998865    4778887  4566778899999999999866  454 69999999999999999888888887776533 


Q ss_pred             --------------cCCCeEEEEECcCCeeeeeec-------CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961        155 --------------TDDKLVNIWDMRTGYCVQSFE-------GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV  213 (320)
Q Consensus       155 --------------~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~  213 (320)
                                    +.|+.|++||++++++...+.       +|...|.+++|+|+|++|++++.|++|++||+.+++.+
T Consensus       195 ~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~  274 (611)
T 1nr0_A          195 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE  274 (611)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             EEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence                          368999999999998887774       79999999999999999999999999999999988876


Q ss_pred             eEEecCcce-eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        214 ACYKKDSIL-FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       214 ~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ..+...... .....+.|  ++..+++++.|+.+++||.........+.+|...|++++|+|||++|++|+.|++|++|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd  352 (611)
T 1nr0_A          275 KTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD  352 (611)
T ss_dssp             EEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence            655432111 11233444  788999999999999999988888888899999999999999999999999999999999


Q ss_pred             cch
Q psy14961        293 SKN  295 (320)
Q Consensus       293 ~~~  295 (320)
                      ...
T Consensus       353 ~~~  355 (611)
T 1nr0_A          353 IST  355 (611)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            653

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-40  Score=286.98  Aligned_cols=278  Identities=20%  Similarity=0.315  Sum_probs=212.5

Q ss_pred             eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-c-ccccCeEEEEecCCCCEEEEEeCCC
Q psy14961         10 TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-A-THTSFISCCIFPNSDQQILTGSGDC   87 (320)
Q Consensus        10 ~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~l~s~~~dg   87 (320)
                      +....+..|...|++++|+|+  +|++|+.|+.|++|++.....  .....+ . .|...|.++.|++++++|++|+.|+
T Consensus         5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~   80 (330)
T 2hes_X            5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS   80 (330)
T ss_dssp             EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred             ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence            445567789999999999988  999999999999999853221  122233 3 3999999999999999999999999


Q ss_pred             eEEEEECCC-------cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC----cEEEEeccCCccc--
Q psy14961         88 TCALWDVES-------SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG----YCVQSFEGHHNLI--  154 (320)
Q Consensus        88 ~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~----~~~~~~~~~~~~~--  154 (320)
                      +|++||++.       .+++..+.+|...|.+++|+|  ++++|++|+.|+.|++||++..    +++..+.+|...+  
T Consensus        81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp--~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~  158 (330)
T 2hes_X           81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH  158 (330)
T ss_dssp             CEEEEEC-------CCCEEEEEEC----CEEEEEECT--TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred             cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC--CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence            999999853       345667889999999998855  6899999999999999999432    4555666654322  


Q ss_pred             -------------cCCCeEEEEECcCC--eeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCe------
Q psy14961        155 -------------TDDKLVNIWDMRTG--YCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADK------  211 (320)
Q Consensus       155 -------------~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~------  211 (320)
                                   +.|+.|++||.+++  +++..+.+|...|.+++|+|+  +..|++++.|++|++||++.+.      
T Consensus       159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~  238 (330)
T 2hes_X          159 VIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE  238 (330)
T ss_dssp             EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEE
T ss_pred             EEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccce
Confidence                         35899999999876  678889999999999999998  6789999999999999986431      


Q ss_pred             --eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe--EEE-EeecCCC-ceeEEEECc--CCCeEEEec
Q psy14961        212 --EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC--RVN-HLMGHEN-RVSCLQVSP--DGTAFSSGS  283 (320)
Q Consensus       212 --~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~--~~~-~~~~h~~-~i~~i~~s~--~~~~l~s~s  283 (320)
                        ....+.. .....+.+++|++++ +|++|+.||.|++||...+.  ... .+.+|.. .|++++|+|  ++++|||||
T Consensus       239 ~~~~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s  316 (330)
T 2hes_X          239 WVCEAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG  316 (330)
T ss_dssp             EEEEEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred             eEEeeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence              1111211 011246789999665 89999999999999977653  232 2357887 899999999  789999999


Q ss_pred             CCCceEeeecch
Q psy14961        284 WDTTLRDEESKN  295 (320)
Q Consensus       284 ~D~~ir~~~~~~  295 (320)
                      .|++|++|+.+.
T Consensus       317 ~Dg~v~~W~~~~  328 (330)
T 2hes_X          317 DDGIVNFWSLEK  328 (330)
T ss_dssp             TTSEEEEEEC--
T ss_pred             CCCcEEEEEecc
Confidence            999999999754

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=2.3e-39  Score=308.43  Aligned_cols=276  Identities=23%  Similarity=0.372  Sum_probs=228.3

Q ss_pred             EEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         13 HSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      ..+..|...|++++|+|++ .+|++|+.|++|++|++...... ......+.+|...|.++.|++++++|++|+.||+|+
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~  455 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR  455 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence            3466899999999999865 69999999999999998643221 123346778999999999999999999999999999


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---ccCCc---------------
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---EGHHN---------------  152 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~---~~~~~---------------  152 (320)
                      +||+.++..+..+.+|...|.++++++  +++.|++++.|+.|++||+.........   .+|..               
T Consensus       456 vwd~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~  533 (694)
T 3dm0_A          456 LWDLAAGVSTRRFVGHTKDVLSVAFSL--DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT  533 (694)
T ss_dssp             EEETTTTEEEEEEECCSSCEEEEEECT--TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred             EEECCCCcceeEEeCCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence            999999999999999999999988854  6889999999999999998654322211   11111               


Q ss_pred             c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961        153 L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF  230 (320)
Q Consensus       153 ~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  230 (320)
                      +  .+.|+.|++||++++++...+.+|...|.+++|+|+|++|++|+.||+|++||+++++.+..+....   .+.+++|
T Consensus       534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~  610 (694)
T 3dm0_A          534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS---VIHALCF  610 (694)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS---CEEEEEE
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC---cEEEEEE
Confidence            1  2468999999999999999999999999999999999999999999999999999988766554432   3578999


Q ss_pred             ecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-------------------CceeEEEECcCCCeEEEecCCCceEee
Q psy14961        231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-------------------NRVSCLQVSPDGTAFSSGSWDTTLRDE  291 (320)
Q Consensus       231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-------------------~~i~~i~~s~~~~~l~s~s~D~~ir~~  291 (320)
                      +|++.+|++++ ++.|++||+.+...+..+..|.                   ..+++++|||||++|+|||.|++||+|
T Consensus       611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW  689 (694)
T 3dm0_A          611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW  689 (694)
T ss_dssp             CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence            99999888876 5569999999887776554321                   237899999999999999999999999


Q ss_pred             ecc
Q psy14961        292 ESK  294 (320)
Q Consensus       292 ~~~  294 (320)
                      +..
T Consensus       690 ~i~  692 (694)
T 3dm0_A          690 GIG  692 (694)
T ss_dssp             EC-
T ss_pred             ecc
Confidence            974

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-39  Score=286.82  Aligned_cols=290  Identities=14%  Similarity=0.237  Sum_probs=237.0

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEe----cccCC------ccccccccc------cc
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAI----ALEDD------SSAKKKTVA------TH   64 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~----~~~~~------~~~~~~~~~------~h   64 (320)
                      .+|+............|...|.+++|+|+++ +|++|+.||.|++|++    .....      .......+.      .|
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (425)
T 1r5m_A           28 SSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKT  107 (425)
T ss_dssp             ------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------
T ss_pred             ccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCC
Confidence            3677776666555566778999999999999 9999999999999998    43221      111111122      26


Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV  144 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~  144 (320)
                      ...|.++.|++++++|++++.||.|++|| .+++.+..+..|...|.++++.|  +++.|++++.|+.|++||+.+++.+
T Consensus       108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~  184 (425)
T 1r5m_A          108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK--DGTHIISMDVENVTILWNVISGTVM  184 (425)
T ss_dssp             CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT--TSSEEEEEETTCCEEEEETTTTEEE
T ss_pred             CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC--CCCEEEEEecCCeEEEEECCCCcEE
Confidence            77999999999999999999999999999 56778888889999999988854  6889999999999999999998887


Q ss_pred             EEeccCCcc-----------------------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE
Q psy14961        145 QSFEGHHNL-----------------------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT  195 (320)
Q Consensus       145 ~~~~~~~~~-----------------------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s  195 (320)
                      ..+..+...                             ...++.|++||++++++...+.+|...|.+++|+|++++|++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  264 (425)
T 1r5m_A          185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS  264 (425)
T ss_dssp             EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred             EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence            766544322                             135788999999999999899999999999999999999999


Q ss_pred             eeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcC
Q psy14961        196 GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       196 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~  275 (320)
                      ++.|+.|++||++.++....+..+..  .+..+.|+|++ ++++++.|+.|++||+.+...+..+..|...|.+++|+|+
T Consensus       265 ~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~  341 (425)
T 1r5m_A          265 ASDDGTLRIWHGGNGNSQNCFYGHSQ--SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD  341 (425)
T ss_dssp             EETTSCEEEECSSSBSCSEEECCCSS--CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT
T ss_pred             EcCCCEEEEEECCCCccceEecCCCc--cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC
Confidence            99999999999998776665543322  46789999999 9999999999999999999999999999999999999999


Q ss_pred             CCeEEEecCCCceEeeecchHh
Q psy14961        276 GTAFSSGSWDTTLRDEESKNRY  297 (320)
Q Consensus       276 ~~~l~s~s~D~~ir~~~~~~~~  297 (320)
                      +++|++++.|+.|++|+..+.-
T Consensus       342 ~~~l~~~~~dg~i~i~~~~~~~  363 (425)
T 1r5m_A          342 GQKYAVAFMDGQVNVYDLKKLN  363 (425)
T ss_dssp             SSEEEEEETTSCEEEEECHHHH
T ss_pred             CCEEEEEECCCeEEEEECCCCc
Confidence            9999999999999999976543

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=8.5e-39  Score=297.71  Aligned_cols=280  Identities=28%  Similarity=0.473  Sum_probs=235.1

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++||.. .+....+..|...|.+++|+|+++.|++++.|+.+++|+...     .....+.+|...|.++.|+++++.+
T Consensus       245 i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l  318 (577)
T 2ymu_A          245 VKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVWGVAFSPDGQTI  318 (577)
T ss_dssp             EEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-----CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             EEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-----cEEEEEecCCCCeEEEEECCCCCEE
Confidence            4689954 455556677889999999999999999999999999998632     2344567899999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------  154 (320)
                      ++++.|++|++||.... .+..+.+|...+.++++.  ++++.|++++.|+.+++||. +++.+..+.+|...+      
T Consensus       319 ~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s  394 (577)
T 2ymu_A          319 ASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFS--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS  394 (577)
T ss_dssp             EEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEEC--TTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC
T ss_pred             EEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEEC--CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC
Confidence            99999999999998654 456678899999888774  56899999999999999996 456666665554322      


Q ss_pred             ---------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        155 ---------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       155 ---------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                               ..|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||... +.+..+..+..  .+
T Consensus       395 ~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~--~v  470 (577)
T 2ymu_A          395 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLTGHSS--SV  470 (577)
T ss_dssp             TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEECCSS--CE
T ss_pred             CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEEEcCCCC--CE
Confidence                     35889999995 6678888999999999999999999999999999999999754 44444443332  46


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++|+|+|||++||+++.|++|++|+...
T Consensus       471 ~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~  539 (577)
T 2ymu_A          471 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG  539 (577)
T ss_dssp             EEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred             EEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence            78999999999999999999999995 5678888999999999999999999999999999999999643

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-38  Score=277.16  Aligned_cols=279  Identities=19%  Similarity=0.280  Sum_probs=238.4

Q ss_pred             eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      ....+..|...|++++|+|++++|++|+.||.|++|++..    ......+..|...|.++.|++++++|++++.||.|+
T Consensus        24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~   99 (369)
T 3zwl_B           24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN----GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK   99 (369)
T ss_dssp             EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred             ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC----chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence            3345677899999999999999999999999999999753    233456778999999999999999999999999999


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-----CeEEEEeCCCCcE-----------EEEeccCC---
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-----KLVNIWDMRTGYC-----------VQSFEGHH---  151 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g~i~lwd~~~~~~-----------~~~~~~~~---  151 (320)
                      +||+.+++.+..+. +...+.++++.  ++++.+++++.+     +.|++||+..+..           +..+..+.   
T Consensus       100 iwd~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (369)
T 3zwl_B          100 LWDVSNGQCVATWK-SPVPVKRVEFS--PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD  176 (369)
T ss_dssp             EEETTTCCEEEEEE-CSSCEEEEEEC--TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred             EEECCCCcEEEEee-cCCCeEEEEEc--cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence            99999999888877 78889888775  468899999999     9999999865431           11111111   


Q ss_pred             -----------c---cccCCCeEEEEECcC-CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        152 -----------N---LITDDKLVNIWDMRT-GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       152 -----------~---~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                                 .   ....++.|++||+++ ......+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus       177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~  256 (369)
T 3zwl_B          177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY  256 (369)
T ss_dssp             CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence                       1   124689999999998 7888899999999999999999999999999999999999998877766


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCCC--------------eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEe
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYNDY--------------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg--------------~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      ....   .+..+.|+|++.++++++.++              .+++||......+..+.+|...|++++|+|++++|+++
T Consensus       257 ~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  333 (369)
T 3zwl_B          257 ETDC---PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG  333 (369)
T ss_dssp             ECSS---CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             cCCC---CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence            6432   357889999999999999888              89999999999999999999999999999999999999


Q ss_pred             cCCCceEeeecchHhhh
Q psy14961        283 SWDTTLRDEESKNRYVQ  299 (320)
Q Consensus       283 s~D~~ir~~~~~~~~~~  299 (320)
                      +.|++|++|+..+....
T Consensus       334 ~~dg~v~iw~~~~~~~~  350 (369)
T 3zwl_B          334 GEDGFIRLHHFEKSYFD  350 (369)
T ss_dssp             ETTSEEEEEEECHHHHT
T ss_pred             cCCCeEEEEECccccch
Confidence            99999999998776544

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.5e-39  Score=277.35  Aligned_cols=235  Identities=26%  Similarity=0.354  Sum_probs=205.2

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ..++.+|...|.++.|+|++++|++|+.||+|++||++++..+..+..|..++.++++.+  ++++|++|+.|+.|++||
T Consensus         6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~vwd   83 (304)
T 2ynn_A            6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA--RKNWIIVGSDDFRIRVFN   83 (304)
T ss_dssp             EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG--GGTEEEEEETTSEEEEEE
T ss_pred             EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC--CCCEEEEECCCCEEEEEE
Confidence            346778999999999999999999999999999999999999999999999999998866  578999999999999999


Q ss_pred             CCCCcEEEEeccCCccc---------------cCCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCC
Q psy14961        138 MRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDA  200 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg  200 (320)
                      +.+++.+..+.+|...+               +.|+.|++||++++ .+...+.+|...|.+++|+| ++..|++|+.|+
T Consensus        84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~  163 (304)
T 2ynn_A           84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR  163 (304)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred             CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence            99999988887776543               36899999999887 55677899999999999999 578999999999


Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEec--CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCe
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA  278 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~  278 (320)
                      +|++||++............. ..+..+.|+|  ++.+|++|+.|++|++||+.++..+.++.+|...|.+++|+|++++
T Consensus       164 ~v~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~  242 (304)
T 2ynn_A          164 TVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI  242 (304)
T ss_dssp             EEEEEETTCSSCSEEEECCCT-TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred             eEEEEECCCCCccceeccCCc-CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence            999999987665443332211 1345667765  7889999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCceEeeecch
Q psy14961        279 FSSGSWDTTLRDEESKN  295 (320)
Q Consensus       279 l~s~s~D~~ir~~~~~~  295 (320)
                      |+|||.|++||+|+...
T Consensus       243 l~s~s~Dg~i~iWd~~~  259 (304)
T 2ynn_A          243 IISGSEDGTLKIWNSST  259 (304)
T ss_dssp             EEEEETTSCEEEEETTT
T ss_pred             EEEEcCCCeEEEEECCC
Confidence            99999999999999754

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.9e-39  Score=278.05  Aligned_cols=250  Identities=15%  Similarity=0.185  Sum_probs=202.6

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCALWD   93 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd   93 (320)
                      ..|...|.+++|+|+|++|++|+.|+.|++|++...  .......+.+|...|.++.|+++  ++.|++|+.|++|++||
T Consensus         6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~--~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE--THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS--CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC--CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            458889999999999999999999999999998532  22344577899999999999753  78999999999999999


Q ss_pred             CCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         94 VESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        94 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      +++++  .+..+..|...|.+++|+|...+..|++++.|+.|++||++.+...                         ..
T Consensus        84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-------------------------~~  138 (297)
T 2pm7_B           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-------------------------SP  138 (297)
T ss_dssp             BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-------------------------CC
T ss_pred             cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-------------------------ee
Confidence            98764  4556778999999999987655789999999999999998754210                         01


Q ss_pred             eeecCCCCCeEEEEEcCC-------------CCEEEEeeCCCeEEEEECCCCe----eEeEEecCcceeeeEEEEEecCC
Q psy14961        172 QSFEGHQSDVNSVKFHPS-------------GDAVATGSDDATCRLFDLRADK----EVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p~-------------g~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                      ..+.+|...|.+++|+|+             +++|++|+.|++|++||+++++    ....+..+.  ..+.+++|+|++
T Consensus       139 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~--~~V~~v~~sp~~  216 (297)
T 2pm7_B          139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTV  216 (297)
T ss_dssp             EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCC
T ss_pred             eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC--CceEEEEECCCC
Confidence            234578889999999997             5689999999999999998654    222333222  246889999985


Q ss_pred             ---cEEEEEeCCCeEEEEcCCCCe---EEEEe--ecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        235 ---RLLFAGYNDYTINVWDSLKCC---RVNHL--MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       235 ---~~l~~g~~dg~v~~wd~~~~~---~~~~~--~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                         .+|++|+.|++|++||.....   ....+  .+|...|.+++|+|+|++||+++.|++|++|+..
T Consensus       217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             CCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence               899999999999999976532   11222  4688899999999999999999999999999964

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-40  Score=296.46  Aligned_cols=291  Identities=14%  Similarity=0.215  Sum_probs=235.3

Q ss_pred             CeEeecccceeE--EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-C
Q psy14961          1 MIIWDGLTQTKE--HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-D   77 (320)
Q Consensus         1 ~~~W~~~~~~~~--~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~   77 (320)
                      |+|||..++...  .....+...|.+++|+|++++|++|+.||.|++|++............+..|...|.++.|+++ +
T Consensus        47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  126 (416)
T 2pm9_A           47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQD  126 (416)
T ss_dssp             CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSST
T ss_pred             EEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCC
Confidence            579999877522  2223467889999999999999999999999999986422222345567789999999999998 8


Q ss_pred             CEEEEEeCCCeEEEEECCCcc------ee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         78 QQILTGSGDCTCALWDVESSQ------LL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~------~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      .+|++++.|+.|++||+.+++      ..   ..+..|...+.++++.+. .+..|++++.|+.|++||+++++.+..+.
T Consensus       127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  205 (416)
T 2pm9_A          127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQS-LAHVFASAGSSNFASIWDLKAKKEVIHLS  205 (416)
T ss_dssp             TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSS-CTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred             CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCC-CCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence            899999999999999998876      22   234678899999988653 15799999999999999999988777665


Q ss_pred             cC------Ccc----------------ccCCC---eEEEEECcCC-eeeeeec-CCCCCeEEEEEcC-CCCEEEEeeCCC
Q psy14961        149 GH------HNL----------------ITDDK---LVNIWDMRTG-YCVQSFE-GHQSDVNSVKFHP-SGDAVATGSDDA  200 (320)
Q Consensus       149 ~~------~~~----------------~~~d~---~i~iwd~~~~-~~~~~~~-~~~~~v~~v~~~p-~g~~l~s~s~dg  200 (320)
                      .+      ...                ...++   .|++||++++ .+...+. +|...|.+++|+| ++++|++++.|+
T Consensus       206 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg  285 (416)
T 2pm9_A          206 YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN  285 (416)
T ss_dssp             CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS
T ss_pred             ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC
Confidence            43      111                12456   9999999986 6777787 8999999999999 899999999999


Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEee------------------
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHLM------------------  261 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~~------------------  261 (320)
                      .|++||+++++.+..+..+..  .+.+++|+|++ .+|++++.|+.|++||+..........                  
T Consensus       286 ~v~~wd~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (416)
T 2pm9_A          286 TVLLWNPESAEQLSQFPARGN--WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVS  363 (416)
T ss_dssp             EEEEECSSSCCEEEEEECSSS--CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------------
T ss_pred             CEEEeeCCCCccceeecCCCC--ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccc
Confidence            999999999888777665432  35688999999 899999999999999987654322111                  


Q ss_pred             -----------------cCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        262 -----------------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       262 -----------------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                                       .|..++.+++|+|||++|++++.|++|++|+..
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~  413 (416)
T 2pm9_A          364 REESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK  413 (416)
T ss_dssp             ---CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred             ccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence                             167788999999999999999999999999964

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.2e-39  Score=286.14  Aligned_cols=283  Identities=17%  Similarity=0.207  Sum_probs=235.8

Q ss_pred             CeEeec----ccce------eEEEEEe----------CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc
Q psy14961          1 MIIWDG----LTQT------KEHSVTM----------PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT   60 (320)
Q Consensus         1 ~~~W~~----~~~~------~~~~~~~----------~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~   60 (320)
                      |++||.    .+++      ....+..          |...|.+++|+|++++|++|+.||.|++|+..     ......
T Consensus        70 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-----~~~~~~  144 (425)
T 1r5m_A           70 ARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-----GALLNV  144 (425)
T ss_dssp             EEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEE
T ss_pred             EEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-----CCeeee
Confidence            468999    7666      3333333          46689999999999999999999999999832     233456


Q ss_pred             ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc---------------eeEEEEeeCCCCCEEE
Q psy14961         61 VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE---------------LMDLDLAPSETGNTFV  125 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~~l~  125 (320)
                      +..|...|.++.|+++++.|++++.|+.|++||+.+++.+..+..+...               +.++.+.+.   ..++
T Consensus       145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  221 (425)
T 1r5m_A          145 LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD---DKFV  221 (425)
T ss_dssp             ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET---TEEE
T ss_pred             ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC---CEEE
Confidence            6789999999999999999999999999999999999888888777666               788888763   5799


Q ss_pred             EEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC
Q psy14961        126 SGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG  190 (320)
Q Consensus       126 s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g  190 (320)
                      +++.|+.|++||++++..+..+..|...+               ..++.|++||++++++...+.+|...|.+++|+|++
T Consensus       222 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (425)
T 1r5m_A          222 IPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD  301 (425)
T ss_dssp             EECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT
T ss_pred             EEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC
Confidence            99999999999999887666665444322               358899999999999999999999999999999999


Q ss_pred             CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe---------------
Q psy14961        191 DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC---------------  255 (320)
Q Consensus       191 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~---------------  255 (320)
                       .+++++.|+.|++||+++++.+..+..+..  .+..++|+|++++|++|+.||.|++||+.+..               
T Consensus       302 -~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~  378 (425)
T 1r5m_A          302 -KVISCSMDGSVRLWSLKQNTLLALSIVDGV--PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN  378 (425)
T ss_dssp             -EEEEEETTSEEEEEETTTTEEEEEEECTTC--CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred             -EEEEEeCCCcEEEEECCCCcEeEecccCCc--cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence             999999999999999999887766654332  46789999999999999999999999988777               


Q ss_pred             -----EEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        256 -----RVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       256 -----~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                           .+..+.+|..  .|++++|+|++++|++++.|++|++|+.+
T Consensus       379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             cccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence                 7888889976  99999999999999999999999999964

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=6.3e-38  Score=271.73  Aligned_cols=282  Identities=18%  Similarity=0.304  Sum_probs=232.2

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc--cccccCeEEEEecCCCCEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV--ATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l   80 (320)
                      +|+............|...|.+++|+|++++|++++ ||.|++|++...... .....+  ..|...|.++.|+++++.+
T Consensus        35 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l  112 (337)
T 1gxr_A           35 GPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-SPVSQLDCLNRDNYIRSCKLLPDGCTL  112 (337)
T ss_dssp             STTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-SCSEEEECSCTTSBEEEEEECTTSSEE
T ss_pred             ccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce-eeeecccccCCCCcEEEEEEcCCCCEE
Confidence            344444444444456888999999999999999999 999999998643221 112222  2688999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----
Q psy14961         81 LTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI----  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~----  154 (320)
                      ++++.|+.|++||+.+++  ....+..|...+.++++.+  +++.+++++.|+.|++||+++++.+..+..|...+    
T Consensus       113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~  190 (337)
T 1gxr_A          113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID  190 (337)
T ss_dssp             EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             EEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence            999999999999998876  5566778888898888754  68899999999999999999998887776654322    


Q ss_pred             -----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        155 -----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       155 -----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                                 +.++.|++||++++++...+. |...+.+++|+|+++++++++.|+.|++||++.++......+.   .
T Consensus       191 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~  266 (337)
T 1gxr_A          191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE---S  266 (337)
T ss_dssp             ECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS---S
T ss_pred             ECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCc---c
Confidence                       358899999999998887764 7788999999999999999999999999999987654322222   2


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .+..++|+|++++|++++.||.|++||..++..+. ...|...|.+++|+|++++|++++.|+.|++|+.
T Consensus       267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF-QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE-EecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            46789999999999999999999999998877764 4568899999999999999999999999999985

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.2e-39  Score=288.56  Aligned_cols=288  Identities=12%  Similarity=0.160  Sum_probs=227.5

Q ss_pred             EeecccceeEEEE-EeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccccc-ccccccccCeEEEEecCCCCE
Q psy14961          3 IWDGLTQTKEHSV-TMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKK-KTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         3 ~W~~~~~~~~~~~-~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      .|+ .+++....+ ..|...|++++|+| ++++|++|+.||.|++||+.......... .....|...|.++.|+++++.
T Consensus        47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  125 (437)
T 3gre_A           47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA  125 (437)
T ss_dssp             GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred             ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence            466 345555666 56789999999999 99999999999999999986411111111 112258999999999999999


Q ss_pred             EEEEeCCCeEEEEECC---Ccceeeecc----------c--CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961         80 ILTGSGDCTCALWDVE---SSQLLQSFH----------G--HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV  144 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~---~~~~~~~~~----------~--~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~  144 (320)
                      |++|+.||.|++||++   +++.+..+.          .  +...+.++.+.+.+++..|++++.|+.|++||+++++++
T Consensus       126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  205 (437)
T 3gre_A          126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL  205 (437)
T ss_dssp             EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence            9999999999999984   444333222          1  445566666666778899999999999999999999988


Q ss_pred             EEecc--CCccc---------------cCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcC----CCCEEEEeeCCCeE
Q psy14961        145 QSFEG--HHNLI---------------TDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHP----SGDAVATGSDDATC  202 (320)
Q Consensus       145 ~~~~~--~~~~~---------------~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p----~g~~l~s~s~dg~i  202 (320)
                      ..+..  |...+               +.|+.|++||+++++++..+. +|..+|.+++|+|    ++.+|++++.||.|
T Consensus       206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i  285 (437)
T 3gre_A          206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL  285 (437)
T ss_dssp             EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred             EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence            88776  33322               358899999999999998876 7888999996665    57799999999999


Q ss_pred             EEEECCCCeeEeEEecCc------------------------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961        203 RLFDLRADKEVACYKKDS------------------------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN  258 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~  258 (320)
                      ++||+++++.+..+..+.                        ....+.+++|+ ++.+|++|+.|+.|++||+.++....
T Consensus       286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~  364 (437)
T 3gre_A          286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK  364 (437)
T ss_dssp             EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred             EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence            999999888766655321                        11125678899 78999999999999999998876665


Q ss_pred             Eeec-------------------------------------CCCceeEEEECcC--CCeEEEecCCCceEeee
Q psy14961        259 HLMG-------------------------------------HENRVSCLQVSPD--GTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       259 ~~~~-------------------------------------h~~~i~~i~~s~~--~~~l~s~s~D~~ir~~~  292 (320)
                      .+.+                                     |.+.|++|+|+++  +.+|+||+.||+|++|+
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            5554                                     8999999999998  88999999999999995

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.4e-38  Score=283.35  Aligned_cols=233  Identities=27%  Similarity=0.506  Sum_probs=209.9

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      ..+.+|...|.++.|+++++.+++|+.||+|++||+.+++....+.+|...|.+++|++  ++++|++|+.|+.|++||+
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~--~~~~l~sgs~D~~i~iwd~  179 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH--SGKLLASCSADMTIKLWDF  179 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT--TSSEEEEEETTSCCCEEET
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEeC
Confidence            35678999999999999999999999999999999999999999999999999998854  6889999999999999999


Q ss_pred             CCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEE
Q psy14961        139 RTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCR  203 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~  203 (320)
                      .+++++..+.+|...+               +.|+.|++||++++.++..+.+|...|.+++++|++.++++|+.|++|+
T Consensus       180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~  259 (410)
T 1vyh_C          180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR  259 (410)
T ss_dssp             TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence            9998888777665432               3689999999999999999999999999999999999999999999999


Q ss_pred             EEECCCCeeEeEEecCcceeeeEEEEEecC--------------------CcEEEEEeCCCeEEEEcCCCCeEEEEeecC
Q psy14961        204 LFDLRADKEVACYKKDSILFGATSVDFSVS--------------------GRLLFAGYNDYTINVWDSLKCCRVNHLMGH  263 (320)
Q Consensus       204 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h  263 (320)
                      +||+++++....+..+..  .+.+++|+|+                    +.+|++|+.|++|++||+.++..+..+.+|
T Consensus       260 vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h  337 (410)
T 1vyh_C          260 VWVVATKECKAELREHRH--VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  337 (410)
T ss_dssp             EEETTTCCEEEEECCCSS--CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEECCCCceeeEecCCCc--eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence            999998877665544432  3578889986                    678999999999999999999999999999


Q ss_pred             CCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        264 ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       264 ~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .+.|++++|+|++++|++||.|++||+|+..+
T Consensus       338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~  369 (410)
T 1vyh_C          338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKN  369 (410)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            99999999999999999999999999999754

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=3.5e-39  Score=278.93  Aligned_cols=252  Identities=15%  Similarity=0.142  Sum_probs=200.6

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCCEEEEEeCCCeEEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQQILTGSGDCTCALWD   93 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd   93 (320)
                      ..|...|++++|+|+|++|++|+.|++|++||+...  .......+.+|...|.++.|++  +++.|++|+.|++|++||
T Consensus        10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~--~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A           10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG--GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETT--EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC--CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            468889999999999999999999999999998532  1123456789999999999965  378999999999999999


Q ss_pred             CCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         94 VESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        94 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      ++++.  ....+.+|...|.+++|+|..++.+|++|+.|+.|++||++.+...                        ...
T Consensus        88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~------------------------~~~  143 (316)
T 3bg1_A           88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW------------------------EVK  143 (316)
T ss_dssp             CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE------------------------EEC
T ss_pred             CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc------------------------cee
Confidence            98763  5566788999999999987656889999999999999998754211                        012


Q ss_pred             eeecCCCCCeEEEEEcCC-----------------CCEEEEeeCCCeEEEEECCCCe---eEeEEecCcceeeeEEEEEe
Q psy14961        172 QSFEGHQSDVNSVKFHPS-----------------GDAVATGSDDATCRLFDLRADK---EVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p~-----------------g~~l~s~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~s  231 (320)
                      ..+.+|...|.+++|+|+                 +++|++|+.|++|++||++...   .+..+..+.  ..+.+++|+
T Consensus       144 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~--~~V~~v~~s  221 (316)
T 3bg1_A          144 KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS--DWVRDVAWA  221 (316)
T ss_dssp             CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS--SCEEEEECC
T ss_pred             eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC--CceEEEEec
Confidence            234568888899999987                 4689999999999999997542   333333222  246789999


Q ss_pred             cCC----cEEEEEeCCCeEEEEcCCCC---e-EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        232 VSG----RLLFAGYNDYTINVWDSLKC---C-RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       232 ~~~----~~l~~g~~dg~v~~wd~~~~---~-~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      |++    .+|++|+.|++|++||....   . ....+.+|.+.|.+++|+|++++||+|+.|++|++|+...
T Consensus       222 p~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          222 PSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             CCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             CCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence            987    89999999999999997652   1 2234567899999999999999999999999999999653

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=4e-38  Score=279.74  Aligned_cols=278  Identities=17%  Similarity=0.179  Sum_probs=231.2

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC--cccccccccccccCeEEEEecCC----C---CEEEEEeC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIFPNS----D---QQILTGSG   85 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~----~---~~l~s~~~   85 (320)
                      +..|...|++++|+|  ++|++|+.||.|++|++.....  .......+..|...|.++.|+++    +   .+|++++.
T Consensus        12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~   89 (397)
T 1sq9_A           12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF   89 (397)
T ss_dssp             SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred             hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence            446889999999999  7999999999999999864321  11234566789999999999988    8   89999999


Q ss_pred             CCeEEEEECCCcce-----eeecccC-----ccceeEEEEeeC--CCCCE-EEEEeCCCeEEEEeCCC------CcEEE-
Q psy14961         86 DCTCALWDVESSQL-----LQSFHGH-----TGELMDLDLAPS--ETGNT-FVSGSSDKLVNIWDMRT------GYCVQ-  145 (320)
Q Consensus        86 dg~v~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~~~--~~~~~-l~s~~~dg~i~lwd~~~------~~~~~-  145 (320)
                      ||.|++||+.+++.     +..+..|     ...|.++++.+.  ++++. |++++.||.|++||++.      +..+. 
T Consensus        90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  169 (397)
T 1sq9_A           90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW  169 (397)
T ss_dssp             TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred             CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence            99999999988876     7778888     588999998732  46889 99999999999999987      54433 


Q ss_pred             ----Eecc-------CCc-----------c---ccCCCeEEEEECcCCeeeeeecC---C---CCCeEEEEEcCCCCEEE
Q psy14961        146 ----SFEG-------HHN-----------L---ITDDKLVNIWDMRTGYCVQSFEG---H---QSDVNSVKFHPSGDAVA  194 (320)
Q Consensus       146 ----~~~~-------~~~-----------~---~~~d~~i~iwd~~~~~~~~~~~~---~---~~~v~~v~~~p~g~~l~  194 (320)
                          .+.+       +..           .   ...++.|++||+++++++..+..   |   ...|.+++|+|++++|+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~  249 (397)
T 1sq9_A          170 SPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA  249 (397)
T ss_dssp             CCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE
T ss_pred             cCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEE
Confidence                3321       111           1   13578999999999999999998   9   99999999999999999


Q ss_pred             EeeCC---CeEEEEECCCCeeEeEEecCc-----------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961        195 TGSDD---ATCRLFDLRADKEVACYKKDS-----------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL  260 (320)
Q Consensus       195 s~s~d---g~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~  260 (320)
                      +++.|   +.|++||+++++.+..+....           ....+.+++|+|++.+|++|+.||.|++||+.+...+..+
T Consensus       250 ~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  329 (397)
T 1sq9_A          250 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL  329 (397)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             EEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence            99999   999999999888776665410           1124678999999999999999999999999999999989


Q ss_pred             e------cC---------------CCceeEEEECcCC----------CeEEEecCCCceEeeecc
Q psy14961        261 M------GH---------------ENRVSCLQVSPDG----------TAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       261 ~------~h---------------~~~i~~i~~s~~~----------~~l~s~s~D~~ir~~~~~  294 (320)
                      .      +|               ..+|++++|+|++          ++|++|+.|+.|++|+..
T Consensus       330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~  394 (397)
T 1sq9_A          330 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA  394 (397)
T ss_dssp             ECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred             ecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence            8      88               9999999999998          799999999999999974

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=7.8e-38  Score=273.49  Aligned_cols=276  Identities=20%  Similarity=0.281  Sum_probs=221.9

Q ss_pred             EeCccceEEEEEcCCCCEE-EEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCC---CCEEEEEeCCCe
Q psy14961         16 TMPATWVMACAYAPSGSVV-ASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS---DQQILTGSGDCT   88 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l-~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~   88 (320)
                      ..|...|.+++|+|++..+ ++|+.   |+.|++|++....   ........|...|.++.|+++   +.++++|+.||.
T Consensus        15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~   91 (357)
T 3i2n_A           15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD---LKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN   91 (357)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS---EEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred             cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc---ccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence            4588999999999999655 56665   8999999986322   111223378899999999988   689999999999


Q ss_pred             EEEEECCCcc-eeeecccCccceeEEEEee----CCCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCc----------
Q psy14961         89 CALWDVESSQ-LLQSFHGHTGELMDLDLAP----SETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHN----------  152 (320)
Q Consensus        89 v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~----~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~----------  152 (320)
                      |++||+.+++ .+..+.+|...|.++.+.+    +++++.|++++.|+.|++||++++. .+..+..+..          
T Consensus        92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~  171 (357)
T 3i2n_A           92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA  171 (357)
T ss_dssp             EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred             EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence            9999999887 8888899999999998753    6788999999999999999998875 4444432211          


Q ss_pred             ----------c---ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC---CCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        153 ----------L---ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP---SGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       153 ----------~---~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p---~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                                .   ...++.|++||+++++.... ..|...|.+++|+|   ++.+|++++.||.|++||+++++....+
T Consensus       172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  250 (357)
T 3i2n_A          172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF  250 (357)
T ss_dssp             EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred             EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence                      1   13578999999999887544 56889999999999   8999999999999999999876543333


Q ss_pred             e---cCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCC-------------------eEEEEeecCCCceeEEEEC
Q psy14961        217 K---KDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKC-------------------CRVNHLMGHENRVSCLQVS  273 (320)
Q Consensus       217 ~---~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~-------------------~~~~~~~~h~~~i~~i~~s  273 (320)
                      .   .......+.+++|+|++. +|++|+.||.|++||+...                   ..+..+.+|..+|++++|+
T Consensus       251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s  330 (357)
T 3i2n_A          251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWS  330 (357)
T ss_dssp             EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEEC
T ss_pred             eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEc
Confidence            2   001122467899999999 8999999999999997532                   4567788999999999999


Q ss_pred             cCCCeEE-EecCCCceEeeecch
Q psy14961        274 PDGTAFS-SGSWDTTLRDEESKN  295 (320)
Q Consensus       274 ~~~~~l~-s~s~D~~ir~~~~~~  295 (320)
                      |++++|+ +++.|++|++|+..+
T Consensus       331 ~~~~~l~~s~~~d~~i~iw~~~~  353 (357)
T 3i2n_A          331 PDKRGLCVCSSFDQTVRVLIVTK  353 (357)
T ss_dssp             SSSTTEEEEEETTSEEEEEEECC
T ss_pred             CCCCeEEEEecCCCcEEEEECCC
Confidence            9999998 899999999999754

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.6e-38  Score=278.55  Aligned_cols=283  Identities=15%  Similarity=0.184  Sum_probs=220.3

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQI   80 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l   80 (320)
                      +|+..+.+....+..|...|.+++|+|++ ++|++|+.||.|++|++.....  .......+|...|.++.|++ ++..|
T Consensus        57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l  134 (383)
T 3ei3_B           57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK--TSFIQGMGPGDAITGMKFNQFNTNQL  134 (383)
T ss_dssp             HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC--EEEECCCSTTCBEEEEEEETTEEEEE
T ss_pred             cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc--ceeeecCCcCCceeEEEeCCCCCCEE
Confidence            34445555556667788999999999999 9999999999999999863221  12222346999999999998 67899


Q ss_pred             EEEeCCCeEEEEECCCcceeeeccc---CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHG---HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---  154 (320)
                      ++++.|+.|++||+.+ ..+..+..   |...+.++++++  +++.|++++.|+.|++||++ +..+..+.+|...+   
T Consensus       135 ~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~  210 (383)
T 3ei3_B          135 FVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV--SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHA  210 (383)
T ss_dssp             EEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET--TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEE
T ss_pred             EEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC--CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEE
Confidence            9999999999999986 44444433   347788888865  57899999999999999994 55665555443221   


Q ss_pred             -------------cCCCeEEEEECcC----CeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        155 -------------TDDKLVNIWDMRT----GYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       155 -------------~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                                   +.|+.|++||+++    +.++..+ +|...|.+++|+| ++.+|++++.|+.|++||+++++....+
T Consensus       211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  289 (383)
T 3ei3_B          211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI  289 (383)
T ss_dssp             EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred             EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence                         3588999999988    5566655 6999999999999 9999999999999999999876654433


Q ss_pred             ecCcce---------------eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec--CCCceeEEEECcCCCeE
Q psy14961        217 KKDSIL---------------FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG--HENRVSCLQVSPDGTAF  279 (320)
Q Consensus       217 ~~~~~~---------------~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~--h~~~i~~i~~s~~~~~l  279 (320)
                      ..+...               .....+.|+|++++  +|+.|+.|++||+.++..+..+.+  |...+..++|+|++++|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l  367 (383)
T 3ei3_B          290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVL  367 (383)
T ss_dssp             EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEE
T ss_pred             ccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEE
Confidence            321100               11233566677766  777899999999999988888876  56788888999999999


Q ss_pred             EEecCCCceEeeecch
Q psy14961        280 SSGSWDTTLRDEESKN  295 (320)
Q Consensus       280 ~s~s~D~~ir~~~~~~  295 (320)
                      ++|+ |++|++|+..+
T Consensus       368 ~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          368 ASGM-GFNILIWNRED  382 (383)
T ss_dssp             EEEE-TTEEEEEECC-
T ss_pred             EEec-CCcEEEEecCC
Confidence            9997 99999999764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.9e-37  Score=270.64  Aligned_cols=245  Identities=36%  Similarity=0.734  Sum_probs=210.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+|||..+++....+..|...|.+++|+|++++|++|+.|+.+++|++............+.+|...|.++.|.+++ .+
T Consensus        79 v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l  157 (340)
T 1got_B           79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QI  157 (340)
T ss_dssp             EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EE
T ss_pred             EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cE
Confidence            57999999998888888999999999999999999999999999999864332223345677899999999998755 69


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------  154 (320)
                      ++++.|++|++||+++++.+..+.+|.+.|.+++++|  ++.+|++|+.|+.|++||++++.++..+.+|...+      
T Consensus       158 ~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~  235 (340)
T 1got_B          158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP--DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF  235 (340)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred             EEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC--CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence            9999999999999999999999999999999988855  68899999999999999999999888887765432      


Q ss_pred             ---------cCCCeEEEEECcCCeeeeeecC--CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        155 ---------TDDKLVNIWDMRTGYCVQSFEG--HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       155 ---------~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                               +.|+.|++||+++++.+..+..  +...|.+++|+|+|++|++|+.|+.|++||+.+++.+..+..+..  
T Consensus       236 p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~--  313 (340)
T 1got_B          236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN--  313 (340)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--
T ss_pred             CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC--
Confidence                     3589999999999887766642  345799999999999999999999999999998887766655443  


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      .+.+++|+|+|.+|++|+.|++|++||
T Consensus       314 ~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          314 RVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            467899999999999999999999997

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=6.1e-38  Score=280.73  Aligned_cols=287  Identities=14%  Similarity=0.187  Sum_probs=230.4

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      +++||..+.+....+..+ ..+....|++++++|++|+.||.|++|++..    ......+..|...|.++.|++++++|
T Consensus        80 v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l  154 (420)
T 3vl1_A           80 DFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF----NLQREIDQAHVSEITKLKFFPSGEAL  154 (420)
T ss_dssp             EEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS----CEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred             EEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC----cceeeecccccCccEEEEECCCCCEE
Confidence            468998877655443333 4555667899999999999999999998752    23344556899999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc--------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN--------  152 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~--------  152 (320)
                      ++|+.|+.|++||+.+++.+..+.+|...|.+++++|  +++.|++++.|+.|++||+++++.+..+..+..        
T Consensus       155 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~  232 (420)
T 3vl1_A          155 ISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID--RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI  232 (420)
T ss_dssp             EEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE
T ss_pred             EEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC--CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE
Confidence            9999999999999999999899999999999998865  578999999999999999999988887764210        


Q ss_pred             -------------------------------cccCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCC-EEEEeeCC
Q psy14961        153 -------------------------------LITDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGD-AVATGSDD  199 (320)
Q Consensus       153 -------------------------------~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~-~l~s~s~d  199 (320)
                                                     ....++.|++||+++++....+. +|...|.+++|+|++. +|++++.|
T Consensus       233 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d  312 (420)
T 3vl1_A          233 ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN  312 (420)
T ss_dssp             EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred             EEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence                                           01357899999999988776664 5888999999999998 99999999


Q ss_pred             CeEEEEECCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC---------eEEEEeecCCCceeE
Q psy14961        200 ATCRLFDLRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC---------CRVNHLMGHENRVSC  269 (320)
Q Consensus       200 g~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~---------~~~~~~~~h~~~i~~  269 (320)
                      |.|++||+++++. +..+..+.. ..+..+ +.+++.+|++|+.|+.|++||+...         .....+.+|...|.+
T Consensus       313 g~i~vwd~~~~~~~~~~~~~~~~-~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  390 (420)
T 3vl1_A          313 GMLAQWDLRSPECPVGEFLINEG-TPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQ  390 (420)
T ss_dssp             SEEEEEETTCTTSCSEEEEESTT-SCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCE
T ss_pred             CeEEEEEcCCCcCchhhhhccCC-CCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEE
Confidence            9999999988643 444433211 123444 5568899999999999999996652         112335688999999


Q ss_pred             EEECcCCC---eEEEecCCCceEeeecchH
Q psy14961        270 LQVSPDGT---AFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       270 i~~s~~~~---~l~s~s~D~~ir~~~~~~~  296 (320)
                      ++|+|+++   .|++++.++.+++|+.+++
T Consensus       391 ~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~  420 (420)
T 3vl1_A          391 FCYVSDDESNGEVLEVGKNNFCALYNLSNP  420 (420)
T ss_dssp             EEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred             EEEccCCCCcceEEEEcCCceEEEEeccCC
Confidence            99999999   6777788899999998753

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=5.2e-37  Score=269.45  Aligned_cols=249  Identities=21%  Similarity=0.325  Sum_probs=208.2

Q ss_pred             EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         12 EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        12 ~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      ...+..|...|++++|+|++++|++|+.||.|++||...    ......+..|...|.++.|++++..+++|+.|+.+++
T Consensus        57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~----~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v  132 (354)
T 2pbi_B           57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV  132 (354)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred             EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC----CCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence            345667999999999999999999999999999999742    2233455678888999999999999999999999999


Q ss_pred             EECCCc------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEEC
Q psy14961         92 WDVESS------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDM  165 (320)
Q Consensus        92 wd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~  165 (320)
                      |++...      .....+..|...+.++.|.+  ++..|++++.|+.|++||+++++++.                    
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~D~~v~lwd~~~~~~~~--------------------  190 (354)
T 2pbi_B          133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTN--SDMQILTASGDGTCALWDVESGQLLQ--------------------  190 (354)
T ss_dssp             EECCCCTTCCSGGGCEEEEECSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCEEE--------------------
T ss_pred             EEEeccccccccccceeeeccCCcEEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCeEEE--------------------
Confidence            998543      23455677999999888854  57899999999999999988765443                    


Q ss_pred             cCCeeeeeecCCCCCeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        166 RTGYCVQSFEGHQSDVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       166 ~~~~~~~~~~~~~~~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                             .+.+|...|.+++|+|  +|++|++|+.||+|++||+++++.+..+..+..  .+.+++|+|++.+|++|+.|
T Consensus       191 -------~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D  261 (354)
T 2pbi_B          191 -------SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES--DVNSVRYYPSGDAFASGSDD  261 (354)
T ss_dssp             -------EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred             -------EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC--CeEEEEEeCCCCEEEEEeCC
Confidence                   3456888899999988  468999999999999999999887766654432  46789999999999999999


Q ss_pred             CeEEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        244 YTINVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       244 g~v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++|++||+.....+..+..+  ...+.+++|+|++++|++|+.|++|++|+..+
T Consensus       262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~  315 (354)
T 2pbi_B          262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK  315 (354)
T ss_dssp             SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence            99999999887766655543  45789999999999999999999999999743

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-36  Score=261.11  Aligned_cols=269  Identities=18%  Similarity=0.270  Sum_probs=224.7

Q ss_pred             eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         10 TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        10 ~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      +....+..|...|.+++| |++++|++|+.||.|++|++..    ......+..|...|.++.|+++++.+++++.||.|
T Consensus         9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i   83 (313)
T 3odt_A            9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD----QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI   83 (313)
T ss_dssp             EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS----SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC----CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence            344556788999999999 9999999999999999999842    23344567789999999999999999999999999


Q ss_pred             EEEECCCc---ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc-------------
Q psy14961         90 ALWDVESS---QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-------------  153 (320)
Q Consensus        90 ~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~-------------  153 (320)
                      ++|++...   +.+..+..|...+.++.+    +++.+++++.|+.|++||  .+.....+..|...             
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~  157 (313)
T 3odt_A           84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK  157 (313)
T ss_dssp             EEEETTCCTTSCC-CEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred             EEEEeeecCCCCcccchhhcccCEEEEEe----cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence            99998654   556777889999988877    367999999999999999  44454444433322             


Q ss_pred             ---ccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961        154 ---ITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD  229 (320)
Q Consensus       154 ---~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  229 (320)
                         ...++.+++||  .......+.. |...|.+++|+|++. +++++.||.|++||+++++.+..+..+..  .+.+++
T Consensus       158 l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~  232 (313)
T 3odt_A          158 FLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES--FVYCIK  232 (313)
T ss_dssp             EEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEE
T ss_pred             EEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc--eEEEEE
Confidence               13588999999  4556666766 889999999999988 99999999999999999888777664432  467899


Q ss_pred             EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      |+|++ .|++|+.||.|++||..++..+..+..|..+|.+++|+|+++ |++++.|+.|++|+.++.
T Consensus       233 ~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~  297 (313)
T 3odt_A          233 LLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS  297 (313)
T ss_dssp             ECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred             EecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence            99999 588999999999999999999999999999999999999998 667999999999997554

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=271.96  Aligned_cols=232  Identities=17%  Similarity=0.222  Sum_probs=189.2

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      +...|.+++|+|++ .|++|+.||.|++||+...+........+.+|...|.++.|++++++|++|+.|++|++||++++
T Consensus        81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~  159 (344)
T 4gqb_B           81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ  159 (344)
T ss_dssp             ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence            45679999999986 68899999999999996543322233345689999999999999999999999999999999999


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---------------Cc-cc--cCCCe
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---------------HN-LI--TDDKL  159 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---------------~~-~~--~~d~~  159 (320)
                      +++..+.+|...|.++++.+.. ...|++++.|+.|++||+++++....+..+               .. ++  ..|+.
T Consensus       160 ~~~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~  238 (344)
T 4gqb_B          160 VVLSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT  238 (344)
T ss_dssp             EEEEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred             cEEEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence            9999999999999999886642 257899999999999999988765543211               11 11  36899


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LL  237 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l  237 (320)
                      |++||+++++++.++.+|...|.+++|+|++ ++|++|+.|++|++||+++++.... ..+.  -.+.+++|+|++. +|
T Consensus       239 v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~~H~--~~V~~v~~sp~~~~ll  315 (344)
T 4gqb_B          239 VSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-QAHR--DFVRDATWSPLNHSLL  315 (344)
T ss_dssp             EEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-CCCS--SCEEEEEECSSSTTEE
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-cCCC--CCEEEEEEeCCCCeEE
Confidence            9999999999999999999999999999998 5789999999999999998875433 3222  2468899999986 67


Q ss_pred             EEEeCCCeEEEEcCCCC
Q psy14961        238 FAGYNDYTINVWDSLKC  254 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~  254 (320)
                      ++|+.|++|++|++.+.
T Consensus       316 as~s~D~~v~~w~v~~~  332 (344)
T 4gqb_B          316 TTVGWDHQVVHHVVPTE  332 (344)
T ss_dssp             EEEETTSCEEEEECCC-
T ss_pred             EEEcCCCeEEEEECCCC
Confidence            79999999999997653

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.9e-38  Score=286.19  Aligned_cols=274  Identities=18%  Similarity=0.187  Sum_probs=205.7

Q ss_pred             EeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEE
Q psy14961         16 TMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWD   93 (320)
Q Consensus        16 ~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd   93 (320)
                      ..+...|++++|+| ++++||+|+.||.|+|||+...+.  .....+.+|.+.|.++.|+| ++.+|++|+.||+|++||
T Consensus       116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd  193 (435)
T 4e54_B          116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD  193 (435)
T ss_dssp             EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred             CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence            45677899999999 567999999999999999864322  22334568999999999986 678999999999999999


Q ss_pred             CCCcceeeecccC--ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc--------------c--cc
Q psy14961         94 VESSQLLQSFHGH--TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN--------------L--IT  155 (320)
Q Consensus        94 ~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~--------------~--~~  155 (320)
                      ++++........+  ...+.++++  ++++++|++|+.||.|++||++.. .+..+.+|..              +  .+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s  270 (435)
T 4e54_B          194 FKGNILRVFASSDTINIWFCSLDV--SASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATAS  270 (435)
T ss_dssp             TTSCEEEEEECCSSCSCCCCCEEE--ETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred             ccCCceeEEeccCCCCccEEEEEE--CCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEec
Confidence            9876543333333  334555655  456899999999999999998653 2333333221              1  13


Q ss_pred             CCCeEEEEECcCCeeee---eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc----eeeeEEE
Q psy14961        156 DDKLVNIWDMRTGYCVQ---SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI----LFGATSV  228 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~---~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~  228 (320)
                      .|+.|++||+++.....   ...+|...|.+++|+|+|.+|++++.||.|++||+.++........+..    ......+
T Consensus       271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (435)
T 4e54_B          271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA  350 (435)
T ss_dssp             TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred             CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence            68999999998865443   3367999999999999999999999999999999988765444322211    1112345


Q ss_pred             EEecCCcEEEEEe------------CCCeEEEEcCCCCeEEEEee-cCCCceeEE-EECcCCCeEEEecCCCceEeeecc
Q psy14961        229 DFSVSGRLLFAGY------------NDYTINVWDSLKCCRVNHLM-GHENRVSCL-QVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       229 ~~s~~~~~l~~g~------------~dg~v~~wd~~~~~~~~~~~-~h~~~i~~i-~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .|+|++.++++++            .++.|++||..++..+..+. +|...|.++ +|+|+|++||+|+ |++|++|+.+
T Consensus       351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~  429 (435)
T 4e54_B          351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ  429 (435)
T ss_dssp             EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred             EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence            5777777766664            23579999999888877764 788889887 6999999999987 7899999975


Q ss_pred             h
Q psy14961        295 N  295 (320)
Q Consensus       295 ~  295 (320)
                      +
T Consensus       430 ~  430 (435)
T 4e54_B          430 E  430 (435)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.2e-39  Score=293.33  Aligned_cols=289  Identities=11%  Similarity=0.089  Sum_probs=209.9

Q ss_pred             CeEeecccceeE----EEEEeCccceEEEEEcCC------CCEEEEecCCCeEEEEEecccCCc-------ccccccccc
Q psy14961          1 MIIWDGLTQTKE----HSVTMPATWVMACAYAPS------GSVVASGGLDNKVTVYAIALEDDS-------SAKKKTVAT   63 (320)
Q Consensus         1 ~~~W~~~~~~~~----~~~~~~~~~V~~~~~~~~------~~~l~s~~~dg~i~v~~~~~~~~~-------~~~~~~~~~   63 (320)
                      |+|||..+++..    ..+..|...|.+++|+|+      +.+||+|+.||+|++|++......       ......+.+
T Consensus       185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~  264 (524)
T 2j04_B          185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL  264 (524)
T ss_dssp             EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred             EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence            469998776532    223456678999999997      579999999999999998643211       011225668


Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCC
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTG  141 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~  141 (320)
                      |...|.++.|+++ ..|++|+.||+|++||++++ .+...+.+|...|.++++..++++ .+|++++.|+.|++||++++
T Consensus       265 h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~  343 (524)
T 2j04_B          265 ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI  343 (524)
T ss_dssp             TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH
T ss_pred             CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC
Confidence            8999999999875 58999999999999999876 445567889999999865556666 89999999999999999876


Q ss_pred             cEEEEeccCC---------------ccc--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEE
Q psy14961        142 YCVQSFEGHH---------------NLI--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRL  204 (320)
Q Consensus       142 ~~~~~~~~~~---------------~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~i  204 (320)
                      +++..+.+|.               .++  ..|+.|++||++++.+...+.+|...|.+++|+|+|+.|++|+.||+|++
T Consensus       344 ~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l  423 (524)
T 2j04_B          344 ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLII  423 (524)
T ss_dssp             HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred             CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence            5433332221               111  35788999999999988888999999999999999999999999999999


Q ss_pred             EECCCCeeEeEEecC---cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCCCceeEEEECcCCC---
Q psy14961        205 FDLRADKEVACYKKD---SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHENRVSCLQVSPDGT---  277 (320)
Q Consensus       205 wd~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~~~i~~i~~s~~~~---  277 (320)
                      ||+... .+..+...   .....+.+++|+|++..+. ...+  +.+|+.. ++..+..+.+|..+|.+++|+|++.   
T Consensus       424 wd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~  499 (524)
T 2j04_B          424 TNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGK  499 (524)
T ss_dssp             CBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECCC--CCCCC-------------CCCSCCCEEECCSTTTTT
T ss_pred             EechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccH
Confidence            998643 21111100   0111245788999998552 2222  3333322 3456667889999999999999954   


Q ss_pred             eEEEecCCCceEeeecc
Q psy14961        278 AFSSGSWDTTLRDEESK  294 (320)
Q Consensus       278 ~l~s~s~D~~ir~~~~~  294 (320)
                      .||+|+.||+||+|+..
T Consensus       500 ~lAsg~~~g~vrlw~l~  516 (524)
T 2j04_B          500 CYAFSNSAGLLTLEYLS  516 (524)
T ss_dssp             EEEEECTTSEEEEEECS
T ss_pred             HHHhhccCceEEEEEcc
Confidence            99999999999999964

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=270.96  Aligned_cols=286  Identities=15%  Similarity=0.209  Sum_probs=229.2

Q ss_pred             eecccceeEEEEEeCccceEEEEEcCC---CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          4 WDGLTQTKEHSVTMPATWVMACAYAPS---GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         4 W~~~~~~~~~~~~~~~~~V~~~~~~~~---~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+....+....+..|...|++++|+|+   |++|++|+.||.|++|++....  ......+..|...|.++.|++++++|
T Consensus        24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l  101 (368)
T 3mmy_A           24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTIPKAQQMHTGPVLDVCWSDDGSKV  101 (368)
T ss_dssp             CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--ceeEEEeccccCCEEEEEECcCCCEE
Confidence            333444444455678899999999999   6999999999999999986322  12224567899999999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc-------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-------  153 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~-------  153 (320)
                      ++++.||.|++||+++++.+. +..|...|.++++.++++++.|++++.|+.|++||+++++.+..+..+...       
T Consensus       102 ~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  180 (368)
T 3mmy_A          102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY  180 (368)
T ss_dssp             EEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred             EEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence            999999999999999888765 556999999999987888899999999999999999998877766554422       


Q ss_pred             -----ccCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCE----EEEeeCCCeEEEEECCCCe---eEeEEecC
Q psy14961        154 -----ITDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDA----VATGSDDATCRLFDLRADK---EVACYKKD  219 (320)
Q Consensus       154 -----~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~----l~s~s~dg~i~iwd~~~~~---~~~~~~~~  219 (320)
                           ...++.+.+|+++........  ..+...+.++++.++...    +++++.||.|++||++...   ....+..+
T Consensus       181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  260 (368)
T 3mmy_A          181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH  260 (368)
T ss_dssp             TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred             CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeee
Confidence                 245788999999876433222  234456677777665544    9999999999999998763   23333332


Q ss_pred             cce----------eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        220 SIL----------FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       220 ~~~----------~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      ...          ..+.+++|+|++++|++|+.||.|++||+.++..+..+.+|..+|++++|+|+|++|++||.|+..+
T Consensus       261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~  340 (368)
T 3mmy_A          261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSK  340 (368)
T ss_dssp             EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred             ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccc
Confidence            210          1368899999999999999999999999999999999999999999999999999999999988766


Q ss_pred             eee
Q psy14961        290 DEE  292 (320)
Q Consensus       290 ~~~  292 (320)
                      .++
T Consensus       341 ~~~  343 (368)
T 3mmy_A          341 GHE  343 (368)
T ss_dssp             CGG
T ss_pred             ccc
Confidence            665

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=3.3e-37  Score=271.18  Aligned_cols=273  Identities=16%  Similarity=0.161  Sum_probs=222.6

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ..|...|.+++|+|++++|++++.|+.|++|++...  .......+..|...|.++.|+++++++++++.||.|++||++
T Consensus         5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT--EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC--cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence            457889999999999999999999999999998532  112445677899999999999999999999999999999998


Q ss_pred             Ccceee--ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE---EEEe-ccCCcc---------------c
Q psy14961         96 SSQLLQ--SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---VQSF-EGHHNL---------------I  154 (320)
Q Consensus        96 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---~~~~-~~~~~~---------------~  154 (320)
                      +++...  .+..|...+.++++.+  +++.|++++.|+.|++||+..+..   ...+ .+|...               .
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  160 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAP--NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG  160 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECT--TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred             CCeeeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence            876443  3466888998888854  688999999999999999987652   2222 222211               1


Q ss_pred             cCCCeEEEEEC------------------cCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        155 TDDKLVNIWDM------------------RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       155 ~~d~~i~iwd~------------------~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                      ..|+.+++||+                  ..+.++..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus       161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  240 (372)
T 1k8k_C          161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL  240 (372)
T ss_dssp             ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred             cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence            35889999995                  367788888899999999999999999999999999999999988877766


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC--Ce--------------------------------EE-----
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK--CC--------------------------------RV-----  257 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~--~~--------------------------------~~-----  257 (320)
                      ..+..  .+.+++|+|++.+|++| .|+.|++|+...  +.                                ..     
T Consensus       241 ~~~~~--~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (372)
T 1k8k_C          241 ASETL--PLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA  317 (372)
T ss_dssp             ECSSC--CEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred             ccCCC--CeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence            65432  46789999999999888 899999999766  31                                00     


Q ss_pred             -EEe-ecCCCceeEEEEC-cCC---CeEEEecCCCceEeeecch
Q psy14961        258 -NHL-MGHENRVSCLQVS-PDG---TAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       258 -~~~-~~h~~~i~~i~~s-~~~---~~l~s~s~D~~ir~~~~~~  295 (320)
                       ..+ .+|.++|++++|+ ++|   ++|+|||.|++|++|+...
T Consensus       318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~  361 (372)
T 1k8k_C          318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  361 (372)
T ss_dssp             -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence             223 3899999999966 577   9999999999999999754

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.5e-37  Score=264.90  Aligned_cols=243  Identities=20%  Similarity=0.327  Sum_probs=211.2

Q ss_pred             CeEeecccceeE--EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKE--HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~--~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+|||..+.+..  ..+..|...|.+++|++++.++++++.|+.|++||+..    ......+..|...+.++.|+++++
T Consensus        60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~----~~~~~~~~~~~~~~~~~~~spdg~  135 (321)
T 3ow8_A           60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN----GKQIKSIDAGPVDAWTLAFSPDSQ  135 (321)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCTTCCCCEEECTTSS
T ss_pred             EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CCEEEEEeCCCccEEEEEECCCCC
Confidence            479998766543  34567888999999999999999999999999999853    233445667778889999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI----  154 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~----  154 (320)
                      +|++|+.||.|++|++++++....+..|...+.++++.  |++++|++|+.|+.|++||+++++.+..+.+|...+    
T Consensus       136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s--pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~  213 (321)
T 3ow8_A          136 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS--PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT  213 (321)
T ss_dssp             EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE
T ss_pred             EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC--CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE
Confidence            99999999999999999998888888888889888775  578999999999999999999999888887765432    


Q ss_pred             -----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        155 -----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       155 -----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                                 +.|+.|++||++++.+...+.+|...|.+++|+|++.+|++++.|++|++||+++++.+..+..+..  
T Consensus       214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~--  291 (321)
T 3ow8_A          214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD--  291 (321)
T ss_dssp             ECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--
T ss_pred             EcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC--
Confidence                       3588999999999999999999999999999999999999999999999999999888776654432  


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      .+.+++|+|++++|++++.||+|++||.
T Consensus       292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          292 QVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            4678999999999999999999999995

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.3e-36  Score=272.88  Aligned_cols=260  Identities=23%  Similarity=0.391  Sum_probs=216.0

Q ss_pred             CeEeecccceeEEEEE--eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVT--MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~--~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+|||..+++....+.  .|...|++++|+|+|++|++|+.||.|++||+..    ......+.+|...+.++.+.  +.
T Consensus       127 V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~----~~~~~~~~~h~~~v~~~s~~--~~  200 (420)
T 4gga_A          127 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ----QKRLRNMTSHSARVGSLSWN--SY  200 (420)
T ss_dssp             EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEE--TT
T ss_pred             EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC----CcEEEEEeCCCCceEEEeeC--CC
Confidence            5799999988766554  4567899999999999999999999999999852    23455677899999988774  67


Q ss_pred             EEEEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         79 QILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      .+++|+.|+.+++||.... ..+..+.+|...+..+.+.  +++..+++++.|+.+++||...++..             
T Consensus       201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~--~~g~~l~s~~~D~~v~i~~~~~~~~~-------------  265 (420)
T 4gga_A          201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA--PDGRHLASGGNDNLVNVWPSAPGEGG-------------  265 (420)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSCEEEEESSCCSSC-------------
T ss_pred             EEEEEeCCCceeEeeecccceeeEEecccccceeeeeec--CCCCeeeeeeccccceEEeecccccc-------------
Confidence            8999999999999998764 4556788899999887764  46889999999999999998765321             


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEE--eeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVAT--GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                                ...+.....|...|.+++|+|.+. .+++  |+.|++|++||+.+++....+..+.   .+.++.|+|++
T Consensus       266 ----------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~~~~~~~~~  332 (420)
T 4gga_A          266 ----------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHY  332 (420)
T ss_dssp             ----------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEEEEEEETTT
T ss_pred             ----------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---ceeeeeecCCC
Confidence                      112344566888999999999765 4554  4589999999999998877665543   35678899999


Q ss_pred             cEEEEEe--CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        235 RLLFAGY--NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       235 ~~l~~g~--~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ..+++++  .|+.|++||..++.++.++.+|.+.|++|+|+|||++|||||.|++||+|+..
T Consensus       333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~  394 (420)
T 4gga_A          333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF  394 (420)
T ss_dssp             TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred             CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence            9888765  78999999999999999999999999999999999999999999999999964

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=3.5e-37  Score=273.96  Aligned_cols=294  Identities=18%  Similarity=0.240  Sum_probs=229.7

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccccc---------ccccccccCeEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKK---------KTVATHTSFISCC   71 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~---------~~~~~h~~~v~~~   71 (320)
                      ++|+....+.......|...|++++|+| ++++|++|+.||.|++|++..........         .....|...|.++
T Consensus        26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  105 (408)
T 4a11_B           26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV  105 (408)
T ss_dssp             HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE
T ss_pred             eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEE
Confidence            4677777666666667999999999999 99999999999999999986432211110         0113589999999


Q ss_pred             EecC-CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeC-CCCCEEEEEeCCCeEEEEeCCCCcEEEEecc
Q psy14961         72 IFPN-SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS-ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG  149 (320)
Q Consensus        72 ~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~  149 (320)
                      .|.+ ++..+++++.||.|++||+.+++....+. +...+.++.+.+. +++..+++++.|+.|++||++++..+..+..
T Consensus       106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~  184 (408)
T 4a11_B          106 QWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG  184 (408)
T ss_dssp             EECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC
T ss_pred             EEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC
Confidence            9988 67799999999999999999988877765 6777888888764 3556999999999999999998876666654


Q ss_pred             CCcc----------------ccCCCeEEEEECcCCe-eeeee---------------cCCCCCeEEEEEcCCCCEEEEee
Q psy14961        150 HHNL----------------ITDDKLVNIWDMRTGY-CVQSF---------------EGHQSDVNSVKFHPSGDAVATGS  197 (320)
Q Consensus       150 ~~~~----------------~~~d~~i~iwd~~~~~-~~~~~---------------~~~~~~v~~v~~~p~g~~l~s~s  197 (320)
                      |...                ...|+.|++||++++. +...+               .+|...|.+++|+|++++|++++
T Consensus       185 ~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  264 (408)
T 4a11_B          185 HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG  264 (408)
T ss_dssp             CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence            4322                1368899999998765 33333               57888999999999999999999


Q ss_pred             CCCeEEEEECCCCeeEeEEecCcce---eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        198 DDATCRLFDLRADKEVACYKKDSIL---FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       198 ~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      .||.|++||+++++...........   ...........+..+++++.++.|++||..++..+..+.+|...|++++|+|
T Consensus       265 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~  344 (408)
T 4a11_B          265 TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS  344 (408)
T ss_dssp             TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEET
T ss_pred             CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcC
Confidence            9999999999987654332211100   0111112223455677778899999999999999999999999999999999


Q ss_pred             CCCeEEEecCCCceEeeecchH
Q psy14961        275 DGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       275 ~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ++++|++|+.|++|++|+....
T Consensus       345 ~~~~l~s~~~dg~i~iw~~~~~  366 (408)
T 4a11_B          345 NFQELYSGSRDCNILAWVPSLY  366 (408)
T ss_dssp             TTTEEEEEETTSCEEEEEECC-
T ss_pred             CCCEEEEECCCCeEEEEeCCCC
Confidence            9999999999999999997543

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2e-36  Score=273.52  Aligned_cols=279  Identities=23%  Similarity=0.447  Sum_probs=239.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++||..+++....+..|...|.+++|+  +++|++|+.||.|++||+..    ......+..|...|.++.+.  ++.+
T Consensus       141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~--~~~l  212 (445)
T 2ovr_B          141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET----GECIHTLYGHTSTVRCMHLH--EKRV  212 (445)
T ss_dssp             EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEE--TTEE
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc----CcEEEEECCCCCcEEEEEec--CCEE
Confidence            5799999999888888899999999997  56999999999999999853    23445677899999999985  5689


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------  154 (320)
                      ++|+.||.|++||+.+++.+..+.+|...+.++.+    +++.+++++.||.|++||++++.++..+.+|...+      
T Consensus       213 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  288 (445)
T 2ovr_B          213 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD  288 (445)
T ss_dssp             EEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE----CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC
T ss_pred             EEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE----CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC
Confidence            99999999999999999999999999999998876    46899999999999999999998888887665432      


Q ss_pred             -------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-ceeeeE
Q psy14961        155 -------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-ILFGAT  226 (320)
Q Consensus       155 -------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~  226 (320)
                             +.|+.|++||+++++++..+.+|...+.+++++  ++++++++.||.|++||+++++.+..+.... ....+.
T Consensus       289 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~  366 (445)
T 2ovr_B          289 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT  366 (445)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEE
Confidence                   358999999999999999999999999988875  5699999999999999999888776665421 122355


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-----ecCCCceeEEEECcCCCeEEEecCCCc----eEeeecch
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-----MGHENRVSCLQVSPDGTAFSSGSWDTT----LRDEESKN  295 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-----~~h~~~i~~i~~s~~~~~l~s~s~D~~----ir~~~~~~  295 (320)
                      +++|  ++.+|++|+.||.|++||..+++.+..+     .+|.+.|++++|+|++.+|++|+.||+    +.+||...
T Consensus       367 ~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          367 CLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             EEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence            6666  4689999999999999999998888777     478899999999999999999999998    99999653

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.2e-36  Score=284.68  Aligned_cols=283  Identities=16%  Similarity=0.202  Sum_probs=233.0

Q ss_pred             CeEeecccceeEEEEEeCcc---ceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccc-c---ccccCeEEEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPAT---WVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTV-A---THTSFISCCI   72 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~---~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~---~h~~~v~~~~   72 (320)
                      |++||..+.+....+..|..   .|.+++|+|+ +++|++++.|+.|++||+...    .....+ .   .|...|.++.
T Consensus       185 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~v~~~~  260 (615)
T 1pgu_A          185 VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG----EFLKYIEDDQEPVQGGIFALS  260 (615)
T ss_dssp             EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC----CEEEECCBTTBCCCSCEEEEE
T ss_pred             EEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC----CEeEEecccccccCCceEEEE
Confidence            47999999988888777888   8999999999 999999999999999998532    223344 4   7899999999


Q ss_pred             ecCCCCEEEEEeCCCeEEEEECCCcceeeecccC----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         73 FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGH----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        73 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      |+ +++.+++++.|+.|++||+.+++.+..+..+    ...+..+.+.   +++.+++++.|+.|++||+.+++.+..+.
T Consensus       261 ~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~g~i~~~d~~~~~~~~~~~  336 (615)
T 1pgu_A          261 WL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT---GNGRIISLSLDGTLNFYELGHDEVLKTIS  336 (615)
T ss_dssp             ES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE---ETTEEEEEETTSCEEEEETTEEEEEEEEC
T ss_pred             Ec-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC---CCCeEEEEECCCCEEEEECCCCcEEEEEe
Confidence            99 8999999999999999999999888877765    3455555543   57899999999999999987765554443


Q ss_pred             cCCcc---------------------------------------------------------------------------
Q psy14961        149 GHHNL---------------------------------------------------------------------------  153 (320)
Q Consensus       149 ~~~~~---------------------------------------------------------------------------  153 (320)
                      +|...                                                                           
T Consensus       337 ~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~  416 (615)
T 1pgu_A          337 GHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANN  416 (615)
T ss_dssp             CCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECS
T ss_pred             CCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcC
Confidence            32100                                                                           


Q ss_pred             ---------------------------------------------ccC-CCeEEEEECcCCeee-eeecCCCCCeEEEEE
Q psy14961        154 ---------------------------------------------ITD-DKLVNIWDMRTGYCV-QSFEGHQSDVNSVKF  186 (320)
Q Consensus       154 ---------------------------------------------~~~-d~~i~iwd~~~~~~~-~~~~~~~~~v~~v~~  186 (320)
                                                                   ... ++.+++||+.++... ..+.+|...|.+++|
T Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~  496 (615)
T 1pgu_A          417 DGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI  496 (615)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE
T ss_pred             CCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEE
Confidence                                                         011 666777777665544 667789999999999


Q ss_pred             cCCCCEEEEeeCCCeEEEEECCCCeeEeEEec-CcceeeeEEEEEec----------CCcEEEEEeCCCeEEEEcCCCC-
Q psy14961        187 HPSGDAVATGSDDATCRLFDLRADKEVACYKK-DSILFGATSVDFSV----------SGRLLFAGYNDYTINVWDSLKC-  254 (320)
Q Consensus       187 ~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~s~----------~~~~l~~g~~dg~v~~wd~~~~-  254 (320)
                      +|++++|++++.||.|++||+.+++.+..+.. +.  ..+.+++|+|          ++++|++|+.||.|++||+.+. 
T Consensus       497 s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  574 (615)
T 1pgu_A          497 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT--SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM  574 (615)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS--SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred             CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC--CceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence            99999999999999999999999887765443 22  2468899999          9999999999999999999886 


Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ..+..+.+|...|++++|+|+++ |++++.|++|++|+..
T Consensus       575 ~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~  613 (615)
T 1pgu_A          575 KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV  613 (615)
T ss_dssp             CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred             eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence            67788899999999999999999 9999999999999974

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=5.2e-36  Score=271.94  Aligned_cols=271  Identities=19%  Similarity=0.302  Sum_probs=226.4

Q ss_pred             EEEEEeCccce-EEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         12 EHSVTMPATWV-MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        12 ~~~~~~~~~~V-~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      ...+..|...| .++.|  ++++|++|+.||.|++||+..    ......+.+|...|.++.|++++ .+++|+.||+|+
T Consensus       114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~----~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~  186 (464)
T 3v7d_B          114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN----KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR  186 (464)
T ss_dssp             EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred             eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC----CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence            34556676664 54444  567999999999999999742    23455677899999999998776 999999999999


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-----------------------EEEe
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-----------------------VQSF  147 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-----------------------~~~~  147 (320)
                      +||+++++.+..+.+|.+.|.++++.+.++++.+++++.|+.|++||++++..                       +..+
T Consensus       187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (464)
T 3v7d_B          187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL  266 (464)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred             EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence            99999999999999999999999999888889999999999999999987642                       2233


Q ss_pred             ccCCcc-------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961        148 EGHHNL-------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA  214 (320)
Q Consensus       148 ~~~~~~-------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~  214 (320)
                      .+|...             ...|+.|++||+++++++..+.+|...|.+++|+|+++++++|+.||.|++||+++++.+.
T Consensus       267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~  346 (464)
T 3v7d_B          267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY  346 (464)
T ss_dssp             CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred             cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence            333322             1368999999999999999999999999999999999999999999999999999998877


Q ss_pred             EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+..+..  .+..+.|+  +.+|++|+.||.|++||..+....... .|...+..++|+|++++|++|+ |++|++|+.+
T Consensus       347 ~~~~h~~--~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~  420 (464)
T 3v7d_B          347 TLQGHTA--LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR  420 (464)
T ss_dssp             EECCCSS--CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred             EEeCCCC--cEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence            7665443  34566665  689999999999999999887655443 4777889999999999999998 9999999964


Q ss_pred             h
Q psy14961        295 N  295 (320)
Q Consensus       295 ~  295 (320)
                      .
T Consensus       421 ~  421 (464)
T 3v7d_B          421 S  421 (464)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=4.6e-37  Score=266.72  Aligned_cols=266  Identities=17%  Similarity=0.169  Sum_probs=211.5

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCCEEEEEeCCCeEEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQQILTGSGDCTCALWD   93 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd   93 (320)
                      ..|...|++++|+|++++|++|+.||.|++|++............+..|...|.++.|++  ++++|++|+.||.|++||
T Consensus         8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd   87 (351)
T 3f3f_A            8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE   87 (351)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence            468899999999999999999999999999998644333334556678999999999988  589999999999999999


Q ss_pred             CCCc---------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEE
Q psy14961         94 VESS---------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWD  164 (320)
Q Consensus        94 ~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd  164 (320)
                      ++++         +.+..+..|...+.++++.+...+++|++++.|+.|++||+++++.+..+....       .+.   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------~~~---  157 (351)
T 3f3f_A           88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS-------EMK---  157 (351)
T ss_dssp             ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE-------EEE---
T ss_pred             cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc-------ccc---
Confidence            9876         456778889999999988664337899999999999999998876432221000       000   


Q ss_pred             CcCCeeeeeecCCCCCeEEEEEcCC---CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC----cEE
Q psy14961        165 MRTGYCVQSFEGHQSDVNSVKFHPS---GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG----RLL  237 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~v~~v~~~p~---g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~~l  237 (320)
                          .......+|...+.+++|+|+   +..+++++.|+.+.+|+...++.............+.+++|+|++    .+|
T Consensus       158 ----~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l  233 (351)
T 3f3f_A          158 ----VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI  233 (351)
T ss_dssp             ----SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred             ----ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence                000112357788999999997   899999999999988887776543222222222346889999998    899


Q ss_pred             EEEeCCCeEEEEcCCCC----------------------------------------------eEEEEeecCCCceeEEE
Q psy14961        238 FAGYNDYTINVWDSLKC----------------------------------------------CRVNHLMGHENRVSCLQ  271 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~----------------------------------------------~~~~~~~~h~~~i~~i~  271 (320)
                      ++|+.||.|++||+...                                              ..+..+.+|...|++++
T Consensus       234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  313 (351)
T 3f3f_A          234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS  313 (351)
T ss_dssp             EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred             EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence            99999999999997653                                              55667789999999999


Q ss_pred             ECcCCCeEEEecCCCceEeeecch
Q psy14961        272 VSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       272 ~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      |+|++++|++|+.|++|++|+...
T Consensus       314 ~s~~~~~l~s~~~dg~v~iw~~~~  337 (351)
T 3f3f_A          314 WNLTGTILSSAGDDGKVRLWKATY  337 (351)
T ss_dssp             ECSSSCCEEEEETTSCEEEEEECT
T ss_pred             EcCCCCEEEEecCCCcEEEEecCc
Confidence            999999999999999999999754

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2.4e-37  Score=271.05  Aligned_cols=272  Identities=16%  Similarity=0.246  Sum_probs=217.9

Q ss_pred             eCccceEEEEEcCC----CCEEEEecCCCeEEEEEecccCCccccccc--ccccccCeEEEEecCC----CCEEEEEeCC
Q psy14961         17 MPATWVMACAYAPS----GSVVASGGLDNKVTVYAIALEDDSSAKKKT--VATHTSFISCCIFPNS----DQQILTGSGD   86 (320)
Q Consensus        17 ~~~~~V~~~~~~~~----~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~----~~~l~s~~~d   86 (320)
                      .|...|++++|+|+    ...+++++.++.|++|++....... ....  ...|...|.++.|+++    +.+|++|+.|
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d   94 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR-LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR   94 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE-EEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE-eeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence            57889999999984    5567777778899999986332211 1111  1236678999999887    5689999999


Q ss_pred             CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---ccCCccc---------
Q psy14961         87 CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---EGHHNLI---------  154 (320)
Q Consensus        87 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~---~~~~~~~---------  154 (320)
                      |.|++||+.+++.+..+.+|...|.++++.|. +++.|++++.||.|++||+++++.+..+   .+|...+         
T Consensus        95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  173 (366)
T 3k26_A           95 GIIRIINPITMQCIKHYVGHGNAINELKFHPR-DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG  173 (366)
T ss_dssp             CEEEEECTTTCCEEEEEESCCSCEEEEEECSS-CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred             CEEEEEEchhceEeeeecCCCCcEEEEEECCC-CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence            99999999999999999999999999988652 5789999999999999999999888777   4443322         


Q ss_pred             ------cCCCeEEEEECcCCeeeeeec----------------------------CCCCCeEEEEEcCCCCEEEEeeCCC
Q psy14961        155 ------TDDKLVNIWDMRTGYCVQSFE----------------------------GHQSDVNSVKFHPSGDAVATGSDDA  200 (320)
Q Consensus       155 ------~~d~~i~iwd~~~~~~~~~~~----------------------------~~~~~v~~v~~~p~g~~l~s~s~dg  200 (320)
                            ..|+.|++||+++++....+.                            +|...|.+++|+  ++++++++.|+
T Consensus       174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~  251 (366)
T 3k26_A          174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN  251 (366)
T ss_dssp             SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS
T ss_pred             CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC
Confidence                  358899999998876554443                            389999999999  77999999999


Q ss_pred             eEEEEECCCCee--------------EeEEecCcceeeeEEEEEecC--CcEEEEEeCCCeEEEEcCCCCe----EEEEe
Q psy14961        201 TCRLFDLRADKE--------------VACYKKDSILFGATSVDFSVS--GRLLFAGYNDYTINVWDSLKCC----RVNHL  260 (320)
Q Consensus       201 ~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~s~~--~~~l~~g~~dg~v~~wd~~~~~----~~~~~  260 (320)
                      .|++||+++.+.              +..+..+.  ..+..++|+|+  +++|++|+.||.|++||+....    ....+
T Consensus       252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  329 (366)
T 3k26_A          252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ--CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL  329 (366)
T ss_dssp             EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS--CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred             EEEEEeCCCccccccccccCCcchheeccccccC--CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence            999999876543              22222222  13567889999  9999999999999999988754    44467


Q ss_pred             ecC--CCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        261 MGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       261 ~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+|  ...|++++|+|++++|++|+.|++|++|+..
T Consensus       330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            777  7899999999999999999999999999963

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.3e-36  Score=268.58  Aligned_cols=258  Identities=22%  Similarity=0.382  Sum_probs=215.9

Q ss_pred             CeEeecccceeEEEEEe-CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTM-PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~-~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |++||..+++....... |...|.+++|+|++++|++|+.||.|++|++..    ......+..|...|.++.|  ++..
T Consensus       115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~--~~~~  188 (401)
T 4aez_A          115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES----QTKLRTMAGHQARVGCLSW--NRHV  188 (401)
T ss_dssp             EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEE--ETTE
T ss_pred             EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC----CeEEEEecCCCCceEEEEE--CCCE
Confidence            57999999887766655 678999999999999999999999999999853    2334566789999999999  4679


Q ss_pred             EEEEeCCCeEEEEECC-CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         80 ILTGSGDCTCALWDVE-SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      +++|+.||.|++||+. ....+..+..|.+.|.++++++  +++.|++++.|+.|++||++++..+              
T Consensus       189 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~--------------  252 (401)
T 4aez_A          189 LSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS--DGLQLASGGNDNVVQIWDARSSIPK--------------  252 (401)
T ss_dssp             EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTCSSEE--------------
T ss_pred             EEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEccCCCCCcc--------------
Confidence            9999999999999998 4666778889999999988865  6889999999999999998765443              


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR  235 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  235 (320)
                                   ..+.+|...|.+++|+|++. .+++++  .|+.|++||+++++.+..+....   .+.+++|+|++.
T Consensus       253 -------------~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~---~v~~~~~s~~~~  316 (401)
T 4aez_A          253 -------------FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS---QVTSLIWSPHSK  316 (401)
T ss_dssp             -------------EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS---CEEEEEECSSSS
T ss_pred             -------------EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEEECCCCC
Confidence                         33456788899999999765 556654  79999999999988877665443   367899999999


Q ss_pred             EEEE--EeCCCeEEEEcCCCCeE--EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        236 LLFA--GYNDYTINVWDSLKCCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       236 ~l~~--g~~dg~v~~wd~~~~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ++++  |+.||.|++||+.+...  ...+.+|...|.+++|+|++++|++++.|++|++|+....
T Consensus       317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~  381 (401)
T 4aez_A          317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG  381 (401)
T ss_dssp             EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred             eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence            9999  55899999999887543  4456799999999999999999999999999999997543

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=7e-37  Score=308.33  Aligned_cols=289  Identities=24%  Similarity=0.378  Sum_probs=242.7

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~   78 (320)
                      |+|||..+++....+..|...|.+++|+|++++|++++.|+.|++||+..    ......+.+|...|.++.|++  ++.
T Consensus       639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~  714 (1249)
T 3sfz_A          639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT----GKLVHTYDEHSEQVNCCHFTNKSNHL  714 (1249)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred             EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC----CceEEEEcCCCCcEEEEEEecCCCce
Confidence            57999999998888888999999999999999999999999999999853    234456778999999999988  455


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec----------
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE----------  148 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~----------  148 (320)
                      .+++|+.|+.|++||+.+++.+..+.+|.+.|.+++++|  +++.|++++.||.|++||+.++.....+.          
T Consensus       715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~  792 (1249)
T 3sfz_A          715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP--DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSED  792 (1249)
T ss_dssp             EEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS--STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred             EEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec--CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCC
Confidence            889999999999999999999999999999999988855  68899999999999999997765443321          


Q ss_pred             ---------------------------------------------cCCcc---------------ccCCCeEEEEECcCC
Q psy14961        149 ---------------------------------------------GHHNL---------------ITDDKLVNIWDMRTG  168 (320)
Q Consensus       149 ---------------------------------------------~~~~~---------------~~~d~~i~iwd~~~~  168 (320)
                                                                   +|...               ...++.|++||+.++
T Consensus       793 ~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~  872 (1249)
T 3sfz_A          793 PPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR  872 (1249)
T ss_dssp             ---CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT
T ss_pred             ccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC
Confidence                                                         11110               124678999999999


Q ss_pred             eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---------E--------------------eEEecC
Q psy14961        169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE---------V--------------------ACYKKD  219 (320)
Q Consensus       169 ~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~---------~--------------------~~~~~~  219 (320)
                      .+...+.+|...|.+++|+|+|+.+++++.|+.+++||+.....         .                    ......
T Consensus       873 ~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  952 (1249)
T 3sfz_A          873 LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGK  952 (1249)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEES
T ss_pred             ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecC
Confidence            99999999999999999999999999999999999999643100         0                    000000


Q ss_pred             c------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        220 S------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       220 ~------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .      ....+..++|+|+++++++|+.+|.|.+||..++.....+.+|...|++++|+|+|++|++++.|++|++|+.
T Consensus       953 ~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A          953 TGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp             SCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred             cceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence            0      0113578899999999999999999999999988888888999999999999999999999999999999996


Q ss_pred             ch
Q psy14961        294 KN  295 (320)
Q Consensus       294 ~~  295 (320)
                      ..
T Consensus      1033 ~~ 1034 (1249)
T 3sfz_A         1033 QT 1034 (1249)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-37  Score=275.49  Aligned_cols=272  Identities=17%  Similarity=0.300  Sum_probs=223.4

Q ss_pred             cceEEEEEcCCCC-EEEEe----------cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe
Q psy14961         20 TWVMACAYAPSGS-VVASG----------GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT   88 (320)
Q Consensus        20 ~~V~~~~~~~~~~-~l~s~----------~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~   88 (320)
                      ..|.+++|+|+++ +|++|          +.|+.|++|++......  .......|...|.++.|++++++|++|+.||.
T Consensus        13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~   90 (416)
T 2pm9_A           13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIASLQVDSKFNDLDWSHNNKIIAGALDNGS   90 (416)
T ss_dssp             EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred             hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence            4678899999987 99999          88999999998643211  11223358889999999999999999999999


Q ss_pred             EEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc------EEEEe---ccCC----
Q psy14961         89 CALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY------CVQSF---EGHH----  151 (320)
Q Consensus        89 v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~------~~~~~---~~~~----  151 (320)
                      |++||+.+    .+.+..+..|...|.++++.|. ++++|++++.|+.|++||+.++.      ....+   ..|.    
T Consensus        91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~  169 (416)
T 2pm9_A           91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAK-QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI  169 (416)
T ss_dssp             EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS-STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred             EEEeecccccccccchhhccCCccceEEEEEcCC-CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence            99999987    4577888899999999988653 26799999999999999998765      22111   1111    


Q ss_pred             ----------ccc--cCCCeEEEEECcCCeeeeeecCC------CCCeEEEEEcCCC-CEEEEeeCCC---eEEEEECCC
Q psy14961        152 ----------NLI--TDDKLVNIWDMRTGYCVQSFEGH------QSDVNSVKFHPSG-DAVATGSDDA---TCRLFDLRA  209 (320)
Q Consensus       152 ----------~~~--~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~p~g-~~l~s~s~dg---~i~iwd~~~  209 (320)
                                .++  ..++.|++||+++++++..+..|      ...|.+++|+|++ .++++++.|+   .|++||+++
T Consensus       170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~  249 (416)
T 2pm9_A          170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN  249 (416)
T ss_dssp             EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred             EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence                      111  36889999999999998888776      7899999999997 6899999998   999999987


Q ss_pred             C-eeEeEEe-cCcceeeeEEEEEec-CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCC-CeEEEecCC
Q psy14961        210 D-KEVACYK-KDSILFGATSVDFSV-SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG-TAFSSGSWD  285 (320)
Q Consensus       210 ~-~~~~~~~-~~~~~~~~~~~~~s~-~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~-~~l~s~s~D  285 (320)
                      + .....+. .+.  ..+.+++|+| ++.+|++|+.||.|++||+.+...+..+.+|...|.+++|+|++ ++|++++.|
T Consensus       250 ~~~~~~~~~~~~~--~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d  327 (416)
T 2pm9_A          250 ANTPLQTLNQGHQ--KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD  327 (416)
T ss_dssp             TTSCSBCCCSCCS--SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred             CCCCcEEeecCcc--CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence            5 3333333 222  2467899999 99999999999999999999999999999999999999999998 899999999


Q ss_pred             CceEeeecchH
Q psy14961        286 TTLRDEESKNR  296 (320)
Q Consensus       286 ~~ir~~~~~~~  296 (320)
                      ++|++|+....
T Consensus       328 ~~i~iw~~~~~  338 (416)
T 2pm9_A          328 NKIEVQTLQNL  338 (416)
T ss_dssp             SEEEEEESCCC
T ss_pred             CcEEEEEccCC
Confidence            99999997543

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=5.8e-36  Score=280.09  Aligned_cols=284  Identities=18%  Similarity=0.239  Sum_probs=227.7

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCC-
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNS-   76 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~-   76 (320)
                      .+||  +++....+..|...|.+++|+|+++ ++++++.|+.|++||+..    ......+..|..   .|.++.|+++ 
T Consensus       145 ~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~  218 (615)
T 1pgu_A          145 ISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP----FKFSASDRTHHKQGSFVRDVEFSPDS  218 (615)
T ss_dssp             EETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT----BEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred             EEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC----cceeeeecccCCCCceEEEEEECCCC
Confidence            4677  4555666677889999999999998 899999999999999742    234456677888   9999999999 


Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeec-c---cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSF-H---GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      ++++++++.||.|++||+.+++.+..+ .   .|...|.++++.   +++.|++++.|+.|++||+++++.+..+..+..
T Consensus       219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  295 (615)
T 1pgu_A          219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL---DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ  295 (615)
T ss_dssp             CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES---SSSEEEEEETTSEEEEEETTTTEEEEEEECCTT
T ss_pred             CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC
Confidence            999999999999999999999988888 5   899999998886   678999999999999999999988877765520


Q ss_pred             ------------------cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-------------------------
Q psy14961        153 ------------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-------------------------  189 (320)
Q Consensus       153 ------------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-------------------------  189 (320)
                                        ....++.+++||+.+++++..+.+|...|.+++| |+                         
T Consensus       296 ~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~  374 (615)
T 1pgu_A          296 QLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNL  374 (615)
T ss_dssp             CGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSC
T ss_pred             cccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCc
Confidence                              1136889999999988888888777766666665 43                         


Q ss_pred             --------CCEEEEeeCCCeEEEEECCC----------------------------------------------------
Q psy14961        190 --------GDAVATGSDDATCRLFDLRA----------------------------------------------------  209 (320)
Q Consensus       190 --------g~~l~s~s~dg~i~iwd~~~----------------------------------------------------  209 (320)
                              +..+++++.|+.+++||+..                                                    
T Consensus       375 v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  454 (615)
T 1pgu_A          375 IVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSL  454 (615)
T ss_dssp             EEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred             eEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEE
Confidence                    45555666666555555432                                                    


Q ss_pred             ----------------------CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-CCCc
Q psy14961        210 ----------------------DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-HENR  266 (320)
Q Consensus       210 ----------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~  266 (320)
                                            ++... .........+.+++|+|++++|++|+.||.|++||+.+++.+..+.+ |...
T Consensus       455 ~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~  533 (615)
T 1pgu_A          455 SQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSK  533 (615)
T ss_dssp             CSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSC
T ss_pred             cCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCc
Confidence                                  11110 00011112467899999999999999999999999999999988888 9999


Q ss_pred             eeEEEECc----------CCCeEEEecCCCceEeeecchH
Q psy14961        267 VSCLQVSP----------DGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       267 i~~i~~s~----------~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      |++++|+|          ++++|++|+.|++|++|+....
T Consensus       534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  573 (615)
T 1pgu_A          534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP  573 (615)
T ss_dssp             EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred             eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence            99999999          9999999999999999998654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.7e-35  Score=254.63  Aligned_cols=263  Identities=24%  Similarity=0.398  Sum_probs=211.5

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      +++.++||+++ +|++| .|++|+|||+...+  ......+..|...|.++.|+++++++++|+.||+|++||+++++.+
T Consensus        27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~--~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~  102 (318)
T 4ggc_A           27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL  102 (318)
T ss_dssp             TCBCEEECTTS-EEEEE-ETTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             cceEEEECCCC-EEEEE-eCCEEEEEECCCCC--EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence            45779999987 66655 69999999985321  1122234578888999999999999999999999999999999999


Q ss_pred             eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCcc---------------ccCCCeEEEEE
Q psy14961        101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHNL---------------ITDDKLVNIWD  164 (320)
Q Consensus       101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~~---------------~~~d~~i~iwd  164 (320)
                      ..+.+|...+.++..    ++..+++++.++.+++|+...+. .+..+.+|...               ...|+.|++||
T Consensus       103 ~~~~~h~~~~~~~~~----~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd  178 (318)
T 4ggc_A          103 RNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  178 (318)
T ss_dssp             EEEECCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEecCccceEEEeec----CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence            999999888866543    35799999999999999987653 33444444322               13689999999


Q ss_pred             CcCCee----eeeecCCCCCeEEEEEcCCCCE---EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        165 MRTGYC----VQSFEGHQSDVNSVKFHPSGDA---VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       165 ~~~~~~----~~~~~~~~~~v~~v~~~p~g~~---l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      +++++.    ......|...|.+++++|++..   +++++.++.|++||..............   .+..+.|+|++..+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~  255 (318)
T 4ggc_A          179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHYKEL  255 (318)
T ss_dssp             SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS---CEEEEEEETTTTEE
T ss_pred             CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee---eeeeeeecccccce
Confidence            987653    3445668889999999997653   3467789999999998877655444332   35678899999988


Q ss_pred             EEEe--CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        238 FAGY--NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       238 ~~g~--~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ++++  .|+.|++||+.+++++.++.+|.++|++|+|+|||++|||||.|++||+|+..
T Consensus       256 ~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~  314 (318)
T 4ggc_A          256 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF  314 (318)
T ss_dssp             EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence            7764  79999999999999999999999999999999999999999999999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.3e-37  Score=299.60  Aligned_cols=291  Identities=14%  Similarity=0.105  Sum_probs=216.8

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc-------ccccccccCeEEEEe
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK-------KTVATHTSFISCCIF   73 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-------~~~~~h~~~v~~~~~   73 (320)
                      |+|||+.+++....+. +...|++++|+|++++|++|+.||.|++||+..........       ..+.+|.+.|.++.|
T Consensus        81 v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~  159 (902)
T 2oaj_A           81 VYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW  159 (902)
T ss_dssp             EEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred             EEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEE
Confidence            5799999988777665 66789999999999999999999999999985322110000       234678899999999


Q ss_pred             cCC-CCEEEEEeCCCeEEEEECCCcceeeecccC------------------ccceeEEEEeeCCCCCEEEEEeCCCeEE
Q psy14961         74 PNS-DQQILTGSGDCTCALWDVESSQLLQSFHGH------------------TGELMDLDLAPSETGNTFVSGSSDKLVN  134 (320)
Q Consensus        74 ~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~l~s~~~dg~i~  134 (320)
                      +++ +..+++|+.||.| +||+.+++++..+..|                  ...|.+++|+  ++|.+|++++.|+.|+
T Consensus       160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs--pdg~~lasgs~Dg~i~  236 (902)
T 2oaj_A          160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH--PNSLHIITIHEDNSLV  236 (902)
T ss_dssp             ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC--TTSSEEEEEETTCCEE
T ss_pred             ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc--CCCCEEEEEECCCeEE
Confidence            986 4689999999999 9999998888777655                  4678888875  4689999999999999


Q ss_pred             EEeCCCCcEEEE--ec---cC-------------C-----------------c-cc------------------------
Q psy14961        135 IWDMRTGYCVQS--FE---GH-------------H-----------------N-LI------------------------  154 (320)
Q Consensus       135 lwd~~~~~~~~~--~~---~~-------------~-----------------~-~~------------------------  154 (320)
                      +||+++++++..  +.   .|             .                 . ++                        
T Consensus       237 lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~  316 (902)
T 2oaj_A          237 FWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRY  316 (902)
T ss_dssp             EEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCG
T ss_pred             EEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCc
Confidence            999977665431  10   00             0                 0 00                        


Q ss_pred             ------------------------------------------------------cCCCeEEEEECcCCeeeee-------
Q psy14961        155 ------------------------------------------------------TDDKLVNIWDMRTGYCVQS-------  173 (320)
Q Consensus       155 ------------------------------------------------------~~d~~i~iwd~~~~~~~~~-------  173 (320)
                                                                            ..++.+++||+.++.....       
T Consensus       317 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~  396 (902)
T 2oaj_A          317 SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQN  396 (902)
T ss_dssp             GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGG
T ss_pred             cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCc
Confidence                                                                  0134566676655432211       


Q ss_pred             ----------------------------------ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE--eEEe
Q psy14961        174 ----------------------------------FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV--ACYK  217 (320)
Q Consensus       174 ----------------------------------~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~--~~~~  217 (320)
                                                        +.+|...+.+++|+|+++.|++|+.|++|++||+.++...  ..+.
T Consensus       397 l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~  476 (902)
T 2oaj_A          397 LSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFE  476 (902)
T ss_dssp             GTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE
T ss_pred             ccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEE
Confidence                                              1233334444556789999999999999999999876321  0111


Q ss_pred             cC-------cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC------------------------------------
Q psy14961        218 KD-------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC------------------------------------  254 (320)
Q Consensus       218 ~~-------~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~------------------------------------  254 (320)
                      ..       .....+.+++|+|+|++||+|+.||+|++||..+.                                    
T Consensus       477 ~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  556 (902)
T 2oaj_A          477 VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDR  556 (902)
T ss_dssp             EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGG
T ss_pred             eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccccc
Confidence            00       11124789999999999999999999999997543                                    


Q ss_pred             ---------eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        255 ---------CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       255 ---------~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                               .++..+.+|.++|++|+||||| +||+|+.|++||+||.+.+
T Consensus       557 ~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~  606 (902)
T 2oaj_A          557 APTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP  606 (902)
T ss_dssp             CCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred             CCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence                     2356778899999999999999 9999999999999997654

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=5.6e-36  Score=259.45  Aligned_cols=270  Identities=19%  Similarity=0.286  Sum_probs=221.4

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      .++...|.+++|+|||++++++..++.+..|...    ..........|...|.++.|+++++++++++ ||.|++||+.
T Consensus         6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~   80 (337)
T 1gxr_A            6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIP----RHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS   80 (337)
T ss_dssp             EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCC----SEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETT
T ss_pred             cccCCceeEEEECCCCCEEEeecCCCcEeccccC----CccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECC
Confidence            3556788999999999999998877766555321    1122223447999999999999999999998 9999999998


Q ss_pred             Ccceee---ecc--cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc--EEEEeccCCcc---------------
Q psy14961         96 SSQLLQ---SFH--GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY--CVQSFEGHHNL---------------  153 (320)
Q Consensus        96 ~~~~~~---~~~--~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~--~~~~~~~~~~~---------------  153 (320)
                      ++....   .+.  .|...+.++++.|  +++.|++++.|+.|++||+.++.  ....+..+...               
T Consensus        81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  158 (337)
T 1gxr_A           81 HPGNKSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS  158 (337)
T ss_dssp             STTCCSCSEEEECSCTTSBEEEEEECT--TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred             CCCceeeeecccccCCCCcEEEEEEcC--CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEE
Confidence            765332   222  6888898888854  68899999999999999998876  44444433321               


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      ...++.|++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+....   .+..++|+|+
T Consensus       159 ~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---~v~~~~~s~~  235 (337)
T 1gxr_A          159 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS---QIFSLGYCPT  235 (337)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---CEEEEEECTT
T ss_pred             EeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC---ceEEEEECCC
Confidence            1357899999999999999999999999999999999999999999999999999988776665433   3578999999


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +++|++++.++.|++||....... .+..|...|.+++|+|++++|++++.|+.|++|+....
T Consensus       236 ~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~  297 (337)
T 1gxr_A          236 GEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG  297 (337)
T ss_dssp             SSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             CCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence            999999999999999998876554 57889999999999999999999999999999997543

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-36  Score=265.98  Aligned_cols=254  Identities=15%  Similarity=0.174  Sum_probs=208.3

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCA   90 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~   90 (320)
                      ..+..|...|.+++|+|++++|++|+.||.|++|++..  ........+..|...|.++.|+++  +.+|++++.||.|+
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~   82 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG--ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL   82 (379)
T ss_dssp             CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEET--TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred             EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCC--CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence            34567899999999999999999999999999999852  223344567789999999999866  89999999999999


Q ss_pred             EEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCC
Q psy14961         91 LWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG  168 (320)
Q Consensus        91 iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~  168 (320)
                      +||+.+++  .+..+..|...+.++++.|...+..|++++.|+.|++||++.+...                        
T Consensus        83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~------------------------  138 (379)
T 3jrp_A           83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT------------------------  138 (379)
T ss_dssp             EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC------------------------
T ss_pred             EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce------------------------
Confidence            99999886  6677788999999998866533789999999999999999765311                        


Q ss_pred             eeeeeecCCCCCeEEEEEcC-------------CCCEEEEeeCCCeEEEEECCCCeeE----eEEecCcceeeeEEEEEe
Q psy14961        169 YCVQSFEGHQSDVNSVKFHP-------------SGDAVATGSDDATCRLFDLRADKEV----ACYKKDSILFGATSVDFS  231 (320)
Q Consensus       169 ~~~~~~~~~~~~v~~v~~~p-------------~g~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s  231 (320)
                       ....+.+|...|.+++|+|             ++.+|++++.|+.|++||++.+...    ..+..+.  ..+.+++|+
T Consensus       139 -~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~s  215 (379)
T 3jrp_A          139 -SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWS  215 (379)
T ss_dssp             -CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEEC
T ss_pred             -eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc--CcEeEEEEC
Confidence             1223456888999999999             6999999999999999999765432    2222222  246789999


Q ss_pred             cC---CcEEEEEeCCCeEEEEcCCCCe-----EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        232 VS---GRLLFAGYNDYTINVWDSLKCC-----RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       232 ~~---~~~l~~g~~dg~v~~wd~~~~~-----~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      |+   +.+|++|+.||.|++||+....     .+.....|...|++++|+|++++|++++.|+.|++|+...
T Consensus       216 p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          216 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence            99   8999999999999999987642     2223345889999999999999999999999999999753

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=6.6e-37  Score=269.88  Aligned_cols=276  Identities=14%  Similarity=0.142  Sum_probs=203.1

Q ss_pred             ccceEEEEEcCCCCEEEEecCC-------CeEEEEEecccCCccc------ccccccccccCeEEEEecCCCCEEEEE--
Q psy14961         19 ATWVMACAYAPSGSVVASGGLD-------NKVTVYAIALEDDSSA------KKKTVATHTSFISCCIFPNSDQQILTG--   83 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~d-------g~i~v~~~~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~l~s~--   83 (320)
                      ..+|++++|+||+++|++||.+       +.|++|+++.......      ....+..|...+.++.+.  +..+++|  
T Consensus        14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~   91 (365)
T 4h5i_A           14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN   91 (365)
T ss_dssp             SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred             CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence            3579999999999999998754       3599999865432211      112355677778888764  4456554  


Q ss_pred             ---------eCCCeEEEEECCCccee----ee-----cccCccceeEEEEeeCCCCCEEEE--EeCCCeEEEEeCCCCcE
Q psy14961         84 ---------SGDCTCALWDVESSQLL----QS-----FHGHTGELMDLDLAPSETGNTFVS--GSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        84 ---------~~dg~v~iwd~~~~~~~----~~-----~~~~~~~v~~~~~~~~~~~~~l~s--~~~dg~i~lwd~~~~~~  143 (320)
                               +.|+.+++|++.+....    ..     ...+...+..++|  +|||+++++  ++.|+.|++||++++++
T Consensus        92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f--SpDg~~la~as~~~d~~i~iwd~~~~~~  169 (365)
T 4h5i_A           92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI--SREGTVAAIASSKVPAIMRIIDPSDLTE  169 (365)
T ss_dssp             CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE--CTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred             CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE--cCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence                     45788999998654211    11     1123344666666  557888764  45789999999999988


Q ss_pred             EEEeccCCcc-------------ccCCCeEEEEECcCCeeee--eecCCCCCeEEEEEcCCCCEEEEeeCCC----eEEE
Q psy14961        144 VQSFEGHHNL-------------ITDDKLVNIWDMRTGYCVQ--SFEGHQSDVNSVKFHPSGDAVATGSDDA----TCRL  204 (320)
Q Consensus       144 ~~~~~~~~~~-------------~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~v~~~p~g~~l~s~s~dg----~i~i  204 (320)
                      +..+..+..+             ...++.+.+|+..++....  ...+|...|.+++|+|++..+++++.|+    .+++
T Consensus       170 ~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~  249 (365)
T 4h5i_A          170 KFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK  249 (365)
T ss_dssp             EEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred             EEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence            8776533221             1235567788887776553  3466888999999999999999999887    6888


Q ss_pred             EECCCCeeEeE--EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEE
Q psy14961        205 FDLRADKEVAC--YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       205 wd~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s  281 (320)
                      |++........  .........+.+++|+|+|++||+|+.|++|+|||+.+++++.++ .+|..+|++|+|||||++|||
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS  329 (365)
T 4h5i_A          250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS  329 (365)
T ss_dssp             EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred             cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence            99876543221  111111234688999999999999999999999999999988875 689999999999999999999


Q ss_pred             ecCCCceEeeecchHhh
Q psy14961        282 GSWDTTLRDEESKNRYV  298 (320)
Q Consensus       282 ~s~D~~ir~~~~~~~~~  298 (320)
                      ||.|++||+|+....+.
T Consensus       330 ~S~D~tvrvw~ip~~~~  346 (365)
T 4h5i_A          330 VSAANTIHIIKLPLNYA  346 (365)
T ss_dssp             EETTSEEEEEECCTTTT
T ss_pred             EeCCCeEEEEEcCCCCc
Confidence            99999999999855443

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.6e-37  Score=274.24  Aligned_cols=270  Identities=15%  Similarity=0.196  Sum_probs=204.9

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ..+...|++++|+|++++|++|+.|+.|++|++...  .......+.+|...|.++.|++++++|++++.|++|++||+.
T Consensus         8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~   85 (377)
T 3dwl_C            8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN--GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR   85 (377)
T ss_dssp             EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT--EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred             ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC--ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence            345678999999999999999999999999998632  113455677899999999999999999999999999999998


Q ss_pred             Ccc---eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc---EEEEecc-CCccc--------------
Q psy14961         96 SSQ---LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY---CVQSFEG-HHNLI--------------  154 (320)
Q Consensus        96 ~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~---~~~~~~~-~~~~~--------------  154 (320)
                      +++   ....+..|...|.+++++|  +++.|++++.|+.|++||++.+.   ....+.+ |...+              
T Consensus        86 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~  163 (377)
T 3dwl_C           86 PDGTWKQTLVLLRLNRAATFVRWSP--NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA  163 (377)
T ss_dssp             ---CCCCEEECCCCSSCEEEEECCT--TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred             CCCceeeeeEecccCCceEEEEECC--CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence            876   5667778999999888855  68899999999999999998876   2455544 43221              


Q ss_pred             -cCCCeEEEEECc------------------CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---
Q psy14961        155 -TDDKLVNIWDMR------------------TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE---  212 (320)
Q Consensus       155 -~~d~~i~iwd~~------------------~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~---  212 (320)
                       +.|+.|++||++                  .++++..+ +|...|.+++|+|++++|++++.||.|++||+.+++.   
T Consensus       164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~  242 (377)
T 3dwl_C          164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR  242 (377)
T ss_dssp             EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred             EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence             358899999985                  35566667 8999999999999999999999999999999988765   


Q ss_pred             -EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe------------------------------------
Q psy14961        213 -VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC------------------------------------  255 (320)
Q Consensus       213 -~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~------------------------------------  255 (320)
                       +..+..+.  ..+.+++|+|++++|++|+.++.+ +|+.....                                    
T Consensus       243 ~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (377)
T 3dwl_C          243 ALITVKLSQ--LPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA  319 (377)
T ss_dssp             ECCCEECSS--SCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred             eeEeecCCC--CceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence             33333332  236789999999999999877766 66543110                                    


Q ss_pred             ---EEEE-------------eecCCCceeEEEECcCC-C---eEEEecCCCceEeeec
Q psy14961        256 ---RVNH-------------LMGHENRVSCLQVSPDG-T---AFSSGSWDTTLRDEES  293 (320)
Q Consensus       256 ---~~~~-------------~~~h~~~i~~i~~s~~~-~---~l~s~s~D~~ir~~~~  293 (320)
                         ....             ...|.+.|++|++.++. .   .|+|||.||+|++|+.
T Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence               0000             01399999999977643 3   6999999999999984

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=4.8e-37  Score=274.91  Aligned_cols=265  Identities=17%  Similarity=0.314  Sum_probs=216.2

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ  101 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  101 (320)
                      +++++|+|++++|++++.|+.+++|++...    .....+..| ..+.+..+++++++|++|+.||.|++||+.+++...
T Consensus        59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~----~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  133 (420)
T 3vl1_A           59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIR----DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE  133 (420)
T ss_dssp             CTTCEEEEEETTEEEEEETTEEEEEECCSE----ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE
T ss_pred             ccceeeeecCCeEEEEEcCCcEEEEEeccc----ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee
Confidence            447899999999999999999999997532    222333444 455566788999999999999999999999999888


Q ss_pred             ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECc
Q psy14961        102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMR  166 (320)
Q Consensus       102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~  166 (320)
                      .+.+|.+.|.+++++|  +++.|++++.|+.|++||+.+++.+..+.+|...+               +.|+.|++||++
T Consensus       134 ~~~~h~~~v~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  211 (420)
T 3vl1_A          134 IDQAHVSEITKLKFFP--SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG  211 (420)
T ss_dssp             ETTSSSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             ecccccCccEEEEECC--CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence            8889999999998865  68899999999999999999988877776665432               358899999999


Q ss_pred             CCeeeeeecC---CCCCeEEE---------------------EEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961        167 TGYCVQSFEG---HQSDVNSV---------------------KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL  222 (320)
Q Consensus       167 ~~~~~~~~~~---~~~~v~~v---------------------~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~  222 (320)
                      +++++..+..   |...|.++                     +|+|++++|++++.||.|++||+++++......... .
T Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~  290 (420)
T 3vl1_A          212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF-T  290 (420)
T ss_dssp             TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT-S
T ss_pred             CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc-C
Confidence            9998888765   33445554                     457899999999999999999999887765554321 2


Q ss_pred             eeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCCe-EEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        223 FGATSVDFSVSGR-LLFAGYNDYTINVWDSLKCC-RVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       223 ~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~~-~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ..+.+++|+|++. +|++|+.||.|++||+.+.. ++..+.+ |...|+++.| |++++|++++.|++|++|+...
T Consensus       291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~  365 (420)
T 3vl1_A          291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD  365 (420)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred             CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence            2468899999999 99999999999999998764 3566666 6778888865 5788999999999999999755

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=3.1e-35  Score=266.80  Aligned_cols=275  Identities=21%  Similarity=0.358  Sum_probs=228.5

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec--CCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP--NSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~   78 (320)
                      |++||..+++....+..|...|.+++|+|++ +|++|+.||.|++||+..    ......+.+|...|.++.|.  +++.
T Consensus       144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~  218 (464)
T 3v7d_B          144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK----GCCTHVFEGHNSTVRCLDIVEYKNIK  218 (464)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEEESSSCE
T ss_pred             EEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC----CcEEEEECCCCCccEEEEEecCCCCC
Confidence            5799999999988888899999999999988 999999999999999853    23445677899999999986  5678


Q ss_pred             EEEEEeCCCeEEEEECCCcce-----------------------eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEE
Q psy14961         79 QILTGSGDCTCALWDVESSQL-----------------------LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNI  135 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~l  135 (320)
                      .+++|+.||+|++||+.++..                       +..+.+|...+.++.    ++++.+++++.|+.|++
T Consensus       219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~d~~i~v  294 (464)
T 3v7d_B          219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS----GHGNIVVSGSYDNTLIV  294 (464)
T ss_dssp             EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE----EETTEEEEEETTSCEEE
T ss_pred             EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc----CCCCEEEEEeCCCeEEE
Confidence            899999999999999987642                       345667777776653    34789999999999999


Q ss_pred             EeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC
Q psy14961        136 WDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA  200 (320)
Q Consensus       136 wd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg  200 (320)
                      ||+++++++..+.+|...+               +.|+.|++||+++++++..+.+|...|.+++|+  +++|++++.||
T Consensus       295 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg  372 (464)
T 3v7d_B          295 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADG  372 (464)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTS
T ss_pred             EECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCC
Confidence            9999999888887665432               358899999999999999999999999999998  57999999999


Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEE-eecCCCceeEEEECcCCCeE
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH-LMGHENRVSCLQVSPDGTAF  279 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~-~~~h~~~i~~i~~s~~~~~l  279 (320)
                      .|++||+++.+.........   ....+.|+|++.++++|+ ||.|++||..+++.+.. +.+|...|.+++|+ +..++
T Consensus       373 ~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~  447 (464)
T 3v7d_B          373 SIRGWDANDYSRKFSYHHTN---LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLV  447 (464)
T ss_dssp             EEEEEETTTCCEEEEEECTT---CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEE
T ss_pred             cEEEEECCCCceeeeecCCC---CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEE
Confidence            99999999877655544332   235678999999999999 89999999999888875 67889999999997 44556


Q ss_pred             EEecCCCceEee
Q psy14961        280 SSGSWDTTLRDE  291 (320)
Q Consensus       280 ~s~s~D~~ir~~  291 (320)
                      ++++.|+.+.+|
T Consensus       448 ~~~~~~g~~~i~  459 (464)
T 3v7d_B          448 AAVEKDGQSFLE  459 (464)
T ss_dssp             EEEEETTEEEEE
T ss_pred             EEEEeCCeEEEE
Confidence            666677765544

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.4e-36  Score=267.73  Aligned_cols=253  Identities=32%  Similarity=0.640  Sum_probs=206.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEecCC-
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIFPNS-   76 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~-   76 (320)
                      |+|||..+++....+..|..+|.+++|+|++++|++|+.|+.+++|++.....   .......+.+|...+.++.|.++ 
T Consensus        90 v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~  169 (380)
T 3iz6_a           90 LIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ  169 (380)
T ss_dssp             EEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS
T ss_pred             EEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC
Confidence            57999999999888889999999999999999999999999999999853221   11233456789999999999775 


Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeec-----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-CCcEEEEeccC
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSF-----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-TGYCVQSFEGH  150 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-~~~~~~~~~~~  150 (320)
                      +..|++|+.|++|++||+.+++.+..+     .+|...|.++.+.+. +++.|++|+.|+.|++||++ .+..+..+.+|
T Consensus       170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h  248 (380)
T 3iz6_a          170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL-NANMFISGSCDTTVRLWDLRITSRAVRTYHGH  248 (380)
T ss_dssp             SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS-SCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred             CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC-CCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence            457999999999999999999887666     578888988887643 57899999999999999997 44666666666


Q ss_pred             Cccc---------------cCCCeEEEEECcCCeeeeeecCCC-------CCeEEEEEcCCCCEEEEeeCCCeEEEEECC
Q psy14961        151 HNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQ-------SDVNSVKFHPSGDAVATGSDDATCRLFDLR  208 (320)
Q Consensus       151 ~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~-------~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~  208 (320)
                      ...+               +.|+.|++||++++.++..+..+.       ..|.+++|+|+|++|++|+.||.|++||+.
T Consensus       249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~  328 (380)
T 3iz6_a          249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL  328 (380)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred             CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence            5432               368999999999998887775543       248999999999999999999999999998


Q ss_pred             CCeeEeEEec--CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        209 ADKEVACYKK--DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       209 ~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      .++.......  ......+.+++|+|+|.+|++|+.|++|++|++...
T Consensus       329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~  376 (380)
T 3iz6_a          329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH  376 (380)
T ss_dssp             TCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred             CCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence            8776654421  111224678999999999999999999999997654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2.8e-36  Score=265.06  Aligned_cols=238  Identities=15%  Similarity=0.195  Sum_probs=186.5

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      ...|...|.+++|+|++. +++++.||.|++||+...+..........+|...|.++.|++++++|++|+.|++|++||+
T Consensus        90 ~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~  168 (357)
T 4g56_B           90 GVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL  168 (357)
T ss_dssp             EEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred             cCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            345778899999999986 5567789999999986433222222234579999999999999999999999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe--------------ccC-Cc-cc--cC
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF--------------EGH-HN-LI--TD  156 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~--------------~~~-~~-~~--~~  156 (320)
                      ++++++..+.+|...|.++++.+.. ...+++++.|+.|++||+++++....+              .+. .. ++  ..
T Consensus       169 ~~~~~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~  247 (357)
T 4g56_B          169 SQKAVLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE  247 (357)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred             CCCcEEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence            9999999999999999999886643 247899999999999999876543322              111 11 11  46


Q ss_pred             CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec-CC
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV-SG  234 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~  234 (320)
                      |+.|++||+++++++..+.+|...|.+++|+|++ ++|++|+.|++|+|||+++++.+....+..   .+.+++|+| ++
T Consensus       248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~---~V~~vafsP~d~  324 (357)
T 4g56_B          248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRD---FVTGVAWSPLDH  324 (357)
T ss_dssp             SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSS---CEEEEEECSSST
T ss_pred             ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCC---CEEEEEEeCCCC
Confidence            8899999999999999999999999999999987 578999999999999999887765443322   367899998 79


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      .+|++|+.||+|++||+.+..+.
T Consensus       325 ~~l~s~s~Dg~v~iW~~~~~~~~  347 (357)
T 4g56_B          325 SKFTTVGWDHKVLHHHLPSEGRT  347 (357)
T ss_dssp             TEEEEEETTSCEEEEECC-----
T ss_pred             CEEEEEcCCCeEEEEECCCCCcc
Confidence            99999999999999998654333

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.6e-36  Score=261.71  Aligned_cols=269  Identities=15%  Similarity=0.224  Sum_probs=220.2

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC-EEEEEeCCCeEEEEEC-
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSGDCTCALWDV-   94 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~-   94 (320)
                      .|...|.+++|+|++++|++++.|+.|++|++...... .....+..|...|.++.|+++++ .+++|+.||.|++||+ 
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~   87 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN-VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI   87 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence            57789999999999999999999999999998643211 12334558999999999999999 9999999999999999 


Q ss_pred             CCcceeeeccc--CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC---------CcEEEEec-----------cCC-
Q psy14961         95 ESSQLLQSFHG--HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT---------GYCVQSFE-----------GHH-  151 (320)
Q Consensus        95 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~---------~~~~~~~~-----------~~~-  151 (320)
                      ++++. ..+..  |...|.++++.+   ++.|++++.|+.|++||+++         ++++..+.           +.. 
T Consensus        88 ~~~~~-~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  163 (342)
T 1yfq_A           88 GSPSF-QALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             SSSSE-EECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred             cCCce-EeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcE
Confidence            77755 66778  999999998876   67999999999999999876         54332222           111 


Q ss_pred             ccccCCCeEEEEECcC-Ce--eeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCC------eeEeEEecCcc
Q psy14961        152 NLITDDKLVNIWDMRT-GY--CVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRAD------KEVACYKKDSI  221 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~-~~--~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~------~~~~~~~~~~~  221 (320)
                      ...+.++.|++||+++ +.  .......|...|.+++|+| +++++++++.||.+++|+++..      +....+..+..
T Consensus       164 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T 1yfq_A          164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL  243 (342)
T ss_dssp             EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred             EEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence            1124688999999988 54  2334456888999999999 9999999999999999999876      44444444322


Q ss_pred             -------eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-CCceeEEEECcCCCeEEEecCCCc-eEeee
Q psy14961        222 -------LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-ENRVSCLQVSPDGTAFSSGSWDTT-LRDEE  292 (320)
Q Consensus       222 -------~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-~~~i~~i~~s~~~~~l~s~s~D~~-ir~~~  292 (320)
                             ...+.+++|+|++++|++|+.||.|++||..++..+..+.+| ..+|.+++  |++++|++||.|++ .+.++
T Consensus       244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence                   125678999999999999999999999999999999999998 99999999  99999999999998 55555

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-37  Score=280.98  Aligned_cols=235  Identities=13%  Similarity=0.053  Sum_probs=181.1

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC------CCEEEEEeCCCeEEEEECCCcce-------
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS------DQQILTGSGDCTCALWDVESSQL-------   99 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~v~iwd~~~~~~-------   99 (320)
                      .+++++.|+.|+||++............+..|.+.|.++.|+++      ++.|++++.||+|++||+.++..       
T Consensus       175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~  254 (524)
T 2j04_B          175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM  254 (524)
T ss_dssp             -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred             hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence            34446688999999986432211112335567788999999875      57899999999999999976532       


Q ss_pred             ----eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961        100 ----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus       100 ----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                          ...+.+|...|.+++|++  + ..|++|+.||.|++||++++.                          .+...+.
T Consensus       255 ~~~p~~~l~~h~~~v~sv~~s~--~-~~lasgs~DgtV~lWD~~~~~--------------------------~~~~~~~  305 (524)
T 2j04_B          255 CEKPSLTLSLADSLITTFDFLS--P-TTVVCGFKNGFVAEFDLTDPE--------------------------VPSFYDQ  305 (524)
T ss_dssp             CCSCSEEECCTTTCEEEEEESS--S-SEEEEEETTSEEEEEETTBCS--------------------------SCSEEEE
T ss_pred             ecCceEEEEcCCCCEEEEEecC--C-CeEEEEeCCCEEEEEECCCCC--------------------------CceEEee
Confidence                235678889999998864  2 489999999999999997542                          1223456


Q ss_pred             CCCCCeEEE--EEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        176 GHQSDVNSV--KFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       176 ~~~~~v~~v--~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      +|...|.++  +|+|+| .+||||+.|++|+|||+++++....+..+.....+.+++|+|+++.+++++.|++|++||+.
T Consensus       306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~  385 (524)
T 2j04_B          306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR  385 (524)
T ss_dssp             CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred             cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECc
Confidence            799999999  578887 89999999999999999876644333222111124678999999999999999999999998


Q ss_pred             CCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ....+.++.+|.+.|++|+|||+|++|+|||.|++||+|+....
T Consensus       386 ~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~  429 (524)
T 2j04_B          386 AAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR  429 (524)
T ss_dssp             CTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred             ccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence            88777788899999999999999999999999999999996443

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=8.9e-35  Score=262.65  Aligned_cols=266  Identities=27%  Similarity=0.487  Sum_probs=224.0

Q ss_pred             eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961         11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA   90 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~   90 (320)
                      ....+..|...|..+ +++++++|++|+.||.|++||+..    ......+.+|...|.++.|.  ++.+++|+.||+|+
T Consensus       110 ~~~~l~~h~~~v~~~-~~~~g~~l~sg~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~  182 (445)
T 2ovr_B          110 SPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVT----GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLK  182 (445)
T ss_dssp             CCEEEECSTTSCEEE-EEEETTEEEEEETTSCEEEEETTT----CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred             eeEEecccCCCcEEE-EEEcCCEEEEEECCCcEEEEECCC----CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence            334456677765432 566789999999999999999852    23445677899999999996  56999999999999


Q ss_pred             EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-------------cCC
Q psy14961         91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------------TDD  157 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------------~~d  157 (320)
                      +||+.+++.+..+.+|...|.++.+.    ++.+++|+.||.|++||+.+++.+..+.+|...+             +.|
T Consensus       183 vwd~~~~~~~~~~~~h~~~v~~~~~~----~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  258 (445)
T 2ovr_B          183 VWNAETGECIHTLYGHTSTVRCMHLH----EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD  258 (445)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred             EEECCcCcEEEEECCCCCcEEEEEec----CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCC
Confidence            99999999999999999999988773    4689999999999999999998888777665432             368


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      +.|++||+++++++..+.+|...|.+++|  ++.++++++.|+.|++||+++++.+..+..+...  +..  +.+++.++
T Consensus       259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--v~~--~~~~~~~l  332 (445)
T 2ovr_B          259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL--TSG--MELKDNIL  332 (445)
T ss_dssp             SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC--EEE--EEEETTEE
T ss_pred             CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc--EEE--EEEeCCEE
Confidence            99999999999999999999999999999  6889999999999999999998877666544321  233  44568899


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEEeec---CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNHLMG---HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~~~~---h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++|+.||.|++||..++..+..+.+   |..+|.+++|+  +++|++|+.|++|++|+..+
T Consensus       333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~  391 (445)
T 2ovr_B          333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT  391 (445)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred             EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCC
Confidence            9999999999999998888888876   88899999996  57999999999999999654

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.7e-35  Score=265.50  Aligned_cols=269  Identities=17%  Similarity=0.280  Sum_probs=207.1

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC-------cccccccccccc------------cCeEEEEecCCC-
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD-------SSAKKKTVATHT------------SFISCCIFPNSD-   77 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~-------~~~~~~~~~~h~------------~~v~~~~~~~~~-   77 (320)
                      +...|++++|+|+|++|++|+.||.|++|++.....       .......+.+|.            ..|.++.|++++ 
T Consensus        27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~  106 (447)
T 3dw8_B           27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN  106 (447)
T ss_dssp             GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred             ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence            457999999999999999999999999999864321       111344567787            889999999987 


Q ss_pred             -CEEEEEeCCCeEEEEECCCccee---------------------------------------ee-cccCccceeEEEEe
Q psy14961         78 -QQILTGSGDCTCALWDVESSQLL---------------------------------------QS-FHGHTGELMDLDLA  116 (320)
Q Consensus        78 -~~l~s~~~dg~v~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~  116 (320)
                       ..+++++.|++|++||+.++...                                       .. ..+|...|.+++++
T Consensus       107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~  186 (447)
T 3dw8_B          107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN  186 (447)
T ss_dssp             SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred             cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence             78999999999999998764331                                       12 35789999999886


Q ss_pred             eCCCCCEEEEEeCCCeEEEEeCCC-CcEEEE-------eccCCc--------------c--ccCCCeEEEEECcCCee--
Q psy14961        117 PSETGNTFVSGSSDKLVNIWDMRT-GYCVQS-------FEGHHN--------------L--ITDDKLVNIWDMRTGYC--  170 (320)
Q Consensus       117 ~~~~~~~l~s~~~dg~i~lwd~~~-~~~~~~-------~~~~~~--------------~--~~~d~~i~iwd~~~~~~--  170 (320)
                      +  +++.|++| .|+.|++||++. +..+..       +.+|..              +  .+.|+.|++||++++..  
T Consensus       187 ~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  263 (447)
T 3dw8_B          187 S--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD  263 (447)
T ss_dssp             T--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred             C--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence            5  68899998 799999999983 333331       222221              1  13688999999999876  


Q ss_pred             --eeeecCCCC------------CeEEEEEcCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCccee------------
Q psy14961        171 --VQSFEGHQS------------DVNSVKFHPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDSILF------------  223 (320)
Q Consensus       171 --~~~~~~~~~------------~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~------------  223 (320)
                        ...+.+|..            .|.+++|+|+|++|++++. +.|++||++. ++.+..+..+....            
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  342 (447)
T 3dw8_B          264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI  342 (447)
T ss_dssp             TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred             ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence              677888876            8999999999999999998 9999999986 66655554432211            


Q ss_pred             -eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec---------------------------------CCCceeE
Q psy14961        224 -GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG---------------------------------HENRVSC  269 (320)
Q Consensus       224 -~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~---------------------------------h~~~i~~  269 (320)
                       ....++|+|++++|++|+.||.|++||+.+++.+ .+.+                                 +...|.+
T Consensus       343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  421 (447)
T 3dw8_B          343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH  421 (447)
T ss_dssp             GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred             ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence             1234899999999999999999999998877654 2332                                 3457899


Q ss_pred             EEECcCCCeEEEecCCCceEeee
Q psy14961        270 LQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ++|+|++++||+|+.|+ +.+|.
T Consensus       422 ~~~~p~~~~la~~~~~~-~~~~~  443 (447)
T 3dw8_B          422 TAWHPKENIIAVATTNN-LYIFQ  443 (447)
T ss_dssp             EEECSSSSEEEEECSSC-EEEEE
T ss_pred             EEECCCCCEEEEEecce-eeeec
Confidence            99999999999999887 55554

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3e-35  Score=265.16  Aligned_cols=259  Identities=24%  Similarity=0.448  Sum_probs=215.9

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      +...|.++.|  ++++|++|+.||.|++||+..    ......+.+|...|.++.|  +++.+++|+.||+|++||+.++
T Consensus       132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~  203 (435)
T 1p22_A          132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT----LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG  203 (435)
T ss_dssp             SCCCEEEEEC--CSSEEEEEESSSCEEEEESSS----CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred             CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC----CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence            4456777766  789999999999999999752    2334567789999999998  6789999999999999999999


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE---EEeccCCccc-------------cCCCeEE
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV---QSFEGHHNLI-------------TDDKLVN  161 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~---~~~~~~~~~~-------------~~d~~i~  161 (320)
                      +.+..+..|...|.++++.    ++.+++|+.||.|++||+.++...   ..+.+|...+             +.|+.|+
T Consensus       204 ~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~  279 (435)
T 1p22_A          204 EMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK  279 (435)
T ss_dssp             CEEEEECCCCSCEEEEECC----TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred             cEEEEEcCCCCcEEEEEEc----CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEE
Confidence            9999999999999888763    469999999999999999877644   3444443322             4689999


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  241 (320)
                      +||+++++++..+.+|...|.+++++  ++++++|+.||.|++||+++++.+..+..+..  .+.+++|  ++.+|++|+
T Consensus       280 vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~--~~~~l~sg~  353 (435)
T 1p22_A          280 VWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRF--DNKRIVSGA  353 (435)
T ss_dssp             EEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEC--CSSEEEEEE
T ss_pred             EEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC--cEEEEEe--cCCEEEEEe
Confidence            99999999999999999999999995  67999999999999999999888776654433  2456666  889999999


Q ss_pred             CCCeEEEEcCCCCe---------EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        242 NDYTINVWDSLKCC---------RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       242 ~dg~v~~wd~~~~~---------~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .||.|++||.....         .+..+.+|.+.|.+++|  ++++|++|+.|++|++|+..+.
T Consensus       354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~  415 (435)
T 1p22_A          354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND  415 (435)
T ss_dssp             TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred             CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence            99999999975544         67788999999999999  7889999999999999997654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=8.1e-35  Score=250.66  Aligned_cols=236  Identities=27%  Similarity=0.473  Sum_probs=204.2

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ...+.+|...|.++.|++++++|++|+.||.|++|++.+++....+.+|...|.++++.|  ++++|++++.|+.|++||
T Consensus        16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd   93 (312)
T 4ery_A           16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD   93 (312)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEE
T ss_pred             EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC--CCCEEEEECCCCEEEEEE
Confidence            445778999999999999999999999999999999999998888999999999988854  688999999999999999


Q ss_pred             CCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961        138 MRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC  202 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i  202 (320)
                      +++++++..+.+|...+               +.|+.|++||+++++++..+..|..+|.+++|+|++++|++++.||.|
T Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  173 (312)
T 4ery_A           94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC  173 (312)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence            99999888877665432               358899999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCcee---EEEECcCCCeE
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS---CLQVSPDGTAF  279 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~---~i~~s~~~~~l  279 (320)
                      ++||+++++.+..+.... ...+..++|+|++++|++|+.|+.|++||+.+...+..+.+|...+.   .....+++++|
T Consensus       174 ~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  252 (312)
T 4ery_A          174 RIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI  252 (312)
T ss_dssp             EEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEE
T ss_pred             EEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEE
Confidence            999999887665543222 12356789999999999999999999999999998888888876543   33344689999


Q ss_pred             EEecCCCceEeeecchH
Q psy14961        280 SSGSWDTTLRDEESKNR  296 (320)
Q Consensus       280 ~s~s~D~~ir~~~~~~~  296 (320)
                      ++|+.|++|++|+..+.
T Consensus       253 ~sg~~dg~i~vwd~~~~  269 (312)
T 4ery_A          253 VSGSEDNLVYIWNLQTK  269 (312)
T ss_dssp             EECCTTSCEEEEETTTC
T ss_pred             EEECCCCEEEEEECCCc
Confidence            99999999999997543

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-35  Score=254.90  Aligned_cols=250  Identities=18%  Similarity=0.295  Sum_probs=185.2

Q ss_pred             CeEeecccce--eEEEE-Ee-CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEe
Q psy14961          1 MIIWDGLTQT--KEHSV-TM-PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIF   73 (320)
Q Consensus         1 ~~~W~~~~~~--~~~~~-~~-~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~   73 (320)
                      |+|||..++.  ....+ .. |...|.+++|+|++++|++|+.|+.|++|++.....   .......+.+|...|.++.|
T Consensus        36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~  115 (330)
T 2hes_X           36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW  115 (330)
T ss_dssp             EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE
T ss_pred             EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE
Confidence            5799998653  33333 22 788999999999999999999999999999843211   12234457789999999999


Q ss_pred             cCCCCEEEEEeCCCeEEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC--cEEEEe
Q psy14961         74 PNSDQQILTGSGDCTCALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG--YCVQSF  147 (320)
Q Consensus        74 ~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~--~~~~~~  147 (320)
                      ++++++|++|+.|++|++||+..    .+++..+.+|...|.+++|+|  ++.+|++++.|+.|++||...+  .++..+
T Consensus       116 sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~  193 (330)
T 2hes_X          116 SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP--SEALLASSSYDDTVRIWKDYDDDWECVAVL  193 (330)
T ss_dssp             CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS--SSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC--CCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence            99999999999999999999943    245677889999999998865  5789999999999999998766  456666


Q ss_pred             ccCCcc-----------------ccCCCeEEEEECcCC--------eeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCe
Q psy14961        148 EGHHNL-----------------ITDDKLVNIWDMRTG--------YCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDAT  201 (320)
Q Consensus       148 ~~~~~~-----------------~~~d~~i~iwd~~~~--------~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~  201 (320)
                      .+|...                 .+.|+.|++||++.+        .+...+.+ |...|.+++|+|++ .|++++.||.
T Consensus       194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~  272 (330)
T 2hes_X          194 NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV  272 (330)
T ss_dssp             CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC
T ss_pred             cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE
Confidence            555422                 136889999998764        34455555 89999999999765 7999999999


Q ss_pred             EEEEECCCCee--EeEEecCcceeeeEEEEEec--CCcEEEEEeCCCeEEEEcCCC
Q psy14961        202 CRLFDLRADKE--VACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       202 i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      |++||..+++.  ............+..++|+|  ++++|++|+.||+|++||+..
T Consensus       273 v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          273 LAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             EEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            99999887642  21111111112467899999  789999999999999999754

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=5.7e-35  Score=294.40  Aligned_cols=277  Identities=23%  Similarity=0.406  Sum_probs=240.2

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..|...|++++|+|+|++|++|+.||.|++|++..    ......+.+|...|.++.|+++++++++++.||.|++||
T Consensus       610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd  685 (1249)
T 3sfz_A          610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET----GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD  685 (1249)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC----CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            3456888999999999999999999999999999853    234456778999999999999999999999999999999


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCC
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDK  158 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~  158 (320)
                      +.+++.+..+.+|...|.++++.+..++..+++|+.|+.|++||+.++.++..+.+|...+               +.|+
T Consensus       686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg  765 (1249)
T 3sfz_A          686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG  765 (1249)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred             CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence            9999999999999999999999887677899999999999999999999888877765433               3588


Q ss_pred             eEEEEECcCCeeeeeecC-------------CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        159 LVNIWDMRTGYCVQSFEG-------------HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~-------------~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                      .|++||++++.....+..             +...+.+++|+|+|+.+++++ ++.+.+||+.++.......... ...+
T Consensus       766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~-~~~v  843 (1249)
T 3sfz_A          766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGH-HSTI  843 (1249)
T ss_dssp             EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSS-SSCC
T ss_pred             eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCC-CCce
Confidence            999999998877665432             233688999999999999887 6899999999887765554221 2246


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .+++|+|++.++++|+.+|.|++||..++..+..+.+|...|.+++|+|+|++|++++.|++|++|+....
T Consensus       844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~  914 (1249)
T 3sfz_A          844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV  914 (1249)
T ss_dssp             CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccc
Confidence            78999999999999999999999999999999999999999999999999999999999999999997553

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1e-34  Score=251.14  Aligned_cols=246  Identities=23%  Similarity=0.408  Sum_probs=200.8

Q ss_pred             CeEeecccc-----eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          1 MIIWDGLTQ-----TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~~-----~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      |++|+....     .....+..|...|.+++|+|++++|++|+.|++|++||+..    ......+.+|...|.++.|++
T Consensus        42 v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~----~~~~~~~~~h~~~v~~~~~~~  117 (319)
T 3frx_A           42 LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT----GETYQRFVGHKSDVMSVDIDK  117 (319)
T ss_dssp             EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEECT
T ss_pred             EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC----CCeeEEEccCCCcEEEEEEcC
Confidence            479987642     23345667889999999999999999999999999999853    234456788999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCC----CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE----TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      ++..+++|+.|++|++||+. ++.+..+.+|...+.++.+.|..    ++..+++++.|+.|++||++.++....+.+|.
T Consensus       118 ~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~  196 (319)
T 3frx_A          118 KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN  196 (319)
T ss_dssp             TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC
T ss_pred             CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC
Confidence            99999999999999999986 55667788899999999887642    45689999999999999999988877776665


Q ss_pred             ccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961        152 NLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       152 ~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                      ..+               +.|+.|++||+++++++..+..+ .+|.+++|+|++.++++++.+ .+++|++.....+...
T Consensus       197 ~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~  274 (319)
T 3frx_A          197 SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDL  274 (319)
T ss_dssp             SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEE
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeecc
Confidence            432               36899999999999998888754 689999999999999888755 5999999876655443


Q ss_pred             ecCc------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961        217 KKDS------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       217 ~~~~------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      ....      ....+.+++|+|+|++|++|+.||.|++||+.+
T Consensus       275 ~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          275 RPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             CCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred             CccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence            3211      112356899999999999999999999999653

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2.6e-34  Score=277.75  Aligned_cols=274  Identities=19%  Similarity=0.323  Sum_probs=232.5

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ..+..|...|.+++|+|++++|++|+.||.|++||+..    ......+..|...|.++.|+++++.|++++.||.|++|
T Consensus         7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw   82 (814)
T 3mkq_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF   82 (814)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred             eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC----CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            45567889999999999999999999999999999742    23445677899999999999999999999999999999


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-cEEEEeccCCcc----------------cc
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-YCVQSFEGHHNL----------------IT  155 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-~~~~~~~~~~~~----------------~~  155 (320)
                      |+.+++.+..+.+|.+.|.+++|+|  ++..|++++.||.|++||+.++ .....+.+|...                .+
T Consensus        83 ~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  160 (814)
T 3mkq_A           83 NYNTGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC  160 (814)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECS--SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred             ECCCCcEEEEEecCCCCEEEEEEeC--CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence            9999999999999999999988855  6889999999999999999876 444455444322                13


Q ss_pred             CCCeEEEEECcCCeeeeeecCCC-CCeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQ-SDVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV  232 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~  232 (320)
                      .|+.|++||++++.....+..+. ..+.+++|+|  ++.++++++.||.|++||+++++.+..+..+..  .+..++|+|
T Consensus       161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~--~v~~~~~~~  238 (814)
T 3mkq_A          161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHP  238 (814)
T ss_dssp             TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS--CEEEEEECS
T ss_pred             CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcC
Confidence            58899999999888777776555 8899999999  899999999999999999999887766654432  357899999


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCe-EEEecCCCceEeeecc
Q psy14961        233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA-FSSGSWDTTLRDEESK  294 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~-l~s~s~D~~ir~~~~~  294 (320)
                      ++.+|++|+.||.|++||..++..+..+..|...|.+++|+|+++. +++++.|+.+.+|+..
T Consensus       239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (814)
T 3mkq_A          239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG  301 (814)
T ss_dssp             SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence            9999999999999999999998899899999999999999999874 2455556777777753

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=252.07  Aligned_cols=236  Identities=24%  Similarity=0.383  Sum_probs=190.4

Q ss_pred             cccccccccc-CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee---ecccCccceeEEEEeeCCCCCEEEEEeCCCe
Q psy14961         57 KKKTVATHTS-FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ---SFHGHTGELMDLDLAPSETGNTFVSGSSDKL  132 (320)
Q Consensus        57 ~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~  132 (320)
                      ....+.+|.. .|.++.|++++++|++|+.|++|++||++++....   ...+|...|.+++|+|  ++++|++|+.|+.
T Consensus         7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s~s~D~~   84 (345)
T 3fm0_A            7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDAT   84 (345)
T ss_dssp             EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT--TSSEEEEEETTSC
T ss_pred             EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC--CCCEEEEEECCCc
Confidence            3445677876 89999999999999999999999999998765332   2367999999998854  6899999999999


Q ss_pred             EEEEeCCCCc--EEEEeccCCccc---------------cCCCeEEEEECcCC---eeeeeecCCCCCeEEEEEcCCCCE
Q psy14961        133 VNIWDMRTGY--CVQSFEGHHNLI---------------TDDKLVNIWDMRTG---YCVQSFEGHQSDVNSVKFHPSGDA  192 (320)
Q Consensus       133 i~lwd~~~~~--~~~~~~~~~~~~---------------~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~v~~~p~g~~  192 (320)
                      +++||+..+.  ++..+.+|...+               +.|+.|++||++++   .++..+.+|...|.+++|+|++++
T Consensus        85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  164 (345)
T 3fm0_A           85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL  164 (345)
T ss_dssp             EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred             EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence            9999987763  566676665432               35899999999775   456678899999999999999999


Q ss_pred             EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC---------------CeEE
Q psy14961        193 VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK---------------CCRV  257 (320)
Q Consensus       193 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~---------------~~~~  257 (320)
                      |++++.|++|++||.+.++.............+.+++|+|+|++|++|+.|++|++||...               ...+
T Consensus       165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~  244 (345)
T 3fm0_A          165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI  244 (345)
T ss_dssp             EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred             EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence            9999999999999998775432222211123468899999999999999999999998421               1223


Q ss_pred             EEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        258 NHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       258 ~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ..+.+ |...|.+++|+|++..|++++.|++||+|+..
T Consensus       245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~  282 (345)
T 3fm0_A          245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED  282 (345)
T ss_dssp             EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred             EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence            34444 88999999999999999999999999999864

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=6e-34  Score=253.39  Aligned_cols=244  Identities=20%  Similarity=0.399  Sum_probs=196.7

Q ss_pred             CeEeecccceeEEEEEeC------------------ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc
Q psy14961          1 MIIWDGLTQTKEHSVTMP------------------ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA   62 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~------------------~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~   62 (320)
                      ++||+..+++....+..+                  ..+|.+++|+|+|++|++|+.|+.|++||+..    ......+.
T Consensus        87 v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~----~~~~~~~~  162 (393)
T 1erj_A           87 TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN----RKIVMILQ  162 (393)
T ss_dssp             EEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEEC
T ss_pred             EEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCC----CcEEEEEc
Confidence            368999887766554322                  12599999999999999999999999999852    23345677


Q ss_pred             ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      +|...|.++.|+++++.|++++.|++|++||+.+++....+. +...+.+++++|. ++++|++|+.|+.|++||++++.
T Consensus       163 ~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~l~~~s~d~~v~iwd~~~~~  240 (393)
T 1erj_A          163 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG-DGKYIAAGSLDRAVRVWDSETGF  240 (393)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST-TCCEEEEEETTSCEEEEETTTCC
T ss_pred             cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC-CCCEEEEEcCCCcEEEEECCCCc
Confidence            899999999999999999999999999999999988776665 5567877877653 67899999999999999999888


Q ss_pred             EEEEe-------ccCCccc---------------cCCCeEEEEECcCC------------eeeeeecCCCCCeEEEEEcC
Q psy14961        143 CVQSF-------EGHHNLI---------------TDDKLVNIWDMRTG------------YCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       143 ~~~~~-------~~~~~~~---------------~~d~~i~iwd~~~~------------~~~~~~~~~~~~v~~v~~~p  188 (320)
                      .+..+       .+|...+               +.|+.|++||+++.            .+...+.+|...|.+++|+|
T Consensus       241 ~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~  320 (393)
T 1erj_A          241 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ  320 (393)
T ss_dssp             EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG
T ss_pred             EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC
Confidence            76655       2332221               35899999998753            34567789999999999999


Q ss_pred             CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec------CCcEEEEEeCCCeEEEEcCC
Q psy14961        189 SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV------SGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       189 ~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~------~~~~l~~g~~dg~v~~wd~~  252 (320)
                      ++.+|++|+.|+.|++||+.+++.+..+..+..  .+.+++|++      ++.+|++|+.||+|++|+..
T Consensus       321 ~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~--~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~  388 (393)
T 1erj_A          321 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN--SVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  388 (393)
T ss_dssp             GGCEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC--CEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence            999999999999999999999888776655433  356777765      78999999999999999854

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=1.2e-33  Score=248.15  Aligned_cols=278  Identities=12%  Similarity=0.122  Sum_probs=197.0

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE-E
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI-L   81 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~   81 (320)
                      ||...+.+.+.....|...|.+++|+|||++|++|+.++ +++|++...    ...  ...+...+..+.+.++++.+ +
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~   75 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV----AHI--MSQEMRHLSKVRMLHRTNYVAF   75 (355)
T ss_dssp             ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE----EEE--EEEECSCCCEEEECTTSSEEEE
T ss_pred             cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc----cee--eeeecCCeEEEEEcCCCCEEEE
Confidence            566555555555567889999999999999999998765 789997521    111  11222346677777777766 5


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-cEEEEec---------cCC
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-YCVQSFE---------GHH  151 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-~~~~~~~---------~~~  151 (320)
                      +++.|++|++||+.+++++..+. +...|.++.+.+    +.++++ .|+.|++||+.++ +.+..+.         ...
T Consensus        76 ~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~----~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~  149 (355)
T 3vu4_A           76 VTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR----EFIVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGL  149 (355)
T ss_dssp             ECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS----SEEEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTE
T ss_pred             EECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC----CEEEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccE
Confidence            67888999999999999888776 667888877643    345544 4789999999887 3322221         111


Q ss_pred             cc---ccCCCeEEEEECcCCe----------------eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCe-EEEEECCCCe
Q psy14961        152 NL---ITDDKLVNIWDMRTGY----------------CVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT-CRLFDLRADK  211 (320)
Q Consensus       152 ~~---~~~d~~i~iwd~~~~~----------------~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~-i~iwd~~~~~  211 (320)
                      ..   ...++.|++||++++.                ++..+.+|...|.+++|+|+|++|++|+.|++ |++||+++++
T Consensus       150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~  229 (355)
T 3vu4_A          150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV  229 (355)
T ss_dssp             EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred             EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence            11   2468999999998765                26788999999999999999999999999998 9999999998


Q ss_pred             eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE--EEEe---------------------ecCCCcee
Q psy14961        212 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR--VNHL---------------------MGHENRVS  268 (320)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~--~~~~---------------------~~h~~~i~  268 (320)
                      .+..+........+.+++|+|++++|++|+.|++|++||+.....  ...+                     .++..+..
T Consensus       230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (355)
T 3vu4_A          230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC  309 (355)
T ss_dssp             EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred             EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence            887776211123468899999999999999999999999765321  1111                     01122347


Q ss_pred             EEEECcCCCeEEEecCCCceEeeec
Q psy14961        269 CLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       269 ~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .++|+||+++|++++.||.+++|+.
T Consensus       310 ~~a~~~d~~~l~~~~~dg~~~~~~~  334 (355)
T 3vu4_A          310 KIAWISESSLVVVWPHTRMIETFKV  334 (355)
T ss_dssp             EEEESSSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            7999999999999999999999985

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.5e-33  Score=272.44  Aligned_cols=285  Identities=24%  Similarity=0.358  Sum_probs=232.7

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+|||..+++....+..|...|.+++|+|++++|++|+.||.|++|++..    ......+..|...|.++.|+++++.|
T Consensus        37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l  112 (814)
T 3mkq_A           37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT----GEKVVDFEAHPDYIRSIAVHPTKPYV  112 (814)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT----CCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred             EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC----CcEEEEEecCCCCEEEEEEeCCCCEE
Confidence            47999999998888888999999999999999999999999999999853    23345667899999999999999999


Q ss_pred             EEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC--------
Q psy14961         81 LTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH--------  151 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~--------  151 (320)
                      ++++.||.|++||+.++ .....+.+|...+.+++|+|. +++.|++++.||.|++||+..+.....+..+.        
T Consensus       113 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~  191 (814)
T 3mkq_A          113 LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD  191 (814)
T ss_dssp             EEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT-EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEE
T ss_pred             EEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEE
Confidence            99999999999999886 666778889999999988762 46799999999999999998765544433221        


Q ss_pred             -------c---cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc
Q psy14961        152 -------N---LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       152 -------~---~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~  221 (320)
                             .   ....++.|++||++++.+...+.+|...|.+++|+|++.++++++.||.|++||+.+++....+..+..
T Consensus       192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~  271 (814)
T 3mkq_A          192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE  271 (814)
T ss_dssp             ECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSS
T ss_pred             EEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC
Confidence                   0   113578999999999999999999999999999999999999999999999999998877766554432


Q ss_pred             eeeeEEEEEecCCc--EEEEEeCCCeEEEEcCCCCeE----------E--------------------------------
Q psy14961        222 LFGATSVDFSVSGR--LLFAGYNDYTINVWDSLKCCR----------V--------------------------------  257 (320)
Q Consensus       222 ~~~~~~~~~s~~~~--~l~~g~~dg~v~~wd~~~~~~----------~--------------------------------  257 (320)
                        .+..++|+|++.  ++++|+ ++.+.+|+.....+          +                                
T Consensus       272 --~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (814)
T 3mkq_A          272 --RSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQ  348 (814)
T ss_dssp             --SEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCC
T ss_pred             --cEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceee
Confidence              457899999987  466665 55677777543211          1                                


Q ss_pred             -EEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        258 -NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       258 -~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                       ..+..|...+.+++|+|+|++|++++ |+.+++|+..
T Consensus       349 ~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~  385 (814)
T 3mkq_A          349 TKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTAL  385 (814)
T ss_dssp             CEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred             eecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECc
Confidence             11123455689999999999999988 8999999964

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=3e-34  Score=245.76  Aligned_cols=209  Identities=23%  Similarity=0.340  Sum_probs=173.2

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC--cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES--SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      .+.+|...|.++.|++++++|++|+.|++|++||+++  .+++..+.+|.++|.+++|.+..+++.|++|+.|+.|++||
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            3568999999999999999999999999999999974  46778899999999999987544578999999999999999


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCee--E
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKE--V  213 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~--~  213 (320)
                      ++++..                         .++..+.+|...|.+++|+|+  |.+|++++.|++|++||++.+..  .
T Consensus        84 ~~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~  138 (297)
T 2pm7_B           84 EENGRW-------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP  138 (297)
T ss_dssp             BSSSCB-------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred             cCCCce-------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence            876521                         122345678899999999997  88999999999999999986532  1


Q ss_pred             eEEecCcceeeeEEEEEecC-------------CcEEEEEeCCCeEEEEcCCCCe----EEEEeecCCCceeEEEECcCC
Q psy14961        214 ACYKKDSILFGATSVDFSVS-------------GRLLFAGYNDYTINVWDSLKCC----RVNHLMGHENRVSCLQVSPDG  276 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~-------------~~~l~~g~~dg~v~~wd~~~~~----~~~~~~~h~~~i~~i~~s~~~  276 (320)
                      ..+..+.  ..+.+++|+|+             +++|++|+.|++|++||.....    ....+.+|.+.|.+++|+|++
T Consensus       139 ~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~  216 (297)
T 2pm7_B          139 IIIDAHA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV  216 (297)
T ss_dssp             EEEECCS--SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred             eeeeccc--CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence            2222222  24678899997             5799999999999999976543    556788999999999999984


Q ss_pred             ---CeEEEecCCCceEeeecch
Q psy14961        277 ---TAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       277 ---~~l~s~s~D~~ir~~~~~~  295 (320)
                         ++|||||.|++|++|+...
T Consensus       217 ~~~~~las~s~D~~v~iWd~~~  238 (297)
T 2pm7_B          217 LLRSYMASVSQDRTCIIWTQDN  238 (297)
T ss_dssp             SSSEEEEEEETTSCEEEEEESS
T ss_pred             CCceEEEEEECCCcEEEEEeCC
Confidence               8999999999999999754

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=5.1e-34  Score=254.40  Aligned_cols=268  Identities=20%  Similarity=0.275  Sum_probs=213.2

Q ss_pred             EEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCc---
Q psy14961         23 MACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESS---   97 (320)
Q Consensus        23 ~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~---   97 (320)
                      ..++++|+...++ +++.||.|++|++............+.+|...|.++.|++ +++.|++|+.||+|++||+.++   
T Consensus        38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~  117 (402)
T 2aq5_A           38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV  117 (402)
T ss_dssp             CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred             CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence            3477888776444 5788999999998532221123445678999999999999 8899999999999999999887   


Q ss_pred             ----ceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCCcEEEEe--ccCCccc---------------c
Q psy14961         98 ----QLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTGYCVQSF--EGHHNLI---------------T  155 (320)
Q Consensus        98 ----~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~~~~~~~--~~~~~~~---------------~  155 (320)
                          +++..+.+|...|.+++++|  ++ +.|++++.|+.|++||+++++.+..+  ..|...+               +
T Consensus       118 ~~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  195 (402)
T 2aq5_A          118 LPLREPVITLEGHTKRVGIVAWHP--TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC  195 (402)
T ss_dssp             SCBCSCSEEEECCSSCEEEEEECS--SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred             cccCCceEEecCCCCeEEEEEECc--CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence                56778889999999998865  45 69999999999999999999988888  5554332               3


Q ss_pred             CCCeEEEEECcCCeeeeee-cCCCCC-eEEEEEcCCCCEEEEe---eCCCeEEEEECCCCee-EeEEecCcceeeeEEEE
Q psy14961        156 DDKLVNIWDMRTGYCVQSF-EGHQSD-VNSVKFHPSGDAVATG---SDDATCRLFDLRADKE-VACYKKDSILFGATSVD  229 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~v~~~p~g~~l~s~---s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~  229 (320)
                      .|+.|++||+++++++..+ .+|... +.+++|+|++.+|++|   +.|+.|++||++..+. +...... ....+..++
T Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~  274 (402)
T 2aq5_A          196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD-TSSGVLLPF  274 (402)
T ss_dssp             TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC-CCSSCEEEE
T ss_pred             cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc-CCCceeEEE
Confidence            5889999999999999888 788775 8999999999999999   7999999999987654 2222211 112467889


Q ss_pred             EecCCcEEEE-EeCCCeEEEEcCCCCeE-EEEeec--CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        230 FSVSGRLLFA-GYNDYTINVWDSLKCCR-VNHLMG--HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       230 ~s~~~~~l~~-g~~dg~v~~wd~~~~~~-~~~~~~--h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      |+|++++|++ |+.||.|++||+.+..+ +..+..  |..+|.+++|+|++.++++  .|+.+|+|+...
T Consensus       275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~  342 (402)
T 2aq5_A          275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE  342 (402)
T ss_dssp             EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred             EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence            9999999865 55799999999887653 334443  5689999999999998775  567999999754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-34  Score=275.14  Aligned_cols=251  Identities=15%  Similarity=0.182  Sum_probs=206.4

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEEEE
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCALW   92 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iw   92 (320)
                      +..|...|++++|+|++++|++|+.||.|++|++..  ........+.+|...|.++.|+++  ++.+++|+.||.|++|
T Consensus         5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~--~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw   82 (753)
T 3jro_A            5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG--ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW   82 (753)
T ss_dssp             ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET--TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred             cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC--CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence            457889999999999999999999999999999852  223445567789999999999877  8999999999999999


Q ss_pred             ECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         93 DVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        93 d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      |+.+++  .+..+..|...|.+++++|..+++.+++|+.||.|++||++.+...                         .
T Consensus        83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-------------------------~  137 (753)
T 3jro_A           83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-------------------------S  137 (753)
T ss_dssp             EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-------------------------C
T ss_pred             ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-------------------------c
Confidence            998876  6677788999999998876533789999999999999999765211                         1


Q ss_pred             eeeecCCCCCeEEEEEcC-------------CCCEEEEeeCCCeEEEEECCCCee----EeEEecCcceeeeEEEEEecC
Q psy14961        171 VQSFEGHQSDVNSVKFHP-------------SGDAVATGSDDATCRLFDLRADKE----VACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p-------------~g~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      ...+.+|...|.+++|+|             ++..+++|+.||.|++||++++..    ...+..+.  ..+.+++|+|+
T Consensus       138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~--~~V~~l~~sp~  215 (753)
T 3jro_A          138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPT  215 (753)
T ss_dssp             CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCC
T ss_pred             eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC--CcEEEEEeccC
Confidence            223456888999999999             589999999999999999987632    22222222  24688999999


Q ss_pred             ---CcEEEEEeCCCeEEEEcCCCCe-----EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        234 ---GRLLFAGYNDYTINVWDSLKCC-----RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       234 ---~~~l~~g~~dg~v~~wd~~~~~-----~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                         +.+|++|+.||.|++||.....     ......+|...|++++|+|+|++|++|+.|+.|++|+..
T Consensus       216 ~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~  284 (753)
T 3jro_A          216 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (753)
T ss_dssp             CSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred             CCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence               8999999999999999987643     333345688999999999999999999999999999975

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=3e-33  Score=251.80  Aligned_cols=258  Identities=22%  Similarity=0.292  Sum_probs=208.3

Q ss_pred             EEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccC------CcccccccccccccCeEEEEecCCCC-EEEEEeC
Q psy14961         14 SVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALED------DSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSG   85 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~   85 (320)
                      ....|...|++++|+|+ +.+|++++.||.|++|++....      ........+..|...+.++.|++++. .|++|+.
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~  202 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD  202 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence            34457789999999997 6799999999999999986421      01233455678999999999999887 9999999


Q ss_pred             CCeEEEEECCCcce-------eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         86 DCTCALWDVESSQL-------LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        86 dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      ||.|++|++.++..       ...+..|...|.+++++|. ++..|++++.|+.|++||++++.                
T Consensus       203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~s~~~dg~i~i~d~~~~~----------------  265 (430)
T 2xyi_A          203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFGSVADDQKLMIWDTRNNN----------------  265 (430)
T ss_dssp             TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEEEEETTSEEEEEETTCSC----------------
T ss_pred             CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEEEEeCCCeEEEEECCCCC----------------
Confidence            99999999987321       3456689999999998764 46799999999999999998642                


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEecCCc-
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSVSGR-  235 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~-  235 (320)
                              ...++..+..|...|++++|+|++. .+++|+.||.|++||++. ...+..+..+.  ..+.++.|+|++. 
T Consensus       266 --------~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~--~~v~~i~~sp~~~~  335 (430)
T 2xyi_A          266 --------TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK--DEIFQVQWSPHNET  335 (430)
T ss_dssp             --------SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS--SCEEEEEECSSCTT
T ss_pred             --------CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC--CCEEEEEECCCCCC
Confidence                    0123344557889999999999987 688999999999999987 34444444332  2467899999995 


Q ss_pred             EEEEEeCCCeEEEEcCCC--------------CeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecchHhh
Q psy14961        236 LLFAGYNDYTINVWDSLK--------------CCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~--------------~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~~~~~  298 (320)
                      +|++|+.|+.|++||+..              ...+..+.+|...|++++|+|+++ +|++++.|++|++|+..+...
T Consensus       336 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~  413 (430)
T 2xyi_A          336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY  413 (430)
T ss_dssp             EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred             EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence            799999999999999765              256677789999999999999999 899999999999999866544

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-33  Score=273.68  Aligned_cols=189  Identities=13%  Similarity=0.119  Sum_probs=154.5

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ..|...|++++|+|++++||+|+.||.|++|+....    .. .....|...|.++.|++ +++|++++.|++|++||+.
T Consensus        14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~----~~-~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~   87 (902)
T 2oaj_A           14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV----EV-VIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY   87 (902)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC----EE-EEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred             cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc----EE-EEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence            357889999999999999999999999999986421    11 12234778999999999 7899999999999999999


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE-----------EeccCCcc-----------
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ-----------SFEGHHNL-----------  153 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~-----------~~~~~~~~-----------  153 (320)
                      +++++..+. |.+.|.+++++  +++++|++|+.||.|++||++++....           .+.+|...           
T Consensus        88 ~~~~~~~~~-~~~~V~~v~~s--p~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~  164 (902)
T 2oaj_A           88 SQKVLTTVF-VPGKITSIDTD--ASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI  164 (902)
T ss_dssp             TCSEEEEEE-CSSCEEEEECC--TTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred             CCcEEEEEc-CCCCEEEEEEC--CCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence            998888776 66788887774  568999999999999999998876531           11122111           


Q ss_pred             -----ccCCCeEEEEECcCCeeeeeecCC------------------CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961        154 -----ITDDKLVNIWDMRTGYCVQSFEGH------------------QSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       154 -----~~~d~~i~iwd~~~~~~~~~~~~~------------------~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                           ...|+.| +||++++++...+.+|                  ...|.+++|+|+|.+|++++.||+|++||++++
T Consensus       165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g  243 (902)
T 2oaj_A          165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG  243 (902)
T ss_dssp             EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred             CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence                 1368899 9999999988887765                  467999999999999999999999999999887


Q ss_pred             eeEe
Q psy14961        211 KEVA  214 (320)
Q Consensus       211 ~~~~  214 (320)
                      +.+.
T Consensus       244 ~~~~  247 (902)
T 2oaj_A          244 HMIM  247 (902)
T ss_dssp             CEEE
T ss_pred             cEEE
Confidence            6653

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.1e-32  Score=240.66  Aligned_cols=231  Identities=19%  Similarity=0.326  Sum_probs=184.6

Q ss_pred             cccccccccCeEEEEe-----cC-CCCEEEEEeCCCeEEEEECCCc-------ceeeecccCccceeEEEEeeCCCCCEE
Q psy14961         58 KKTVATHTSFISCCIF-----PN-SDQQILTGSGDCTCALWDVESS-------QLLQSFHGHTGELMDLDLAPSETGNTF  124 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~-----~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l  124 (320)
                      ...+.+|...|.++.|     .+ ++++|++|+.|++|++||+.+.       .+...+.+|...|.++++.+  ++.++
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~--~~~~l   91 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ--ENCFA   91 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS--STTEE
T ss_pred             eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC--CCCEE
Confidence            3467899999999998     55 7889999999999999998643       45667889999999988854  68899


Q ss_pred             EEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeee--ecCCCCCeEEEEEc
Q psy14961        125 VSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQS--FEGHQSDVNSVKFH  187 (320)
Q Consensus       125 ~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~v~~~  187 (320)
                      ++++.|+.|++||+++++.+..+.+|...+               +.|+.|++||+........  ..+|...|.+++|+
T Consensus        92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~  171 (343)
T 2xzm_R           92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS  171 (343)
T ss_dssp             EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred             EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence            999999999999999999888887765432               3588999999974332221  23788999999999


Q ss_pred             CCC----------CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-eE
Q psy14961        188 PSG----------DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-CR  256 (320)
Q Consensus       188 p~g----------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~-~~  256 (320)
                      |++          .+|++++.|+.|++||.. .+....+..+..  .+.+++|+|+|++|++|+.||.|++||+... ..
T Consensus       172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~--~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~  248 (343)
T 2xzm_R          172 PIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHES--NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP  248 (343)
T ss_dssp             CCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSS--CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred             cccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccc--cceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence            987          789999999999999954 444444443332  4678999999999999999999999998443 33


Q ss_pred             EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ... ..+...|.+++|+|++++|+ ++.|+.|++|+...
T Consensus       249 ~~~-~~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~  285 (343)
T 2xzm_R          249 QRE-FDAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMT  285 (343)
T ss_dssp             SEE-EECSSCEEEEEECSSSCEEE-EEESSCEEEEESSS
T ss_pred             cee-ecCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCC
Confidence            333 34566799999999998776 55688999999643

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=6.6e-34  Score=249.20  Aligned_cols=246  Identities=18%  Similarity=0.292  Sum_probs=197.9

Q ss_pred             CeEeecccceeEEEEEe-----CccceEEEEEcCC----CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEE
Q psy14961          1 MIIWDGLTQTKEHSVTM-----PATWVMACAYAPS----GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCC   71 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~-----~~~~V~~~~~~~~----~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~   71 (320)
                      |+|||..+++....+..     +...|.+++|+|+    +.+|++|+.||.|++||+..    ......+..|...|.++
T Consensus        46 v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~i~~~  121 (366)
T 3k26_A           46 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT----MQCIKHYVGHGNAINEL  121 (366)
T ss_dssp             EEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT----CCEEEEEESCCSCEEEE
T ss_pred             EEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh----ceEeeeecCCCCcEEEE
Confidence            47999997776544432     4467999999999    67999999999999998752    23345567899999999


Q ss_pred             EecC-CCCEEEEEeCCCeEEEEECCCcceeeec---ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961         72 IFPN-SDQQILTGSGDCTCALWDVESSQLLQSF---HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        72 ~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~  147 (320)
                      .|++ ++..+++++.||.|++||+.+++.+..+   ..|...|.++++++  +++.|++++.||.|++||+++++....+
T Consensus       122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~  199 (366)
T 3k26_A          122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL--LGEKIMSCGMDHSLKLWRINSKRMMNAI  199 (366)
T ss_dssp             EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT--TSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred             EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC--CCCEEEEecCCCCEEEEECCCCcccccc
Confidence            9998 8899999999999999999998888777   68999999988855  6889999999999999999876432211


Q ss_pred             c----------------------------cCCcc-------------ccCCCeEEEEECcCCee--------------ee
Q psy14961        148 E----------------------------GHHNL-------------ITDDKLVNIWDMRTGYC--------------VQ  172 (320)
Q Consensus       148 ~----------------------------~~~~~-------------~~~d~~i~iwd~~~~~~--------------~~  172 (320)
                      .                            .|...             .+.++.|++||++++..              +.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~  279 (366)
T 3k26_A          200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILG  279 (366)
T ss_dssp             HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEE
T ss_pred             ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheec
Confidence            1                            12211             23689999999987644              67


Q ss_pred             eecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeE----eEEecCcceeeeEEEEEecCCcEEEEEeCCCeE
Q psy14961        173 SFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEV----ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTI  246 (320)
Q Consensus       173 ~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v  246 (320)
                      .+.+|...|.+++|+|+  +++|++++.||.|++||+.+++..    ..+..+.....+.+++|+|++++|++|+.||.|
T Consensus       280 ~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i  359 (366)
T 3k26_A          280 RFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASI  359 (366)
T ss_dssp             EEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             cccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEE
Confidence            78889999999999999  999999999999999999886532    233333222357889999999999999999999


Q ss_pred             EEEcCC
Q psy14961        247 NVWDSL  252 (320)
Q Consensus       247 ~~wd~~  252 (320)
                      ++||+.
T Consensus       360 ~iwd~~  365 (366)
T 3k26_A          360 WRWDRL  365 (366)
T ss_dssp             EEEEC-
T ss_pred             EEEEec
Confidence            999974

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=4.1e-32  Score=258.52  Aligned_cols=246  Identities=24%  Similarity=0.418  Sum_probs=199.1

Q ss_pred             CeEeecccce-----eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          1 MIIWDGLTQT-----KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~~~-----~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      |+|||+.+..     ....+..|...|.+++|+|++++|++|+.|+.|++||+..    ......+.+|...|.++.|++
T Consensus       407 i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~----~~~~~~~~~h~~~v~~~~~s~  482 (694)
T 3dm0_A          407 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA----GVSTRRFVGHTKDVLSVAFSL  482 (694)
T ss_dssp             EEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEECT
T ss_pred             EEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC----CcceeEEeCCCCCEEEEEEeC
Confidence            5799987532     3345677899999999999999999999999999999852    233456778999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceee---ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQ---SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      ++..|++|+.|++|++||........   ...+|...|.+++++|......+++++.|+.|++||++++++...+.+|..
T Consensus       483 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~  562 (694)
T 3dm0_A          483 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG  562 (694)
T ss_dssp             TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred             CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence            99999999999999999986543322   224688889999998765457899999999999999999988888877764


Q ss_pred             cc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961        153 LI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK  217 (320)
Q Consensus       153 ~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~  217 (320)
                      .+               +.|+.|++||+++++++..+.. ...|.+++|+|++.++++++ |+.|++||+++++.+..+.
T Consensus       563 ~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~  640 (694)
T 3dm0_A          563 YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLK  640 (694)
T ss_dssp             CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEC
T ss_pred             CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhc
Confidence            33               3589999999999998887764 46799999999998777765 5679999999887665443


Q ss_pred             cCc-----------------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        218 KDS-----------------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       218 ~~~-----------------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      .+.                 ....+.+++|+|+|++|++|+.||.|++||+.
T Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          641 VDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             CCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            211                 01125789999999999999999999999975

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1e-33  Score=251.86  Aligned_cols=260  Identities=12%  Similarity=0.091  Sum_probs=180.4

Q ss_pred             EEcCCCCEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecC--------CCCEEEEEeCCCeEEEEECCC
Q psy14961         26 AYAPSGSVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPN--------SDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~--------~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      .+++++.+|++|+.|++|++||....+.. ......+.+|...|.++.|++        ++++|++|+.|++|+|||+.+
T Consensus        96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~  175 (393)
T 4gq1_A           96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD  175 (393)
T ss_dssp             -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred             ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence            34556778999999999999998643221 123446789999999999976        678999999999999999988


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      +..+..+..|...+.+++|+|. ++.+|++++.|+.|++||+++++.......+..... ...+ -++...........+
T Consensus       176 ~~~~~~~~~~~~~v~~v~~~p~-~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~-~~~~-s~~~~~~~~~~~~~~  252 (393)
T 4gq1_A          176 EGPILAGYPLSSPGISVQFRPS-NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN-PWLL-TLNTLPLVNTCHSSG  252 (393)
T ss_dssp             TEEEEEEEECSSCEEEEEEETT-EEEEEEEEETTSEEEEEETTCCC----------CSC-CCSE-EEESGGGC------C
T ss_pred             CceeeeecCCCCCcEEEEECCC-CCceEEecCCCCEEEEEECCCCcccccccccCCccc-ceEE-ecccccceeeeeccc
Confidence            8887778889999999998764 235899999999999999998876554432221110 1111 111111112223457


Q ss_pred             CCCCeEEEEEc-CCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce----------------eeeEEEEEec--CCcEE
Q psy14961        177 HQSDVNSVKFH-PSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL----------------FGATSVDFSV--SGRLL  237 (320)
Q Consensus       177 ~~~~v~~v~~~-p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~s~--~~~~l  237 (320)
                      |...+.+++|+ |+++.+++++.|+++++||+..++....+..+...                .......++|  ++.++
T Consensus       253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (393)
T 4gq1_A          253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA  332 (393)
T ss_dssp             CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred             ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence            88899999997 79999999999999999999766543222111000                0011223443  45577


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCce
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL  288 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~i  288 (320)
                      ++|+.||.|++||..++.....+.+|..+|.+++|||||++||+|+.||.+
T Consensus       333 ~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~  383 (393)
T 4gq1_A          333 TAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL  383 (393)
T ss_dssp             EEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred             EEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence            888899999999999888888888999999999999999999999988753

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2.8e-32  Score=242.02  Aligned_cols=251  Identities=18%  Similarity=0.233  Sum_probs=205.6

Q ss_pred             CeEeecccce------eEEEEEeCccceEEEEEcCC----C---CEEEEecCCCeEEEEEecccCCccc-cccccccc--
Q psy14961          1 MIIWDGLTQT------KEHSVTMPATWVMACAYAPS----G---SVVASGGLDNKVTVYAIALEDDSSA-KKKTVATH--   64 (320)
Q Consensus         1 ~~~W~~~~~~------~~~~~~~~~~~V~~~~~~~~----~---~~l~s~~~dg~i~v~~~~~~~~~~~-~~~~~~~h--   64 (320)
                      |+|||..+.+      ....+..|...|.+++|+|+    +   ++|++++.|+.|++|++........ ....+..|  
T Consensus        38 i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~  117 (397)
T 1sq9_A           38 LKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS  117 (397)
T ss_dssp             EEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCT
T ss_pred             EEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeeccccc
Confidence            5799999877      56677788999999999999    9   9999999999999999864332110 13455667  


Q ss_pred             ---ccCeEEEEec----CCCCE-EEEEeCCCeEEEEECCC------cceee-----ec-------ccCccceeEEEEeeC
Q psy14961         65 ---TSFISCCIFP----NSDQQ-ILTGSGDCTCALWDVES------SQLLQ-----SF-------HGHTGELMDLDLAPS  118 (320)
Q Consensus        65 ---~~~v~~~~~~----~~~~~-l~s~~~dg~v~iwd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~  118 (320)
                         ...|.++.|+    ++++. +++++.||.|++||+.+      ++.+.     .+       ..|...+.++++.+ 
T Consensus       118 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  196 (397)
T 1sq9_A          118 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-  196 (397)
T ss_dssp             TGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-
T ss_pred             ccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-
Confidence               5899999999    99999 99999999999999988      66655     66       34788898888855 


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCcEEEEecc---C---Cccc---------------cCC---CeEEEEECcCCeeeeee
Q psy14961        119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG---H---HNLI---------------TDD---KLVNIWDMRTGYCVQSF  174 (320)
Q Consensus       119 ~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~---~---~~~~---------------~~d---~~i~iwd~~~~~~~~~~  174 (320)
                       ++ .|++++.|+.|++||+++++.+..+..   |   ...+               ..+   +.|++||+++++++..+
T Consensus       197 -~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~  274 (397)
T 1sq9_A          197 -RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL  274 (397)
T ss_dssp             -TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred             -Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence             57 999999999999999999988888876   5   3322               246   89999999999999999


Q ss_pred             cC-------------CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe------cCc-------------ce
Q psy14961        175 EG-------------HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK------KDS-------------IL  222 (320)
Q Consensus       175 ~~-------------~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~-------------~~  222 (320)
                      .+             |...|.+++|+|++++|++++.||.|++||+++++.+..+.      .+.             ..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  354 (397)
T 1sq9_A          275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE  354 (397)
T ss_dssp             CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS
T ss_pred             ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC
Confidence            88             99999999999999999999999999999999998887776      320             02


Q ss_pred             eeeEEEEEecCC----------cEEEEEeCCCeEEEEcCCCC
Q psy14961        223 FGATSVDFSVSG----------RLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       223 ~~~~~~~~s~~~----------~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..+.+++|+|++          .+|++|+.||.|++||+.++
T Consensus       355 ~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          355 PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             CceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            346889999998          79999999999999997654

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-31  Score=242.76  Aligned_cols=244  Identities=13%  Similarity=0.108  Sum_probs=194.0

Q ss_pred             ceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         21 WVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        21 ~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      .|.+++|+|++++| ++|+.||.|++|++....  ......+.  .|...|.++.|++++++|++|+.||.|++|++.++
T Consensus       104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~  181 (450)
T 2vdu_B          104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTS--KNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSI  181 (450)
T ss_dssp             CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS--SSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC
T ss_pred             ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC--CceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCc
Confidence            69999999999996 899999999999986211  11222333  56688999999999999999999999999999877


Q ss_pred             ceee----ecccCccceeEEEEeeC-CCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeee
Q psy14961         98 QLLQ----SFHGHTGELMDLDLAPS-ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQ  172 (320)
Q Consensus        98 ~~~~----~~~~~~~~v~~~~~~~~-~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~  172 (320)
                      ....    .+.+|...|.+++|+|. ..+.+|++++.|+.|++||++++.++..+                         
T Consensus       182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-------------------------  236 (450)
T 2vdu_B          182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW-------------------------  236 (450)
T ss_dssp             CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-------------------------
T ss_pred             ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-------------------------
Confidence            6543    77889999999999774 22679999999999999998776543221                         


Q ss_pred             eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-----------------------cceeeeEEEE
Q psy14961        173 SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-----------------------SILFGATSVD  229 (320)
Q Consensus       173 ~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~~~~~~  229 (320)
                       +.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+...                       .....+..+.
T Consensus       237 -~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~  314 (450)
T 2vdu_B          237 -LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII  314 (450)
T ss_dssp             -CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred             -ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence             34688899999999 9999999999999999999998877665421                       1113467899


Q ss_pred             EecCCcEEEEEe-CCCeEEEEcC--CCC---eEEEEeecCCCceeEEEECcCCCeEEEecC------CCceEeeecc
Q psy14961        230 FSVSGRLLFAGY-NDYTINVWDS--LKC---CRVNHLMGHENRVSCLQVSPDGTAFSSGSW------DTTLRDEESK  294 (320)
Q Consensus       230 ~s~~~~~l~~g~-~dg~v~~wd~--~~~---~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~------D~~ir~~~~~  294 (320)
                      |+|++++|++++ .++.|++||+  ...   ..+..+..| ..|.+++|+|++.+++.++.      +..|++|...
T Consensus       315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          315 KSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             ECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred             EeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence            999999999999 8999999998  444   667777788 88999999996544444443      5567888753

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=6e-32  Score=230.35  Aligned_cols=263  Identities=13%  Similarity=0.071  Sum_probs=184.0

Q ss_pred             CeEeecccc---eeEEEEEeCccceEEEEEcCCCCEEEEe--cCCCeEEEEEecccCC--cccccccccccccCeEEEEe
Q psy14961          1 MIIWDGLTQ---TKEHSVTMPATWVMACAYAPSGSVVASG--GLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIF   73 (320)
Q Consensus         1 ~~~W~~~~~---~~~~~~~~~~~~V~~~~~~~~~~~l~s~--~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~   73 (320)
                      +.+|+..+.   ++.+....++.+|..++|.||..-|+..  +.-..-.++-+....+  .........+|...|..+  
T Consensus        65 v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l--  142 (356)
T 2w18_A           65 VSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL--  142 (356)
T ss_dssp             EEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE--
T ss_pred             EEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec--
Confidence            468999988   7888888888899999999977644433  2222223333322111  111111123344444443  


Q ss_pred             cCCCCEEEEEe---CCCeEEEEEC-CCcceeeecccCccceeEEEEee-CCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         74 PNSDQQILTGS---GDCTCALWDV-ESSQLLQSFHGHTGELMDLDLAP-SETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        74 ~~~~~~l~s~~---~dg~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                       +++ .++.++   .|+.|++|++ .+++.+..+..|...+..++|++ .-++..|++++.|++|++||+++++++.++.
T Consensus       143 -~~g-~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~  220 (356)
T 2w18_A          143 -TKR-RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH  220 (356)
T ss_dssp             -TTT-EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             -CCC-cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence             344 444443   4999999999 55888888888999999999987 3457899999999999999999998887775


Q ss_pred             cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE------------EEeeCCCeEEEEECCCCeeEeEE
Q psy14961        149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV------------ATGSDDATCRLFDLRADKEVACY  216 (320)
Q Consensus       149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l------------~s~s~dg~i~iwd~~~~~~~~~~  216 (320)
                      ++..                        +...+.+++|+|+|.++            ++|+.|+++++||..+++.+..+
T Consensus       221 g~~~------------------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~  276 (356)
T 2w18_A          221 IDDS------------------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM  276 (356)
T ss_dssp             CCC---------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred             CCCc------------------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence            4321                        22357788899988775            67889999999999998876543


Q ss_pred             ec---CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCcee-EEEECcCCCeEEEecCCCceEeee
Q psy14961        217 KK---DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS-CLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       217 ~~---~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~-~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ..   ......  .+..+.++.++|+|+.|++|+|||+.+++.+.++.+|.+.+. .++|||||++|+|||.|++||+|+
T Consensus       277 ~~~~p~Gh~~~--~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd  354 (356)
T 2w18_A          277 LYCLPPGQAGR--FLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH  354 (356)
T ss_dssp             EECCCTTCCCC--EEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred             EeeccCCCcce--eEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence            21   111001  122333478999999999999999999999999999987654 699999999999999999999998


Q ss_pred             c
Q psy14961        293 S  293 (320)
Q Consensus       293 ~  293 (320)
                      .
T Consensus       355 ~  355 (356)
T 2w18_A          355 Y  355 (356)
T ss_dssp             E
T ss_pred             C
Confidence            5

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-33  Score=251.18  Aligned_cols=257  Identities=14%  Similarity=0.226  Sum_probs=201.4

Q ss_pred             EEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCC---cc--
Q psy14961         26 AYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVES---SQ--   98 (320)
Q Consensus        26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~---~~--   98 (320)
                      .|+|+++.+++++      .|+.     .......+ .+|...|.++.|++ ++++|++|+.||+|++||+.+   +.  
T Consensus        34 ~f~~~~~~~~~~~------~w~~-----~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~  102 (437)
T 3gre_A           34 EFGPIQEIVRSPN------MGNL-----RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY  102 (437)
T ss_dssp             GGCCCCCCCCCCC------GGGC-----CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC
T ss_pred             hcCCccccccccc------cccc-----cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc
Confidence            3677888777765      2542     22334455 78899999999999 999999999999999999876   33  


Q ss_pred             -eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC---CCcEEEEeccC------------------------
Q psy14961         99 -LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR---TGYCVQSFEGH------------------------  150 (320)
Q Consensus        99 -~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~---~~~~~~~~~~~------------------------  150 (320)
                       ....+ .|...|.++++.+  +++.|++++.||.|++||+.   .++....+..+                        
T Consensus       103 ~~~~~~-~h~~~v~~~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  179 (437)
T 3gre_A          103 SSSLTY-DCSSTVTQITMIP--NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN  179 (437)
T ss_dssp             SCSEEE-ECSSCEEEEEECT--TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC
T ss_pred             ceeeec-cCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEc
Confidence             22222 4889999998864  67899999999999999994   44433322110                        


Q ss_pred             --Cc---cccCCCeEEEEECcCCeeeeeecC--CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        151 --HN---LITDDKLVNIWDMRTGYCVQSFEG--HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       151 --~~---~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                        ..   ..+.|+.|++||+++++++..+.+  |...|.+++|+|++++|++|+.||.|++||++.++.+..+..... .
T Consensus       180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~  258 (437)
T 3gre_A          180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH-A  258 (437)
T ss_dssp             SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC-E
T ss_pred             CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC-C
Confidence              11   124689999999999999999988  889999999999999999999999999999999887766542211 2


Q ss_pred             eeEEEE----EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec--------------------------CCCceeEEEEC
Q psy14961        224 GATSVD----FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG--------------------------HENRVSCLQVS  273 (320)
Q Consensus       224 ~~~~~~----~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~--------------------------h~~~i~~i~~s  273 (320)
                      .+.++.    |+|++.+|++|+.||.|++||+.++..+..+.+                          |...|++++|+
T Consensus       259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~  338 (437)
T 3gre_A          259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS  338 (437)
T ss_dssp             EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred             ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence            456774    456788999999999999999998887776664                          45568889999


Q ss_pred             cCCCeEEEecCCCceEeeecchHhh
Q psy14961        274 PDGTAFSSGSWDTTLRDEESKNRYV  298 (320)
Q Consensus       274 ~~~~~l~s~s~D~~ir~~~~~~~~~  298 (320)
                       ++++|++|+.|++|++|+..+.-.
T Consensus       339 -~~~~l~s~~~d~~i~~wd~~~~~~  362 (437)
T 3gre_A          339 -NDKILLTDEATSSIVMFSLNELSS  362 (437)
T ss_dssp             -TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred             -CceEEEecCCCCeEEEEECCCccc
Confidence             779999999999999999765533

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-31  Score=227.18  Aligned_cols=245  Identities=22%  Similarity=0.405  Sum_probs=202.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++||..+++.......|...|.+++|+|++++|++++.|+.+++|++.... .......+..|...|.++.|  +++.+
T Consensus        41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~l  117 (313)
T 3odt_A           41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS-GEDPLYTLIGHQGNVCSLSF--QDGVV  117 (313)
T ss_dssp             EEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT-TSCC-CEECCCSSCEEEEEE--ETTEE
T ss_pred             EEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC-CCCcccchhhcccCEEEEEe--cCCEE
Confidence            5799999888887788889999999999999999999999999999985422 22334556789999999999  56799


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc-CCc-------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG-HHN-------  152 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~-~~~-------  152 (320)
                      ++++.||.|++||  .+..+..+..|...+.++.+.+. +++.+++++.|+.|++||.  +.....+.. +..       
T Consensus       118 ~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~  192 (313)
T 3odt_A          118 ISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF-SENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAV  192 (313)
T ss_dssp             EEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET-TTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEE
T ss_pred             EEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC-CCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEE
Confidence            9999999999999  56777788889999999988763 4689999999999999994  333444333 221       


Q ss_pred             -----c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        153 -----L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       153 -----~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                           +  ...++.|++||+++++++..+.+|...|.+++|+|++ .+++++.||.|++||+++++....+..+..  .+
T Consensus       193 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--~i  269 (313)
T 3odt_A          193 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI--SI  269 (313)
T ss_dssp             EETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS--CE
T ss_pred             cCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc--eE
Confidence                 1  2468999999999999999999999999999999999 589999999999999999887776655432  46


Q ss_pred             EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      .+++|+|+++ +++++.||.|++||+.+....
T Consensus       270 ~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~  300 (313)
T 3odt_A          270 WSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA  300 (313)
T ss_dssp             EEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred             EEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence            7899999998 567899999999998776544

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.8e-33  Score=241.86  Aligned_cols=211  Identities=23%  Similarity=0.309  Sum_probs=167.7

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      .+.+|...|.++.|++++++|++|+.|++|++||+.++.  ++..+.+|.+.|.+++|.+..+++.|++|+.|+.|++||
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            356899999999999999999999999999999998764  467788999999999986544578999999999999999


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      ++++..                         .+...+.+|...|.+++|+|+  +.+|++|+.|++|++||++.+.....
T Consensus        88 ~~~~~~-------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~  142 (316)
T 3bg1_A           88 EENGTW-------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV  142 (316)
T ss_dssp             CSSSCC-------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred             CCCCcc-------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence            876521                         123345678999999999998  78999999999999999986532211


Q ss_pred             -EecCcceeeeEEEEEecC-----------------CcEEEEEeCCCeEEEEcCCCC---eEEEEeecCCCceeEEEECc
Q psy14961        216 -YKKDSILFGATSVDFSVS-----------------GRLLFAGYNDYTINVWDSLKC---CRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       216 -~~~~~~~~~~~~~~~s~~-----------------~~~l~~g~~dg~v~~wd~~~~---~~~~~~~~h~~~i~~i~~s~  274 (320)
                       .........+.+++|+|+                 +.+|++|+.|++|++||....   ..+..+.+|.++|.+++|+|
T Consensus       143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp  222 (316)
T 3bg1_A          143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP  222 (316)
T ss_dssp             CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC
T ss_pred             eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC
Confidence             111111123567788887                 478999999999999998643   46677889999999999999


Q ss_pred             CC----CeEEEecCCCceEeeecch
Q psy14961        275 DG----TAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       275 ~~----~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++    ++|||||.|++|++|+...
T Consensus       223 ~~~~~~~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          223 SIGLPTSTIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             CSSCSCCEEEEEETTCEEEEEECSS
T ss_pred             CCCCCCceEEEEcCCCeEEEEEccC
Confidence            86    8899999999999999754

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=9.4e-31  Score=227.12  Aligned_cols=255  Identities=20%  Similarity=0.302  Sum_probs=192.7

Q ss_pred             EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEeCCCeEEEEECCCcc-----eeeecccCccc
Q psy14961         36 SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGSGDCTCALWDVESSQ-----LLQSFHGHTGE  109 (320)
Q Consensus        36 s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~  109 (320)
                      +|-..|+..+|-.....+......++.+|.+.|+++.|+|+ +++|++|+.|++|++||+.+.+     +...+.+|...
T Consensus         9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~   88 (340)
T 4aow_A            9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF   88 (340)
T ss_dssp             -----------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSC
T ss_pred             cccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCC
Confidence            33334544444322222333445578899999999999987 5789999999999999986543     45678899999


Q ss_pred             eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc-------------c--ccCCCeEEEEECcCCe-eeee
Q psy14961        110 LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN-------------L--ITDDKLVNIWDMRTGY-CVQS  173 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~-------------~--~~~d~~i~iwd~~~~~-~~~~  173 (320)
                      |.+++|.  +++++|++++.|+.|++|+............+..             +  ...|+.+++||..... ....
T Consensus        89 V~~~~~s--~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~  166 (340)
T 4aow_A           89 VSDVVIS--SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ  166 (340)
T ss_dssp             EEEEEEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred             EEEEEEC--CCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE
Confidence            9998885  5689999999999999999988765544332221             1  2468999999987654 3445


Q ss_pred             ecCCCCCeEEEEEcCCC--CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        174 FEGHQSDVNSVKFHPSG--DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      ..+|...+..++|++++  ..+++++.|+.|++||+++++.+..+..+..  .+.+++|+|++++|++|+.||.|++||.
T Consensus       167 ~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~Dg~i~iwd~  244 (340)
T 4aow_A          167 DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASGGKDGQAMLWDL  244 (340)
T ss_dssp             SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence            67899999999999875  5788999999999999999887766654432  4678999999999999999999999999


Q ss_pred             CCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        252 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       252 ~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .+...+..+.. ...|.+++|+|++. +++++.|++|++|+.+..
T Consensus       245 ~~~~~~~~~~~-~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~  287 (340)
T 4aow_A          245 NEGKHLYTLDG-GDIINALCFSPNRY-WLCAATGPSIKIWDLEGK  287 (340)
T ss_dssp             TTTEEEEEEEC-SSCEEEEEECSSSS-EEEEEETTEEEEEETTTT
T ss_pred             ccCceeeeecC-CceEEeeecCCCCc-eeeccCCCEEEEEECCCC
Confidence            99888877665 46899999999875 556778999999997543

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.1e-33  Score=246.75  Aligned_cols=226  Identities=14%  Similarity=0.143  Sum_probs=178.5

Q ss_pred             ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961         63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT  140 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~  140 (320)
                      .+...|.++.|++++++|++|+.|+.|++||+.++  +.+..+.+|...|.+++++|  ++++|++++.|+.|++||+.+
T Consensus         9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~v~vwd~~~   86 (377)
T 3dwl_C            9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP--KSNRIVTCSQDRNAYVYEKRP   86 (377)
T ss_dssp             ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT--TTCCEEEEETTSSEEEC----
T ss_pred             cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC--CCCEEEEEeCCCeEEEEEcCC
Confidence            35678999999999999999999999999999987  77888899999999998855  578999999999999999988


Q ss_pred             Cc---EEEEeccCCcc---------------ccCCCeEEEEECcCCe---eeeeecC-CCCCeEEEEEcCCCCEEEEeeC
Q psy14961        141 GY---CVQSFEGHHNL---------------ITDDKLVNIWDMRTGY---CVQSFEG-HQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       141 ~~---~~~~~~~~~~~---------------~~~d~~i~iwd~~~~~---~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      +.   ....+.+|...               .+.|+.|++||++++.   ....+.+ |...|.+++|+|++++|++++.
T Consensus        87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~  166 (377)
T 3dwl_C           87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA  166 (377)
T ss_dssp             --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred             CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence            76   44444333322               1358899999999876   4677777 9999999999999999999999


Q ss_pred             CCeEEEEECCCC------------------eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE----
Q psy14961        199 DATCRLFDLRAD------------------KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR----  256 (320)
Q Consensus       199 dg~i~iwd~~~~------------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~----  256 (320)
                      |+.|++||+...                  +.+..+   .....+.+++|+|++++|++|+.||.|++||+.+...    
T Consensus       167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~  243 (377)
T 3dwl_C          167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA  243 (377)
T ss_dssp             SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred             CCEEEEEEEEecccCCCccccccccccchhhhhhcc---cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence            999999998532                  222222   1122467899999999999999999999999887765    


Q ss_pred             EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +..+.+|..+|.+++|+|++++|++|+.|+.+..|..
T Consensus       244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~  280 (377)
T 3dwl_C          244 LITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN  280 (377)
T ss_dssp             CCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred             eEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence            7788999999999999999999999988887754444

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4e-31  Score=232.30  Aligned_cols=229  Identities=17%  Similarity=0.208  Sum_probs=192.1

Q ss_pred             cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961         62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR  139 (320)
Q Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~  139 (320)
                      ..|...|.++.|+++++++++++.|+.|++||+.+++  .+..+.+|...|.++++.+  ++++|++++.|+.|++||+.
T Consensus         5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP--DSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEEEE
T ss_pred             cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC--CCCEEEEEcCCCeEEEEECC
Confidence            3588899999999999999999999999999999887  7888889999999998876  58899999999999999998


Q ss_pred             CCcEEEEe--ccCCcc---------------ccCCCeEEEEECcCCee----eeeecCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        140 TGYCVQSF--EGHHNL---------------ITDDKLVNIWDMRTGYC----VQSFEGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       140 ~~~~~~~~--~~~~~~---------------~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      +++....+  ..+...               ...++.+++||++.+..    .....+|...|.+++|+|++++|++++.
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  162 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  162 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence            87643332  222211               13578999999988652    2333678999999999999999999999


Q ss_pred             CCeEEEEECC------------------CCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961        199 DATCRLFDLR------------------ADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL  260 (320)
Q Consensus       199 dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~  260 (320)
                      |+.|++||++                  .++.+..+..+.  ..+.+++|+|++.+|++|+.|+.|++||+.+...+..+
T Consensus       163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  240 (372)
T 1k8k_C          163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC--GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL  240 (372)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS--SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred             CCCEEEEEcccccccccccccccccccchhhheEecCCCC--CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence            9999999964                  444444443322  24678999999999999999999999999988899999


Q ss_pred             ecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        261 MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       261 ~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ..|..+|.+++|+|++++|++| .|+.|++|+...
T Consensus       241 ~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          241 ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred             ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence            9999999999999999988887 999999999766

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=7.8e-32  Score=242.83  Aligned_cols=233  Identities=19%  Similarity=0.333  Sum_probs=185.0

Q ss_pred             ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----------eeeecccCc------------cceeEEEEeeCC
Q psy14961         63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----------LLQSFHGHT------------GELMDLDLAPSE  119 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~  119 (320)
                      .+...|.++.|++++++|++|+.||.|++||+.+++           +...+.+|.            +.|.+++|.+..
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            467899999999999999999999999999998776           467788898            889999997753


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCcEE---------------------------------------EE-eccCCcc------
Q psy14961        120 TGNTFVSGSSDKLVNIWDMRTGYCV---------------------------------------QS-FEGHHNL------  153 (320)
Q Consensus       120 ~~~~l~s~~~dg~i~lwd~~~~~~~---------------------------------------~~-~~~~~~~------  153 (320)
                      +...|++++.|+.|++||+..+...                                       .. ..+|...      
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence            3379999999999999998653321                                       11 1233221      


Q ss_pred             --------ccCCCeEEEEECcC-Ceeee-------eecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee----
Q psy14961        154 --------ITDDKLVNIWDMRT-GYCVQ-------SFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE----  212 (320)
Q Consensus       154 --------~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~----  212 (320)
                              .+.|+.|++||+++ +.+..       .+.+|...|.+++|+|++ ++|++|+.||.|++||+++++.    
T Consensus       186 ~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  265 (447)
T 3dw8_B          186 NSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH  265 (447)
T ss_dssp             CTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred             cCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence                    13689999999984 44443       366899999999999998 9999999999999999998765    


Q ss_pred             EeEEecCcce----------eeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeecCCCc---------------
Q psy14961        213 VACYKKDSIL----------FGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMGHENR---------------  266 (320)
Q Consensus       213 ~~~~~~~~~~----------~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~---------------  266 (320)
                      ...+..+...          ..+.+++|+|+|++|++|+. +.|++||+.. ..++..+.+|...               
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  344 (447)
T 3dw8_B          266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD  344 (447)
T ss_dssp             CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred             eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence            3444433210          14688999999999999999 9999999986 7778888888642               


Q ss_pred             eeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        267 VSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       267 i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +..++|+|++++|++|+.|++|++|+....
T Consensus       345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~  374 (447)
T 3dw8_B          345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTK  374 (447)
T ss_dssp             CCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred             ceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence            234999999999999999999999997554

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.1e-31  Score=233.38  Aligned_cols=235  Identities=20%  Similarity=0.305  Sum_probs=193.2

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      +.++.|++  ..+++++.|+.|++|++....    ....+ ..|...|.++.|++++.+|++|+.||.|++||+.+++.+
T Consensus        96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~----~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~  169 (401)
T 4aez_A           96 LNLLDWSN--LNVVAVALERNVYVWNADSGS----VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL  169 (401)
T ss_dssp             CBCEEECT--TSEEEEEETTEEEEEETTTCC----EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred             EEEEeecC--CCEEEEECCCeEEEeeCCCCc----EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE
Confidence            44566665  457888899999999985322    11222 237889999999999999999999999999999999999


Q ss_pred             eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCC
Q psy14961        101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD  180 (320)
Q Consensus       101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  180 (320)
                      ..+..|...|.++++    +++.|++++.||.|++||++...                          .....+.+|...
T Consensus       170 ~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~--------------------------~~~~~~~~~~~~  219 (401)
T 4aez_A          170 RTMAGHQARVGCLSW----NRHVLSSGSRSGAIHHHDVRIAN--------------------------HQIGTLQGHSSE  219 (401)
T ss_dssp             EEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSS--------------------------CEEEEEECCSSC
T ss_pred             EEecCCCCceEEEEE----CCCEEEEEcCCCCEEEEecccCc--------------------------ceeeEEcCCCCC
Confidence            999999999999887    35799999999999999987432                          123445678899


Q ss_pred             eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe--CCCeEEEEcCCCCeEE
Q psy14961        181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY--NDYTINVWDSLKCCRV  257 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~--~dg~v~~wd~~~~~~~  257 (320)
                      |.+++|+|++.+|++++.|+.|++||+++++....+..+..  .+.+++|+|++. ++++|+  .|+.|++||+.++..+
T Consensus       220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~  297 (401)
T 4aez_A          220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA--AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV  297 (401)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS--CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred             eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc--eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence            99999999999999999999999999998877665544332  457899999765 666655  7999999999988888


Q ss_pred             EEeecCCCceeEEEECcCCCeEEE--ecCCCceEeeecch
Q psy14961        258 NHLMGHENRVSCLQVSPDGTAFSS--GSWDTTLRDEESKN  295 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~~~~l~s--~s~D~~ir~~~~~~  295 (320)
                      ..+. |...|.+++|+|++++|++  |+.|+.|++|+...
T Consensus       298 ~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~  336 (401)
T 4aez_A          298 NTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS  336 (401)
T ss_dssp             EEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred             EEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence            7765 6678999999999999999  55899999999755

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-31  Score=234.14  Aligned_cols=255  Identities=15%  Similarity=0.100  Sum_probs=191.1

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccC-----Cccccc-ccccccccCeEEEEec
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALED-----DSSAKK-KTVATHTSFISCCIFP   74 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~-----~~~~~~-~~~~~h~~~v~~~~~~   74 (320)
                      |++||..+++....+.  ...|.++.|+|+   +++++.|+.+++|+.....     ...... .....|...|.++.|+
T Consensus        60 v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  134 (343)
T 3lrv_A           60 LHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGH  134 (343)
T ss_dssp             EEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECC
T ss_pred             EEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcC
Confidence            5799999888776655  466788889988   9999999999999865210     011111 1122566889999999


Q ss_pred             C--CCCEEEEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         75 N--SDQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        75 ~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      +  +++++++++.||+|++||+++++.+.... .+...+.+++++|  ++.+|++|+.||.|++||++++..+       
T Consensus       135 ~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p--dg~~lasg~~dg~i~iwd~~~~~~~-------  205 (343)
T 3lrv_A          135 NEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK--DSLLLALYSPDGILDVYNLSSPDQA-------  205 (343)
T ss_dssp             C---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT--TSCEEEEECTTSCEEEEESSCTTSC-------
T ss_pred             CCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC--CCCEEEEEcCCCEEEEEECCCCCCC-------
Confidence            9  99999999999999999999988866553 3455788888754  6899999999999999998876432       


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec---CcceeeeEE
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK---DSILFGATS  227 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~  227 (320)
                                         ...+.+ |..+|.+++|+|+|.+|++++ |+.|++||++..+....+..   +.......+
T Consensus       206 -------------------~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  265 (343)
T 3lrv_A          206 -------------------SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT  265 (343)
T ss_dssp             -------------------CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred             -------------------ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceE
Confidence                               023344 888999999999999999999 55999999998765433221   111111146


Q ss_pred             EEEecCCcEEEEEeC-CCeEEEEcCCCCeEEEEeecCCCceeEEEECc---CCCeEEEecCCCceEeeec
Q psy14961        228 VDFSVSGRLLFAGYN-DYTINVWDSLKCCRVNHLMGHENRVSCLQVSP---DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       228 ~~~s~~~~~l~~g~~-dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~---~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++|+|+|++|++|+. ++.+++|+.......-..    .++..++|+|   +.+.|++++.|+.++++-.
T Consensus       266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             EEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence            999999999999998 999999987554332222    5678899999   8899999999999998753

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-31  Score=237.92  Aligned_cols=238  Identities=9%  Similarity=0.092  Sum_probs=183.5

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCc-------------------------cccccccc-ccccCeEEEE
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS-------------------------SAKKKTVA-THTSFISCCI   72 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-------------------------~~~~~~~~-~h~~~v~~~~   72 (320)
                      ..+|.+++|+|||+++|+++.|++|+  |......-                         ......+. .|...|.++.
T Consensus        15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va   92 (588)
T 2j04_A           15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK   92 (588)
T ss_dssp             SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred             hccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence            47999999999999999999999996  43211100                         00001111 4578899999


Q ss_pred             ecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcc-----ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE----
Q psy14961         73 FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG-----ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC----  143 (320)
Q Consensus        73 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~----  143 (320)
                      |+|+|+.|++++.||+|++||.++  ++..+. |..     .+.+++|  +|+|++|++|+.||.|++||+..+..    
T Consensus        93 wSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svaf--SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~  167 (588)
T 2j04_A           93 PSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEW--NPIESSIVVGNEDGELQFFSIRKNSENTPE  167 (588)
T ss_dssp             ECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEE--CSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred             ECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEE--cCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence            999999999999999999999654  555566 554     4887777  55799999999999999999987531    


Q ss_pred             ---EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE---eEEe
Q psy14961        144 ---VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV---ACYK  217 (320)
Q Consensus       144 ---~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~---~~~~  217 (320)
                         +.++..+                       ..+|...|.+++|+|+|  +++++.|+++++||+..++..   ..+.
T Consensus       168 ~i~l~ti~~~-----------------------~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~  222 (588)
T 2j04_A          168 FYFESSIRLS-----------------------DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ  222 (588)
T ss_dssp             CEEEEEEECS-----------------------CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE
T ss_pred             ceeeeeeecc-----------------------cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec
Confidence               1111111                       25688899999999999  888999999999999876632   2222


Q ss_pred             -cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEE--CcCCCeEEEecCCCceEeeecc
Q psy14961        218 -KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV--SPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       218 -~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~--s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                       .+.  ..+.+++|+  |+.||+++ +++|++||...........+|.+.|+.++|  +||++.|++|+.||+ |+|...
T Consensus       223 ~~h~--~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          223 NASR--RKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             CCCS--SCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             cccc--CcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence             221  246788999  68999887 699999998887764444489999999999  999999999999999 999863

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.7e-31  Score=231.96  Aligned_cols=250  Identities=16%  Similarity=0.199  Sum_probs=192.8

Q ss_pred             CeEeecccceeEEEE-EeCccceEEEEEcCC---CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe---
Q psy14961          1 MIIWDGLTQTKEHSV-TMPATWVMACAYAPS---GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF---   73 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~-~~~~~~V~~~~~~~~---~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~---   73 (320)
                      |+|||..+++..... ..|...|.+++|+|+   +++|++|+.||.|++|++....   .....+..|...|.++.|   
T Consensus        46 v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~  122 (357)
T 3i2n_A           46 IQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE---MPVYSVKGHKEIINAIDGIGG  122 (357)
T ss_dssp             EEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS---SCSEEECCCSSCEEEEEEESG
T ss_pred             EEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC---ccEEEEEecccceEEEeeccc
Confidence            479999987765433 357789999999998   6999999999999999985332   134567789999999954   


Q ss_pred             ---cCCCCEEEEEeCCCeEEEEECCCcc-eeeecccCcc----ceeEEEEe--eCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         74 ---PNSDQQILTGSGDCTCALWDVESSQ-LLQSFHGHTG----ELMDLDLA--PSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        74 ---~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~----~v~~~~~~--~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                         +++++.|++++.||.|++||+.++. ++..+..|.+    .+.++.+.  .+++++.+++++.|+.|++||+++++.
T Consensus       123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  202 (357)
T 3i2n_A          123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL  202 (357)
T ss_dssp             GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred             cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence               6788999999999999999998876 6666665554    67777653  356789999999999999999998875


Q ss_pred             EEEe-----------cc---CCcc---ccCCCeEEEEECcCCeeeeeec-----CCCCCeEEEEEcCCCC-EEEEeeCCC
Q psy14961        144 VQSF-----------EG---HHNL---ITDDKLVNIWDMRTGYCVQSFE-----GHQSDVNSVKFHPSGD-AVATGSDDA  200 (320)
Q Consensus       144 ~~~~-----------~~---~~~~---~~~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~v~~~p~g~-~l~s~s~dg  200 (320)
                      ....           .+   ....   ...++.|++||++++++...+.     +|...|.+++|+|++. +|++++.||
T Consensus       203 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg  282 (357)
T 3i2n_A          203 RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG  282 (357)
T ss_dssp             EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred             eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence            4322           21   1111   2468899999998877665554     8999999999999998 799999999


Q ss_pred             eEEEEECCCCe-------------------eEeEEecCcceeeeEEEEEecCCcEEE-EEeCCCeEEEEcCCCCe
Q psy14961        201 TCRLFDLRADK-------------------EVACYKKDSILFGATSVDFSVSGRLLF-AGYNDYTINVWDSLKCC  255 (320)
Q Consensus       201 ~i~iwd~~~~~-------------------~~~~~~~~~~~~~~~~~~~s~~~~~l~-~g~~dg~v~~wd~~~~~  255 (320)
                      .|++||++.+.                   .+..+..+.  ..+.+++|+|++++|+ +|+.||.|++||+.+..
T Consensus       283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST--QPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS--SCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             cEEEeecCCCcccccccCCCCccccccccceeeccccCC--CCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            99999987543                   222222222  2467899999999998 79999999999987643

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.2e-31  Score=233.75  Aligned_cols=245  Identities=14%  Similarity=0.204  Sum_probs=188.9

Q ss_pred             CeEeecccceeEEEEE--eCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVT--MPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~--~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |+|||..+.+......  .|...|.+++|+| ++++|++++.|+.|++||+..  ...........|...|.++.|++++
T Consensus        98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~  175 (383)
T 3ei3_B           98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSR  175 (383)
T ss_dssp             EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred             EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC--CceEEEeccCCCCCCeEEEEECCCC
Confidence            5799999877765554  4888999999999 789999999999999999852  2222222223455889999999999


Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCC----CcEEEEec----
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRT----GYCVQSFE----  148 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~----~~~~~~~~----  148 (320)
                      +.+++|+.|+.|++||+ +++.+..+..|...|.++++.|  ++. .|++++.|+.|++||+++    +.++..+.    
T Consensus       176 ~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  252 (383)
T 3ei3_B          176 QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP--RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP  252 (383)
T ss_dssp             TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS--SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC
T ss_pred             CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC--CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc
Confidence            99999999999999999 5777888889999999998865  466 999999999999999987    55544331    


Q ss_pred             -------c-CCcc---ccCCCeEEEEECcCCeeeeeecCCC-----------------CCeEEEEEcCCCCEEEEeeCCC
Q psy14961        149 -------G-HHNL---ITDDKLVNIWDMRTGYCVQSFEGHQ-----------------SDVNSVKFHPSGDAVATGSDDA  200 (320)
Q Consensus       149 -------~-~~~~---~~~d~~i~iwd~~~~~~~~~~~~~~-----------------~~v~~v~~~p~g~~l~s~s~dg  200 (320)
                             . ....   .+.|+.|++||++++.+...+.+|.                 ..+..++|+|++++  +++.|+
T Consensus       253 v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~  330 (383)
T 3ei3_B          253 VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKR  330 (383)
T ss_dssp             EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCC
T ss_pred             eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCC
Confidence                   1 1111   2357899999999887766665443                 23444666666665  778999


Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      .|++||+.+++.+..+..+.....+..++|+|++.+|++|+ |+.|++||+.+
T Consensus       331 ~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          331 TIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             CEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             eEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            99999999988877765432222345679999999999997 99999999753

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3.3e-31  Score=238.72  Aligned_cols=255  Identities=23%  Similarity=0.391  Sum_probs=195.3

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |++||..+++....+..|...|.+++|  ++++|++|+.||.|++||+...    .....+..|...|.++.|.  ++.+
T Consensus       155 i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~~--~~~l  226 (435)
T 1p22_A          155 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG----EMLNTLIHHCEAVLHLRFN--NGMM  226 (435)
T ss_dssp             EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC----CEEEEECCCCSCEEEEECC--TTEE
T ss_pred             EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC----cEEEEEcCCCCcEEEEEEc--CCEE
Confidence            579999999988888889999999988  7889999999999999998532    3345677899999999996  4599


Q ss_pred             EEEeCCCeEEEEECCCccee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---
Q psy14961         81 LTGSGDCTCALWDVESSQLL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---  154 (320)
                      ++|+.||.|++||+.++...   ..+.+|...|.++++    +++.+++|+.||.|++||+++++.+..+.+|...+   
T Consensus       227 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~  302 (435)
T 1p22_A          227 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL  302 (435)
T ss_dssp             EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred             EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe----CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEE
Confidence            99999999999999887654   567789999988877    46899999999999999999999888887765432   


Q ss_pred             ----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe---------eEeE
Q psy14961        155 ----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK---------EVAC  215 (320)
Q Consensus       155 ----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~---------~~~~  215 (320)
                                +.|+.|++||+++++++..+.+|...|.+++|  ++.+|++|+.||.|++||+..++         .+..
T Consensus       303 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~  380 (435)
T 1p22_A          303 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT  380 (435)
T ss_dssp             EEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEE
T ss_pred             EeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheee
Confidence                      36899999999999999999999999999999  67899999999999999986543         3333


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      +..+..  .+.+++|  ++.+|++|+.||.|++||+.+....... ....+..++.|.+
T Consensus       381 ~~~h~~--~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~  434 (435)
T 1p22_A          381 LVEHSG--RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE-PPRSPSRTYTYIS  434 (435)
T ss_dssp             ECCCSS--CCCCEEE--CSSCEEECCSSSEEEEEC------------------------
T ss_pred             ccCCCC--CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC-CCCCCccceeeec
Confidence            333322  3456666  7889999999999999998765444322 2334455555544

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=5.8e-30  Score=220.08  Aligned_cols=243  Identities=21%  Similarity=0.402  Sum_probs=192.6

Q ss_pred             CeEeecccceeEEEEE--eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVT--MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~--~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+|||..+++....+.  .|...|++++|+|++++|++|+.||.|++|++..    ......+.+|...+.+..+  ++.
T Consensus        47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~----~~~~~~~~~h~~~~~~~~~--~~~  120 (318)
T 4ggc_A           47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ----QKRLRNMTSHSARVGSLSW--NSY  120 (318)
T ss_dssp             EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEE--ETT
T ss_pred             EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC----ceeEEEecCccceEEEeec--CCC
Confidence            5799999988776554  4667899999999999999999999999999853    2344567788888777655  457


Q ss_pred             EEEEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE----EEeccC---
Q psy14961         79 QILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV----QSFEGH---  150 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~----~~~~~~---  150 (320)
                      .+++++.++.+++|+.... ..+..+.+|...+..+.+.  ++++.|++++.|+.|++||+++++..    .....+   
T Consensus       121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  198 (318)
T 4ggc_A          121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA--PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA  198 (318)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred             EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEc--CCCCEEEEEecCcceeEEECCCCcccccceeeecccCCc
Confidence            8999999999999998765 4556778888888877764  46889999999999999999875421    111111   


Q ss_pred             ----------Ccc-----ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee--CCCeEEEEECCCCeeE
Q psy14961        151 ----------HNL-----ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS--DDATCRLFDLRADKEV  213 (320)
Q Consensus       151 ----------~~~-----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s--~dg~i~iwd~~~~~~~  213 (320)
                                ...     ...++.|++||.+........ .+...+..+.|+|+++.+++++  .|+.|++||+++++.+
T Consensus       199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~  277 (318)
T 4ggc_A          199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV  277 (318)
T ss_dssp             EEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred             eEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence                      111     135788999999887766554 4667899999999999887654  7999999999999888


Q ss_pred             eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        214 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..+..+..  .+.+++|+|+|++|++|+.||+|++||+.+.
T Consensus       278 ~~l~gH~~--~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          278 AELKGHTS--RVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             EEECCCSS--CEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             EEEcCCCC--CEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            77765443  4688999999999999999999999998654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-30  Score=224.41  Aligned_cols=232  Identities=16%  Similarity=0.267  Sum_probs=195.8

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      ..+.+|...|.++.|++++++|++++.||.|++||+.+++.+..+..|...|.++++.+  ++++|++++.||.|++||+
T Consensus        26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~  103 (369)
T 3zwl_B           26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC--FTKYCVTGSADYSIKLWDV  103 (369)
T ss_dssp             EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEET
T ss_pred             EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC--CCCEEEEEeCCCeEEEEEC
Confidence            45778999999999999999999999999999999999999999999999999998854  6889999999999999999


Q ss_pred             CCCcEEEEeccCCcc--------------ccCC-----CeEEEEECcCCe-----------eeeeecCCCC--CeEEEEE
Q psy14961        139 RTGYCVQSFEGHHNL--------------ITDD-----KLVNIWDMRTGY-----------CVQSFEGHQS--DVNSVKF  186 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~--------------~~~d-----~~i~iwd~~~~~-----------~~~~~~~~~~--~v~~v~~  186 (320)
                      .+++.+..+......              ...+     +.+++||++...           ....+..|..  .+.+++|
T Consensus       104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (369)
T 3zwl_B          104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW  183 (369)
T ss_dssp             TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred             CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence            999887766522111              1234     899999987653           3344555665  8999999


Q ss_pred             cCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC
Q psy14961        187 HPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN  265 (320)
Q Consensus       187 ~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~  265 (320)
                      +|++++|++++.||.|++||+++ .+.+..+..+..  .+.+++|+|++.+|++++.|+.|++||+.+...+..+. +..
T Consensus       184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~  260 (369)
T 3zwl_B          184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK--SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDC  260 (369)
T ss_dssp             CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS
T ss_pred             cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC--ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCC
Confidence            99999999999999999999998 566555554332  46789999999999999999999999999888877666 788


Q ss_pred             ceeEEEECcCCCeEEEecCCC--------------ceEeeecch
Q psy14961        266 RVSCLQVSPDGTAFSSGSWDT--------------TLRDEESKN  295 (320)
Q Consensus       266 ~i~~i~~s~~~~~l~s~s~D~--------------~ir~~~~~~  295 (320)
                      .+.+++|+|+++++++++.++              .+++|+...
T Consensus       261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~  304 (369)
T 3zwl_B          261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF  304 (369)
T ss_dssp             CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred             CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence            999999999999999999998              788888643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=8.9e-30  Score=228.67  Aligned_cols=276  Identities=11%  Similarity=0.098  Sum_probs=215.1

Q ss_pred             eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc-ccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA-KKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      ....+..+ ..+.+++|+|++.++++++.++.|++||+........ ....+..|...+.++.|++++..+++++.|+.|
T Consensus       115 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v  193 (433)
T 3bws_A          115 FISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV  193 (433)
T ss_dssp             EEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred             EEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence            33334433 4566899999888888899999999999853221110 011345788899999999888899999999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCc-----------c--c-
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHN-----------L--I-  154 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~-----------~--~-  154 (320)
                      ++||+++++.+..+..|...+.++++.+  +++.++ +++.|+.|++||+++++.+..+..+..           .  + 
T Consensus       194 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~  271 (433)
T 3bws_A          194 HVFDLKTLAYKATVDLTGKWSKILLYDP--IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIA  271 (433)
T ss_dssp             EEEETTTCCEEEEEECSSSSEEEEEEET--TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEE
T ss_pred             EEEECCCceEEEEEcCCCCCeeEEEEcC--CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEE
Confidence            9999999988888888888898888865  567775 555899999999998877665433221           1  1 


Q ss_pred             c--------CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961        155 T--------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGA  225 (320)
Q Consensus       155 ~--------~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~  225 (320)
                      .        .++.|++||+++++....+ .|...+.+++|+|+++.+ ++++.|+.+++||+.+++....+....   .+
T Consensus       272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---~~  347 (433)
T 3bws_A          272 QFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD---KP  347 (433)
T ss_dssp             EEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSS---SE
T ss_pred             ECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCC---CC
Confidence            1        3678999999998776655 355688999999999755 667899999999999887766655332   35


Q ss_pred             EEEEEecCCcEEEEEeC---------------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC-CCceE
Q psy14961        226 TSVDFSVSGRLLFAGYN---------------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-DTTLR  289 (320)
Q Consensus       226 ~~~~~s~~~~~l~~g~~---------------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-D~~ir  289 (320)
                      ..++|+|+|++|++++.               ||.|.+||..+++.+..+.. ...+.+++|+|||++|++++. |++|+
T Consensus       348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~  426 (433)
T 3bws_A          348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIR  426 (433)
T ss_dssp             EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred             CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEE
Confidence            68999999999988876               57999999988888877765 457899999999999988764 99999


Q ss_pred             eeecc
Q psy14961        290 DEESK  294 (320)
Q Consensus       290 ~~~~~  294 (320)
                      +|+..
T Consensus       427 v~~~~  431 (433)
T 3bws_A          427 VYRRD  431 (433)
T ss_dssp             EEEET
T ss_pred             EEEec
Confidence            99975

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-31  Score=231.78  Aligned_cols=232  Identities=11%  Similarity=0.055  Sum_probs=172.9

Q ss_pred             EcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC---------Cc
Q psy14961         27 YAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE---------SS   97 (320)
Q Consensus        27 ~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~---------~~   97 (320)
                      +.+++.+|++|+.||.|++||+.....    ...+.  ...|.++.+.+.   +++++.|++|++|+..         ++
T Consensus        44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~----~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~  114 (343)
T 3lrv_A           44 MYYDKWVCMCRCEDGALHFTQLKDSKT----ITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN  114 (343)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEESSSSC----EEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred             hcCCCCEEEEECCCCcEEEEECCCCcE----EEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence            456888999999999999999853321    11222  345666667665   9999999999999765         34


Q ss_pred             ceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         98 QLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        98 ~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      +.+..+. .|.++|.+++++|..+++++++++.||.|++||+++++++....                          ..
T Consensus       115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~--------------------------~~  168 (343)
T 3lrv_A          115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS--------------------------AK  168 (343)
T ss_dssp             CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC--------------------------CC
T ss_pred             ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe--------------------------cC
Confidence            4343333 56678988887653368899999999999999998876543221                          12


Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE-eEEec-CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV-ACYKK-DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      |...|.+++|+|+|.+|++|+.||.|++||+++++.. ..+.. +.  ..+.+++|+|++.+|++|+ ++.|++||+.+.
T Consensus       169 ~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~--~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~  245 (343)
T 3lrv_A          169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE--AKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD  245 (343)
T ss_dssp             SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT--SCEEEEEECTTSSEEEEEE-SSBEEEEETTSS
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC--CCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC
Confidence            4456899999999999999999999999999988765 44444 22  2468999999999999999 559999998876


Q ss_pred             eEEEEeec---CCCcee--EEEECcCCCeEEEecC-CCceEeeecchH
Q psy14961        255 CRVNHLMG---HENRVS--CLQVSPDGTAFSSGSW-DTTLRDEESKNR  296 (320)
Q Consensus       255 ~~~~~~~~---h~~~i~--~i~~s~~~~~l~s~s~-D~~ir~~~~~~~  296 (320)
                      .....+..   |...+.  +++|+|+|++|++++. |+.+++|+....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~  293 (343)
T 3lrv_A          246 VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK  293 (343)
T ss_dssp             TTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             CcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence            55444333   445554  6999999999999998 999999987544

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-31  Score=231.57  Aligned_cols=213  Identities=23%  Similarity=0.334  Sum_probs=177.5

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC--CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE--SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ..+.+|...|.++.|++++++|++|+.||.|++||+.  +.+.+..+.+|...|.+++|.+..++++|++++.||.|++|
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw   84 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW   84 (379)
T ss_dssp             CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred             EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence            4577899999999999999999999999999999997  56777888899999999998765558899999999999999


Q ss_pred             eCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961        137 DMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVA  214 (320)
Q Consensus       137 d~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~  214 (320)
                      |+.++...                         ....+.+|...|.+++|+|+  +.+|++++.|+.|++||++......
T Consensus        85 d~~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~  139 (379)
T 3jrp_A           85 KEENGRWS-------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS  139 (379)
T ss_dssp             EEETTEEE-------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred             EcCCCcee-------------------------EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence            98765411                         23445568889999999999  9999999999999999998764322


Q ss_pred             EEecCcceeeeEEEEEec-------------CCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeEEEECcC--
Q psy14961        215 CYKKDSILFGATSVDFSV-------------SGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSCLQVSPD--  275 (320)
Q Consensus       215 ~~~~~~~~~~~~~~~~s~-------------~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~i~~s~~--  275 (320)
                      ..........+.+++|+|             ++.+|++|+.||.|++||+...    .....+.+|...|.+++|+|+  
T Consensus       140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~  219 (379)
T 3jrp_A          140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL  219 (379)
T ss_dssp             EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred             eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence            221111122467899999             6999999999999999997653    345667889999999999999  


Q ss_pred             -CCeEEEecCCCceEeeecchH
Q psy14961        276 -GTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       276 -~~~l~s~s~D~~ir~~~~~~~  296 (320)
                       +++|++++.|++|++|+....
T Consensus       220 ~~~~l~s~~~dg~i~iwd~~~~  241 (379)
T 3jrp_A          220 LRSYLASVSQDRTCIIWTQDNE  241 (379)
T ss_dssp             SSEEEEEEETTSCEEEEEESST
T ss_pred             CCCeEEEEeCCCEEEEEeCCCC
Confidence             899999999999999997653

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.98  E-value=1.3e-28  Score=218.23  Aligned_cols=254  Identities=15%  Similarity=0.202  Sum_probs=199.8

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |++||..+++....+..+ ..+.+++|+|++++| ++++.|+.|++||+...    .....+..+ ..+.++.|++++++
T Consensus        14 v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~----~~~~~~~~~-~~v~~~~~spdg~~   87 (391)
T 1l0q_A           14 ISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN----NVIATVPAG-SSPQGVAVSPDGKQ   87 (391)
T ss_dssp             EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT----EEEEEEECS-SSEEEEEECTTSSE
T ss_pred             EEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCC----eEEEEEECC-CCccceEECCCCCE
Confidence            579999999888776655 458999999999977 67779999999997422    223333333 38899999999998


Q ss_pred             EEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         80 ILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        80 l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      +++++ .|+.|++||+.+++.+..+..+ ..+.++++  +++++.+ ++++.|+.|++||+.+++.+..+          
T Consensus        88 l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~----------  154 (391)
T 1l0q_A           88 VYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLAL--SPDGKKLYVTNNGDKTVSVINTVTKAVINTV----------  154 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEE----------
T ss_pred             EEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEE--CCCCCEEEEEeCCCCEEEEEECCCCcEEEEE----------
Confidence            76554 6799999999999887777644 45677766  4567777 68888999999998877654432          


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                                       ..+ ..+.+++|+|+++.+ ++++.|+.|++||+++++.........   .+..++|+|++++
T Consensus       155 -----------------~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~  213 (391)
T 1l0q_A          155 -----------------SVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTK  213 (391)
T ss_dssp             -----------------ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSE
T ss_pred             -----------------ecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC---CccceEECCCCCE
Confidence                             222 346889999999987 677889999999999987766555433   3567899999999


Q ss_pred             EEEEe---CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeE-EEecCCCceEeeecch
Q psy14961        237 LFAGY---NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF-SSGSWDTTLRDEESKN  295 (320)
Q Consensus       237 l~~g~---~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l-~s~s~D~~ir~~~~~~  295 (320)
                      |++++   .++.|.+||+.++..+..+..|. .+.+++|+|++++| ++++.|++|++|+...
T Consensus       214 l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~  275 (391)
T 1l0q_A          214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT  275 (391)
T ss_dssp             EEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             EEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence            99887   68999999999888888777765 47899999999877 7889999999999754

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.98  E-value=1.5e-30  Score=226.14  Aligned_cols=229  Identities=12%  Similarity=0.089  Sum_probs=187.2

Q ss_pred             cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc---eeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEe
Q psy14961         62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ---LLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWD  137 (320)
Q Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd  137 (320)
                      .+|...|.++.|++++++|++++.|+.|++|++.++.   ....+..|...|.++++.+  +++ .|++++.||.|++||
T Consensus         8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~~wd   85 (342)
T 1yfq_A            8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID--NTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE--SSSEEEEEEETTSCEEEEC
T ss_pred             cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC--CCCcEEEEEcCCCeEEEEE
Confidence            4789999999999999999999999999999998776   3445567999999999876  488 999999999999999


Q ss_pred             C-CCCcEEEEecc--CCcc--------------ccCCCeEEEEECcC---------CeeeeeecCCCCCeEEEEEcCCCC
Q psy14961        138 M-RTGYCVQSFEG--HHNL--------------ITDDKLVNIWDMRT---------GYCVQSFEGHQSDVNSVKFHPSGD  191 (320)
Q Consensus       138 ~-~~~~~~~~~~~--~~~~--------------~~~d~~i~iwd~~~---------~~~~~~~~~~~~~v~~v~~~p~g~  191 (320)
                      + ..+.. ..+.+  |...              .+.|+.|++||+++         ++++..+. |...|.+++|+|++ 
T Consensus        86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-  162 (342)
T 1yfq_A           86 LIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-  162 (342)
T ss_dssp             SSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred             eccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence            9 77654 34444  3322              13689999999988         77777776 88999999999987 


Q ss_pred             EEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEec-CCcEEEEEeCCCeEEEEcCCCC------eEEEEeecC
Q psy14961        192 AVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSV-SGRLLFAGYNDYTINVWDSLKC------CRVNHLMGH  263 (320)
Q Consensus       192 ~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~v~~wd~~~~------~~~~~~~~h  263 (320)
                       +++++.|+.|++||++. ...............+.+++|+| ++.++++|+.+|.|++|+....      .....+..|
T Consensus       163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~  241 (342)
T 1yfq_A          163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH  241 (342)
T ss_dssp             -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred             -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence             99999999999999987 44321111111123467899999 9999999999999999998765      666777777


Q ss_pred             CC---------ceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        264 EN---------RVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       264 ~~---------~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ..         .|.+++|+|++++|++|+.|++|++|+....
T Consensus       242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~  283 (342)
T 1yfq_A          242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR  283 (342)
T ss_dssp             CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred             cccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence            65         9999999999999999999999999997543

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.98  E-value=1.3e-29  Score=229.36  Aligned_cols=245  Identities=14%  Similarity=0.069  Sum_probs=192.4

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccC---Cccc-c--------------------------------------
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALED---DSSA-K--------------------------------------   57 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~---~~~~-~--------------------------------------   57 (320)
                      .++.+++|+|+|++|+++ .++.|++||+....   .... .                                      
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            457889999999976666 57899999975432   0000 0                                      


Q ss_pred             -----------cccccccccCeEEEEecCCCCEE-EEEeCCCeEEEEECC--Ccceeeecc--cCccceeEEEEeeCCCC
Q psy14961         58 -----------KKTVATHTSFISCCIFPNSDQQI-LTGSGDCTCALWDVE--SSQLLQSFH--GHTGELMDLDLAPSETG  121 (320)
Q Consensus        58 -----------~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~  121 (320)
                                 ......|...|.++.|++++++| ++++.||.|++||+.  +++.+..+.  .|...+.+++|.  +++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~  161 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA--EDD  161 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC--TTS
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc--CCC
Confidence                       00012345579999999999996 888899999999998  787777765  456788888775  468


Q ss_pred             CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC---CCEEEEeeC
Q psy14961        122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS---GDAVATGSD  198 (320)
Q Consensus       122 ~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~---g~~l~s~s~  198 (320)
                      ++|++++.+|.+++|++.++....                       .+...+.+|...|.+++|+|+   +++|++++.
T Consensus       162 ~~l~~~~~~g~v~~~~~~~~~~~~-----------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~  218 (450)
T 2vdu_B          162 TTVIIADKFGDVYSIDINSIPEEK-----------------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR  218 (450)
T ss_dssp             SEEEEEETTSEEEEEETTSCCCSS-----------------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEET
T ss_pred             CEEEEEeCCCcEEEEecCCccccc-----------------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcC
Confidence            999999999999999987654210                       022345678899999999999   999999999


Q ss_pred             CCeEEEEECCCCeeEeEEe-cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec---------------
Q psy14961        199 DATCRLFDLRADKEVACYK-KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG---------------  262 (320)
Q Consensus       199 dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~---------------  262 (320)
                      |+.|++||+++++.+..+. .+.  ..+.+++|+ ++.+|++|+.|+.|++||+.+++.+..+..               
T Consensus       219 d~~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (450)
T 2vdu_B          219 DEHIKISHYPQCFIVDKWLFGHK--HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP  295 (450)
T ss_dssp             TSCEEEEEESCTTCEEEECCCCS--SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred             CCcEEEEECCCCceeeeeecCCC--CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence            9999999999877665432 222  246789999 999999999999999999998887776652               


Q ss_pred             ----------CCCceeEEEECcCCCeEEEec-CCCceEeeec
Q psy14961        263 ----------HENRVSCLQVSPDGTAFSSGS-WDTTLRDEES  293 (320)
Q Consensus       263 ----------h~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~  293 (320)
                                +...|.+|+|+|++++|++++ .|++|++|+.
T Consensus       296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred             ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence                      245799999999999999998 8999999998

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=6.4e-32  Score=244.09  Aligned_cols=233  Identities=11%  Similarity=0.124  Sum_probs=186.8

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc-----CeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS-----FISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      |..+|.+++|+|+|.+||+++.||.+++|+...      ....+. |..     .+.+++|+|++++|++|+.||+|++|
T Consensus        84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW  156 (588)
T 2j04_A           84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF  156 (588)
T ss_dssp             CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred             CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence            468899999999999999999999999998421      233344 554     49999999999999999999999999


Q ss_pred             ECCCcce-------eeec----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE---EEEe-ccCCcc----
Q psy14961         93 DVESSQL-------LQSF----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---VQSF-EGHHNL----  153 (320)
Q Consensus        93 d~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---~~~~-~~~~~~----  153 (320)
                      |+.++..       +..+    .+|...|.+++|+|  +|  +++++.|+.+++||+..+..   ...+ .+|...    
T Consensus       157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP--dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv  232 (588)
T 2j04_A          157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE--DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL  232 (588)
T ss_dssp             ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET--TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred             ECCCCccccccceeeeeeecccccccccEEEEEEcC--Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence            9988753       4555    56778999998875  56  88899999999999987763   2344 234311    


Q ss_pred             --------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE--cCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        154 --------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF--HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       154 --------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~--~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                              .+.++.|++||+.+++......+|...|..++|  +|++..++++++||+ ++|..+.              
T Consensus       233 aFsg~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~--------------  297 (588)
T 2j04_A          233 KIVDYKVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE--------------  297 (588)
T ss_dssp             EEETTEEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS--------------
T ss_pred             EEECCEEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc--------------
Confidence                    234789999999988774444489999999999  999999999999999 9999771              


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                          +.|+|++..+++.  |+++++|+..... ...+. +...|.+++|||||+.+|+++.
T Consensus       298 ----~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~-~~~~I~~va~SPdG~~lA~~~~  350 (588)
T 2j04_A          298 ----LHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYE-TTLVIHGISLSPDGYSIAIVYD  350 (588)
T ss_dssp             ----EEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSC-CEEEEEEEEECTTSSEEEEEEE
T ss_pred             ----EEECCCceEEEEc--CCEEEEEECCCCc-eeeec-cceEEEEEEECCCCCEEEEEEe
Confidence                3489999888775  8999999875433 33333 3667999999999999999974

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.97  E-value=5.5e-30  Score=230.80  Aligned_cols=233  Identities=18%  Similarity=0.176  Sum_probs=176.2

Q ss_pred             ccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         61 VATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ...|...|+|+.|+| ++..|++|+.||+|+|||+.++..  ...+.+|.+.|.+++|+|. ++++|++++.||.|++||
T Consensus       115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd  193 (435)
T 4e54_B          115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTRLQD  193 (435)
T ss_dssp             EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEEEEE
T ss_pred             CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEee
Confidence            346778899999987 456899999999999999987653  4456789999999999764 578999999999999999


Q ss_pred             CCCCcEEEEeccCC--------------cc---ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCC
Q psy14961        138 MRTGYCVQSFEGHH--------------NL---ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDD  199 (320)
Q Consensus       138 ~~~~~~~~~~~~~~--------------~~---~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~d  199 (320)
                      ++++........+.              ..   .+.|+.|++||++ ++++..+.+|...|.+++|+|++. +|++|+.|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d  272 (435)
T 4e54_B          194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD  272 (435)
T ss_dssp             TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred             ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence            98764332222111              11   1368899999986 456778899999999999999976 68899999


Q ss_pred             CeEEEEECCCCeeEeEEec-CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC------ceeEEEE
Q psy14961        200 ATCRLFDLRADKEVACYKK-DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN------RVSCLQV  272 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~------~i~~i~~  272 (320)
                      +.|++||++..+....+.. ......+.+++|+|+|++|++|+.||.|++||+.++.....+.+|..      .+....|
T Consensus       273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (435)
T 4e54_B          273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW  352 (435)
T ss_dssp             SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred             ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence            9999999987654322211 11112467889999999999999999999999988777666666543      2334566


Q ss_pred             CcCCCeEEEec------------CCCceEeeecch
Q psy14961        273 SPDGTAFSSGS------------WDTTLRDEESKN  295 (320)
Q Consensus       273 s~~~~~l~s~s------------~D~~ir~~~~~~  295 (320)
                      +|++.++++++            .+++|++|+...
T Consensus       353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~  387 (435)
T 4e54_B          353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS  387 (435)
T ss_dssp             CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred             cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence            67666666554            346899999643

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=4.2e-30  Score=229.02  Aligned_cols=251  Identities=18%  Similarity=0.215  Sum_probs=195.8

Q ss_pred             CeEeeccccee----EEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcc---cccccccccccCeEEEE
Q psy14961          1 MIIWDGLTQTK----EHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSS---AKKKTVATHTSFISCCI   72 (320)
Q Consensus         1 ~~~W~~~~~~~----~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~---~~~~~~~~h~~~v~~~~   72 (320)
                      |+||+..+...    ...+..|...|.+++|+| ++++|++|+.||.|++|++.......   .....+.+|...|.++.
T Consensus        59 i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  138 (402)
T 2aq5_A           59 FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA  138 (402)
T ss_dssp             EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEE
T ss_pred             EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEE
Confidence            46899865432    223456888999999999 99999999999999999986432111   23456778999999999


Q ss_pred             ecCCC-CEEEEEeCCCeEEEEECCCcceeeec--ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-c
Q psy14961         73 FPNSD-QQILTGSGDCTCALWDVESSQLLQSF--HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-E  148 (320)
Q Consensus        73 ~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~  148 (320)
                      |++++ ..+++++.||.|++||+.+++.+..+  ..|...|.++++++  +++.|++++.|+.|++||+++++.+..+ .
T Consensus       139 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  216 (402)
T 2aq5_A          139 WHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR--DGALICTSCRDKRVRVIEPRKGTVVAEKDR  216 (402)
T ss_dssp             ECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             ECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC--CCCEEEEEecCCcEEEEeCCCCceeeeecc
Confidence            99987 68999999999999999999988888  78999999988865  6889999999999999999999888777 4


Q ss_pred             cCCcc---------------c----cCCCeEEEEECcCCee-eeee-cCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEE
Q psy14961        149 GHHNL---------------I----TDDKLVNIWDMRTGYC-VQSF-EGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFD  206 (320)
Q Consensus       149 ~~~~~---------------~----~~d~~i~iwd~~~~~~-~~~~-~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd  206 (320)
                      .|...               .    ..++.|++||++++.. .... ..|...+.+++|+|++++|+ +++.|+.|++||
T Consensus       217 ~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d  296 (402)
T 2aq5_A          217 PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFE  296 (402)
T ss_dssp             SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEE
T ss_pred             CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEE
Confidence            44321               1    2578999999988654 3222 25777899999999999986 555799999999


Q ss_pred             CCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        207 LRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       207 ~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      +.++++ +...........+.+++|+|++.++++  .++.+++|++.+..
T Consensus       297 ~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~  344 (402)
T 2aq5_A          297 ITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK  344 (402)
T ss_dssp             ECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred             ecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence            988763 322222211224678999999998875  45689999976643

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.97  E-value=5.7e-29  Score=215.63  Aligned_cols=230  Identities=17%  Similarity=0.249  Sum_probs=179.8

Q ss_pred             CeEeecccce----eEEEEEeCccceEEEEEcC--CCCEEEEecCCCeEEEEEecccCCcc-----cccccccccccCeE
Q psy14961          1 MIIWDGLTQT----KEHSVTMPATWVMACAYAP--SGSVVASGGLDNKVTVYAIALEDDSS-----AKKKTVATHTSFIS   69 (320)
Q Consensus         1 ~~~W~~~~~~----~~~~~~~~~~~V~~~~~~~--~~~~l~s~~~dg~i~v~~~~~~~~~~-----~~~~~~~~h~~~v~   69 (320)
                      |+|||..+..    ....+..|...|.+++|+|  ++++|++|+.||.|++||+.......     .....+..|...|.
T Consensus        35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (351)
T 3f3f_A           35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY  114 (351)
T ss_dssp             EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred             EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence            5799998763    4445567889999999999  69999999999999999986432211     23455678999999


Q ss_pred             EEEecCC--CCEEEEEeCCCeEEEEECCCcceeeecc-------------cCccceeEEEEeeC-CCCCEEEEEeCCCeE
Q psy14961         70 CCIFPNS--DQQILTGSGDCTCALWDVESSQLLQSFH-------------GHTGELMDLDLAPS-ETGNTFVSGSSDKLV  133 (320)
Q Consensus        70 ~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~-~~~~~l~s~~~dg~i  133 (320)
                      ++.|.++  +..+++++.||.|++||+.+++.+..+.             .|...+.+++++|. .++..+++++.|+.+
T Consensus       115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  194 (351)
T 3f3f_A          115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAI  194 (351)
T ss_dssp             EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEE
T ss_pred             EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcE
Confidence            9999998  8999999999999999998876544332             56778888888764 236799999999999


Q ss_pred             EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC----CEEEEeeCCCeEEEEECCC
Q psy14961        134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG----DAVATGSDDATCRLFDLRA  209 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g----~~l~s~s~dg~i~iwd~~~  209 (320)
                      .+|+...+..                         ..+..+.+|...|.+++|+|++    ++|++++.||.|++||++.
T Consensus       195 ~~~~~~~~~~-------------------------~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~  249 (351)
T 3f3f_A          195 IYQRGKDGKL-------------------------HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE  249 (351)
T ss_dssp             EEEECTTSCE-------------------------EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred             EEEccCCCce-------------------------eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence            8777655432                         1234566799999999999998    7999999999999999876


Q ss_pred             C----------------------------------------------eeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        210 D----------------------------------------------KEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       210 ~----------------------------------------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      +                                              +.+..+..+.  ..+.+++|+|++++|++|+.|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~d  327 (351)
T 3f3f_A          250 KLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN--GEVWSVSWNLTGTILSSAGDD  327 (351)
T ss_dssp             CC---------------------------------------CCSEEEEEEEEECTTS--SCEEEEEECSSSCCEEEEETT
T ss_pred             CcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc--ccEEEEEEcCCCCEEEEecCC
Confidence            4                                              1222222221  246889999999999999999


Q ss_pred             CeEEEEcCCCCeEE
Q psy14961        244 YTINVWDSLKCCRV  257 (320)
Q Consensus       244 g~v~~wd~~~~~~~  257 (320)
                      |.|++||+......
T Consensus       328 g~v~iw~~~~~~~~  341 (351)
T 3f3f_A          328 GKVRLWKATYSNEF  341 (351)
T ss_dssp             SCEEEEEECTTSCE
T ss_pred             CcEEEEecCcCcch
Confidence            99999998765433

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.97  E-value=1e-28  Score=216.78  Aligned_cols=224  Identities=13%  Similarity=0.103  Sum_probs=171.1

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeC
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDM  138 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~  138 (320)
                      ....|...|.++.|++++++|++|+.+ .+++|++++++.......  ..+..+++.+.  ++.+ ++++.|+.|++||+
T Consensus        14 ~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~d~~v~iWd~   88 (355)
T 3vu4_A           14 PENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEM--RHLSKVRMLHR--TNYVAFVTGVKEVVHIWDD   88 (355)
T ss_dssp             -----CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEEC--SCCCEEEECTT--SSEEEEECSSTTEEEEEET
T ss_pred             ccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeec--CCeEEEEEcCC--CCEEEEEECCccEEEEEEC
Confidence            456799999999999999999988866 478999988766544332  24566666554  4555 67888899999999


Q ss_pred             CCCcEEEEeccCC-----------ccccCCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcCCCCEEEE--eeCCCeEEE
Q psy14961        139 RTGYCVQSFEGHH-----------NLITDDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHPSGDAVAT--GSDDATCRL  204 (320)
Q Consensus       139 ~~~~~~~~~~~~~-----------~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p~g~~l~s--~s~dg~i~i  204 (320)
                      .+++.+..+..+.           ..+..++.|++||+.++ +.+..+..   +...++++|  .+++.  |+.||.|++
T Consensus        89 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i  163 (355)
T 3vu4_A           89 VKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI  163 (355)
T ss_dssp             TTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred             CCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence            9998877664322           22345789999999987 66666554   455677777  56655  688999999


Q ss_pred             EECCCCee----------------EeEEecCcceeeeEEEEEecCCcEEEEEeCCCe-EEEEcCCCCeEEEEee-c-CCC
Q psy14961        205 FDLRADKE----------------VACYKKDSILFGATSVDFSVSGRLLFAGYNDYT-INVWDSLKCCRVNHLM-G-HEN  265 (320)
Q Consensus       205 wd~~~~~~----------------~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~-v~~wd~~~~~~~~~~~-~-h~~  265 (320)
                      ||+++++.                +..+..+.  ..+.+++|+|+|++|++|+.|++ |++||+.++..+.++. + |..
T Consensus       164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~  241 (355)
T 3vu4_A          164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA  241 (355)
T ss_dssp             EECCC------------------CCEEECCCS--SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred             EECCCCCccccccccccccccCcccEEEEccC--CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence            99987541                23333332  24688999999999999999998 9999999999998888 5 999


Q ss_pred             ceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        266 RVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       266 ~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .|.+++|+||+++|++++.|++|++|+...
T Consensus       242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~  271 (355)
T 3vu4_A          242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFN  271 (355)
T ss_dssp             CEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred             cEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence            999999999999999999999999999754

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=1.7e-28  Score=216.11  Aligned_cols=202  Identities=12%  Similarity=0.144  Sum_probs=155.9

Q ss_pred             CccceEEEEEcCCCCEEEE--ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         18 PATWVMACAYAPSGSVVAS--GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s--~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      +..++.+++|+|||++|++  ++.|++|++||+...    .....+ .|...|.++.|+|+++++++++.| .+++|+..
T Consensus       132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~----~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~  205 (365)
T 4h5i_A          132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL----TEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTV  205 (365)
T ss_dssp             TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT----EEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETT
T ss_pred             cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC----cEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEec
Confidence            3457889999999998764  557899999997521    222233 477889999999999999998855 56666666


Q ss_pred             Ccceee--ecccCccceeEEEEeeCCCCCEEEEEeCCC----eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         96 SSQLLQ--SFHGHTGELMDLDLAPSETGNTFVSGSSDK----LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        96 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg----~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      +++.+.  ....|...+.+++|.|  ++..+++++.|+    .+++||+.......                       .
T Consensus       206 ~~~~~~~~~~~~~~~~v~~v~fsp--dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~-----------------------~  260 (365)
T 4h5i_A          206 TGSCIARKTDFDKNWSLSKINFIA--DDTVLIAASLKKGKGIVLTKISIKSGNTSV-----------------------L  260 (365)
T ss_dssp             TCCEEEEECCCCTTEEEEEEEEEE--TTEEEEEEEESSSCCEEEEEEEEETTEEEE-----------------------E
T ss_pred             cCcceeeeecCCCCCCEEEEEEcC--CCCEEEEEecCCcceeEEeecccccceecc-----------------------e
Confidence            665442  3456788898888876  578999998877    56777765443211                       1


Q ss_pred             eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe-cCcceeeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961        170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK-KDSILFGATSVDFSVSGRLLFAGYNDYTINV  248 (320)
Q Consensus       170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~  248 (320)
                      ....+.+|...|.+++|+|+|++||+|+.|++|+|||+++++.+..+. .+.  ..+.+++|+|||++||+|+.|++|+|
T Consensus       261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~--~~V~~v~fSpdg~~laS~S~D~tvrv  338 (365)
T 4h5i_A          261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS--FAITEVTISPDSTYVASVSAANTIHI  338 (365)
T ss_dssp             EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS--SCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred             eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc--CCEEEEEECCCCCEEEEEeCCCeEEE
Confidence            234466788999999999999999999999999999999998876653 232  24689999999999999999999999


Q ss_pred             EcCC
Q psy14961        249 WDSL  252 (320)
Q Consensus       249 wd~~  252 (320)
                      ||+.
T Consensus       339 w~ip  342 (365)
T 4h5i_A          339 IKLP  342 (365)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            9974

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=8.2e-29  Score=216.72  Aligned_cols=238  Identities=16%  Similarity=0.190  Sum_probs=188.4

Q ss_pred             CeEeeccc-ceeE-EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe--cCC
Q psy14961          1 MIIWDGLT-QTKE-HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF--PNS   76 (320)
Q Consensus         1 ~~~W~~~~-~~~~-~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~   76 (320)
                      |+|||..+ +... ..+..|...|.+++|+|++++|++++.||.|++||+...     ....+..|...|.++.|  +++
T Consensus        66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~v~~~~~~~~~~  140 (368)
T 3mmy_A           66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN-----QAIQIAQHDAPVKTIHWIKAPN  140 (368)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-----EEEEEEECSSCEEEEEEEECSS
T ss_pred             EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC-----CceeeccccCceEEEEEEeCCC
Confidence            57999987 4443 456678999999999999999999999999999998532     12235679999999999  888


Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---------
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---------  147 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~---------  147 (320)
                      +..+++++.||.|++||+.+++++..+..+. .+.++.+.    +..+++++.++.+++||++........         
T Consensus       141 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  215 (368)
T 3mmy_A          141 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI----YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH  215 (368)
T ss_dssp             CEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE----TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE
T ss_pred             CCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec----CCeeEEEeCCCcEEEEEeccccchhhhccccccCCC
Confidence            8899999999999999999998888877554 45444443    358899999999999999765322111         


Q ss_pred             ------ccC------CccccCCCeEEEEECcCC---eeeeeecCCCC------------CeEEEEEcCCCCEEEEeeCCC
Q psy14961        148 ------EGH------HNLITDDKLVNIWDMRTG---YCVQSFEGHQS------------DVNSVKFHPSGDAVATGSDDA  200 (320)
Q Consensus       148 ------~~~------~~~~~~d~~i~iwd~~~~---~~~~~~~~~~~------------~v~~v~~~p~g~~l~s~s~dg  200 (320)
                            ...      ....+.++.|++||++..   .....+.+|..            .|.+++|+|++++|++++.||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg  295 (368)
T 3mmy_A          216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG  295 (368)
T ss_dssp             EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS
T ss_pred             ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC
Confidence                  111      112246899999999887   55677777776            799999999999999999999


Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      .|++||+++++.+..+..+.  ..+.+++|+|+|++|++|+.|+..+.|+
T Consensus       296 ~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~g~~l~~~s~d~~~~~~~  343 (368)
T 3mmy_A          296 RFSFWDKDARTKLKTSEQLD--QPISACCFNHNGNIFAYASSYDWSKGHE  343 (368)
T ss_dssp             CEEEEETTTTEEEEECCCCS--SCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred             eEEEEECCCCcEEEEecCCC--CCceEEEECCCCCeEEEEeccccccccc
Confidence            99999999988876665433  2468899999999999999887655544

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.97  E-value=3.4e-28  Score=218.07  Aligned_cols=238  Identities=18%  Similarity=0.323  Sum_probs=189.1

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      +++.++|++++ +|++| .|++|+|||.....  ......+..|...|+++.|++++++|++|+.||+|++||+++++.+
T Consensus       107 y~~~l~wS~~n-~lAvg-ld~tV~lWd~~tg~--~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~  182 (420)
T 4gga_A          107 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL  182 (420)
T ss_dssp             TCBCEEECTTS-EEEEE-ETTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             cceeEEECCCC-EEEEE-eCCEEEEEECCCCC--EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence            56678999864 66665 59999999975321  1122234578889999999999999999999999999999999999


Q ss_pred             eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCC
Q psy14961        101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD  180 (320)
Q Consensus       101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  180 (320)
                      ..+.+|...+.++.+    ++..|++|+.|+.+++||.....                          ..+..+.+|...
T Consensus       183 ~~~~~h~~~v~~~s~----~~~~l~sgs~d~~i~~~d~~~~~--------------------------~~~~~~~~h~~~  232 (420)
T 4gga_A          183 RNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRVAE--------------------------HHVATLSGHSQE  232 (420)
T ss_dssp             EEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSS--------------------------CEEEEEECCSSC
T ss_pred             EEEeCCCCceEEEee----CCCEEEEEeCCCceeEeeecccc--------------------------eeeEEecccccc
Confidence            999999999887765    35799999999999999986532                          123445678899


Q ss_pred             eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE----eEEecCcceeeeEEEEEecCCc-EEEE--EeCCCeEEEEcCCC
Q psy14961        181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEV----ACYKKDSILFGATSVDFSVSGR-LLFA--GYNDYTINVWDSLK  253 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~-~l~~--g~~dg~v~~wd~~~  253 (320)
                      +..+.++|++.++++++.|+.+++|+...++..    .....+  ...+..++|+|.+. ++++  |+.|++|++||+.+
T Consensus       233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~--~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t  310 (420)
T 4gga_A          233 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS  310 (420)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC--SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred             eeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeeccc--CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence            999999999999999999999999999876432    111111  12357888999765 5555  45799999999999


Q ss_pred             CeEEEEeecCCCceeEEEECcCCCeEEEec--CCCceEeeecch
Q psy14961        254 CCRVNHLMGHENRVSCLQVSPDGTAFSSGS--WDTTLRDEESKN  295 (320)
Q Consensus       254 ~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s--~D~~ir~~~~~~  295 (320)
                      +.....+..| ..+.++.|+|+++.|++++  .|++|++|+..+
T Consensus       311 ~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~  353 (420)
T 4gga_A          311 GACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPT  353 (420)
T ss_dssp             TEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred             cccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence            9888777655 4688999999999988765  799999999743

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.97  E-value=1.7e-28  Score=217.86  Aligned_cols=282  Identities=15%  Similarity=0.207  Sum_probs=183.3

Q ss_pred             CeEeecccceeEEEEE-------------eCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccccccccccccc
Q psy14961          1 MIIWDGLTQTKEHSVT-------------MPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS   66 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~-------------~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~   66 (320)
                      |+|||..+........             .|...|.+++|+| ++.+|++++.||.|++|++...    .... ...+..
T Consensus        68 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~-~~~~~~  142 (408)
T 4a11_B           68 IVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL----QTAD-VFNFEE  142 (408)
T ss_dssp             EEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT----EEEE-EEECSS
T ss_pred             EEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC----ccce-eccCCC
Confidence            4799998776543332             3788999999999 7789999999999999998532    1122 223667


Q ss_pred             CeEEEEecCC---CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCCc
Q psy14961         67 FISCCIFPNS---DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        67 ~v~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~~  142 (320)
                      .+.++.+.+.   +..+++++.|+.|++||+.+++.+..+..|...|.+++++|  ++. .|++++.||.|++||++.+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~ll~~~~~dg~i~i~d~~~~~  220 (408)
T 4a11_B          143 TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP--RYDYILATASADSRVKLWDVRRAS  220 (408)
T ss_dssp             CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS--SCTTEEEEEETTSCEEEEETTCSS
T ss_pred             ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC--CCCcEEEEEcCCCcEEEEECCCCC
Confidence            7888888764   45899999999999999999998889999999999998865  455 68999999999999997653


Q ss_pred             -EEEEe---------------------------ccCCc---cccCCCeEEEEECcCCeeeeeecCCC-----CCeEEEEE
Q psy14961        143 -CVQSF---------------------------EGHHN---LITDDKLVNIWDMRTGYCVQSFEGHQ-----SDVNSVKF  186 (320)
Q Consensus       143 -~~~~~---------------------------~~~~~---~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~v~~  186 (320)
                       ++..+                           .+...   ....|+.|++||+++++......++.     ..+.....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (408)
T 4a11_B          221 GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVS  300 (408)
T ss_dssp             CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEEC
T ss_pred             cccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEe
Confidence             22222                           11111   11368899999999887655443321     12222222


Q ss_pred             cCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCc
Q psy14961        187 HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENR  266 (320)
Q Consensus       187 ~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~  266 (320)
                      ...+..+++++.|+.|++||+.+++.+..+..+..  .+.+++|+|++++|++|+.||.|++||..+.+++.....+.. 
T Consensus       301 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-  377 (408)
T 4a11_B          301 CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK--TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT-  377 (408)
T ss_dssp             CSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS--CEEEEEEETTTTEEEEEETTSCEEEEEECC-------------
T ss_pred             cCCCceEEEEecCCEEEEEECcCCcceeeeccCCC--eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe-
Confidence            33455677778899999999999888777664432  467899999999999999999999999888776654433322 


Q ss_pred             eeEEEECc-CCCeEEEecCCCceEeeecc
Q psy14961        267 VSCLQVSP-DGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       267 i~~i~~s~-~~~~l~s~s~D~~ir~~~~~  294 (320)
                        ...++| +...+.+++.|+.+++|+..
T Consensus       378 --~~~~~~~~~~~~~~~~~~~~~~~W~~~  404 (408)
T 4a11_B          378 --KSQLNPAFEDAWSSSDEEGGTSAWSHP  404 (408)
T ss_dssp             -----------------------------
T ss_pred             --ccccccccceeecccCccCceeecCCc
Confidence              233444 45567788899999999863

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.2e-29  Score=240.47  Aligned_cols=211  Identities=23%  Similarity=0.338  Sum_probs=174.8

Q ss_pred             cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC--CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE--SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      .+.+|.+.|.++.|+++++++++|+.||.|++||+.  ++..+..+.+|.+.|.++++.+..+++.|++|+.||.|++||
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   83 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence            467899999999999999999999999999999997  557778889999999999997765689999999999999999


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      +.++..                         .....+.+|...|.+++|+|+  ++.+++|+.||.|++||++.+.....
T Consensus        84 ~~~~~~-------------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~  138 (753)
T 3jro_A           84 EENGRW-------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP  138 (753)
T ss_dssp             EETTEE-------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred             CCCCcc-------------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence            876531                         123445678899999999999  99999999999999999987633221


Q ss_pred             EecCcceeeeEEEEEec-------------CCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeEEEECcC---
Q psy14961        216 YKKDSILFGATSVDFSV-------------SGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSCLQVSPD---  275 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~-------------~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~i~~s~~---  275 (320)
                      .........+.++.|+|             ++.++++|+.||.|++||+...    .....+.+|..+|++++|+|+   
T Consensus       139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~  218 (753)
T 3jro_A          139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL  218 (753)
T ss_dssp             EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred             eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence            11111123467899999             5899999999999999997665    556778899999999999999   


Q ss_pred             CCeEEEecCCCceEeeecch
Q psy14961        276 GTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       276 ~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +++|++|+.|++|++|+...
T Consensus       219 ~~~l~s~s~Dg~I~iwd~~~  238 (753)
T 3jro_A          219 RSYLASVSQDRTCIIWTQDN  238 (753)
T ss_dssp             SEEEEEEESSSCEEEEEESS
T ss_pred             CCEEEEEecCCEEEEecCCC
Confidence            99999999999999999755

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=4.5e-28  Score=217.98  Aligned_cols=251  Identities=18%  Similarity=0.265  Sum_probs=193.3

Q ss_pred             ceEEEEEcCCC----------CEEEEecC----CCeEEEEEecccCC----------------------c-ccccccccc
Q psy14961         21 WVMACAYAPSG----------SVVASGGL----DNKVTVYAIALEDD----------------------S-SAKKKTVAT   63 (320)
Q Consensus        21 ~V~~~~~~~~~----------~~l~s~~~----dg~i~v~~~~~~~~----------------------~-~~~~~~~~~   63 (320)
                      +..++.|.|+.          .+++.|..    .+.|.++++.+...                      . .........
T Consensus        47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  126 (430)
T 2xyi_A           47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN  126 (430)
T ss_dssp             CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred             CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence            44788888865          35666654    45688887642100                      0 011233457


Q ss_pred             cccCeEEEEecCC-CCEEEEEeCCCeEEEEECCC----------cceeeecccCccceeEEEEeeCCCCC-EEEEEeCCC
Q psy14961         64 HTSFISCCIFPNS-DQQILTGSGDCTCALWDVES----------SQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDK  131 (320)
Q Consensus        64 h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg  131 (320)
                      |...|.++.|.++ +.++++++.||.|++|++.+          ..++..+.+|...+.+++|.+.  +. .|++|+.||
T Consensus       127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg  204 (430)
T 2xyi_A          127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSASDDH  204 (430)
T ss_dssp             ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEECTTS
T ss_pred             CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEeCCC
Confidence            8999999999986 57889999999999999976          5667788899999999988654  55 999999999


Q ss_pred             eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCC
Q psy14961        132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRAD  210 (320)
Q Consensus       132 ~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~  210 (320)
                      .|++||+..+....            ..        ..+...+.+|...|.+++|+| ++..|++++.|+.|++||++.+
T Consensus       205 ~i~vwd~~~~~~~~------------~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~  264 (430)
T 2xyi_A          205 TICLWDINATPKEH------------RV--------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN  264 (430)
T ss_dssp             CEEEEETTSCCBGG------------GE--------EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred             eEEEEeCCCCCCCC------------ce--------eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence            99999998642100            00        012344567999999999999 6788999999999999999876


Q ss_pred             ---eeEeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCC-CeEEEEeecCCCceeEEEECcCCC-eEEEecC
Q psy14961        211 ---KEVACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLK-CCRVNHLMGHENRVSCLQVSPDGT-AFSSGSW  284 (320)
Q Consensus       211 ---~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~  284 (320)
                         +.+..+..+.  ..+.+++|+|++. ++++|+.||.|++||+.. ..++..+.+|...|.+++|+|+++ +|++++.
T Consensus       265 ~~~~~~~~~~~~~--~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~  342 (430)
T 2xyi_A          265 NTSKPSHTVDAHT--AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT  342 (430)
T ss_dssp             CSSSCSEEEECCS--SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred             CCCcceeEeecCC--CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC
Confidence               3333333322  2467899999987 789999999999999887 566788889999999999999985 6999999


Q ss_pred             CCceEeeecch
Q psy14961        285 DTTLRDEESKN  295 (320)
Q Consensus       285 D~~ir~~~~~~  295 (320)
                      |++|++|+...
T Consensus       343 d~~i~iwd~~~  353 (430)
T 2xyi_A          343 DRRLHVWDLSK  353 (430)
T ss_dssp             TSCCEEEEGGG
T ss_pred             CCcEEEEeCCC
Confidence            99999999765

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=1.8e-26  Score=207.14  Aligned_cols=269  Identities=10%  Similarity=0.084  Sum_probs=200.5

Q ss_pred             ccceEEEE---EcCCCCEEEEe--------------cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961         19 ATWVMACA---YAPSGSVVASG--------------GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus        19 ~~~V~~~~---~~~~~~~l~s~--------------~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      ...+..++   |+|++..++..              +.++.+.+|.++...........+..+ ..+.++.|++++..++
T Consensus        60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~  138 (433)
T 3bws_A           60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAI  138 (433)
T ss_dssp             TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEE
T ss_pred             CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEE
Confidence            34566777   88887766543              233334566554322211222333333 3455788888666677


Q ss_pred             EEeCCCeEEEEECCCcceee-----ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc---
Q psy14961         82 TGSGDCTCALWDVESSQLLQ-----SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL---  153 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~---  153 (320)
                      +++.|+.|++||+.+++...     .+.+|...+.++++.  +++..+++++.|+.|++||+.+++.+..+..+...   
T Consensus       139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~  216 (433)
T 3bws_A          139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP--EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI  216 (433)
T ss_dssp             EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG--GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred             EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc--CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence            77788999999999988776     455788889888874  46789999999999999999988877666543321   


Q ss_pred             -----------c--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee--------CCCeEEEEECCCCee
Q psy14961        154 -----------I--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS--------DDATCRLFDLRADKE  212 (320)
Q Consensus       154 -----------~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s--------~dg~i~iwd~~~~~~  212 (320)
                                 +  ..++.|++||+++++.+..+..+ ..+.+++|+|+|+.+++++        .|+.|++||+++++.
T Consensus       217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~  295 (433)
T 3bws_A          217 LLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL  295 (433)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred             EEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence                       1  25789999999999888877654 4589999999999998887        588999999998876


Q ss_pred             EeEEecCcceeeeEEEEEecCCcEE-EEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC-------
Q psy14961        213 VACYKKDSILFGATSVDFSVSGRLL-FAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-------  284 (320)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-------  284 (320)
                      ........   .+..++|+|+++.+ ++++.++.|.+||..+++.+..+. +...+.+++|+|+|++|++++.       
T Consensus       296 ~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~  371 (433)
T 3bws_A          296 IDTIGPPG---NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTE  371 (433)
T ss_dssp             EEEEEEEE---CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred             EeeccCCC---CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcccc
Confidence            65543222   35678999999755 666899999999998887776554 7788999999999998888876       


Q ss_pred             --------CCceEeeecch
Q psy14961        285 --------DTTLRDEESKN  295 (320)
Q Consensus       285 --------D~~ir~~~~~~  295 (320)
                              ||.|++|+...
T Consensus       372 ~~~~~g~~dg~v~~~d~~~  390 (433)
T 3bws_A          372 GYLKKGLVLGKVYVIDTTT  390 (433)
T ss_dssp             CTTSCCSSCCEEEEEETTT
T ss_pred             ccccccccceEEEEEECCC
Confidence                    57999999744

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.96  E-value=3.3e-28  Score=216.34  Aligned_cols=247  Identities=17%  Similarity=0.160  Sum_probs=154.5

Q ss_pred             EEEEE---cCCCCEEEEecCCCeEEEEEecccCCcccc---cc--cc--------------------cccccCeEEEEec
Q psy14961         23 MACAY---APSGSVVASGGLDNKVTVYAIALEDDSSAK---KK--TV--------------------ATHTSFISCCIFP   74 (320)
Q Consensus        23 ~~~~~---~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~---~~--~~--------------------~~h~~~v~~~~~~   74 (320)
                      .++.|   +|++..+++++.++.|.+|+...+......   ..  ..                    ..|...+....++
T Consensus        19 ~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (393)
T 4gq1_A           19 YTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSP   98 (393)
T ss_dssp             EEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CC
T ss_pred             eEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecC
Confidence            45555   445555566666888999987532211100   00  00                    1122222233344


Q ss_pred             CCCCEEEEEeCCCeEEEEECCCcce-----eeecccCccceeEEEEeeC------CCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         75 NSDQQILTGSGDCTCALWDVESSQL-----LQSFHGHTGELMDLDLAPS------ETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        75 ~~~~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~~------~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      +++..+++++.|++|++||++++..     +..+.+|.+.|.+++|.|.      .++++|++++.|++|++||++++..
T Consensus        99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~  178 (393)
T 4gq1_A           99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP  178 (393)
T ss_dssp             EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence            4556799999999999999987653     3457899999999999862      2678999999999999999866543


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEeEEecC---
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVACYKKD---  219 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~---  219 (320)
                      +                           ..+.+|..+|.+++|+|++. +|++++.|++|++||+++++........   
T Consensus       179 ~---------------------------~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~  231 (393)
T 4gq1_A          179 I---------------------------LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV  231 (393)
T ss_dssp             E---------------------------EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred             e---------------------------eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence            2                           33345778899999999875 7999999999999999876543221100   


Q ss_pred             --------------------cceeeeEEEEEe-cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc----
Q psy14961        220 --------------------SILFGATSVDFS-VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP----  274 (320)
Q Consensus       220 --------------------~~~~~~~~~~~s-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~----  274 (320)
                                          .....+..+.|+ |+++.|++++.|+++++||+........+..|...+..+.+.|    
T Consensus       232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~  311 (393)
T 4gq1_A          232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQG  311 (393)
T ss_dssp             SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEE
T ss_pred             ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccc
Confidence                                000123456776 8999999999999999999887666655655555554444433    


Q ss_pred             ----------------CCCeEEEecCCCceEeeecchH
Q psy14961        275 ----------------DGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       275 ----------------~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                                      ++.++++|+.|++|++|+....
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~  349 (393)
T 4gq1_A          312 ISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK  349 (393)
T ss_dssp             ECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT
T ss_pred             ccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC
Confidence                            3446788999999999997544

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.96  E-value=5.8e-27  Score=199.73  Aligned_cols=210  Identities=17%  Similarity=0.125  Sum_probs=144.6

Q ss_pred             ccceEEEEEcCC----CCEEEEecC--------------------CCeEEEEEecccCCcccccccccccccCeEEEEec
Q psy14961         19 ATWVMACAYAPS----GSVVASGGL--------------------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP   74 (320)
Q Consensus        19 ~~~V~~~~~~~~----~~~l~s~~~--------------------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~   74 (320)
                      -..|.+++|+||    ++.+++++.                    |+.|++|++...   ......+..|...+..+.|+
T Consensus       111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d---G~~~~s~~~~~~~v~~l~fs  187 (356)
T 2w18_A          111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED---GGGKENQFLMPPEETILTFA  187 (356)
T ss_dssp             EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT---SCEEEEEEECCCSSCEEEEE
T ss_pred             ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC---CceeeeeccCCCceeeEEee
Confidence            346778888888    777776553                    788888887422   22334556788888888887


Q ss_pred             C---CCCEEEEEeCCCeEEEEECCCcceeeecccCcc---ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         75 N---SDQQILTGSGDCTCALWDVESSQLLQSFHGHTG---ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        75 ~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      +   ++..|++|+.|++|+|||+.+++++..+.+|..   .+.+++|+|  +|.++++++.+..  +|++.++       
T Consensus       188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp--dG~~lvs~s~~~~--~w~laSG-------  256 (356)
T 2w18_A          188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE--MGLLFIVLSHPCA--KESESLR-------  256 (356)
T ss_dssp             EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE--TTEEEEEEC--------------------
T ss_pred             ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC--CCCEEEEeccCCC--cceeecc-------
Confidence            7   678999999999999999999999999876543   455556765  5778776665433  3555544       


Q ss_pred             cCCccccCCCeEEEEECcCCeeeeee-----cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        149 GHHNLITDDKLVNIWDMRTGYCVQSF-----EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       149 ~~~~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                            ..|+++++||..+++++..+     .+|...+.+.+++  +..+++++.|++|+|||+.+++.+..+..+... 
T Consensus       257 ------s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~-  327 (356)
T 2w18_A          257 ------SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ-  327 (356)
T ss_dssp             -------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--C-
T ss_pred             ------CCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC-
Confidence                  24666677777766655443     3566555444444  788999999999999999999988777644321 


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      ....++|+|||++|++|+.|++|++||.
T Consensus       328 vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            1245899999999999999999999984

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.95  E-value=7.5e-25  Score=193.94  Aligned_cols=254  Identities=14%  Similarity=0.123  Sum_probs=191.0

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEE-ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVAS-GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s-~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |++||..+++....+..+ ..+.+++|+|++++|+. ++.++.|++||+...    .....+. +...+.++.|+++++.
T Consensus        56 i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~  129 (391)
T 1l0q_A           56 VSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN----TVAGTVK-TGKSPLGLALSPDGKK  129 (391)
T ss_dssp             EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEE-CSSSEEEEEECTTSSE
T ss_pred             EEEEECCCCeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCC----eEEEEEe-CCCCcceEEECCCCCE
Confidence            479999998887766655 48999999999998754 556799999998532    2222233 3356789999999987


Q ss_pred             E-EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         80 I-LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        80 l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      + ++++.|+.|++||+.+++.+..+..+ ..+..+++  +++++.+ ++++.++.|++||+++++.+..+          
T Consensus       130 l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~--~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~----------  196 (391)
T 1l0q_A          130 LYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAV--TPDGTKVYVANFDSMSISVIDTVTNSVIDTV----------  196 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEE----------
T ss_pred             EEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEE--CCCCCEEEEEeCCCCEEEEEECCCCeEEEEE----------
Confidence            7 67778999999999999888777654 44566666  4567777 57788899999999876544332          


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                                       . +...+.+++|+|+|+++++++   .++.|++||+.+++.+..+..+.   .+..++|+|++
T Consensus       197 -----------------~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg  255 (391)
T 1l0q_A          197 -----------------K-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP---DPAGIAVTPDG  255 (391)
T ss_dssp             -----------------E-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS---SEEEEEECTTS
T ss_pred             -----------------e-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC---CccEEEEccCC
Confidence                             1 334678999999999998887   68999999999888776665543   24678999999


Q ss_pred             cEE-EEEeCCCeEEEEcCCCCeEEEEeecCCCcee---EEEEC------------cCC----------CeEEEecCCCce
Q psy14961        235 RLL-FAGYNDYTINVWDSLKCCRVNHLMGHENRVS---CLQVS------------PDG----------TAFSSGSWDTTL  288 (320)
Q Consensus       235 ~~l-~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~---~i~~s------------~~~----------~~l~s~s~D~~i  288 (320)
                      ++| ++++.++.|++||+.+++.+..+..|..+..   .+.+.            .+.          ..|.+.+.|.+.
T Consensus       256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~  335 (391)
T 1l0q_A          256 KKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATE  335 (391)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSE
T ss_pred             CEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceE
Confidence            977 5667899999999999888888776655421   12322            221          347777889999


Q ss_pred             Eeeecc
Q psy14961        289 RDEESK  294 (320)
Q Consensus       289 r~~~~~  294 (320)
                      ++|+..
T Consensus       336 ~~W~~~  341 (391)
T 1l0q_A          336 WKWDFG  341 (391)
T ss_dssp             EEEECS
T ss_pred             EEEECC
Confidence            999963

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.95  E-value=4.4e-25  Score=203.81  Aligned_cols=288  Identities=14%  Similarity=0.100  Sum_probs=209.6

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC----C
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN----S   76 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~   76 (320)
                      |.+||..+++....+..+.. +..++|+|||++|++++.|+.|++||+...  ......++. +......+.|++    +
T Consensus       161 V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~--t~~~~~~i~-~g~~p~~va~sp~~~~d  236 (543)
T 1nir_A          161 IALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAK--EPTKVAEIK-IGIEARSVESSKFKGYE  236 (543)
T ss_dssp             EEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSS--SCEEEEEEE-CCSEEEEEEECCSTTCT
T ss_pred             EEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCC--CCcEEEEEe-cCCCcceEEeCCCcCCC
Confidence            46899999988877764433 889999999999999999999999998311  122233343 344568899999    9


Q ss_pred             CCEEEEEeC-CCeEEEEECCCcceeeecccC----------cc-ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961         77 DQQILTGSG-DCTCALWDVESSQLLQSFHGH----------TG-ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV  144 (320)
Q Consensus        77 ~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~  144 (320)
                      ++++++++. +++|.+||..+++++..+..+          .+ .+..+.+++. ...++++...++.|.+||+.+...+
T Consensus       237 g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~-~~~~~vs~~~~g~i~vvd~~~~~~l  315 (543)
T 1nir_A          237 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE-HPEFIVNVKETGKVLLVNYKDIDNL  315 (543)
T ss_dssp             TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS-SSEEEEEETTTTEEEEEECTTSSSC
T ss_pred             CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC-CCEEEEEECCCCeEEEEEecCCCcc
Confidence            999998884 899999999999888776542          22 4556665443 2346667788999999999775432


Q ss_pred             E--Ee-----------ccCCc--cc--cCCCeEEEEECcCCeeeeeecC----CCCCeEEEEEcCC-CCEEEEee-CCCe
Q psy14961        145 Q--SF-----------EGHHN--LI--TDDKLVNIWDMRTGYCVQSFEG----HQSDVNSVKFHPS-GDAVATGS-DDAT  201 (320)
Q Consensus       145 ~--~~-----------~~~~~--~~--~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~p~-g~~l~s~s-~dg~  201 (320)
                      .  .+           .....  .+  ..++.|.+||..+++++..+..    |......+ ++|+ |..+++++ .|++
T Consensus       316 ~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~  394 (543)
T 1nir_A          316 TVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS  394 (543)
T ss_dssp             EEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred             eeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce
Confidence            2  22           11111  11  2467899999999998887764    55444343 5787 55667765 6899


Q ss_pred             EEEEECCC-------CeeEeEEecCcceeeeEEEEEecCCcEEEEEe-------CCCeEEEEcCCCCeEE-EEe------
Q psy14961        202 CRLFDLRA-------DKEVACYKKDSILFGATSVDFSVSGRLLFAGY-------NDYTINVWDSLKCCRV-NHL------  260 (320)
Q Consensus       202 i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-------~dg~v~~wd~~~~~~~-~~~------  260 (320)
                      |.+||..+       .+.+..++.+..  +...++|+|+|++|++++       .+++|.+||..+.+.. ..+      
T Consensus       395 V~v~d~~~~~~~~~~~~~v~~l~~~g~--~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~  472 (543)
T 1nir_A          395 ISLIGTDPKNHPQYAWKKVAELQGQGG--GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA  472 (543)
T ss_dssp             EEEEECCTTTCTTTBTSEEEEEECSCS--CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHH
T ss_pred             EEEEEeCCCCCchhcCeEEEEEEcCCC--CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhc
Confidence            99999987       566665554321  235688999999999987       2679999999877655 332      


Q ss_pred             --ecCCCceeEEEECcCCCeEEEec-----CCCceEeeecchH
Q psy14961        261 --MGHENRVSCLQVSPDGTAFSSGS-----WDTTLRDEESKNR  296 (320)
Q Consensus       261 --~~h~~~i~~i~~s~~~~~l~s~s-----~D~~ir~~~~~~~  296 (320)
                        ..|...+..++|+|||+.+..+.     .|++|.+||.++.
T Consensus       473 ~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~  515 (543)
T 1nir_A          473 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL  515 (543)
T ss_dssp             CCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             ccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence              35677899999999999988663     4899999997554

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=1.3e-25  Score=201.01  Aligned_cols=255  Identities=11%  Similarity=0.067  Sum_probs=189.5

Q ss_pred             CeEeec--ccceeEE--EEEeCccceEEEEEcC--------------CCCEEEEecCC------CeEEEEEecccCCccc
Q psy14961          1 MIIWDG--LTQTKEH--SVTMPATWVMACAYAP--------------SGSVVASGGLD------NKVTVYAIALEDDSSA   56 (320)
Q Consensus         1 ~~~W~~--~~~~~~~--~~~~~~~~V~~~~~~~--------------~~~~l~s~~~d------g~i~v~~~~~~~~~~~   56 (320)
                      ++|||.  .+++.+.  .+..|...+..+++++              .+..++.++.+      +.|++||++.     .
T Consensus        95 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-----~  169 (415)
T 2hqs_A           95 YQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-----Y  169 (415)
T ss_dssp             EEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-----C
T ss_pred             EEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-----C
Confidence            479999  8887663  3667777777766664              25677776654      7999999852     2


Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCC---eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCe
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDC---TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKL  132 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~  132 (320)
                      ....+..|...+.++.|+|+++.|++++.++   .|++||+.+++.. .+..|...+.+++|  +|+|+.|+ +++.++.
T Consensus       170 ~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~--spdg~~la~~~~~~g~  246 (415)
T 2hqs_A          170 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAF--SPDGSKLAFALSKTGS  246 (415)
T ss_dssp             SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEE--CTTSSEEEEEECTTSS
T ss_pred             CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEE--cCCCCEEEEEEecCCC
Confidence            2345667888999999999999999999875   9999999988765 45567777877777  45788777 6666554


Q ss_pred             --EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEEC
Q psy14961        133 --VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDL  207 (320)
Q Consensus       133 --i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~  207 (320)
                        |++||+.+++.                            ..+..|...+.+++|+|+|++|++++. ++  .|.+||+
T Consensus       247 ~~i~~~d~~~~~~----------------------------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~  298 (415)
T 2hqs_A          247 LNLYVMDLASGQI----------------------------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI  298 (415)
T ss_dssp             CEEEEEETTTCCE----------------------------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred             ceEEEEECCCCCE----------------------------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence              77777765432                            223456678899999999999988876 45  6788898


Q ss_pred             CCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961        208 RADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                      .+++... .....  ..+..++|+|+|++|++++.+   +.|.+||..++.. ..+..|. .+.+++|+|||++|++++.
T Consensus       299 ~~~~~~~-l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~  373 (415)
T 2hqs_A          299 NGGAPQR-ITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSS  373 (415)
T ss_dssp             TSSCCEE-CCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred             CCCCEEE-EecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence            8765432 22221  134678999999999988754   5899999887655 3455554 8999999999999999998


Q ss_pred             CC---ceEeeecchH
Q psy14961        285 DT---TLRDEESKNR  296 (320)
Q Consensus       285 D~---~ir~~~~~~~  296 (320)
                      |+   .|++|+....
T Consensus       374 ~~~~~~l~~~d~~g~  388 (415)
T 2hqs_A          374 QGMGSVLNLVSTDGR  388 (415)
T ss_dssp             ETTEEEEEEEETTSC
T ss_pred             CCCccEEEEEECCCC
Confidence            87   7999986543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.94  E-value=3.2e-24  Score=198.08  Aligned_cols=261  Identities=11%  Similarity=0.040  Sum_probs=197.9

Q ss_pred             EEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC--CCcceeeec
Q psy14961         26 AYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV--ESSQLLQSF  103 (320)
Q Consensus        26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~~  103 (320)
                      +|+|++.++++++.|++|.+||....    .....+..+.. +.++.|+++++++++++.|++|++||+  .+++.+..+
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~----~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i  218 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSK----KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI  218 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTC----CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCc----eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE
Confidence            38999999999999999999987532    22334442222 778999999999999999999999999  788888777


Q ss_pred             ccCccceeEEEEeeCC----CCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCC----------c------cc--------
Q psy14961        104 HGHTGELMDLDLAPSE----TGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHH----------N------LI--------  154 (320)
Q Consensus       104 ~~~~~~v~~~~~~~~~----~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~----------~------~~--------  154 (320)
                      .. ......+++  ++    +|+++++++ .++.|.+||..+++++..+..+.          .      ..        
T Consensus       219 ~~-g~~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~  295 (543)
T 1nir_A          219 KI-GIEARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI  295 (543)
T ss_dssp             EC-CSEEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred             ec-CCCcceEEe--CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence            73 445666766  55    789999888 48999999999988877664311          1      00        


Q ss_pred             ---cCCCeEEEEECcCCeeee--eecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcc-ee-eeE
Q psy14961        155 ---TDDKLVNIWDMRTGYCVQ--SFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSI-LF-GAT  226 (320)
Q Consensus       155 ---~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~-~~-~~~  226 (320)
                         ..++.|.+||..+.+.+.  .+. +...+..++|+|+|++|+++ ..+++|.+||+.+++.+..+..... .. ...
T Consensus       296 vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~  374 (543)
T 1nir_A          296 VNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA  374 (543)
T ss_dssp             EEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred             EEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence               246789999998765433  333 55567889999999987655 5689999999999987766553211 11 111


Q ss_pred             EEEEecC-CcEEEEEe-CCCeEEEEcCCC-------CeEEEEeecCCCceeEEEECcCCCeEEEec-------CCCceEe
Q psy14961        227 SVDFSVS-GRLLFAGY-NDYTINVWDSLK-------CCRVNHLMGHENRVSCLQVSPDGTAFSSGS-------WDTTLRD  290 (320)
Q Consensus       227 ~~~~s~~-~~~l~~g~-~dg~v~~wd~~~-------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s-------~D~~ir~  290 (320)
                      . .++|+ +..++++. .+++|.+||+.+       .+.+.++.+|...+..|+|+|||++|++++       .+++|++
T Consensus       375 ~-~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v  453 (543)
T 1nir_A          375 N-FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV  453 (543)
T ss_dssp             E-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred             c-cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence            2 25787 66667765 589999999887       788899999999999999999999999997       3789999


Q ss_pred             eecchH
Q psy14961        291 EESKNR  296 (320)
Q Consensus       291 ~~~~~~  296 (320)
                      ||..+.
T Consensus       454 ~d~~~~  459 (543)
T 1nir_A          454 FDLKNL  459 (543)
T ss_dssp             EETTCT
T ss_pred             EECCCC
Confidence            997543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.94  E-value=1.1e-23  Score=188.38  Aligned_cols=235  Identities=13%  Similarity=0.079  Sum_probs=176.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCC---eEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDN---KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg---~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |++||.... ....+..|...|.+++|+|+|++|++++.++   .|++||+....     ...+..|...+.++.|+|++
T Consensus       161 i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-----~~~l~~~~~~~~~~~~spdg  234 (415)
T 2hqs_A          161 LRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-----VRQVASFPRHNGAPAFSPDG  234 (415)
T ss_dssp             EEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEEEECCSSCEEEEEECTTS
T ss_pred             EEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-----EEEeecCCCcccCEEEcCCC
Confidence            468998743 3445666778999999999999999999875   99999985321     12455677889999999999


Q ss_pred             CEEE-EEeCCCe--EEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC--eEEEEeCCCCcEEEEeccCC
Q psy14961         78 QQIL-TGSGDCT--CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK--LVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        78 ~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg--~i~lwd~~~~~~~~~~~~~~  151 (320)
                      +.|+ +++.|+.  |++||+.+++. ..+..|...+..++|  +|+|+.|++++. ++  .|.+||+.+++.        
T Consensus       235 ~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~--spdg~~l~~~s~~~g~~~i~~~d~~~~~~--------  303 (415)
T 2hqs_A          235 SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTW--FPDSQNLAFTSDQAGRPQVYKVNINGGAP--------  303 (415)
T ss_dssp             SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEE--CTTSSEEEEEECTTSSCEEEEEETTSSCC--------
T ss_pred             CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEE--CCCCCEEEEEECCCCCcEEEEEECCCCCE--------
Confidence            9877 6666654  99999988775 456667777877777  557888888776 34  566667655431        


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC---CeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD---ATCRLFDLRADKEVACYKKDSILFGATSV  228 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~  228 (320)
                                          ..+..+...+.+++|+|+|++|++++.+   ..|.+||+.+++... .....   .+..+
T Consensus       304 --------------------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~---~~~~~  359 (415)
T 2hqs_A          304 --------------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTF---LDETP  359 (415)
T ss_dssp             --------------------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSS---SCEEE
T ss_pred             --------------------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCC---CcCCe
Confidence                                1122355578899999999999888764   589999999876543 22221   45788


Q ss_pred             EEecCCcEEEEEeCCC---eEEEEcCCCCeEEEEeecCCCceeEEEECcCCC
Q psy14961        229 DFSVSGRLLFAGYNDY---TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT  277 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~  277 (320)
                      +|+|+|++|++++.++   .|.+||+. +.....+.+|.+.|.+++|+|...
T Consensus       360 ~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          360 SLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             EECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred             EEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence            9999999999988766   79999976 445667889999999999999654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.93  E-value=1.1e-22  Score=176.14  Aligned_cols=267  Identities=13%  Similarity=0.098  Sum_probs=177.2

Q ss_pred             CeEeecc-cce-eEEEEEeCccceEEEEEcCCCCEEEEecCC-CeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGL-TQT-KEHSVTMPATWVMACAYAPSGSVVASGGLD-NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~-~~~-~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d-g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |.+||.. +++ .......+...+..++|+|+|++|++++.+ +.|.+|+++...........+..+. .+..+.|++++
T Consensus        17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg   95 (343)
T 1ri6_A           17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQG   95 (343)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTS
T ss_pred             EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCC
Confidence            4689884 232 122223355678899999999998888876 9999999863222222222333333 67889999999


Q ss_pred             CEEEEEeC-CCeEEEEEC---CCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCC-CcEEEEeccCC
Q psy14961         78 QQILTGSG-DCTCALWDV---ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRT-GYCVQSFEGHH  151 (320)
Q Consensus        78 ~~l~s~~~-dg~v~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~-~~~~~~~~~~~  151 (320)
                      +.+++++. ++.|.+||+   .+...+..+..+ ..+.++++  +++++.+++++ .++.|.+||+.+ +........  
T Consensus        96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--  170 (343)
T 1ri6_A           96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI--SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA--  170 (343)
T ss_dssp             SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE--CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--
T ss_pred             CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE--CCCCCEEEEecCCCCEEEEEEecCCCceeeeccc--
Confidence            98877765 889999999   334444444433 34666666  45688888776 889999999876 432111000  


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCC--Cee--EeEEecCcc----e
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRA--DKE--VACYKKDSI----L  222 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~--~~~--~~~~~~~~~----~  222 (320)
                                .+          .......+..++|+|+|++++++ ..++.+.+||++.  ++.  .........    .
T Consensus       171 ----------~~----------~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~  230 (343)
T 1ri6_A          171 ----------EV----------TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT  230 (343)
T ss_dssp             ----------EE----------ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred             ----------cc----------ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence                      00          01122357789999999977554 4789999999954  322  112211111    1


Q ss_pred             eeeEEEEEecCCcEEEEEe-CCCeEEEEcCC----CCeEEEEeecCCCceeEEEECcCCCeEEEec-CCCceEeeecc
Q psy14961        223 FGATSVDFSVSGRLLFAGY-NDYTINVWDSL----KCCRVNHLMGHENRVSCLQVSPDGTAFSSGS-WDTTLRDEESK  294 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~----~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~~  294 (320)
                      ..+..++|+|+|++|+++. .++.|.+||..    ....+..+..+.. +.+++|+|+|++|++++ .|+.+++|+..
T Consensus       231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d  307 (343)
T 1ri6_A          231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV  307 (343)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred             CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence            2345789999999887554 78999999987    3344555555544 89999999999877777 68999999653

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=8.2e-24  Score=179.08  Aligned_cols=248  Identities=15%  Similarity=0.149  Sum_probs=175.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecc-cCCccccccccccc-ccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIAL-EDDSSAKKKTVATH-TSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~-~~~~~~~~~~~~~h-~~~v~~~~~~~~~~   78 (320)
                      |++||..+++.. .+..+...|.+++|+|+|++|++++ ++.|.+||+.. ..    .......+ ...+.++.|+++++
T Consensus        24 i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~   97 (297)
T 2ojh_A           24 IEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISPDGA   97 (297)
T ss_dssp             EEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECTTSS
T ss_pred             EEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC----ceEeccccccccccceEECCCCC
Confidence            468999887765 3445678899999999999999986 78999999854 22    11222233 36778899999999


Q ss_pred             EEEEEe--CCCeEEEE--ECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         79 QILTGS--GDCTCALW--DVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        79 ~l~s~~--~dg~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                      .+++++  .++..+||  ++.++.. ..+..+ ..+..+++  +++++.|+ +++.++.+++|++...            
T Consensus        98 ~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~--spdg~~l~~~~~~~~~~~l~~~~~~------------  161 (297)
T 2ojh_A           98 LYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGW--SPDGKSFTYCGIRDQVFDIYSMDID------------  161 (297)
T ss_dssp             EEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEE--CTTSSEEEEEEEETTEEEEEEEETT------------
T ss_pred             EEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEE--CCCCCEEEEEECCCCceEEEEEECC------------
Confidence            999988  33455555  4454443 333333 33666666  55688777 7778888888875321            


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECC-CCeeEeEEecCcceeeeEEEEEe
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLR-ADKEVACYKKDSILFGATSVDFS  231 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~s  231 (320)
                                   ++ ....+..|...+.+++|+|+|+.++.++ .++.+++|+++ .+.....+..+.  ..+..+.|+
T Consensus       162 -------------~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~s  225 (297)
T 2ojh_A          162 -------------SG-VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA--YGDWFPHPS  225 (297)
T ss_dssp             -------------TC-CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS--EEEEEEEEC
T ss_pred             -------------CC-cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC--cccCCeEEC
Confidence                         01 1122334667889999999999887665 58999999876 333333333222  245678999


Q ss_pred             cCCcEEEEEeCC-----------CeEEEEcCCCCeE--EEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        232 VSGRLLFAGYND-----------YTINVWDSLKCCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       232 ~~~~~l~~g~~d-----------g~v~~wd~~~~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      |+|++|++++.+           +.|.+||+.++..  +..+.+|...+.+++|+||++.|++++.|.
T Consensus       226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            999999888765           5699999876543  455568889999999999999999888764

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.92  E-value=3.9e-22  Score=172.46  Aligned_cols=265  Identities=11%  Similarity=0.087  Sum_probs=182.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |.+||..+++.......+...+ .++|+|+|++|++++. ++.|.+||+.....   ....+..+..+..++.|++++++
T Consensus        22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~   97 (331)
T 3u4y_A           22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP---KVVAIQEGQSSMADVDITPDDQF   97 (331)
T ss_dssp             EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC---EEEEEEECSSCCCCEEECTTSSE
T ss_pred             EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce---eEEecccCCCCccceEECCCCCE
Confidence            4689999888877666666666 9999999997766655 88999999853221   12334455555555889999999


Q ss_pred             EEEEeCCC---eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCe-EEEEeCCCCcEEEEeccCCccc
Q psy14961         80 ILTGSGDC---TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKL-VNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        80 l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~-i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      ++++..++   .|.+||+.+++.+..+..+ .....+++  +++|+.++ +...++. |.+|++.....+..        
T Consensus        98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~--spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~--------  166 (331)
T 3u4y_A           98 AVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAI--SPNGNGLILIDRSSANTVRRFKIDADGVLFD--------  166 (331)
T ss_dssp             EEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEE--CTTSSCEEEEEETTTTEEEEEEECTTCCEEE--------
T ss_pred             EEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEE--CCCCCEEEEEecCCCceEEEEEECCCCcEee--------
Confidence            98655553   8999999998887776543 34466666  55677555 4455577 99999864321111        


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCee---EeEEecCcceeeeEEEEE
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKE---VACYKKDSILFGATSVDF  230 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~  230 (320)
                                ..    ...+ ........++|+|+|++++ ++..++.|.+||+.+++.   +..+...   ..+..++|
T Consensus       167 ----------~~----~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~  228 (331)
T 3u4y_A          167 ----------TG----QEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVV  228 (331)
T ss_dssp             ----------EE----EEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEE
T ss_pred             ----------cC----Cccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEE
Confidence                      00    0111 2234578999999999664 555789999999988776   5444433   23467889


Q ss_pred             ecCCcEEEEEe-CCCeEEEEcCCCCeE--EEEeecC----CC---ceeEEEECcCCCeEEE-ecCCCceEeeecchHhh
Q psy14961        231 SVSGRLLFAGY-NDYTINVWDSLKCCR--VNHLMGH----EN---RVSCLQVSPDGTAFSS-GSWDTTLRDEESKNRYV  298 (320)
Q Consensus       231 s~~~~~l~~g~-~dg~v~~wd~~~~~~--~~~~~~h----~~---~i~~i~~s~~~~~l~s-~s~D~~ir~~~~~~~~~  298 (320)
                      +|+|++|+++. .++.|.+||..+++.  +..+..+    ..   ....++|+|||++|+. +..+++|++|+...+..
T Consensus       229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~  307 (331)
T 3u4y_A          229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV  307 (331)
T ss_dssp             CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred             CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence            99999776665 577899999887765  3333322    22   2356999999998755 45567999999866544

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=3.9e-21  Score=167.33  Aligned_cols=252  Identities=10%  Similarity=0.062  Sum_probs=184.6

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCccccccccccccc---------CeEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTS---------FISC   70 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---------~v~~   70 (320)
                      |.+||..+++....+... ..+.+++|+|+|++++ +...++.|.+||.....    ....+..+..         ...+
T Consensus        71 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  145 (353)
T 3vgz_A           71 VYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE----VKGRLVLDDRKRTEEVRPLQPRE  145 (353)
T ss_dssp             EEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEEEESCCCCCCSSCCCCEEEE
T ss_pred             EEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe----eEEEEecCCCccccccCCCCCce
Confidence            468999888877666654 4467899999999554 55667999999975321    1122222211         2577


Q ss_pred             EEecCCCCEEEEEe--CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961         71 CIFPNSDQQILTGS--GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        71 ~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~  148 (320)
                      +.|+++++.+++++  .++.|.+||+.+++.+..+..+...+..+.+.  ++|+.+++++.++.|.+||+.+++.+..+.
T Consensus       146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s--~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~  223 (353)
T 3vgz_A          146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD--SEGKRLYTTNADGELITIDTADNKILSRKK  223 (353)
T ss_dssp             EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE--TTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred             EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEEC--CCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence            89999999887776  47899999999998887776455556667765  468899999999999999998876554432


Q ss_pred             cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEecCcceeeeEE
Q psy14961        149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYKKDSILFGATS  227 (320)
Q Consensus       149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  227 (320)
                      ..                       ..++...+.+++|+|+|++++.++ .++.|.+||+.+++.+..+....    ...
T Consensus       224 ~~-----------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~  276 (353)
T 3vgz_A          224 LL-----------------------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----SLA  276 (353)
T ss_dssp             CC-----------------------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCC
T ss_pred             cC-----------------------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----Cce
Confidence            10                       012444678899999999776655 45999999999888766555432    245


Q ss_pred             EEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961        228 VDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       228 ~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                      ++|+|+|++++++. .++.|.+||..+++.+..+.. ...+.+++|+|||++|+.+..++.
T Consensus       277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~  336 (353)
T 3vgz_A          277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSLALSADGKTLYVSVKQKS  336 (353)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEEECCC
T ss_pred             EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEEcccc
Confidence            88999999766655 689999999988887776654 346899999999997777766543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.91  E-value=3e-21  Score=168.17  Aligned_cols=261  Identities=11%  Similarity=0.103  Sum_probs=170.6

Q ss_pred             EeecccceeEE-EEEeCccceEEEEEcCCCCEEEEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          3 IWDGLTQTKEH-SVTMPATWVMACAYAPSGSVVASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         3 ~W~~~~~~~~~-~~~~~~~~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .||..+++... ....+......++|+|+|+ |++++.   ++.|.+|++...  .......+..+...+..+.|+++++
T Consensus        22 ~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g--~~~~~~~~~~~~~~p~~~a~spdg~   98 (347)
T 3hfq_A           22 TLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ--TAHKLNTVVAPGTPPAYVAVDEARQ   98 (347)
T ss_dssp             EEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT--EEEEEEEEEEESCCCSEEEEETTTT
T ss_pred             EEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC--cEEEeeeeecCCCCCEEEEECCCCC
Confidence            34555555332 2223345567899999999 555544   689999998432  2222333344666778899999999


Q ss_pred             EEEEEe-CCCeEEEEECCC-cc--eeeecccC---------ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-CCcEE
Q psy14961         79 QILTGS-GDCTCALWDVES-SQ--LLQSFHGH---------TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-TGYCV  144 (320)
Q Consensus        79 ~l~s~~-~dg~v~iwd~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-~~~~~  144 (320)
                      .|++++ .++.|.+|++.. +.  .+..+...         ...+.++++  +++|+.+++...++.|.+||+. ++...
T Consensus        99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--spdg~l~v~~~~~~~v~~~~~~~~g~~~  176 (347)
T 3hfq_A           99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL--TPDNRLAVIDLGSDKVYVYNVSDAGQLS  176 (347)
T ss_dssp             EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE--CTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred             EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE--CCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence            888888 689999999853 22  22222211         113555666  5568866666778899999987 33321


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEE-eeCCCeEEEEECCC--CeeEe--EEec
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVAT-GSDDATCRLFDLRA--DKEVA--CYKK  218 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s-~s~dg~i~iwd~~~--~~~~~--~~~~  218 (320)
                      ..                         ..+.. ....+..++|+|+|+++++ ...++.+.+|+++.  ++...  ....
T Consensus       177 ~~-------------------------~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~  231 (347)
T 3hfq_A          177 EQ-------------------------SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT  231 (347)
T ss_dssp             EE-------------------------EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred             Ee-------------------------eeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee
Confidence            10                         00111 1224678999999996655 56788999999874  43221  1111


Q ss_pred             Ccc----eeeeEEEEEecCCcEEE-EEeCCCeEEEEcCC---CCeEEEEeecCCCceeEEEECcCCCeEEEecC-CCceE
Q psy14961        219 DSI----LFGATSVDFSVSGRLLF-AGYNDYTINVWDSL---KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-DTTLR  289 (320)
Q Consensus       219 ~~~----~~~~~~~~~s~~~~~l~-~g~~dg~v~~wd~~---~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-D~~ir  289 (320)
                      ...    ...+..++|+|+|++|+ ++..++.|.+||+.   ....+..+..|...+.+++|+|||++|++++. ++.++
T Consensus       232 ~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~  311 (347)
T 3hfq_A          232 IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT  311 (347)
T ss_dssp             SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred             cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence            111    02356799999999875 45568999999976   33455666677777899999999998888775 48999


Q ss_pred             eeec
Q psy14961        290 DEES  293 (320)
Q Consensus       290 ~~~~  293 (320)
                      +|+.
T Consensus       312 v~~~  315 (347)
T 3hfq_A          312 LYAR  315 (347)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9965

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.91  E-value=4.2e-22  Score=190.73  Aligned_cols=266  Identities=14%  Similarity=0.074  Sum_probs=189.2

Q ss_pred             ccceEEEEEcCCCCEEEEecC-CC-----eEEEEEecccCCcccccccccccc------------------------cCe
Q psy14961         19 ATWVMACAYAPSGSVVASGGL-DN-----KVTVYAIALEDDSSAKKKTVATHT------------------------SFI   68 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~-dg-----~i~v~~~~~~~~~~~~~~~~~~h~------------------------~~v   68 (320)
                      ...|.+++|+|||++|++++. |+     .|++||+.....    ...+..+.                        ..+
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  111 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT----RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI  111 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE----EEEECGGGTC--------------------CCEES
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCce----eEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence            456889999999999999988 88     899999853221    11111221                        236


Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~  146 (320)
                      .++.|++++++|++++. +.|++||+.++.  ....+..+...+..++|  +|+|+.|+.++. +.|++||+.++.....
T Consensus       112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~--SPDG~~la~~~~-~~i~~~d~~~g~~~~~  187 (741)
T 2ecf_A          112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKL--SPKGGFVSFIRG-RNLWVIDLASGRQMQL  187 (741)
T ss_dssp             CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEE--CTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred             ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccC--CCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence            78899999999999886 999999998872  34456667777877777  557999998874 6899999988765432


Q ss_pred             eccCC----------------------------ccc---cCCC---------------------------------eEEE
Q psy14961        147 FEGHH----------------------------NLI---TDDK---------------------------------LVNI  162 (320)
Q Consensus       147 ~~~~~----------------------------~~~---~~d~---------------------------------~i~i  162 (320)
                      ...+.                            ..+   ..++                                 .|.+
T Consensus       188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~  267 (741)
T 2ecf_A          188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV  267 (741)
T ss_dssp             CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred             ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence            22111                            000   1121                                 6778


Q ss_pred             EECcC-Ceeeeeec--CCCCCeEEEEEcCCCCEEEEeeC-----CCeEEEEECCCCeeEeEEecCccee--eeEEEEEec
Q psy14961        163 WDMRT-GYCVQSFE--GHQSDVNSVKFHPSGDAVATGSD-----DATCRLFDLRADKEVACYKKDSILF--GATSVDFSV  232 (320)
Q Consensus       163 wd~~~-~~~~~~~~--~~~~~v~~v~~~p~g~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~s~  232 (320)
                      ||+.+ ++......  .|...+.+++| |+|++|+.++.     +..|.+||+.+++............  ....++|+|
T Consensus       268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp  346 (741)
T 2ecf_A          268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD  346 (741)
T ss_dssp             ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred             EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence            89887 76544332  47778999999 99999986653     5689999999887655443322110  224678999


Q ss_pred             CCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCCCceeEE-EECcCCCeEE-EecCCC--ceEeeecc
Q psy14961        233 SGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHENRVSCL-QVSPDGTAFS-SGSWDT--TLRDEESK  294 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~~~i~~i-~~s~~~~~l~-s~s~D~--~ir~~~~~  294 (320)
                      ||+++++++.+|.++||... .+. ...+..|...|..+ +|+|||+.|+ +++.|+  ++++|+..
T Consensus       347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~  412 (741)
T 2ecf_A          347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP  412 (741)
T ss_dssp             TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred             CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence            99999999999987887543 233 66777888888887 5999998764 555555  89999853

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.90  E-value=1.5e-22  Score=193.15  Aligned_cols=287  Identities=11%  Similarity=0.033  Sum_probs=189.1

Q ss_pred             CeEeecccceeEEEEEeCcc---ceEEEEEcCCCCEEEEecCC---------CeEEEEEecccCCcccccccccccccCe
Q psy14961          1 MIIWDGLTQTKEHSVTMPAT---WVMACAYAPSGSVVASGGLD---------NKVTVYAIALEDDSSAKKKTVATHTSFI   68 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~---~V~~~~~~~~~~~l~s~~~d---------g~i~v~~~~~~~~~~~~~~~~~~h~~~v   68 (320)
                      |++||..+++....+..+..   .|.+++|||||++|++++.+         +.+.+||+.....  ........|...+
T Consensus        39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~  116 (723)
T 1xfd_A           39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKL  116 (723)
T ss_dssp             EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCC
T ss_pred             EEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccc
Confidence            46899998877654444433   48999999999999998764         7788999864321  1222233455557


Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccce------------------eEEEEeeCCCCCEEEEEeCC
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGEL------------------MDLDLAPSETGNTFVSGSSD  130 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~~l~s~~~d  130 (320)
                      ..+.|+|+++.|+.++. +.|++||+.+++.......+...+                  ..+.|  +|+|+.|++++.|
T Consensus       117 ~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~--SpDg~~la~~~~~  193 (723)
T 1xfd_A          117 QYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW--SPDGTRLAYAAIN  193 (723)
T ss_dssp             SBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE--CTTSSEEEEEEEE
T ss_pred             cccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEE--CCCCCEEEEEEEC
Confidence            88999999999999885 799999999887665544433333                  45555  6679999888755


Q ss_pred             -CeEEEEeCCCCc-----EEEE--eccCCccccCCCeEEEEECcCCeeeeeecCC------CCCeEEEEEcCCCCEEEEe
Q psy14961        131 -KLVNIWDMRTGY-----CVQS--FEGHHNLITDDKLVNIWDMRTGYCVQSFEGH------QSDVNSVKFHPSGDAVATG  196 (320)
Q Consensus       131 -g~i~lwd~~~~~-----~~~~--~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~p~g~~l~s~  196 (320)
                       +.+++|++....     .+..  +... .....+..+++||+.++++...+..+      ...+.+++|+|||+.+++.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~  272 (723)
T 1xfd_A          194 DSRVPIMELPTYTGSIYPTVKPYHYPKA-GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW  272 (723)
T ss_dssp             CTTSCEEEECCCSSSSSCCCEEEECCBT-TSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred             CCccceEEeeccCCcCCCcceeccCCCC-CCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence             457777753211     0011  1100 00122347999999988765555544      5678999999999988766


Q ss_pred             eC----CCeEEEEECCCCeeEeEEecC-cceee--eEEEEEecCCcEEEE--EeCCC------eEEEEc-CCCCe--EEE
Q psy14961        197 SD----DATCRLFDLRADKEVACYKKD-SILFG--ATSVDFSVSGRLLFA--GYNDY------TINVWD-SLKCC--RVN  258 (320)
Q Consensus       197 s~----dg~i~iwd~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~l~~--g~~dg------~v~~wd-~~~~~--~~~  258 (320)
                      +.    +..|.+||+.+++........ .....  ...++|+|||+.|+.  +..++      .|.+|| ...+.  ...
T Consensus       273 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~  352 (723)
T 1xfd_A          273 LNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ  352 (723)
T ss_dssp             EETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC
T ss_pred             EcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee
Confidence            43    357999999888755443221 11111  136789999997765  44566      566777 33333  134


Q ss_pred             EeecCCCceeE-EEECcCCCeEEEecCC---CceEeeec
Q psy14961        259 HLMGHENRVSC-LQVSPDGTAFSSGSWD---TTLRDEES  293 (320)
Q Consensus       259 ~~~~h~~~i~~-i~~s~~~~~l~s~s~D---~~ir~~~~  293 (320)
                      .+..+...+.. ++|+|||+.|+..+.+   +++++|+.
T Consensus       353 ~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  391 (723)
T 1xfd_A          353 SITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA  391 (723)
T ss_dssp             BSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred             EeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence            44444444544 7999999998766554   78999985

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.90  E-value=9.3e-22  Score=188.30  Aligned_cols=283  Identities=8%  Similarity=0.030  Sum_probs=192.1

Q ss_pred             CeEeecccceeEEEEEeCc------------------------cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc
Q psy14961          1 MIIWDGLTQTKEHSVTMPA------------------------TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA   56 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~------------------------~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~   56 (320)
                      |.+||..+++....+..+.                        ..|.+++|+|||++|++++. +.|.+||+.....  .
T Consensus        66 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~--~  142 (741)
T 2ecf_A           66 LWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK--A  142 (741)
T ss_dssp             EEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCST--T
T ss_pred             EEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCc--c
Confidence            4689988877554333222                        23788999999999999886 9999999853210  0


Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc----------------eeEEEEeeCCC
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE----------------LMDLDLAPSET  120 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~  120 (320)
                      ....+..|...+.++.|+++++.|++++ ++.|++||+.+++.......+...                +..+.|  +||
T Consensus       143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~--SpD  219 (741)
T 2ecf_A          143 AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWW--APD  219 (741)
T ss_dssp             SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEE--CTT
T ss_pred             eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEE--CCC
Confidence            2234566778899999999999999887 569999999887765544333322                244555  567


Q ss_pred             CCEEEEEeCCC---------------------------------eEEEEeCCC-CcEEEEecc-------------CCc-
Q psy14961        121 GNTFVSGSSDK---------------------------------LVNIWDMRT-GYCVQSFEG-------------HHN-  152 (320)
Q Consensus       121 ~~~l~s~~~dg---------------------------------~i~lwd~~~-~~~~~~~~~-------------~~~-  152 (320)
                      |+.|++++.|+                                 .|.+||+.+ ++......+             ... 
T Consensus       220 g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~  299 (741)
T 2ecf_A          220 DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQH  299 (741)
T ss_dssp             SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTE
T ss_pred             CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCE
Confidence            89999887765                                 788999988 654332211             111 


Q ss_pred             cc-------cCCCeEEEEECcCCeeeeeecCCCC----CeEEEEEcCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCc
Q psy14961        153 LI-------TDDKLVNIWDMRTGYCVQSFEGHQS----DVNSVKFHPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDS  220 (320)
Q Consensus       153 ~~-------~~d~~i~iwd~~~~~~~~~~~~~~~----~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~  220 (320)
                      ++       ..+..|.+||+.++++...+..+..    .+.+++|+|+|+++++++.||.++||.++. ++ ...+..+.
T Consensus       300 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~  378 (741)
T 2ecf_A          300 LSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGN  378 (741)
T ss_dssp             EEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSS
T ss_pred             EEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecc
Confidence            11       1246789999999887766655443    456899999999889999999888887652 33 33332221


Q ss_pred             ceeeeEEE-EEecCCcEEEE-EeCCC--eEEEEcCCC-CeEEEEeecCCCceeEEEECcCCCeEEEecCC----CceEee
Q psy14961        221 ILFGATSV-DFSVSGRLLFA-GYNDY--TINVWDSLK-CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD----TTLRDE  291 (320)
Q Consensus       221 ~~~~~~~~-~~s~~~~~l~~-g~~dg--~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~  291 (320)
                        ..+..+ .|+|+|+.|+. ++.++  .+++|+... +.....+.. ...+..++|||||++|+....+    ..+.++
T Consensus       379 --~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~  455 (741)
T 2ecf_A          379 --WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELF  455 (741)
T ss_dssp             --SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             --eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEE
Confidence              223455 59999987755 44455  899998643 333344444 6678899999999988766443    345566


Q ss_pred             ec
Q psy14961        292 ES  293 (320)
Q Consensus       292 ~~  293 (320)
                      +.
T Consensus       456 ~~  457 (741)
T 2ecf_A          456 RA  457 (741)
T ss_dssp             ET
T ss_pred             Ec
Confidence            53

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.90  E-value=4.4e-21  Score=190.32  Aligned_cols=278  Identities=14%  Similarity=0.135  Sum_probs=202.5

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT   82 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s   82 (320)
                      ||....+.....+..|...+.++.|+++ .++++++.++.+.+|.++....   ....+..|. .+.+..|+++++.++.
T Consensus       187 lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~---~~~~l~~~~-~~~~~~~SpDG~~la~  261 (1045)
T 1k32_A          187 IWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGK---DLRKHTSFT-DYYPRHLNTDGRRILF  261 (1045)
T ss_dssp             EEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSC---SCEECCCCC-SSCEEEEEESSSCEEE
T ss_pred             EEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCC---cceEecCCC-CcceeeEcCCCCEEEE
Confidence            4543322333445667888999999998 6777888899999998764322   122344444 3566788999998888


Q ss_pred             EeCCCeEEEEECCCcceeeeccc-----------CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         83 GSGDCTCALWDVESSQLLQSFHG-----------HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      +. ++.|.+|++..... ..+..           |...+..++|+| |+|+.|++++ ++.+.+|++..+.... +..+.
T Consensus       262 ~~-~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~-pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~  336 (1045)
T 1k32_A          262 SK-GGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSP-LDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPL  336 (1045)
T ss_dssp             EE-TTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEE-CGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCS
T ss_pred             Ee-CCEEEEecCCceEe-eeeccCcccccccccccccccceeeecC-CCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCC
Confidence            74 89999999855443 34443           234577777751 4688888887 7899999998776432 22222


Q ss_pred             c---------------cccCCCeEE-EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        152 N---------------LITDDKLVN-IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       152 ~---------------~~~~d~~i~-iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      .               ....+..+. +||+..+.... +.+|...+.+++|+|+|++|++++.++.+++||+.+++....
T Consensus       337 ~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~  415 (1045)
T 1k32_A          337 RIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI  415 (1045)
T ss_dssp             CEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             cceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe
Confidence            1               012244566 78887765543 347888999999999999999999999999999998876655


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCCC----------eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYNDY----------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg----------~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      ...+..  .+..++|||||++|++++.++          .|.+||+.++. ...+..|...+..++|+|||++|+.++.+
T Consensus       416 ~~~~~~--~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~  492 (1045)
T 1k32_A          416 ERSREA--MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR  492 (1045)
T ss_dssp             EECSSS--CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred             ccCCCC--CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence            433221  245788999999998887644          89999998776 66678888899999999999999999998


Q ss_pred             CceEeeecc
Q psy14961        286 TTLRDEESK  294 (320)
Q Consensus       286 ~~ir~~~~~  294 (320)
                      +..+.|+..
T Consensus       493 ~~~~~~~~~  501 (1045)
T 1k32_A          493 SLDPSPDRV  501 (1045)
T ss_dssp             CCCCEECSS
T ss_pred             cCCcCcchh
Confidence            888888743

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.90  E-value=2.1e-20  Score=161.45  Aligned_cols=249  Identities=12%  Similarity=0.122  Sum_probs=182.2

Q ss_pred             CeEeecccceeEEEEEeCcc--ceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCccccccccc-c----cccCeEEEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPAT--WVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVA-T----HTSFISCCI   72 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~--~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~----h~~~v~~~~   72 (320)
                      |.+||..+++....+..+..  .+..++|+|+|+++ ++++.++.|.+||+....    ....+. .    |...+..+.
T Consensus        13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~   88 (337)
T 1pby_B           13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE----TLGRIDLSTPEERVKSLFGAA   88 (337)
T ss_dssp             EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC----EEEEEECCBTTEEEECTTCEE
T ss_pred             EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC----eEeeEEcCCcccccccccceE
Confidence            46899998888776665432  47889999999865 556668899999975321    111121 1    122566788


Q ss_pred             ecCCCCEEEEEe------------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961         73 FPNSDQQILTGS------------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT  140 (320)
Q Consensus        73 ~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~  140 (320)
                      |+++++.+++++            .++.|.+||+.+++.+..+.. ...+..+++  +++|+.|+++  ++.|.+||+.+
T Consensus        89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~--s~dg~~l~~~--~~~i~~~d~~~  163 (337)
T 1pby_B           89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAW--ARDGSKLYGL--GRDLHVMDPEA  163 (337)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEE--CTTSSCEEEE--SSSEEEEETTT
T ss_pred             ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEE--CCCCCEEEEe--CCeEEEEECCC
Confidence            999999988886            579999999998887766654 345566666  5568878777  68899999999


Q ss_pred             CcEEEEeccCC--c--cccC-----------CC-----------------------eEEEEECcCCeee-eeecCCCCCe
Q psy14961        141 GYCVQSFEGHH--N--LITD-----------DK-----------------------LVNIWDMRTGYCV-QSFEGHQSDV  181 (320)
Q Consensus       141 ~~~~~~~~~~~--~--~~~~-----------d~-----------------------~i~iwd~~~~~~~-~~~~~~~~~v  181 (320)
                      ++....+....  .  ....           ++                       .+.+||+.+++.. ..+..+...+
T Consensus       164 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~  243 (337)
T 1pby_B          164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY  243 (337)
T ss_dssp             TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred             CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCce
Confidence            98776664332  1  1111           11                       4689999887654 2344566678


Q ss_pred             EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      .+++|+|+|++++++  ++.|.+||+.+++.+..+....   .+..++|+|+|++|++++.++.|.+||..+++.+..+.
T Consensus       244 ~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~  318 (337)
T 1pby_B          244 FSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             EEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             eeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCC---ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence            899999999998888  7999999999887766554332   34678999999999999889999999998888777765


Q ss_pred             cC
Q psy14961        262 GH  263 (320)
Q Consensus       262 ~h  263 (320)
                      .+
T Consensus       319 ~~  320 (337)
T 1pby_B          319 LP  320 (337)
T ss_dssp             CG
T ss_pred             cC
Confidence            44

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.89  E-value=1.6e-20  Score=162.25  Aligned_cols=251  Identities=14%  Similarity=0.091  Sum_probs=177.7

Q ss_pred             CEEEEecCCCeEEEEEecccCCccccccccc-cccc-CeEEEEecCCCCEEE-EEeCCCeEEEEECCCcceeeecccC--
Q psy14961         32 SVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTS-FISCCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGH--  106 (320)
Q Consensus        32 ~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~--  106 (320)
                      .+|++++.++.|.+||+...    .....+. .+.. .+..+.|+++++.++ ++..++.|.+||+.+++.+..+...  
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~   77 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKM----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTT----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred             cEEEEcCCCCeEEEEECCCC----cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence            47899999999999997532    1222222 2211 367788999997765 4556789999999998877655431  


Q ss_pred             ---ccceeEEEEeeCCCCCEEEEEe------------CCCeEEEEeCCCCcEEEEeccCCc------------cccCCCe
Q psy14961        107 ---TGELMDLDLAPSETGNTFVSGS------------SDKLVNIWDMRTGYCVQSFEGHHN------------LITDDKL  159 (320)
Q Consensus       107 ---~~~v~~~~~~~~~~~~~l~s~~------------~dg~i~lwd~~~~~~~~~~~~~~~------------~~~~d~~  159 (320)
                         ...+..+++  +++|+.+++++            .++.|.+||+.+++.+..+.....            +...++.
T Consensus        78 ~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~  155 (337)
T 1pby_B           78 EERVKSLFGAAL--SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD  155 (337)
T ss_dssp             TEEEECTTCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS
T ss_pred             ccccccccceEE--CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCe
Confidence               124555666  55788888886            579999999998877665532111            1122567


Q ss_pred             EEEEECcCCeeeeeecCCC--CCeEEEEEcCCCCEEEEeeC-CC-----------------------eEEEEECCCCeeE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQ--SDVNSVKFHPSGDAVATGSD-DA-----------------------TCRLFDLRADKEV  213 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~--~~v~~v~~~p~g~~l~s~s~-dg-----------------------~i~iwd~~~~~~~  213 (320)
                      +.+||+.+++....+..+.  .+   +.|+|+|..++..+. ++                       .|.+||+.+++..
T Consensus       156 i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~  232 (337)
T 1pby_B          156 LHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA  232 (337)
T ss_dssp             EEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred             EEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence            9999999998877665443  33   378999987655443 33                       4689999887654


Q ss_pred             eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        214 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                       ..........+..++|+|+|++++++  ++.|.+||..+++.+..+.. ...+.+++|+|||++|++++.|+.|++|+.
T Consensus       233 -~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~  308 (337)
T 1pby_B          233 -MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDA  308 (337)
T ss_dssp             -EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred             -EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence             22211111234578999999999988  68999999988877766553 346789999999999999999999999997


Q ss_pred             ch
Q psy14961        294 KN  295 (320)
Q Consensus       294 ~~  295 (320)
                      +.
T Consensus       309 ~~  310 (337)
T 1pby_B          309 ET  310 (337)
T ss_dssp             TT
T ss_pred             cC
Confidence            53

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.89  E-value=3.4e-21  Score=183.48  Aligned_cols=281  Identities=10%  Similarity=0.018  Sum_probs=180.2

Q ss_pred             EeecccceeE-EEEEeCc-----------------cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccc
Q psy14961          3 IWDGLTQTKE-HSVTMPA-----------------TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH   64 (320)
Q Consensus         3 ~W~~~~~~~~-~~~~~~~-----------------~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h   64 (320)
                      +||..+++.. ..+..+.                 ..|.+++|+|| ..++.+ .++.+++||+...     ....+..+
T Consensus        47 ~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~-----~~~~l~~~  119 (706)
T 2z3z_A           47 VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR-----KVTYLFDT  119 (706)
T ss_dssp             EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT-----EEEEEECC
T ss_pred             EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCCC-----ceEEccCC
Confidence            7998887762 2233232                 35899999999 555555 3599999998532     12233445


Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-----cceeeecccCccc--------------eeEEEEeeCCCCCEEE
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALWDVES-----SQLLQSFHGHTGE--------------LMDLDLAPSETGNTFV  125 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~~l~  125 (320)
                      ...+.++.|+++++.|+++ .|+.|++||+.+     ++.......+...              +..+.|  +|+|+.|+
T Consensus       120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~--SpDg~~la  196 (706)
T 2z3z_A          120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW--SPKGSCLA  196 (706)
T ss_dssp             TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE--CTTSSEEE
T ss_pred             cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE--CCCCCEEE
Confidence            5667888999999998885 689999999988     7665544333332              355666  56799999


Q ss_pred             EEeCCC----eEEEEeCCCCcE-EEEeccC-CccccCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCEEEEee
Q psy14961        126 SGSSDK----LVNIWDMRTGYC-VQSFEGH-HNLITDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGS  197 (320)
Q Consensus       126 s~~~dg----~i~lwd~~~~~~-~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s  197 (320)
                      +++.|.    .+.+.+...... .....-. ......+..|.+||+.+++.....  ..|...+.+++|+|+|+.|++++
T Consensus       197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~  276 (706)
T 2z3z_A          197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE  276 (706)
T ss_dssp             EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred             EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence            887332    122222221111 1111000 000123467899999888755443  24667899999999999999887


Q ss_pred             CCC-----eEEEEECCCC-eeEeEEecCcc--eeeeEEEEEec--CCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCCCc
Q psy14961        198 DDA-----TCRLFDLRAD-KEVACYKKDSI--LFGATSVDFSV--SGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHENR  266 (320)
Q Consensus       198 ~dg-----~i~iwd~~~~-~~~~~~~~~~~--~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~~~  266 (320)
                      .|+     .|.+||+.++ ...........  ......+.|+|  +|++++++..++.+++|+.. .+..+..+..|...
T Consensus       277 ~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~  356 (706)
T 2z3z_A          277 VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE  356 (706)
T ss_dssp             ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred             eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence            765     8999999988 33222221111  00124578999  99999999999999999764 45566777788888


Q ss_pred             eeE-EEECcCCCeEEEecC-CC----ceEeeec
Q psy14961        267 VSC-LQVSPDGTAFSSGSW-DT----TLRDEES  293 (320)
Q Consensus       267 i~~-i~~s~~~~~l~s~s~-D~----~ir~~~~  293 (320)
                      +.. ++|+|||+.|+.++. ++    .|..|+.
T Consensus       357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~  389 (706)
T 2z3z_A          357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDI  389 (706)
T ss_dssp             EEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred             EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence            877 899999987765544 43    4555554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.89  E-value=2e-19  Score=157.47  Aligned_cols=267  Identities=11%  Similarity=0.061  Sum_probs=166.9

Q ss_pred             eEee--cccceeEEEEEeCccceEEEEEcCCCCEEEEecCC----CeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          2 IIWD--GLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD----NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         2 ~~W~--~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d----g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      ++|.  ..+++.......+......++|+|+|++|++++.+    +.+.+|+++..............+......+.+  
T Consensus        30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--  107 (361)
T 3scy_A           30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--  107 (361)
T ss_dssp             EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--
T ss_pred             EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--
Confidence            4554  34444332222245566778999999999998876    799999986432222222223333444555666  


Q ss_pred             CCCEEEEEe-CCCeEEEEECCCcceeeecc---cC-----------ccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCC
Q psy14961         76 SDQQILTGS-GDCTCALWDVESSQLLQSFH---GH-----------TGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMR  139 (320)
Q Consensus        76 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~---~~-----------~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~  139 (320)
                      +++.+++++ .++.|.+|++.....+..+.   .+           ...+.++++  +|+|+++++++ .++.|.+|++.
T Consensus       108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~v~v~~~~  185 (361)
T 3scy_A          108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI--TPDGKYLLADDLGTDQIHKFNIN  185 (361)
T ss_dssp             CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE--CTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE--CCCCCEEEEEeCCCCEEEEEEEc
Confidence            677777776 57899999987543322111   01           122345655  56788666554 47889999876


Q ss_pred             CCcE------EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCee
Q psy14961        140 TGYC------VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKE  212 (320)
Q Consensus       140 ~~~~------~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~  212 (320)
                      ....      +...                    +........+...+..++|+|+|+++++++ .++.|.+||+.+++.
T Consensus       186 ~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~  245 (361)
T 3scy_A          186 PNANADNKEKFLTK--------------------GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML  245 (361)
T ss_dssp             TTCCTTTCCCCEEE--------------------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred             CCCCcccccceeec--------------------ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence            4321      1000                    000000112334567899999999887766 689999999986643


Q ss_pred             EeE--EecCc-ceeeeEEEEEecCCcEEEEEeC--CCeEEEEcCC--CCe--EEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961        213 VAC--YKKDS-ILFGATSVDFSVSGRLLFAGYN--DYTINVWDSL--KCC--RVNHLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       213 ~~~--~~~~~-~~~~~~~~~~s~~~~~l~~g~~--dg~v~~wd~~--~~~--~~~~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ...  ..... .......++|+|||++|+++..  ++.|.+|++.  ++.  .+..+.. ...+.+++|+|||++|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~  324 (361)
T 3scy_A          246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC  324 (361)
T ss_dssp             EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred             EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence            221  11111 1123468999999999877665  4899999874  233  3444444 55788999999999888777


Q ss_pred             -CCCceEeeec
Q psy14961        284 -WDTTLRDEES  293 (320)
Q Consensus       284 -~D~~ir~~~~  293 (320)
                       .++.|++|+.
T Consensus       325 ~~~~~v~v~~~  335 (361)
T 3scy_A          325 RDTNVIQIFER  335 (361)
T ss_dssp             TTTTEEEEEEE
T ss_pred             CCCCCEEEEEE
Confidence             6789999764

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.89  E-value=3e-21  Score=173.49  Aligned_cols=207  Identities=13%  Similarity=0.069  Sum_probs=151.0

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCc-------ccc----cccccccccCeEEEEecCCCCEEE----E
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS-------SAK----KKTVATHTSFISCCIFPNSDQQIL----T   82 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-------~~~----~~~~~~h~~~v~~~~~~~~~~~l~----s   82 (320)
                      +...++.+++++++.++++++.++ +++|+.......       ...    ......+...|.++.|++++++|+    +
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s  113 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS  113 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence            344578899999999999999888 889875311000       000    001123456799999999999999    7


Q ss_pred             EeCCCeEEEEECCCc--------ce---eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         83 GSGDCTCALWDVESS--------QL---LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        83 ~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      |+.|+.|++||+.++        +.   +..+.+|...|.+++|+|. +++.|++++.||.|++||++++..+       
T Consensus       114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~-~~~~las~s~Dg~v~iwD~~~~~~~-------  185 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT-VPSMVAVCLADGSIAVLQVTETVKV-------  185 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS-CTTEEEEEETTSCEEEEEESSSEEE-------
T ss_pred             cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC-CCCEEEEEECCCeEEEEEcCCCcce-------
Confidence            888999999998664        21   3556678999999998764 2679999999999999998876332       


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-----eeeeE
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-----LFGAT  226 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~  226 (320)
                                          ....+|...|.+++|+|+|++|++|+.||+|++||++ ++....+..+..     ...+.
T Consensus       186 --------------------~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~  244 (434)
T 2oit_A          186 --------------------CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL  244 (434)
T ss_dssp             --------------------EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred             --------------------eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence                                1223477789999999999999999999999999998 444433332211     12567


Q ss_pred             EEEEecCCcEEEEEe-CCC------eEEEEcCCCC
Q psy14961        227 SVDFSVSGRLLFAGY-NDY------TINVWDSLKC  254 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~-~dg------~v~~wd~~~~  254 (320)
                      ++.|++++.++++.+ .+|      .+++|++.+.
T Consensus       245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            899999988875533 443      3889997653

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.89  E-value=8.1e-21  Score=188.42  Aligned_cols=283  Identities=11%  Similarity=0.077  Sum_probs=199.4

Q ss_pred             CeEeecccceeEEEEEeCccce-------EEEEEcCCCCEEEEecCC----C--eEEEEEecccCCcc------------
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWV-------MACAYAPSGSVVASGGLD----N--KVTVYAIALEDDSS------------   55 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V-------~~~~~~~~~~~l~s~~~d----g--~i~v~~~~~~~~~~------------   55 (320)
                      |++||..+++ ...+..|...+       .+++|+|||+++++++.+    +  .|.+|++.......            
T Consensus        82 i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~s  160 (1045)
T 1k32_A           82 LYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFA  160 (1045)
T ss_dssp             EEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEE
T ss_pred             EEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeC
Confidence            4689988766 34566677777       899999999988887755    3  46666653211000            


Q ss_pred             ---------------------------------cccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceee
Q psy14961         56 ---------------------------------AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQ  101 (320)
Q Consensus        56 ---------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~  101 (320)
                                                       .....+..|...+.+..|+++ ..+++++.|+.+++|.+.. +....
T Consensus       161 pG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~  239 (1045)
T 1k32_A          161 DGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLR  239 (1045)
T ss_dssp             TTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCE
T ss_pred             CCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcce
Confidence                                             001122356677778888766 5667778889999997653 33334


Q ss_pred             ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC--------------------------Ccccc
Q psy14961        102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH--------------------------HNLIT  155 (320)
Q Consensus       102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~--------------------------~~~~~  155 (320)
                      .+..|. .+...+++|  +|+.|+.+ .++.|.+||+..... ..+..+                          .....
T Consensus       240 ~l~~~~-~~~~~~~Sp--DG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~  314 (1045)
T 1k32_A          240 KHTSFT-DYYPRHLNT--DGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV  314 (1045)
T ss_dssp             ECCCCC-SSCEEEEEE--SSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE
T ss_pred             EecCCC-CcceeeEcC--CCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEE
Confidence            444444 345556654  68888877 489999999844332 233221                          11112


Q ss_pred             CCCeEEEEECcCCeeeeeecCCCC-CeEEEEEcCCCCEEEEeeCCCeEE-EEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQS-DVNSVKFHPSGDAVATGSDDATCR-LFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~~-~v~~v~~~p~g~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      .++.+.+|+...+... .+..|.. .+..++|+ +|+.++.++.++.+. +||+..++..... .+  ...+..++|+||
T Consensus       315 ~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~--~~~~~~~~~SpD  389 (1045)
T 1k32_A          315 SRGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-EN--LGNVFAMGVDRN  389 (1045)
T ss_dssp             ETTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CC--CCSEEEEEECTT
T ss_pred             EcCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CC--ccceeeeEECCC
Confidence            3567888988776544 3556776 89999999 999999999888888 9999876543322 22  123578899999


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC----------ceEeeecch
Q psy14961        234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT----------TLRDEESKN  295 (320)
Q Consensus       234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~----------~ir~~~~~~  295 (320)
                      |++|++++.++.|.+||+.++.......+|...+.+++|||||++|++++.++          .|++|+...
T Consensus       390 G~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~  461 (1045)
T 1k32_A          390 GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG  461 (1045)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred             CCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence            99999999999999999988877766668999999999999999999988754          899999643

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.88  E-value=3.3e-21  Score=179.66  Aligned_cols=232  Identities=12%  Similarity=0.009  Sum_probs=165.3

Q ss_pred             ccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEEEeC---CCeEEEEE
Q psy14961         19 ATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILTGSG---DCTCALWD   93 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~---dg~v~iwd   93 (320)
                      ..+|++++|+|||+.|++++. ||.++||+++..     ....+..|. ..+....|+++ +.+++++.   +...++|.
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-----~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~   94 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-----ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK   94 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-----EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-----CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence            457999999999999999887 999999997421     122344444 57888999987 67777765   45566765


Q ss_pred             CCC---cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         94 VES---SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        94 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      ++.   +... .+.... .....+++|+.++..+++++.++ +.+||+.+++....                        
T Consensus        95 ~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l------------------------  147 (582)
T 3o4h_A           95 VNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLREL------------------------  147 (582)
T ss_dssp             EETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEE------------------------
T ss_pred             EeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEe------------------------
Confidence            432   2222 232222 23345677765544455555544 44888776543221                        


Q ss_pred             eeeecCCCCCeEEEEEcCCCCEEEEeeCC----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC--
Q psy14961        171 VQSFEGHQSDVNSVKFHPSGDAVATGSDD----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY--  244 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p~g~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--  244 (320)
                         .. +..  .+++|+|||+++++++.+    +.|++||+.+++.... ..+.  .....++|||||++|+++..++  
T Consensus       148 ---~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l-~~~~--~~~~~~~~SpDG~~l~~~~~~~~~  218 (582)
T 3o4h_A          148 ---AR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF-DSGE--GSFSSASISPGMKVTAGLETAREA  218 (582)
T ss_dssp             ---EE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE-CCSS--CEEEEEEECTTSCEEEEEECSSCE
T ss_pred             ---ec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe-ecCC--CccccceECCCCCEEEEccCCCee
Confidence               11 111  688999999999988877    7899999988765432 2222  1247889999999999888888  


Q ss_pred             eEEEEcCCCCeEEEEeecCCCceeEEE--------ECcCCCeEEEecCCCceEeeec
Q psy14961        245 TINVWDSLKCCRVNHLMGHENRVSCLQ--------VSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       245 ~v~~wd~~~~~~~~~~~~h~~~i~~i~--------~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .|.+||..++... .+.+|...+..++        |+|||+++++++.|+++++|+.
T Consensus       219 ~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          219 RLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             EEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             EEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            8999999887766 6778888887788        9999999999999999999997

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.88  E-value=1.1e-19  Score=158.18  Aligned_cols=240  Identities=10%  Similarity=0.034  Sum_probs=171.3

Q ss_pred             cceEEEEEcCCCCEEEEecC-------CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEE
Q psy14961         20 TWVMACAYAPSGSVVASGGL-------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCAL   91 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~-------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~i   91 (320)
                      ..+..++|+|++++|+.++.       ++.|.+||....    .....+. .......+.++++++.++++ ..++.|.+
T Consensus        41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~  115 (353)
T 3vgz_A           41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL----EVTQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTA  115 (353)
T ss_dssp             SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC----CEEEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred             cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC----eEEEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence            45678999999998888774       567999986422    1122222 22345678888999866555 45799999


Q ss_pred             EECCCcceeeecccCccc---------eeEEEEeeCCCCCEEEEEe--CCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         92 WDVESSQLLQSFHGHTGE---------LMDLDLAPSETGNTFVSGS--SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~l~s~~--~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      ||+.+++.+..+..+...         ...+.++  ++|+.+++++  .++.|.+||+.+++.+..+             
T Consensus       116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-------------  180 (353)
T 3vgz_A          116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD--DATNTVYISGIGKESVIWVVDGGNIKLKTAI-------------  180 (353)
T ss_dssp             EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE--TTTTEEEEEEESSSCEEEEEETTTTEEEEEE-------------
T ss_pred             EeCCCCeeEEEEecCCCccccccCCCCCceEEEC--CCCCEEEEEecCCCceEEEEcCCCCceEEEe-------------
Confidence            999999887776654322         4556664  4677777665  4677888887766544332             


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc--ceeeeEEEEEecCCcEEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS--ILFGATSVDFSVSGRLLF  238 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~  238 (320)
                                    ..+...+.+++|+|+|+++++++.++.+.+||+.+++....+....  .......++|+|++++++
T Consensus       181 --------------~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~  246 (353)
T 3vgz_A          181 --------------QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF  246 (353)
T ss_dssp             --------------CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred             --------------cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence                          2233346678999999999999999999999999988766554311  122346789999999877


Q ss_pred             EEeC-CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCe-EEEecCCCceEeeecch
Q psy14961        239 AGYN-DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA-FSSGSWDTTLRDEESKN  295 (320)
Q Consensus       239 ~g~~-dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~-l~s~s~D~~ir~~~~~~  295 (320)
                      +++. ++.|.+||..+++.+..+..+.  ..+++|+|||+. +++...+++|.+|+...
T Consensus       247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~  303 (353)
T 3vgz_A          247 ITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS  303 (353)
T ss_dssp             EEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             EEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence            7664 5999999998887776665433  257999999995 55555799999999743

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.87  E-value=1.4e-19  Score=156.26  Aligned_cols=234  Identities=11%  Similarity=0.117  Sum_probs=159.4

Q ss_pred             EEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CCeEEEEECCCcce-eee
Q psy14961         26 AYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DCTCALWDVESSQL-LQS  102 (320)
Q Consensus        26 ~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~-~~~  102 (320)
                      .|.+++. .+++++.++.|.+||+...    .....+..+.... ++.|+++++.+++++. ++.|.+||+.+++. ...
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~   78 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTL----EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA   78 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTC----CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCccc----ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence            3666555 4677888999999997532    1222233344445 8999999997777665 89999999998887 666


Q ss_pred             cccCccceeEEEEeeCCCCCEEEEEeCCC---eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCC
Q psy14961        103 FHGHTGELMDLDLAPSETGNTFVSGSSDK---LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQS  179 (320)
Q Consensus       103 ~~~~~~~v~~~~~~~~~~~~~l~s~~~dg---~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~  179 (320)
                      +..+..+..++++  +++|++++++..++   .|.+||+.+++.+..+                           . +..
T Consensus        79 ~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~---------------------------~-~~~  128 (331)
T 3u4y_A           79 IQEGQSSMADVDI--TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI---------------------------P-IPY  128 (331)
T ss_dssp             EEECSSCCCCEEE--CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE---------------------------E-CCT
T ss_pred             cccCCCCccceEE--CCCCCEEEEecCCCCcccEEEEECCCCCeEEEE---------------------------E-CCC
Confidence            6666555544666  55788888555553   7888888776544332                           1 122


Q ss_pred             CeEEEEEcCCCCEEE-EeeCCCe-EEEEECCCCeeEeEEe--cCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCC
Q psy14961        180 DVNSVKFHPSGDAVA-TGSDDAT-CRLFDLRADKEVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKC  254 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~-s~s~dg~-i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~  254 (320)
                      ...+++|+|+|++++ +...++. +.+|++.....+....  .......+..++|+|+|+++++++ .++.|.+||..++
T Consensus       129 ~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  208 (331)
T 3u4y_A          129 DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP  208 (331)
T ss_dssp             TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred             CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence            457999999998654 4456678 9999987644332111  001112357889999999665554 6899999998877


Q ss_pred             eE---EEEeecCCCceeEEEECcCCCeEE-EecCCCceEeeecch
Q psy14961        255 CR---VNHLMGHENRVSCLQVSPDGTAFS-SGSWDTTLRDEESKN  295 (320)
Q Consensus       255 ~~---~~~~~~h~~~i~~i~~s~~~~~l~-s~s~D~~ir~~~~~~  295 (320)
                      +.   +..+.. ...+.+++|+|||++|+ +...++.|.+|+.+.
T Consensus       209 ~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~  252 (331)
T 3u4y_A          209 ENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS  252 (331)
T ss_dssp             TSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred             cccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence            66   655554 46678999999999665 445688899999654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.87  E-value=9.5e-20  Score=173.50  Aligned_cols=261  Identities=13%  Similarity=0.119  Sum_probs=175.5

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecc-----cCCccccccccccccc---------
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIAL-----EDDSSAKKKTVATHTS---------   66 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~-----~~~~~~~~~~~~~h~~---------   66 (320)
                      |++||..+++.. .+..+...+..++|+|||++|+++ .++.|++|++..     ...    ......+..         
T Consensus       103 i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~----~~~~~~~~~~~~~g~~~~  176 (706)
T 2z3z_A          103 LVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA----IAVTIDGTETLVYGQAVH  176 (706)
T ss_dssp             EEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC----EESCSCCBTTEEESSCCG
T ss_pred             EEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc----EEeccCCCCCeEcccchh
Confidence            468999877654 344455678889999999999995 689999999864     211    111111212         


Q ss_pred             -----CeEEEEecCCCCEEEEEe---------------------------------CCCeEEEEECCCcceeeecc--cC
Q psy14961         67 -----FISCCIFPNSDQQILTGS---------------------------------GDCTCALWDVESSQLLQSFH--GH  106 (320)
Q Consensus        67 -----~v~~~~~~~~~~~l~s~~---------------------------------~dg~v~iwd~~~~~~~~~~~--~~  106 (320)
                           .+.++.|++++++|++++                                 .+..|.+||+.+++......  .|
T Consensus       177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~  256 (706)
T 2z3z_A          177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK  256 (706)
T ss_dssp             GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred             hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence                 247889999999999887                                 45789999999887544332  34


Q ss_pred             ccceeEEEEeeCCCCCEEEEEeCCC-----eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCe
Q psy14961        107 TGELMDLDLAPSETGNTFVSGSSDK-----LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDV  181 (320)
Q Consensus       107 ~~~v~~~~~~~~~~~~~l~s~~~dg-----~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v  181 (320)
                      ...+..++|  +++|+.|++++.++     .|.+||+.+++....+...                      ........+
T Consensus       257 ~~~~~~~~~--spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~----------------------~~~~~~~~~  312 (706)
T 2z3z_A          257 EKFLTNLSW--SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE----------------------TDKHYVEPL  312 (706)
T ss_dssp             TCEEEEEEE--CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE----------------------ECSSCCCCC
T ss_pred             ceeEeeEEE--ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc----------------------cCCCeECcc
Confidence            556666766  55788899887765     7888888776322221100                      000011124


Q ss_pred             EEEEEcC--CCCEEEEeeCCCeEEEEECC-CCeeEeEEecCcceeeeEE-EEEecCCcEEEEEeC-CC----eEEEEcCC
Q psy14961        182 NSVKFHP--SGDAVATGSDDATCRLFDLR-ADKEVACYKKDSILFGATS-VDFSVSGRLLFAGYN-DY----TINVWDSL  252 (320)
Q Consensus       182 ~~v~~~p--~g~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~-~~~s~~~~~l~~g~~-dg----~v~~wd~~  252 (320)
                      .+++|+|  +|+++++++.|+.+++|+++ .++.+.......  ..+.. ++|+|+|+.|+.++. ++    .|..||..
T Consensus       313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  390 (706)
T 2z3z_A          313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE--WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK  390 (706)
T ss_dssp             SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS--SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred             CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC--eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence            5689999  99999999999999999875 444443333322  12333 789999998766654 43    56667766


Q ss_pred             CCeEEEEeecCCCceeEEEECcCCCeEEEecCC----CceEeeecch
Q psy14961        253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD----TTLRDEESKN  295 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~~~~~  295 (320)
                      ++. .. ...|...+.+++|||||++|+.+..+    +.+++|+...
T Consensus       391 ~~~-~~-~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~  435 (706)
T 2z3z_A          391 GGK-TK-DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK  435 (706)
T ss_dssp             CCC-CE-ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred             CCC-ce-eccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence            544 22 33477789999999999988876544    4599998543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.87  E-value=4.4e-20  Score=156.04  Aligned_cols=220  Identities=12%  Similarity=0.166  Sum_probs=157.6

Q ss_pred             EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeeecccCc-cceeEE
Q psy14961         36 SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQSFHGHT-GELMDL  113 (320)
Q Consensus        36 s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~-~~v~~~  113 (320)
                      .++.|+.|++||+...     ....+..|...+.++.|+++++++++++ ++.|++||+.+ ++.......+. ..+.++
T Consensus        17 ~~~~~~~i~~~d~~~~-----~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~   90 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTR-----KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDH   90 (297)
T ss_dssp             -CCCCEEEEEEETTTT-----EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred             CCCcceeEEEEeCCCC-----ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccce
Confidence            4567899999997532     1234556888999999999999999887 78999999998 77766655553 566777


Q ss_pred             EEeeCCCCCEEEEEeC--CCeEEEEeC--CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC
Q psy14961        114 DLAPSETGNTFVSGSS--DKLVNIWDM--RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS  189 (320)
Q Consensus       114 ~~~~~~~~~~l~s~~~--dg~i~lwd~--~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~  189 (320)
                      +|+  ++++.|++++.  ++..++|.+  .++.                            ...+..+ ..+..++|+|+
T Consensus        91 ~~s--pdg~~l~~~~~~~~~~~~l~~~~~~~~~----------------------------~~~~~~~-~~~~~~~~spd  139 (297)
T 2ojh_A           91 GIS--PDGALYAISDKVEFGKSAIYLLPSTGGT----------------------------PRLMTKN-LPSYWHGWSPD  139 (297)
T ss_dssp             EEC--TTSSEEEEEECTTTSSCEEEEEETTCCC----------------------------CEECCSS-SSEEEEEECTT
T ss_pred             EEC--CCCCEEEEEEeCCCCcceEEEEECCCCc----------------------------eEEeecC-CCccceEECCC
Confidence            774  56889998883  344444433  3221                            1112222 24788999999


Q ss_pred             CCEEE-EeeCCCeEEEEECC--CCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCC-CCeEEEEeecCC
Q psy14961        190 GDAVA-TGSDDATCRLFDLR--ADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSL-KCCRVNHLMGHE  264 (320)
Q Consensus       190 g~~l~-s~s~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~-~~~~~~~~~~h~  264 (320)
                      |+.|+ +++.|+.+++|+++  +++.. ......  ..+..+.|+|+|++|+.++ .++.+.+|+.. .......+..|.
T Consensus       140 g~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  216 (297)
T 2ojh_A          140 GKSFTYCGIRDQVFDIYSMDIDSGVET-RLTHGE--GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA  216 (297)
T ss_dssp             SSEEEEEEEETTEEEEEEEETTTCCEE-ECCCSS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred             CCEEEEEECCCCceEEEEEECCCCcce-EcccCC--CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence            99887 78889999999853  33332 222211  2357789999999888766 58899999864 344566677888


Q ss_pred             CceeEEEECcCCCeEEEecCC-----------CceEeeecch
Q psy14961        265 NRVSCLQVSPDGTAFSSGSWD-----------TTLRDEESKN  295 (320)
Q Consensus       265 ~~i~~i~~s~~~~~l~s~s~D-----------~~ir~~~~~~  295 (320)
                      ..+.+++|+|||++|+.++.|           ..|++|+...
T Consensus       217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~  258 (297)
T 2ojh_A          217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG  258 (297)
T ss_dssp             EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred             cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence            899999999999999998876           5689998654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.86  E-value=1.4e-19  Score=156.60  Aligned_cols=231  Identities=13%  Similarity=0.156  Sum_probs=153.8

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-CeEEEEECC--Ccc--eeeecccCc
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-CTCALWDVE--SSQ--LLQSFHGHT  107 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~--~~~~~~~~~  107 (320)
                      ++++++.|+.|++|+++.... ... .....+...+.++.|+++++++++++.+ +.|++|+++  ++.  .+..+..+.
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   84 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGA-LTL-TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG   84 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSC-EEE-EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred             EEEeCCCCCeEEEEEECCCCc-EEE-eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence            444557899999999853111 111 1223466678889999999999988876 999999987  444  334444333


Q ss_pred             cceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE
Q psy14961        108 GELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF  186 (320)
Q Consensus       108 ~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~  186 (320)
                       .+..+++  +++++.+++++. ++.|.+||+..+...                        .....+.. ...+.+++|
T Consensus        85 -~~~~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~------------------------~~~~~~~~-~~~~~~~~~  136 (343)
T 1ri6_A           85 -SLTHIST--DHQGQFVFVGSYNAGNVSVTRLEDGLPV------------------------GVVDVVEG-LDGCHSANI  136 (343)
T ss_dssp             -CCSEEEE--CTTSSEEEEEETTTTEEEEEEEETTEEE------------------------EEEEEECC-CTTBCCCEE
T ss_pred             -CCcEEEE--cCCCCEEEEEecCCCeEEEEECCCCccc------------------------cccccccC-CCCceEEEE
Confidence             5666766  456887766654 788999997432211                        11112222 234778999


Q ss_pred             cCCCCEEEEee-CCCeEEEEECCC-CeeEeE----EecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCC--CeE-
Q psy14961        187 HPSGDAVATGS-DDATCRLFDLRA-DKEVAC----YKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLK--CCR-  256 (320)
Q Consensus       187 ~p~g~~l~s~s-~dg~i~iwd~~~-~~~~~~----~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~--~~~-  256 (320)
                      +|+|+++++++ .++.|.+||+.+ ++....    .... ....+..++|+|+++++++++ .++.|.+||...  +.. 
T Consensus       137 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~  215 (343)
T 1ri6_A          137 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV-EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE  215 (343)
T ss_dssp             CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS-TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred             CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccC-CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence            99999887776 899999999987 433221    1111 112356789999999776554 789999999843  221 


Q ss_pred             -EEEee----cC--CCceeEEEECcCCCeEE-EecCCCceEeeecc
Q psy14961        257 -VNHLM----GH--ENRVSCLQVSPDGTAFS-SGSWDTTLRDEESK  294 (320)
Q Consensus       257 -~~~~~----~h--~~~i~~i~~s~~~~~l~-s~s~D~~ir~~~~~  294 (320)
                       .....    ++  ...+.+++|+|||++|+ +++.|+.|++|+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~  261 (343)
T 1ri6_A          216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS  261 (343)
T ss_dssp             EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence             22222    11  23577899999998766 66689999999976

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.86  E-value=1.4e-19  Score=157.06  Aligned_cols=235  Identities=9%  Similarity=0.040  Sum_probs=160.1

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEE-EeCCCeEEEEECCCcceee
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILT-GSGDCTCALWDVESSQLLQ  101 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~  101 (320)
                      .+++++++.++++++.++.|.+||+...    .....+..+. .....+.|+++++.+++ +..++.|.+||+.+++.+.
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~   79 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASD----TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF   79 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTT----EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCC----cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence            4568889999999999999999997532    1222232222 14567889999886654 4568999999999888776


Q ss_pred             ecccCc------cceeEEEEeeCCCCCEEEEEeCC------------CeEEEEeCCCCcEEEEeccCCccccCCCeEEEE
Q psy14961        102 SFHGHT------GELMDLDLAPSETGNTFVSGSSD------------KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIW  163 (320)
Q Consensus       102 ~~~~~~------~~v~~~~~~~~~~~~~l~s~~~d------------g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iw  163 (320)
                      .+....      ..+..+++  +++|+.+++++.+            +.|.+||+.+++.                    
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--------------------  137 (349)
T 1jmx_B           80 HANLSSVPGEVGRSMYSFAI--SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--------------------  137 (349)
T ss_dssp             EEESCCSTTEEEECSSCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--------------------
T ss_pred             EEEcccccccccccccceEE--CCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--------------------
Confidence            654322      22555666  5578899988755            5566666544321                    


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-----------------------
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-----------------------  220 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------------------  220 (320)
                          .+.+..+. +...+.+++|+|+|+ +++++.  .|.+||+.+++....+....                       
T Consensus       138 ----~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (349)
T 1jmx_B          138 ----AKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHE  209 (349)
T ss_dssp             ----BCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCE
T ss_pred             ----cceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCccee
Confidence                11111222 223567888999888 555443  38888887776554433211                       


Q ss_pred             --c-----------------------------------------eeeeEEEEEec-CCcEEEEEeCCCeEEEEcCCCCeE
Q psy14961        221 --I-----------------------------------------LFGATSVDFSV-SGRLLFAGYNDYTINVWDSLKCCR  256 (320)
Q Consensus       221 --~-----------------------------------------~~~~~~~~~s~-~~~~l~~g~~dg~v~~wd~~~~~~  256 (320)
                        .                                         ......+.|+| ++++++++  ++.|.+||+.+++.
T Consensus       210 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~  287 (349)
T 1jmx_B          210 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL  287 (349)
T ss_dssp             EEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEE
T ss_pred             EEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeE
Confidence              0                                         00124567789 99999888  88999999998877


Q ss_pred             EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +..+.. ...+.+++|+|||++|++++.++.|++|+.+.
T Consensus       288 ~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~  325 (349)
T 1jmx_B          288 IKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT  325 (349)
T ss_dssp             EEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred             EEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence            766653 34578999999999998899999999999754

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.86  E-value=1.8e-20  Score=178.93  Aligned_cols=254  Identities=8%  Similarity=0.001  Sum_probs=165.7

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCCCCEEEEEeCC---------CeE
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNSDQQILTGSGD---------CTC   89 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~d---------g~v   89 (320)
                      ..+++|+|||+++++ +.||.|++||+.....    ...+..|..   .+.++.|++++++|++++.+         +.+
T Consensus        19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i   93 (723)
T 1xfd_A           19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY   93 (723)
T ss_dssp             CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred             ccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence            467889999997766 7899999999864322    223334443   38899999999999998774         788


Q ss_pred             EEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         90 ALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        90 ~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                      .+||+.+++.  +.....|...+..++|  +|+|+.|+.++. +.|++||+.++........+...+      .......
T Consensus        94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~--SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~------~~~g~~~  164 (723)
T 1xfd_A           94 VLSKIPHGDPQSLDPPEVSNAKLQYAGW--GPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGV------IYNGLSD  164 (723)
T ss_dssp             EEEESSSCCCEECCCTTCCSCCCSBCCB--CSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTT------EEEEECC
T ss_pred             EEEECCCCceEeccCCccccccccccEE--CCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCc------eECcccc
Confidence            8999998875  2222233334666655  567999998876 789999998876544332211100      0000000


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC----------------------------------eEEEEECCCCeeE
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA----------------------------------TCRLFDLRADKEV  213 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg----------------------------------~i~iwd~~~~~~~  213 (320)
                        -+.. +.-...+.+++|+|||++|++++.|+                                  .|.+||+.+++..
T Consensus       165 --~v~~-ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~  241 (723)
T 1xfd_A          165 --WLYE-EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD  241 (723)
T ss_dssp             --HHHH-HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC
T ss_pred             --eeEE-EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee
Confidence              0000 00012347899999999998887543                                  7999999877643


Q ss_pred             eEEecCc----ceeeeEEEEEecCCcEEEEEeC----CCeEEEEcCCCCeEEEEeec-CCCcee----EEEECcCCCeEE
Q psy14961        214 ACYKKDS----ILFGATSVDFSVSGRLLFAGYN----DYTINVWDSLKCCRVNHLMG-HENRVS----CLQVSPDGTAFS  280 (320)
Q Consensus       214 ~~~~~~~----~~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd~~~~~~~~~~~~-h~~~i~----~i~~s~~~~~l~  280 (320)
                      .......    ....+..++|||||++|++...    +..|.+||..++.....+.. |...+.    .++|||||+.|+
T Consensus       242 ~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~  321 (723)
T 1xfd_A          242 LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF  321 (723)
T ss_dssp             EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred             EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEE
Confidence            3332211    0123578999999999877653    35799999888765544433 444443    899999999877


Q ss_pred             E--ecCCC------ceEeee
Q psy14961        281 S--GSWDT------TLRDEE  292 (320)
Q Consensus       281 s--~s~D~------~ir~~~  292 (320)
                      .  +..|+      .|.+|+
T Consensus       322 ~~~~~~~~~~~~~~~l~~~d  341 (723)
T 1xfd_A          322 FIRAIPQGGRGKFYHITVSS  341 (723)
T ss_dssp             EEEEECCSSSSCEEEEEEEC
T ss_pred             EEEecccCCCcceeEEEEEe
Confidence            5  45666      466676

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.85  E-value=2.7e-20  Score=167.29  Aligned_cols=208  Identities=14%  Similarity=0.063  Sum_probs=145.8

Q ss_pred             cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc----------eeee-----cccCccceeEEEEeeCCCCCEEE----E
Q psy14961         66 SFISCCIFPNSDQQILTGSGDCTCALWDVESSQ----------LLQS-----FHGHTGELMDLDLAPSETGNTFV----S  126 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----------~~~~-----~~~~~~~v~~~~~~~~~~~~~l~----s  126 (320)
                      ..+..+++++++..+++++.|+ +++|+.....          .+..     ...+...|.+++|+  ++|++|+    +
T Consensus        37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s--pdg~~lav~~~s  113 (434)
T 2oit_A           37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALS--CDNLTLSACMMS  113 (434)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEEC--TTSCEEEEEEEE
T ss_pred             CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEc--CCCCEEEEEEec
Confidence            3567788888889999999887 8898753210          0110     01245668888775  4688999    7


Q ss_pred             EeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEE
Q psy14961        127 GSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLF  205 (320)
Q Consensus       127 ~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iw  205 (320)
                      ++.|+.|++||+.++..     +...   ..        +.......+.+|...|.+++|+|+ +.+|++++.||+|++|
T Consensus       114 gs~d~~v~iwd~~~~~~-----~~~~---~~--------~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw  177 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSN-----EAKQ---QK--------RPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL  177 (434)
T ss_dssp             TTTEEEEEEEEHHHHHC-----TTCS---SC--------CCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred             cCCCceEEEEEcccccc-----CCcC---Cc--------ceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence            88999999999865310     0000   00        001123445679999999999998 7899999999999999


Q ss_pred             ECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-------CCceeEEEECcCCCe
Q psy14961        206 DLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-------ENRVSCLQVSPDGTA  278 (320)
Q Consensus       206 d~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-------~~~i~~i~~s~~~~~  278 (320)
                      |++++........+.  ..+.+++|+|+|++|++|+.||.|++||.. +.....+..|       ...|.+++|++++.+
T Consensus       178 D~~~~~~~~~~~~~~--~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~  254 (434)
T 2oit_A          178 QVTETVKVCATLPST--VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF  254 (434)
T ss_dssp             EESSSEEEEEEECGG--GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred             EcCCCcceeeccCCC--CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence            999875543333222  246789999999999999999999999987 4444444433       338999999999887


Q ss_pred             EEEec-CCCc------eEeeecch
Q psy14961        279 FSSGS-WDTT------LRDEESKN  295 (320)
Q Consensus       279 l~s~s-~D~~------ir~~~~~~  295 (320)
                      +++.+ .|+.      +++|+..+
T Consensus       255 l~~~~~~dg~~~~~~~v~i~~l~~  278 (434)
T 2oit_A          255 AIVYAAADGTLETSPDVVMALLPK  278 (434)
T ss_dssp             EEEEEETTCCSSSCCEEEEEECCC
T ss_pred             EEEEccCCCccCCCCceEEEEecc
Confidence            75433 4433      77888654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.85  E-value=1.1e-18  Score=154.10  Aligned_cols=285  Identities=11%  Similarity=0.012  Sum_probs=179.9

Q ss_pred             EeecccceeEEEEEeCccceEE-----EEEcCCCCEEEEecC-CCe--EEEEEecccCCcccccccccccccCeEEEEec
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMA-----CAYAPSGSVVASGGL-DNK--VTVYAIALEDDSSAKKKTVATHTSFISCCIFP   74 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~-----~~~~~~~~~l~s~~~-dg~--i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~   74 (320)
                      ++|..++.....++.+...+..     .+|+|||++|+.++. ++.  |.+||+..  .  ........+...+....|+
T Consensus        14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g--~~~~lt~~~~~~~~~~~~s   89 (388)
T 3pe7_A           14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT--Q--VATQLTEGRGDNTFGGFLS   89 (388)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--C--EEEECCCSSCBCSSSCEEC
T ss_pred             EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC--C--ceEEeeeCCCCCccceEEc
Confidence            3466667666666555444444     789999999998887 675  55555532  1  1222233444444456799


Q ss_pred             CCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE----------------------eCCCe
Q psy14961         75 NSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG----------------------SSDKL  132 (320)
Q Consensus        75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~----------------------~~dg~  132 (320)
                      ++++.|+.++.++.+++||+.+++....+..+...+....+..++++..++..                      ..+..
T Consensus        90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (388)
T 3pe7_A           90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR  169 (388)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence            99999999999999999999998776655555554544555557788887742                      24467


Q ss_pred             EEEEeCCCCcEEEEe-----------cc-CCccc---cC------CCeEEEEECcCCeeeeeecCCC--CCeEEEEEcCC
Q psy14961        133 VNIWDMRTGYCVQSF-----------EG-HHNLI---TD------DKLVNIWDMRTGYCVQSFEGHQ--SDVNSVKFHPS  189 (320)
Q Consensus       133 i~lwd~~~~~~~~~~-----------~~-~~~~~---~~------d~~i~iwd~~~~~~~~~~~~~~--~~v~~v~~~p~  189 (320)
                      |.+||+.+++.....           .+ ....+   ..      ...|.++|...+.. ..+..+.  ..+..++|+|+
T Consensus       170 l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spd  248 (388)
T 3pe7_A          170 LMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPD  248 (388)
T ss_dssp             EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTT
T ss_pred             EEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCC
Confidence            999999887643321           11 11111   11      23566677655433 3333333  35778999999


Q ss_pred             CCEEEEeeC-CC----eEEEEECCCCeeEeEEecCcce---eeeEEEEEecCCcEEEEE---------eCCCeEEEEcCC
Q psy14961        190 GDAVATGSD-DA----TCRLFDLRADKEVACYKKDSIL---FGATSVDFSVSGRLLFAG---------YNDYTINVWDSL  252 (320)
Q Consensus       190 g~~l~s~s~-dg----~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~g---------~~dg~v~~wd~~  252 (320)
                      |+.|+..+. ++    .|.+||+.+++...........   .......|+|||+.|+..         ..+..|.+||..
T Consensus       249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~  328 (388)
T 3pe7_A          249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK  328 (388)
T ss_dssp             SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred             CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence            997755442 22    3999999988653322221100   001123699999988754         446689999988


Q ss_pred             CCeEEEEeecCCC-----------ceeEEEECcCCCeEEEec-CCCceEeeec
Q psy14961        253 KCCRVNHLMGHEN-----------RVSCLQVSPDGTAFSSGS-WDTTLRDEES  293 (320)
Q Consensus       253 ~~~~~~~~~~h~~-----------~i~~i~~s~~~~~l~s~s-~D~~ir~~~~  293 (320)
                      .+.. ..+..|..           .+.+++|+|||+.|+.++ .++...+|..
T Consensus       329 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          329 NGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             TTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             CCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence            7654 44555655           578899999999877665 5777777654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.85  E-value=3e-18  Score=150.51  Aligned_cols=247  Identities=11%  Similarity=0.024  Sum_probs=161.1

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE--EEEEe-------------
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ--ILTGS-------------   84 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s~~-------------   84 (320)
                      ..+..++|+|+|++|++++.+ .+.+|+++... ..........+ +....+.+++++++  +++++             
T Consensus        40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  116 (365)
T 1jof_A           40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence            356789999999999999887 99999985211 11111111111 22445778898884  44553             


Q ss_pred             CCCeEEEEECC-Ccceeeecc----cCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCC-CCcEEEEeccCCccccCC
Q psy14961         85 GDCTCALWDVE-SSQLLQSFH----GHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMR-TGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        85 ~dg~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~-~~~~~~~~~~~~~~~~~d  157 (320)
                      .++.+.+|++. .++....+.    .+...+.++++  +++|++++++.. ++.|++||+. +++...            
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--spdG~~l~~~~~~~~~v~~~~~~~~g~~~~------------  182 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVF--DPTETYLYSADLTANKLWTHRKLASGEVEL------------  182 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEECTTSCEEE------------
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEE--CCCCCEEEEEcCCCCEEEEEEECCCCCEEE------------
Confidence            68999999997 355443332    13445666666  567888887654 6789999986 554211            


Q ss_pred             CeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECC--CCeeEe---EEecCcc----ee--
Q psy14961        158 KLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLR--ADKEVA---CYKKDSI----LF--  223 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~--~~~~~~---~~~~~~~----~~--  223 (320)
                                   +..+  ..|...+..++|+|+|+++++++. ++.+.+|+++  +++...   .......    ..  
T Consensus       183 -------------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~  249 (365)
T 1jof_A          183 -------------VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE  249 (365)
T ss_dssp             -------------EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred             -------------eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence                         0111  123456889999999999887765 7899999875  344321   1111100    01  


Q ss_pred             -----eeEEEE-EecCCcEEEEEeCC-C-----eEEEEcCC-CCeEEE---EeecCCCceeEEEECc---CCCeEEEecC
Q psy14961        224 -----GATSVD-FSVSGRLLFAGYND-Y-----TINVWDSL-KCCRVN---HLMGHENRVSCLQVSP---DGTAFSSGSW  284 (320)
Q Consensus       224 -----~~~~~~-~s~~~~~l~~g~~d-g-----~v~~wd~~-~~~~~~---~~~~h~~~i~~i~~s~---~~~~l~s~s~  284 (320)
                           .+..++ |+|||++|+++..+ .     .|.+|++. ++....   ....+...+..++|+|   ||++|++++.
T Consensus       250 ~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~  329 (365)
T 1jof_A          250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD  329 (365)
T ss_dssp             TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred             cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc
Confidence                 356789 99999998877542 2     89999975 444332   1333555678899999   8999999987


Q ss_pred             C-CceEeeecchH
Q psy14961        285 D-TTLRDEESKNR  296 (320)
Q Consensus       285 D-~~ir~~~~~~~  296 (320)
                      + ++|++|+....
T Consensus       330 ~~~~v~v~~~~~~  342 (365)
T 1jof_A          330 QEGWLEIYRWKDE  342 (365)
T ss_dssp             SSCEEEEEEEETT
T ss_pred             CCCeEEEEEEchh
Confidence            5 89999987544

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.83  E-value=5.2e-18  Score=147.13  Aligned_cols=248  Identities=13%  Similarity=0.087  Sum_probs=168.5

Q ss_pred             CeEeecccceeEEEEEeCc-cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCccccccccc-cc-----ccCeEEEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPA-TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVA-TH-----TSFISCCI   72 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~-~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h-----~~~v~~~~   72 (320)
                      |.+||..+++....+..+. ..+..++|+|+|++++ ++..++.|.+||+....    ....+. .+     ...+..+.
T Consensus        23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~----~~~~~~~~~~~~~~~~~~~~~~   98 (349)
T 1jmx_B           23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK----NTFHANLSSVPGEVGRSMYSFA   98 (349)
T ss_dssp             EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEESCCSTTEEEECSSCEE
T ss_pred             EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc----EEEEEEcccccccccccccceE
Confidence            4689999888776666543 1567899999998654 55678999999975321    111222 11     22367788


Q ss_pred             ecCCCCEEEEEeCC------------CeEEEEECCCccee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         73 FPNSDQQILTGSGD------------CTCALWDVESSQLL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        73 ~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      |+++++++++++.+            +.|.+||+.+++..   ..+. +...+.++++  +++|+ +++++.+  |.+||
T Consensus        99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~--s~dg~-l~~~~~~--i~~~d  172 (349)
T 1jmx_B           99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRA--ADDGS-LYVAGPD--IYKMD  172 (349)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEE--CTTSC-EEEESSS--EEEEC
T ss_pred             ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeE--CCCCc-EEEccCc--EEEEe
Confidence            99999999988865            89999999885433   2333 2335666666  45677 6655443  99999


Q ss_pred             CCCCcEEEEeccCCcc-----------------------------ccCC-----------CeEEEEECcCCee-eeeecC
Q psy14961        138 MRTGYCVQSFEGHHNL-----------------------------ITDD-----------KLVNIWDMRTGYC-VQSFEG  176 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~-----------------------------~~~d-----------~~i~iwd~~~~~~-~~~~~~  176 (320)
                      +.+++.+..+......                             ...+           ..+..+|..+++. ...+..
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (349)
T 1jmx_B          173 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD  252 (349)
T ss_dssp             TTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE
T ss_pred             CCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc
Confidence            9998877766432100                             0000           0111244444432 122233


Q ss_pred             CCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        177 HQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       177 ~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      +...+.+++|+| +|++++++  ++.|.+||+.+++.+..+....   .+..++|+|+|++|++++.++.|.+||..+.+
T Consensus       253 ~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~  327 (349)
T 1jmx_B          253 LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE  327 (349)
T ss_dssp             CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred             CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence            555788999999 99998888  8899999999988766554332   24578999999998888889999999999888


Q ss_pred             EEEEeecC
Q psy14961        256 RVNHLMGH  263 (320)
Q Consensus       256 ~~~~~~~h  263 (320)
                      .+..+..+
T Consensus       328 ~~~~~~~~  335 (349)
T 1jmx_B          328 KVKNIKLP  335 (349)
T ss_dssp             EEEEEECS
T ss_pred             eeeeeecC
Confidence            77766543

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.83  E-value=5.9e-19  Score=164.43  Aligned_cols=246  Identities=12%  Similarity=0.072  Sum_probs=165.4

Q ss_pred             eEeecccceeEEEEEeCc-cceEEEEEcCCCCEEEEecC---CCeEEEEEecc--cCCcccccccccccccCeEEEEecC
Q psy14961          2 IIWDGLTQTKEHSVTMPA-TWVMACAYAPSGSVVASGGL---DNKVTVYAIAL--EDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~-~~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      .||++.+++. ..+..+. ..|.+++|+|| +++++++.   +....+|.++.  .....    .+.... ......|++
T Consensus        47 ~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~----~l~~~~-~~~~~~~s~  119 (582)
T 3o4h_A           47 NAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ----RLEAVK-PMRILSGVD  119 (582)
T ss_dssp             EEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE----ECTTSC-SBEEEEEEE
T ss_pred             eEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc----cccCCC-CceeeeeCC
Confidence            5899755443 3444444 58899999999 77777765   55678887764  22211    222221 233456666


Q ss_pred             CCC-EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC----CeEEEEeCCCCcEEEEeccC
Q psy14961         76 SDQ-QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----KLVNIWDMRTGYCVQSFEGH  150 (320)
Q Consensus        76 ~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~lwd~~~~~~~~~~~~~  150 (320)
                      +++ .+++.+.++.+.+||+.+++.......+ .  .++.++  |+|+.|++++.+    +.|++||+.+++.       
T Consensus       120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~s--pDG~~la~~~~~~~~~~~i~~~d~~~g~~-------  187 (582)
T 3o4h_A          120 TGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSD--IRGDLIAGLGFFGGGRVSLFTSNLSSGGL-------  187 (582)
T ss_dssp             CSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEE--EETTEEEEEEEEETTEEEEEEEETTTCCC-------
T ss_pred             CCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEEC--CCCCEEEEEEEcCCCCeEEEEEcCCCCCc-------
Confidence            664 3445455555669999888765443322 2  555554  579999988766    5677777655432       


Q ss_pred             CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC--eEEEEECCCCeeEeEEecCcc-e-----
Q psy14961        151 HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA--TCRLFDLRADKEVACYKKDSI-L-----  222 (320)
Q Consensus       151 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~-~-----  222 (320)
                                           ..+..|...+.+++|+|||+.|+++..++  .|++||+.+++.. ....+.. .     
T Consensus       188 ---------------------~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~  245 (582)
T 3o4h_A          188 ---------------------RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRP  245 (582)
T ss_dssp             ---------------------EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCC
T ss_pred             ---------------------eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhh
Confidence                                 13345667789999999999999888888  8999999987765 3332211 1     


Q ss_pred             eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCc---eEeeecc
Q psy14961        223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT---LRDEESK  294 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~---ir~~~~~  294 (320)
                      .......|+|||.++++++.++++++|++  ++...   .+...|.+++|+ |++++++++.+.+   +.+++..
T Consensus       246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~  314 (582)
T 3o4h_A          246 TAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG  314 (582)
T ss_dssp             SEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred             ccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence            01123339999999999999999999998  54443   345789999999 9999999988755   5666643

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.82  E-value=4.8e-17  Score=142.66  Aligned_cols=263  Identities=12%  Similarity=0.077  Sum_probs=180.7

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCcccccccccc------c
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVAT------H   64 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~------h   64 (320)
                      +.+||..+++....+.....+  .++|+|||++++.++          .++.|.+||....    ....++..      +
T Consensus        33 v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~----~~~~~i~~~~~~~~~  106 (361)
T 2oiz_A           33 VHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL----TFEKEISLPPKRVQG  106 (361)
T ss_dssp             EEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC----CEEEEEEECTTBCCB
T ss_pred             EEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC----cEEEEEEcCcccccc
Confidence            358998888877666655444  899999999999886          3677999987421    11122211      1


Q ss_pred             ccCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeee-cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-
Q psy14961         65 TSFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT-  140 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~-  140 (320)
                      ......+.+++++++|+++..  +++|.+||+.+++.+.. +...  ....+.+.|.. ...+++.+.||.+.+|++.. 
T Consensus       107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~  183 (361)
T 2oiz_A          107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNR-PRSFMTICGDGGLLTINLGED  183 (361)
T ss_dssp             CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTS-SSEEEEEETTSSEEEEEECTT
T ss_pred             CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCC-CeeEEEECCCCcEEEEEECCC
Confidence            233456889999999998874  58999999999988777 5532  12223344432 25778888999999998754 


Q ss_pred             CcEEEEe------ccCC--------------ccccCCCeEEEEECcCCee--eeeecC------C----CCCeEEEEEcC
Q psy14961        141 GYCVQSF------EGHH--------------NLITDDKLVNIWDMRTGYC--VQSFEG------H----QSDVNSVKFHP  188 (320)
Q Consensus       141 ~~~~~~~------~~~~--------------~~~~~d~~i~iwd~~~~~~--~~~~~~------~----~~~v~~v~~~p  188 (320)
                      ++.....      ....              ..+..++.+.++|+.....  ...+.-      +    ......++|+|
T Consensus       184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~  263 (361)
T 2oiz_A          184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR  263 (361)
T ss_dssp             SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred             CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence            4443111      1100              1123456788888865421  111110      0    01111378999


Q ss_pred             CCCEEEEeeC-----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC--e
Q psy14961        189 SGDAVATGSD-----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC--C  255 (320)
Q Consensus       189 ~g~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~--~  255 (320)
                      +++.++.+..           .++|.+||+.+.+.+..++...    +..++|+|+|++|++++. ++|.+||..++  +
T Consensus       264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~  338 (361)
T 2oiz_A          264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPK  338 (361)
T ss_dssp             TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCE
T ss_pred             CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcce
Confidence            9888766542           3589999999998887776554    578899999999998886 99999999999  8


Q ss_pred             EEEEeecCCCceeEEEECcCCC
Q psy14961        256 RVNHLMGHENRVSCLQVSPDGT  277 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~~~~  277 (320)
                      .+.++.++......++++|||+
T Consensus       339 ~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          339 LLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             EEEEETTSCSSEEEEEECCCSC
T ss_pred             eeEEeccCCCCcEEEEecCCCC
Confidence            8888777888889999999986

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.79  E-value=4.8e-16  Score=131.46  Aligned_cols=241  Identities=12%  Similarity=0.146  Sum_probs=163.6

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc---ccccccCeEEEEe-cCCCCEEEEEeC-CCeEEEEEC
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT---VATHTSFISCCIF-PNSDQQILTGSG-DCTCALWDV   94 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~---~~~h~~~v~~~~~-~~~~~~l~s~~~-dg~v~iwd~   94 (320)
                      ....+++++++++++++...++.|.+|+....  .......   ...+......+.+ .+++..+++... ++.|.+|| 
T Consensus        30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-  106 (286)
T 1q7f_A           30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-  106 (286)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred             CCCceEEECCCCCEEEEECCCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence            45789999999998888888999999986421  1111100   0123456778888 455544444433 88999999 


Q ss_pred             CCcceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         95 ESSQLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        95 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      .+++.+..+.. +...+..+++  +++|+.+++...++.|.+||.. +..+..+.                         
T Consensus       107 ~~g~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-------------------------  158 (286)
T 1q7f_A          107 QYGQFVRKFGATILQHPRGVTV--DNKGRIIVVECKVMRVIIFDQN-GNVLHKFG-------------------------  158 (286)
T ss_dssp             TTSCEEEEECTTTCSCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEEE-------------------------
T ss_pred             CCCcEEEEecCccCCCceEEEE--eCCCCEEEEECCCCEEEEEcCC-CCEEEEeC-------------------------
Confidence            45665555532 2344566655  5568877777778889999854 33322221                         


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC-eEEEEcCC
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-TINVWDSL  252 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-~v~~wd~~  252 (320)
                      ..++...+..++++|+|+.+++.+.++.|.+||... +.+..+........+..++++|+|.++++...++ .|.+||..
T Consensus       159 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~  237 (286)
T 1q7f_A          159 CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD  237 (286)
T ss_dssp             CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred             CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence            012334578999999999888888899999999754 4444443322122457899999999888887775 99999954


Q ss_pred             CCeEEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        253 KCCRVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       253 ~~~~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                       +..+..+..+..  .+.+++++|+|+++++ +.|++|++|+..
T Consensus       238 -g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~  279 (286)
T 1q7f_A          238 -GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV  279 (286)
T ss_dssp             -SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred             -CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence             455555655433  4789999999998887 579999999863

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.79  E-value=8.2e-17  Score=140.85  Aligned_cols=237  Identities=11%  Similarity=0.148  Sum_probs=147.7

Q ss_pred             cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC----CeEEEEECCC--cce--eeecccCccc
Q psy14961         38 GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD----CTCALWDVES--SQL--LQSFHGHTGE  109 (320)
Q Consensus        38 ~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~v~iwd~~~--~~~--~~~~~~~~~~  109 (320)
                      +.++.|.+|.++............  +......+.|++++++|++++.+    +.|.+|+++.  +.+  +.....+...
T Consensus        24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~  101 (361)
T 3scy_A           24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD  101 (361)
T ss_dssp             SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred             CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence            346789999886432222222222  55666778999999999999886    7999998765  432  2333323334


Q ss_pred             eeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        110 LMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      ...+++    +++.+++++ .++.+.+|++.....+..+.            ..... .+.-......+...+.+++|+|
T Consensus       102 p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~------------~~~~~-~g~~~~~~~~~~~~~~~~~~sp  164 (361)
T 3scy_A          102 PCYLTT----NGKNIVTANYSGGSITVFPIGQDGALLPAS------------DVIEF-KGSGPDKERQTMPHLHCVRITP  164 (361)
T ss_dssp             EEEEEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCS------------EEEEC-CCCCSCTTTCSSCCEEEEEECT
T ss_pred             cEEEEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccc------------eeEEc-cCCCCCccccCCCcceEEEECC
Confidence            444443    567777665 67899999986432211100            00000 0000000112334578899999


Q ss_pred             CCCEEEEee-CCCeEEEEECCCCee------Ee------EEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCC
Q psy14961        189 SGDAVATGS-DDATCRLFDLRADKE------VA------CYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKC  254 (320)
Q Consensus       189 ~g~~l~s~s-~dg~i~iwd~~~~~~------~~------~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~  254 (320)
                      +|+++++++ .++.+.+|++.....      +.      .... .....+..++|+|+|++|++++ .++.|.+||...+
T Consensus       165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g  243 (361)
T 3scy_A          165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG  243 (361)
T ss_dssp             TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred             CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence            999765554 588999998875431      11      1111 1112356799999999888777 6899999997755


Q ss_pred             eE--EEEe---ecCCCceeEEEECcCCCeEEEecC--CCceEeeecc
Q psy14961        255 CR--VNHL---MGHENRVSCLQVSPDGTAFSSGSW--DTTLRDEESK  294 (320)
Q Consensus       255 ~~--~~~~---~~h~~~i~~i~~s~~~~~l~s~s~--D~~ir~~~~~  294 (320)
                      ..  +..+   ..+.....+++|+|||++|+.+..  +++|++|+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~  290 (361)
T 3scy_A          244 MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD  290 (361)
T ss_dssp             EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred             ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence            33  2223   233456789999999998866655  5899999974

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.79  E-value=1.2e-18  Score=166.29  Aligned_cols=242  Identities=12%  Similarity=0.074  Sum_probs=158.3

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCCCCEEEEEeC---------CCeEEE
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNSDQQILTGSG---------DCTCAL   91 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~---------dg~v~i   91 (320)
                      .++|+|+|++++++ .|+.|++|++....    ....+..|..   .+.++.|++++++|++++.         ++.|++
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~   94 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI   94 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence            67899999766655 59999999985322    1122223322   3889999999999998876         789999


Q ss_pred             EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-ccCCccccCCCeEEEEECcCCee
Q psy14961         92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      ||+.+++.+.... ....+..++|  +|+|+.|+.+. ++.|++||+.++...... .++..                  
T Consensus        95 ~d~~~g~~~~~~~-l~~~~~~~~~--SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~------------------  152 (719)
T 1z68_A           95 YDLSNGEFVRGNE-LPRPIQYLCW--SPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGREN------------------  152 (719)
T ss_dssp             EETTTTEECCSSC-CCSSBCCEEE--CSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTT------------------
T ss_pred             EECCCCcccccee-cCcccccceE--CCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcC------------------
Confidence            9999887631111 1245666666  55789998885 789999999887654321 11100                  


Q ss_pred             eeeecCCCCC---------eEEEEEcCCCCEEEEeeCCC----------------------------------eEEEEEC
Q psy14961        171 VQSFEGHQSD---------VNSVKFHPSGDAVATGSDDA----------------------------------TCRLFDL  207 (320)
Q Consensus       171 ~~~~~~~~~~---------v~~v~~~p~g~~l~s~s~dg----------------------------------~i~iwd~  207 (320)
                       ..+.+|...         ..+++|+|||++|++++.|.                                  .|++||+
T Consensus       153 -~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~  231 (719)
T 1z68_A          153 -KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT  231 (719)
T ss_dssp             -TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred             -CeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence             011223222         25799999999999887552                                  7889999


Q ss_pred             CCCeeE--eEEec----CcceeeeEEEEEecCCcEEEEEeCC----CeEEEEc----CCCCeEEEEe----ecCCCcee-
Q psy14961        208 RADKEV--ACYKK----DSILFGATSVDFSVSGRLLFAGYND----YTINVWD----SLKCCRVNHL----MGHENRVS-  268 (320)
Q Consensus       208 ~~~~~~--~~~~~----~~~~~~~~~~~~s~~~~~l~~g~~d----g~v~~wd----~~~~~~~~~~----~~h~~~i~-  268 (320)
                      .+++..  .....    ......+..++||||++++++....    ..|.+||    ..++.....+    .+|...+. 
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~  311 (719)
T 1z68_A          232 TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGG  311 (719)
T ss_dssp             SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSS
T ss_pred             CCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEcc
Confidence            876532  11110    0111235788999998887775432    3488899    7666554434    46777777 


Q ss_pred             ----EEEECcCCCeEEE--ecCCCc--eEeeec
Q psy14961        269 ----CLQVSPDGTAFSS--GSWDTT--LRDEES  293 (320)
Q Consensus       269 ----~i~~s~~~~~l~s--~s~D~~--ir~~~~  293 (320)
                          .++|+|||+.|+.  +..++.  |.+|+.
T Consensus       312 ~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~  344 (719)
T 1z68_A          312 FFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD  344 (719)
T ss_dssp             SSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred             ccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence                8999999996554  445564  555553

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.79  E-value=4.4e-18  Score=162.38  Aligned_cols=283  Identities=7%  Similarity=-0.032  Sum_probs=175.8

Q ss_pred             CeEeecccceeEEEEEeCcc---ceEEEEEcCCCCEEEEecC---------CCeEEEEEecccCCcccccccccccccCe
Q psy14961          1 MIIWDGLTQTKEHSVTMPAT---WVMACAYAPSGSVVASGGL---------DNKVTVYAIALEDDSSAKKKTVATHTSFI   68 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~---~V~~~~~~~~~~~l~s~~~---------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v   68 (320)
                      |++||..+++....+..+..   .|.+++|||||++|++++.         ++.|++||+.....  .....+   ...+
T Consensus        38 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~--~~~~~l---~~~~  112 (719)
T 1z68_A           38 IVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF--VRGNEL---PRPI  112 (719)
T ss_dssp             EEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE--CCSSCC---CSSB
T ss_pred             EEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc--ccceec---Cccc
Confidence            46899988876543333322   3889999999999998876         68999999853211  000112   2457


Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec-ccCccce-----------------eEEEEeeCCCCCEEEEEeCC
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF-HGHTGEL-----------------MDLDLAPSETGNTFVSGSSD  130 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~l~s~~~d  130 (320)
                      ..+.|+|+|+.|+.+. ++.|++|++.+++..... .++...+                 ..+.|  +|||+.|++++.|
T Consensus       113 ~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w--SPDG~~la~~~~d  189 (719)
T 1z68_A          113 QYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW--SPNGKFLAYAEFN  189 (719)
T ss_dssp             CCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE--CTTSSEEEEEEEE
T ss_pred             ccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE--CCCCCEEEEEEEC
Confidence            7899999999999886 789999999887664432 2222111                 34555  6679999988765


Q ss_pred             -CeEEEEeCC---CC--cEEEEeccCC-ccccCCCeEEEEECcCCeee--------eeecCCCCCeEEEEEcCCCCEEEE
Q psy14961        131 -KLVNIWDMR---TG--YCVQSFEGHH-NLITDDKLVNIWDMRTGYCV--------QSFEGHQSDVNSVKFHPSGDAVAT  195 (320)
Q Consensus       131 -g~i~lwd~~---~~--~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~~v~~v~~~p~g~~l~s  195 (320)
                       +.+.+|.+.   ..  .....+.-.. ........+++||+.+++..        ..+.+|...+.+++|+||++.+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~  269 (719)
T 1z68_A          190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQ  269 (719)
T ss_dssp             CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEE
T ss_pred             CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEE
Confidence             344444321   10  0111111000 00112347899999887642        223468888999999999877666


Q ss_pred             eeC--C--CeEEEEE----CCCCeeEeEEe----cCcceee---eEEEEEecCCcEEEE--EeCCC--eEEEEcCCCCeE
Q psy14961        196 GSD--D--ATCRLFD----LRADKEVACYK----KDSILFG---ATSVDFSVSGRLLFA--GYNDY--TINVWDSLKCCR  256 (320)
Q Consensus       196 ~s~--d--g~i~iwd----~~~~~~~~~~~----~~~~~~~---~~~~~~s~~~~~l~~--g~~dg--~v~~wd~~~~~~  256 (320)
                      ...  +  ..|.+||    +.+++......    .+.....   ...+.|+|||+.|+.  +..+|  .|.+||...+. 
T Consensus       270 ~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-  348 (719)
T 1z68_A          270 WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-  348 (719)
T ss_dssp             EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-
T ss_pred             EeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-
Confidence            432  2  2488899    76665433221    1111111   115689999996554  44555  56677876554 


Q ss_pred             EEEeecCCCceeEEEECcCCCeEEEecCC-----CceEeeec
Q psy14961        257 VNHLMGHENRVSCLQVSPDGTAFSSGSWD-----TTLRDEES  293 (320)
Q Consensus       257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D-----~~ir~~~~  293 (320)
                      ...+..+...+..+.++ +++.|+..+.+     ++.++|..
T Consensus       349 ~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~  389 (719)
T 1z68_A          349 AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI  389 (719)
T ss_dssp             CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred             eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence            34455666678888888 77776666554     78888874

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.79  E-value=1.9e-16  Score=137.06  Aligned_cols=251  Identities=15%  Similarity=0.102  Sum_probs=170.5

Q ss_pred             cceEEEEEcCCCCEEEEecCC------------------------CeEEEEEecccCCcccccccc-cccccCeEEEEec
Q psy14961         20 TWVMACAYAPSGSVVASGGLD------------------------NKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFP   74 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~d------------------------g~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~   74 (320)
                      ..+.+++++|+|+++++.+.+                        +.|.+||.....    ..... ..+......+.+.
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~p~gia~d   99 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE----ILQSSGKNLFYLPHGLSID   99 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC----EEEEECTTTCSSEEEEEEC
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe----EEeccCCCccCCceEEEEC
Confidence            468999999999999888777                        468888763211    11111 1333456788899


Q ss_pred             CCCCEEEEEeCCCeEEEEECCCcc-eeeec---------ccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcE
Q psy14961         75 NSDQQILTGSGDCTCALWDVESSQ-LLQSF---------HGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYC  143 (320)
Q Consensus        75 ~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~  143 (320)
                      ++++.+++...++.|++||.+... .+..+         ..+......+++.+. ++..+++.+ .++.|++|| ..+..
T Consensus       100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~~~~~~I~~~~-~~g~~  177 (329)
T 3fvz_A          100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDGYCNSRIVQFS-PSGKF  177 (329)
T ss_dssp             TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred             CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeCCCCCeEEEEc-CCCCE
Confidence            989888888888999999986542 34433         122334556666431 577777776 689999999 45555


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSIL  222 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~  222 (320)
                      +..+......   +              ....++-.....++++|+ +..+++...++.|++||..+++.+..+......
T Consensus       178 ~~~~~~~g~~---~--------------~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~  240 (329)
T 3fvz_A          178 VTQWGEESSG---S--------------SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG  240 (329)
T ss_dssp             EEEECEECCS---S--------------SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT
T ss_pred             EEEeccCCCC---C--------------CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC
Confidence            4443211000   0              000112234689999998 777788888999999999877776655432222


Q ss_pred             eeeEEEEEecCCcEEEEE-------eCCCeEEEEcCCCCeEEEEe---ecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        223 FGATSVDFSVSGRLLFAG-------YNDYTINVWDSLKCCRVNHL---MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g-------~~dg~v~~wd~~~~~~~~~~---~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ..+..++|+| +..++..       ..+..|.+||..++..+..+   .++...+.+|+++|+|.++++.+.+++|++|+
T Consensus       241 ~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~  319 (329)
T 3fvz_A          241 RNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT  319 (329)
T ss_dssp             TCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred             CCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence            2345778888 4333333       34558999998888888776   36777899999999999999999999999999


Q ss_pred             cc
Q psy14961        293 SK  294 (320)
Q Consensus       293 ~~  294 (320)
                      ..
T Consensus       320 ~~  321 (329)
T 3fvz_A          320 LT  321 (329)
T ss_dssp             EE
T ss_pred             CC
Confidence            64

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.78  E-value=3.4e-16  Score=136.13  Aligned_cols=230  Identities=15%  Similarity=0.137  Sum_probs=143.5

Q ss_pred             CeEeecccce--eEEEEEeCccceEEEEEcCCCCEEEEec-CCCeEEEEEecccCCcccccccccc---------cccCe
Q psy14961          1 MIIWDGLTQT--KEHSVTMPATWVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVAT---------HTSFI   68 (320)
Q Consensus         1 ~~~W~~~~~~--~~~~~~~~~~~V~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~---------h~~~v   68 (320)
                      |.+||+.+++  .+.....+...+..++|+|+|++|++++ .++.+.+|++...... .....+..         +...+
T Consensus        65 v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~-~~~~~~~~~~~~p~~~~~~~~~  143 (347)
T 3hfq_A           65 IAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL-TLTDTVQHSGHGPRPEQDGSHI  143 (347)
T ss_dssp             EEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE-EEEEEEECCCCCSSTTCSSCCE
T ss_pred             EEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe-eecceeecCCCCCCccccCCCc
Confidence            4688886655  3333333556778999999999888887 6799999998532221 11111111         12347


Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECC-Ccceee--ecccC-ccceeEEEEeeCCCCCEEEE-EeCCCeEEEEeCCC--C
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVE-SSQLLQ--SFHGH-TGELMDLDLAPSETGNTFVS-GSSDKLVNIWDMRT--G  141 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~--~~~~~-~~~v~~~~~~~~~~~~~l~s-~~~dg~i~lwd~~~--~  141 (320)
                      .++.|+++++.+++...++.|++|++. ++++..  .+..+ ......++|  +++|+++++ ...++.+.+|++..  +
T Consensus       144 ~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~--spdg~~l~v~~~~~~~v~v~~~~~~~g  221 (347)
T 3hfq_A          144 HYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF--SPDGQYAFLAGELSSQIASLKYDTQTG  221 (347)
T ss_dssp             EEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred             eEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE--CCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence            789999999955555568899999998 444321  12222 224455555  567886665 56678999998763  3


Q ss_pred             cEEE--EeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCC---eeEeE
Q psy14961        142 YCVQ--SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRAD---KEVAC  215 (320)
Q Consensus       142 ~~~~--~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~---~~~~~  215 (320)
                      ....  .+....               .+     + .....+..++|+|+|++| ++...++.|.+|++...   +.+..
T Consensus       222 ~~~~~~~~~~~~---------------~~-----~-~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~  280 (347)
T 3hfq_A          222 AFTQLGIVKTIP---------------AD-----Y-TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ  280 (347)
T ss_dssp             EEEEEEEEESSC---------------TT-----C-CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             ceEEeeeeeecC---------------CC-----C-CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence            2110  100000               00     0 011357889999999987 55667899999998733   22222


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeC-CCeEEEE--cCCCCeE
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYN-DYTINVW--DSLKCCR  256 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~v~~w--d~~~~~~  256 (320)
                      .....  ..+..++|+|+|++|++++. ++.|.+|  |..++..
T Consensus       281 ~~~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l  322 (347)
T 3hfq_A          281 ISTEG--DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL  322 (347)
T ss_dssp             EECSS--SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             EecCC--CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence            22211  12467899999999888875 4899999  5555443

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.77  E-value=2.4e-16  Score=138.21  Aligned_cols=245  Identities=13%  Similarity=0.074  Sum_probs=167.6

Q ss_pred             CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEEEEECCCcceeeecccC--
Q psy14961         39 LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCALWDVESSQLLQSFHGH--  106 (320)
Q Consensus        39 ~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~--  106 (320)
                      .|+.|.+||....    .....+..+..+  .+.++++++++++++          .++.|.+||+.+.+.+..+...  
T Consensus        29 ~d~~v~v~D~~t~----~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~  102 (361)
T 2oiz_A           29 TESRVHVYDYTNG----KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK  102 (361)
T ss_dssp             GGCEEEEEETTTC----CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred             ccCeEEEEECCCC----eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence            4789999986422    222334444444  789999999999886          3678999999988887766532  


Q ss_pred             ----ccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEE-eccCC--------------ccccCCCeEEEEEC
Q psy14961        107 ----TGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQS-FEGHH--------------NLITDDKLVNIWDM  165 (320)
Q Consensus       107 ----~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~-~~~~~--------------~~~~~d~~i~iwd~  165 (320)
                          ......+++  +++|++|++++.  ++.|.+||+.+++.+.. +....              ...+.|+.+.+++.
T Consensus       103 ~~~~g~~p~~i~~--spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~  180 (361)
T 2oiz_A          103 RVQGLNYDGLFRQ--TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINL  180 (361)
T ss_dssp             BCCBCCCGGGEEE--CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred             ccccCCCcceEEE--CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence                123344555  667999998874  57899999999988776 43211              12346778888887


Q ss_pred             cC-Ceeee------eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE--eEEecCc--------ceeeeEEE
Q psy14961        166 RT-GYCVQ------SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV--ACYKKDS--------ILFGATSV  228 (320)
Q Consensus       166 ~~-~~~~~------~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~--------~~~~~~~~  228 (320)
                      .. ++...      .+..+..++ .+.++|++..++..+.++.+.++|+......  ..+....        ...+...+
T Consensus       181 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~  259 (361)
T 2oiz_A          181 GEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV  259 (361)
T ss_dssp             CTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred             CCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence            54 44331      122222222 2344677878877888999999998754322  1111100        01111236


Q ss_pred             EEecCCcEEEEEeC-----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        229 DFSVSGRLLFAGYN-----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       229 ~~s~~~~~l~~g~~-----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +|+|+++.++++..           .++|.+||..+.+.+.++..+.  +.+|+|+|||++|++++. ++|.+||.+.
T Consensus       260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t  334 (361)
T 2oiz_A          260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ  334 (361)
T ss_dssp             EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred             EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence            89999888877653           3589999999999999888777  999999999999999887 9999999654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.76  E-value=9.7e-17  Score=141.66  Aligned_cols=279  Identities=10%  Similarity=-0.027  Sum_probs=170.0

Q ss_pred             eecccceeEEEEEeCcc-----ceEEEEEcCCCCEEEEecCC-C--eEEEEEecccCCcccccccccccc-cCeEEEEec
Q psy14961          4 WDGLTQTKEHSVTMPAT-----WVMACAYAPSGSVVASGGLD-N--KVTVYAIALEDDSSAKKKTVATHT-SFISCCIFP   74 (320)
Q Consensus         4 W~~~~~~~~~~~~~~~~-----~V~~~~~~~~~~~l~s~~~d-g--~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~   74 (320)
                      .|..++.....+..+..     ++..++|+|||++|+.+... +  .|.+|++...  .   ...+..+. .......|+
T Consensus        15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~---~~~l~~~~~~~~~~~~~s   89 (396)
T 3c5m_A           15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--Q---AVQLTEGKGDNTFGGFIS   89 (396)
T ss_dssp             ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT--E---EEECCCSSCBCTTTCEEC
T ss_pred             ecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCC--c---EEEeecCCCCccccceEC
Confidence            36677766655543322     36778999999998776443 3  5666665321  1   11222222 222336789


Q ss_pred             CCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeE---EE--------------EeeCCCCCEEEEE-----eCCCe
Q psy14961         75 NSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMD---LD--------------LAPSETGNTFVSG-----SSDKL  132 (320)
Q Consensus        75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~---~~--------------~~~~~~~~~l~s~-----~~dg~  132 (320)
                      ++++.|+.++.++.+.+||+.+++.......+......   +.              ...+++++.++.+     ..+..
T Consensus        90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~  169 (396)
T 3c5m_A           90 TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR  169 (396)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred             CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence            99999999999999999999887765444433321111   11              1234555555443     35668


Q ss_pred             EEEEeCCCCcEEEEe-----------cc-CCc-c--ccC--C----CeEEEEECcCCeeeeeecCC-CCCeEEEEEcCCC
Q psy14961        133 VNIWDMRTGYCVQSF-----------EG-HHN-L--ITD--D----KLVNIWDMRTGYCVQSFEGH-QSDVNSVKFHPSG  190 (320)
Q Consensus       133 i~lwd~~~~~~~~~~-----------~~-~~~-~--~~~--d----~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~p~g  190 (320)
                      |.+||+.+++.....           .+ ... +  +..  .    ..|.+||+..+......... ...+..++|+|+|
T Consensus       170 l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg  249 (396)
T 3c5m_A          170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG  249 (396)
T ss_dssp             EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTS
T ss_pred             EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCC
Confidence            999999887643322           11 111 1  111  1    35777777655433222211 2357889999999


Q ss_pred             CEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEec-CCcEEEEEe----------------CCCeEEE
Q psy14961        191 DAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSV-SGRLLFAGY----------------NDYTINV  248 (320)
Q Consensus       191 ~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~----------------~dg~v~~  248 (320)
                      ++|+.++.+     +.|.+||+.+++.........    .. ..|+| +|+++++++                .+..|.+
T Consensus       250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~  324 (396)
T 3c5m_A          250 SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV  324 (396)
T ss_dssp             SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred             CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence            987766543     459999998776543322221    12 78999 999888764                3478999


Q ss_pred             EcCCCCeEEEEeecCCC-----------ceeEEEECcCCCeEEEecC-CCceEeeec
Q psy14961        249 WDSLKCCRVNHLMGHEN-----------RVSCLQVSPDGTAFSSGSW-DTTLRDEES  293 (320)
Q Consensus       249 wd~~~~~~~~~~~~h~~-----------~i~~i~~s~~~~~l~s~s~-D~~ir~~~~  293 (320)
                      ||...+.. ..+..|..           .+..++|+|||+.|+.++. ++...+|..
T Consensus       325 ~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~  380 (396)
T 3c5m_A          325 LNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA  380 (396)
T ss_dssp             EETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             EecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence            99876653 33455544           2567899999998877764 566666653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.76  E-value=2.2e-17  Score=158.19  Aligned_cols=242  Identities=11%  Similarity=0.082  Sum_probs=156.0

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc-----CeEEEEecCCCCEEEEEeCC---------C
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS-----FISCCIFPNSDQQILTGSGD---------C   87 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~d---------g   87 (320)
                      ..++.|+|||++|+++  |+.|++|++.....    ...+..|..     ......|+|+++.|+.++.+         +
T Consensus        19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNS----SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCEEECSSSEEEEEE--TTEEEEEETTTCCE----EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             ccccEECCCCcEEEEc--CCcEEEEECCCCce----EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            4578999999998886  89999999854321    122333322     22347889999999998876         5


Q ss_pred             eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-eccCCccccCCCeEEEEECc
Q psy14961         88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEGHHNLITDDKLVNIWDMR  166 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~~~~~~~d~~i~iwd~~  166 (320)
                      .+.+||+.+++.. .+..+.+.+...+|  +|||+.|+.+. |+.|.+||+.++...+. ..++..              
T Consensus        93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~--SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~--------------  154 (740)
T 4a5s_A           93 SYDIYDLNKRQLI-TEERIPNNTQWVTW--SPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKED--------------  154 (740)
T ss_dssp             EEEEEETTTTEEC-CSSCCCTTEEEEEE--CSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTT--------------
T ss_pred             EEEEEECCCCcEE-EcccCCCcceeeEE--CCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCcc--------------
Confidence            6679999988764 35556677777766  56799998884 68999999987764321 111110              


Q ss_pred             CCeeeeeecCCC---------CCeEEEEEcCCCCEEEEeeCCC------------------------------------e
Q psy14961        167 TGYCVQSFEGHQ---------SDVNSVKFHPSGDAVATGSDDA------------------------------------T  201 (320)
Q Consensus       167 ~~~~~~~~~~~~---------~~v~~v~~~p~g~~l~s~s~dg------------------------------------~  201 (320)
                           ..+.++.         .....++|||||++||.++.|.                                    +
T Consensus       155 -----~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~  229 (740)
T 4a5s_A          155 -----IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK  229 (740)
T ss_dssp             -----TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred             -----ceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence                 0111121         1223578889888887764221                                    5


Q ss_pred             EEEEECCC---C---eeEeEEecC----cceeeeEEEEEecCCcEEEEEeC----CCeEEEEcCCCCe----E--EEEe-
Q psy14961        202 CRLFDLRA---D---KEVACYKKD----SILFGATSVDFSVSGRLLFAGYN----DYTINVWDSLKCC----R--VNHL-  260 (320)
Q Consensus       202 i~iwd~~~---~---~~~~~~~~~----~~~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd~~~~~----~--~~~~-  260 (320)
                      |.+||+.+   +   +... ....    .....+..++|+|||+.++....    +..|.+||..++.    .  +..+ 
T Consensus       230 l~v~d~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~  308 (740)
T 4a5s_A          230 FFVVNTDSLSSVTNATSIQ-ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI  308 (740)
T ss_dssp             EEEEETTSCCSSSCCCEEE-ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred             EEEEECCCCCCCCcceEEE-ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence            78889887   6   2222 2110    01123568899999997766543    3479999977654    1  2223 


Q ss_pred             -ecCCCcee-----EEEECcCCCeEE-Eec-CCC--ceEeeec
Q psy14961        261 -MGHENRVS-----CLQVSPDGTAFS-SGS-WDT--TLRDEES  293 (320)
Q Consensus       261 -~~h~~~i~-----~i~~s~~~~~l~-s~s-~D~--~ir~~~~  293 (320)
                       .+|...|.     .++|+|||+.|+ ..| .+|  .|.+|+.
T Consensus       309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~  351 (740)
T 4a5s_A          309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI  351 (740)
T ss_dssp             EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred             eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence             56776665     789999999877 665 344  4666664

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.72  E-value=1.8e-14  Score=122.42  Aligned_cols=252  Identities=12%  Similarity=0.090  Sum_probs=158.6

Q ss_pred             EEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         15 VTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      +........+++|+|+|+ +++++..++.|..|+....      ...+..+...+.++.+.+++..+++...++.|.+||
T Consensus        23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d   96 (296)
T 3e5z_A           23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ------LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR   96 (296)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC------EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC------eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence            344456677899999998 7788888999999987432      223444566788999999888777766678999999


Q ss_pred             CCCcceeeecccCc----cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961         94 VESSQLLQSFHGHT----GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY  169 (320)
Q Consensus        94 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~  169 (320)
                      ..+++.........    ..+..+++  +++|+++++.+..|....++....          ..-...+.|..++.. +.
T Consensus        97 ~~~g~~~~~~~~~~~~~~~~~~~i~~--d~~G~l~vtd~~~g~~~~~~~~~~----------~~~~~~~~l~~~~~~-g~  163 (296)
T 3e5z_A           97 EPGGEWESIADSFEGKKLNSPNDVCL--APDGSLWFSDPTYGIDKPEEGYGG----------EMELPGRWVFRLAPD-GT  163 (296)
T ss_dssp             STTCCEEEEECEETTEECCCCCCEEE--CTTSCEEEEECSHHHHCGGGSSCC----------CCCSSSCEEEEECTT-SC
T ss_pred             CCCCcEEEEeeccCCCCCCCCCCEEE--CCCCCEEEECCccccccccccccc----------cccCCCcEEEEECCC-CC
Confidence            97776543222111    12334544  556777766321111000000000          000001122222222 11


Q ss_pred             eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC-CCee---EeEEecCcceeeeEEEEEecCCcEEEEEeCCCe
Q psy14961        170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR-ADKE---VACYKKDSILFGATSVDFSVSGRLLFAGYNDYT  245 (320)
Q Consensus       170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~  245 (320)
                       ...+..+....+.++|+|+|+.+++.+.++.|.+|++. .++.   ...+ .. ....+..++++++|.++++.  ++.
T Consensus       164 -~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-~~~~p~~i~~d~~G~l~v~~--~~~  238 (296)
T 3e5z_A          164 -LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV-EPGKTDGLRVDAGGLIWASA--GDG  238 (296)
T ss_dssp             -EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC-SSSCCCSEEEBTTSCEEEEE--TTE
T ss_pred             -EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC-CCCCCCeEEECCCCCEEEEc--CCe
Confidence             12223344567899999999988878888999999986 3332   1222 11 11123568899999977666  788


Q ss_pred             EEEEcCCCCeEEEEeecCCCceeEEEE-CcCCCeEEEecCCCceEeee
Q psy14961        246 INVWDSLKCCRVNHLMGHENRVSCLQV-SPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       246 v~~wd~~~~~~~~~~~~h~~~i~~i~~-s~~~~~l~s~s~D~~ir~~~  292 (320)
                      |.+||.. +..+..+..+.. +++++| +|+++.|.+++.++..|+-.
T Consensus       239 v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~  284 (296)
T 3e5z_A          239 VHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET  284 (296)
T ss_dssp             EEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred             EEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence            9999976 666667777777 999999 68999999888887666544

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.72  E-value=4.7e-15  Score=130.08  Aligned_cols=227  Identities=10%  Similarity=0.072  Sum_probs=139.4

Q ss_pred             CeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeCCCeEEEEECC-CcceeeecccC-ccceeEEEEee
Q psy14961         41 NKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSGDCTCALWDVE-SSQLLQSFHGH-TGELMDLDLAP  117 (320)
Q Consensus        41 g~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~  117 (320)
                      +.|.+|+++............. .....+..+.+++++++|++++.+ .|.+|++. ++++....... .+....+  ..
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~--~~   90 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRAN--DA   90 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGG--CT
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccE--EE
Confidence            5688887753222111111111 122356778999999999999888 99999987 66654322211 1223333  34


Q ss_pred             CCCCCE--EEEEe-------------CCCeEEEEeCC-CCcEEEEeccCCccccCCCeEEEEECcCCeeeeee-cCCCCC
Q psy14961        118 SETGNT--FVSGS-------------SDKLVNIWDMR-TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF-EGHQSD  180 (320)
Q Consensus       118 ~~~~~~--l~s~~-------------~dg~i~lwd~~-~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~  180 (320)
                      +++|+.  +++++             .++.+.+|++. .+.....+                        ..+ ..+...
T Consensus        91 spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~------------------------~~~~~~~~~~  146 (365)
T 1jof_A           91 DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV------------------------QNYEYQENTG  146 (365)
T ss_dssp             TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE------------------------EEEECCTTCC
T ss_pred             CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE------------------------eeEEeCCCCc
Confidence            667874  44543             56677777764 23221111                        001 024456


Q ss_pred             eEEEEEcCCCCEEEEee-CCCeEEEEECC-CCeeEe--EEecCcceeeeEEEEEecCCcEEEEEeC-CCeEEEEcCC--C
Q psy14961        181 VNSVKFHPSGDAVATGS-DDATCRLFDLR-ADKEVA--CYKKDSILFGATSVDFSVSGRLLFAGYN-DYTINVWDSL--K  253 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s-~dg~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~v~~wd~~--~  253 (320)
                      +.+++|+|+|++++++. .++.|.+||+. +++...  ..........+..++|+|+|++|+++.+ ++.|.+|+..  +
T Consensus       147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~  226 (365)
T 1jof_A          147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence            88999999999887765 46899999998 565422  1211110124578899999999988775 6899998643  3


Q ss_pred             CeEE---EEee-------cCCC------ceeEEE-ECcCCCeEEEecCCC------ceEeeecc
Q psy14961        254 CCRV---NHLM-------GHEN------RVSCLQ-VSPDGTAFSSGSWDT------TLRDEESK  294 (320)
Q Consensus       254 ~~~~---~~~~-------~h~~------~i~~i~-~s~~~~~l~s~s~D~------~ir~~~~~  294 (320)
                      +...   ..+.       +|..      .+..++ |+|||++|++++.+.      +|++|+..
T Consensus       227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~  290 (365)
T 1jof_A          227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR  290 (365)
T ss_dssp             CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred             CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence            4321   1121       2222      588999 999999988776433      89999874

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.71  E-value=6.8e-16  Score=145.81  Aligned_cols=260  Identities=11%  Similarity=0.030  Sum_probs=159.4

Q ss_pred             eEeecccceeEEEEEeCccceE---------EEEEc--CCCCE-EEEecC-CCeEEEEEecccCCcccccccccc-----
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVM---------ACAYA--PSGSV-VASGGL-DNKVTVYAIALEDDSSAKKKTVAT-----   63 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~---------~~~~~--~~~~~-l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~-----   63 (320)
                      .||....+.....+..+...|.         +..|+  |||+. |+.++. +..|.+++++....  .....+..     
T Consensus        50 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~--~~~~~l~~~~~~~  127 (662)
T 3azo_A           50 TLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG--AVPRPLTPVSAVG  127 (662)
T ss_dssp             EEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC--CCCEECSCCCCST
T ss_pred             EEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC--CCCEeccCCccCC
Confidence            3676443333334444444444         45555  99998 776553 44454444320010  11122333     


Q ss_pred             cccCeEEEEecCCCCEEEEEeCC----------CeEEEEECCC------cceeeecc-cCccceeEEEEeeCCCCCEEEE
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGD----------CTCALWDVES------SQLLQSFH-GHTGELMDLDLAPSETGNTFVS  126 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s  126 (320)
                      |...+..+.|+++++.|++++.|          ..|.+||+.+      +... .+. .+...+..+.+  +|||+.|+.
T Consensus       128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~--SpDG~~la~  204 (662)
T 3azo_A          128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRL--SPDGRQAVW  204 (662)
T ss_dssp             TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEE--CTTSSEEEE
T ss_pred             CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceE--CCCCCEEEE
Confidence            56677889999999999988876          5899999987      5543 333 34455555555  668999988


Q ss_pred             EeCCC--------eEEEEeCC-CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee
Q psy14961        127 GSSDK--------LVNIWDMR-TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS  197 (320)
Q Consensus       127 ~~~dg--------~i~lwd~~-~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s  197 (320)
                      ++.++        .|.+||+. ++...                        .......+|...+..++|+|+|++++++.
T Consensus       205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~------------------------~~~~l~~~~~~~~~~~~~spdg~l~~~~~  260 (662)
T 3azo_A          205 LAWDHPRMPWEGTELKTARVTEDGRFA------------------------DTRTLLGGPEEAIAQAEWAPDGSLIVATD  260 (662)
T ss_dssp             EEECTTCCTTTCEEEEEEEECTTSCEE------------------------EEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred             EECCCCCCCCCCcEEEEEEECCCCccc------------------------ccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence            77553        45555544 22100                        22222334566789999999999778888


Q ss_pred             CCC--eEEEEECCCCeeEeEEecCcce------eeeEEEEEecCCcEEEEEeCCCeEEEE--cCCCCeEEEEeecCCCce
Q psy14961        198 DDA--TCRLFDLRADKEVACYKKDSIL------FGATSVDFSVSGRLLFAGYNDYTINVW--DSLKCCRVNHLMGHENRV  267 (320)
Q Consensus       198 ~dg--~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l~~g~~dg~v~~w--d~~~~~~~~~~~~h~~~i  267 (320)
                      .++  .|.+||+.+++.......+...      .+...++|+|++.+++++.. +.++||  |...+. +..+..|...+
T Consensus       261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~  338 (662)
T 3azo_A          261 RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEW  338 (662)
T ss_dssp             TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEE
T ss_pred             CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeE
Confidence            888  5666676555543222221111      11346889999999999998 999999  655444 56677788888


Q ss_pred             eEE-EECcCCCeEEEecCCCceEeee
Q psy14961        268 SCL-QVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       268 ~~i-~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ..+ +++++.-++++++.+....+|.
T Consensus       339 ~~~~s~~~~~~~~~~~~~~~~~~i~~  364 (662)
T 3azo_A          339 AATLTVSGTRAVGVAASPRTAYEVVE  364 (662)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred             EEEEecCCCEEEEEEcCCCCCCEEEE
Confidence            877 5554444566666666555554

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.71  E-value=1.5e-15  Score=145.39  Aligned_cols=274  Identities=7%  Similarity=-0.025  Sum_probs=165.7

Q ss_pred             CeEeecccceeEEEEEeCccc---e--EEEEEcCCCCEEEEecCC---------CeEEEEEecccCCccccccccccccc
Q psy14961          1 MIIWDGLTQTKEHSVTMPATW---V--MACAYAPSGSVVASGGLD---------NKVTVYAIALEDDSSAKKKTVATHTS   66 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~---V--~~~~~~~~~~~l~s~~~d---------g~i~v~~~~~~~~~~~~~~~~~~h~~   66 (320)
                      |++||..+++....+..+...   +  ...+|||||++|+.++.+         +.+.+||+...     ....+..|..
T Consensus        38 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~-----~~~~l~~~~~  112 (740)
T 4a5s_A           38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-----QLITEERIPN  112 (740)
T ss_dssp             EEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-----EECCSSCCCT
T ss_pred             EEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC-----cEEEcccCCC
Confidence            579999988865544444322   2  347889999999998876         56679987532     1234556677


Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee-cccCccce-----------------eEEEEeeCCCCCEEEEEe
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS-FHGHTGEL-----------------MDLDLAPSETGNTFVSGS  128 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v-----------------~~~~~~~~~~~~~l~s~~  128 (320)
                      .+....|+|+|+.|+.+. |+.|++|++.++...+. ..++...+                 ..+.|  +|||+.|+.++
T Consensus       113 ~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~w--SpDg~~la~~~  189 (740)
T 4a5s_A          113 NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWW--SPNGTFLAYAQ  189 (740)
T ss_dssp             TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEE--CTTSSEEEEEE
T ss_pred             cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEE--CCCCCEEEEEE
Confidence            899999999999998875 78999999988765432 12222111                 12444  67899999887


Q ss_pred             CCCe-EEEEeCCCC-------cEEEEecc-CCccccCCCeEEEEECcC---Ce--eeeeec------CCCCCeEEEEEcC
Q psy14961        129 SDKL-VNIWDMRTG-------YCVQSFEG-HHNLITDDKLVNIWDMRT---GY--CVQSFE------GHQSDVNSVKFHP  188 (320)
Q Consensus       129 ~dg~-i~lwd~~~~-------~~~~~~~~-~~~~~~~d~~i~iwd~~~---~~--~~~~~~------~~~~~v~~v~~~p  188 (320)
                      .|.. +++|++...       .....+.- ..........+++||+.+   +.  ....+.      +|...+..++|+|
T Consensus       190 ~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp  269 (740)
T 4a5s_A          190 FNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT  269 (740)
T ss_dssp             EECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred             EcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC
Confidence            6544 888875211       01111100 000011233688999988   73  222332      3777899999999


Q ss_pred             CCCEEEEee----CCCeEEEEECCCCe-------eEeEE-ecCcceee---eEEEEEecCCcEEE-EEeC-CC--eEEEE
Q psy14961        189 SGDAVATGS----DDATCRLFDLRADK-------EVACY-KKDSILFG---ATSVDFSVSGRLLF-AGYN-DY--TINVW  249 (320)
Q Consensus       189 ~g~~l~s~s----~dg~i~iwd~~~~~-------~~~~~-~~~~~~~~---~~~~~~s~~~~~l~-~g~~-dg--~v~~w  249 (320)
                      ||+.++...    .+..|.+||+.+++       ..... ..+..-..   .....|+|||+.|+ ..++ +|  .|.+|
T Consensus       270 dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~  349 (740)
T 4a5s_A          270 QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYF  349 (740)
T ss_dssp             TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred             CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEE
Confidence            999665543    23479999998876       11111 11111111   23567999999877 6653 34  57778


Q ss_pred             cCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecC
Q psy14961        250 DSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSW  284 (320)
Q Consensus       250 d~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~  284 (320)
                      |...+... .+....-.|..+.. +|++ ++++++.
T Consensus       350 ~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~  383 (740)
T 4a5s_A          350 QIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNE  383 (740)
T ss_dssp             ETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred             ECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEec
Confidence            87654433 34333445555442 3344 4445544

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.71  E-value=1.1e-13  Score=119.37  Aligned_cols=238  Identities=10%  Similarity=0.059  Sum_probs=152.0

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC----CeE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD----CTC   89 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~v   89 (320)
                      .+..+...+.+++|+++|++++++..++.|.+|+.....    .......+...+.++.+.+++..+++...+    +.|
T Consensus        39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i  114 (333)
T 2dg1_A           39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE----IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI  114 (333)
T ss_dssp             EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC----EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred             EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc----EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence            344455667899999999988888889999999764211    111112345678899999888877776666    689


Q ss_pred             EEEECCCcceeeecc--cCccceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEeccCCccccCCCeEE
Q psy14961         90 ALWDVESSQLLQSFH--GHTGELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVN  161 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~  161 (320)
                      .+||.+++.....+.  .+...+..+.+  +++|+.+++...      .+.|..+|..+++...                
T Consensus       115 ~~~d~~~~~~~~~~~~~~~~~~~~~i~~--d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~----------------  176 (333)
T 2dg1_A          115 FAATENGDNLQDIIEDLSTAYCIDDMVF--DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP----------------  176 (333)
T ss_dssp             EEECTTSCSCEEEECSSSSCCCEEEEEE--CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE----------------
T ss_pred             EEEeCCCCEEEEEEccCccCCcccceEE--CCCCCEEEEeccccccCCCceEEEEeCCCCEEEE----------------
Confidence            999988776542222  22344555655  556776665543      2344444443322110                


Q ss_pred             EEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC-CeeEeEEe-----cCcceeeeEEEEEecCC
Q psy14961        162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA-DKEVACYK-----KDSILFGATSVDFSVSG  234 (320)
Q Consensus       162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~-~~~~~~~~-----~~~~~~~~~~~~~s~~~  234 (320)
                                  +..+...+..++|+|+|+.+ ++.+.++.|.+||+.+ +.....+.     .......+..++++++|
T Consensus       177 ------------~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G  244 (333)
T 2dg1_A          177 ------------IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD  244 (333)
T ss_dssp             ------------EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred             ------------eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence                        00112246789999999866 4556688999999864 22221111     00001134678899999


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCC------ceeEEEECcCCCeEEEecCCC
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHEN------RVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~------~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      .++++...++.|.+||. .+..+..+..+..      .+.+++|+||++.|+.++.++
T Consensus       245 ~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          245 NLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             CEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             CEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence            98888878899999997 4555555544433      689999999987776665554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.69  E-value=3.1e-15  Score=131.81  Aligned_cols=221  Identities=14%  Similarity=0.023  Sum_probs=145.9

Q ss_pred             EEecCCCCEEEEEeC-CC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961         71 CIFPNSDQQILTGSG-DC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        71 ~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~  147 (320)
                      ..|+++++.|+.++. ++  .|.+||+.+++.......+...+....|  +|+|+.|+.++.++.|++||+.+++....+
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~--spdg~~l~~~~~~~~l~~~d~~~g~~~~~~  118 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL--SPDDDALFYVKDGRNLMRVDLATLEENVVY  118 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE--cCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence            678999999988887 66  4888899888877666655555444555  567999999999999999999988654332


Q ss_pred             ccCCc--------------c-------------------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        148 EGHHN--------------L-------------------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       148 ~~~~~--------------~-------------------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      ..+..              .                         ...+..|.+||+.+++... +..+...+..++|+|
T Consensus       119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp  197 (388)
T 3pe7_A          119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRP  197 (388)
T ss_dssp             ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEET
T ss_pred             echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECC
Confidence            21111              0                         0123578899998886443 334566789999999


Q ss_pred             -CCCEEEEeeCC------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC-CC----eEEEEcCCCCeE
Q psy14961        189 -SGDAVATGSDD------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-DY----TINVWDSLKCCR  256 (320)
Q Consensus       189 -~g~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg----~v~~wd~~~~~~  256 (320)
                       +|+.|+.++.+      ..|.++|+..++...... ......+....|+|||+.|+..+. ++    .|.+||+.++..
T Consensus       198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~  276 (388)
T 3pe7_A          198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT-HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN  276 (388)
T ss_dssp             TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC-CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred             CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee-CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence             99988877653      378888877654332222 211112456789999997765442 22    499999887653


Q ss_pred             --EEEeecCCCc---eeEEEECcCCCeEEEe---------cCCCceEeeecch
Q psy14961        257 --VNHLMGHENR---VSCLQVSPDGTAFSSG---------SWDTTLRDEESKN  295 (320)
Q Consensus       257 --~~~~~~h~~~---i~~i~~s~~~~~l~s~---------s~D~~ir~~~~~~  295 (320)
                        +..+.++...   ...++|+|||+.|+..         +.+..|++|+...
T Consensus       277 ~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~  329 (388)
T 3pe7_A          277 RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN  329 (388)
T ss_dssp             EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred             EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence              3333331110   1234799999988754         4567899999654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.68  E-value=5.6e-14  Score=117.51  Aligned_cols=240  Identities=11%  Similarity=0.027  Sum_probs=158.5

Q ss_pred             ceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961         21 WVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL   99 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~   99 (320)
                      ...+++++++|++.+ +...++.|.+|+......  .  .....+...+.++.+.+++..+++.. ++.|.+||..+...
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~--~--~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~   99 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT--T--VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ   99 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-------E--ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCccc--c--eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE
Confidence            567899999999777 557788999987532111  1  01112224566788888777555544 88999999876543


Q ss_pred             eeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961        100 LQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ  178 (320)
Q Consensus       100 ~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~  178 (320)
                      . .+. ........+++  +++|+.+++...++.|.+|+..+......                           .....
T Consensus       100 ~-~~~~~~~~~p~~i~~--~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---------------------------~~~~~  149 (270)
T 1rwi_B          100 T-VLPFDGLNYPEGLAV--DTQGAVYVADRGNNRVVKLAAGSKTQTVL---------------------------PFTGL  149 (270)
T ss_dssp             E-ECCCCSCSSEEEEEE--CTTCCEEEEEGGGTEEEEECTTCCSCEEC---------------------------CCCSC
T ss_pred             e-eeecCCcCCCcceEE--CCCCCEEEEECCCCEEEEEECCCceeEee---------------------------ccccC
Confidence            3 222 12244556655  45677777766778888886543221100                           01112


Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN  258 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~  258 (320)
                      ..+..++++|+|+.+++...++.|.+||.......... .. ....+..++++++|.++++...++.|..||........
T Consensus       150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~  227 (270)
T 1rwi_B          150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-FT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV  227 (270)
T ss_dssp             CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-CS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred             CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-cc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence            24567999999997777777889999998765433211 11 11235678999999877777778899999976544333


Q ss_pred             EeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHh
Q psy14961        259 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRY  297 (320)
Q Consensus       259 ~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~  297 (320)
                      ....+...+.+|+++|+|+++++.+.+++|++++..+..
T Consensus       228 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          228 LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence            222344678999999999999999999999999976653

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.67  E-value=8.3e-15  Score=138.38  Aligned_cols=244  Identities=6%  Similarity=-0.041  Sum_probs=152.5

Q ss_pred             eCccceEEEEEcCCCCEEEEe--cCCCeEEEEEecccCCcccccccccccccCeE---------EEEec--CCCCE-EEE
Q psy14961         17 MPATWVMACAYAPSGSVVASG--GLDNKVTVYAIALEDDSSAKKKTVATHTSFIS---------CCIFP--NSDQQ-ILT   82 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~--~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~s   82 (320)
                      .|...|..++|++++-++++.  +.++...+|......    ....+..|...+.         ...|+  |+++. |+.
T Consensus        21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~   96 (662)
T 3azo_A           21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG----AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF   96 (662)
T ss_dssp             HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS----CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred             hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC----CcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence            356788999999887677776  568889999863211    1223444443333         34343  88887 665


Q ss_pred             EeC-CCeEEEEECC--C-cceeeeccc-----CccceeEEEEeeCCCCCEEEEEeCC----------CeEEEEeCCCCcE
Q psy14961         83 GSG-DCTCALWDVE--S-SQLLQSFHG-----HTGELMDLDLAPSETGNTFVSGSSD----------KLVNIWDMRTGYC  143 (320)
Q Consensus        83 ~~~-dg~v~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~s~~~d----------g~i~lwd~~~~~~  143 (320)
                      ++. +..|.++++.  + +. ...+..     |...+..++|  +++|+.|++++.+          ..|.+||+.++..
T Consensus        97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~--spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  173 (662)
T 3azo_A           97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVL--LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA  173 (662)
T ss_dssp             EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEE--ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred             EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEE--CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence            543 5667777765  3 43 333433     4455666666  4578999988765          2444555443000


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCCEEEEeeCC--------CeEEEEECC-CC---
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGDAVATGSDD--------ATCRLFDLR-AD---  210 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~~l~s~s~d--------g~i~iwd~~-~~---  210 (320)
                                  .+         .+.. ..+. .+...+..++|+|||++|+.++.+        ..|.+||+. ++   
T Consensus       174 ------------~~---------~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~  231 (662)
T 3azo_A          174 ------------AD---------RSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA  231 (662)
T ss_dssp             ------------TC---------GGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE
T ss_pred             ------------cc---------CCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc
Confidence                        00         0222 2222 344567789999999999877754        379999998 45   


Q ss_pred             eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC--eEEEEcCCCCeEEEEeecCCCc--------eeEEEECcCCCeEE
Q psy14961        211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY--TINVWDSLKCCRVNHLMGHENR--------VSCLQVSPDGTAFS  280 (320)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--~v~~wd~~~~~~~~~~~~h~~~--------i~~i~~s~~~~~l~  280 (320)
                      +.......+.  .....+.|+|||++++++..++  .|.+||...+........+...        +..++|+|++++++
T Consensus       232 ~~~~l~~~~~--~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~  309 (662)
T 3azo_A          232 DTRTLLGGPE--EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV  309 (662)
T ss_dssp             EEEEEEEETT--BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred             ccEEeCCCCC--ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence            3322222211  1346788999999888888788  6666776555433222222222        56899999999999


Q ss_pred             EecCCCceEeee
Q psy14961        281 SGSWDTTLRDEE  292 (320)
Q Consensus       281 s~s~D~~ir~~~  292 (320)
                      +++. +++++|.
T Consensus       310 ~~~~-~~~~l~~  320 (662)
T 3azo_A          310 VHGK-GAAVLGI  320 (662)
T ss_dssp             EEBS-SSCEEEE
T ss_pred             EEEc-CccEEEE
Confidence            9999 9999994

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.66  E-value=7.4e-14  Score=121.15  Aligned_cols=237  Identities=12%  Similarity=0.140  Sum_probs=146.0

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      .+||..+++.. .+    ..+..++|+|||+.|+.++.+   +...+|.++.....   ...+..+.. +..+.|+++++
T Consensus        46 ~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~---~~~l~~~~~-~~~~~wspdg~  116 (347)
T 2gop_A           46 VIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS---SKKILEAKN-IRSLEWNEDSR  116 (347)
T ss_dssp             EEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE---EEEEEEESE-EEEEEECTTSS
T ss_pred             EEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc---eEEEEcCCC-ccceeECCCCC
Confidence            46676655432 22    457789999999999987654   45444443322211   112222333 88899999999


Q ss_pred             EEEEEeCC---------------------------CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC
Q psy14961         79 QILTGSGD---------------------------CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK  131 (320)
Q Consensus        79 ~l~s~~~d---------------------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg  131 (320)
                      .|+.++.+                           ..|.+||+.+++.+..+.. . .+..+.++  ++| .+++++.++
T Consensus       117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~s--pdg-~~~~~~~~~  191 (347)
T 2gop_A          117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWH--RDK-IVVNVPHRE  191 (347)
T ss_dssp             EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEE--TTE-EEEEEECCC
T ss_pred             EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCC--CCe-EEEEEeccc
Confidence            88877632                           5788999988776344443 3 56666665  467 666665542


Q ss_pred             -------eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC-----
Q psy14961        132 -------LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD-----  199 (320)
Q Consensus       132 -------~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d-----  199 (320)
                             ...+|                         ++|  +++.. .+..+ ..+..+  +|+|++|+.++.+     
T Consensus       192 ~~~~~~~~~~l~-------------------------~~d--~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~  240 (347)
T 2gop_A          192 IIPQYFKFWDIY-------------------------IWE--DGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYM  240 (347)
T ss_dssp             SSCCSSCCEEEE-------------------------EEE--TTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCC
T ss_pred             ccccccccccEE-------------------------EeC--CCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCc
Confidence                   12222                         222  22211 11112 344444  9999988777644     


Q ss_pred             ---CeEEEEECCCCeeEeEEecCcceeeeEE-EEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcC
Q psy14961        200 ---ATCRLFDLRADKEVACYKKDSILFGATS-VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       200 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~  275 (320)
                         ..|.+||  +++.........  ..+.. +.|+ ++ ++++++.++.+++| +.++.. ..+..+...|.+++|+| 
T Consensus       241 ~~~~~l~~~d--~~~~~~l~~~~~--~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~-  311 (347)
T 2gop_A          241 SEHNKLYIYD--GKEVMGILDEVD--RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE-  311 (347)
T ss_dssp             CSSCEEEEEC--SSCEEESSTTCC--SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS-
T ss_pred             cccceEEEEC--CCceEeccccCC--cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC-
Confidence               3688888  443322222211  22344 7888 88 88999999999999 764433 44566678899999999 


Q ss_pred             CCeEEEecCCCce-Eeeec
Q psy14961        276 GTAFSSGSWDTTL-RDEES  293 (320)
Q Consensus       276 ~~~l~s~s~D~~i-r~~~~  293 (320)
                       .++++++.+++. ++|..
T Consensus       312 -~~~~~~~~~~~~~~l~~~  329 (347)
T 2gop_A          312 -IVVYLKETATRLRELFTW  329 (347)
T ss_dssp             -SEEEEEECSSSCCEEEEE
T ss_pred             -cEEEEEcCCCChHHheEe
Confidence             677777776664 77765

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.66  E-value=1.1e-13  Score=131.83  Aligned_cols=244  Identities=11%  Similarity=0.020  Sum_probs=153.2

Q ss_pred             ceEEEEEcCCCCEEEEecCCC-----eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe-------
Q psy14961         21 WVMACAYAPSGSVVASGGLDN-----KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT-------   88 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg-----~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~-------   88 (320)
                      .+.+++|||||++|+.+..++     .|++||+.....   ....+ .+ ..+..+.|+++++.|+.++.++.       
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~---~~~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~  200 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE---LPDVL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE---EEEEE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---Ccccc-cC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence            577899999999998775533     899998853211   11111 11 22567889999999998887766       


Q ss_pred             ---------EEEEECCCcce----eeecccCccceeEEEEeeCCCCCEEEEEeC-----CCeEEEEeCCCCcEEEEeccC
Q psy14961         89 ---------CALWDVESSQL----LQSFHGHTGELMDLDLAPSETGNTFVSGSS-----DKLVNIWDMRTGYCVQSFEGH  150 (320)
Q Consensus        89 ---------v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-----dg~i~lwd~~~~~~~~~~~~~  150 (320)
                               |++|++.+++.    +.....+...+..+.+  +++|++|+.++.     +..|.+||+.+...       
T Consensus       201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~--SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~-------  271 (710)
T 2xdw_A          201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL--SDDGRYVLLSIREGCDPVNRLWYCDLQQESN-------  271 (710)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE--CTTSCEEEEEEECSSSSCCEEEEEEGGGSSS-------
T ss_pred             ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE--cCCCCEEEEEEEccCCCccEEEEEECccccc-------
Confidence                     99999987652    2222223333444544  667888887654     34566666543000       


Q ss_pred             CccccCCCeEEEEECcCCe-eeeeecCCCCCeEEEEEcCCCCEEEEeeC----CCeEEEEECCCCee---EeEEecCcce
Q psy14961        151 HNLITDDKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDAVATGSD----DATCRLFDLRADKE---VACYKKDSIL  222 (320)
Q Consensus       151 ~~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p~g~~l~s~s~----dg~i~iwd~~~~~~---~~~~~~~~~~  222 (320)
                        .+            .+. ....+..+...+.. .|+|+|+.|+..+.    ++.|.+||+.++..   ........ .
T Consensus       272 --~~------------~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~  335 (710)
T 2xdw_A          272 --GI------------TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-K  335 (710)
T ss_dssp             --SS------------CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-S
T ss_pred             --cc------------CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-C
Confidence              00            011 12223334444443 48889988766554    34699999987631   12222211 1


Q ss_pred             eeeEEEEEecCCcEEEEEeCCCe--EEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEE----EecCCCceEeeecc
Q psy14961        223 FGATSVDFSVSGRLLFAGYNDYT--INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFS----SGSWDTTLRDEESK  294 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~~dg~--v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~----s~s~D~~ir~~~~~  294 (320)
                      ..+..+.|++++.++++...++.  |.+||..++..+..+..+.+.|..++++|+++.|+    +....+++..|+..
T Consensus       336 ~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~  413 (710)
T 2xdw_A          336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT  413 (710)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred             CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence            12456788888888888888885  55567656666666777778899999999987655    33356788888854

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.64  E-value=1e-11  Score=104.96  Aligned_cols=260  Identities=7%  Similarity=0.001  Sum_probs=168.1

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      +...+.+++++++|++.++...++.|.+|+.. ..  .. ......+...+..+.+.+++..+++...++.|..||.+ +
T Consensus        13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~--~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g   87 (299)
T 2z2n_A           13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GK--IT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G   87 (299)
T ss_dssp             SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC--EE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC--eE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence            44678999999999988877778899999764 11  11 11112234567888888888777776668899999976 3


Q ss_pred             ce-eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-ecc------------CCc-ccc--CCCeE
Q psy14961         98 QL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEG------------HHN-LIT--DDKLV  160 (320)
Q Consensus        98 ~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~------------~~~-~~~--~d~~i  160 (320)
                      +. ...+......+..+.+  +++|..+++...++.|.+||. ++..... ...            ... .+.  ..+.|
T Consensus        88 ~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i  164 (299)
T 2z2n_A           88 IIKEYTLPNPDSAPYGITE--GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI  164 (299)
T ss_dssp             CEEEEECSSTTCCEEEEEE--CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred             cEEEEeCCCcCCCceeeEE--CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence            32 1222223344555555  556777777777889999998 4443221 111            000 111  24567


Q ss_pred             EEEECcCCeeeee-ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEE
Q psy14961        161 NIWDMRTGYCVQS-FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       161 ~iwd~~~~~~~~~-~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  239 (320)
                      ..||. +++.... ...+...+.+++++++|..+++...++.|..||. +++.. .+........+..+.++++|.++++
T Consensus       165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~  241 (299)
T 2z2n_A          165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAGIDLWFT  241 (299)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECSTTCEEEE
T ss_pred             EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCCCCEEEe
Confidence            77777 5543322 3334456889999999997777777889999998 55432 2322212224568889999997776


Q ss_pred             EeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        240 GYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      ...++.|..||.. +.... .+..+...+.++++ ++|++.++.+.++.+++
T Consensus       242 ~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~  291 (299)
T 2z2n_A          242 EWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKL  291 (299)
T ss_dssp             ETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred             ccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEE
Confidence            6678899999973 43222 12345567999999 99998887765555554

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.63  E-value=8.5e-14  Score=122.69  Aligned_cols=222  Identities=13%  Similarity=0.014  Sum_probs=145.2

Q ss_pred             CeEEEEecCCCCEEEEEeCC---CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         67 FISCCIFPNSDQQILTGSGD---CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      .+..+.|+++++.|+.....   ..|.+||+.+++.......+........|  +++|+.|+.++.++.|.+||+.+++.
T Consensus        37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~--spdg~~l~~~~~~~~l~~~d~~~~~~  114 (396)
T 3c5m_A           37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI--STDERAFFYVKNELNLMKVDLETLEE  114 (396)
T ss_dssp             CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE--CTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred             eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE--CCCCCEEEEEEcCCcEEEEECCCCCc
Confidence            35667899999988776543   47888899887754433322222222444  56799999999999999999988765


Q ss_pred             EEEeccCCcc------------------------c---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEE
Q psy14961        144 VQSFEGHHNL------------------------I---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSV  184 (320)
Q Consensus       144 ~~~~~~~~~~------------------------~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v  184 (320)
                      ......+...                        .               ..+..|.+||+.+++..... .+...+..+
T Consensus       115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~  193 (396)
T 3c5m_A          115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHP  193 (396)
T ss_dssp             EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEE
T ss_pred             EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccc
Confidence            4333211100                        0               23457889999887655443 456678999


Q ss_pred             EEcC-CCCEEEEeeCC------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCC
Q psy14961        185 KFHP-SGDAVATGSDD------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSL  252 (320)
Q Consensus       185 ~~~p-~g~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~  252 (320)
                      .|+| ++..|+.++.+      ..|.+||+..++...... ......+..+.|+|+|++|+.++.+     +.|.+||..
T Consensus       194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  272 (396)
T 3c5m_A          194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE  272 (396)
T ss_dssp             EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred             eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence            9999 78877666543      468888987654322222 1112235678999999988776543     459999987


Q ss_pred             CCeEEEEeecCCCceeEEEECc-CCCeEEEec----------------CCCceEeeecch
Q psy14961        253 KCCRVNHLMGHENRVSCLQVSP-DGTAFSSGS----------------WDTTLRDEESKN  295 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s----------------~D~~ir~~~~~~  295 (320)
                      ++.... +.... ... ++|+| ||++|+.++                .+..|.+|+...
T Consensus       273 ~g~~~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~  329 (396)
T 3c5m_A          273 TLENEE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA  329 (396)
T ss_dssp             TCCEEE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred             CCCeEE-eeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence            764432 22122 233 89999 999988765                347788998643

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.63  E-value=1.1e-13  Score=119.55  Aligned_cols=239  Identities=9%  Similarity=0.029  Sum_probs=159.1

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      +...|.++.|++++..++..+.++.++.|.-       .....+..+...+.++.|.++++.++++..++.|.+||.+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~   76 (333)
T 2dg1_A            4 SQQDLPTLFYSGKSNSAVPIISESELQTITA-------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK   76 (333)
T ss_dssp             --CCCCBCCSCGGGGCSSCCCCGGGSCEEEC-------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred             cccccceeeecCCccceeEEeecccCccccc-------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC
Confidence            3445778889999888887778888888832       112234445556788899988887778888999999999887


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCC----CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      +.......+...+.++++  +++|+++++...+    +.|.+||..++.....+.                         
T Consensus        77 ~~~~~~~~~~~~~~~i~~--~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-------------------------  129 (333)
T 2dg1_A           77 EIKRPFVSHKANPAAIKI--HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-------------------------  129 (333)
T ss_dssp             CEEEEEECSSSSEEEEEE--CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-------------------------
T ss_pred             cEEEEeeCCCCCcceEEE--CCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-------------------------
Confidence            765433344566777766  5567777776665    578888876654221110                         


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeC------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE-eCCCeE
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSD------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTI  246 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v  246 (320)
                      ...+...+..++++|+|+.+++...      .+.|..+|..+++.......   ...+..++|+|+|+.|+.+ +.++.|
T Consensus       130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~i  206 (333)
T 2dg1_A          130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETTANRL  206 (333)
T ss_dssp             SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred             cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCCCCeE
Confidence            0012346889999999988777654      35566666654433222111   1124678899999866544 567899


Q ss_pred             EEEcCCC-CeEEE--------EeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        247 NVWDSLK-CCRVN--------HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       247 ~~wd~~~-~~~~~--------~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+||... +....        .+.++ ..+..|+++++|+++++...++.|++|+..
T Consensus       207 ~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~  262 (333)
T 2dg1_A          207 HRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR  262 (333)
T ss_dssp             EEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             EEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence            9999743 22111        11222 467899999999998888888999999864

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.61  E-value=1e-13  Score=131.83  Aligned_cols=237  Identities=13%  Similarity=-0.038  Sum_probs=149.1

Q ss_pred             ceEEEEEcCCCCEEE-----EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe-------
Q psy14961         21 WVMACAYAPSGSVVA-----SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT-------   88 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~-----s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~-------   88 (320)
                      .+.+++|||||++||     .|+.+..|++||+......  ....+...  ....+.|+++++.|+.++.|..       
T Consensus       122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~--~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~  197 (695)
T 2bkl_A          122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS--KVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDE  197 (695)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC--SSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred             EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc--CCcccCcc--cccceEEecCCCEEEEEEecCCCCCcccc
Confidence            588999999999998     4455678999998643211  01111111  1156889999999999888776       


Q ss_pred             ------EEEEECCCcc----eeeecccCccceeEEEEeeCCCCCEEEEEeCCC----eEEEEeCCCCcEEEEeccCCccc
Q psy14961         89 ------CALWDVESSQ----LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK----LVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        89 ------v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg----~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                            |++|++.++.    ++.....+...+..+.+  +++|+.|+.++.++    .|.+||..++..           
T Consensus       198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-----------  264 (695)
T 2bkl_A          198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL--SRDGKYLFVYILRGWSENDVYWKRPGEKDF-----------  264 (695)
T ss_dssp             GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE--CTTSCCEEEEEEETTTEEEEEEECTTCSSC-----------
T ss_pred             CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE--CCCCCEEEEEEeCCCCceEEEEEcCCCCce-----------
Confidence                  9999998765    33333334445555554  66788888776655    455554433221           


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCCee---EeEEecCcceeeeEEE
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRADKE---VACYKKDSILFGATSV  228 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~  228 (320)
                                       ..+..+...+....+ |+|..+++..   .++.|.+||+.+++.   ........ ...+..+
T Consensus       265 -----------------~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~  325 (695)
T 2bkl_A          265 -----------------RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS-SASLLSV  325 (695)
T ss_dssp             -----------------EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEE
T ss_pred             -----------------EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEE
Confidence                             111223334445555 5566444443   368899999976642   22222211 1124566


Q ss_pred             EEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeecC-CCceeEEEECcCCCeEE----EecCCCceEeeecc
Q psy14961        229 DFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMGH-ENRVSCLQVSPDGTAFS----SGSWDTTLRDEESK  294 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h-~~~i~~i~~s~~~~~l~----s~s~D~~ir~~~~~  294 (320)
                      +++ ++.++++...++..++|... .+.....+..+ ...|..++++||++.|+    +...+++|..|+..
T Consensus       326 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~  396 (695)
T 2bkl_A          326 SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS  396 (695)
T ss_dssp             EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred             EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence            777 77888888899988887533 24444555544 66788999999998777    55567889999864

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.61  E-value=1.1e-12  Score=110.81  Aligned_cols=203  Identities=11%  Similarity=0.144  Sum_probs=140.8

Q ss_pred             ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeeccc------CccceeEEEEeeCCCCCEEEEEeC-CCeEEE
Q psy14961         63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG------HTGELMDLDLAPSETGNTFVSGSS-DKLVNI  135 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~l  135 (320)
                      ++.....++.+.+++..+++...++.|.+||.+ ++.+..+..      +...+..+++. .++++.+++... ++.|.+
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~-~~~g~l~v~~~~~~~~i~~  104 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV-RNSGDIIVTERSPTHQIQI  104 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE-TTTTEEEEEECGGGCEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEE-cCCCeEEEEcCCCCCEEEE
Confidence            344567788898888877777889999999987 555544432      22345566553 234555555433 788888


Q ss_pred             EeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       136 wd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      || .++..+..+.                          ..+...+..++++|+|+.+++...++.|.+||.. ++.+..
T Consensus       105 ~d-~~g~~~~~~~--------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~  156 (286)
T 1q7f_A          105 YN-QYGQFVRKFG--------------------------ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHK  156 (286)
T ss_dssp             EC-TTSCEEEEEC--------------------------TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred             EC-CCCcEEEEec--------------------------CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEE
Confidence            88 4444333221                          0123457899999999988888888999999965 444444


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCC-ceEeee
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDT-TLRDEE  292 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~-~ir~~~  292 (320)
                      +........+..++++|+|.++++...++.|.+||.. +..+..+..+  ...+..|+++|+|+++++...++ .|++|+
T Consensus       157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~  235 (286)
T 1q7f_A          157 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT  235 (286)
T ss_dssp             EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred             eCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence            4322222235789999999988888889999999974 4455555433  36789999999999999988886 999999


Q ss_pred             cchH
Q psy14961        293 SKNR  296 (320)
Q Consensus       293 ~~~~  296 (320)
                      ....
T Consensus       236 ~~g~  239 (286)
T 1q7f_A          236 QDGQ  239 (286)
T ss_dssp             TTSC
T ss_pred             CCCC
Confidence            6543

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.60  E-value=1.1e-12  Score=113.19  Aligned_cols=253  Identities=9%  Similarity=-0.007  Sum_probs=163.5

Q ss_pred             eEeecccceeEEEEEe------CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          2 IIWDGLTQTKEHSVTM------PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~------~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      .++|..+++....+..      -......+.++ ++++.++...++.|.++|....    ....++. .......+.+++
T Consensus        20 ~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~----~~~~~i~-~~~~p~~i~~~~   93 (328)
T 3dsm_A           20 SYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF----KEVGRIT-GFTSPRYIHFLS   93 (328)
T ss_dssp             EEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC----CEEEEEE-CCSSEEEEEEEE
T ss_pred             EEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc----EEEEEcC-CCCCCcEEEEeC
Confidence            4677777665432210      01234667774 4455666667899999987532    2222232 234566777866


Q ss_pred             CCCEEEEEe-CCCeEEEEECCCcceeeecccCc-----cceeEEEEeeCCCCCEEEEEe--CCCeEEEEeCCCCcEEEEe
Q psy14961         76 SDQQILTGS-GDCTCALWDVESSQLLQSFHGHT-----GELMDLDLAPSETGNTFVSGS--SDKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        76 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~s~~--~dg~i~lwd~~~~~~~~~~  147 (320)
                      ++ .++.+. .++.|.+||+.+++....+....     .....+++    ++..++.+.  .++.|.++|+.+++.+..+
T Consensus        94 ~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~----~~~~lyv~~~~~~~~v~viD~~t~~~~~~i  168 (328)
T 3dsm_A           94 DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ----YGKYVYVNCWSYQNRILKIDTETDKVVDEL  168 (328)
T ss_dssp             TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE----ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred             CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE----ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence            66 566665 78999999999988776655322     03344554    234555554  3778888888776654432


Q ss_pred             ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC----------CeEEEEECCCCeeEeEEe
Q psy14961        148 EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD----------ATCRLFDLRADKEVACYK  217 (320)
Q Consensus       148 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d----------g~i~iwd~~~~~~~~~~~  217 (320)
                      .                           . ......++++|+|+.++++..+          +.|.++|..+++....+.
T Consensus       169 ~---------------------------~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~  220 (328)
T 3dsm_A          169 T---------------------------I-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK  220 (328)
T ss_dssp             E---------------------------C-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred             E---------------------------c-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence            1                           1 1123468889999877777655          789999998887655443


Q ss_pred             cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-Eeec-CCCceeEEEECc-CCCeEEEe----cCCCceEe
Q psy14961        218 KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMG-HENRVSCLQVSP-DGTAFSSG----SWDTTLRD  290 (320)
Q Consensus       218 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~-h~~~i~~i~~s~-~~~~l~s~----s~D~~ir~  290 (320)
                      .... ..+..++|+|+++.|+++..  .|.+||..+..... .+.. +.....+|+++| +++++++.    ..+++|.+
T Consensus       221 ~~~g-~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v  297 (328)
T 3dsm_A          221 FKLG-DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR  297 (328)
T ss_dssp             CCTT-CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred             cCCC-CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence            2211 13578999999999888765  89999987665432 1222 245789999999 67777777    67899999


Q ss_pred             eecchH
Q psy14961        291 EESKNR  296 (320)
Q Consensus       291 ~~~~~~  296 (320)
                      |+....
T Consensus       298 ~d~~g~  303 (328)
T 3dsm_A          298 YSPQGK  303 (328)
T ss_dssp             ECTTCC
T ss_pred             ECCCCC
Confidence            997644

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.59  E-value=5.6e-13  Score=115.56  Aligned_cols=243  Identities=9%  Similarity=0.048  Sum_probs=146.1

Q ss_pred             ccceEEEEEcCCCCEEEEec---------CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC---
Q psy14961         19 ATWVMACAYAPSGSVVASGG---------LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD---   86 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~---------~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---   86 (320)
                      ...+...++  ||+.|+...         .++.|.+|++....     ...+    ..+....|+|+++.|+..+.+   
T Consensus        14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l----~~~~~~~~SpDg~~la~~~~~~~~   82 (347)
T 2gop_A           14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA-----RRFI----ENATMPRISPDGKKIAFMRANEEK   82 (347)
T ss_dssp             SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC-----EEEE----ESCEEEEECTTSSEEEEEEEETTT
T ss_pred             eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc-----eEEc----ccCCCeEECCCCCEEEEEEeccCC
Confidence            345677778  888887652         25567788764321     1122    457788999999998877653   


Q ss_pred             C--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe----ccCCccccCCCeE
Q psy14961         87 C--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF----EGHHNLITDDKLV  160 (320)
Q Consensus        87 g--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~----~~~~~~~~~d~~i  160 (320)
                      +  .|.+|++.+++.......+ . +..+.|  +|+|+.|+.++.+..    +-.....+..+    .+..........|
T Consensus        83 ~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~w--spdg~~l~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~l  154 (347)
T 2gop_A           83 KVSEIWVADLETLSSKKILEAK-N-IRSLEW--NEDSRKLLIVGFKRR----EDEDFIFEDDVPAWFDDLGFFDGEKTTF  154 (347)
T ss_dssp             TEEEEEEEETTTTEEEEEEEES-E-EEEEEE--CTTSSEEEEEEECCC----C---------CCCC---------CEEEE
T ss_pred             CcceEEEEECCCCceEEEEcCC-C-ccceeE--CCCCCEEEEEEccCC----CcCCcEEEcccceeecCcccccCccceE
Confidence            3  4777788877665444332 3 666666  557888887764310    00000000000    0000000113467


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC-------eEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA-------TCRLFDLRADKEVACYKKDSILFGATSVDFSVS  233 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~  233 (320)
                      .+||+.+++.+..+.. . .+..++|+|+| .+++++.+.       ...||.+++++.......    .....  ++|+
T Consensus       155 ~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~----~~~~~--~spd  225 (347)
T 2gop_A          155 WIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK----VSFYA--VDSD  225 (347)
T ss_dssp             EEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE----ESEEE--EEEC
T ss_pred             EEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC----cceee--ECCC
Confidence            8888887766344433 3 67899999999 777776542       334444434443322222    11222  3999


Q ss_pred             CcEEEEEeCC--------CeEEEEcCCCCeEEEEeecCCCceeE-EEECcCCCeEEEecCCCceEeeecc
Q psy14961        234 GRLLFAGYND--------YTINVWDSLKCCRVNHLMGHENRVSC-LQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       234 ~~~l~~g~~d--------g~v~~wd~~~~~~~~~~~~h~~~i~~-i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      |++|+.++.+        ..|.+||  ++.......+|...+.. ++|+ |+ ++++++.|+.+++| ..
T Consensus       226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~  290 (347)
T 2gop_A          226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW  290 (347)
T ss_dssp             SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred             CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence            9988887743        4788888  44433333456778886 9999 98 99999999999999 65

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.59  E-value=9.8e-13  Score=113.60  Aligned_cols=221  Identities=8%  Similarity=0.064  Sum_probs=146.9

Q ss_pred             CeEeecccceeEEEEE-eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc---------cccccCeEE
Q psy14961          1 MIIWDGLTQTKEHSVT-MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV---------ATHTSFISC   70 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~-~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~---------~~h~~~v~~   70 (320)
                      |.+||..+++...... .+......++++|+|+++++...++.|++|+.+....   ....+         ..+......
T Consensus        71 i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~~P~~  147 (329)
T 3fvz_A           71 ILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEG---PLLILGRSMQPGSDQNHFCQPTD  147 (329)
T ss_dssp             EEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSC---CSEEESBTTBCCCSTTCCSSEEE
T ss_pred             EEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeE---EEEEecccCCCCCCccccCCCcE
Confidence            3578877776654332 1224578999999999999988899999998643210   11111         233445778


Q ss_pred             EEecC-CCCEEEEEe-CCCeEEEEECCCcceeeecccCc----------cceeEEEEeeCCC-CCEEEEEeCCCeEEEEe
Q psy14961         71 CIFPN-SDQQILTGS-GDCTCALWDVESSQLLQSFHGHT----------GELMDLDLAPSET-GNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        71 ~~~~~-~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~-~~~l~s~~~dg~i~lwd  137 (320)
                      +.+.+ ++..+++.+ .++.|++|+. ++..+..+....          .....+++.  ++ +..+++...++.|++||
T Consensus       148 ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d--~~~g~l~v~d~~~~~I~~~~  224 (329)
T 3fvz_A          148 VAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALV--PHLDQLCVADRENGRIQCFK  224 (329)
T ss_dssp             EEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEE--TTTTEEEEEETTTTEEEEEE
T ss_pred             EEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEE--CCCCEEEEEECCCCEEEEEE
Confidence            99988 666666665 5899999994 566555553221          225566664  44 56666777788899999


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC------CCCEEEEeeCCCeEEEEECCCCe
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP------SGDAVATGSDDATCRLFDLRADK  211 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p------~g~~l~s~s~dg~i~iwd~~~~~  211 (320)
                      ..+++.+..+..                         ..+...+..++++|      +|+.+++.+.+..+++||+.+++
T Consensus       225 ~~~G~~~~~~~~-------------------------~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~  279 (329)
T 3fvz_A          225 TDTKEFVREIKH-------------------------ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE  279 (329)
T ss_dssp             TTTCCEEEEECC-------------------------TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC
T ss_pred             CCCCcEEEEEec-------------------------cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe
Confidence            877765554321                         12444567788888      34433334455689999999888


Q ss_pred             eEeEEecC-cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        212 EVACYKKD-SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       212 ~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      .+..+... .....+..++++|+|.++++...++.|.+|+..
T Consensus       280 ~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~  321 (329)
T 3fvz_A          280 IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT  321 (329)
T ss_dssp             EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred             EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence            77665321 122335789999999888888889999999853

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.59  E-value=9.8e-12  Score=106.05  Aligned_cols=243  Identities=12%  Similarity=0.117  Sum_probs=150.1

Q ss_pred             cceEEEEEcCCCCEEEE-------ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         20 TWVMACAYAPSGSVVAS-------GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s-------~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      ....+++|+++|.++++       +..++.|.+|+...............++...+..+.+.+++..++.++..+.|.+|
T Consensus        18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~   97 (314)
T 1pjx_A           18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV   97 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence            45578999999988888       67788999997532211100000001244567788888873455555555589999


Q ss_pred             ECCCcceeee-ccc----CccceeEEEEeeCCCCCEEEEEeCC---------------CeEEEEeCCCCcEEEEeccCCc
Q psy14961         93 DVESSQLLQS-FHG----HTGELMDLDLAPSETGNTFVSGSSD---------------KLVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        93 d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~l~s~~~d---------------g~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      |.+ ++.... ...    ....+..+++  +++|+..++...+               +.|..+|.. ++          
T Consensus        98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~--d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~----------  163 (314)
T 1pjx_A           98 QTD-GTFEEIAKKDSEGRRMQGCNDCAF--DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ----------  163 (314)
T ss_dssp             ETT-SCEEECCSBCTTSCBCBCCCEEEE--CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----------
T ss_pred             eCC-CCEEEEEeccCCCccccCCcCEEE--CCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----------
Confidence            988 654332 211    1123555655  5567766665443               234334332 21          


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc----CCCCEE-EEeeCCCeEEEEECC-CCeeE--eEEec-Ccce-
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH----PSGDAV-ATGSDDATCRLFDLR-ADKEV--ACYKK-DSIL-  222 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~----p~g~~l-~s~s~dg~i~iwd~~-~~~~~--~~~~~-~~~~-  222 (320)
                                       ... +..+......++++    |+++.+ ++...++.|.+||+. .++..  ..+.. .... 
T Consensus       164 -----------------~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~  225 (314)
T 1pjx_A          164 -----------------MIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE  225 (314)
T ss_dssp             -----------------EEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred             -----------------EEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence                             111 11122345789999    999765 444568899999976 34321  11111 1000 


Q ss_pred             eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecc
Q psy14961        223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESK  294 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~  294 (320)
                      ..+..++++++|.++++...++.|..||..++..+..+..+...+.+++|+|+++ ++++...++.|..++..
T Consensus       226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~  298 (314)
T 1pjx_A          226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence            2346788999999888888889999999875655555666667899999999999 55666667788888754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.59  E-value=1.8e-12  Score=109.16  Aligned_cols=220  Identities=12%  Similarity=0.056  Sum_probs=156.7

Q ss_pred             CCCCEEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCc
Q psy14961         29 PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHT  107 (320)
Q Consensus        29 ~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  107 (320)
                      ..+++|++++.++.|.+||...    .....++..+. ..+.++.+.++++.++  +.++.|..||. +++.+..+..+.
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~t----G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~   75 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDT----KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPA   75 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTT----TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCT
T ss_pred             CCCcEEEeeCCCCEEEEEECCC----CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCC
Confidence            3457899999999999998632    22233344443 3567788889998777  45788999999 788888887542


Q ss_pred             -cceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEE
Q psy14961        108 -GELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVK  185 (320)
Q Consensus       108 -~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~  185 (320)
                       ..+.++.  +.++|+.+++.+. ++.+..+|. .|+.+..+.                +..+     ..++......++
T Consensus        76 ~~~~~~~~--~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~----------------~~~~-----~~~~~~~~~~v~  131 (276)
T 3no2_A           76 GCEMQTAR--ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTE----------------FETG-----IERPHAQFRQIN  131 (276)
T ss_dssp             TCEEEEEE--ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEE----------------ECCS-----CSSGGGSCSCCE
T ss_pred             CccccccE--ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEe----------------ccCC-----CCcccccccCce
Confidence             3454444  4678999998877 777777775 555544432                1110     011112334567


Q ss_pred             EcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-
Q psy14961        186 FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-  264 (320)
Q Consensus       186 ~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-  264 (320)
                      +.++|+++++...++.|..||.. ++.+..+.....   +..+.+.++|.+++++..++.|..+|..+++.+-++..+. 
T Consensus       132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~---~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~  207 (276)
T 3no2_A          132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGT---PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDI  207 (276)
T ss_dssp             ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSC---CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS
T ss_pred             ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCC---ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC
Confidence            88999999999999999999988 877766655422   2356678999999999988899999998888877775432 


Q ss_pred             -----CceeEEEECcCCCeEEEec
Q psy14961        265 -----NRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       265 -----~~i~~i~~s~~~~~l~s~s  283 (320)
                           ..+..++..++|.++++.+
T Consensus       208 ~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          208 EGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             BSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             CCccccccccceEcCCCCEEEEec
Confidence                 2378999999999998873

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.57  E-value=2.2e-11  Score=112.46  Aligned_cols=287  Identities=15%  Similarity=0.131  Sum_probs=183.4

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec----CCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP----NSD   77 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~   77 (320)
                      .++|..+++....+... ..+..+.|+|||+++++++.|+.|.+||+....  .....++... ..-..+.|+    +++
T Consensus       180 ~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t--~~~v~~i~~G-~~P~~ia~s~~~~pDG  255 (567)
T 1qks_A          180 ALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE--PTTVAEIKIG-SEARSIETSKMEGWED  255 (567)
T ss_dssp             EEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSS--CCEEEEEECC-SEEEEEEECCSTTCTT
T ss_pred             EEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCC--CcEeEEEecC-CCCceeEEccccCCCC
Confidence            47888888877766643 456789999999999999999999999973111  1122223222 223567888    589


Q ss_pred             CEEEEEeC-CCeEEEEECCCcceeeecccCc----------c-ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE-
Q psy14961         78 QQILTGSG-DCTCALWDVESSQLLQSFHGHT----------G-ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV-  144 (320)
Q Consensus        78 ~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~----------~-~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~-  144 (320)
                      +++++++. +++|.++|..+.+++..+....          . .+..+..++. ...+++....+|.|.+.|......+ 
T Consensus       256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~-~~~~vv~~~~~g~v~~vd~~~~~~~~  334 (567)
T 1qks_A          256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY-RPEFIVNVKETGKILLVDYTDLNNLK  334 (567)
T ss_dssp             TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS-SSEEEEEETTTTEEEEEETTCSSEEE
T ss_pred             CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC-CCEEEEEecCCCeEEEEecCCCccce
Confidence            98887765 5999999999988877654211          1 3444443322 2345556667799999998654321 


Q ss_pred             -EE-----------eccCCc--cc--cCCCeEEEEECcCCeeeeeecC-----CCCCeEEEEEcCCCCEE-EEee-CCCe
Q psy14961        145 -QS-----------FEGHHN--LI--TDDKLVNIWDMRTGYCVQSFEG-----HQSDVNSVKFHPSGDAV-ATGS-DDAT  201 (320)
Q Consensus       145 -~~-----------~~~~~~--~~--~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~v~~~p~g~~l-~s~s-~dg~  201 (320)
                       ..           ++....  .+  ..++.|.++|..+++.+..+.-     |...-..+ ++|++..+ ++.. .++.
T Consensus       335 v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~  413 (567)
T 1qks_A          335 TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDS  413 (567)
T ss_dssp             EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred             eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCe
Confidence             11           111111  11  2457799999999887665543     33222222 68875544 4543 4689


Q ss_pred             EEEEECCC-------CeeEeEEecCcceeeeEEEEEecCCcEEEEEeC-------CCeEEEEcCCCC-----eEE-EEee
Q psy14961        202 CRLFDLRA-------DKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-------DYTINVWDSLKC-----CRV-NHLM  261 (320)
Q Consensus       202 i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-------dg~v~~wd~~~~-----~~~-~~~~  261 (320)
                      |.++|..+       .+.+.......  .+..-+.++|++++|.+...       ..+|.++|..+.     ... ..+.
T Consensus       414 Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~  491 (567)
T 1qks_A          414 VALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLP  491 (567)
T ss_dssp             EEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEEC
T ss_pred             EEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEec
Confidence            99999887       34444443321  11234678999999988763       358999997655     211 2221


Q ss_pred             --------cCCCceeEEEECcCCCeEEEecC-----CCceEeeecchH
Q psy14961        262 --------GHENRVSCLQVSPDGTAFSSGSW-----DTTLRDEESKNR  296 (320)
Q Consensus       262 --------~h~~~i~~i~~s~~~~~l~s~s~-----D~~ir~~~~~~~  296 (320)
                              .-...+..+.|+|+|+.+..+-+     ++.|.+.|.++.
T Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~  539 (567)
T 1qks_A          492 IAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  539 (567)
T ss_dssp             HHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             cccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence                    12347899999999998666533     789999997543

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.55  E-value=2.6e-11  Score=111.97  Aligned_cols=263  Identities=8%  Similarity=-0.018  Sum_probs=173.0

Q ss_pred             EcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC--Ccceeeecc
Q psy14961         27 YAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE--SSQLLQSFH  104 (320)
Q Consensus        27 ~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~  104 (320)
                      .++.+.++++...++.|.++|....    .....+.. ......+.++++++++++++.|+.|.+||+.  +++.+..+.
T Consensus       163 ~d~~~~~~V~~~~~~~V~viD~~t~----~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~  237 (567)
T 1qks_A          163 WDLENLFSVTLRDAGQIALIDGSTY----EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK  237 (567)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTC----CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred             cCCCceEEEEeCCCCeEEEEECCCC----eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence            3455667778888999999997532    12222322 2234578899999999999999999999995  777777666


Q ss_pred             cCccceeEEEEee--CCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCC----------c--------------c---c
Q psy14961        105 GHTGELMDLDLAP--SETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHH----------N--------------L---I  154 (320)
Q Consensus       105 ~~~~~v~~~~~~~--~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~----------~--------------~---~  154 (320)
                      ... ....+++++  .++|+++++++. ++.+.++|..+.+.+..+....          .              .   +
T Consensus       238 ~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~  316 (567)
T 1qks_A          238 IGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV  316 (567)
T ss_dssp             CCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             cCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence            433 334565541  147888887665 5899999999888776653210          0              0   1


Q ss_pred             cCCCeEEEEECcCCee--eeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEec-CcceeeeEEE-E
Q psy14961        155 TDDKLVNIWDMRTGYC--VQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYKK-DSILFGATSV-D  229 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~-~  229 (320)
                      .+.+.|.++|..+...  +..+ ........+.|+|+|+++++++ .++.|.++|+.+++.+..... .........+ .
T Consensus       317 ~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~  395 (567)
T 1qks_A          317 KETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF  395 (567)
T ss_dssp             TTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred             cCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence            2346777777765421  1222 1233466889999999886554 678999999999887665543 2211100111 2


Q ss_pred             EecCCc-EEEEEe-CCCeEEEEcCCC-------CeEEEEeecCCCceeEEEECcCCCeEEEecC-------CCceEeeec
Q psy14961        230 FSVSGR-LLFAGY-NDYTINVWDSLK-------CCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-------DTTLRDEES  293 (320)
Q Consensus       230 ~s~~~~-~l~~g~-~dg~v~~wd~~~-------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-------D~~ir~~~~  293 (320)
                      ++|++. .++++. .+++|.++|...       .+.+.++......-..|+.+||+++|.....       ..+|.++|.
T Consensus       396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~  475 (567)
T 1qks_A          396 VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI  475 (567)
T ss_dssp             EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred             ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence            688755 445553 468999999876       5566777655444356889999998877552       358899987


Q ss_pred             chH
Q psy14961        294 KNR  296 (320)
Q Consensus       294 ~~~  296 (320)
                      .+.
T Consensus       476 ~~~  478 (567)
T 1qks_A          476 KAM  478 (567)
T ss_dssp             GGC
T ss_pred             Ccc
Confidence            543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.55  E-value=5.9e-11  Score=104.20  Aligned_cols=259  Identities=10%  Similarity=-0.058  Sum_probs=168.1

Q ss_pred             EEcCCCCEEEEecC--CC---eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEE
Q psy14961         26 AYAPSGSVVASGGL--DN---KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCA   90 (320)
Q Consensus        26 ~~~~~~~~l~s~~~--dg---~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~   90 (320)
                      ...|++.+++.+..  ..   .|.+||....    .....+..-..+  .+.+++++++++.+.          .++.|.
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~----~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~  100 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSG----SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE  100 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCC----eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence            34578887777653  22   7788887432    122233322222  788999999999886          367899


Q ss_pred             EEECCCcceeeecccC-------ccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEE-eccCC---------
Q psy14961         91 LWDVESSQLLQSFHGH-------TGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQS-FEGHH---------  151 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~-~~~~~---------  151 (320)
                      +||+.+.+.+..+...       ...-..+.  .+++|++|+.++.  ++.|.++| .+++.+.. +.-..         
T Consensus       101 viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~--~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~  177 (373)
T 2mad_H          101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNA--NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAP  177 (373)
T ss_pred             EEECCCCcEEEEEECCCccccccCCCccceE--ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCC
Confidence            9999988777655422       01122344  4678999998874  47899999 99988776 53211         


Q ss_pred             ---ccccCCCeEEEEECcCCeeeeeec-----CCCCC-eEEEEEcCCCCEEEEeeCCCeEEEEECCCCee--EeEEecCc
Q psy14961        152 ---NLITDDKLVNIWDMRTGYCVQSFE-----GHQSD-VNSVKFHPSGDAVATGSDDATCRLFDLRADKE--VACYKKDS  220 (320)
Q Consensus       152 ---~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~-v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~  220 (320)
                         ...+.++.+.++|. +++......     ....+ .....+.+++..++..+.++.+.+.|+.....  ...+....
T Consensus       178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~  256 (373)
T 2mad_H          178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS  256 (373)
T ss_pred             ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence               12346788888888 766553221     11112 13356677766655555778999999865432  11111100


Q ss_pred             --------ceeeeEEEEEecCCcEEEEEeC----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEE
Q psy14961        221 --------ILFGATSVDFSVSGRLLFAGYN----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSS  281 (320)
Q Consensus       221 --------~~~~~~~~~~s~~~~~l~~g~~----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s  281 (320)
                              ...+...+.++|+++.++++..          ++.|.+.|..+.+.+.++. -.....+++|+|||+ +|++
T Consensus       257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v  335 (373)
T 2mad_H          257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYA  335 (373)
T ss_pred             CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEE
Confidence                    0112234778999998887653          3579999999988887774 233578999999999 7888


Q ss_pred             ec-CCCceEeeecch
Q psy14961        282 GS-WDTTLRDEESKN  295 (320)
Q Consensus       282 ~s-~D~~ir~~~~~~  295 (320)
                      +. .++++.++|.+.
T Consensus       336 ~~~~~~~V~ViD~~t  350 (373)
T 2mad_H          336 LSAGTEVLHIYDAGA  350 (373)
T ss_pred             EcCCCCeEEEEECCC
Confidence            77 489999999754

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.54  E-value=8.9e-11  Score=103.05  Aligned_cols=245  Identities=10%  Similarity=-0.031  Sum_probs=158.3

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccc--c---ccc
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVA--T---HTS   66 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~--~---h~~   66 (320)
                      .++|..+.+....+.....  ..++|+|||++|+.+.          .++.|.+||....... ... .+.  .   +..
T Consensus        50 ~v~D~~t~~~~~~i~~g~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~-~~i-~~~~~~~~~~g~  125 (373)
T 2mad_H           50 WVLDAGSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI-ADI-ELPDAPRFDVGP  125 (373)
T ss_pred             EEEECCCCeEEEEecCCCC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE-EEE-ECCCccccccCC
Confidence            5788888777655443323  3899999999998885          3678999987421110 100 011  0   011


Q ss_pred             CeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeee-cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         67 FISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      .-..+.+++++++|++++.  ++.|.++| .+++.+.. +... +   ++.+.+.. ...+++.+.||.+.++|. +++.
T Consensus       126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~-~~~~~~~~~dg~~~~vd~-~g~~  198 (373)
T 2mad_H          126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGA-PSTFYLLCAQGGLAKTDH-AGGA  198 (373)
T ss_pred             CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCC-CceEEEEcCCCCEEEEEC-CCcE
Confidence            2346789999999998874  57899999 99988776 5432 1   13333332 246677788999999999 7765


Q ss_pred             EEEec------c---------------CCccccCCCeEEEEECcCCe--eeeeecC----------CCCCeEEEEEcCCC
Q psy14961        144 VQSFE------G---------------HHNLITDDKLVNIWDMRTGY--CVQSFEG----------HQSDVNSVKFHPSG  190 (320)
Q Consensus       144 ~~~~~------~---------------~~~~~~~d~~i~iwd~~~~~--~~~~~~~----------~~~~v~~v~~~p~g  190 (320)
                      .....      +               ....++..+.+.+.|+....  .+..+.-          .......++++|++
T Consensus       199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~  278 (373)
T 2mad_H          199 AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS  278 (373)
T ss_pred             EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCC
Confidence            52211      0               00111234567777775432  1122210          11223447899999


Q ss_pred             CEEEEeeC----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEE
Q psy14961        191 DAVATGSD----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVN  258 (320)
Q Consensus       191 ~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~  258 (320)
                      +.++.+..          ++.|.++|+.+.+.+..++...   ....+.|+|||+ .++++. .++.|.++|+.+.+.+.
T Consensus       279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~  355 (373)
T 2mad_H          279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ  355 (373)
T ss_pred             CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence            88776543          3589999999988877665432   246789999999 777776 58999999999888887


Q ss_pred             Ee
Q psy14961        259 HL  260 (320)
Q Consensus       259 ~~  260 (320)
                      +.
T Consensus       356 ~i  357 (373)
T 2mad_H          356 ST  357 (373)
T ss_pred             ee
Confidence            64

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.54  E-value=2.3e-10  Score=96.53  Aligned_cols=260  Identities=8%  Similarity=0.049  Sum_probs=165.0

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      .....+++++++|++.++...++.|.+|+.. ...  . ...+..+...+..+.+.+++..+++...++.|..+|.. ++
T Consensus        19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~   93 (300)
T 2qc5_A           19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI--K-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG   93 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE--E-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce--E-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence            4577899999999988888778999999764 111  1 11122233567788888888766666667899999987 54


Q ss_pred             eee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-eccC------------Cc-ccc--CCCeEE
Q psy14961         99 LLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEGH------------HN-LIT--DDKLVN  161 (320)
Q Consensus        99 ~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~------------~~-~~~--~d~~i~  161 (320)
                      ... ........+..+++  .++|+.+++...++.|..+|.. +..... +...            .. .+.  ..+.|.
T Consensus        94 ~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~  170 (300)
T 2qc5_A           94 FTEYPLPQPDSGPYGITE--GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG  170 (300)
T ss_dssp             EEEEECSSTTCCEEEEEE--CSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred             eEEecCCCCCCCCccceE--CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence            432 22222344555655  4567777777668889999987 543321 1110            00 111  145677


Q ss_pred             EEECcCCeeee-eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        162 IWDMRTGYCVQ-SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       162 iwd~~~~~~~~-~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                      .+|. +++... ....+...+..++++++|..+++...++.|..+|. .++... +........+..++++++|.+.++.
T Consensus       171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~  247 (300)
T 2qc5_A          171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTPNARPHAITAGKNSEIWFTE  247 (300)
T ss_dssp             EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEE
T ss_pred             EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCCCCCceEEEECCCCCEEEec
Confidence            7776 443322 22234456889999999987777777788999998 343322 2211112235678899999977776


Q ss_pred             eCCCeEEEEcCCCCeEE-EEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        241 YNDYTINVWDSLKCCRV-NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       241 ~~dg~v~~wd~~~~~~~-~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ..++.|..||.. +... ..+......+.+|+++++|+++++.. . .|..++
T Consensus       248 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~  297 (300)
T 2qc5_A          248 WGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN  297 (300)
T ss_dssp             TTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred             cCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence            667899999974 3332 22233456789999999999877665 4 554444

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.52  E-value=5.3e-12  Score=106.26  Aligned_cols=185  Identities=9%  Similarity=0.083  Sum_probs=137.0

Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      .++.|++++.|+.|.+||.++++.+..+..+. ..+.++.+  .++|+.++  +.++.|..||. +++.+..+..     
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~--~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~-----   73 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA--TKAGEILF--SYSKGAKMITR-DGRELWNIAA-----   73 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE--CTTSCEEE--ECBSEEEEECT-TSCEEEEEEC-----
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE--CCCCCEEE--eCCCCEEEECC-CCCEEEEEcC-----
Confidence            46789999999999999999999998887665 35666665  45788777  44677888887 6665444321     


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCc----ceeeeEEEE
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDS----ILFGATSVD  229 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~  229 (320)
                                           +....+.++.+.|+|+++++.+. ++.+..+|. .++.+..+....    .......++
T Consensus        74 ---------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~  131 (276)
T 3no2_A           74 ---------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN  131 (276)
T ss_dssp             ---------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred             ---------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence                                 11234678899999999999887 778888885 566554443211    111223456


Q ss_pred             EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +.++|.++++.+.++.|..||.. ++.+-++..+ ..+.++.+.++|+++++++.+++|..++..
T Consensus       132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~  194 (276)
T 3no2_A          132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE  194 (276)
T ss_dssp             ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred             ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence            78999999999999999999987 7777766654 456678889999999999988888877754

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.51  E-value=6.2e-12  Score=119.81  Aligned_cols=247  Identities=10%  Similarity=0.014  Sum_probs=146.7

Q ss_pred             CCCCEEEEecCCC---eEEEEEecccCCccccc---ccc-cccccCeEEEEecCCCCEEEEEeCCC-----eEEEEECCC
Q psy14961         29 PSGSVVASGGLDN---KVTVYAIALEDDSSAKK---KTV-ATHTSFISCCIFPNSDQQILTGSGDC-----TCALWDVES   96 (320)
Q Consensus        29 ~~~~~l~s~~~dg---~i~v~~~~~~~~~~~~~---~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~   96 (320)
                      |+|++++....++   .-.+|..+.........   ..+ ..|...+....|++++++|+.+..++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            7888777654332   12455543221111110   111 12334577889999999988665433     899999999


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe----eee
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY----CVQ  172 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~----~~~  172 (320)
                      ++.+..... ...+..++|  ++||+.|+.++.++.       .+.    ..+..........|++|++.++.    .+.
T Consensus       161 g~~~~~~~~-~~~~~~~~w--spDg~~l~~~~~~~~-------~~~----~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~  226 (710)
T 2xdw_A          161 AKELPDVLE-RVKFSCMAW--THDGKGMFYNAYPQQ-------DGK----SDGTETSTNLHQKLYYHVLGTDQSEDILCA  226 (710)
T ss_dssp             TEEEEEEEE-EECSCCEEE--CTTSSEEEEEECCCC-------SSC----CSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred             CCCCccccc-CcccceEEE--EeCCCEEEEEEECCc-------ccc----ccccccccCCCCEEEEEECCCCcccceEEe
Confidence            887653221 222445666  557888988877654       000    00000000112345555555443    222


Q ss_pred             eecCCCCCeEEEEEcCCCCEEEEeeC-----CCeEEEEECCC------Ce-eEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        173 SFEGHQSDVNSVKFHPSGDAVATGSD-----DATCRLFDLRA------DK-EVACYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       173 ~~~~~~~~v~~v~~~p~g~~l~s~s~-----dg~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                      ....|...+..++|+|+|++|+..+.     +..|.+||+.+      +. ....+.....  . ....|+|+|..|+..
T Consensus       227 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~--~-~~~~~s~dg~~l~~~  303 (710)
T 2xdw_A          227 EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE--G-EYDYVTNEGTVFTFK  303 (710)
T ss_dssp             CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS--S-CEEEEEEETTEEEEE
T ss_pred             ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC--c-EEEEEeccCCEEEEE
Confidence            22335556789999999999877654     67899999875      32 2222222211  1 123488999988776


Q ss_pred             eCC----CeEEEEcCCCCe--EEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        241 YND----YTINVWDSLKCC--RVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       241 ~~d----g~v~~wd~~~~~--~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ++.    +.|.+||..+..  ....+.+|..  .+..++|++++.+++++..|+..++|.
T Consensus       304 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~  363 (710)
T 2xdw_A          304 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL  363 (710)
T ss_dssp             ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred             ECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence            653    469999987653  1244566654  688999998888999999998765543

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.51  E-value=3.7e-12  Score=121.06  Aligned_cols=241  Identities=9%  Similarity=-0.045  Sum_probs=143.8

Q ss_pred             cCCCCEEEEecCCC---eEEEEEecccCCcccccc---c-ccccccCeEEEEecCCCCEEE-----EEeCCCeEEEEECC
Q psy14961         28 APSGSVVASGGLDN---KVTVYAIALEDDSSAKKK---T-VATHTSFISCCIFPNSDQQIL-----TGSGDCTCALWDVE   95 (320)
Q Consensus        28 ~~~~~~l~s~~~dg---~i~v~~~~~~~~~~~~~~---~-~~~h~~~v~~~~~~~~~~~l~-----s~~~dg~v~iwd~~   95 (320)
                      +|+|.+++....++   .-.+|..+..........   . -..|...+....|+|++++|+     .|+.+..|++||+.
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~  155 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD  155 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence            37888887766544   345565432211111111   1 123445688899999999988     34445789999999


Q ss_pred             Cccee-eecccCccce--eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe---
Q psy14961         96 SSQLL-QSFHGHTGEL--MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY---  169 (320)
Q Consensus        96 ~~~~~-~~~~~~~~~v--~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~---  169 (320)
                      +++.+ ..   +...+  ..++|  +++|+.|+.++.|..      ..+        ..........|++|++.++.   
T Consensus       156 tg~~~~~~---~~~~~~~~~~~w--spDg~~l~~~~~d~~------~~~--------~~~~~~~~~~v~~~~l~t~~~~~  216 (695)
T 2bkl_A          156 SGEWSKVD---VIEGGKYATPKW--TPDSKGFYYEWLPTD------PSI--------KVDERPGYTTIRYHTLGTEPSKD  216 (695)
T ss_dssp             TCCBCSSC---CBSCCTTCCCEE--CTTSSEEEEEECCCC------TTS--------CGGGGGGGCEEEEEETTSCGGGC
T ss_pred             CCCCcCCc---ccCcccccceEE--ecCCCEEEEEEecCC------CCC--------ccccCCCCCEEEEEECCCCchhc
Confidence            98765 21   11122  34555  567889998887654      000        00000011234444443332   


Q ss_pred             -eeeeecCCCCCeEEEEEcCCCCEEEEeeCCC----eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC--
Q psy14961        170 -CVQSFEGHQSDVNSVKFHPSGDAVATGSDDA----TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN--  242 (320)
Q Consensus       170 -~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~--  242 (320)
                       ++.....|...+.++.|+|+|++|+..+.++    .|.+++..+++..........   .....+ ++|. ++..++  
T Consensus       217 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~---~~~~~~-~~g~-l~~~s~~~  291 (695)
T 2bkl_A          217 TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA---KYEVHA-WKDR-FYVLTDEG  291 (695)
T ss_dssp             EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC---CEEEEE-ETTE-EEEEECTT
T ss_pred             eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc---eEEEEe-cCCc-EEEEECCC
Confidence             2333344556788999999999988777665    677777655443332222221   223334 6777 555443  


Q ss_pred             --CCeEEEEcCCCCeE--EEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        243 --DYTINVWDSLKCCR--VNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       243 --dg~v~~wd~~~~~~--~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                        ++.|.+||..++..  ...+..|  ...|..++|+ ++.++++...|++.++|..
T Consensus       292 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~  347 (695)
T 2bkl_A          292 APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA  347 (695)
T ss_dssp             CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred             CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence              58899999866532  2344444  4568889998 7889999999999998864

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.48  E-value=1.1e-10  Score=103.89  Aligned_cols=240  Identities=12%  Similarity=0.099  Sum_probs=155.5

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC--eEEEEECCCcc
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC--TCALWDVESSQ   98 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~   98 (320)
                      ....++|+++++++++...++.|++||.....     ...+........ +.+.++++.|+++..++  .|.+++...+.
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-----~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~  205 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-----VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW  205 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTTTE-----EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCCCE-----EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence            46789999999988887778999999874211     111111112223 78889999999888766  78888877654


Q ss_pred             eeeec----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         99 LLQSF----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        99 ~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      ....+    ........++++.+  ++..|+.+..++.|..||..++... .+.+..                      .
T Consensus       206 ~~~~~g~~~~~~~~~p~~iav~p--~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~----------------------~  260 (409)
T 3hrp_A          206 APTRIGQLGSTFSGKIGAVALDE--TEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLE----------------------L  260 (409)
T ss_dssp             CEEEEEECCTTSCSCCCBCEECT--TSSEEEEECTTCEEEEEETTTCCEE-EEEECC----------------------C
T ss_pred             eeEEeeeccchhcCCcEEEEEeC--CCCeEEEEECCCcEEEEECCCCCEE-EEeccc----------------------c
Confidence            33332    11334456666644  2345666777888999998765421 110000                      0


Q ss_pred             cCCCC--CeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecC------------cceeeeEEEEEecCCcEEEE
Q psy14961        175 EGHQS--DVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKD------------SILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       175 ~~~~~--~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~~~l~~  239 (320)
                      .++..  +...++|+|+ +..+++-..++.|+.|+....... .....            .....+..++++|+|.++++
T Consensus       261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~-~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva  339 (409)
T 3hrp_A          261 SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEW-FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV  339 (409)
T ss_dssp             CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE-EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred             cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEE-EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence            01111  1138999995 555566677889999997754221 11111            00123578999999998777


Q ss_pred             Ee-CCCeEEEEcCCCCeEEEEeecC---------------CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        240 GY-NDYTINVWDSLKCCRVNHLMGH---------------ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       240 g~-~dg~v~~wd~~~~~~~~~~~~h---------------~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      -+ .++.|+.|+...+. +.++.++               -.....|+++|+|.++++-..+..||....
T Consensus       340 d~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          340 DGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             ETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             eCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            77 88999999966654 4445544               245899999999999999999999987764

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.46  E-value=2.8e-11  Score=102.64  Aligned_cols=199  Identities=12%  Similarity=0.099  Sum_probs=134.0

Q ss_pred             ccccCeEEEEecCCCC-EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC
Q psy14961         63 THTSFISCCIFPNSDQ-QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG  141 (320)
Q Consensus        63 ~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~  141 (320)
                      .+.....++.|.++++ .++++..++.|..|+..++  ...+..+...+.++++  +++|+++++...++.|.+||..++
T Consensus        25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~--~~dg~l~v~~~~~~~i~~~d~~~g  100 (296)
T 3e5z_A           25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCL--NKQGHLIACSHGLRRLERQREPGG  100 (296)
T ss_dssp             CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEE--CTTCCEEEEETTTTEEEEECSTTC
T ss_pred             cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeE--CCCCcEEEEecCCCeEEEEcCCCC
Confidence            3445567888998888 6777888999999999877  4555555666766665  557887777777789999998776


Q ss_pred             cEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE----ee-------------CCCeEEE
Q psy14961        142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT----GS-------------DDATCRL  204 (320)
Q Consensus       142 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s----~s-------------~dg~i~i  204 (320)
                      +........                .+       .....++.++++|+|+.+++    ++             ..+.|..
T Consensus       101 ~~~~~~~~~----------------~~-------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~  157 (296)
T 3e5z_A          101 EWESIADSF----------------EG-------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFR  157 (296)
T ss_dssp             CEEEEECEE----------------TT-------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred             cEEEEeecc----------------CC-------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEE
Confidence            543221100                00       01124567999999998887    33             1345656


Q ss_pred             EECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-CCeE---EEEeecCCCceeEEEECcCCCeEE
Q psy14961        205 FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-KCCR---VNHLMGHENRVSCLQVSPDGTAFS  280 (320)
Q Consensus       205 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~---~~~~~~h~~~i~~i~~s~~~~~l~  280 (320)
                      ++.. ++. ......  ...+..++|+|+|+.|++.+.++.|.+||.. .+..   ...+..+...+.+|+++++|++++
T Consensus       158 ~~~~-g~~-~~~~~~--~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v  233 (296)
T 3e5z_A          158 LAPD-GTL-SAPIRD--RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWA  233 (296)
T ss_dssp             ECTT-SCE-EEEECC--CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEE
T ss_pred             ECCC-CCE-EEeecC--CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEE
Confidence            6554 332 222221  1234678999999988777788999999975 3332   222333455678999999999877


Q ss_pred             EecCCCceEeeecc
Q psy14961        281 SGSWDTTLRDEESK  294 (320)
Q Consensus       281 s~s~D~~ir~~~~~  294 (320)
                      +.  ++.|++|+..
T Consensus       234 ~~--~~~v~~~~~~  245 (296)
T 3e5z_A          234 SA--GDGVHVLTPD  245 (296)
T ss_dssp             EE--TTEEEEECTT
T ss_pred             Ec--CCeEEEECCC
Confidence            76  7889999864

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.46  E-value=4.9e-11  Score=104.02  Aligned_cols=261  Identities=12%  Similarity=0.011  Sum_probs=170.9

Q ss_pred             EEEEcCCCCEEEEecC-----CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCe
Q psy14961         24 ACAYAPSGSVVASGGL-----DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCT   88 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~-----dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~   88 (320)
                      .....|++..+.....     ++.+.++|....    ....++..-..+  .+.++++++++++++          .++.
T Consensus        37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~----~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~  110 (386)
T 3sjl_D           37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG----RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDY  110 (386)
T ss_dssp             CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTT----EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred             eeccCCCCCEEEEEcCcccCCCCEEEEEECCCC----eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCE
Confidence            3456799998887755     678888886421    222333322233  388999999988775          3678


Q ss_pred             EEEEECCCcceeeecccCc-------cceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccC---------
Q psy14961         89 CALWDVESSQLLQSFHGHT-------GELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGH---------  150 (320)
Q Consensus        89 v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~---------  150 (320)
                      |.+||..+++.+..+....       ..-..+.+  +++|++++.++.  ++.|.++|+.+++.+.++.-.         
T Consensus       111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~--spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g  188 (386)
T 3sjl_D          111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL--TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTA  188 (386)
T ss_dssp             EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred             EEEEECCCCeEEEEEECCCccccccCCCCceEEE--cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCC
Confidence            9999999998887764321       12333555  667999988864  689999999999887776421         


Q ss_pred             -C--ccccCCCeEEEEECcC-CeeeeeecCC----CCCeE-EEEEc-CCCCEEEEeeCCCeEEEEECCCCee--EeEEe-
Q psy14961        151 -H--NLITDDKLVNIWDMRT-GYCVQSFEGH----QSDVN-SVKFH-PSGDAVATGSDDATCRLFDLRADKE--VACYK-  217 (320)
Q Consensus       151 -~--~~~~~d~~i~iwd~~~-~~~~~~~~~~----~~~v~-~v~~~-p~g~~l~s~s~dg~i~iwd~~~~~~--~~~~~-  217 (320)
                       .  ..++.|+.+.+.++.+ ++.......+    ..++. ...|. ++|+.++ .+.+|++.+.|+.+...  ...+. 
T Consensus       189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~  267 (386)
T 3sjl_D          189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA  267 (386)
T ss_dssp             TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred             CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence             1  1346788888888876 4432211111    12222 24664 6775444 55689999999976532  21111 


Q ss_pred             -------cCcceeeeEEEEEecCCcEEEEEeC----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eE
Q psy14961        218 -------KDSILFGATSVDFSVSGRLLFAGYN----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AF  279 (320)
Q Consensus       218 -------~~~~~~~~~~~~~s~~~~~l~~g~~----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l  279 (320)
                             ......+...++++|+++.|+....          ...|.+.|+.+.+.+.++.- ...+++|+|+||++ +|
T Consensus       268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~l  346 (386)
T 3sjl_D          268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLL  346 (386)
T ss_dssp             SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEE
T ss_pred             cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEE
Confidence                   0001112234778999998887653          25799999999888877642 23688999999997 55


Q ss_pred             EE-ecCCCceEeeecc
Q psy14961        280 SS-GSWDTTLRDEESK  294 (320)
Q Consensus       280 ~s-~s~D~~ir~~~~~  294 (320)
                      ++ ...++++-+.|.+
T Consensus       347 y~tn~~~~~VsViD~~  362 (386)
T 3sjl_D          347 YALSTGDKTLYIHDAE  362 (386)
T ss_dssp             EEEETTTTEEEEEETT
T ss_pred             EEEcCCCCeEEEEECC
Confidence            55 5568999999964

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.46  E-value=2.8e-11  Score=115.84  Aligned_cols=237  Identities=15%  Similarity=-0.005  Sum_probs=144.1

Q ss_pred             ceEEEEEcCCCCEEEEecCC-----CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe-------
Q psy14961         21 WVMACAYAPSGSVVASGGLD-----NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT-------   88 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~d-----g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~-------   88 (320)
                      .+.+.+|||||++|+.++.+     ..|++||+...+.    . ....+...+..+.|+++ +.|+.++.|+.       
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~----~-~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~  237 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP----L-ADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ  237 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE----E-EEEEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC----C-CccCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence            57789999999999887653     3588998753221    1 11111122346789999 88888776654       


Q ss_pred             -------EEEEECCCcc----eeeecccCccceeEEEEeeCCCCCEEEEEeCCC-----eEEEEeCCCCcEEEEeccCCc
Q psy14961         89 -------CALWDVESSQ----LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK-----LVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        89 -------v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~i~lwd~~~~~~~~~~~~~~~  152 (320)
                             |++|++.++.    ++.....+...+..+.+  +++|++|+..+.++     .|.+||+.++..         
T Consensus       238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~---------  306 (741)
T 1yr2_A          238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASV--SSDGRWVVITSSEGTDPVNTVHVARVTNGKI---------  306 (741)
T ss_dssp             -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE--CTTSCEEEEEEECTTCSCCEEEEEEEETTEE---------
T ss_pred             cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEE--CCCCCEEEEEEEccCCCcceEEEEECCCCCC---------
Confidence                   8899987765    22222222223444544  67888888776543     555555543310         


Q ss_pred             cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC----CCeEEEEECCCC--eeEeEEecCcceeeeE
Q psy14961        153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD----DATCRLFDLRAD--KEVACYKKDSILFGAT  226 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~----dg~i~iwd~~~~--~~~~~~~~~~~~~~~~  226 (320)
                                      .+...+..+...+... ++|+|+.|+..+.    ++.|.+||+.++  ...........  .+.
T Consensus       307 ----------------~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~--~l~  367 (741)
T 1yr2_A          307 ----------------GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD--NLE  367 (741)
T ss_dssp             ----------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS--EEE
T ss_pred             ----------------cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC--eEE
Confidence                            1012222333333334 3488888877765    456999998874  22222322222  234


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeec-CCCceeEEEECcCCCeEE----EecCCCceEeeecc
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMG-HENRVSCLQVSPDGTAFS----SGSWDTTLRDEESK  294 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~-h~~~i~~i~~s~~~~~l~----s~s~D~~ir~~~~~  294 (320)
                      .+.++ ++.++++...++..++|... .+.....+.. +...|..++++||++.|+    +....++|..|+..
T Consensus       368 ~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~  440 (741)
T 1yr2_A          368 SVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA  440 (741)
T ss_dssp             EEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred             EEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence            55666 56778888889987777432 3444444543 467789999999988766    45567889999854

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.43  E-value=9.9e-10  Score=92.59  Aligned_cols=224  Identities=7%  Similarity=0.027  Sum_probs=146.7

Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      +...+.++.+.+++..+++...++.|..||.. ++... ........+..+++  +++|...++...++.|..||.....
T Consensus        13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~g~~   89 (299)
T 2z2n_A           13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTI--SSDGEVWFTENAANKIGRITKKGII   89 (299)
T ss_dssp             SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEE--CTTSCEEEEETTTTEEEEECTTSCE
T ss_pred             cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEE--CCCCCEEEeCCCCCeEEEECCCCcE
Confidence            34567888888888776666567899999988 54432 12223345666655  5578777777768889999976321


Q ss_pred             EEEEeccC------------Cc-ccc--CCCeEEEEECcCCeeee-eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961        143 CVQSFEGH------------HN-LIT--DDKLVNIWDMRTGYCVQ-SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD  206 (320)
Q Consensus       143 ~~~~~~~~------------~~-~~~--~d~~i~iwd~~~~~~~~-~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd  206 (320)
                      ....+...            .. .+.  .++.|..||. ++.... ....+...+..++++|+|..+++...++.|..+|
T Consensus        90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~  168 (299)
T 2z2n_A           90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT  168 (299)
T ss_dssp             EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence            11111100            00 111  2456777777 443322 2233445689999999998888777788999999


Q ss_pred             CCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      . +++... +........+..++++++|.++++...++.|..||. ++.... ....+...+.+|+++++|+++++...+
T Consensus       169 ~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~  245 (299)
T 2z2n_A          169 E-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA  245 (299)
T ss_dssp             T-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred             C-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence            8 554332 222111223567889999997777767889999998 544332 223355678999999999988887778


Q ss_pred             CceEeeecc
Q psy14961        286 TTLRDEESK  294 (320)
Q Consensus       286 ~~ir~~~~~  294 (320)
                      +.|..++..
T Consensus       246 ~~i~~~d~~  254 (299)
T 2z2n_A          246 NKIGRLTSN  254 (299)
T ss_dssp             TEEEEEETT
T ss_pred             ceEEEECCC
Confidence            889988863

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.43  E-value=1.8e-10  Score=100.51  Aligned_cols=259  Identities=15%  Similarity=0.121  Sum_probs=165.1

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccccc-------
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATH-------   64 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h-------   64 (320)
                      .+-|..+.+....+.....+ . ++++|||++++.++          .++.|.+||.....    ...++...       
T Consensus        62 ~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~----v~~~I~v~~g~r~~~  135 (386)
T 3sjl_D           62 FVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL----PTADIELPDAPRFLV  135 (386)
T ss_dssp             EEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEEEEEETTCCCCCB
T ss_pred             EEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe----EEEEEECCCcccccc
Confidence            35577777877776655554 4 99999999887765          36789999875321    11122110       


Q ss_pred             ccCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-C
Q psy14961         65 TSFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT-G  141 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~-~  141 (320)
                      ...-..+.+++++++++++..  ++.|.++|+.+++.+..+....  .  ..+.|. ....+++.+.||.+.+.++.. +
T Consensus       136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~--~~~~P~-g~~~~~~~~~DG~~~~v~~~~~g  210 (386)
T 3sjl_D          136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C--YHIFPT-APDTFFMHCRDGSLAKVAFGTEG  210 (386)
T ss_dssp             SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEE-ETTEEEEEETTSCEEEEECCSSS
T ss_pred             CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c--ceeecC-CCceeEEECCCCCEEEEECCCCC
Confidence            112345788999999998874  6899999999999888775322  1  112222 235666777888888888765 4


Q ss_pred             cEEEEec--------------------cCCccccCCCeEEEEECcCCe--eeeeec---------C-CCCCeEEEEEcCC
Q psy14961        142 YCVQSFE--------------------GHHNLITDDKLVNIWDMRTGY--CVQSFE---------G-HQSDVNSVKFHPS  189 (320)
Q Consensus       142 ~~~~~~~--------------------~~~~~~~~d~~i~iwd~~~~~--~~~~~~---------~-~~~~v~~v~~~p~  189 (320)
                      +......                    ++...++.++.+.+.|+....  ....+.         + .......++++|+
T Consensus       211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~  290 (386)
T 3sjl_D          211 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA  290 (386)
T ss_dssp             CCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred             eEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence            4322110                    001123445677888876543  222221         0 1122335788999


Q ss_pred             CCEEEEeeC----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEE
Q psy14961        190 GDAVATGSD----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRV  257 (320)
Q Consensus       190 g~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~  257 (320)
                      ++.++....          .++|.+.|+.+.+.+..+....   .+.++.|++|++ +|++.. .+++|.++|..+++.+
T Consensus       291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~  367 (386)
T 3sjl_D          291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL  367 (386)
T ss_dssp             TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred             CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC---CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence            988876542          3579999999998877665432   346899999997 666654 5899999999999888


Q ss_pred             EEeecCCCceeEEEECcC
Q psy14961        258 NHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~  275 (320)
                      .++..-. .-+.|.+++|
T Consensus       368 ~~i~~~~-~p~~l~~s~d  384 (386)
T 3sjl_D          368 RSVNQLG-HGPQVITTAD  384 (386)
T ss_dssp             EEECCCC-SSCCEEEECC
T ss_pred             EEecCCC-CCceeEECCc
Confidence            7765322 2234555555

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.43  E-value=1.2e-10  Score=101.16  Aligned_cols=262  Identities=11%  Similarity=0.072  Sum_probs=154.8

Q ss_pred             cceEEEEEcCCCCEEEEec--CCCeEEEEEecccCCccccc----ccccccccCeEEEEecCCCCEEEEEeC-----CCe
Q psy14961         20 TWVMACAYAPSGSVVASGG--LDNKVTVYAIALEDDSSAKK----KTVATHTSFISCCIFPNSDQQILTGSG-----DCT   88 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~--~dg~i~v~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~s~~~-----dg~   88 (320)
                      .....++++++|+++++..  .++.++||.++ .. .....    .....|...+..+.+.+++..+++-..     ++.
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~   94 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK   94 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence            5778999999999888864  23436666664 11 11100    111234567888999887654444333     578


Q ss_pred             EEEEECCCcceeeecccC------ccceeEEEEeeCCCCCEEEEEe---CCCeEEEEeCCCCcEEEEeccCCcccc----
Q psy14961         89 CALWDVESSQLLQSFHGH------TGELMDLDLAPSETGNTFVSGS---SDKLVNIWDMRTGYCVQSFEGHHNLIT----  155 (320)
Q Consensus        89 v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~s~~---~dg~i~lwd~~~~~~~~~~~~~~~~~~----  155 (320)
                      |.+||+.+++.+..+...      ......+++.+. ++..+++-.   .++.|.+||+.+++..+.+.+|.....    
T Consensus        95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~-~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~  173 (343)
T 2qe8_A           95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLI-HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID  173 (343)
T ss_dssp             EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETT-TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred             EEEEECCCCeEEEEEECChhhcccccccceEEEecC-CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence            999999988866555321      223466666542 233344444   578999999998887766654322111    


Q ss_pred             --CCCe-EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC-eEEEEECC---CCe----e----EeEEecCc
Q psy14961        156 --DDKL-VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA-TCRLFDLR---ADK----E----VACYKKDS  220 (320)
Q Consensus       156 --~d~~-i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg-~i~iwd~~---~~~----~----~~~~~~~~  220 (320)
                        .++. +...+. .+.. ..   ....++.|+|+|+|+.|+.+..++ .+..++..   .+.    .    +...... 
T Consensus       174 ~~~~g~~~~~~~~-~g~~-~~---~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~-  247 (343)
T 2qe8_A          174 LVIDGVPVQIGQP-DGTV-IR---PHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK-  247 (343)
T ss_dssp             CEETTEECBEECT-TSCE-EC---CCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC-
T ss_pred             eeECCEEEEeccC-CCce-ec---eecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC-
Confidence              1111 110110 0100 00   112468899999999888877665 44444421   110    0    0000000 


Q ss_pred             ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        221 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                        .....++++++|.++++...++.|..||...+....... .+...+.+++|.++++++++.+....+.++.
T Consensus       248 --g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          248 --PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             --CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred             --CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence              023457899999999998899999999984444322222 2245689999999999988887665554443

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.42  E-value=9.5e-12  Score=108.88  Aligned_cols=180  Identities=18%  Similarity=0.123  Sum_probs=127.2

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC-----cc-cccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD-----SS-AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~-----~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      +...++.+++++...++++|+.++ +.+|++..-..     .. ........+.. |..+.|  ++..|+++ .++.|++
T Consensus        36 ~~~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v  110 (388)
T 1xip_A           36 PFASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS  110 (388)
T ss_dssp             CSSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred             CcccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence            444688999999999999999875 66798642110     00 01111223455 999999  78888888 8899999


Q ss_pred             EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      ||+.+.......+.|..++.++.+.+    ..+++++.||.|.+||+..+....                          
T Consensus       111 ~dv~sl~~~~~~~~~~~~v~~i~~~~----p~~av~~~dG~L~v~dl~~~~~~~--------------------------  160 (388)
T 1xip_A          111 LDLEELSEFRTVTSFEKPVFQLKNVN----NTLVILNSVNDLSALDLRTKSTKQ--------------------------  160 (388)
T ss_dssp             EESSSTTCEEEEEECSSCEEEEEECS----SEEEEEETTSEEEEEETTTCCEEE--------------------------
T ss_pred             EEchhhhccCccceeecceeeEEecC----CCEEEEECCCCEEEEEccCCcccc--------------------------
Confidence            99977655555556677777665432    238889999999999998664321                          


Q ss_pred             eeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee--EeEEecC-------cceeeeEEEEEecCCcEEEE
Q psy14961        172 QSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE--VACYKKD-------SILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~-------~~~~~~~~~~~s~~~~~l~~  239 (320)
                           +...|.|++|||+|  ++.|..||++++|+....+.  ...+...       .....+.++.|.+++.++++
T Consensus       161 -----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          161 -----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             -----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             -----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence                 22368999999999  77899999999998877653  3334211       01245788999999988876

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.42  E-value=1.9e-10  Score=99.25  Aligned_cols=231  Identities=7%  Similarity=-0.048  Sum_probs=139.8

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc-----cCeEEEEecC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-----SFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~   75 (320)
                      |.+||..+.+....+.. ......+++++++++.++...++.|.+||.....    ....+....     .....+.+  
T Consensus        66 v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~----~~~~i~~g~~~~~~~~p~~i~~--  138 (328)
T 3dsm_A           66 IFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE----ITGYIECPDMDMESGSTEQMVQ--  138 (328)
T ss_dssp             EEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE----EEEEEECTTCCTTTCBCCCEEE--
T ss_pred             EEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe----EEEEEEcCCccccCCCcceEEE--
Confidence            35788888887766643 3456789999998655555478999999875321    111111111     12233444  


Q ss_pred             CCCEEEEEe--CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC----------CeEEEEeCCCCcE
Q psy14961         76 SDQQILTGS--GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----------KLVNIWDMRTGYC  143 (320)
Q Consensus        76 ~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----------g~i~lwd~~~~~~  143 (320)
                      +++.++.++  .++.|.++|+.+++.+..+.... ....+.+  +++|++++++..+          +.|.++|..+++.
T Consensus       139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~--~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v  215 (328)
T 3dsm_A          139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVM--DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV  215 (328)
T ss_dssp             ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEE--CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred             ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEE--cCCCCEEEEECCCccCCccccCCceEEEEECCCCeE
Confidence            355666665  48899999999988777665322 2334444  4567655555433          4566666555443


Q ss_pred             EEEeccCCccccCCCeEEEEECcCCeeeeeecCC-CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961        144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH-QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL  222 (320)
Q Consensus       144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~  222 (320)
                                                 ...+.-. ......++++|+++.|+.+..  .|.+||..+++...........
T Consensus       216 ---------------------------~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~  266 (328)
T 3dsm_A          216 ---------------------------EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRD  266 (328)
T ss_dssp             ---------------------------EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCS
T ss_pred             ---------------------------EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCC
Confidence                                       2222211 125688999999998887765  8999999876642110000001


Q ss_pred             eeeEEEEEec-CCcEEEEE----eCCCeEEEEcCCCCeEEEEeecCCCceeEEEE
Q psy14961        223 FGATSVDFSV-SGRLLFAG----YNDYTINVWDSLKCCRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       223 ~~~~~~~~s~-~~~~l~~g----~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~  272 (320)
                      ..+..++++| ++.+.++.    ..++.|.+||.. ++.+.++.. ...-..++|
T Consensus       267 ~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~  319 (328)
T 3dsm_A          267 TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW  319 (328)
T ss_dssp             SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred             CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence            2356789999 55565665    568899999987 766666542 222345555

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.41  E-value=1.3e-10  Score=102.96  Aligned_cols=259  Identities=10%  Similarity=-0.011  Sum_probs=168.6

Q ss_pred             CCCCEEEEecCC-----CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEEEEE
Q psy14961         29 PSGSVVASGGLD-----NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCALWD   93 (320)
Q Consensus        29 ~~~~~l~s~~~d-----g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd   93 (320)
                      ++++.++.....     +.|.++|....    ....++..-..+  .+.++++++.++++.          .++.|.++|
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~----~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD  155 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTG----RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD  155 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTT----EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCC----EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence            466655555432     68999987532    222233222233  688999999988876          467999999


Q ss_pred             CCCcceeeecccC-------ccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCC------------c
Q psy14961         94 VESSQLLQSFHGH-------TGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHH------------N  152 (320)
Q Consensus        94 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~------------~  152 (320)
                      ..+++.+..+...       ......+.+  +++|++++.+..  ++.|.+.|+.+++.+..+.-..            .
T Consensus       156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~--spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v  233 (426)
T 3c75_H          156 PVTFLPIADIELPDAPRFLVGTYQWMNAL--TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFY  233 (426)
T ss_dssp             TTTCCEEEEEEETTCCCCCBSCCGGGSEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEE
T ss_pred             CCCCcEEEEEECCCccccccCCCcceEEE--cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEE
Confidence            9999887766421       112233444  668999998874  5789999999998877664311            1


Q ss_pred             cccCCCeEEEEECcCCeeeee----ecCCCCCe-EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe--EEec---Cc--
Q psy14961        153 LITDDKLVNIWDMRTGYCVQS----FEGHQSDV-NSVKFHPSGDAVATGSDDATCRLFDLRADKEVA--CYKK---DS--  220 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~~~~~~~----~~~~~~~v-~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~--~~~~---~~--  220 (320)
                      ..+.++.+.+.+..+++....    +.....++ ..+.+.+++..++..+..+.+.+.|........  .+..   ..  
T Consensus       234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~  313 (426)
T 3c75_H          234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA  313 (426)
T ss_dssp             EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred             EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence            234677777777755543321    11111121 245789998888777788999999986543211  1110   00  


Q ss_pred             ---ceeeeEEEEEecCCcEEEEEeC----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEec-CC
Q psy14961        221 ---ILFGATSVDFSVSGRLLFAGYN----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGS-WD  285 (320)
Q Consensus       221 ---~~~~~~~~~~s~~~~~l~~g~~----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s-~D  285 (320)
                         ...+...++++|+++.+++...          ++.|.+.|..+.+.+.++... ....+|+|+|||+ +++++. .+
T Consensus       314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s  392 (426)
T 3c75_H          314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGT  392 (426)
T ss_dssp             GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTT
T ss_pred             cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCC
Confidence               0111123689999987777642          357999999998888777522 2478999999999 888777 59


Q ss_pred             CceEeeecchH
Q psy14961        286 TTLRDEESKNR  296 (320)
Q Consensus       286 ~~ir~~~~~~~  296 (320)
                      +++.+.|....
T Consensus       393 ~~VsVID~~t~  403 (426)
T 3c75_H          393 QTLHIYDAATG  403 (426)
T ss_dssp             TEEEEEETTTC
T ss_pred             CeEEEEECCCC
Confidence            99999997543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.40  E-value=1.2e-10  Score=97.03  Aligned_cols=198  Identities=10%  Similarity=0.042  Sum_probs=130.8

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ..+.+++++++|+++++.. ++.|.+|+......     ..+. ........+.+.+++..+++...++.|.+|+..+..
T Consensus        67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~  140 (270)
T 1rwi_B           67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-----TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT  140 (270)
T ss_dssp             CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-----EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS
T ss_pred             CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-----eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce
Confidence            4567899999999777666 88899997642211     1111 222456788888888766666678899999865544


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ  178 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~  178 (320)
                      ..............+++  +++|+.+++...++.|.+||.........                           ...+.
T Consensus       141 ~~~~~~~~~~~p~~i~~--~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---------------------------~~~~~  191 (270)
T 1rwi_B          141 QTVLPFTGLNDPDGVAV--DNSGNVYVTDTDNNRVVKLEAESNNQVVL---------------------------PFTDI  191 (270)
T ss_dssp             CEECCCCSCCSCCCEEE--CTTCCEEEEEGGGTEEEEECTTTCCEEEC---------------------------CCSSC
T ss_pred             eEeeccccCCCceeEEE--eCCCCEEEEECCCCEEEEEecCCCceEee---------------------------cccCC
Confidence            33222222234555665  45677666666678899998765432110                           01122


Q ss_pred             CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..+.+++++|+|..+++...++.|.+||........ .... ....+..++++++|+++++...++.|.+++....
T Consensus       192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFT-GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH  265 (270)
T ss_dssp             CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCC-SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred             CCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccC-CCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence            457889999999877887788999999987543322 1111 1123578899999998888888999999987543

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.39  E-value=1.1e-10  Score=111.84  Aligned_cols=244  Identities=10%  Similarity=0.013  Sum_probs=142.6

Q ss_pred             cCCCCEEEEecCCCe---EEEEEeccc---CCccccc---ccc-cccccCeEEEEecCCCCEEEEEeCC-----CeEEEE
Q psy14961         28 APSGSVVASGGLDNK---VTVYAIALE---DDSSAKK---KTV-ATHTSFISCCIFPNSDQQILTGSGD-----CTCALW   92 (320)
Q Consensus        28 ~~~~~~l~s~~~dg~---i~v~~~~~~---~~~~~~~---~~~-~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iw   92 (320)
                      +|+|++++....++.   -.+|..+..   .......   ..+ ..|...+....|+|++++|+.++.+     ..|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            389998887665443   556665432   1111110   011 1233467788999999998876543     469999


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe---
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY---  169 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~---  169 (320)
                      |+.+++.+.. ..+...+..++|  +++ +.|+.++.++...     .+.    .    ........|++|++.++.   
T Consensus       195 dl~tg~~~~~-~~~~~~~~~~~w--spD-~~l~~~~~~~~~~-----~~~----~----~~~~~~~~v~~~~lgt~~~~~  257 (741)
T 1yr2_A          195 GVADGKPLAD-ELKWVKFSGLAW--LGN-DALLYSRFAEPKE-----GQA----F----QALNYNQTVWLHRLGTPQSAD  257 (741)
T ss_dssp             ETTTCCEEEE-EEEEEESCCCEE--STT-SEEEEEECCCC---------------------CCCCCEEEEEETTSCGGGC
T ss_pred             ECCCCCCCCc-cCCCceeccEEE--ECC-CEEEEEEecCccc-----ccc----c----ccCCCCCEEEEEECCCCchhC
Confidence            9999887543 111112234555  556 7788777665310     000    0    000112345566654433   


Q ss_pred             -eeeeecCCCCCeEEEEEcCCCCEEEEeeCC-----CeEEEEECCCC--e-eEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        170 -CVQSFEGHQSDVNSVKFHPSGDAVATGSDD-----ATCRLFDLRAD--K-EVACYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       170 -~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d-----g~i~iwd~~~~--~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                       .+.....+...+.++.|+|+|++|+..+.+     ..|.+||+.++  + ..........   .... ++|+|..|+..
T Consensus       258 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~-~~~dg~~l~~~  333 (741)
T 1yr2_A          258 QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA---QWDF-VDGVGDQLWFV  333 (741)
T ss_dssp             EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS---CEEE-EEEETTEEEEE
T ss_pred             EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc---eEEE-EeccCCEEEEE
Confidence             222233344458899999999998877644     38999999776  3 2222222211   1222 45899988887


Q ss_pred             eC----CCeEEEEcCCCC-eEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        241 YN----DYTINVWDSLKC-CRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       241 ~~----dg~v~~wd~~~~-~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ++    ++.|.+||.... .....+. .+...+..++|+ ++.++++...|+..++|..
T Consensus       334 s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~  391 (741)
T 1yr2_A          334 SGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF  391 (741)
T ss_dssp             ECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred             ECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence            75    456999998764 2333343 445567788887 6778999999999888764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.39  E-value=1.8e-09  Score=91.68  Aligned_cols=236  Identities=9%  Similarity=0.001  Sum_probs=139.3

Q ss_pred             ceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961         21 WVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL   99 (320)
Q Consensus        21 ~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~   99 (320)
                      .--+..|+++ +.++++...++.|..|+......     . .......+.++.+.+++++++ +. ++.|.+||.++++.
T Consensus        14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-----~-~~~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~   85 (297)
T 3g4e_A           14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-----Q-RVTMDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSA   85 (297)
T ss_dssp             BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-----E-EEECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEE
T ss_pred             cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-----E-EEeCCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcE
Confidence            3346788985 45666667788999998743211     1 112345688899999888444 44 56899999987764


Q ss_pred             eeecccC----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961        100 LQSFHGH----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus       100 ~~~~~~~----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      .......    ...+..+.+  +++|++.++...+...    .            .......+.+..++.. +... .+.
T Consensus        86 ~~~~~~~~~~~~~~~~di~~--d~dG~l~~~~~~~~~~----~------------~~~~~~~~~l~~~d~~-g~~~-~~~  145 (297)
T 3g4e_A           86 VVLATVDNDKKNNRFNDGKV--DPAGRYFAGTMAEETA----P------------AVLERHQGALYSLFPD-HHVK-KYF  145 (297)
T ss_dssp             EEEEECCTTCSSEEEEEEEE--CTTSCEEEEEEECCSB----T------------TBCCTTCEEEEEECTT-SCEE-EEE
T ss_pred             EEEEecCCCCCCCCCCCEEE--CCCCCEEEecCCcccc----c------------ccccCCCcEEEEEECC-CCEE-EEe
Confidence            3222111    122344444  5677755543221100    0            0000001111111111 1111 111


Q ss_pred             CCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECC--CCeeE--eEEec-CcceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961        176 GHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLR--ADKEV--ACYKK-DSILFGATSVDFSVSGRLLFAGYNDYTINVW  249 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~--~~~~~--~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~w  249 (320)
                      .+....+.++|+|+++.| ++.+.++.|..||+.  ++...  ..+.. ......+..++++++|.+.++....+.|..|
T Consensus       146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~  225 (297)
T 3g4e_A          146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL  225 (297)
T ss_dssp             EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE
T ss_pred             eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE
Confidence            122345789999999876 455668899999874  44321  11111 1111234678899999988888888999999


Q ss_pred             cCCCCeEEEEeecCCCceeEEEEC-cCCCeEEEecC
Q psy14961        250 DSLKCCRVNHLMGHENRVSCLQVS-PDGTAFSSGSW  284 (320)
Q Consensus       250 d~~~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s~s~  284 (320)
                      |..+++.+..+..+...+++++|. ||++.|..++.
T Consensus       226 d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          226 DPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             CTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             cCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence            988788888787777789999998 88876655554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.38  E-value=3.5e-11  Score=105.29  Aligned_cols=170  Identities=11%  Similarity=0.047  Sum_probs=122.8

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----------eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEE
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNI  135 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~l  135 (320)
                      .+..+++++....+++|+.+ .+.+|++...+           ..... .+.. |..++|    +++.|+++ .++.|++
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f----d~~~L~v~-~~~~l~v  110 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF----HGDQVLVS-TRNALYS  110 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE----ETTEEEEE-ESSEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE----CCCEEEEE-cCCcEEE
Confidence            57788888888999999987 56669865432           11112 2445 887877    57888888 8899999


Q ss_pred             EeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961        136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       136 wd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      ||+.+......                           ...|..++.++.+.+.  .++++..||.+.+||+..+.... 
T Consensus       111 ~dv~sl~~~~~---------------------------~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-  160 (388)
T 1xip_A          111 LDLEELSEFRT---------------------------VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-  160 (388)
T ss_dssp             EESSSTTCEEE---------------------------EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-
T ss_pred             EEchhhhccCc---------------------------cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-
Confidence            99876432211                           1223445666666543  38889999999999998766532 


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE--EEEe------e---cCCCceeEEEECcCCCeEEE
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR--VNHL------M---GHENRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~--~~~~------~---~h~~~i~~i~~s~~~~~l~s  281 (320)
                           ....+++++|||+|  ++.|..||++++|+......  ..++      .   +|...|.+|.|.+++.+|++
T Consensus       161 -----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          161 -----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             -----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             -----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence                 12357899999999  67899999999998665543  4444      2   47889999999999998887

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.36  E-value=1.1e-09  Score=93.21  Aligned_cols=244  Identities=12%  Similarity=0.039  Sum_probs=141.9

Q ss_pred             EEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         15 VTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      +.....+.....|+|+|+ ++++...++.|..|+..  ..    ...+..+...+..+.+.++++.+++...++.|..|+
T Consensus        40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~--g~----~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~  113 (305)
T 3dr2_A           40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED--GT----VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD  113 (305)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT--SC----EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC--CC----EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence            333445667889999998 66777778899999752  11    123334456678889998887665555568899999


Q ss_pred             CCCcceeeecccCc----cceeEEEEeeCCCCCEEEE----EeCCCeEEEEeCCCCcEEEEeccCCc-cccCCCeEEEEE
Q psy14961         94 VESSQLLQSFHGHT----GELMDLDLAPSETGNTFVS----GSSDKLVNIWDMRTGYCVQSFEGHHN-LITDDKLVNIWD  164 (320)
Q Consensus        94 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~s----~~~dg~i~lwd~~~~~~~~~~~~~~~-~~~~d~~i~iwd  164 (320)
                      .+ ++.........    ..+..+.+  +++|+..++    |..+.               ..+... .....+.|..+|
T Consensus       114 ~~-g~~~~~~~~~~~~~~~~~~~i~~--d~dG~l~~td~~~g~~~~---------------~~~~~~~~~~~~~~v~~~d  175 (305)
T 3dr2_A          114 AD-GQAHLLVGRYAGKRLNSPNDLIV--ARDGAIWFTDPPFGLRKP---------------SQGCPADPELAHHSVYRLP  175 (305)
T ss_dssp             TT-SCEEEEECEETTEECSCCCCEEE--CTTSCEEEECCSGGGSCG---------------GGSCCCCCSSSCEEEEEEC
T ss_pred             CC-CCEEEEEeccCCCccCCCCCEEE--CCCCCEEEeCcCCCcccc---------------ccccccccccCCCeEEEEc
Confidence            76 44322111101    12233443  445665554    22110               000000 000122344444


Q ss_pred             CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC------CeEEEEECCCCeeEeE---EecCcceeeeEEEEEecCCc
Q psy14961        165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD------ATCRLFDLRADKEVAC---YKKDSILFGATSVDFSVSGR  235 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d------g~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~  235 (320)
                      ..+++.....  .....+.++|+|+++.|+.+...      +.|..|++..+. +..   +... ....+..+.++++|+
T Consensus       176 ~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-~~~~pdgi~~d~~G~  251 (305)
T 3dr2_A          176 PDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-PDGLPDGFCVDRGGW  251 (305)
T ss_dssp             SSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-SSSCCCSEEECTTSC
T ss_pred             CCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-CCCCCCeEEECCCCC
Confidence            4443322221  22346789999999987766554      789999987654 211   1110 011124577899999


Q ss_pred             EEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      +.++ ..+ .|.+|+. .+..+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus       252 lwv~-~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          252 LWSS-SGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             EEEC-CSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred             EEEe-cCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence            5444 444 4999997 455555555444 5899999999988888877776554

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.32  E-value=6.3e-10  Score=98.68  Aligned_cols=245  Identities=13%  Similarity=0.084  Sum_probs=157.0

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCcccccccccc-------c
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVAT-------H   64 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~-------h   64 (320)
                      .+.|..+.+....+.....+  .++++|||++|+.+.          .++.|.++|.....    ...++..       .
T Consensus       102 sVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~----vv~~I~v~g~~r~~~  175 (426)
T 3c75_H          102 FVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL----PIADIELPDAPRFLV  175 (426)
T ss_dssp             EEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEEEEEETTCCCCCB
T ss_pred             EEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc----EEEEEECCCcccccc
Confidence            36678888888777766666  899999999888776          36789999874321    1111110       0


Q ss_pred             ccCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         65 TSFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      ...-..+.+++++++++++..  ++.|.+.|+.+++.+..+.....    ..+.|.. ...+++.+.||.+.+.++.+++
T Consensus       176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g-~~~~v~~~~dG~~~~V~~~~~~  250 (426)
T 3c75_H          176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPAS-PTVFYMNCRDGSLARVDFADGE  250 (426)
T ss_dssp             SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEE-TTEEEEEETTSSEEEEECCTTC
T ss_pred             CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCC-CcEEEEEcCCCCEEEEECCCCc
Confidence            111234678999999999875  57999999999988877663221    1222221 2455666677777766765444


Q ss_pred             EEEE----ec-------------cC--C-ccccCCCeEEEEECcCCeee--eeecC----------CCCCeEEEEEcCCC
Q psy14961        143 CVQS----FE-------------GH--H-NLITDDKLVNIWDMRTGYCV--QSFEG----------HQSDVNSVKFHPSG  190 (320)
Q Consensus       143 ~~~~----~~-------------~~--~-~~~~~d~~i~iwd~~~~~~~--~~~~~----------~~~~v~~v~~~p~g  190 (320)
                      ....    +.             ..  . ..+...+.+.+.|+......  ..+.-          .......++++|++
T Consensus       251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg  330 (426)
T 3c75_H          251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS  330 (426)
T ss_dssp             CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG
T ss_pred             EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC
Confidence            3321    10             00  0 01123466777777543211  11100          01112237899998


Q ss_pred             CEEEEeeC----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEE
Q psy14961        191 DAVATGSD----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVN  258 (320)
Q Consensus       191 ~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~  258 (320)
                      +.++....          ++.|.++|..+.+.+..++-..   ....+.|+|||+ ++++.. .++.|.++|+.+.+.+.
T Consensus       331 ~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~  407 (426)
T 3c75_H          331 DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR  407 (426)
T ss_dssp             TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence            87766532          3579999999998877664332   356889999999 888887 58999999999998887


Q ss_pred             Ee
Q psy14961        259 HL  260 (320)
Q Consensus       259 ~~  260 (320)
                      ++
T Consensus       408 tI  409 (426)
T 3c75_H          408 SV  409 (426)
T ss_dssp             EE
T ss_pred             Ee
Confidence            76

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.31  E-value=1.5e-08  Score=85.27  Aligned_cols=223  Identities=9%  Similarity=0.042  Sum_probs=144.6

Q ss_pred             ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      .....++.+.+++..+++...++.|.+||.. ++... .+......+..+++  +++|+..++...++.|..+|.. +..
T Consensus        19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIV--SSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEE--CCCCCEEEEecCCCeEEEECCC-CCe
Confidence            3456788888888777766678999999987 54432 22222244555554  5667777776667889999987 543


Q ss_pred             EE-EeccCC------------c-ccc--CCCeEEEEECcCCeee-eeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961        144 VQ-SFEGHH------------N-LIT--DDKLVNIWDMRTGYCV-QSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD  206 (320)
Q Consensus       144 ~~-~~~~~~------------~-~~~--~d~~i~iwd~~~~~~~-~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd  206 (320)
                      .. ......            . .+.  .++.|..+|.. ++.. ..+......+..++++|+|+.+++...++.|..+|
T Consensus        95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~  173 (300)
T 2qc5_A           95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT  173 (300)
T ss_dssp             EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred             EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence            21 111000            0 011  14566677765 4333 22333445688999999999777777788999999


Q ss_pred             CCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      . .++... +........+..+.++++|.+.++....+.|..||. .+.... .+..+...+.+|+++++|+++++...+
T Consensus       174 ~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~  250 (300)
T 2qc5_A          174 N-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA  250 (300)
T ss_dssp             T-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred             C-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence            8 444332 322211223567889999987777767788999997 333332 233345678999999999988887777


Q ss_pred             CceEeeecch
Q psy14961        286 TTLRDEESKN  295 (320)
Q Consensus       286 ~~ir~~~~~~  295 (320)
                      +.|..++...
T Consensus       251 ~~i~~~~~~g  260 (300)
T 2qc5_A          251 NQIGRITNDN  260 (300)
T ss_dssp             TEEEEECTTS
T ss_pred             CeEEEECCCC
Confidence            8898888643

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.31  E-value=1.1e-08  Score=88.05  Aligned_cols=222  Identities=14%  Similarity=0.105  Sum_probs=133.9

Q ss_pred             eEEEEEcCCC-CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961         22 VMACAYAPSG-SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL  100 (320)
Q Consensus        22 V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  100 (320)
                      .-+..|+|++ .++++...++.|..|+.....     ...+ .....+.++.+.+++.++++ +.+ .|.+||..+++..
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~-----~~~~-~~~~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~  122 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGR-----KTVH-ALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLT  122 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE-----EEEE-ECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEE
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc-----EEEE-ECCCcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEE
Confidence            4577899975 456666677889999864211     1111 12356888888888766554 444 4999998877653


Q ss_pred             eeccc---C-ccceeEEEEeeCCCCCEEEEEeCC------CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961        101 QSFHG---H-TGELMDLDLAPSETGNTFVSGSSD------KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus       101 ~~~~~---~-~~~v~~~~~~~~~~~~~l~s~~~d------g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      .....   . ...+..+.+  +++|+++++...+      +.|..+|  +++                           .
T Consensus       123 ~~~~~~~~~~~~~~~~i~~--d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~---------------------------~  171 (326)
T 2ghs_A          123 LHAELESDLPGNRSNDGRM--HPSGALWIGTMGRKAETGAGSIYHVA--KGK---------------------------V  171 (326)
T ss_dssp             EEECSSTTCTTEEEEEEEE--CTTSCEEEEEEETTCCTTCEEEEEEE--TTE---------------------------E
T ss_pred             EEeeCCCCCCCCCCCCEEE--CCCCCEEEEeCCCcCCCCceEEEEEe--CCc---------------------------E
Confidence            22111   1 123444544  5567765544321      2233333  221                           1


Q ss_pred             eeeecCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECC--CC-eeE--eEEec-CcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        171 VQSFEGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLR--AD-KEV--ACYKK-DSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~--~~-~~~--~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      .. +..+....+.++|+|+|+.++ +.+.++.|.+||+.  ++ +..  ..+.. ......+..+.++++|.++++...+
T Consensus       172 ~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~  250 (326)
T 2ghs_A          172 TK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE  250 (326)
T ss_dssp             EE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred             EE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence            11 111122457899999998764 44567899999986  44 211  11111 1111124568899999988877777


Q ss_pred             CeEEEEcCCCCeEEEEeecCCCceeEEEEC-cCCCeEEEecC
Q psy14961        244 YTINVWDSLKCCRVNHLMGHENRVSCLQVS-PDGTAFSSGSW  284 (320)
Q Consensus       244 g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s~s~  284 (320)
                      +.|..||. .+..+..+..+...+++++|+ |+++.|..++.
T Consensus       251 ~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          251 GAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             TEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence            89999997 456666676677789999998 88876655443

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.29  E-value=1.2e-09  Score=103.86  Aligned_cols=233  Identities=12%  Similarity=0.071  Sum_probs=135.8

Q ss_pred             ceEEEEEcCCCCEEEEe-----cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC--------
Q psy14961         21 WVMACAYAPSGSVVASG-----GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC--------   87 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~-----~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--------   87 (320)
                      .+.+++|||||++||.+     +....|+++|+...+.   ....+..  .....+.|+ +++.|+.++.+.        
T Consensus       130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~---~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP---LETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE---EEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC---CccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            57788999999998853     3335788888854221   1111111  112456788 898888887764        


Q ss_pred             -----eEEEEECCCcce----eeeccc-CccceeEEEEeeCCCCCEEEEEeC----CCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         88 -----TCALWDVESSQL----LQSFHG-HTGELMDLDLAPSETGNTFVSGSS----DKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        88 -----~v~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~----dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                           .|++|++.+...    +..... +......+  ..+++|++|+....    +..|.++|+.++..          
T Consensus       204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~--~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~----------  271 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGA--TVTEDDRFLLISAANSTSGNRLYVKDLSQENA----------  271 (693)
T ss_dssp             -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEE--EECTTSCEEEEEEESSSSCCEEEEEETTSTTC----------
T ss_pred             cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEE--EEcCCCCEEEEEEccCCCCcEEEEEECCCCCC----------
Confidence                 499999877542    222222 22233344  44677887754332    23666777654320          


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eC---CCeEEEEECCCCee--EeEEecCcceeeeEE
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SD---DATCRLFDLRADKE--VACYKKDSILFGATS  227 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~---dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~  227 (320)
                                      ....+..+....... ++++|+.|+.. ..   .+.|..+|+.++..  ...+..+..  ... 
T Consensus       272 ----------------~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~-  331 (693)
T 3iuj_A          272 ----------------PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ--QVL-  331 (693)
T ss_dssp             ----------------CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS--SCE-
T ss_pred             ----------------ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC--CEE-
Confidence                            111222233333333 56666665443 33   36799999987543  122222221  112 


Q ss_pred             EEEecCCcEEEEEeC-CC--eEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCC----CceEeeec
Q psy14961        228 VDFSVSGRLLFAGYN-DY--TINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWD----TTLRDEES  293 (320)
Q Consensus       228 ~~~s~~~~~l~~g~~-dg--~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~~~  293 (320)
                       .|++++..|+.... ++  .|.+||..... ...+ .++...+..+.++|+++.|+....+    +++..++.
T Consensus       332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~  403 (693)
T 3iuj_A          332 -TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP  403 (693)
T ss_dssp             -EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred             -EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence             78999998877764 43  68889876443 3333 2445678888899988876655443    67777775

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.25  E-value=7e-08  Score=84.46  Aligned_cols=243  Identities=12%  Similarity=0.020  Sum_probs=151.3

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      ++..|+.++.++.+..+|........    ..............  .+..++.++.++.+..+|..+++.+..+......
T Consensus       102 ~~~~v~v~~~~g~l~a~d~~tG~~~W----~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~  175 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVYALNTSDGTVAW----QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS  175 (376)
T ss_dssp             ETTEEEEEETTSEEEEEETTTCCEEE----EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC--
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEE----EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc
Confidence            44577778888999999875322111    11111111111111  1457888889999999999999887765532211


Q ss_pred             e-----eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---------------Ccc---------ccCCCeE
Q psy14961        110 L-----MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---------------HNL---------ITDDKLV  160 (320)
Q Consensus       110 v-----~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---------------~~~---------~~~d~~i  160 (320)
                      .     ....+    .+..++.++.++.+..+|..+++.+......               ...         .+.++.+
T Consensus       176 ~~~~~~~~~~~----~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l  251 (376)
T 3q7m_A          176 LSLRGESAPTT----AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL  251 (376)
T ss_dssp             ---CCCCCCEE----ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred             eeecCCCCcEE----ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence            1     11111    1357888889999999999998876554321               000         1246778


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-cceeeeEEEEEecCCcEEEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-SILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~  239 (320)
                      ..+|.++++.......  .....+...  +..++.++.++.+..+|..+++.+-..... ....  .....  .+..|+.
T Consensus       252 ~~~d~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~--~~~~~--~~~~l~v  323 (376)
T 3q7m_A          252 TALDLRSGQIMWKREL--GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLL--TSPVL--YNGNLVV  323 (376)
T ss_dssp             EEEETTTCCEEEEECC--CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCC--CCCEE--ETTEEEE
T ss_pred             EEEECCCCcEEeeccC--CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcc--cCCEE--ECCEEEE
Confidence            8899988887655432  234444443  667888888999999999988876444311 1111  11112  3567888


Q ss_pred             EeCCCeEEEEcCCCCeEEEEeecCCCceeE-EEECcCCCeEEEecCCCceEeee
Q psy14961        240 GYNDYTINVWDSLKCCRVNHLMGHENRVSC-LQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~-i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      ++.+|.+..+|..+++.+.........+.. ... . +..|+.++.|+.+..++
T Consensus       324 ~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~-~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          324 GDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-A-DGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-E-TTEEEEEBTTSCEEEEE
T ss_pred             EeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE-E-CCEEEEEeCCCEEEEEe
Confidence            899999999999888877665543333322 222 2 34677788899988775

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.21  E-value=2.9e-09  Score=92.77  Aligned_cols=238  Identities=7%  Similarity=-0.098  Sum_probs=150.0

Q ss_pred             eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEEEEECCCcceeeecccCc----
Q psy14961         42 KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCALWDVESSQLLQSFHGHT----  107 (320)
Q Consensus        42 ~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~----  107 (320)
                      .+.++|.+..    ....++..-..+  .+.+++++++++++.          .++.|.+||+.+++.+..+....    
T Consensus        47 ~vsvID~~t~----~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~  120 (368)
T 1mda_H           47 ENWVSCAGCG----VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF  120 (368)
T ss_dssp             EEEEEETTTT----EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred             eEEEEECCCC----eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc
Confidence            7778886422    222333322334  688999999998886          37899999999999888875431    


Q ss_pred             ---cceeEEEEeeCCCCCEEEEEeC--CCeEEE--EeCCCCcEEEEec----------cCC--ccccCCCeEEEEECcC-
Q psy14961        108 ---GELMDLDLAPSETGNTFVSGSS--DKLVNI--WDMRTGYCVQSFE----------GHH--NLITDDKLVNIWDMRT-  167 (320)
Q Consensus       108 ---~~v~~~~~~~~~~~~~l~s~~~--dg~i~l--wd~~~~~~~~~~~----------~~~--~~~~~d~~i~iwd~~~-  167 (320)
                         .....+.+  +++|++++.+..  +..+.+  +|..+   +..+.          +..  ...+.++.+.+.|+.+ 
T Consensus       121 ~~g~~P~~ia~--SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~  195 (368)
T 1mda_H          121 SVGPRVHIIGN--CASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAA  195 (368)
T ss_dssp             CBSCCTTSEEE--CTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred             ccCCCcceEEE--cCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccc
Confidence               12334555  567989998875  457888  99876   23221          111  1224567777778776 


Q ss_pred             ----Ceeee----eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe--eEeEEecC-------c-ceeeeEEEE
Q psy14961        168 ----GYCVQ----SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK--EVACYKKD-------S-ILFGATSVD  229 (320)
Q Consensus       168 ----~~~~~----~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~-------~-~~~~~~~~~  229 (320)
                          ++...    .+.-...+.   . .+++..++..+. +.+.+.|+....  .+..+...       . ...+...+.
T Consensus       196 ~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~  270 (368)
T 1mda_H          196 PAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA  270 (368)
T ss_dssp             CCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred             cccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence                33221    111112233   3 666676666666 899999986532  11111110       0 001112267


Q ss_pred             EecCCcEEEEEeC-C--------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEec-CCCceEeeecchH
Q psy14961        230 FSVSGRLLFAGYN-D--------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGS-WDTTLRDEESKNR  296 (320)
Q Consensus       230 ~s~~~~~l~~g~~-d--------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s-~D~~ir~~~~~~~  296 (320)
                      |+|+++.++++.. .        +.+.++|+.+.+.+.++.... ...+|+|+|||+ ++++.. .++++.++|.+..
T Consensus       271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~  347 (368)
T 1mda_H          271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD  347 (368)
T ss_dssp             EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred             EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence            9999998887643 2        356699999988887765333 588999999998 567776 5999999997543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.20  E-value=8.3e-11  Score=103.17  Aligned_cols=190  Identities=9%  Similarity=0.015  Sum_probs=109.3

Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC----
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH----  151 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~----  151 (320)
                      ++..+++++.||.|..||..+++.+..+..  +.+.+..+  ..++..+++++.|+.|..||..+|+.+..+..+.    
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~--~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~   83 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPT--HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV   83 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecce--EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence            467899999999999999999999887765  44433222  2345677778899999999998887654442210    


Q ss_pred             --c-c---------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC
Q psy14961        152 --N-L---------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD  219 (320)
Q Consensus       152 --~-~---------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~  219 (320)
                        . .         .+.++.+..||.++++.+..+..+.    ...++|++..+++++.|+.++.||.++++.+-.+...
T Consensus        84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~  159 (369)
T 2hz6_A           84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF  159 (369)
T ss_dssp             TTCSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred             ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence              0 1         1235679999999998877765543    2456678888999999999999999988765433221


Q ss_pred             cceeeeEEEEEecCC---cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce-eEEEECcCCCe
Q psy14961        220 SILFGATSVDFSVSG---RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV-SCLQVSPDGTA  278 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~---~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i-~~i~~s~~~~~  278 (320)
                      .    .....++++.   ..+++++.+|.+..||..+++.+-+.. ...++ ...+++++|..
T Consensus       160 ~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~~  217 (369)
T 2hz6_A          160 D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGLR  217 (369)
T ss_dssp             E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSCE
T ss_pred             c----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCceE
Confidence            1    1122233332   467778899999999998887765444 33444 44566667753

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.20  E-value=1.1e-08  Score=87.71  Aligned_cols=269  Identities=12%  Similarity=0.060  Sum_probs=160.3

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      ..|| .+++.......+...+.++...++|.+ ..++.+  +..+|..  .   ...................  +..++
T Consensus        43 ~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~--l~~~d~~--g---~~~~~~~~~~~~~~~~~~~--~~~l~  111 (330)
T 3hxj_A           43 YAIN-TDGSVKWFFKSGEIIECRPSIGKDGTI-YFGSDK--VYAINPD--G---TEKWRFDTKKAIVSDFTIF--EDILY  111 (330)
T ss_dssp             EEEC-TTSCEEESSCGGGEEEECCEETTTTEE-CCSSCE--EEEECCC--G---GGGGGSCC-----CCEEEE--TTEEE
T ss_pred             EEEC-CCCcEEEEEecCCCcccceEEecCCcE-EEecCc--EEEECCC--C---cEEEEEECCCCcccCceEE--CCEEE
Confidence            4566 555555444455556677778788754 444443  6666531  1   1111222122222222222  56788


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--------  153 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--------  153 (320)
                      .++.++.+..+|.. ++....+......+.++..  .+++ .+..++.++.|..+|.. +.....+......        
T Consensus       112 v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~--~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~  186 (330)
T 3hxj_A          112 VTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIV--SEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK  186 (330)
T ss_dssp             EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE--CTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT
T ss_pred             EEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEE--cCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC
Confidence            88889999999988 7666555444333443333  3345 47778888999999998 7665444321111        


Q ss_pred             -----ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961        154 -----ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV  228 (320)
Q Consensus       154 -----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  228 (320)
                           +.. +.+..+| .+++...........+.++...++|. +..++.++.+..+|. +++....+......  ...+
T Consensus       187 ~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~--~~~~  260 (330)
T 3hxj_A          187 DGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRI--ESSP  260 (330)
T ss_dssp             TCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCC--CSCC
T ss_pred             CCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCc--cccc
Confidence                 122 5677778 66666655555556678888888876 555666778888875 34444433332221  1233


Q ss_pred             EEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        229 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       229 ~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .+.+++ .|..++.+|.+..+|. ++..+..+......+.++...++|+++ .++.+|.+++...+.
T Consensus       261 ~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          261 VIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYALFNLE  324 (330)
T ss_dssp             EECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEEEC--
T ss_pred             eEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEEeccc
Confidence            445455 5667788888999996 555555555455677888888888755 488899998877543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.20  E-value=1.7e-08  Score=85.72  Aligned_cols=222  Identities=9%  Similarity=0.085  Sum_probs=130.1

Q ss_pred             eEeecccceeEEEEEe-----CccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccc-cccc-cccccCeEEEEe
Q psy14961          2 IIWDGLTQTKEHSVTM-----PATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAK-KKTV-ATHTSFISCCIF   73 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~-----~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~-~~~~-~~h~~~v~~~~~   73 (320)
                      .+||..+++... +..     +...+.+++++++ |+++++.. .+.|.+|+.. .. .... .... ......+..+.+
T Consensus        49 ~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~  124 (314)
T 1pjx_A           49 LRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GT-FEEIAKKDSEGRRMQGCNDCAF  124 (314)
T ss_dssp             EEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SC-EEECCSBCTTSCBCBCCCEEEE
T ss_pred             EEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CC-EEEEEeccCCCccccCCcCEEE
Confidence            467766555432 222     2356789999999 76555554 3468888764 21 1110 0000 112234678888


Q ss_pred             cCCCCEEEEEeCC---------------CeEEEEECCCcceeeecccCccceeEEEEe--eCCCCCEEEEE-eCCCeEEE
Q psy14961         74 PNSDQQILTGSGD---------------CTCALWDVESSQLLQSFHGHTGELMDLDLA--PSETGNTFVSG-SSDKLVNI  135 (320)
Q Consensus        74 ~~~~~~l~s~~~d---------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~l~s~-~~dg~i~l  135 (320)
                      .+++..+++...+               +.|..|+.. ++.... ..+......+++.  .+++++.++.+ ..++.|.+
T Consensus       125 d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~  202 (314)
T 1pjx_A          125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS  202 (314)
T ss_dssp             CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE
T ss_pred             CCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEE
Confidence            8888777666544               567777765 443322 2222334556654  11456555544 56788888


Q ss_pred             EeCC-CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC-CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961        136 WDMR-TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ-SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV  213 (320)
Q Consensus       136 wd~~-~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~  213 (320)
                      ||+. .+....              .        .....+.++. ..+..++++++|+.+++...++.|.+||..+++..
T Consensus       203 ~~~~~~g~~~~--------------~--------~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~  260 (314)
T 1pjx_A          203 YDIKGPAKIEN--------------K--------KVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPK  260 (314)
T ss_dssp             EEEEETTEEEE--------------E--------EEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCS
T ss_pred             EECCCCCcccc--------------c--------eEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEe
Confidence            8864 232100              0        0111122233 45678999999998888878899999998865544


Q ss_pred             eEEecCcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCC
Q psy14961        214 ACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLK  253 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~  253 (320)
                      ..+....  ..+..++|+|++..|+.+ ..++.|..|+...
T Consensus       261 ~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          261 MRIRCPF--EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEECSS--SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEeCCC--CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            4333221  235778899999955554 4567898888653

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.19  E-value=1.3e-09  Score=95.01  Aligned_cols=253  Identities=10%  Similarity=-0.031  Sum_probs=154.6

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccccc-------c
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATH-------T   65 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h-------~   65 (320)
                      +.|..+.+.+..+.....+  .++|+||++++..+.          .++.|.+||.....    ...++...       .
T Consensus        50 vID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~----vv~~I~v~~~~~~~~g  123 (368)
T 1mda_H           50 VSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL----PIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC----EEEEEEETTSCSCCBS
T ss_pred             EEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC----EEEEEECCCccccccC
Confidence            6788888888888776666  799999999888875          46889999875322    12222211       0


Q ss_pred             cCeEEEEecCCCCEEEEEeC--CCeEEE--EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-
Q psy14961         66 SFISCCIFPNSDQQILTGSG--DCTCAL--WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT-  140 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~--dg~v~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~-  140 (320)
                      ..-..+.+++++++++++..  +..+.+  +|+.+   +..+... +.   ..+.|.. ...+++.+.|+.+.+.|+.+ 
T Consensus       124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g-~~~~~~~~~dg~~~~vd~~~~  195 (368)
T 1mda_H          124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGA-AATHYLGSCPASLAASDLAAA  195 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEE-TTEEECCCCTTSCEEEECCSS
T ss_pred             CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCC-CeEEEEEcCCCCEEEEECccc
Confidence            12336788999999998875  467888  88876   3333211 11   1122221 23455566677777777765 


Q ss_pred             ----CcEEE-------------EeccCC--ccccCCCeEEEEECcCCe--eeeeecC-------C---CCCeEEEEEcCC
Q psy14961        141 ----GYCVQ-------------SFEGHH--NLITDDKLVNIWDMRTGY--CVQSFEG-------H---QSDVNSVKFHPS  189 (320)
Q Consensus       141 ----~~~~~-------------~~~~~~--~~~~~d~~i~iwd~~~~~--~~~~~~~-------~---~~~v~~v~~~p~  189 (320)
                          ++...             ......  ..++. +.+.+.|.....  .+..+.-       +   ......++++|+
T Consensus       196 ~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~d  274 (368)
T 1mda_H          196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN  274 (368)
T ss_dssp             CCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETT
T ss_pred             cccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCC
Confidence                22211             000000  11223 567777775432  2221110       0   011122689999


Q ss_pred             CCEEEEeeC---------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEE
Q psy14961        190 GDAVATGSD---------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVN  258 (320)
Q Consensus       190 g~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~  258 (320)
                      ++.++.+..         ++.+.++|+.+.+.+..++...   ....+.|+|||+ .+++.. .+++|.++|+.+.+.+.
T Consensus       275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~  351 (368)
T 1mda_H          275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS  351 (368)
T ss_dssp             TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred             CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence            998875432         2356699999988766554322   356789999998 455555 58999999999999888


Q ss_pred             EeecCCCceeEEEECc
Q psy14961        259 HLMGHENRVSCLQVSP  274 (320)
Q Consensus       259 ~~~~h~~~i~~i~~s~  274 (320)
                      ++..... ...|++.+
T Consensus       352 ~I~vg~~-P~~i~~~~  366 (368)
T 1mda_H          352 SVELDKG-PESLSVQN  366 (368)
T ss_dssp             ECCCCSC-CCEEECCC
T ss_pred             EEECCCC-CCEEEeec
Confidence            8764443 35666654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.16  E-value=5.2e-08  Score=82.55  Aligned_cols=208  Identities=16%  Similarity=0.124  Sum_probs=120.6

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQ   79 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~   79 (320)
                      +.||..+++.. ... ....+.+++++++|+++++.  ++.|.+||.....  ........  .....+..+.+.+++..
T Consensus        38 ~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~--~~~~~~~~~~~~~~~~~di~~d~dG~l  111 (297)
T 3g4e_A           38 CRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS--AVVLATVDNDKKNNRFNDGKVDPAGRY  111 (297)
T ss_dssp             EEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE--EEEEEECCTTCSSEEEEEEEECTTSCE
T ss_pred             EEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc--EEEEEecCCCCCCCCCCCEEECCCCCE
Confidence            45666554432 222 34678899999999966654  4678888864211  11111111  11233567888888886


Q ss_pred             EEEEeCC---------CeEEEEECCC-cceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeC--CCCcEEEE
Q psy14961         80 ILTGSGD---------CTCALWDVES-SQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDM--RTGYCVQS  146 (320)
Q Consensus        80 l~s~~~d---------g~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~--~~~~~~~~  146 (320)
                      +++...+         ..-.+|.+.. ++... +.........+++  +++++.++ +.+.++.|.+||+  .++.... 
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~--spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~-  187 (297)
T 3g4e_A          112 FAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDW--SLDHKIFYYIDSLSYSVDAFDYDLQTGQISN-  187 (297)
T ss_dssp             EEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEE--CTTSCEEEEEEGGGTEEEEEEECTTTCCEEE-
T ss_pred             EEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEE--cCCCCEEEEecCCCCcEEEEeccCCCCcccC-
Confidence            6654321         2334554432 33222 2222233345655  55677665 4556788988886  3443210 


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                                           .+....+..+......++++++|+..++...++.|..||..+++.+..+....  ..++
T Consensus       188 ---------------------~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~--~~~t  244 (297)
T 3g4e_A          188 ---------------------RRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV--DKTT  244 (297)
T ss_dssp             ---------------------EEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--SBEE
T ss_pred             ---------------------cEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--CCce
Confidence                                 00111122223456789999999988888888899999998887766655432  2357


Q ss_pred             EEEEe-cCCcEEEEEeC
Q psy14961        227 SVDFS-VSGRLLFAGYN  242 (320)
Q Consensus       227 ~~~~s-~~~~~l~~g~~  242 (320)
                      +++|+ |+++.|+..+.
T Consensus       245 ~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          245 SCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEEEESGGGCEEEEEEB
T ss_pred             EEEEeCCCCCEEEEEcC
Confidence            89998 88887766553

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.15  E-value=2.8e-08  Score=88.22  Aligned_cols=197  Identities=9%  Similarity=0.081  Sum_probs=127.3

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEE
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCV  144 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~  144 (320)
                      ....+.+.+++..+++...++.|+.||++++......... .... +++  +++++.|+++..++  .|.+++...+...
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~--~~~g~~l~~~d~~~~~~I~~~d~~~~~~~  207 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAV--TKDKQRVYSIGWEGTHTVYVYMKASGWAP  207 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEE--CTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeE--ecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence            4567888887776666666789999999877665443332 2222 444  55688888887765  6777776544322


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE---ecCc
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY---KKDS  220 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~  220 (320)
                      ..+                        ..+.. ....+.+++++|++..|+.+..++.|..||..++......   ....
T Consensus       208 ~~~------------------------g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~  263 (409)
T 3hrp_A          208 TRI------------------------GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS  263 (409)
T ss_dssp             EEE------------------------EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred             EEe------------------------eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence            111                        00111 2334678999995555655777889999999876532220   1111


Q ss_pred             ceeeeE-EEEEecC-CcEEEEEeCCCeEEEEcCCCCeEEEEeecCC---------------CceeEEEECcCCCeEEEec
Q psy14961        221 ILFGAT-SVDFSVS-GRLLFAGYNDYTINVWDSLKCCRVNHLMGHE---------------NRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       221 ~~~~~~-~~~~s~~-~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~---------------~~i~~i~~s~~~~~l~s~s  283 (320)
                      ...... .++|+|+ +.++++-..++.|..|+....  ...+.++.               .....|+|+|+|+++++-+
T Consensus       264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~  341 (409)
T 3hrp_A          264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG  341 (409)
T ss_dssp             CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred             CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence            111112 7899995 556666667889999986543  33333332               3578999999999999888


Q ss_pred             -CCCceEeeec
Q psy14961        284 -WDTTLRDEES  293 (320)
Q Consensus       284 -~D~~ir~~~~  293 (320)
                       .+.+|+.++.
T Consensus       342 ~~~~~I~~~~~  352 (409)
T 3hrp_A          342 FKGYCLRKLDI  352 (409)
T ss_dssp             TTTCEEEEEET
T ss_pred             CCCCEEEEEEC
Confidence             8999999994

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.13  E-value=9.9e-08  Score=84.12  Aligned_cols=244  Identities=11%  Similarity=0.073  Sum_probs=130.6

Q ss_pred             CCCCEEE-EecCCCeEEEEEecccCCccccccccc-----cccc--CeEEEEecCCCCEEEEEeCC------CeEEEEEC
Q psy14961         29 PSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVA-----THTS--FISCCIFPNSDQQILTGSGD------CTCALWDV   94 (320)
Q Consensus        29 ~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~-----~h~~--~v~~~~~~~~~~~l~s~~~d------g~v~iwd~   94 (320)
                      ++.++|+ ++..++.|.++|+............+.     ...+  .---+...+++ .++++..+      |.+.+.|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            6677555 566788999999853222222222221     0000  11123456777 66666555      78999999


Q ss_pred             CCcceeeecccCccc---eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         95 ESSQLLQSFHGHTGE---LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      ++.+.+..+.....+   -+.+-+  +++++.+++..+-.--   ....|...     ..........|.+||+.+++.+
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~--~p~~~~mvsS~wg~p~---~~~~g~~~-----~~~~~~~~d~V~v~D~~~~k~~  241 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWW--NLPNEVLVSSEWAVPN---TIEDGLKL-----EHLKDRYGNRIHFWDLRKRKRI  241 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEE--ETTTTEEEECBCCCHH---HHTTCCCT-----TTHHHHSCCEEEEEETTTTEEE
T ss_pred             CCCeEEEEEccCCCCccccceEEE--CCCCCEEEEccCcCcc---ccccccch-----hhhhhccCCEEEEEECCCCcEe
Confidence            999988877632222   122333  4467777777521000   00000000     0000012334444444444444


Q ss_pred             eeecCC--CCCeEEEEE--cCCCCEEEEee------CCCeEEEEECCCCee--EeEEecCc-----------c-----ee
Q psy14961        172 QSFEGH--QSDVNSVKF--HPSGDAVATGS------DDATCRLFDLRADKE--VACYKKDS-----------I-----LF  223 (320)
Q Consensus       172 ~~~~~~--~~~v~~v~~--~p~g~~l~s~s------~dg~i~iwd~~~~~~--~~~~~~~~-----------~-----~~  223 (320)
                      .++.--  ......+.|  +|++++++.++      .+++|.+|..+.++.  ...+....           .     ..
T Consensus       242 ~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~  321 (462)
T 2ece_A          242 HSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPP  321 (462)
T ss_dssp             EEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred             eEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCC
Confidence            433221  112334555  99999887666      466887766554321  11110000           0     12


Q ss_pred             eeEEEEEecCCcEEEEEe-CCCeEEEEcCCC---CeEEEEeecC-----------C---CceeEEEECcCCCeEEEec
Q psy14961        224 GATSVDFSVSGRLLFAGY-NDYTINVWDSLK---CCRVNHLMGH-----------E---NRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~---~~~~~~~~~h-----------~---~~i~~i~~s~~~~~l~s~s  283 (320)
                      .+..+.+||||++|+++. ..+.|.+||+..   .+.+.+..-.           .   ..-..++++|||++|..+.
T Consensus       322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            256788999999998887 478999999742   3444433211           0   1358899999999988875

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.12  E-value=4e-08  Score=92.83  Aligned_cols=245  Identities=13%  Similarity=0.133  Sum_probs=154.0

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEE-EEecCCCCEEEEEeC------CCeEEEEECCCcceee
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISC-CIFPNSDQQILTGSG------DCTCALWDVESSQLLQ  101 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~-~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~  101 (320)
                      ++..|+.++.|+.+..+|....+.......... .....+.+ ...  .+..++.++.      ++.|+.+|..+++.+.
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W  204 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW  204 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence            456788888899999998753322111110000 00011111 111  1345666553      7999999999999887


Q ss_pred             ecccCccc-------------------------------e-eEEEEeeCCCCCEEEEEeCCC------------------
Q psy14961        102 SFHGHTGE-------------------------------L-MDLDLAPSETGNTFVSGSSDK------------------  131 (320)
Q Consensus       102 ~~~~~~~~-------------------------------v-~~~~~~~~~~~~~l~s~~~dg------------------  131 (320)
                      .+......                               + ..+++  ++++..++.++.++                  
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~--d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~  282 (677)
T 1kb0_A          205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTF--DAELNTMYVGTGNGSPWSHKVRSPKGGDNLYL  282 (677)
T ss_dssp             EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEE--ETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred             EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeE--cCCCCEEEEECCCCccccCCCCCccCCCCeee
Confidence            66432211                               0 12333  34567888877664                  


Q ss_pred             -eEEEEeCCCCcEEEEeccCCc---------------------------cccCCCeEEEEECcCCeeeeeecCCC-----
Q psy14961        132 -LVNIWDMRTGYCVQSFEGHHN---------------------------LITDDKLVNIWDMRTGYCVQSFEGHQ-----  178 (320)
Q Consensus       132 -~i~lwd~~~~~~~~~~~~~~~---------------------------~~~~d~~i~iwd~~~~~~~~~~~~~~-----  178 (320)
                       .|..+|..+|+.+..++....                           ....++.++++|.++++.+..++...     
T Consensus       283 ~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~  362 (677)
T 1kb0_A          283 ASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS  362 (677)
T ss_dssp             TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred             EEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence             599999999988766542110                           01346789999999998876543211     


Q ss_pred             ------CCe------------------------EEEEEcCCCCEEEEeeC------------------------------
Q psy14961        179 ------SDV------------------------NSVKFHPSGDAVATGSD------------------------------  198 (320)
Q Consensus       179 ------~~v------------------------~~v~~~p~g~~l~s~s~------------------------------  198 (320)
                            .++                        ..++++|++..+++...                              
T Consensus       363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  442 (677)
T 1kb0_A          363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT  442 (677)
T ss_dssp             EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred             ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence                  011                        15789998888876532                              


Q ss_pred             -------------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-CC
Q psy14961        199 -------------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-HE  264 (320)
Q Consensus       199 -------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~  264 (320)
                                   .|.|..||+.+++.+-.++.....   ....+...+..++.|+.+|.+++||..+++.+.++.. +.
T Consensus       443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~---~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~  519 (677)
T 1kb0_A          443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW---NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG  519 (677)
T ss_dssp             CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC---CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC---cCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC
Confidence                         278999999999876655543222   2234567788899999999999999999999887763 33


Q ss_pred             CceeEEEECcCCCeEEE
Q psy14961        265 NRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       265 ~~i~~i~~s~~~~~l~s  281 (320)
                      ....-+.|+++|++++.
T Consensus       520 ~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          520 VVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             CCSCCEEEEETTEEEEE
T ss_pred             cccCCEEEEeCCEEEEE
Confidence            33355677888876544

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.10  E-value=2.3e-08  Score=94.64  Aligned_cols=245  Identities=13%  Similarity=0.114  Sum_probs=151.3

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEE-EEecCCCCEEEEEe------CCCeEEEEECCCcceee
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISC-CIFPNSDQQILTGS------GDCTCALWDVESSQLLQ  101 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~-~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~  101 (320)
                      ++..|+.++.|+.+..+|....+........... ....+.+ ...  .+..++.++      .+|.|..||..+++.+.
T Consensus       120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  197 (689)
T 1yiq_A          120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW  197 (689)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence            3457888888999999987533222111110000 0001110 001  133555554      37899999999999877


Q ss_pred             ecccCc------------------------------ccee-EEEEeeCCCCCEEEEEeCCCe------------------
Q psy14961        102 SFHGHT------------------------------GELM-DLDLAPSETGNTFVSGSSDKL------------------  132 (320)
Q Consensus       102 ~~~~~~------------------------------~~v~-~~~~~~~~~~~~l~s~~~dg~------------------  132 (320)
                      .+....                              ..++ .+++  +++...++.++.++.                  
T Consensus       198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~--d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~  275 (689)
T 1yiq_A          198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAY--DPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS  275 (689)
T ss_dssp             EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEE--ETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred             EecccCCCcccccccccccccccccCCceeeecCCCCccccceeE--cCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence            654210                              0111 2333  345678888887763                  


Q ss_pred             -EEEEeCCCCcEEEEeccCCc---------------------------cccCCCeEEEEECcCCeeeeeecCCC------
Q psy14961        133 -VNIWDMRTGYCVQSFEGHHN---------------------------LITDDKLVNIWDMRTGYCVQSFEGHQ------  178 (320)
Q Consensus       133 -i~lwd~~~~~~~~~~~~~~~---------------------------~~~~d~~i~iwd~~~~~~~~~~~~~~------  178 (320)
                       |..+|..+|+.+..++....                           ....++.++++|.++++.+...+...      
T Consensus       276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~  355 (689)
T 1yiq_A          276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG  355 (689)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence             99999999988776643100                           01246789999999998763321100      


Q ss_pred             ----------------------C-----------CeEEEEEcCCCCEEEEeeC---------------------------
Q psy14961        179 ----------------------S-----------DVNSVKFHPSGDAVATGSD---------------------------  198 (320)
Q Consensus       179 ----------------------~-----------~v~~v~~~p~g~~l~s~s~---------------------------  198 (320)
                                            .           .-..++++|+...+++...                           
T Consensus       356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  435 (689)
T 1yiq_A          356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR  435 (689)
T ss_dssp             EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred             cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence                                  0           0113788998887776522                           


Q ss_pred             ------------------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961        199 ------------------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL  260 (320)
Q Consensus       199 ------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~  260 (320)
                                        +|.|..||+.+++.+-.++......   ...+...+.+++.|+.||.++.||..+++.+-++
T Consensus       436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~---~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~  512 (689)
T 1yiq_A          436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN---GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ  512 (689)
T ss_dssp             ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC---CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc---CccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence                              3789999999998776555433221   2245667889999999999999999999988777


Q ss_pred             ecCCC-ceeEEEECcCCCeEEE
Q psy14961        261 MGHEN-RVSCLQVSPDGTAFSS  281 (320)
Q Consensus       261 ~~h~~-~i~~i~~s~~~~~l~s  281 (320)
                      ..... ...-+.|+.||++++.
T Consensus       513 ~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          513 PAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             ECSSCCCSCCEEEEETTEEEEE
T ss_pred             eCCCCcccCceEEEECCEEEEE
Confidence            54332 2345778889886443

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.08  E-value=3.2e-07  Score=80.24  Aligned_cols=250  Identities=11%  Similarity=0.029  Sum_probs=151.9

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCccccccccccc-------ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH-------TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  102 (320)
                      .+..|+.++.++.+..+|....+.....  .+...       ...+.+.. ...+..++.++.++.+..+|..+++.+..
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~  128 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSV--SLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQ  128 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEE--ECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeee--cCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence            3456777778888888887432211111  11100       12222221 12356888899999999999999988766


Q ss_pred             cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc------------------ccCCCeEEEEE
Q psy14961        103 FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL------------------ITDDKLVNIWD  164 (320)
Q Consensus       103 ~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~------------------~~~d~~i~iwd  164 (320)
                      ............+    .+..++.++.++.|..+|..+|+.+..+......                  ...++.+..+|
T Consensus       129 ~~~~~~~~~~p~~----~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d  204 (376)
T 3q7m_A          129 TKVAGEALSRPVV----SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVL  204 (376)
T ss_dssp             EECSSCCCSCCEE----ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEE
T ss_pred             EeCCCceEcCCEE----ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEE
Confidence            5543221111112    1458888999999999999999876655322110                  12467888999


Q ss_pred             CcCCeeeeeecCCCCC-------eEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc
Q psy14961        165 MRTGYCVQSFEGHQSD-------VNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR  235 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~-------v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  235 (320)
                      .++++...........       +..+.-.|  .+..++.++.++.+..+|..+++.+-......    ...+  ..++.
T Consensus       205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~----~~~~--~~~~~  278 (376)
T 3q7m_A          205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS----VNDF--IVDGN  278 (376)
T ss_dssp             TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC----EEEE--EEETT
T ss_pred             CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC----CCCc--eEECC
Confidence            9988876554322100       00011111  24678888889999999999887664433221    1222  23466


Q ss_pred             EEEEEeCCCeEEEEcCCCCeEEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        236 LLFAGYNDYTINVWDSLKCCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .++.++.++.+..+|..+++.+-.... ....+.....  .+..|+.++.++.+..++.+
T Consensus       279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~  336 (376)
T 3q7m_A          279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVE  336 (376)
T ss_dssp             EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECC
Confidence            788888899999999988876644431 1222233333  24577888889999999854

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.06  E-value=2.9e-08  Score=93.96  Aligned_cols=218  Identities=14%  Similarity=0.114  Sum_probs=139.3

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccC--ccceeEEEEeeCCCCCEEEEEe------CCCeEEEEeCCCCcEEEEec
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGH--TGELMDLDLAPSETGNTFVSGS------SDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~~------~dg~i~lwd~~~~~~~~~~~  148 (320)
                      +..++.++.|+.+..+|..+++.+..+...  ......+...|.-.+..++.++      .++.|..||.++|+.+..+.
T Consensus       121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~  200 (689)
T 1yiq_A          121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY  200 (689)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence            568899999999999999999988766532  1110111101100124555554      37899999999999876654


Q ss_pred             cCC-------------------------------------------ccc---cCCC-------------------eEEEE
Q psy14961        149 GHH-------------------------------------------NLI---TDDK-------------------LVNIW  163 (320)
Q Consensus       149 ~~~-------------------------------------------~~~---~~d~-------------------~i~iw  163 (320)
                      ...                                           ..+   +.++                   .|..+
T Consensus       201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al  280 (689)
T 1yiq_A          201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV  280 (689)
T ss_dssp             SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred             ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence            100                                           000   0111                   38889


Q ss_pred             ECcCCeeeeeecC--CC-------CCeEEEEEcCCCC---EEEEeeCCCeEEEEECCCCeeEeEEecCcce---------
Q psy14961        164 DMRTGYCVQSFEG--HQ-------SDVNSVKFHPSGD---AVATGSDDATCRLFDLRADKEVACYKKDSIL---------  222 (320)
Q Consensus       164 d~~~~~~~~~~~~--~~-------~~v~~v~~~p~g~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---------  222 (320)
                      |.++++.+-.++.  |.       .+........+|+   .++.++.+|.++++|..+++.+...+.....         
T Consensus       281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~  360 (689)
T 1yiq_A          281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT  360 (689)
T ss_dssp             ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred             EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence            9999988766543  21       1222233333564   7889999999999999999876433211100         


Q ss_pred             ---------------------e-------eeEEEEEecCCcEEEEEeC--------------------------------
Q psy14961        223 ---------------------F-------GATSVDFSVSGRLLFAGYN--------------------------------  242 (320)
Q Consensus       223 ---------------------~-------~~~~~~~s~~~~~l~~g~~--------------------------------  242 (320)
                                           +       .-..++|+|+..+++++.+                                
T Consensus       361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p  440 (689)
T 1yiq_A          361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP  440 (689)
T ss_dssp             TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred             CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence                                 0       0112678998888877632                                


Q ss_pred             -------------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        243 -------------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       243 -------------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                                   +|.|..||+.+++.+-++..+. ++..-.++..+.+++.|+.|+.++.||.++
T Consensus       441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~t  505 (689)
T 1yiq_A          441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADT  505 (689)
T ss_dssp             SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred             cccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCC
Confidence                         3779999999887765554433 334446666778999999999999999643

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.03  E-value=8.8e-08  Score=90.53  Aligned_cols=215  Identities=12%  Similarity=0.114  Sum_probs=143.1

Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccC-c----cceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEE
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGH-T----GELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCV  144 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~  144 (320)
                      .+..++.++.|+.+..+|..+++.+..+... .    ..+..   .|...+..++.++.      ++.|..+|..+|+.+
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~---~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~  203 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITG---APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERK  203 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCS---CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccccc---CcEEECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence            3568899999999999999999988776643 1    11111   11112346666653      689999999999887


Q ss_pred             EEeccCCc--------------------------------------------cc---cCC-------------------C
Q psy14961        145 QSFEGHHN--------------------------------------------LI---TDD-------------------K  158 (320)
Q Consensus       145 ~~~~~~~~--------------------------------------------~~---~~d-------------------~  158 (320)
                      ..+.....                                            .+   +.+                   .
T Consensus       204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~  283 (677)
T 1kb0_A          204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA  283 (677)
T ss_dssp             EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred             EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence            65532110                                            00   011                   1


Q ss_pred             eEEEEECcCCeeeeeecC--CC-------CCeEEEEEcCCC---CEEEEeeCCCeEEEEECCCCeeEeEEecCcce----
Q psy14961        159 LVNIWDMRTGYCVQSFEG--HQ-------SDVNSVKFHPSG---DAVATGSDDATCRLFDLRADKEVACYKKDSIL----  222 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~--~~-------~~v~~v~~~p~g---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----  222 (320)
                      .|..+|.++++..-.++.  |.       ....-+....+|   ..++.++.+|.+.++|..+++.+...+.....    
T Consensus       284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~  363 (677)
T 1kb0_A          284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG  363 (677)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence            477788888887765432  21       122233444467   67899999999999999999887554422100    


Q ss_pred             ----------------------e-------eeEEEEEecCCcEEEEEeCC------------------------------
Q psy14961        223 ----------------------F-------GATSVDFSVSGRLLFAGYND------------------------------  243 (320)
Q Consensus       223 ----------------------~-------~~~~~~~s~~~~~l~~g~~d------------------------------  243 (320)
                                            +       .-..++|+|++.+++++..+                              
T Consensus       364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g  443 (677)
T 1kb0_A          364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA  443 (677)
T ss_dssp             ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred             cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence                                  0       00146789998888876432                              


Q ss_pred             -------------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        244 -------------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       244 -------------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                                   |.|..||..+++.+-+.. +..++....++.++.+++.++.|+.++.+|.+
T Consensus       444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~  506 (677)
T 1kb0_A          444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA  506 (677)
T ss_dssp             EEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred             cccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence                         789999998887765443 44455666677788888889999999999964

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.02  E-value=2.4e-08  Score=94.86  Aligned_cols=208  Identities=15%  Similarity=0.085  Sum_probs=120.1

Q ss_pred             cccCeEEEEecCCCCEEEE-----EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         64 HTSFISCCIFPNSDQQILT-----GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s-----~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      |...+....|++++++|+-     |+.+..|++||+++++.+.... .......++|+   ||+.|+.++.+..      
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws---Dg~~l~y~~~~~~------  196 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL---GNEGFFYSSYDKP------  196 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE---TTTEEEEEESSCC------
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe---CCCEEEEEEecCc------
Confidence            4446777889999998873     3333689999999988654311 11112334554   5777877776632      


Q ss_pred             CCCcEEEEeccCCccccCCCeEEEEECcCCe----eeeeecC-CCCCeEEEEEcCCCCEEEEee----CCCeEEEEECCC
Q psy14961        139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGY----CVQSFEG-HQSDVNSVKFHPSGDAVATGS----DDATCRLFDLRA  209 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~----~~~~~~~-~~~~v~~v~~~p~g~~l~s~s----~dg~i~iwd~~~  209 (320)
                      ..+.    .    ........|++|++.+..    ++..... |.....++.|+|+|++|+...    .++.+.++|+.+
T Consensus       197 ~~~~----~----~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~  268 (693)
T 3iuj_A          197 DGSE----L----SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ  268 (693)
T ss_dssp             C---------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred             cccc----c----cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence            0000    0    000112345555554432    3333333 445577899999999875432    235899999876


Q ss_pred             Ce-eEeEEecCcceeeeEEEEEecCCcEEEEEeC----CCeEEEEcCCCCeE--EEEeecCCCceeEEEECcCCCeEEEe
Q psy14961        210 DK-EVACYKKDSILFGATSVDFSVSGRLLFAGYN----DYTINVWDSLKCCR--VNHLMGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       210 ~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd~~~~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      +. ....+.....  ..... ++++|..|+.-++    .+.|..+|+.....  ...+.+|...+.  .|+++++.|+..
T Consensus       269 ~~~~~~~l~~~~~--~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~  343 (693)
T 3iuj_A          269 ENAPLLTVQGDLD--ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE  343 (693)
T ss_dssp             TTCCCEEEECSSS--SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred             CCCceEEEeCCCC--ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence            52 2222222111  11222 6677666555443    36788899876543  245677776665  999999888777


Q ss_pred             cCCC---ceEeeecc
Q psy14961        283 SWDT---TLRDEESK  294 (320)
Q Consensus       283 s~D~---~ir~~~~~  294 (320)
                      ..+.   .|++++..
T Consensus       344 ~~~~g~~~l~~~d~~  358 (693)
T 3iuj_A          344 YMVDATARVEQFDYE  358 (693)
T ss_dssp             EEETTEEEEEEECTT
T ss_pred             EEECCeeEEEEEECC
Confidence            6544   57777753

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.99  E-value=2.3e-07  Score=78.84  Aligned_cols=208  Identities=12%  Similarity=0.053  Sum_probs=120.5

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEEEEecCCCCEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQI   80 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l   80 (320)
                      ..|+. +++. ..+..+...+.+++++++|+++++...++.|.+|+.+  ............ ....+..+.+.+++..+
T Consensus        70 ~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~  145 (305)
T 3dr2_A           70 LGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARDGAIW  145 (305)
T ss_dssp             EEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECEETTEECSCCCCEEECTTSCEE
T ss_pred             EEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEEEEEeccCCCccCCCCCEEECCCCCEE
Confidence            35555 2322 2334456678899999999977776666788888753  111111011111 11234567888888877


Q ss_pred             EE----EeC-------------CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC------CeEEEEe
Q psy14961         81 LT----GSG-------------DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD------KLVNIWD  137 (320)
Q Consensus        81 ~s----~~~-------------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d------g~i~lwd  137 (320)
                      ++    |..             .+.|..+|..+++.....  .......+++  +++++.|+.+...      +.|.+|+
T Consensus       146 ~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~--spdg~~lyv~~~~~~~~~~~~i~~~~  221 (305)
T 3dr2_A          146 FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF--SPDEQTLYVSQTPEQGHGSVEITAFA  221 (305)
T ss_dssp             EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE--CTTSSEEEEEECCC---CCCEEEEEE
T ss_pred             EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE--cCCCCEEEEEecCCcCCCCCEEEEEE
Confidence            75    331             256777787666544322  2233445555  5678877777654      5788887


Q ss_pred             CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961        138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK  217 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~  217 (320)
                      +..+. +...             +++        ...  .......++++++|+..++. .+ .|.+|+.. ++.+..+.
T Consensus       222 ~~~~~-l~~~-------------~~~--------~~~--~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g~~~~~~~  274 (305)
T 3dr2_A          222 WRDGA-LHDR-------------RHF--------ASV--PDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-GQLLGHIP  274 (305)
T ss_dssp             EETTE-EEEE-------------EEE--------ECC--SSSCCCSEEECTTSCEEECC-SS-EEEEECTT-SCEEEEEE
T ss_pred             ecCCC-ccCC-------------eEE--------EEC--CCCCCCeEEECCCCCEEEec-CC-cEEEECCC-CCEEEEEE
Confidence            65432 1100             000        000  11234568899999955444 44 49999984 55554444


Q ss_pred             cCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        218 KDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       218 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                      ...   .+..++|+|+++.|..++.++..+
T Consensus       275 ~~~---~~~~~~f~~d~~~L~it~~~~l~~  301 (305)
T 3dr2_A          275 TPG---TASNCTFDQAQQRLFITGGPCLWM  301 (305)
T ss_dssp             CSS---CCCEEEECTTSCEEEEEETTEEEE
T ss_pred             CCC---ceeEEEEeCCCCEEEEEcCCeEEE
Confidence            332   356788999999888888765443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.95  E-value=1.8e-06  Score=74.13  Aligned_cols=205  Identities=9%  Similarity=-0.028  Sum_probs=115.9

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQ   79 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~   79 (320)
                      .+||..+++.. .+.. ...+.+++++++|+++++. . ..|.+||.....  ........  .....+..+.+.+++..
T Consensus        74 ~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~~G~l  147 (326)
T 2ghs_A           74 HELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGV--LTLHAELESDLPGNRSNDGRMHPSGAL  147 (326)
T ss_dssp             EEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCC--EEEEECSSTTCTTEEEEEEEECTTSCE
T ss_pred             EEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCc--EEEEeeCCCCCCCCCCCCEEECCCCCE
Confidence            45666554432 2232 3578899999999877765 3 348888764221  11111111  11234677888888876


Q ss_pred             EEEEeC------CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE-eCCCeEEEEeCC--CC-cEEEEecc
Q psy14961         80 ILTGSG------DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG-SSDKLVNIWDMR--TG-YCVQSFEG  149 (320)
Q Consensus        80 l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~--~~-~~~~~~~~  149 (320)
                      +++...      .+.|..++  +++... +.........+++  +++++.++.+ +.++.|.+||+.  ++ ...     
T Consensus       148 ~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~--s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~-----  217 (326)
T 2ghs_A          148 WIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICF--SPDGTTGYFVDTKVNRLMRVPLDARTGLPTG-----  217 (326)
T ss_dssp             EEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEE--CTTSCEEEEEETTTCEEEEEEBCTTTCCBSS-----
T ss_pred             EEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEE--cCCCCEEEEEECCCCEEEEEEcccccCCccc-----
Confidence            665432      24455555  444322 2222223445555  5567766544 456789899875  33 210     


Q ss_pred             CCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961        150 HHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD  229 (320)
Q Consensus       150 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  229 (320)
                             .          ......+.........++++++|.+.++...++.|..||. .++.+..+....  ..+.+++
T Consensus       218 -------~----------~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~--~~~~~~a  277 (326)
T 2ghs_A          218 -------K----------AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG--KQTTCPA  277 (326)
T ss_dssp             -------C----------CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC--SBEEEEE
T ss_pred             -------C----------ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC--CCcEEEE
Confidence                   0          0011111122234578999999998887777789999998 455544443322  2357889


Q ss_pred             Ee-cCCcEEEEEeC
Q psy14961        230 FS-VSGRLLFAGYN  242 (320)
Q Consensus       230 ~s-~~~~~l~~g~~  242 (320)
                      |+ |++..|++++.
T Consensus       278 f~g~d~~~L~vt~~  291 (326)
T 2ghs_A          278 FIGPDASRLLVTSA  291 (326)
T ss_dssp             EESTTSCEEEEEEB
T ss_pred             EecCCCCEEEEEec
Confidence            98 88877765543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.88  E-value=1.4e-07  Score=81.63  Aligned_cols=204  Identities=9%  Similarity=0.034  Sum_probs=120.2

Q ss_pred             cCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecc-------cCccceeEEEEeeCCCCCEEEEEeC-----CC
Q psy14961         66 SFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFH-------GHTGELMDLDLAPSETGNTFVSGSS-----DK  131 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~l~s~~~-----dg  131 (320)
                      .....+.++++++.+++..+  ++.++||.+.+++. ..+.       .+...+..+++  +++++++++-..     ++
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~--d~~g~L~v~D~g~~~~~~~   93 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKS--DGNGIVWMLDNGNQSKSVP   93 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEE--CSSSEEEEEECHHHHTSCC
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEE--cCCCcEEEEcCCCCcCCCC
Confidence            45677888888887777532  34355665544443 2222       12344555655  445554443322     46


Q ss_pred             eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCE-EEEee---CCCeEEEEEC
Q psy14961        132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDA-VATGS---DDATCRLFDL  207 (320)
Q Consensus       132 ~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~-l~s~s---~dg~i~iwd~  207 (320)
                      .|.+||+.+++.+..+.....                     ...+...++.++++|++.. +++-.   .++.|.+||+
T Consensus        94 ~i~~~d~~tg~~~~~~~~~~~---------------------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~  152 (343)
T 2qe8_A           94 KLVAWDTLNNQLSRVIYLPPP---------------------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL  152 (343)
T ss_dssp             EEEEEETTTTEEEEEEECCTT---------------------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred             eEEEEECCCCeEEEEEECChh---------------------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence            777777776654443321100                     0012234578999986544 45555   6789999999


Q ss_pred             CCCeeEeEEecC-------------cc--------------eeeeEEEEEecCCcEEEEEeCCC-eEEEEcCC---CC--
Q psy14961        208 RADKEVACYKKD-------------SI--------------LFGATSVDFSVSGRLLFAGYNDY-TINVWDSL---KC--  254 (320)
Q Consensus       208 ~~~~~~~~~~~~-------------~~--------------~~~~~~~~~s~~~~~l~~g~~dg-~v~~wd~~---~~--  254 (320)
                      .+++.......+             ..              ...+..++|+|+|+.|+.+...+ .+..++..   ..  
T Consensus       153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~  232 (343)
T 2qe8_A          153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL  232 (343)
T ss_dssp             TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred             CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence            876654332110             00              01346799999999888887665 45444421   10  


Q ss_pred             ---eEE--EEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        255 ---CRV--NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       255 ---~~~--~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                         +..  ....++......|+++++|.++++...++.|..|+.
T Consensus       233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~  276 (343)
T 2qe8_A          233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS  276 (343)
T ss_dssp             CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred             ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence               000  012244445678999999999999999999999997

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.88  E-value=1.3e-06  Score=82.38  Aligned_cols=277  Identities=16%  Similarity=0.118  Sum_probs=147.3

Q ss_pred             EEEEcC-CCCEEEEecCCC-----------eEEEEEecccCCcccccccccc-cccCeEEEEecCCCCEEEEEeC-CCeE
Q psy14961         24 ACAYAP-SGSVVASGGLDN-----------KVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQILTGSG-DCTC   89 (320)
Q Consensus        24 ~~~~~~-~~~~l~s~~~dg-----------~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~-dg~v   89 (320)
                      ++++.+ ++++++.|+.+.           .+.+||...  ........+.. +.....+..+..++..++.|+. +..+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v  267 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT  267 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCC--CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence            556677 888888887543           466776642  22222222211 2222334556677888888884 5689


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CC-----CeEEEEeCCCCcEEEEe--------cc-CCccc
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SD-----KLVNIWDMRTGYCVQSF--------EG-HHNLI  154 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~d-----g~i~lwd~~~~~~~~~~--------~~-~~~~~  154 (320)
                      .+||+.+++-...-..+..... ......++++.++.|+ .+     ..+.+||..++.....-        .. +....
T Consensus       268 ~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~  346 (656)
T 1k3i_A          268 SLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY  346 (656)
T ss_dssp             EEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred             EEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence            9999987654322111111111 1122234678888888 34     46899999887644320        00 00000


Q ss_pred             -------------------cCCCeEEEEECcCCeeeeeecCCC---------CCeEEEEEcC-CCCEEEEeeCCC-----
Q psy14961        155 -------------------TDDKLVNIWDMRTGYCVQSFEGHQ---------SDVNSVKFHP-SGDAVATGSDDA-----  200 (320)
Q Consensus       155 -------------------~~d~~i~iwd~~~~~~~~~~~~~~---------~~v~~v~~~p-~g~~l~s~s~dg-----  200 (320)
                                         .....+..||..+..-......+.         ..-.++.|.. +++.++.|+.++     
T Consensus       347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~  426 (656)
T 1k3i_A          347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD  426 (656)
T ss_dssp             TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred             ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence                               013456777876654322221111         1224455544 567777877532     


Q ss_pred             ------eEEEEECCCCeeEeEE-ecCcceeeeEEEEEecCCcEEEEEeCC-----------CeEEEEcCCCCeEE--EEe
Q psy14961        201 ------TCRLFDLRADKEVACY-KKDSILFGATSVDFSVSGRLLFAGYND-----------YTINVWDSLKCCRV--NHL  260 (320)
Q Consensus       201 ------~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~d-----------g~v~~wd~~~~~~~--~~~  260 (320)
                            .+.+||..+.+-.... ...........+.+.|++++++.|+.+           ..+.+||..+.+-.  ..+
T Consensus       427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~  506 (656)
T 1k3i_A          427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN  506 (656)
T ss_dssp             CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred             cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence                  6778887665422211 010111112345567899999998754           46889997654322  111


Q ss_pred             ecCCCceeEEEECcCCCeEEEecC-CC--ceEeeecchHhhhheee
Q psy14961        261 MGHENRVSCLQVSPDGTAFSSGSW-DT--TLRDEESKNRYVQYLLR  303 (320)
Q Consensus       261 ~~h~~~i~~i~~s~~~~~l~s~s~-D~--~ir~~~~~~~~~~~~~~  303 (320)
                      ......-.+..+.|||++|+.||. ++  ....++.+.....|++.
T Consensus       507 ~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~~~~~~e~~~Ppyl~~  552 (656)
T 1k3i_A          507 SIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYN  552 (656)
T ss_dssp             SSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGGBC
T ss_pred             CCccccccHhhcCCCcEEEecCCCCCCCCCCCeeEEEEEeChhhcc
Confidence            111222334566799999999985 22  34445544444455544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.87  E-value=1.1e-06  Score=72.05  Aligned_cols=166  Identities=11%  Similarity=0.093  Sum_probs=113.9

Q ss_pred             eEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeee
Q psy14961        111 MDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus       111 ~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~  173 (320)
                      ..+.+.   ++.++.+.+.+|  .|+.+|+.+++.+..+.-.....               -.++.+.++|..+.+.+.+
T Consensus        46 qGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t  122 (262)
T 3nol_A           46 EGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS  122 (262)
T ss_dssp             EEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred             ceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence            445554   355666777766  89999999999887664322111               1367889999999998888


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC---cceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---SILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      +......   ..++++++.|+....++.|.++|..+.+.+....-.   ........+.+. +|...+....++.|.+.|
T Consensus       123 i~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID  198 (262)
T 3nol_A          123 FNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID  198 (262)
T ss_dssp             EECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred             EECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence            7653322   344466777766666788999999988776655432   111223456665 787666666788999999


Q ss_pred             CCCCeEEEEeecC------------CCceeEEEECcCCCeEEEec
Q psy14961        251 SLKCCRVNHLMGH------------ENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       251 ~~~~~~~~~~~~h------------~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ..+++.+..+.-.            .+..+.|||+|+++.|...+
T Consensus       199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            9998887766421            23569999999877766665

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.82  E-value=1.4e-09  Score=95.43  Aligned_cols=166  Identities=14%  Similarity=0.106  Sum_probs=92.3

Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC-----------ccc--cCCCeEEEEECcCCeeeeeecCCCCC-eE-EE
Q psy14961        120 TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH-----------NLI--TDDKLVNIWDMRTGYCVQSFEGHQSD-VN-SV  184 (320)
Q Consensus       120 ~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~-----------~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~-v~-~v  184 (320)
                      ++..+++++.|+.|..||..+|+.+..+....           ..+  +.++.++.||.++++.+..+..+... +. +.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp   87 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP   87 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence            46799999999999999999998876664311           111  35788999999888776555433211 10 01


Q ss_pred             EEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC
Q psy14961        185 KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE  264 (320)
Q Consensus       185 ~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~  264 (320)
                      .+. .+..+++++.|+.+..||..+++.+..+....      ...++|++..+++++.++.|..||..+++.+-++..+.
T Consensus        88 ~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~  160 (369)
T 2hz6_A           88 CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD  160 (369)
T ss_dssp             CC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred             eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence            111 34568888889999999999988765443321      23456788899999999999999988776543332111


Q ss_pred             CceeEEEECcCC---CeEEEecCCCceEeeecc
Q psy14961        265 NRVSCLQVSPDG---TAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       265 ~~i~~i~~s~~~---~~l~s~s~D~~ir~~~~~  294 (320)
                        ....+++++.   ..++.++.|+.++.+|.+
T Consensus       161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~  191 (369)
T 2hz6_A          161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE  191 (369)
T ss_dssp             --ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred             --ccCccccCCccccceEEEECCCCEEEEEECC
Confidence              1233344432   456778899999999864

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.80  E-value=2.4e-08  Score=90.92  Aligned_cols=248  Identities=11%  Similarity=0.037  Sum_probs=147.9

Q ss_pred             CCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEe-c-CCCCEEEEEeC------------------CC
Q psy14961         29 PSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-P-NSDQQILTGSG------------------DC   87 (320)
Q Consensus        29 ~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~l~s~~~------------------dg   87 (320)
                      +||++++.... +..|.+.|++..+  .....++.. ....-.+.+ . +++++++++++                  ++
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t~~--~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~  175 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDVMK--CDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN  175 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTE--EEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred             cCCCEEEEEcCCCCEEEEEECCCce--EeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence            48887777655 4568888875321  111112221 122345555 4 78888888852                  45


Q ss_pred             eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC---------------eEEEEeCCCCcEEEEeccCCc
Q psy14961         88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK---------------LVNIWDMRTGYCVQSFEGHHN  152 (320)
Q Consensus        88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg---------------~i~lwd~~~~~~~~~~~~~~~  152 (320)
                      .+.+.|.++.+...++.... .-..+++  +++|+++++.+.+.               .+.+.|...... ..-.+...
T Consensus       176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~--spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~-~v~~Gk~~  251 (595)
T 1fwx_A          176 VFTAVDADKWEVAWQVLVSG-NLDNCDA--DYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK-AIAAGDYQ  251 (595)
T ss_dssp             EEEEEETTTTEEEEEEEESS-CCCCEEE--CSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH-HHHHTCSE
T ss_pred             eEEEEECCCCeEEEEEEeCC-CccceEE--CCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE-eccCCCee
Confidence            78899999888777765322 2233444  55789998887653               244554322110 00001111


Q ss_pred             cccCCCeEEEEECcC--Cee-eeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeE---------eEEecC
Q psy14961        153 LITDDKLVNIWDMRT--GYC-VQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEV---------ACYKKD  219 (320)
Q Consensus       153 ~~~~d~~i~iwd~~~--~~~-~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~---------~~~~~~  219 (320)
                      .+   +.|.+.|.++  +.. +..+.. .....++.++|||++++.++ .+.++.++|+.+.+..         ......
T Consensus       252 ~i---~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v  327 (595)
T 1fwx_A          252 EL---NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP  327 (595)
T ss_dssp             EE---TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred             EE---CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence            11   4488999987  444 344432 22446899999999876555 6889999999854210         000111


Q ss_pred             cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC----------CeEEEEeecCCCce-----eEEEECcCCCeEEEec-
Q psy14961        220 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK----------CCRVNHLMGHENRV-----SCLQVSPDGTAFSSGS-  283 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~----------~~~~~~~~~h~~~i-----~~i~~s~~~~~l~s~s-  283 (320)
                      ....+..-++|+|+|...++..-+++|..||...          ...+..+..|-.+-     .+++++|||++|+++- 
T Consensus       328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK  407 (595)
T ss_dssp             BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred             CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence            1223467789999994444556799999999765          44566666554432     3346689999999874 


Q ss_pred             --CCCc
Q psy14961        284 --WDTT  287 (320)
Q Consensus       284 --~D~~  287 (320)
                        .|+.
T Consensus       408 ~skdr~  413 (595)
T 1fwx_A          408 FSKDRF  413 (595)
T ss_dssp             CCTTSS
T ss_pred             CCcccc
Confidence              3554

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.79  E-value=5.6e-06  Score=67.81  Aligned_cols=182  Identities=10%  Similarity=0.037  Sum_probs=115.3

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~  146 (320)
                      ....+.|.. +..+.+.+.+|.|+++|+++++.+..+ . ........+.+.. +......-.++.+.++|..+.+.+.+
T Consensus        56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t  131 (268)
T 3nok_A           56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT  131 (268)
T ss_dssp             CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred             ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence            345677763 455667777889999999999887766 2 2333333334332 23333444566777777776665554


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---cee
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---ILF  223 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~  223 (320)
                      +.                           .....   ..++++++.|+.+..++.|.++|..+.+.+....-..   ...
T Consensus       132 i~---------------------------~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~  181 (268)
T 3nok_A          132 TR---------------------------YSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVE  181 (268)
T ss_dssp             EE---------------------------CSSCC---CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred             Ee---------------------------CCCce---eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccc
Confidence            42                           11111   2233567777777678899999999887766554321   111


Q ss_pred             eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-------------CCceeEEEECcCCCeEEEec
Q psy14961        224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-------------ENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-------------~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ....+.+. +|...+....+..|.+-|..+++.+..+.-.             .+..+.||++|+++.|...+
T Consensus       182 ~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          182 LINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             CEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             cccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            23456666 7876666667889999999998887665421             23669999999766555544

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.79  E-value=4.5e-06  Score=68.98  Aligned_cols=178  Identities=12%  Similarity=0.064  Sum_probs=119.6

Q ss_pred             eeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCC--c-----------cc--cCCCeEEEEECcCCeeee
Q psy14961        110 LMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHH--N-----------LI--TDDKLVNIWDMRTGYCVQ  172 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~--~-----------~~--~~d~~i~iwd~~~~~~~~  172 (320)
                      ...+.+.  +++.++++.+.  ++.|++.|+.+++.+..+.-..  .           .+  ..++.+.++|..+.+.+.
T Consensus        23 ~~Gl~~~--~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~  100 (266)
T 2iwa_A           23 TQGLVYA--ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK  100 (266)
T ss_dssp             EEEEEEC--STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred             cccEEEe--CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE
Confidence            3566664  44544444443  5789999999999887754111  0           00  146789999999998888


Q ss_pred             eecCC-CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---ceeeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961        173 SFEGH-QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---ILFGATSVDFSVSGRLLFAGYNDYTINV  248 (320)
Q Consensus       173 ~~~~~-~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~dg~v~~  248 (320)
                      ++..- ..   ...++++|+.++.+..++.+.++|..+.+......-..   .......+.|. +|...+....++.|.+
T Consensus       101 ~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v  176 (266)
T 2iwa_A          101 NFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR  176 (266)
T ss_dssp             EEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred             EEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence            87533 22   23466678777666678899999999877665554221   11124566777 7766666667889999


Q ss_pred             EcCCCCeEEEEeecC-------------CCceeEEEECcCCC-eEEEecCCCceEeeec
Q psy14961        249 WDSLKCCRVNHLMGH-------------ENRVSCLQVSPDGT-AFSSGSWDTTLRDEES  293 (320)
Q Consensus       249 wd~~~~~~~~~~~~h-------------~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~  293 (320)
                      -|..+++.+.++.-.             ....+.|+|+|+++ +++++....++.+-+.
T Consensus       177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l  235 (266)
T 2iwa_A          177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL  235 (266)
T ss_dssp             EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred             EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence            999998887776421             13569999999876 5666667777766554

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.79  E-value=3.3e-07  Score=78.27  Aligned_cols=245  Identities=11%  Similarity=0.064  Sum_probs=142.3

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  103 (320)
                      +...+.++. |..++.++.+..|| .... .   ..........+.++....++ .++.++.+  +..+|. +++.+..+
T Consensus        24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~-~---~~~~~~~~~~~~~~~~~~~g-~l~v~t~~--l~~~d~-~g~~~~~~   93 (330)
T 3hxj_A           24 SPILAKNGT-IYLGSSNKNLYAIN-TDGS-V---KWFFKSGEIIECRPSIGKDG-TIYFGSDK--VYAINP-DGTEKWRF   93 (330)
T ss_dssp             CCEECTTSC-EECSSTTTTTEEEC-TTSC-E---EESSCGGGEEEECCEETTTT-EECCSSCE--EEEECC-CGGGGGGS
T ss_pred             CceEccCCe-EEEEcCCCEEEEEC-CCCc-E---EEEEecCCCcccceEEecCC-cEEEecCc--EEEECC-CCcEEEEE
Confidence            445566664 55666778888887 3211 1   11122233334555554444 56666655  888886 56555444


Q ss_pred             ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------------ccCCCeEEEEECcCCe
Q psy14961        104 HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--------------ITDDKLVNIWDMRTGY  169 (320)
Q Consensus       104 ~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--------------~~~d~~i~iwd~~~~~  169 (320)
                      ...........+.    +..+..++.++.|..+|.. ++...........              .+.++.+..+|.. ++
T Consensus        94 ~~~~~~~~~~~~~----~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~  167 (330)
T 3hxj_A           94 DTKKAIVSDFTIF----EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GT  167 (330)
T ss_dssp             CC-----CCEEEE----TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SC
T ss_pred             ECCCCcccCceEE----CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CC
Confidence            3322222223332    3578888889999999988 6655444322111              1234678888887 66


Q ss_pred             eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961        170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVW  249 (320)
Q Consensus       170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~w  249 (320)
                      ....+......+.++...+++..++..   +.+..+| .+++....+....  ..+.++.++++|. |..++.++.+..+
T Consensus       168 ~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~~g~-l~v~t~~~gl~~~  240 (330)
T 3hxj_A          168 EKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY--WTVTRPAISEDGT-IYVTSLDGHLYAI  240 (330)
T ss_dssp             EEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS--CCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred             EeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC--cceeceEECCCCe-EEEEcCCCeEEEE
Confidence            665555455567777887888755444   7789999 5655544333221  1234556677775 5556667788888


Q ss_pred             cCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        250 DSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       250 d~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      |. ++..+..+......+..+.+.+++. |..++.++.+..++.
T Consensus       241 ~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          241 NP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP  282 (330)
T ss_dssp             CT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred             CC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence            74 4445544544444456677777775 455677777777774

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.75  E-value=1.7e-05  Score=67.69  Aligned_cols=256  Identities=9%  Similarity=-0.002  Sum_probs=135.0

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc-c--------------cccccccCeEEEEecCCCCEEEEEeCC
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK-K--------------TVATHTSFISCCIFPNSDQQILTGSGD   86 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-~--------------~~~~h~~~v~~~~~~~~~~~l~s~~~d   86 (320)
                      -.+++++++|+++.++..++.|..|+........... .              ...........+.+.+++..|+.+...
T Consensus        21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~  100 (322)
T 2fp8_A           21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY  100 (322)
T ss_dssp             CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred             ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence            3578899999878888888888888754211100000 0              000011235677777634466666666


Q ss_pred             CeEEEEECCCcceeeecccC-c----cceeEEEEeeCC-CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         87 CTCALWDVESSQLLQSFHGH-T----GELMDLDLAPSE-TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        87 g~v~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~-~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                      +.+..+|..++... .+... .    .....+++  .+ +|+          +.+-|.........+..........+.+
T Consensus       101 ~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~--d~~~G~----------l~v~d~~~~~~~~~~~~~~~~~~~~g~v  167 (322)
T 2fp8_A          101 YHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTV--DQRTGI----------VYFTDVSTLYDDRGVQQIMDTSDKTGRL  167 (322)
T ss_dssp             TEEEEECTTCEECE-EEESEETTEECSCEEEEEE--CTTTCC----------EEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred             CCEEEEeCCCCEEE-EecccCCCCcccccceEEE--ecCCCE----------EEEECCcccccccccceehcccCCCceE
Confidence            66888887765421 11100 0    11222322  33 444          3333322100000000000000123456


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCe--eEeEEecCcceeeeEEEEEecCCcEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADK--EVACYKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      ..+|..+++......+ ....+.++++|+|+.|+.+ ..++.|..+++....  ....+....   +...++++++|.+.
T Consensus       168 ~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---gP~gi~~d~~G~l~  243 (322)
T 2fp8_A          168 IKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---NPGNIKRNADGHFW  243 (322)
T ss_dssp             EEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---SEEEEEECTTSCEE
T ss_pred             EEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---CCCCeEECCCCCEE
Confidence            6666655443221111 1234579999999866544 567899999987421  111111111   14668899999877


Q ss_pred             EEEeC----------CCeEEEEcCCCCeEEEEeecC----CCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        238 FAGYN----------DYTINVWDSLKCCRVNHLMGH----ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       238 ~~g~~----------dg~v~~wd~~~~~~~~~~~~h----~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ++...          .+.|..+|.. ++.+..+...    ...++++++ .+++++++...+..|..++....
T Consensus       244 va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~  314 (322)
T 2fp8_A          244 VSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK  314 (322)
T ss_dssp             EEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred             EEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence            66554          4678888864 5555555433    245777777 57777787778888888886544

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.74  E-value=4.9e-06  Score=73.41  Aligned_cols=200  Identities=9%  Similarity=0.037  Sum_probs=120.1

Q ss_pred             EEEEEcCCCCEEEEecCC------CeEEEEEecccCCccccccccc--cc-ccCeEEEEecCCCCEEEEEe---------
Q psy14961         23 MACAYAPSGSVVASGGLD------NKVTVYAIALEDDSSAKKKTVA--TH-TSFISCCIFPNSDQQILTGS---------   84 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~d------g~i~v~~~~~~~~~~~~~~~~~--~h-~~~v~~~~~~~~~~~l~s~~---------   84 (320)
                      ..+..+|+| +++++..+      |.+.++|....    ....+..  .. ...-..++|+++.+.+++..         
T Consensus       141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~----~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~  215 (462)
T 2ece_A          141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF----EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED  215 (462)
T ss_dssp             EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC----CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred             cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC----eEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence            345677999 66665444      67888876421    1112221  11 12234578899998888874         


Q ss_pred             ----------CCCeEEEEECCCcceeeecccC-c-cceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEE
Q psy14961         85 ----------GDCTCALWDVESSQLLQSFHGH-T-GELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        85 ----------~dg~v~iwd~~~~~~~~~~~~~-~-~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~  146 (320)
                                .+.+|.+||+.+++.++.+... . .....+.|..++++++++.++.      ++.|.+|....+..   
T Consensus       216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~---  292 (462)
T 2ece_A          216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW---  292 (462)
T ss_dssp             CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE---
T ss_pred             ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce---
Confidence                      3689999999988877776642 1 2233455666888998887774      55787776543321   


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeec-------CCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCC---eeEeE
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFE-------GHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRAD---KEVAC  215 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~---~~~~~  215 (320)
                                 ..+.+.|+.+......+.       +-......|.++|||++|+.+.. .+.|.++|+...   +.+..
T Consensus       293 -----------~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~  361 (462)
T 2ece_A          293 -----------NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGK  361 (462)
T ss_dssp             -----------EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred             -----------eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEE
Confidence                       112233332221111110       00134567899999999866654 789999998532   33333


Q ss_pred             EecCcc------------eeeeEEEEEecCCcEEEEEe
Q psy14961        216 YKKDSI------------LFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       216 ~~~~~~------------~~~~~~~~~s~~~~~l~~g~  241 (320)
                      ......            ......+.++|||++|+++.
T Consensus       362 I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          362 VKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             EECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             EEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            322100            01246788999999998887

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.69  E-value=2e-05  Score=63.87  Aligned_cols=177  Identities=14%  Similarity=0.095  Sum_probs=115.7

Q ss_pred             eeeecccCccc--eeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccc---------------cCCCe
Q psy14961         99 LLQSFHGHTGE--LMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLI---------------TDDKL  159 (320)
Q Consensus        99 ~~~~~~~~~~~--v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~  159 (320)
                      .+..+ .|...  ...+.+..   +.+..+.+.+|  .|+.+|+.+++.+....-.....               -.++.
T Consensus        11 v~~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~   86 (243)
T 3mbr_X           11 VVKRY-PHDTTAFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE   86 (243)
T ss_dssp             EEEEE-ECCTTCCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred             EEEEc-CCCCccccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE
Confidence            34444 35433  33566642   44555666654  89999999999887664222110               24678


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---ceeeeEEEEEecCCcE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---ILFGATSVDFSVSGRL  236 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~  236 (320)
                      +.++|..+.+.+.++......   ..+.+++..|+.+..++.|.++|..+.+.+...+-..   .......+.+. +|..
T Consensus        87 v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l  162 (243)
T 3mbr_X           87 GFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL  162 (243)
T ss_dssp             EEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred             EEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence            999999999998888754333   2334567666666668899999999887765554321   11123445544 7776


Q ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeec-------------CCCceeEEEECcCCCeEEEec
Q psy14961        237 LFAGYNDYTINVWDSLKCCRVNHLMG-------------HENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       237 l~~g~~dg~v~~wd~~~~~~~~~~~~-------------h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      .+....+..|.+-|..+++.+..+.-             -.+..+.||++|+++.|...+
T Consensus       163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            66666788999999999888776641             123569999999777666555

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.64  E-value=4e-05  Score=63.31  Aligned_cols=197  Identities=10%  Similarity=0.069  Sum_probs=121.7

Q ss_pred             ceEEEEEcCCCCEEEEecC--CCeEEEEEecccCCcccccccc--cccccCeEEEEecCCCCEEEEEe-CCCeEEEEECC
Q psy14961         21 WVMACAYAPSGSVVASGGL--DNKVTVYAIALEDDSSAKKKTV--ATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVE   95 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~--dg~i~v~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~   95 (320)
                      +...++|++++.+.++.+.  ++.|.++|+....    ....+  ..+... -.+.+.  ++.++.+. .++.+.++|..
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~----v~~~i~l~~~~fg-eGi~~~--g~~lyv~t~~~~~v~viD~~   94 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK----VENIHKMDDSYFG-EGLTLL--NEKLYQVVWLKNIGFIYDRR   94 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC----EEEEEECCTTCCE-EEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC----EEEEEecCCCcce-EEEEEe--CCEEEEEEecCCEEEEEECC
Confidence            5689999998765555543  5789999875322    11121  122111 123332  44565554 57899999999


Q ss_pred             CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      +.+.+..+......-  ..+++  +|+.++.+..++.|.++|..+.+.+..+.-..               .++      
T Consensus        95 t~~v~~~i~~g~~~g--~glt~--Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~---------------~~~------  149 (266)
T 2iwa_A           95 TLSNIKNFTHQMKDG--WGLAT--DGKILYGSDGTSILYEIDPHTFKLIKKHNVKY---------------NGH------  149 (266)
T ss_dssp             TTEEEEEEECCSSSC--CEEEE--CSSSEEEECSSSEEEEECTTTCCEEEEEECEE---------------TTE------
T ss_pred             CCcEEEEEECCCCCe--EEEEE--CCCEEEEECCCCeEEEEECCCCcEEEEEEECC---------------CCc------
Confidence            998888776331211  23444  46667666678889999988876555432000               000      


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-----------eeeeEEEEEecCCcEE-EEEeCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-----------LFGATSVDFSVSGRLL-FAGYND  243 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~s~~~~~l-~~g~~d  243 (320)
                       .-..++.+.|. +|..++....++.|.+.|..+++.+..+.....           ......++|+|+++.+ +++...
T Consensus       150 -p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~  227 (266)
T 2iwa_A          150 -RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW  227 (266)
T ss_dssp             -ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred             -ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence             11135678888 675556665688999999999988776653211           1134689999998755 555567


Q ss_pred             CeEEEEcC
Q psy14961        244 YTINVWDS  251 (320)
Q Consensus       244 g~v~~wd~  251 (320)
                      +.+..-++
T Consensus       228 ~~v~~i~l  235 (266)
T 2iwa_A          228 PKLFEIKL  235 (266)
T ss_dssp             SEEEEEEE
T ss_pred             CeEEEEEE
Confidence            77777664

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.64  E-value=9.2e-05  Score=62.66  Aligned_cols=235  Identities=11%  Similarity=0.019  Sum_probs=127.7

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-C-eEEEEECCCc
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-C-TCALWDVESS   97 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g-~v~iwd~~~~   97 (320)
                      .+...++++++|+++++-..++.|..++.+.  . ..  . ..........+.+.++++.+++.... + .|..++..++
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g--~-~~--~-~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g  105 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG--N-QQ--I-HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG  105 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC--C-EE--E-EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCC--c-eE--E-EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence            4567899999999777776788888886532  1 11  1 11112346678888888755554332 2 4666777666


Q ss_pred             ceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-EEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         98 QLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        98 ~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      +....... .......++.  .+++..+++-..++.|..+|...+.. +....+..              ...    ...
T Consensus       106 ~~~~~~~~~~~~~~~g~~~--~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~--------------~~~----~~~  165 (306)
T 2p4o_A          106 TVETLLTLPDAIFLNGITP--LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML--------------ARS----NSE  165 (306)
T ss_dssp             CEEEEEECTTCSCEEEEEE--SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG--------------SCS----STT
T ss_pred             eEEEEEeCCCccccCcccc--cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc--------------ccc----ccc
Confidence            64322211 1111122322  22333333333577777777654321 11110000              000    000


Q ss_pred             CCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC-Cee--EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        176 GHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA-DKE--VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                      +.-...+.+  +|+++.| ++-...+.|..+++.. ++.  ...+...   .....++++++|.++++....+.|..+|.
T Consensus       166 ~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~  240 (306)
T 2p4o_A          166 SVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAP  240 (306)
T ss_dssp             CCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred             CCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence            111133455  7888766 4555678999999874 221  1111111   12356789999988777777889999996


Q ss_pred             CCCeEE--EEeecCCCceeEEEEC---cCCCeEEEecCCC
Q psy14961        252 LKCCRV--NHLMGHENRVSCLQVS---PDGTAFSSGSWDT  286 (320)
Q Consensus       252 ~~~~~~--~~~~~h~~~i~~i~~s---~~~~~l~s~s~D~  286 (320)
                      . +...  ..........++++|.   ||++.|..++..+
T Consensus       241 ~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          241 D-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             T-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             C-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence            5 4332  1222233568999999   8877666555433

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.60  E-value=9.2e-06  Score=76.64  Aligned_cols=217  Identities=14%  Similarity=0.171  Sum_probs=134.3

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccc-eeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEecc
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGE-LMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSFEG  149 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~~~  149 (320)
                      +..++.++.|+.+..+|..+++.+..+...... ...+...|.-.+..++.++.      ++.|..+|..+|+.+..+..
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  196 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence            567888999999999999999988766532110 00000011001346666543      58999999999988776642


Q ss_pred             C---C----------------------------------------ccc---cCCC-------------------eEEEEE
Q psy14961        150 H---H----------------------------------------NLI---TDDK-------------------LVNIWD  164 (320)
Q Consensus       150 ~---~----------------------------------------~~~---~~d~-------------------~i~iwd  164 (320)
                      .   .                                        ..+   +.++                   .|..+|
T Consensus       197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD  276 (668)
T 1kv9_A          197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR  276 (668)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence            1   0                                        000   0111                   377788


Q ss_pred             CcCCeeeeeecC--CC-------CCeEEEEEcCCCC---EEEEeeCCCeEEEEECCCCeeEeEEecCcce----------
Q psy14961        165 MRTGYCVQSFEG--HQ-------SDVNSVKFHPSGD---AVATGSDDATCRLFDLRADKEVACYKKDSIL----------  222 (320)
Q Consensus       165 ~~~~~~~~~~~~--~~-------~~v~~v~~~p~g~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----------  222 (320)
                      .++++..-.++.  |.       .+.....+..+|+   .++.++.+|.+.++|..+++.+...+.....          
T Consensus       277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g  356 (668)
T 1kv9_A          277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG  356 (668)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred             CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence            888887765543  22       2333333334665   6889999999999999999876433211100          


Q ss_pred             -----------------e-------eeEEEEEecCCcEEEEEe------------------------------------C
Q psy14961        223 -----------------F-------GATSVDFSVSGRLLFAGY------------------------------------N  242 (320)
Q Consensus       223 -----------------~-------~~~~~~~s~~~~~l~~g~------------------------------------~  242 (320)
                                       +       .-..++++|+..+++...                                    .
T Consensus       357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~  436 (668)
T 1kv9_A          357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV  436 (668)
T ss_dssp             CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred             CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence                             0       001267888877666521                                    2


Q ss_pred             CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        243 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       243 dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      +|.|..||..+++.+=+...+ .+.....+...+.+++.++.|+.++.+|.+
T Consensus       437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~  487 (668)
T 1kv9_A          437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSAD  487 (668)
T ss_dssp             EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred             cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence            378999999888776444322 233334445567788889999999999964

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.56  E-value=1.3e-05  Score=75.71  Aligned_cols=245  Identities=14%  Similarity=0.151  Sum_probs=144.2

Q ss_pred             CCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEE-EEecCCCCEEEEEeC------CCeEEEEECCCcceeee
Q psy14961         31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISC-CIFPNSDQQILTGSG------DCTCALWDVESSQLLQS  102 (320)
Q Consensus        31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~-~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~  102 (320)
                      +..|+.++.|+.+..+|....+..... ..... ....+.+ -..  .+..++.+..      +|.|..+|..+++.+..
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~-~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~  193 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQ-QTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR  193 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEE-ECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeee-ccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence            456778888999988887533222111 11000 0000110 001  1345665543      58999999999998876


Q ss_pred             cccCcc------------------------------cee-EEEEeeCCCCCEEEEEeCCC-------------------e
Q psy14961        103 FHGHTG------------------------------ELM-DLDLAPSETGNTFVSGSSDK-------------------L  132 (320)
Q Consensus       103 ~~~~~~------------------------------~v~-~~~~~~~~~~~~l~s~~~dg-------------------~  132 (320)
                      +.....                              .++ .+++  +++...++.++.++                   .
T Consensus       194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~--d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~  271 (668)
T 1kv9_A          194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAY--DPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS  271 (668)
T ss_dssp             EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEE--ETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred             ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEE--cCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence            642100                              011 1233  33456888887766                   3


Q ss_pred             EEEEeCCCCcEEEEeccC--C--------c---------------c--ccCCCeEEEEECcCCeeeeeecCCC-------
Q psy14961        133 VNIWDMRTGYCVQSFEGH--H--------N---------------L--ITDDKLVNIWDMRTGYCVQSFEGHQ-------  178 (320)
Q Consensus       133 i~lwd~~~~~~~~~~~~~--~--------~---------------~--~~~d~~i~iwd~~~~~~~~~~~~~~-------  178 (320)
                      |..+|..+|+.+..++..  .        .               +  ...++.++++|.++++.+...+...       
T Consensus       272 v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~  351 (668)
T 1kv9_A          272 ILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKV  351 (668)
T ss_dssp             EEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEE
T ss_pred             EEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccc
Confidence            999999999887666431  0        0               0  1256788999999998774332111       


Q ss_pred             -----CCe------------------------EEEEEcCCCCEEEEe---------------------------------
Q psy14961        179 -----SDV------------------------NSVKFHPSGDAVATG---------------------------------  196 (320)
Q Consensus       179 -----~~v------------------------~~v~~~p~g~~l~s~---------------------------------  196 (320)
                           .++                        ..++++|+...++..                                 
T Consensus       352 d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  431 (668)
T 1kv9_A          352 DLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDV  431 (668)
T ss_dssp             CTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCC
T ss_pred             ccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCC
Confidence                 000                        126788876665531                                 


Q ss_pred             ---eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce-eEEEE
Q psy14961        197 ---SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV-SCLQV  272 (320)
Q Consensus       197 ---s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i-~~i~~  272 (320)
                         ..+|.|.-||+.+++.+-.++......   ...+...+.++++|+.+|.++.||..+++.+..+....... .-+.+
T Consensus       432 p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~---~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~  508 (668)
T 1kv9_A          432 PAAVVSGALLAWDPVKQKAAWKVPYPTHWN---GGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF  508 (668)
T ss_dssp             CGGGCEEEEEEEETTTTEEEEEEEESSSCC---CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred             CCCCccceEEEEeCCCCcEEEEccCCCCCc---CceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE
Confidence               134889999999998765554332211   12344568889999999999999999998887775443211 33445


Q ss_pred             CcCCCe-EEEec
Q psy14961        273 SPDGTA-FSSGS  283 (320)
Q Consensus       273 s~~~~~-l~s~s  283 (320)
                      ..+|++ ++.++
T Consensus       509 ~~~G~~yva~~~  520 (668)
T 1kv9_A          509 ELAGRQYVAIMA  520 (668)
T ss_dssp             EETTEEEEEEEE
T ss_pred             EECCEEEEEEEe
Confidence            567774 44443

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.52  E-value=7e-05  Score=69.26  Aligned_cols=214  Identities=16%  Similarity=0.127  Sum_probs=132.5

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCcc----ceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEE
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTG----ELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~  146 (320)
                      +..++.++.|+.+..+|..+++.+..+.....    .+.+   .|.-.+..++.++.      ++.|..+|..+|+.+..
T Consensus       115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~---~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~  191 (571)
T 2ad6_A          115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQ---APFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR  191 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCS---CCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceecc---CCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence            56888888999999999999998766542210    1111   11001346666655      78999999999987765


Q ss_pred             eccCCc--------------------------------------------------cc---cC------------C----
Q psy14961        147 FEGHHN--------------------------------------------------LI---TD------------D----  157 (320)
Q Consensus       147 ~~~~~~--------------------------------------------------~~---~~------------d----  157 (320)
                      +.....                                                  .+   +.            +    
T Consensus       192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~  271 (571)
T 2ad6_A          192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT  271 (571)
T ss_dssp             EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred             EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence            532110                                                  00   00            1    


Q ss_pred             CeEEEEECcCCeeeeeecC--C--------CCCeEEEEEcCCCC---EEEEeeCCCeEEEEECCCCeeEeEEecCcc---
Q psy14961        158 KLVNIWDMRTGYCVQSFEG--H--------QSDVNSVKFHPSGD---AVATGSDDATCRLFDLRADKEVACYKKDSI---  221 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~--~--------~~~v~~v~~~p~g~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---  221 (320)
                      +.|..+|.++++.+-.++.  |        ..++ -+...++|+   .++.++.+|.+..+|..+++.+..++....   
T Consensus       272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w  350 (571)
T 2ad6_A          272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV  350 (571)
T ss_dssp             TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred             EEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence            2477888888887665532  2        1222 133334674   567888999999999999887655432210   


Q ss_pred             -----------e----------------ee-------eEEEEEecCCcEEEEEe--------------------------
Q psy14961        222 -----------L----------------FG-------ATSVDFSVSGRLLFAGY--------------------------  241 (320)
Q Consensus       222 -----------~----------------~~-------~~~~~~s~~~~~l~~g~--------------------------  241 (320)
                                 .                +.       -..++++|+..++++..                          
T Consensus       351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~  430 (571)
T 2ad6_A          351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA  430 (571)
T ss_dssp             EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred             cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence                       0                00       02357888887777654                          


Q ss_pred             -----------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        242 -----------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       242 -----------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                                 .+|.|..||..+++.+-++.. ...+....+...+.+++.++.|+.++.+|.++
T Consensus       431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t  494 (571)
T 2ad6_A          431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD  494 (571)
T ss_dssp             EEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred             eccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence                       247889999888776644432 22232333333455667789999999999643

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.48  E-value=7.4e-05  Score=61.17  Aligned_cols=169  Identities=13%  Similarity=0.134  Sum_probs=113.7

Q ss_pred             eEEEEecCCCCEEEEEeCCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEE
Q psy14961         68 ISCCIFPNSDQQILTGSGDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCV  144 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~  144 (320)
                      ...+.|. ++..+.+++.+|  .|+.+|+.+++.+..+... .......+.+.  ++.|+... .++.+.++|..+.+.+
T Consensus        45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~  120 (262)
T 3nol_A           45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV  120 (262)
T ss_dssp             EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred             cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence            4567777 455556666666  9999999999988776542 33333334433  45666554 5789999999999888


Q ss_pred             EEeccCC-----------cccc-CCCeEEEEECcCCeeeeeecCC----C-CCeEEEEEcCCCCEEEEeeCCCeEEEEEC
Q psy14961        145 QSFEGHH-----------NLIT-DDKLVNIWDMRTGYCVQSFEGH----Q-SDVNSVKFHPSGDAVATGSDDATCRLFDL  207 (320)
Q Consensus       145 ~~~~~~~-----------~~~~-~d~~i~iwd~~~~~~~~~~~~~----~-~~v~~v~~~p~g~~l~s~s~dg~i~iwd~  207 (320)
                      .++.-..           ..++ ....|.++|..+.+.+.++.-.    . ..++.+.|. +|..++..-.+..|.+.|.
T Consensus       121 ~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp  199 (262)
T 3nol_A          121 RSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDP  199 (262)
T ss_dssp             EEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECT
T ss_pred             EEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEEC
Confidence            7765211           1112 2456889999888777665431    1 345678887 6766666667889999999


Q ss_pred             CCCeeEeEEecCcc----------eeeeEEEEEecCCcEEEEEe
Q psy14961        208 RADKEVACYKKDSI----------LFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       208 ~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~l~~g~  241 (320)
                      .+++.+..+.....          ......++++|++..|++.+
T Consensus       200 ~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          200 ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            99988776654211          11346799999887766655

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.48  E-value=0.00034  Score=57.71  Aligned_cols=222  Identities=7%  Similarity=0.015  Sum_probs=124.3

Q ss_pred             ccceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCC
Q psy14961         19 ATWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~   96 (320)
                      ......+++++++..|. +-...+.|..++++....    .............+.+.++++.++.+. ..+.|.+++++.
T Consensus        35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g  110 (267)
T 1npe_A           35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (267)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence            34567899999765554 445568899998753211    111111113456778877666666554 467999999865


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeC---CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS---DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      ................+++.+  ++..|+.+..   .+.|..+++.... ...                        +  
T Consensus       111 ~~~~~~~~~~~~~P~~i~vd~--~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~------------------------~--  161 (267)
T 1npe_A          111 TQRRVLFDTGLVNPRGIVTDP--VRGNLYWTDWNRDNPKIETSHMDGTN-RRI------------------------L--  161 (267)
T ss_dssp             CSCEEEECSSCSSEEEEEEET--TTTEEEEEECCSSSCEEEEEETTSCC-CEE------------------------E--
T ss_pred             CCEEEEEECCCCCccEEEEee--CCCEEEEEECCCCCcEEEEEecCCCC-cEE------------------------E--
Confidence            432211111112344555543  3445554443   2456555543211 000                        0  


Q ss_pred             ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      ..........++++|++..| ++-...+.|..+|+.............   .+..+++. .+.++++....+.|..+|..
T Consensus       162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~---~P~gi~~d-~~~lyva~~~~~~v~~~d~~  237 (267)
T 1npe_A          162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ---YPFAVTSY-GKNLYYTDWKTNSVIAMDLA  237 (267)
T ss_dssp             ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC---SEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred             EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCC---CceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence            00111245789999987766 455567899999987543322222111   12344443 34444444467899999998


Q ss_pred             CCeEEEEeecCC-CceeEEEECcCCC
Q psy14961        253 KCCRVNHLMGHE-NRVSCLQVSPDGT  277 (320)
Q Consensus       253 ~~~~~~~~~~h~-~~i~~i~~s~~~~  277 (320)
                      +++.+.++.... .....|++.|++-
T Consensus       238 ~g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          238 ISKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             TTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             CCCceEEEccccccccceeeecCccC
Confidence            888777765433 2467888888764

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.45  E-value=9e-05  Score=60.70  Aligned_cols=188  Identities=10%  Similarity=0.008  Sum_probs=116.8

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc-ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT-VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      ..+...+.|+ ++.+..+.+.+|.|+++|+...+.    ... +.... .--.+... .+...+..-.++.+.+||.++.
T Consensus        54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv----~~~~l~~~~-FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl  126 (268)
T 3nok_A           54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP----VWMERLGNI-FAEGLASD-GERLYQLTWTEGLLFTWSGMPP  126 (268)
T ss_dssp             TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC----SEEEECTTC-CEEEEEEC-SSCEEEEESSSCEEEEEETTTT
T ss_pred             ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE----EeEECCCCc-ceeEEEEe-CCEEEEEEccCCEEEEEECCcC
Confidence            3467788897 466778888889999988754322    112 22110 11113332 2334444456899999999999


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCC
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH  177 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~  177 (320)
                      +.+..+... ..-+.++  +  ++..|+.+..++.|.++|..+.+.+..+.-.             +  .+..       
T Consensus       127 ~~~~ti~~~-~eGwGLt--~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~-------------~--~g~~-------  179 (268)
T 3nok_A          127 QRERTTRYS-GEGWGLC--Y--WNGKLVRSDGGTMLTFHEPDGFALVGAVQVK-------------L--RGQP-------  179 (268)
T ss_dssp             EEEEEEECS-SCCCCEE--E--ETTEEEEECSSSEEEEECTTTCCEEEEEECE-------------E--TTEE-------
T ss_pred             cEEEEEeCC-CceeEEe--c--CCCEEEEECCCCEEEEEcCCCCeEEEEEEeC-------------C--CCcc-------
Confidence            998888753 2223443  2  4677777777889999998887766544210             0  0111       


Q ss_pred             CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-----------ceeeeEEEEEecCCcEEEEEe
Q psy14961        178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-----------ILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~g~  241 (320)
                      -..++.+.|. +|..++....+..|.+.|..+++.+..+....           .......++++|++..|++.+
T Consensus       180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          180 VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            1135667777 67666666678899999999998876665321           111346799999766544433

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.44  E-value=0.00038  Score=64.55  Aligned_cols=210  Identities=16%  Similarity=0.132  Sum_probs=126.3

Q ss_pred             EEEEeCCCeEEEEECCCcceeeecccCcc----ceeE-EEEeeCCCCCEEEEEe------CCCeEEEEeCCCCcEEEEec
Q psy14961         80 ILTGSGDCTCALWDVESSQLLQSFHGHTG----ELMD-LDLAPSETGNTFVSGS------SDKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~~~l~s~~------~dg~i~lwd~~~~~~~~~~~  148 (320)
                      ++.++.|+.+..+|..+++.+........    .+.+ ..+.    +..++.++      .++.|..+|.++|+.+..+.
T Consensus       124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~----~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~  199 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV----KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY  199 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE----TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE----CCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence            88888999999999999998766542210    1111 1111    24666665      38999999999998876553


Q ss_pred             cCCcc----------------------------------------------------c-cCC----------------Ce
Q psy14961        149 GHHNL----------------------------------------------------I-TDD----------------KL  159 (320)
Q Consensus       149 ~~~~~----------------------------------------------------~-~~d----------------~~  159 (320)
                      .....                                                    + +.+                ..
T Consensus       200 ~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s  279 (599)
T 1w6s_A          200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT  279 (599)
T ss_dssp             SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred             CCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce
Confidence            22100                                                    0 011                36


Q ss_pred             EEEEECcCCeeeeeecC--CC--------CCeEEEEEc-CCC---CEEEEeeCCCeEEEEECCCCeeEeEEecCcc----
Q psy14961        160 VNIWDMRTGYCVQSFEG--HQ--------SDVNSVKFH-PSG---DAVATGSDDATCRLFDLRADKEVACYKKDSI----  221 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~--~~--------~~v~~v~~~-p~g---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----  221 (320)
                      |..+|.++++..-.++.  |.        .++. +... .+|   ..++.++.+|.+.++|..+++.+...+....    
T Consensus       280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~  358 (599)
T 1w6s_A          280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF  358 (599)
T ss_dssp             EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred             EEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence            77888888887655433  21        1221 2332 567   4677789999999999999887654432110    


Q ss_pred             ----------e-----------------------eeeEEEEEecCCcEEEEEe---------------------------
Q psy14961        222 ----------L-----------------------FGATSVDFSVSGRLLFAGY---------------------------  241 (320)
Q Consensus       222 ----------~-----------------------~~~~~~~~s~~~~~l~~g~---------------------------  241 (320)
                                .                       ..-..++++|+..++++..                           
T Consensus       359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~  438 (599)
T 1w6s_A          359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM  438 (599)
T ss_dssp             EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred             cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence                      0                       0012356777766665532                           


Q ss_pred             ------------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        242 ------------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       242 ------------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                                  ..|.+..||..+++.+=+.. +..++..-.....+.+++.++.|+.++.+|.++
T Consensus       439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t  503 (599)
T 1w6s_A          439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDT  503 (599)
T ss_dssp             EECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred             ccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCC
Confidence                        24678888888776553332 111222111223455677799999999998643

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.42  E-value=8.5e-05  Score=68.69  Aligned_cols=242  Identities=13%  Similarity=0.124  Sum_probs=139.7

Q ss_pred             CCEEEEecCCCeEEEEEecccCCcccccccccccc--cCeEE-EEecCCCCEEEEEeC------CCeEEEEECCCcceee
Q psy14961         31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT--SFISC-CIFPNSDQQILTGSG------DCTCALWDVESSQLLQ  101 (320)
Q Consensus        31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~--~~v~~-~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~  101 (320)
                      +..|+.++.|+.+..+|....+.....  .+..+.  ..+.+ ...  .+..+++++.      ++.|..+|..+++.+.
T Consensus       115 ~~~v~v~~~dg~l~alD~~tG~~~W~~--~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  190 (571)
T 2ad6_A          115 AGQIVKKQANGHLLALDAKTGKINWEV--EVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEE--ECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEe--cCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence            456777778888888886433221111  111110  01111 001  1345666654      7899999999998876


Q ss_pred             ecccCccc-------------------------------------e-eEEEEeeCCCCCEEEEEeCC-------------
Q psy14961        102 SFHGHTGE-------------------------------------L-MDLDLAPSETGNTFVSGSSD-------------  130 (320)
Q Consensus       102 ~~~~~~~~-------------------------------------v-~~~~~~~~~~~~~l~s~~~d-------------  130 (320)
                      .+......                                     + ..+++  +++...++.++.+             
T Consensus       191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~--d~~~g~vy~~~g~~~~~~~~~~~gd~  268 (571)
T 2ad6_A          191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAY--DPKLNLFYYGSGNPAPWNETMRPGDN  268 (571)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEE--ETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred             EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEE--cCCCCeEEEECCCCccccCCccCCCc
Confidence            65432110                                     0 01222  2233566665532             


Q ss_pred             ---CeEEEEeCCCCcEEEEeccCC----------c--------------c---ccCCCeEEEEECcCCeeeeeecCCC--
Q psy14961        131 ---KLVNIWDMRTGYCVQSFEGHH----------N--------------L---ITDDKLVNIWDMRTGYCVQSFEGHQ--  178 (320)
Q Consensus       131 ---g~i~lwd~~~~~~~~~~~~~~----------~--------------~---~~~d~~i~iwd~~~~~~~~~~~~~~--  178 (320)
                         +.|..+|..+|+.+..++...          .              .   ...++.+.++|.++++.+...+-..  
T Consensus       269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~  348 (571)
T 2ad6_A          269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAV  348 (571)
T ss_dssp             TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred             eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCc
Confidence               358899999888766553210          0              0   1235678888988888765543211  


Q ss_pred             -----------CCe--------------------------EEEEEcCCCCEEEEee------------------------
Q psy14961        179 -----------SDV--------------------------NSVKFHPSGDAVATGS------------------------  197 (320)
Q Consensus       179 -----------~~v--------------------------~~v~~~p~g~~l~s~s------------------------  197 (320)
                                 .++                          ..++++|+...++..+                        
T Consensus       349 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~  428 (571)
T 2ad6_A          349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT  428 (571)
T ss_dssp             CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred             cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence                       111                          2467888877776543                        


Q ss_pred             -------------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC
Q psy14961        198 -------------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE  264 (320)
Q Consensus       198 -------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~  264 (320)
                                   .+|.+..||+.+++.+-.++.......   ..+...+..++.++.+|.|..+|..+++.+-++....
T Consensus       429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~---~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~  505 (571)
T 2ad6_A          429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG---GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS  505 (571)
T ss_dssp             EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             ceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc---eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence                         357899999998887655543322211   1223346677889999999999999998887665332


Q ss_pred             C-ceeEEEECcCCCeEEE
Q psy14961        265 N-RVSCLQVSPDGTAFSS  281 (320)
Q Consensus       265 ~-~i~~i~~s~~~~~l~s  281 (320)
                      . .-.-+.+.++|++++.
T Consensus       506 ~~~~~p~~~~~~G~~yv~  523 (571)
T 2ad6_A          506 GGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             CCCSCCEEEEETTEEEEE
T ss_pred             CcEeeeEEEEECCEEEEE
Confidence            1 1223446678876554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.38  E-value=0.00039  Score=56.34  Aligned_cols=190  Identities=13%  Similarity=0.074  Sum_probs=115.0

Q ss_pred             CccceEEEEEcCCCCEEEEecCCC--eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE-EEeCCCeEEEEEC
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDN--KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL-TGSGDCTCALWDV   94 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg--~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~   94 (320)
                      +..++..+.|++ +.+..+.+.+|  .|+++|+...+.  .....+..+.-.. .+..  .++.|+ ..-.++.+.+||.
T Consensus        19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv--~~~~~l~~~~fge-Gi~~--~~~~ly~ltw~~~~v~v~D~   92 (243)
T 3mbr_X           19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI--LQRAEVPPPYFGA-GIVA--WRDRLIQLTWRNHEGFVYDL   92 (243)
T ss_dssp             TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE--EEEEECCTTCCEE-EEEE--ETTEEEEEESSSSEEEEEET
T ss_pred             CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE--EEEEeCCCCccee-EEEE--eCCEEEEEEeeCCEEEEEEC
Confidence            346788999987 56666766654  899998753211  1111121111111 1222  234444 4456899999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      ++.+.+..++... .-+.+  ++  ++..|+.+..++.|.++|..+.+.+..+.-.             +  .+.++   
T Consensus        93 ~tl~~~~ti~~~~-~Gwgl--t~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~-------------~--~g~~~---  149 (243)
T 3mbr_X           93 ATLTPRARFRYPG-EGWAL--TS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT-------------A--GGRPL---  149 (243)
T ss_dssp             TTTEEEEEEECSS-CCCEE--EE--CSSCEEEECSSSEEEEECTTTCCEEEEEECE-------------E--TTEEC---
T ss_pred             CcCcEEEEEeCCC-CceEE--ee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEc-------------c--CCccc---
Confidence            9999988887533 22344  33  3566666666888999999887766544210             0  01111   


Q ss_pred             cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-----------ceeeeEEEEEecCCcEEEEEe
Q psy14961        175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-----------ILFGATSVDFSVSGRLLFAGY  241 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~g~  241 (320)
                          ..++.+.+. +|..++....+..|.+.|..+++.+..+....           ..-....++++|++..|++.+
T Consensus       150 ----~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          150 ----DNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             ----CCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             ----ccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence                234666666 56666666567899999999998877665321           111346799999877655544

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.37  E-value=4.4e-05  Score=69.70  Aligned_cols=207  Identities=9%  Similarity=0.010  Sum_probs=125.8

Q ss_pred             CCCEEEEEeC-CCeEEEEECCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         76 SDQQILTGSG-DCTCALWDVESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        76 ~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                      ++++++.... +..|.+.|+.+.++...+.-. ......+.+...|+++++++++....= +  .+.++.+.      ..
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p-~--~~dg~~l~------~~  170 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETP-L--VNDGTNME------DV  170 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEE-S--SCSSSSTT------CG
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccc-c--CCCCcccc------cc
Confidence            5677776654 567999999998877744322 234566655322678898888643210 0  00111000      00


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---------------------------------
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA---------------------------------  200 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg---------------------------------  200 (320)
                      -..++.+.+.|..+.+...++.--. .-..++++|+|+++++.+.+.                                 
T Consensus       171 ~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk  249 (595)
T 1fwx_A          171 ANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD  249 (595)
T ss_dssp             GGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred             cccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence            1124456677777766665554211 224567888888877776543                                 


Q ss_pred             -----eEEEEECCC--Cee-EeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCe------------EEEE
Q psy14961        201 -----TCRLFDLRA--DKE-VACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCC------------RVNH  259 (320)
Q Consensus       201 -----~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~------------~~~~  259 (320)
                           .+.+.|..+  ++. +..++..   .....+.++|||+++++++ .+.+|.++|..+..            ...+
T Consensus       250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~  326 (595)
T 1fwx_A          250 YQELNGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE  326 (595)
T ss_dssp             SEEETTEEEEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred             eeEECcEEEEeCcccCCceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence                 355556554  222 2222211   1235688999999887765 67899999987542            2333


Q ss_pred             eecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        260 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       260 ~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      . .-......++|+|||...++.--|++|-+|+....
T Consensus       327 v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a  362 (595)
T 1fwx_A          327 P-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDA  362 (595)
T ss_dssp             C-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred             c-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHh
Confidence            2 22346789999999976778889999999997664

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.34  E-value=0.00045  Score=64.09  Aligned_cols=79  Identities=13%  Similarity=0.056  Sum_probs=50.6

Q ss_pred             CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCC
Q psy14961        198 DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDG  276 (320)
Q Consensus       198 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~  276 (320)
                      .+|.+.-||+.+++.+-..+......+   -.+...+.+++.|+.||.++.||..+++.+-++.-... ...-+.+..||
T Consensus       451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G  527 (599)
T 1w6s_A          451 GLGQIKAYNAITGDYKWEKMERFAVWG---GTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKG  527 (599)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred             CcCeEEEEECCCCCEEeEecCCCCccC---cceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCC
Confidence            347888899988876654433221111   11233567788899999999999999988866643322 22335666788


Q ss_pred             CeE
Q psy14961        277 TAF  279 (320)
Q Consensus       277 ~~l  279 (320)
                      +++
T Consensus       528 ~qy  530 (599)
T 1w6s_A          528 TQY  530 (599)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            753

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.30  E-value=0.00097  Score=54.93  Aligned_cols=229  Identities=9%  Similarity=0.016  Sum_probs=123.8

Q ss_pred             CEEEEecCCCeEEEEEecccCCcccc-cccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccc
Q psy14961         32 SVVASGGLDNKVTVYAIALEDDSSAK-KKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        32 ~~l~s~~~dg~i~v~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      .+|+.+.. +.|+.++++........ ...+.........+.+.++++.|+.+. .++.|..+++++......+......
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~   80 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence            34555443 46777776532211000 001111123345778887666666555 5689999998765443322222234


Q ss_pred             eeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        110 LMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      ...+++.+  ++..++ +-...+.|.++++...... .               +           ..........++++|
T Consensus        81 p~~ia~d~--~~~~lyv~d~~~~~I~~~~~~g~~~~-~---------------~-----------~~~~~~~P~~i~vd~  131 (267)
T 1npe_A           81 PEGIALDH--LGRTIFWTDSQLDRIEVAKMDGTQRR-V---------------L-----------FDTGLVNPRGIVTDP  131 (267)
T ss_dssp             EEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCE-E---------------E-----------ECSSCSSEEEEEEET
T ss_pred             ccEEEEEe--cCCeEEEEECCCCEEEEEEcCCCCEE-E---------------E-----------EECCCCCccEEEEee
Confidence            45566543  334444 4444567777776432110 0               0           000112457899999


Q ss_pred             CCCEEEEeeC---CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCC
Q psy14961        189 SGDAVATGSD---DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHE  264 (320)
Q Consensus       189 ~g~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~  264 (320)
                      ++..|+.+..   .+.|..++++.... ...... ....+..++++|++..|+.+. ..+.|..+|...........+ .
T Consensus       132 ~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~  208 (267)
T 1npe_A          132 VRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQD-NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-L  208 (267)
T ss_dssp             TTTEEEEEECCSSSCEEEEEETTSCCC-EEEECT-TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-C
T ss_pred             CCCEEEEEECCCCCcEEEEEecCCCCc-EEEEEC-CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-C
Confidence            7666544443   46888888764322 222111 122357789999877665554 567999999765433332322 2


Q ss_pred             CceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        265 NRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       265 ~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .....|++. ++.++++....+.|...+..
T Consensus       209 ~~P~gi~~d-~~~lyva~~~~~~v~~~d~~  237 (267)
T 1npe_A          209 QYPFAVTSY-GKNLYYTDWKTNSVIAMDLA  237 (267)
T ss_dssp             CSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred             CCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence            334567764 45556655566888888864

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.25  E-value=0.004  Score=59.87  Aligned_cols=260  Identities=8%  Similarity=0.023  Sum_probs=148.9

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc--ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT--VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      +...|.++..+++|.+-+ |..++-|..|+.............  -......|.++....++ .|-.|+.++-+..|+..
T Consensus       308 ~~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g-~lWiGt~~~Gl~~~~~~  385 (795)
T 4a2l_A          308 SQRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK-NLWIGTNDGGLNLYNPI  385 (795)
T ss_dssp             SSSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS-CEEEEESSSCEEEECTT
T ss_pred             CCCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC-CEEEEECCCCeEEEcCC
Confidence            346799999999997554 455566777765322111000000  01123457888776655 46667778789999987


Q ss_pred             Ccceeeeccc--------CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC----Cc-----------
Q psy14961         96 SSQLLQSFHG--------HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH----HN-----------  152 (320)
Q Consensus        96 ~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~----~~-----------  152 (320)
                      ++........        ....|.++..  +++|+.|..|+.++-|.++|..+++...-....    ..           
T Consensus       386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g  463 (795)
T 4a2l_A          386 TQRFTSYTLQEDESARGIGSNNIKAVYV--DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG  463 (795)
T ss_dssp             TCCEEEECCC------CCSCSCEEEEEE--ETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred             CCcEEEEecCCCCcccCCCCccEEEEEE--cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence            7654322111        1234655543  445664777888778999998876543221100    00           


Q ss_pred             --cccCCCeEEEEECcCCeeeeeec------CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec---Cc-
Q psy14961        153 --LITDDKLVNIWDMRTGYCVQSFE------GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK---DS-  220 (320)
Q Consensus       153 --~~~~d~~i~iwd~~~~~~~~~~~------~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~-  220 (320)
                        .+...+-+..||..+++......      -....|.++...++|...+... + -+..||..+++.  .+..   .. 
T Consensus       464 ~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~  539 (795)
T 4a2l_A          464 NLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSN  539 (795)
T ss_dssp             CEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCG
T ss_pred             CEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCC
Confidence              01111346677877654332211      1235789999999988666554 4 488888776554  2221   11 


Q ss_pred             -ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee---c-CCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        221 -ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM---G-HENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       221 -~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~---~-h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                       ....+.++..+++|.+.++ +..| +..||..+.... .+.   + ..+.|.+|...++|++.+++ ..|..+
T Consensus       540 l~~~~i~~i~~d~~g~lWig-T~~G-l~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~Gl~~  609 (795)
T 4a2l_A          540 VTKLFTNCIYEASNGIIWVG-TREG-FYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSFGRLWLST-NRGISC  609 (795)
T ss_dssp             GGGSCEEEEEECTTSCEEEE-ESSC-EEEEETTTTEEE-EECGGGTCSCSCEEEEEECTTSCEEEEE-TTEEEE
T ss_pred             CCCCeeEEEEECCCCCEEEE-eCCC-ceeECCCCCcEE-EeCCCCCCchhheEEEEECCCCCEEEEc-CCceEE
Confidence             1113566777888886554 4344 777887654332 222   1 13468999999999887765 345444

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.23  E-value=0.0032  Score=58.21  Aligned_cols=216  Identities=13%  Similarity=0.086  Sum_probs=129.2

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCcc----cee-EEEEeeC-CCCC-EEEEEe------CCCeEEEEeCCCCcE
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTG----ELM-DLDLAPS-ETGN-TFVSGS------SDKLVNIWDMRTGYC  143 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~v~-~~~~~~~-~~~~-~l~s~~------~dg~i~lwd~~~~~~  143 (320)
                      +..++.++.|+.+..+|..+++.+..+.....    .+. ...+... .+|+ .+++++      .++.|..+|..+|+.
T Consensus       117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~  196 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE  196 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence            56788899999999999999998866543221    111 1111111 1233 566665      378999999999987


Q ss_pred             EEEeccCC-----------------------------------------------------ccc---c------------
Q psy14961        144 VQSFEGHH-----------------------------------------------------NLI---T------------  155 (320)
Q Consensus       144 ~~~~~~~~-----------------------------------------------------~~~---~------------  155 (320)
                      +.......                                                     ..+   +            
T Consensus       197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~  276 (582)
T 1flg_A          197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART  276 (582)
T ss_dssp             EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred             EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence            65442210                                                     000   0            


Q ss_pred             -C-------C----CeEEEEECcCCeeeeeecC--CC--------CCeEEEEEc-CCCC---EEEEeeCCCeEEEEECCC
Q psy14961        156 -D-------D----KLVNIWDMRTGYCVQSFEG--HQ--------SDVNSVKFH-PSGD---AVATGSDDATCRLFDLRA  209 (320)
Q Consensus       156 -~-------d----~~i~iwd~~~~~~~~~~~~--~~--------~~v~~v~~~-p~g~---~l~s~s~dg~i~iwd~~~  209 (320)
                       .       |    +.|..+|.++++..-.++.  |.        .++. +... .+|+   .++.++.+|.+.++|..+
T Consensus       277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t  355 (582)
T 1flg_A          277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN  355 (582)
T ss_dssp             CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred             cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence             1       1    4688888889887766532  31        1221 2222 4674   678899999999999999


Q ss_pred             CeeEeEEecCcce------------------------------------ee-------eEEEEEecCCcEEEEEe-----
Q psy14961        210 DKEVACYKKDSIL------------------------------------FG-------ATSVDFSVSGRLLFAGY-----  241 (320)
Q Consensus       210 ~~~~~~~~~~~~~------------------------------------~~-------~~~~~~s~~~~~l~~g~-----  241 (320)
                      ++.+..+......                                    +.       -..++++|+..++++..     
T Consensus       356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~  435 (582)
T 1flg_A          356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE  435 (582)
T ss_dssp             CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred             CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence            8876544332100                                    00       01345677665555433     


Q ss_pred             ----------------------------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        242 ----------------------------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       242 ----------------------------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                                                  .+|.|..||..+++.+=+...+ .++..-.....+.+++.|+.|+.++.+|.
T Consensus       436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~  514 (582)
T 1flg_A          436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDA  514 (582)
T ss_dssp             EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred             eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence                                        2578999998888765333322 12222112223557777999999999996


Q ss_pred             c
Q psy14961        294 K  294 (320)
Q Consensus       294 ~  294 (320)
                      +
T Consensus       515 ~  515 (582)
T 1flg_A          515 K  515 (582)
T ss_dssp             T
T ss_pred             C
Confidence            4

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.16  E-value=0.0035  Score=55.76  Aligned_cols=238  Identities=13%  Similarity=0.113  Sum_probs=127.7

Q ss_pred             eEEEEEcCC--CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC-----eEEEEEC
Q psy14961         22 VMACAYAPS--GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC-----TCALWDV   94 (320)
Q Consensus        22 V~~~~~~~~--~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~   94 (320)
                      -..++++|+  +..|..+...+.|+.++....     ....+.........+.+.++++ |+.+...+     .+...+.
T Consensus       141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-----~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~  214 (433)
T 4hw6_A          141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-----YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR  214 (433)
T ss_dssp             CCEEEECTTTTTCEEEEECBTSCEEEEETTTT-----EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred             CceEEEccccCCCEEEEEeCCCCEEEEECCCC-----EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence            357889985  334444444477888876311     1112222334467888999888 55554321     1233332


Q ss_pred             CCccee-eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         95 ESSQLL-QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        95 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      ..+... ..+. .......+++.+. +|.+.++-..++.|+.+|..++.....+               ...        
T Consensus       215 ~~~~~~~~~~~-~~~~P~giavd~~-~G~lyv~d~~~~~V~~~d~~~g~~~~~~---------------~~~--------  269 (433)
T 4hw6_A          215 ASGFTERLSLC-NARGAKTCAVHPQ-NGKIYYTRYHHAMISSYDPATGTLTEEE---------------VMM--------  269 (433)
T ss_dssp             GGTTCCEEEEE-ECSSBCCCEECTT-TCCEEECBTTCSEEEEECTTTCCEEEEE---------------EEC--------
T ss_pred             CCCeecccccc-ccCCCCEEEEeCC-CCeEEEEECCCCEEEEEECCCCeEEEEE---------------ecc--------
Confidence            221110 1111 1111223444321 4555445455667777777655432111               000        


Q ss_pred             ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC--Cee--EeEEecC-------------cceeeeEEEEE-----
Q psy14961        174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA--DKE--VACYKKD-------------SILFGATSVDF-----  230 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~--~~~--~~~~~~~-------------~~~~~~~~~~~-----  230 (320)
                        +....-..++|+|+|++| ++-...+.|..++++.  +..  ...+...             .....+..+++     
T Consensus       270 --~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~  347 (433)
T 4hw6_A          270 --DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEA  347 (433)
T ss_dssp             --SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGG
T ss_pred             --CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccc
Confidence              001122469999999955 5555678899988653  211  0011110             01122456888     


Q ss_pred             ----ecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC------------------CCceeEEEEC-cCCCeEEEecCCCc
Q psy14961        231 ----SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH------------------ENRVSCLQVS-PDGTAFSSGSWDTT  287 (320)
Q Consensus       231 ----s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h------------------~~~i~~i~~s-~~~~~l~s~s~D~~  287 (320)
                          .++|.+.++-...+.|+.++. .+ .+.++.+.                  -.....|+++ ++|.++++-..+..
T Consensus       348 y~~dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r  425 (433)
T 4hw6_A          348 YAGEEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHR  425 (433)
T ss_dssp             GTTSSCCEEEEEEETTTTEEEEECT-TS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred             ccccCCCCcEEEEECCCCEEEEECC-CC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCE
Confidence                677777777677889999985 34 33333321                  1236789999 68888888788888


Q ss_pred             eEeeecc
Q psy14961        288 LRDEESK  294 (320)
Q Consensus       288 ir~~~~~  294 (320)
                      ||..+.+
T Consensus       426 Ir~i~~e  432 (433)
T 4hw6_A          426 VRKIAPE  432 (433)
T ss_dssp             EEEEEEC
T ss_pred             EEEEecC
Confidence            9887754

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.15  E-value=0.0021  Score=57.09  Aligned_cols=237  Identities=11%  Similarity=0.086  Sum_probs=126.0

Q ss_pred             eEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-C----eEEEEECC
Q psy14961         22 VMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-C----TCALWDVE   95 (320)
Q Consensus        22 V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g----~v~iwd~~   95 (320)
                      -..++++| ++..|..+...+.|+.+|+...  .   ...+.........+.+.++++.|+.+... +    .+...+..
T Consensus       139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~--~---v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~  213 (430)
T 3tc9_A          139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE--Y---VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE  213 (430)
T ss_dssp             CCEEEEETTEEEEEEEEEBTEEEEEEETTTT--E---EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred             CCEEEECCCCCCeEEEEeCCCcEEEEECCCC--E---EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence            35788998 3555665555467777776321  1   11222233445678899988867766542 1    23334432


Q ss_pred             Cccee--eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         96 SSQLL--QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        96 ~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                       +...  ..+.. ......+++.+. +|.++++-..++.|..++...+....                +         ..
T Consensus       214 -g~~~~~~~l~~-~~~p~giavdp~-~g~lyv~d~~~~~V~~~~~~~~~~~~----------------~---------~~  265 (430)
T 3tc9_A          214 -SGFKVITELTK-GQNCNGAETHPI-NGELYFNSWNAGQVFRYDFTTQETTP----------------L---------FT  265 (430)
T ss_dssp             -GTSCSEEEEEE-CSSCCCEEECTT-TCCEEEEETTTTEEEEEETTTTEEEE----------------E---------EE
T ss_pred             -Cceeeeeeecc-CCCceEEEEeCC-CCEEEEEECCCCEEEEEECCCCcEEE----------------E---------EE
Confidence             2221  11111 112234444332 45555555556677777765433210                0         01


Q ss_pred             ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC--Cee--EeEEecC-------------cceeeeE-EEEEe---
Q psy14961        174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA--DKE--VACYKKD-------------SILFGAT-SVDFS---  231 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~--~~~--~~~~~~~-------------~~~~~~~-~~~~s---  231 (320)
                      .. ....-..++|+|+|++| ++-..++.|..++.+.  ++.  ...+...             ....... .+.+.   
T Consensus       266 ~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~  344 (430)
T 3tc9_A          266 IQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPA  344 (430)
T ss_dssp             CS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGG
T ss_pred             cC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccc
Confidence            11 11234689999999955 5555678899987653  211  1111110             0011122 34443   


Q ss_pred             -----cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC------------------CCceeEEEECc-CCCeEEEecCCCc
Q psy14961        232 -----VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH------------------ENRVSCLQVSP-DGTAFSSGSWDTT  287 (320)
Q Consensus       232 -----~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h------------------~~~i~~i~~s~-~~~~l~s~s~D~~  287 (320)
                           ++|.+.++=...+.|+.++. .+. +.++.+.                  -.....|+++| ++.++++-..+..
T Consensus       345 y~~~D~~g~lyvaD~~n~~I~~i~~-~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r  422 (430)
T 3tc9_A          345 YKGSSDEYDFYFCDRENHCIRILTP-QGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRR  422 (430)
T ss_dssp             GTTSSCCEEEEEEEGGGTEEEEECT-TSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred             ccccCCCCeEEEEECCCcEEEEECC-CCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCe
Confidence                 34555566566778999884 343 3233221                  12478999999 5777887777888


Q ss_pred             eEeeecc
Q psy14961        288 LRDEESK  294 (320)
Q Consensus       288 ir~~~~~  294 (320)
                      ||..+.+
T Consensus       423 Ir~i~~e  429 (430)
T 3tc9_A          423 IRKIGYE  429 (430)
T ss_dssp             EEEEEEC
T ss_pred             EEEEccC
Confidence            8877654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.08  E-value=0.0014  Score=55.41  Aligned_cols=115  Identities=10%  Similarity=0.003  Sum_probs=74.8

Q ss_pred             CeEEEEEcCCCCEEEEeeCC-CeEEEEECCCCeeEeEEec---CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        180 DVNSVKFHPSGDAVATGSDD-ATCRLFDLRADKEVACYKK---DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~d-g~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      ..+.++..++|+..++++.. +.|..++.+.......+..   .....+.+.++++|+|..|++....|.+.-+|+....
T Consensus       138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv  217 (334)
T 2p9w_A          138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY  217 (334)
T ss_dssp             EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred             CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence            47889999999999988887 8887777664422222211   1122446688999999988888779999999977533


Q ss_pred             E--EEEee--cC---CCceeEE-EECcCCCe-EEEecCCCceEeeecch
Q psy14961        256 R--VNHLM--GH---ENRVSCL-QVSPDGTA-FSSGSWDTTLRDEESKN  295 (320)
Q Consensus       256 ~--~~~~~--~h---~~~i~~i-~~s~~~~~-l~s~s~D~~ir~~~~~~  295 (320)
                      .  +. ..  +.   -.....| .--.+|+. |++.+..+.+.+.....
T Consensus       218 ~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          218 AWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN  265 (334)
T ss_dssp             CCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred             ceeec-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence            2  21 11  21   1233443 44457777 67776777766666555

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.08  E-value=0.0011  Score=56.33  Aligned_cols=186  Identities=12%  Similarity=0.099  Sum_probs=106.7

Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeeccc--------------------CccceeEEEEeeCCCCCEEEEEe
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG--------------------HTGELMDLDLAPSETGNTFVSGS  128 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~~~l~s~~  128 (320)
                      ..+.+.+++..++++..++.|..|+..++... .+..                    .......+++.+. ++ .|+.+.
T Consensus        22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~-~g-~l~v~d   98 (322)
T 2fp8_A           22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ-NN-QLYIVD   98 (322)
T ss_dssp             CCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT-TT-EEEEEE
T ss_pred             eEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCC-CC-cEEEEE
Confidence            34667777777888888999999998765432 1110                    0123455555321 34 455555


Q ss_pred             CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeC---------
Q psy14961        129 SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSD---------  198 (320)
Q Consensus       129 ~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~---------  198 (320)
                      ..+.|..+|..++.. ..+..               ...+.       .....+.+++.| +|+..++-..         
T Consensus        99 ~~~~i~~~d~~~g~~-~~~~~---------------~~~~~-------~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~  155 (322)
T 2fp8_A           99 CYYHLSVVGSEGGHA-TQLAT---------------SVDGV-------PFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ  155 (322)
T ss_dssp             TTTEEEEECTTCEEC-EEEES---------------EETTE-------ECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred             CCCCEEEEeCCCCEE-EEecc---------------cCCCC-------cccccceEEEecCCCEEEEECCcccccccccc
Confidence            555577777654321 11100               00000       112357799999 8887666432         


Q ss_pred             --------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCCe--EEEEeecCCCce
Q psy14961        199 --------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKCC--RVNHLMGHENRV  267 (320)
Q Consensus       199 --------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~--~~~~~~~h~~~i  267 (320)
                              ++.+..+|..+++.......   ......++++|+|+.|+.+ +..+.|..|+.....  ....+....+ .
T Consensus       156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P  231 (322)
T 2fp8_A          156 QIMDTSDKTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P  231 (322)
T ss_dssp             HHHHHTCCCEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E
T ss_pred             eehcccCCCceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C
Confidence                    36788888876653222111   1224568899999876665 456889999865310  1111111223 7


Q ss_pred             eEEEECcCCCeEEEecC
Q psy14961        268 SCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       268 ~~i~~s~~~~~l~s~s~  284 (320)
                      ..|++.++|++.++...
T Consensus       232 ~gi~~d~~G~l~va~~~  248 (322)
T 2fp8_A          232 GNIKRNADGHFWVSSSE  248 (322)
T ss_dssp             EEEEECTTSCEEEEEEE
T ss_pred             CCeEECCCCCEEEEecC
Confidence            88999999998777644

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.04  E-value=0.01  Score=56.86  Aligned_cols=263  Identities=7%  Similarity=-0.002  Sum_probs=143.8

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc-----cccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK-----TVATHTSFISCCIFPNSDQQILTGSGDCTCALW   92 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw   92 (320)
                      +...|.++..+++|.+-+ |..++-|..++............     ........|.++....++ .|..|+.++-+..|
T Consensus       311 ~~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl~~~  388 (781)
T 3v9f_A          311 SNASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGTDGGGINVF  388 (781)
T ss_dssp             SSSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEEBSSCEEEE
T ss_pred             CCCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-CEEEEeCCCcEEEE
Confidence            456789999999987544 44455677776532111100000     001123457787776655 46666766678889


Q ss_pred             ECCCcceeeec---ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc--CCc-------------cc
Q psy14961         93 DVESSQLLQSF---HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG--HHN-------------LI  154 (320)
Q Consensus        93 d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~--~~~-------------~~  154 (320)
                      +..++......   ......|.++.  .+++|. |..|+.++-+..+|..+++.......  ...             .+
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~v~~i~--~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi  465 (781)
T 3v9f_A          389 ENGKRVAIYNKENRELLSNSVLCSL--KDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI  465 (781)
T ss_dssp             ETTEEEEECC-----CCCSBEEEEE--ECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred             ECCCCeEEEccCCCCCCCcceEEEE--ECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE
Confidence            98765432211   11224455553  355554 55577767788888876643221110  000             01


Q ss_pred             cCCCeEEEEECcCCeeeeeecCC-----CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc--eeeeEE
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGH-----QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI--LFGATS  227 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~  227 (320)
                      ...+-+..+|..+++........     ...|.++...++|...+....+| +..+|..+++. ..+.....  ...+.+
T Consensus       466 gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~  543 (781)
T 3v9f_A          466 GTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQ  543 (781)
T ss_dssp             EETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEE
T ss_pred             EECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEE
Confidence            11244667777665432221111     35789999999888665443344 77788766543 23322111  112456


Q ss_pred             EEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee---c-CCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        228 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM---G-HENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       228 ~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~---~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                      +..+++|.+.+ |+.+|-+..||..+... ..+.   + ....|.++...++|++.+++ .+|..++
T Consensus       544 i~~d~~g~lWi-~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~~  607 (781)
T 3v9f_A          544 IYRSSKGQMWL-ATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST-NTGISCY  607 (781)
T ss_dssp             EEECTTSCEEE-EETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC-SSCEEEE
T ss_pred             EEECCCCCEEE-EECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc-CCceEEE
Confidence            77778887554 44466558888665432 2222   1 13468899999999877654 4554443

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.04  E-value=0.0055  Score=53.57  Aligned_cols=196  Identities=7%  Similarity=-0.008  Sum_probs=109.0

Q ss_pred             cCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961         66 SFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV  144 (320)
Q Consensus        66 ~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~  144 (320)
                      .....+.|.+.++.|+.+. ..+.|..++++.......+.........+++.+. .++++++-...+.|.+.++......
T Consensus       116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~-~g~lY~~d~~~~~I~~~~~dg~~~~  194 (386)
T 3v65_B          116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDGAHRK  194 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETT-TTEEEEEETTTTEEEECBTTSCSCE
T ss_pred             CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeC-CCeEEEEcCCCCeEEEEeCCCCceE
Confidence            3456788876666666554 5678999998765433222211122334555432 2333333344455555554322100


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCC-CeEEEEECCCCeeEeEEecCcce
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDD-ATCRLFDLRADKEVACYKKDSIL  222 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~d-g~i~iwd~~~~~~~~~~~~~~~~  222 (320)
                                                 ..+.........++++|.+..|+.+ ..+ +.|...+++..........  ..
T Consensus       195 ---------------------------~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~~  245 (386)
T 3v65_B          195 ---------------------------VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT--HL  245 (386)
T ss_dssp             ---------------------------EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS--SC
T ss_pred             ---------------------------EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC--CC
Confidence                                       0011122345789999976665444 344 7888888875433222211  12


Q ss_pred             eeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        223 FGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       223 ~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .....++|+|++..|+.+. ..+.|..+|.....+...+.........|++ ..+.++++....+.|+..+
T Consensus       246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~  315 (386)
T 3v65_B          246 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN  315 (386)
T ss_dssp             SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred             CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence            2356799998777666654 5678999987543322222223345678888 4566777777778887776

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.02  E-value=0.012  Score=56.65  Aligned_cols=259  Identities=9%  Similarity=0.055  Sum_probs=146.4

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc---ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK---KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      ...|.++..+++|.+.+.. .+| +.+|+...........   .........|.++....++. |-.|+.++-|..|+..
T Consensus       262 ~~~i~~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~  338 (795)
T 4a2l_A          262 SNYIRSLAMDSQNRLWIGT-FND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI  338 (795)
T ss_dssp             CSBEEEEEECTTSCEEEEE-SSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred             CCeEEEEEEcCCCCEEEEe-CCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence            4679999999999866554 344 7777753211000000   00111235688888776664 6667777788899876


Q ss_pred             Ccceeeecc------cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec--------------------c
Q psy14961         96 SSQLLQSFH------GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE--------------------G  149 (320)
Q Consensus        96 ~~~~~~~~~------~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~--------------------~  149 (320)
                      ++.......      .....|.++  ..+++|+ |-.|+.++-|..||..++....-..                    .
T Consensus       339 ~~~~~~~~~~~~~~~l~~~~V~~i--~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~  415 (795)
T 4a2l_A          339 RNRFKNIRNIPYKNSLSDNVVSCI--VEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE  415 (795)
T ss_dssp             GGSSEEECCCTTSSSCSCSSEEEE--EECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET
T ss_pred             cccceEEcCCCCCCCCCCCeeEEE--EECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC
Confidence            554321111      012345554  3455554 6667777778889887654322110                    0


Q ss_pred             CCc--cc-cCCCeEEEEECcCCeeeeeec----CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC---
Q psy14961        150 HHN--LI-TDDKLVNIWDMRTGYCVQSFE----GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---  219 (320)
Q Consensus       150 ~~~--~~-~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---  219 (320)
                      ...  .+ +.++-+..+|..+++......    .....|.++...++|...+... + -+.+||..+++... +...   
T Consensus       416 ~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~-~~~~~~~  492 (795)
T 4a2l_A          416 KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTT-IEKEKDG  492 (795)
T ss_dssp             TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEE-CCBCTTC
T ss_pred             CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEE-ccccccc
Confidence            111  11 233557778877654332211    1345789999999888665544 4 48889987664322 2211   


Q ss_pred             -c-ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-------cCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961        220 -S-ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-------GHENRVSCLQVSPDGTAFSSGSWDTTLRD  290 (320)
Q Consensus       220 -~-~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~  290 (320)
                       . ....+.++..+++|.+.+... .| +..||..+...  .+.       .+...|.+|...++|++.++.. .|.. .
T Consensus       493 ~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~-~  566 (795)
T 4a2l_A          493 TPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFY-C  566 (795)
T ss_dssp             CBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SCEE-E
T ss_pred             cccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CCce-e
Confidence             0 012356677788887665544 44 77787655443  221       1245799999999998766544 3544 4


Q ss_pred             ee
Q psy14961        291 EE  292 (320)
Q Consensus       291 ~~  292 (320)
                      ++
T Consensus       567 ~d  568 (795)
T 4a2l_A          567 FN  568 (795)
T ss_dssp             EE
T ss_pred             EC
Confidence            44

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.02  E-value=0.0015  Score=60.44  Aligned_cols=188  Identities=15%  Similarity=0.145  Sum_probs=107.8

Q ss_pred             CeEEEEECCCcceeeeccc--Ccc----ceeEEEEee--CCCCC---EEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc
Q psy14961         87 CTCALWDVESSQLLQSFHG--HTG----ELMDLDLAP--SETGN---TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT  155 (320)
Q Consensus        87 g~v~iwd~~~~~~~~~~~~--~~~----~v~~~~~~~--~~~~~---~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~  155 (320)
                      +.|..+|+.+++.+..++.  |..    .+....+..  ..+|+   .++.++.+|.+.++|..+|+.+..+......- 
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~-  369 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT-  369 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC-
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc-
Confidence            5899999999998877643  211    011111111  13563   78889999999999999999887654332100 


Q ss_pred             CCCeEEEEECcCCeeee--------------------eecCCCC--CeEEEEEcCCCCEEEEee----------------
Q psy14961        156 DDKLVNIWDMRTGYCVQ--------------------SFEGHQS--DVNSVKFHPSGDAVATGS----------------  197 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~--------------------~~~~~~~--~v~~v~~~p~g~~l~s~s----------------  197 (320)
                         ...-.|+.+++++.                    ..++...  .-..++++|+...++...                
T Consensus       370 ---~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~  446 (582)
T 1flg_A          370 ---WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTK  446 (582)
T ss_dssp             ---SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCT
T ss_pred             ---ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccC
Confidence               01111222222211                    0010000  012456666544443322                


Q ss_pred             -----------------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961        198 -----------------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL  260 (320)
Q Consensus       198 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~  260 (320)
                                       .+|.|.-||+.+++.+-.++.......   ..+...+.+++.|+.||.++.||..+++.+-++
T Consensus       447 g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~  523 (582)
T 1flg_A          447 GSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWA---GVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF  523 (582)
T ss_dssp             TSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCS---CCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcc---cceEeCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence                             368899999999887655443322111   112234677888999999999999999888776


Q ss_pred             ecCCCce-eEEEECcCCCeEEE
Q psy14961        261 MGHENRV-SCLQVSPDGTAFSS  281 (320)
Q Consensus       261 ~~h~~~i-~~i~~s~~~~~l~s  281 (320)
                      ......+ .-+.|..||++++.
T Consensus       524 ~~~~g~~a~P~~y~~~G~qYv~  545 (582)
T 1flg_A          524 QTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             ECSSCCCSCCEEEEETTEEEEE
T ss_pred             cCCCCcccCceEEEECCEEEEE
Confidence            5433222 23677788885443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.00  E-value=0.006  Score=52.53  Aligned_cols=195  Identities=7%  Similarity=0.001  Sum_probs=109.7

Q ss_pred             CeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE
Q psy14961         67 FISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ  145 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~  145 (320)
                      ....+.|.+.++.|+.+. ..+.|..++++.......+.........+++.+. .++...+-...+.|.+.++...... 
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG~~~~-  151 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDGAHRK-  151 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred             ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecC-CCeEEEEcCCCCeEEEEcCCCCceE-
Confidence            356788876666666554 5688998998765433322211223344555432 2333344444556666665432110 


Q ss_pred             EeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCC-CeEEEEECCCCeeEeEEecCccee
Q psy14961        146 SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDD-ATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       146 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                                                ..+.........++++|.+..| .+-..+ +.|...+++......... . ...
T Consensus       152 --------------------------~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~-~~~  203 (349)
T 3v64_C          152 --------------------------VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-T-HLF  203 (349)
T ss_dssp             --------------------------EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-S-SCS
T ss_pred             --------------------------EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-C-CCC
Confidence                                      0011122345789999966555 444444 788888887543221111 1 122


Q ss_pred             eeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        224 GATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+..++++|++..|+.+. ..+.|..+|.....+...+.........|++ ..+.++++-...+.|...+
T Consensus       204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~  272 (349)
T 3v64_C          204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN  272 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred             CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence            357899998777666654 5678999986543322222223345678888 4566677766677777766

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.97  E-value=0.0047  Score=50.55  Aligned_cols=209  Identities=10%  Similarity=0.120  Sum_probs=120.8

Q ss_pred             ccccccCeEEEEecCCCCEEE-EEeCCCeEEEEECCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         61 VATHTSFISCCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      +.+-...+..+.+.++++.|+ +...++.|...|+. ++.+..+... ......+++  ..++.++++.-.++.+.++++
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~--~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEY--IGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEE--CSTTEEEEEETTTTEEEEEEE
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEE--eCCCEEEEEECCCCcEEEEEc
Confidence            334445688889987766655 47778899999987 7777665421 134455555  345555555445667777776


Q ss_pred             CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC---CeeEeE
Q psy14961        139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA---DKEVAC  215 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~---~~~~~~  215 (320)
                      .....+..             +....+.    .. ..........++|+|.++.|.++.+.....+|.++.   ...+..
T Consensus        99 ~~~~~i~~-------------~~~~~~~----~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i  160 (255)
T 3qqz_A           99 TPNSEVKI-------------LKKIKIP----LQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHI  160 (255)
T ss_dssp             CTTCCEEE-------------EEEEECC----CS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEE
T ss_pred             CCCCeeee-------------eeeeccc----cc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceee
Confidence            44321110             0001000    00 011344568999999998887777655555665531   111222


Q ss_pred             Eec-----CcceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEe--e-cC------CCceeEEEECcCCCeEE
Q psy14961        216 YKK-----DSILFGATSVDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHL--M-GH------ENRVSCLQVSPDGTAFS  280 (320)
Q Consensus       216 ~~~-----~~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~--~-~h------~~~i~~i~~s~~~~~l~  280 (320)
                      ...     .........++++|.. .+++....+..+..+|.... .+..+  . +.      -..-..|+|.++|++++
T Consensus       161 ~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI  239 (255)
T 3qqz_A          161 SKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI  239 (255)
T ss_dssp             EECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred             ecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence            111     1122356789999865 46666677888999996643 44333  2 11      12568999999999777


Q ss_pred             EecCCCceEeee
Q psy14961        281 SGSWDTTLRDEE  292 (320)
Q Consensus       281 s~s~D~~ir~~~  292 (320)
                      + |.-..+..+.
T Consensus       240 v-sE~n~~y~f~  250 (255)
T 3qqz_A          240 V-SEPNRFYRFT  250 (255)
T ss_dssp             E-ETTTEEEEEE
T ss_pred             E-cCCceEEEEE
Confidence            6 4444444443

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.94  E-value=0.0011  Score=62.47  Aligned_cols=235  Identities=12%  Similarity=0.078  Sum_probs=117.6

Q ss_pred             eEeecccceeEE--EEEeC-ccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          2 IIWDGLTQTKEH--SVTMP-ATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         2 ~~W~~~~~~~~~--~~~~~-~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      .+||..+++-..  ....+ .....++++..++++++.||. +..+.+||...  ........+...... .++...+++
T Consensus       222 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t--~~W~~~~~~~~~R~~-~s~~~~~dg  298 (656)
T 1k3i_A          222 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS--DSWIPGPDMQVARGY-QSSATMSDG  298 (656)
T ss_dssp             EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG--TEEEECCCCSSCCSS-CEEEECTTS
T ss_pred             EEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcC--CceeECCCCCccccc-cceEEecCC
Confidence            367777665221  22111 223345678899999999884 45788888753  222222222221111 223334577


Q ss_pred             CEEEEEe-CC-----CeEEEEECCCcceeee-----cccCccceeEEEEeeCCCCCEEEEEeCC---------CeEEEEe
Q psy14961         78 QQILTGS-GD-----CTCALWDVESSQLLQS-----FHGHTGELMDLDLAPSETGNTFVSGSSD---------KLVNIWD  137 (320)
Q Consensus        78 ~~l~s~~-~d-----g~v~iwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~l~s~~~d---------g~i~lwd  137 (320)
                      +.++.|+ .+     ..+.+||+.++.....     .......-.   .....++..++.++.+         ..+..||
T Consensus       299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~---~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd  375 (656)
T 1k3i_A          299 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ---GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY  375 (656)
T ss_dssp             CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT---GGGTTTCSCCEEECGGGCEEECCSSSEEEEEE
T ss_pred             eEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc---ceeecCCceEEEECCCCcEEEecCccceeeee
Confidence            8888888 34     5789999987653321     000000000   0011233444444433         3567788


Q ss_pred             CCCCcEEEEeccC------------Cccc---cCCC---------------------eEEEEECcCCeeeeee--cCCCC
Q psy14961        138 MRTGYCVQSFEGH------------HNLI---TDDK---------------------LVNIWDMRTGYCVQSF--EGHQS  179 (320)
Q Consensus       138 ~~~~~~~~~~~~~------------~~~~---~~d~---------------------~i~iwd~~~~~~~~~~--~~~~~  179 (320)
                      ..+..........            ...+   ..++                     .+.+||..+..-....  ..+..
T Consensus       376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~  455 (656)
T 1k3i_A          376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA  455 (656)
T ss_dssp             CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC
T ss_pred             cCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC
Confidence            7665432211000            0000   0011                     4556666554322221  11222


Q ss_pred             C-eEEEEEcCCCCEEEEeeCC-----------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961        180 D-VNSVKFHPSGDAVATGSDD-----------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       180 ~-v~~v~~~p~g~~l~s~s~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                      . -.++...|+|+.++.|+.+           ..+.+||..+.+=...-...........+.+.|+|++++.|+.
T Consensus       456 R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          456 RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            2 2355677899999999854           4689999876542111111111112234456789999999885

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.87  E-value=0.0089  Score=51.05  Aligned_cols=200  Identities=15%  Similarity=0.241  Sum_probs=112.2

Q ss_pred             CCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEE----ecCCCC---EEEEEeC---CCeEEEEEC--CC
Q psy14961         29 PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCI----FPNSDQ---QILTGSG---DCTCALWDV--ES   96 (320)
Q Consensus        29 ~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~----~~~~~~---~l~s~~~---dg~v~iwd~--~~   96 (320)
                      |..+++++..+.+-+.+||+...     ....+..  +.+..+.    |...++   .+++..+   +++|++|++  .+
T Consensus        38 p~~s~ii~t~k~~gL~Vydl~G~-----~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~  110 (355)
T 3amr_A           38 PQNSKLITTNKKSGLVVYSLDGK-----MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN  110 (355)
T ss_dssp             GGGCEEEEEETTTEEEEEETTSC-----EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred             CCccEEEEEcCCCCEEEEcCCCc-----EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence            35567777777888999998421     1222221  1222222    222232   2344444   479999966  33


Q ss_pred             cceeeeccc------Cc-cceeEEEEeeCC-CCC-EEEEEeCCCeEEEEeCC---CCcEEEEeccCCccccCCCeEEEEE
Q psy14961         97 SQLLQSFHG------HT-GELMDLDLAPSE-TGN-TFVSGSSDKLVNIWDMR---TGYCVQSFEGHHNLITDDKLVNIWD  164 (320)
Q Consensus        97 ~~~~~~~~~------~~-~~v~~~~~~~~~-~~~-~l~s~~~dg~i~lwd~~---~~~~~~~~~~~~~~~~~d~~i~iwd  164 (320)
                      +. +..+..      .. ..++.+++.-++ .+. +++....+|.+..|++.   .+..                     
T Consensus       111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~---------------------  168 (355)
T 3amr_A          111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI---------------------  168 (355)
T ss_dssp             CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE---------------------
T ss_pred             Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc---------------------
Confidence            33 333311      11 456667773333 333 67788888988888872   2211                     


Q ss_pred             CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC-----CeeEeEEecCcceeeeEEEEE--ecCCc-E
Q psy14961        165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA-----DKEVACYKKDSILFGATSVDF--SVSGR-L  236 (320)
Q Consensus       165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~--s~~~~-~  236 (320)
                        +.+.+.++.- ...+..+...+....|+.+-++.-|..++.+.     .+.+...........+..+++  .++++ +
T Consensus       169 --~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gy  245 (355)
T 3amr_A          169 --SGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGY  245 (355)
T ss_dssp             --EEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEE
T ss_pred             --cceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEE
Confidence              1122333321 23577888898888999999987776667542     333433322222223455555  45666 6


Q ss_pred             EEEEe-CCCeEEEEcCC-CCeEEEEe
Q psy14961        237 LFAGY-NDYTINVWDSL-KCCRVNHL  260 (320)
Q Consensus       237 l~~g~-~dg~v~~wd~~-~~~~~~~~  260 (320)
                      |++++ .+.+..+||.. +.+.+..|
T Consensus       246 LivSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          246 LMASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             EEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             EEEEcCCCCEEEEEECCCCCcEEEEE
Confidence            76666 56799999986 55566665

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.85  E-value=0.023  Score=54.49  Aligned_cols=259  Identities=12%  Similarity=0.038  Sum_probs=139.3

Q ss_pred             ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc-----ccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT-----VATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      ...|.++..+++|.+.+... . -+.+|+....  .......     .......|.++....++ .|..|...+-+.++|
T Consensus       210 ~~~i~~i~~d~~g~lwigt~-~-Gl~~~d~~~~--~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigt~~~Gl~~~~  284 (781)
T 3v9f_A          210 GNDVRCIYKDTNGNIWIGTS-K-GLALFNANTE--TFTNFHNNPGNIHGALSSYIFSIKQLKDN-KLWIATELNGIMILD  284 (781)
T ss_dssp             CSSEEEEEECTTCCEEEEET-T-EEEEEETTTT--EEEC-----------CCCCEEEEEECTTS-EEEEEESSSCEEEEE
T ss_pred             CCceeEEEEcCCCCEEEEeC-C-cHheECCCCC--cEEEEEcCCCccccccCceEEEEEECCCC-CEEEEeCCCCeEEEC
Confidence            45788998899988666543 3 5778875321  1111000     01123567787776655 566677656688889


Q ss_pred             CCCcceeeecc--------------cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-------------
Q psy14961         94 VESSQLLQSFH--------------GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-------------  146 (320)
Q Consensus        94 ~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-------------  146 (320)
                      ..++.......              .....|.++  ..+.+|. |-.|+.++-|..++...+.....             
T Consensus       285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i--~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~  361 (781)
T 3v9f_A          285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYI--FQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLS  361 (781)
T ss_dssp             TTCC---------CEEECBCSSTTSBSSSCEEEE--EECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCS
T ss_pred             CCCCeeeeeeccccccccCCCCCCCCCCCeEEEE--EEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCC
Confidence            87654321111              122345554  3455554 66777667788888765432111             


Q ss_pred             ------ec--cCC-cc-ccCCCeEEEEECcCCeeeeee---cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961        147 ------FE--GHH-NL-ITDDKLVNIWDMRTGYCVQSF---EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV  213 (320)
Q Consensus       147 ------~~--~~~-~~-~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~  213 (320)
                            +.  ... .. .+.++-+..+|..++......   ......|.++...++|...+ |+.++-+..+|..+++..
T Consensus       362 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~  440 (781)
T 3v9f_A          362 NKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ  440 (781)
T ss_dssp             SSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred             CcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence                  00  000 00 122344666776543322111   11335688999888887555 666667888888765432


Q ss_pred             eEEecC-cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-----CCceeEEEECcCCCeEEEecCCCc
Q psy14961        214 ACYKKD-SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-----ENRVSCLQVSPDGTAFSSGSWDTT  287 (320)
Q Consensus       214 ~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-----~~~i~~i~~s~~~~~l~s~s~D~~  287 (320)
                       .+... .....+.++...++|.+.+ |+. +-+..||..+..........     ...|.+|...++|++.+....+|.
T Consensus       441 -~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl  517 (781)
T 3v9f_A          441 -IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGV  517 (781)
T ss_dssp             -ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCE
T ss_pred             -EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCE
Confidence             22211 1112345666677776544 455 45888886654322211111     467999999999987665443554


Q ss_pred             eE
Q psy14961        288 LR  289 (320)
Q Consensus       288 ir  289 (320)
                      .+
T Consensus       518 ~~  519 (781)
T 3v9f_A          518 GI  519 (781)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.83  E-value=0.003  Score=60.40  Aligned_cols=112  Identities=16%  Similarity=0.103  Sum_probs=62.0

Q ss_pred             ceEEEEEc-CCCCEEEEecC-CC----eEEEEEeccc-CCcccccccccccccCeEEEEecCCCCEEEEEeCC-----Ce
Q psy14961         21 WVMACAYA-PSGSVVASGGL-DN----KVTVYAIALE-DDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-----CT   88 (320)
Q Consensus        21 ~V~~~~~~-~~~~~l~s~~~-dg----~i~v~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~   88 (320)
                      .+.+..|| |||++|+.+.. +|    .|+++|+... ..   ....+.   .......|+++++.|+....|     ..
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~  248 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENK  248 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCcccc---CceeeEEEecCCCEEEEEEECCCCCCCE
Confidence            56788999 99998886533 22    4888887543 21   011111   113457799999877766654     35


Q ss_pred             EEEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCC---CeEEEEeCC
Q psy14961         89 CALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSD---KLVNIWDMR  139 (320)
Q Consensus        89 v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d---g~i~lwd~~  139 (320)
                      |..+++.++..  ...+...... .......+++|+.|+..+.+   ..|.++|+.
T Consensus       249 v~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~  303 (751)
T 2xe4_A          249 VWRHVMGKLQSEDVCLYEEHNPL-FSAFMYKAADTNTLCIGSQSPETAEVHLLDLR  303 (751)
T ss_dssp             EEEEETTSCGGGCEEEEECCCTT-CEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred             EEEEECCCCchhcEEEEecCCCc-eEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence            77788876542  1222211111 22333446778887765432   234444543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.65  E-value=0.0049  Score=58.92  Aligned_cols=193  Identities=12%  Similarity=0.024  Sum_probs=99.3

Q ss_pred             CeEEEEec-CCCCEEEEEe-CC----CeEEEEECCCc-ceeee-cccCccceeEEEEeeCCCCCEEEEEeCCC-----eE
Q psy14961         67 FISCCIFP-NSDQQILTGS-GD----CTCALWDVESS-QLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDK-----LV  133 (320)
Q Consensus        67 ~v~~~~~~-~~~~~l~s~~-~d----g~v~iwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~i  133 (320)
                      .+....|+ +++++|+.+. .+    ..|+++|+.++ +.+.. +.   .....+.|  +++|+.|+....|.     .|
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~W--spDg~~l~y~~~d~~~~~~~v  249 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVW--GPDHTSLFYVTKDETLRENKV  249 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEE--CSSTTEEEEEEECTTCCEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEE--ecCCCEEEEEEECCCCCCCEE
Confidence            46678899 9998877443 23    35999999988 63321 11   11123445  55677777665442     24


Q ss_pred             EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCC
Q psy14961        134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRAD  210 (320)
Q Consensus       134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~  210 (320)
                      .++++.+++.              ..+.++.         . .......++.|+|+|++|+..+   ....|.++|+.++
T Consensus       250 ~~~~lgt~~~--------------~~~lv~~---------~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          250 WRHVMGKLQS--------------EDVCLYE---------E-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             EEEETTSCGG--------------GCEEEEE---------C-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             EEEECCCCch--------------hcEEEEe---------c-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            4444433210              0011111         1 1222346789999999887554   2346888898764


Q ss_pred             e-eE--eEE-ecCcceeeeEEEEEecCCcEEEEEeC-C----CeEEEEcCCCCeEEEE-eecCCC--ceeEEEECcCCCe
Q psy14961        211 K-EV--ACY-KKDSILFGATSVDFSVSGRLLFAGYN-D----YTINVWDSLKCCRVNH-LMGHEN--RVSCLQVSPDGTA  278 (320)
Q Consensus       211 ~-~~--~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~-d----g~v~~wd~~~~~~~~~-~~~h~~--~i~~i~~s~~~~~  278 (320)
                      . ..  ... .....  ...++.|+. |..|+..++ +    ..|..+|......... +..|..  .+..+.+. .+.+
T Consensus       306 ~~~~~~~~l~~~~~~--~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~l  381 (751)
T 2xe4_A          306 NAHNTLEIVRPREKG--VRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYL  381 (751)
T ss_dssp             TTCCCEEESSCCCTT--CCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEE
T ss_pred             CCCceeEEeecCCCC--ceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEE
Confidence            2 11  111 11111  112233333 555544433 2    2566667653212223 444543  45566665 3456


Q ss_pred             EEEecCCCceEeee
Q psy14961        279 FSSGSWDTTLRDEE  292 (320)
Q Consensus       279 l~s~s~D~~ir~~~  292 (320)
                      +++...|+..+++-
T Consensus       382 v~~~~~~g~~~l~~  395 (751)
T 2xe4_A          382 VVAGRRAGLTRIWT  395 (751)
T ss_dssp             EEEEEETTEEEEEE
T ss_pred             EEEEEeCCEEEEEE
Confidence            67777788766554

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.51  E-value=0.032  Score=46.77  Aligned_cols=195  Identities=9%  Similarity=0.064  Sum_probs=107.2

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC-eEEEEeCCCCcEE
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK-LVNIWDMRTGYCV  144 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg-~i~lwd~~~~~~~  144 (320)
                      ....+.+.+++..+++-..++.|..||.+.. ....+. .......+++  .++|+++++... ++ .|..+|..+++..
T Consensus        33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~--~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAF--TSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEE--CTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEE--cCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            3456778777775555557889999998753 332222 2234455554  556775554433 22 3555665555422


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee-EeEEec-----
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE-VACYKK-----  218 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~-~~~~~~-----  218 (320)
                      ..                .+..          .......++..+.+..+++-..++.|..+|...++. +.....     
T Consensus       109 ~~----------------~~~~----------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~  162 (306)
T 2p4o_A          109 TL----------------LTLP----------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS  162 (306)
T ss_dssp             EE----------------EECT----------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred             EE----------------EeCC----------CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccc
Confidence            11                1110          011123444455554455555688899998775431 211110     


Q ss_pred             --CcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCC-CeE--EEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        219 --DSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLK-CCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       219 --~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~-~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                        .........+  +|++..|+.+. ..+.|..+|... +..  ...+.. ......|+++++|+++++....+.|..++
T Consensus       163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~  239 (306)
T 2p4o_A          163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIA  239 (306)
T ss_dssp             STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred             cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence              0111122334  88887766654 577899998653 211  111111 13456799999999888877778888887


Q ss_pred             cc
Q psy14961        293 SK  294 (320)
Q Consensus       293 ~~  294 (320)
                      ..
T Consensus       240 ~~  241 (306)
T 2p4o_A          240 PD  241 (306)
T ss_dssp             TT
T ss_pred             CC
Confidence            53

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.50  E-value=0.041  Score=48.78  Aligned_cols=198  Identities=11%  Similarity=0.013  Sum_probs=108.6

Q ss_pred             EEEEecCC--CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961         69 SCCIFPNS--DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        69 ~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~  146 (320)
                      ..+.+.++  ...|+.+...+.|+.+|+.++....... .......+++  +++|+ |+.+...+.      .....+..
T Consensus       142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giav--d~dG~-lyVad~~~~------~~~~gv~~  211 (433)
T 4hw6_A          142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNF--TLNGD-MVVVDDQSS------DTNTGIYL  211 (433)
T ss_dssp             CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEE--CTTCC-EEEEECCSC------TTSEEEEE
T ss_pred             ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEE--CCCCC-EEEEcCCCC------cccceEEE
Confidence            45677763  4567666555889999987776544332 2333455555  55677 444443220      00000111


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeE-eEEecCcceee
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEV-ACYKKDSILFG  224 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~  224 (320)
                      +.......   .         ...+..    ......++++| +|..+++-..++.|+.+|..++... ........ ..
T Consensus       212 ~~~~~~~~---~---------~~~~~~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~-~~  274 (433)
T 4hw6_A          212 FTRASGFT---E---------RLSLCN----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK-GS  274 (433)
T ss_dssp             ECGGGTTC---C---------EEEEEE----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC-SS
T ss_pred             EECCCCee---c---------cccccc----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC-CC
Confidence            11000000   0         001111    12235688999 6776666667889999998766542 22221111 11


Q ss_pred             eEEEEEecCCcEEEEE-eCCCeEEEEcCC--CCeE--EEEeecC---------------CCceeEEEE---------CcC
Q psy14961        225 ATSVDFSVSGRLLFAG-YNDYTINVWDSL--KCCR--VNHLMGH---------------ENRVSCLQV---------SPD  275 (320)
Q Consensus       225 ~~~~~~s~~~~~l~~g-~~dg~v~~wd~~--~~~~--~~~~~~h---------------~~~i~~i~~---------s~~  275 (320)
                      ...++|+|++..|+.+ ...+.|..++..  .+..  ...+.+.               -.....|++         .++
T Consensus       275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~  354 (433)
T 4hw6_A          275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE  354 (433)
T ss_dssp             CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC
T ss_pred             cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC
Confidence            2358999999966555 456789887643  2211  1112211               123677999         788


Q ss_pred             CCeEEEecCCCceEeeec
Q psy14961        276 GTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       276 ~~~l~s~s~D~~ir~~~~  293 (320)
                      |.++++-.....||..+.
T Consensus       355 g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          355 YDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             EEEEEEETTTTEEEEECT
T ss_pred             CcEEEEECCCCEEEEECC
Confidence            888888888889998875

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.46  E-value=0.04  Score=46.67  Aligned_cols=132  Identities=10%  Similarity=0.045  Sum_probs=77.4

Q ss_pred             eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe--CCCeEEEEcCCCCeEE
Q psy14961        181 VNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY--NDYTINVWDSLKCCRV  257 (320)
Q Consensus       181 v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--~dg~v~~wd~~~~~~~  257 (320)
                      ...+++.+.+. .+++-...+.|.++++...........  .......++++|.+..|+...  ..+.|...++......
T Consensus        81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~--~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~  158 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF  158 (318)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC--CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence            45788887544 445556678999999875432222211  112356788998766665554  3578888876532222


Q ss_pred             EEeecCCCceeEEEECcC-CCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEE
Q psy14961        258 NHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTV  315 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (320)
                      .-....-..-+.|+++|+ +++.++-+..+.|...+.....++.+.......| .|+++
T Consensus       159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P-~glav  216 (318)
T 3sov_A          159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP-FALTL  216 (318)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCE-EEEEE
T ss_pred             EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCc-eEEEE
Confidence            111222345689999985 4455665667888888765444444443333333 35554

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.41  E-value=0.066  Score=48.13  Aligned_cols=254  Identities=10%  Similarity=0.052  Sum_probs=129.5

Q ss_pred             eEEEEEcCC-CCEEEEecC-CCeEEEEEecccCCccccccccc-ccccCeEEEEe-------cCCCCEEEEEeCCC----
Q psy14961         22 VMACAYAPS-GSVVASGGL-DNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIF-------PNSDQQILTGSGDC----   87 (320)
Q Consensus        22 V~~~~~~~~-~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-------~~~~~~l~s~~~dg----   87 (320)
                      -..++|+|. +..|+.+.. .+.|++.|+.  ........... ........++|       .+++..|+++...+    
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~--~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~  218 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLK--NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD  218 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETT--TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECC--CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence            457889983 444554443 3556666653  21111111111 11223677888       88888777776554    


Q ss_pred             ---eEEEEECCC-ccee-----eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-------CCcEEEEeccCC
Q psy14961         88 ---TCALWDVES-SQLL-----QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-------TGYCVQSFEGHH  151 (320)
Q Consensus        88 ---~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-------~~~~~~~~~~~~  151 (320)
                         .|.+.+... +...     ..+... .....+++.+. ++.++++-..++.|..+|+.       ++..-...    
T Consensus       219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~-~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~----  292 (496)
T 3kya_A          219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPI-NGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI----  292 (496)
T ss_dssp             GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTT-TCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB----
T ss_pred             cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCC-CCeEEEEECCCCEEEEEecccccccccCceeeccc----
Confidence               255555333 1221     111111 12234445432 34555566667778777765       33210000    


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC--CeeE--eEEecC-------
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA--DKEV--ACYKKD-------  219 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~--~~~~--~~~~~~-------  219 (320)
                       .....+..        +.+... +....-..++|+|+|++| ++-+....|+.++...  +...  ..+-..       
T Consensus       293 -~~~~~g~~--------~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~  362 (496)
T 3kya_A          293 -VKNNPNTF--------KQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYR  362 (496)
T ss_dssp             -GGGCTTTE--------EEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCB
T ss_pred             -cccccccc--------ceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCccc
Confidence             00000000        001111 112334789999999954 5556778898866543  2210  111110       


Q ss_pred             ------cceeeeE-EEEEe-------cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC----------------------
Q psy14961        220 ------SILFGAT-SVDFS-------VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH----------------------  263 (320)
Q Consensus       220 ------~~~~~~~-~~~~s-------~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h----------------------  263 (320)
                            .....+. -+...       ++|.+.++=+.+..|+.++. .+ .+.++.+.                      
T Consensus       363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~  440 (496)
T 3kya_A          363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREV  440 (496)
T ss_dssp             CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTT
T ss_pred             CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhh
Confidence                  0011123 33443       45666666667889999984 34 34344322                      


Q ss_pred             --CCceeEEEECcC-CCeEEEecCCCceEeeecch
Q psy14961        264 --ENRVSCLQVSPD-GTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       264 --~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~~  295 (320)
                        -.....|+++++ |.++++=+.+..||..+.+.
T Consensus       441 a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~  475 (496)
T 3kya_A          441 ARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ  475 (496)
T ss_dssp             CCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred             hhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence              123678999996 88888888889999888543

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.37  E-value=0.0043  Score=58.76  Aligned_cols=224  Identities=9%  Similarity=-0.017  Sum_probs=108.1

Q ss_pred             ceEEEEEcCCCCEEEEec-CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCcc
Q psy14961         21 WVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESSQ   98 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~   98 (320)
                      .+.+++|++.+..|+.+. ..+.|..++++...........+.........+++...++.|+.+ ...+.|.+.+++...
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~  486 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK  486 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence            456788998776666553 457888887753100001111111111122345555444444443 456789999887554


Q ss_pred             eeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                      ....+.........+++.|  .+..|+.+..  .+.|.+.++.....                         +.+  +..
T Consensus       487 ~~~l~~~~~~~P~giavDp--~~g~ly~td~~~~~~I~~~~~dG~~~-------------------------~~l--~~~  537 (699)
T 1n7d_A          487 RKTLFREQGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNGVDI-------------------------YSL--VTE  537 (699)
T ss_dssp             EEEECCCSSCCCCCEECCS--SSSCCEECCCSSSCCEEBCCSSSCCC-------------------------CEE--SCS
T ss_pred             eEEEEeCCCCCcceEEEcc--CCCcEEEcccCCCCeEEEEeCCCCCe-------------------------eEE--EeC
Confidence            3322221122234455433  2333333322  13444443321100                         000  000


Q ss_pred             CCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961        177 HQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC  255 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~  255 (320)
                      .-...+.|+++|++..| ++-+..+.|..+++....................+++..+ .++++....+.|..++..++.
T Consensus       538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS  616 (699)
T ss_dssp             SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred             CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence            11234579999875544 5556678899999875332222221111111233444443 455555677899999987777


Q ss_pred             EEEEeecCCCceeEEEECc
Q psy14961        256 RVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~  274 (320)
                      .+..+.........|++.+
T Consensus       617 ~~~~i~~~~~~P~~i~v~~  635 (699)
T 1n7d_A          617 DVNLLAENLLSPEDMVLFH  635 (699)
T ss_dssp             EEECCCTTCSSCCCCCBCS
T ss_pred             ceEEeecCCCCCcEEEEeC
Confidence            6665543333344554443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.34  E-value=0.059  Score=46.01  Aligned_cols=192  Identities=14%  Similarity=0.268  Sum_probs=112.4

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCC--CCC---EEEEEeC---CCeEEEEeC--CCCcEEEE
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE--TGN---TFVSGSS---DKLVNIWDM--RTGYCVQS  146 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~---~l~s~~~---dg~i~lwd~--~~~~~~~~  146 (320)
                      ...++.....+-+.+||+ .++.++.+..  +.+..+.+-+.-  .|+   .+++...   +..|.+|++  .++. +..
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~  115 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS  115 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence            346777778889999999 6888777653  556666665410  121   2233333   467888865  2222 221


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE--cCC-CC-EEEEeeCCCeEEEEECC---C----CeeEeE
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF--HPS-GD-AVATGSDDATCRLFDLR---A----DKEVAC  215 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~--~p~-g~-~l~s~s~dg~i~iwd~~---~----~~~~~~  215 (320)
                      +....                 .++.   .-...+..+++  +|. +. +++...++|.+..|++.   .    .+.+..
T Consensus       116 i~~~~-----------------~pv~---t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~  175 (355)
T 3amr_A          116 MTDPD-----------------HPIA---TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA  175 (355)
T ss_dssp             CSCTT-----------------SCEE---CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred             ccccc-----------------cCcC---CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence            10000                 0000   00123445666  674 44 57778889999999883   2    233444


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-----CCeEEEEee-cC-CCceeEEEE--CcCCC--eEEEecC
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-----KCCRVNHLM-GH-ENRVSCLQV--SPDGT--AFSSGSW  284 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-----~~~~~~~~~-~h-~~~i~~i~~--s~~~~--~l~s~s~  284 (320)
                      +....   .+..+...+....|+.+-++.-|..++..     +...+.... +| ...+..|++  .++++  +|+|+-.
T Consensus       176 f~lgs---q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG  252 (355)
T 3amr_A          176 FKMNS---QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG  252 (355)
T ss_dssp             EECSS---CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred             ecCCC---CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence            44332   34677888888999999998666666644     234444331 33 346888988  56666  4555546


Q ss_pred             CCceEeeecch
Q psy14961        285 DTTLRDEESKN  295 (320)
Q Consensus       285 D~~ir~~~~~~  295 (320)
                      +.+.-+++.+.
T Consensus       253 ~~s~~Vydr~~  263 (355)
T 3amr_A          253 NSSYAIYDRQG  263 (355)
T ss_dssp             GTEEEEEESST
T ss_pred             CCEEEEEECCC
Confidence            78899999853

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.34  E-value=0.058  Score=45.80  Aligned_cols=111  Identities=7%  Similarity=-0.056  Sum_probs=63.1

Q ss_pred             CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC--cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-
Q psy14961        178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD--SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-  254 (320)
Q Consensus       178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~-  254 (320)
                      ...+..+++.|++..+ .++.+|.+.+.+.+.++.-......  ........+.+.+++.++++|. +|.+. +....+ 
T Consensus       204 ~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~  280 (327)
T 2xbg_A          204 SRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQ  280 (327)
T ss_dssp             SSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTS
T ss_pred             CCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCc
Confidence            3467788899988755 4556788877643323322211111  0112346777888888777665 56553 322222 


Q ss_pred             --eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        255 --CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       255 --~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                        ..+.....+...+.++.|.++++ ++.++.+|+|..++
T Consensus       281 tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          281 TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence              22221112345678999986655 56667788877655

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.31  E-value=0.071  Score=46.42  Aligned_cols=217  Identities=9%  Similarity=0.021  Sum_probs=110.5

Q ss_pred             cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCc
Q psy14961         20 TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESS   97 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~   97 (320)
                      ....+++|++.+..|. +-...+.|..++++...  ...  .+.........+++.+.+..|+.+ ...+.|.+.+++..
T Consensus       116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~--~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~  191 (386)
T 3v65_B          116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA  191 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EEE--EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred             CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cEE--EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence            4567899997655554 44456778877764221  111  111111122345555545555444 45678888887654


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeC-C-CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-D-KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-d-g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      .....+.........+++.|.  +..|+.+.. + +.|...++......                           ....
T Consensus       192 ~~~~l~~~~l~~P~giavdp~--~g~ly~td~~~~~~I~r~~~dG~~~~---------------------------~~~~  242 (386)
T 3v65_B          192 HRKVLLWQSLEKPRAIALHPM--EGTIYWTDWGNTPRIEASSMDGSGRR---------------------------IIAD  242 (386)
T ss_dssp             SCEEEECSSCSCEEEEEEETT--TTEEEEEECSSSCEEEEEETTSCSCE---------------------------EEEC
T ss_pred             ceEEeecCCCCCCcEEEEEcC--CCeEEEeccCCCCEEEEEeCCCCCcE---------------------------EEEE
Confidence            322222222233455665443  344444332 2 45555554321100                           0001


Q ss_pred             CCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..-...+.|+++|++..|+ +-+..+.|..+|+............  ...+..+++ ..+.++++-...+.|..++..++
T Consensus       243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  319 (386)
T 3v65_B          243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  319 (386)
T ss_dssp             SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS--CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC--CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence            1122357899998766654 4456788999998754332222211  112345566 35566666667888988886555


Q ss_pred             eEEEEeecCCCceeEEEE
Q psy14961        255 CRVNHLMGHENRVSCLQV  272 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~  272 (320)
                      .....+.........|++
T Consensus       320 ~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          320 KNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             CSCEEEECSCSCCCCEEE
T ss_pred             cceEEEccCCCCCceEEE
Confidence            554444433333344443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.26  E-value=0.069  Score=45.07  Aligned_cols=212  Identities=10%  Similarity=0.002  Sum_probs=108.7

Q ss_pred             cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCc
Q psy14961         20 TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESS   97 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~   97 (320)
                      ....+++|++++..|. +-...+.|..++++...........+.........+++...++.|+.+ ...+.|.+.+++..
T Consensus        30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~  109 (316)
T 1ijq_A           30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (316)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence            4467899998665454 445568888888753100001111111111233566666545555544 55789999998754


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEeCC--CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD--KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      .....+.........+++.|  .+..++.+...  +.|...++.... ...+                          ..
T Consensus       110 ~~~~~~~~~~~~P~~iavdp--~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~--------------------------~~  160 (316)
T 1ijq_A          110 KRKTLFRENGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNGVD-IYSL--------------------------VT  160 (316)
T ss_dssp             SEEEEEECTTCCEEEEEEET--TTTEEEEEECSSSCEEEEEETTSCC-EEEE--------------------------EC
T ss_pred             ceEEEEECCCCCcceEEeCC--CCCEEEEEccCCCCeEEEEcCCCCC-eEEE--------------------------EE
Confidence            33222221223345566543  23444444332  455555543211 0000                          00


Q ss_pred             CCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..-...+.++++|++..|+ +-+..+.|..+|++................+..+++. .+.++++-...+.|..++..++
T Consensus       161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g  239 (316)
T 1ijq_A          161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG  239 (316)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence            1122467899999877665 4456779999998753322222211111123455564 4556666667888999887655


Q ss_pred             eEEEEee
Q psy14961        255 CRVNHLM  261 (320)
Q Consensus       255 ~~~~~~~  261 (320)
                      ..+..+.
T Consensus       240 ~~~~~i~  246 (316)
T 1ijq_A          240 SDVNLLA  246 (316)
T ss_dssp             CCCEEEE
T ss_pred             cceEEEe
Confidence            5444443

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.23  E-value=0.081  Score=45.43  Aligned_cols=58  Identities=24%  Similarity=0.304  Sum_probs=36.5

Q ss_pred             eEEEEEecCCcEEEEEeCCCeEEEEcCCCCe------EEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961        225 ATSVDFSVSGRLLFAGYNDYTINVWDSLKCC------RVNHLMGHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       225 ~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~------~~~~~~~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ...++| .+|.++++....+.|...+.....      ....+..-...+..+++.|||.++++..
T Consensus       270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            345666 577777666667777776543221      1222322235789999999998877764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.23  E-value=0.074  Score=44.88  Aligned_cols=224  Identities=9%  Similarity=-0.025  Sum_probs=118.1

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCC----cceeeecccCc
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVES----SQLLQSFHGHT  107 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~----~~~~~~~~~~~  107 (320)
                      +|+.+.. ..|+..+++.....     .+.........+.|.+.++.|+.+. .++.|..+++++    ......+....
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~~~-----~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~   76 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSEYT-----SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI   76 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCCCE-----EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             EEEEECC-CeEEEEECCCcceE-----ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC
Confidence            3444433 45777777532211     1111223456788877666666554 468999999875    22111122111


Q ss_pred             cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc
Q psy14961        108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH  187 (320)
Q Consensus       108 ~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~  187 (320)
                      .....+++.+. .++..++-..++.|.+.|+.......                           .+.........++++
T Consensus        77 ~~p~glavd~~-~~~ly~~d~~~~~I~~~~~~g~~~~~---------------------------~~~~~~~~P~~iavd  128 (316)
T 1ijq_A           77 QAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVKRKT---------------------------LFRENGSKPRAIVVD  128 (316)
T ss_dssp             SCCCEEEEETT-TTEEEEEETTTTEEEEEETTSSSEEE---------------------------EEECTTCCEEEEEEE
T ss_pred             CCcCEEEEeec-CCeEEEEECCCCEEEEEeCCCCceEE---------------------------EEECCCCCcceEEeC
Confidence            23345555322 22333343455666666654321110                           011112245789999


Q ss_pred             CCCCEEEEeeC-C-CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEee--c
Q psy14961        188 PSGDAVATGSD-D-ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLM--G  262 (320)
Q Consensus       188 p~g~~l~s~s~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~--~  262 (320)
                      |.+..|+.+.. . +.|...+++.... ..+... .......++++|++..|+.+. ..+.|..+|.....+..-..  +
T Consensus       129 p~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~  206 (316)
T 1ijq_A          129 PVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK  206 (316)
T ss_dssp             TTTTEEEEEECSSSCEEEEEETTSCCE-EEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred             CCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC
Confidence            97665544433 3 6888888764332 222111 122357899999877776665 56789999875422211111  1


Q ss_pred             CCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        263 HENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       263 h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .......|++. .+.++++....+.|...+.
T Consensus       207 ~~~~P~giav~-~~~ly~~d~~~~~V~~~~~  236 (316)
T 1ijq_A          207 RLAHPFSLAVF-EDKVFWTDIINEAIFSANR  236 (316)
T ss_dssp             TTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred             ccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence            22345678885 4667777777788887774

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.22  E-value=0.096  Score=45.87  Aligned_cols=223  Identities=9%  Similarity=-0.044  Sum_probs=114.5

Q ss_pred             ccceEEEEEcCCCCEEEEe-cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCC
Q psy14961         19 ATWVMACAYAPSGSVVASG-GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~-~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~   96 (320)
                      ...+.+++|++.+..|.-+ ...+.|..++++.....................+++...++.|+.+ ...+.|.+.+++.
T Consensus       111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g  190 (400)
T 3p5b_L          111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  190 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred             cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence            3467889999866555544 4567788777643110001111111122334556666544455544 4567899988875


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      ......+.........+++.|.  +..|+....  .+.|...++......                           ..+
T Consensus       191 ~~~~~l~~~~~~~P~~iavdp~--~g~ly~td~~~~~~I~~~~~dG~~~~---------------------------~~~  241 (400)
T 3p5b_L          191 VKRKTLFRENGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGLNGVDIY---------------------------SLV  241 (400)
T ss_dssp             CSEEEEEECSSCCEEEEEEETT--TTEEEEEECSSSCCEEEEETTSCSCE---------------------------EEE
T ss_pred             CceEEEEeCCCCCcceEEEecc--cCeEEEEeCCCCCEEEEEeCCCCccE---------------------------EEE
Confidence            5433222222233455666543  344544432  245555554321110                           001


Q ss_pred             cCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961        175 EGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      ...-...+.|+++|++..|+.+ +..+.|..+|++...................+++ ..+.++.+-...+.|..+|..+
T Consensus       242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~  320 (400)
T 3p5b_L          242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLT  320 (400)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSS
T ss_pred             ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCC
Confidence            1112346789999887776554 5677899999875433322222111112234555 2445556666778888888666


Q ss_pred             CeEEEEeecCCCceeEEE
Q psy14961        254 CCRVNHLMGHENRVSCLQ  271 (320)
Q Consensus       254 ~~~~~~~~~h~~~i~~i~  271 (320)
                      +..+..+.........|+
T Consensus       321 G~~~~~i~~~~~~p~~i~  338 (400)
T 3p5b_L          321 GSDVNLLAENLLSPEDMV  338 (400)
T ss_dssp             CCCCEEEECSCSCEEEEE
T ss_pred             CCceEEEecCCCCCceEE
Confidence            655555544333344443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.19  E-value=0.012  Score=52.31  Aligned_cols=132  Identities=12%  Similarity=0.166  Sum_probs=76.3

Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC----eEEEEECCCCee-EeEEecCcceeeeEEEEEec
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA----TCRLFDLRADKE-VACYKKDSILFGATSVDFSV  232 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg----~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~  232 (320)
                      .|..+|+..+....... .......++++++|+.|+.+.. ++    .+...+...... ......   ...+..++++|
T Consensus       160 ~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~---~~~p~giavdp  235 (430)
T 3tc9_A          160 PTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTK---GQNCNGAETHP  235 (430)
T ss_dssp             EEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE---CSSCCCEEECT
T ss_pred             cEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeecc---CCCceEEEEeC
Confidence            44445554433222222 3345788999999996655543 22    233344322111 011111   11245678999


Q ss_pred             -CCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCC-eEEEecCCCceEeeecc
Q psy14961        233 -SGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESK  294 (320)
Q Consensus       233 -~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~  294 (320)
                       +|.++++-..++.|..++.......... .+.......|+|+|+|+ ++++-.....|+.++..
T Consensus       236 ~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          236 INGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             TTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence             6776666667889999998765432111 12224568999999999 56666678888887753

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.11  E-value=0.033  Score=47.11  Aligned_cols=116  Identities=12%  Similarity=0.029  Sum_probs=78.8

Q ss_pred             eEEEEE---cCCCCEEEEee-------------CCCeEEEEECC---CCeeEeEEecCc-----------ceeeeEEEEE
Q psy14961        181 VNSVKF---HPSGDAVATGS-------------DDATCRLFDLR---ADKEVACYKKDS-----------ILFGATSVDF  230 (320)
Q Consensus       181 v~~v~~---~p~g~~l~s~s-------------~dg~i~iwd~~---~~~~~~~~~~~~-----------~~~~~~~~~~  230 (320)
                      +..|.+   .|++..+++..             .+..+..+|+.   +++.+.......           ....+..+++
T Consensus        65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav  144 (334)
T 2p9w_A           65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ  144 (334)
T ss_dssp             EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred             eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence            467888   68876666433             26789999998   676654333211           1234678999


Q ss_pred             ecCCcEEEEEeCC-CeEEEEcCCCCeEEEEeec-----CCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        231 SVSGRLLFAGYND-YTINVWDSLKCCRVNHLMG-----HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       231 s~~~~~l~~g~~d-g~v~~wd~~~~~~~~~~~~-----h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .++|+..++++.. +.|...+............     ..-..+.|+++|||+.|+....++.+...+...+
T Consensus       145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          145 DRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             CTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             CCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence            9999999988877 8887777554322211111     1224679999999998888877999988887643

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.02  E-value=0.25  Score=47.27  Aligned_cols=209  Identities=9%  Similarity=-0.040  Sum_probs=104.7

Q ss_pred             ccceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCC
Q psy14961         19 ATWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~   96 (320)
                      ...+.+++|++.+..| .+-...+.|+.++++...........+.........+++...++.|+.+ ...+.|.+.+++.
T Consensus       423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG  502 (791)
T 3m0c_C          423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  502 (791)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence            3456789999855544 4445567788777653211001111111122334456666556555544 4568999999875


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      ......+.........|++.+.  ...|+.+..  .+.|.+.++.......                           .+
T Consensus       503 ~~~~~l~~~~l~~P~gIaVDp~--~g~LYwtD~g~~~~I~~~~~dG~~~~~---------------------------lv  553 (791)
T 3m0c_C          503 VKRKTLFRENGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGLNGVDIYS---------------------------LV  553 (791)
T ss_dssp             SSEEEEEECTTCCEEEEEEETT--TTEEEEEECSSSCEEEEEETTSCCEEE---------------------------EE
T ss_pred             CeEEEEEeCCCCCcceEEEecC--CCCEEEecCCCCCeEEEEecCCCceEE---------------------------EE
Confidence            4432222222233456666543  334544432  2456655554321110                           01


Q ss_pred             cCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961        175 EGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK  253 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~  253 (320)
                      ...-...+.|++++.+..|+.+ ...+.|...++....................+++. .+.+.++-...+.|...|..+
T Consensus       554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~t  632 (791)
T 3m0c_C          554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT  632 (791)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred             eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCC
Confidence            1112346789999876666544 45678999998754433333221111122344443 233444445667788777655


Q ss_pred             CeEE
Q psy14961        254 CCRV  257 (320)
Q Consensus       254 ~~~~  257 (320)
                      +..+
T Consensus       633 G~~~  636 (791)
T 3m0c_C          633 GSDV  636 (791)
T ss_dssp             CCCC
T ss_pred             Ccce
Confidence            5433

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.91  E-value=0.17  Score=43.38  Aligned_cols=206  Identities=10%  Similarity=0.035  Sum_probs=107.1

Q ss_pred             cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCc
Q psy14961         20 TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESS   97 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~   97 (320)
                      ....+++|++.+..|. +-...+.|..++++.....  .  ...........+++...++.|+.+ ...+.|.+.+++..
T Consensus        73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~  148 (349)
T 3v64_C           73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--E--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA  148 (349)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--E--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CceEEEEEeccccEEEEEeccCCceEEEecCCCCce--E--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence            3467889997655554 4445677887776432111  1  111111223456666545555544 45678999988754


Q ss_pred             ceeeecccCccceeEEEEeeCCCCCEEEEEe-CC-CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SD-KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~d-g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      .....+.........+++.|.  +..++.+. .+ +.|...++......                           ..+.
T Consensus       149 ~~~~l~~~~l~~P~~iavdp~--~g~ly~td~~~~~~I~r~~~dG~~~~---------------------------~~~~  199 (349)
T 3v64_C          149 HRKVLLWQSLEKPRAIALHPM--EGTIYWTDWGNTPRIEASSMDGSGRR---------------------------IIAD  199 (349)
T ss_dssp             SCEEEECTTCSCEEEEEEETT--TTEEEEEECSSSCEEEEEETTSCSCE---------------------------ESCC
T ss_pred             ceEEEEeCCCCCcceEEEecC--cCeEEEeccCCCCEEEEEeCCCCCcE---------------------------EEEE
Confidence            322222222233455666543  33444333 33 45555554321100                           0001


Q ss_pred             CCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..-...+.++++|++..|+ +-+..+.|..+|++...........  ...+..+++ ..+.+.++-...+.|..++..++
T Consensus       200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  276 (349)
T 3v64_C          200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  276 (349)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC--CCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence            1122457899998766664 4456788999998754322222211  112345556 35566666667788888875555


Q ss_pred             eEEEEee
Q psy14961        255 CRVNHLM  261 (320)
Q Consensus       255 ~~~~~~~  261 (320)
                      .....+.
T Consensus       277 ~~~~~i~  283 (349)
T 3v64_C          277 KNQEIIR  283 (349)
T ss_dssp             CSCEEEE
T ss_pred             CccEEec
Confidence            4444443

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.90  E-value=0.049  Score=44.46  Aligned_cols=118  Identities=9%  Similarity=0.093  Sum_probs=77.0

Q ss_pred             ecCCCCCeEEEEEcCCCCEEEE-eeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVAT-GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      +.+-...+..++++|+++.|++ ...++.|...|.. ++.+..++... ......+++.+++.++++.-.++.+.++++.
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            4455567999999998776654 6678889999987 66655554321 1234667788888877765567788888754


Q ss_pred             CCe---EEEEee------cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        253 KCC---RVNHLM------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       253 ~~~---~~~~~~------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ...   .+....      ........|+|+|+++.|.++..-...++|+.
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~  149 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV  149 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence            322   112221      22446799999998877666665444455554

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.84  E-value=0.11  Score=46.76  Aligned_cols=111  Identities=12%  Similarity=0.130  Sum_probs=67.6

Q ss_pred             CeEEEEE-------cCCCCEEEEeeCCC-------eEEEEECCC-CeeE-----eEEecCcceeeeEEEEEecC-CcEEE
Q psy14961        180 DVNSVKF-------HPSGDAVATGSDDA-------TCRLFDLRA-DKEV-----ACYKKDSILFGATSVDFSVS-GRLLF  238 (320)
Q Consensus       180 ~v~~v~~-------~p~g~~l~s~s~dg-------~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~s~~-~~~l~  238 (320)
                      ....++|       +++|++|+.+...+       .+.+.+... +...     ..+..   ...+..++++|+ +.+++
T Consensus       187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~~~p~giavdp~~g~LYv  263 (496)
T 3kya_A          187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---YKQCNGATIHPINGELYF  263 (496)
T ss_dssp             BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---ESCCCCEEECTTTCCEEE
T ss_pred             CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---CCCceEEEEcCCCCeEEE
Confidence            4788999       99999776665543       256665333 1111     11111   112356788995 45555


Q ss_pred             EEeCCCeEEEEcCC-------CCeE-----------EEEe--ecCCCceeEEEECcCCC-eEEEecCCCceEeeec
Q psy14961        239 AGYNDYTINVWDSL-------KCCR-----------VNHL--MGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEES  293 (320)
Q Consensus       239 ~g~~dg~v~~wd~~-------~~~~-----------~~~~--~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~  293 (320)
                      +-..++.|..+|..       ++..           ...+  .+....-..|+|+|+|+ ++++-+....|+..+.
T Consensus       264 td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~  339 (496)
T 3kya_A          264 NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY  339 (496)
T ss_dssp             EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence            66688899999975       3322           1122  12234568999999999 4666667788888653

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.80  E-value=0.2  Score=43.82  Aligned_cols=109  Identities=19%  Similarity=0.149  Sum_probs=73.1

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee------------EeEEecCcc----eeeeEEEEEecC---CcEEEEE
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKE------------VACYKKDSI----LFGATSVDFSVS---GRLLFAG  240 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~------------~~~~~~~~~----~~~~~~~~~s~~---~~~l~~g  240 (320)
                      .|..+..+|+|++||..+ +..|.|..++.+..            ...+.-...    ...+.++.|+|-   +..|++=
T Consensus        67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            567799999999998876 45899998873321            112222111    124678999985   5589999


Q ss_pred             eCCCeEEEEcCCCC--eEE--------EEeecCCCceeEEEECcCCCeEEE--ecCCCceE
Q psy14961        241 YNDYTINVWDSLKC--CRV--------NHLMGHENRVSCLQVSPDGTAFSS--GSWDTTLR  289 (320)
Q Consensus       241 ~~dg~v~~wd~~~~--~~~--------~~~~~h~~~i~~i~~s~~~~~l~s--~s~D~~ir  289 (320)
                      ..|++|++||+...  .+.        ..+......|.+++|.+++-.|..  .+..|-|.
T Consensus       146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred             ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence            99999999997652  122        111233467899999998766666  44667665

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.66  E-value=0.64  Score=46.57  Aligned_cols=111  Identities=10%  Similarity=0.021  Sum_probs=61.5

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC------CCEEEEEeC-CCeEEEEE
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS------DQQILTGSG-DCTCALWD   93 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~-dg~v~iwd   93 (320)
                      .|.+++...  .+++.+. ++.+.++.++..  ....... ..-...|.|+.+.+.      ..+++.|.. |++++|++
T Consensus       515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~--~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s  588 (1158)
T 3ei3_A          515 NISVASCNS--SQVVVAV-GRALYYLQIHPQ--ELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK  588 (1158)
T ss_dssp             CCCEEEECS--SEEEEEE-TTEEEEEEEETT--EEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred             EEEEEEeCC--CEEEEEE-CCEEEEEEeeCC--ceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence            344444332  3455554 577777776521  1111111 112457899988643      368889986 99999999


Q ss_pred             CCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         94 VESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        94 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      +.+.+.+....-. .....++.+.......+|..|-.||.+..+.
T Consensus       589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~  633 (1158)
T 3ei3_A          589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG  633 (1158)
T ss_dssp             TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred             CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence            9876554322211 1233344443222235778888888875444

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.60  E-value=0.46  Score=44.22  Aligned_cols=248  Identities=7%  Similarity=-0.013  Sum_probs=134.6

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCcccee
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELM  111 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~  111 (320)
                      +|+.+ ....|+..+++.....  ....+. .......+.|.+.++.|+.+. .++.|..++++.......+........
T Consensus         8 ~Ll~s-~~~~I~~i~l~~~~~~--~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~   83 (628)
T 4a0p_A            8 FLLFS-RRADIRRISLETNNNN--VAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE   83 (628)
T ss_dssp             EEEEE-ETTEEEEEESSCTTCE--EECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred             EEEEE-eCCcEEEEECCCCCcc--eEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence            34443 4467888887532211  111111 123466788887766766554 578898888875443322222122344


Q ss_pred             EEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC
Q psy14961        112 DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD  191 (320)
Q Consensus       112 ~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~  191 (320)
                      .+++.+. .++...+-...+.|.+.++........                           +...-.....|+++|...
T Consensus        84 GlAvD~~-~~~LY~tD~~~~~I~v~~~dG~~~~~l---------------------------~~~~l~~P~~iavdp~~G  135 (628)
T 4a0p_A           84 GMAVDWL-GKNLYWADTGTNRIEVSKLDGQHRQVL---------------------------VWKDLDSPRALALDPAEG  135 (628)
T ss_dssp             EEEEETT-TTEEEEEETTTTEEEEEETTSTTCEEE---------------------------ECSSCCCEEEEEEETTTT
T ss_pred             eEEEEeC-CCEEEEEECCCCEEEEEecCCCcEEEE---------------------------EeCCCCCcccEEEccCCC
Confidence            5655432 233333444455666666543211000                           001122357899999655


Q ss_pred             EEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCcee
Q psy14961        192 AVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVS  268 (320)
Q Consensus       192 ~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~  268 (320)
                      .|+-..  ..+.|...+++.........   ....+..+++++++..|+.+. ..+.|...|.....+ ..+...-....
T Consensus       136 ~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~  211 (628)
T 4a0p_A          136 FMYWTEWGGKPKIDRAAMDGSERTTLVP---NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPF  211 (628)
T ss_dssp             EEEEEECSSSCEEEEEETTSCSCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEE
T ss_pred             eEEEeCCCCCCEEEEEeCCCCceEEEEC---CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCce
Confidence            554443  35678888877544332222   122357889999877777665 567888888754333 22333333445


Q ss_pred             EEEECcCCCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEEEee
Q psy14961        269 CLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQ  318 (320)
Q Consensus       269 ~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (320)
                      +|++.. +.++++-...+.|..-+...--....+..+...| .||+|+-.
T Consensus       212 glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p-~~i~v~~~  259 (628)
T 4a0p_A          212 GLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYV-MDILVFHS  259 (628)
T ss_dssp             EEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSC-CEEEEECG
T ss_pred             EEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCc-ceeeeeee
Confidence            788765 5666776667888877743221223344344444 47777653

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.60  E-value=0.27  Score=41.48  Aligned_cols=220  Identities=7%  Similarity=-0.022  Sum_probs=115.7

Q ss_pred             CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceee-ecccCccceeEEEEee
Q psy14961         40 DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAP  117 (320)
Q Consensus        40 dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~  117 (320)
                      ...|+..+++......   ............+.|.+.++.|+-+. ..+.|..++++...... .+.........+++.+
T Consensus        12 ~~~I~~i~l~~~~~~~---~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~   88 (318)
T 3sov_A           12 RRDLRLVDATNGKENA---TIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW   88 (318)
T ss_dssp             EEEEEEEETTCTTSCC---EEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred             cCeEEEEECCCCceEE---EEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence            3567887775322111   01111122345677876555665544 56788888887653211 1111112233455433


Q ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee
Q psy14961        118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS  197 (320)
Q Consensus       118 ~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s  197 (320)
                      . .++.+.+-...+.|.++++......                           ..+.........++++|.+..|+.+.
T Consensus        89 ~-~g~ly~~d~~~~~I~~~~~dG~~~~---------------------------~l~~~~~~~P~giavdp~~g~ly~td  140 (318)
T 3sov_A           89 L-GEKLYWTDSETNRIEVSNLDGSLRK---------------------------VLFWQELDQPRAIALDPSSGFMYWTD  140 (318)
T ss_dssp             T-TTEEEEEETTTTEEEEEETTSCSCE---------------------------EEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred             C-CCeEEEEECCCCEEEEEECCCCcEE---------------------------EEEeCCCCCccEEEEeCCCCEEEEEe
Confidence            2 2333334444556666665432110                           00111223457899998766555444


Q ss_pred             --CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        198 --DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       198 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                        ..+.|...+++..........  .......++++|++..|+.+. ..+.|..+|.....+..-..+.......|++..
T Consensus       141 ~~~~~~I~r~~~dG~~~~~~~~~--~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~  218 (318)
T 3sov_A          141 WGEVPKIERAGMDGSSRFIIINS--EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE  218 (318)
T ss_dssp             CSSSCEEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET
T ss_pred             cCCCCEEEEEEcCCCCeEEEEEC--CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC
Confidence              357888888764332221111  122357899999777666664 567899998754322221222334556777753


Q ss_pred             CCCeEEEecCCCceEeeec
Q psy14961        275 DGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       275 ~~~~l~s~s~D~~ir~~~~  293 (320)
                       +.++.+-...+.|...+.
T Consensus       219 -~~lywtd~~~~~V~~~~~  236 (318)
T 3sov_A          219 -DILYWTDWSTHSILACNK  236 (318)
T ss_dssp             -TEEEEEETTTTEEEEEET
T ss_pred             -CEEEEEecCCCeEEEEEC
Confidence             456667667777877775

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.59  E-value=0.25  Score=40.95  Aligned_cols=96  Identities=14%  Similarity=0.109  Sum_probs=48.6

Q ss_pred             CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeEEE
Q psy14961        189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCRVN  258 (320)
Q Consensus       189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~~~  258 (320)
                      +++.++.|+.+     ..+..+|+.+.+=...-......... ++ ...++.+++.|+.+     ..+.+||..+..-..
T Consensus       159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  236 (301)
T 2vpj_A          159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGA-GV-ALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT  236 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EE-EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccc-eE-EEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence            45666776654     45888898765422211111111111 22 22367777887753     468889987654322


Q ss_pred             EeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        259 HLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       259 ~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      .-.-.......-++..++++++.|+.++
T Consensus       237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~  264 (301)
T 2vpj_A          237 VTSMTTPRCYVGATVLRGRLYAIAGYDG  264 (301)
T ss_dssp             ECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred             CCCCCCcccceeEEEECCEEEEEcCcCC
Confidence            1110111111112223778888888764

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.56  E-value=0.26  Score=40.96  Aligned_cols=94  Identities=11%  Similarity=0.126  Sum_probs=46.8

Q ss_pred             CCCEEEEeeC---------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961        189 SGDAVATGSD---------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC  254 (320)
Q Consensus       189 ~g~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~  254 (320)
                      +++.++.|+.         -..+.+||+.+.+=...-........ .++. ..++++++.|+.+     ..+.+||..+.
T Consensus       149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~  226 (306)
T 3ii7_A          149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-HGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLN  226 (306)
T ss_dssp             TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred             CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-ceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence            4555566653         34588899877642211111111111 1222 2267777777643     45788887664


Q ss_pred             eEE--EEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        255 CRV--NHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       255 ~~~--~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      .-.  ..+........++.+  ++++++.||.++
T Consensus       227 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~  258 (306)
T 3ii7_A          227 EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQG  258 (306)
T ss_dssp             EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCS
T ss_pred             cEEECCCCCCCccceeEEEE--CCEEEEEeCcCC
Confidence            322  111111111222333  778899998653

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.54  E-value=0.27  Score=40.77  Aligned_cols=64  Identities=16%  Similarity=0.198  Sum_probs=34.3

Q ss_pred             CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961        189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC  254 (320)
Q Consensus       189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~  254 (320)
                      ++..++.|+.+     ..+.+||+.+.+=...-...........+  ..++++++.|+.+     ..+..||..+.
T Consensus       206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            45666777654     46889998876422211111111111222  2367777777654     35677886654

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.36  E-value=0.47  Score=41.57  Aligned_cols=160  Identities=18%  Similarity=0.246  Sum_probs=92.8

Q ss_pred             CCCCEEEEEeCCCeEEEEECCCcceeeecccC----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC
Q psy14961         75 NSDQQILTGSGDCTCALWDVESSQLLQSFHGH----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH  150 (320)
Q Consensus        75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~  150 (320)
                      .++..++.+- ++.||.-++.....-+.++..    -..+..+.+  +++|++|+..+. ..|.+-.+..+.....    
T Consensus        30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvl--SpsG~lLAl~g~-~~V~Vv~LP~~~~~~~----  101 (452)
T 3pbp_A           30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVIS--STSGDLLCLFND-NEIFVMEVPWGYSNVE----  101 (452)
T ss_dssp             TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEE--CTTSSEEEEECS-SEEEEEECCTTCSCCC----
T ss_pred             cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEE--CCCCCEEEEecC-CeEEEEEecCccccCc----
Confidence            4555565554 467887776643322222221    225655554  667888887754 4788887764321100    


Q ss_pred             CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC---CCEEEEeeCCCeEEEEECCCC--eeEeEEecC------
Q psy14961        151 HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS---GDAVATGSDDATCRLFDLRAD--KEVACYKKD------  219 (320)
Q Consensus       151 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~---g~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~------  219 (320)
                      .......-.++.|.+...+     .....+|..+.|||-   +..|++-..|+.|++||+...  ++. .+.+.      
T Consensus       102 ~~~~~~~~q~~ty~l~~~~-----~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~  175 (452)
T 3pbp_A          102 DVSIQDAFQIFHYSIDEEE-----VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGL  175 (452)
T ss_dssp             CHHHHHTTEEEEEEGGGCC-------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEES
T ss_pred             ccccccccceeEEEcCCcc-----cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCC
Confidence            0000011234556554211     114578999999995   468999999999999999752  222 22111      


Q ss_pred             -cceeeeEEEEEecCCcEEEEEe--CCCeEEE
Q psy14961        220 -SILFGATSVDFSVSGRLLFAGY--NDYTINV  248 (320)
Q Consensus       220 -~~~~~~~~~~~s~~~~~l~~g~--~dg~v~~  248 (320)
                       .....+.+++|++++-.|...+  ..|.|.-
T Consensus       176 d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          176 DARVNDITDLEFSKDGLTLYCLNTTEGGDIFA  207 (452)
T ss_dssp             CSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred             CcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence             1113467899999887777755  7788754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.35  E-value=0.77  Score=43.94  Aligned_cols=197  Identities=9%  Similarity=-0.040  Sum_probs=104.7

Q ss_pred             ccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCc----ceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeC
Q psy14961         65 TSFISCCIFPNSDQQILTGS-GDCTCALWDVESS----QLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDM  138 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~  138 (320)
                      ...+..+.+....+.|+.+. ..+.|+.++++..    .....+.........+++.+  .+..|+ +-...+.|.+.++
T Consensus       423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~--~~~~LY~tD~~~~~I~v~~l  500 (791)
T 3m0c_C          423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW--IHSNIYWTDSVLGTVSVADT  500 (791)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET--TTTEEEEEETTTTEEEEEET
T ss_pred             CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee--cCCcEEEEecCCCeEEEEeC
Confidence            34556778876555665544 4578888887642    11222221223344555543  233343 4444556666665


Q ss_pred             CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-C-CCeEEEEECCCCeeEeEE
Q psy14961        139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-D-DATCRLFDLRADKEVACY  216 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~-dg~i~iwd~~~~~~~~~~  216 (320)
                      .......                           .+.........|+++|.+..|+... . .+.|...++.........
T Consensus       501 dG~~~~~---------------------------l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv  553 (791)
T 3m0c_C          501 KGVKRKT---------------------------LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV  553 (791)
T ss_dssp             TSSSEEE---------------------------EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred             CCCeEEE---------------------------EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence            4322111                           0111223467899999766555443 2 368888888754433222


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      ..  ....+..+++++.+..|+.+. ....|...++....+.......  -....+|++.. ++++++-...+.|+.-+.
T Consensus       554 ~~--~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk  630 (791)
T 3m0c_C          554 TE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR  630 (791)
T ss_dssp             CS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred             eC--CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeC
Confidence            21  122356789998777776664 4568888887544333222221  12334666643 355666666677776653

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.27  E-value=0.73  Score=42.81  Aligned_cols=133  Identities=10%  Similarity=0.056  Sum_probs=74.8

Q ss_pred             CeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe--CCCeEEEEcCCCCeE
Q psy14961        180 DVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY--NDYTINVWDSLKCCR  256 (320)
Q Consensus       180 ~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--~dg~v~~wd~~~~~~  256 (320)
                      ....+++++.+..| ++-...+.|.+.+++..........  ....+..++++|.+..|+...  ..+.|...++.....
T Consensus        85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~--~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~  162 (619)
T 3s94_A           85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR  162 (619)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeC--CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence            46789999965554 5556788999999876433222211  122356788999765555544  245676666543222


Q ss_pred             EEEeecCCCceeEEEECcCC-CeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEE
Q psy14961        257 VNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTV  315 (320)
Q Consensus       257 ~~~~~~h~~~i~~i~~s~~~-~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (320)
                      ..-....-...+.|++++++ +++++-+....|+..+.....++.+.......| .||++
T Consensus       163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P-~gi~~  221 (619)
T 3s94_A          163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP-FALTL  221 (619)
T ss_dssp             EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------C-CCEEE
T ss_pred             EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCc-eEEEE
Confidence            22122234567899999864 455555566778877765544444444344555 36554

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.26  E-value=0.027  Score=53.24  Aligned_cols=195  Identities=11%  Similarity=-0.012  Sum_probs=96.8

Q ss_pred             eEEEEecCCCCEEEEEe-CCCeEEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         68 ISCCIFPNSDQQILTGS-GDCTCALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        68 v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      ...+.|.+.++.|+.+. ..+.|+.+++.+    ......+.........+++.+. .++++++-...+.|.+.++....
T Consensus       408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~-~g~LY~tD~~~~~I~v~d~dg~~  486 (699)
T 1n7d_A          408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVK  486 (699)
T ss_dssp             CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS-SSBCEECCTTTSCEEEEBSSSCC
T ss_pred             eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee-CCcEEEEeccCCeEEEEecCCCc
Confidence            34566766666666654 457888888865    1211111111112233444221 22333333344556666654322


Q ss_pred             EEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-C-CCeEEEEECCCCeeEeEEecCc
Q psy14961        143 CVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-D-DATCRLFDLRADKEVACYKKDS  220 (320)
Q Consensus       143 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~-dg~i~iwd~~~~~~~~~~~~~~  220 (320)
                      ....                           +.........|+++|.+..|+.+. . .+.|...++...... .+... 
T Consensus       487 ~~~l---------------------------~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~~~-  537 (699)
T 1n7d_A          487 RKTL---------------------------FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTE-  537 (699)
T ss_dssp             EEEE---------------------------CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EESCS-
T ss_pred             eEEE---------------------------EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEEeC-
Confidence            1110                           111112235678888655554433 2 267877777543221 11111 


Q ss_pred             ceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCCeEEEEee--cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        221 ILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKCCRVNHLM--GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       221 ~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      .......++|+|++..|+.+ +..+.|..+++....+...+.  +.......|++..+ .++++....+.|...+.
T Consensus       538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~  612 (699)
T 1n7d_A          538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR  612 (699)
T ss_dssp             SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred             CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence            12234678899986655555 456789999875432221111  11122345666554 56667766778887774

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.25  E-value=0.4  Score=39.70  Aligned_cols=65  Identities=17%  Similarity=0.189  Sum_probs=34.9

Q ss_pred             CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC-----eEEEEcCCCCe
Q psy14961        189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-----TINVWDSLKCC  255 (320)
Q Consensus       189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-----~v~~wd~~~~~  255 (320)
                      ++..++.|+.+     ..+.+||+.+.+=...-......... .+ ...++++++.|+.++     .+.+||..+..
T Consensus       204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-GV-CAVNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EE-EEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC-eE-EEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence            45666777654     36888998765422111111111111 12 223677878877543     47888876543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.19  E-value=0.8  Score=42.53  Aligned_cols=85  Identities=7%  Similarity=0.008  Sum_probs=53.3

Q ss_pred             eEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecchHhhhhee
Q psy14961        225 ATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNRYVQYLL  302 (320)
Q Consensus       225 ~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~~~~~~~  302 (320)
                      +..++|++.+..|+... ..+.|.-++.............-.....||+.+ .++++.+-+..++|.+-+.....+..+.
T Consensus       351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~  430 (619)
T 3s94_A          351 AIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILI  430 (619)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred             cEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEE
Confidence            46788998666555554 577888888654333222222334677999986 5667777677788888876655554444


Q ss_pred             eeeeecC
Q psy14961        303 RSRITKP  309 (320)
Q Consensus       303 ~~~~~~~  309 (320)
                      ..++..|
T Consensus       431 ~~~l~~P  437 (619)
T 3s94_A          431 SEDLEEP  437 (619)
T ss_dssp             CTTCCSE
T ss_pred             ECCCCCe
Confidence            4344443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.06  E-value=0.51  Score=39.09  Aligned_cols=101  Identities=16%  Similarity=0.172  Sum_probs=50.8

Q ss_pred             CCCEEEEeeCC-------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeE
Q psy14961        189 SGDAVATGSDD-------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCR  256 (320)
Q Consensus       189 ~g~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~  256 (320)
                      +++.++.|+.+       ..+.+||+.+.+=...-......... ++. ..++++++.|+.+     ..+.+||..+..-
T Consensus       155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  232 (302)
T 2xn4_A          155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAW  232 (302)
T ss_dssp             TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred             CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc-cEE-EECCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence            45556666532       35888898765422111111111111 222 2367888887653     4688899776433


Q ss_pred             E--EEeecCCCceeEEEECcCCCeEEEecCCCc-----eEeeec
Q psy14961        257 V--NHLMGHENRVSCLQVSPDGTAFSSGSWDTT-----LRDEES  293 (320)
Q Consensus       257 ~--~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~-----ir~~~~  293 (320)
                      .  ..+......-.  +...++++++.|+.++.     +.++|.
T Consensus       233 ~~~~~~~~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~v~~yd~  274 (302)
T 2xn4_A          233 RQVADMNMCRRNAG--VCAVNGLLYVVGGDDGSCNLASVEYYNP  274 (302)
T ss_dssp             EEECCCSSCCBSCE--EEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred             eeCCCCCCccccCe--EEEECCEEEEECCcCCCcccccEEEEcC
Confidence            2  21111111111  22237888899987653     455554

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.06  E-value=0.51  Score=39.14  Aligned_cols=64  Identities=8%  Similarity=0.013  Sum_probs=34.0

Q ss_pred             CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961        189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC  254 (320)
Q Consensus       189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~  254 (320)
                      +++.++.|+.+     ..+.+||+.+.+=...-...........+.  -++.+++.|+.+     ..+..||..+.
T Consensus       200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA--VGSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE--ETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE--ECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence            45566666643     357889987653211111111111112222  267788888743     56888887664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=95.99  E-value=0.72  Score=40.23  Aligned_cols=223  Identities=9%  Similarity=-0.018  Sum_probs=118.1

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcc----eeeecccCc
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQ----LLQSFHGHT  107 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~----~~~~~~~~~  107 (320)
                      +|+.+. ...|+..+++....     ..+......+..+.|.+.++.|+.+. ..+.|+.++++...    ....+....
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~-----~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~  158 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEY-----TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI  158 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSC-----EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred             eeEEec-cceeEEEccCCcce-----eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence            444443 35677776643211     11222334567788887666666654 46788888876521    112122122


Q ss_pred             cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc
Q psy14961        108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH  187 (320)
Q Consensus       108 ~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~  187 (320)
                      .....+++.+. .+++..+-...+.|.+.++.......                           .+.........|+++
T Consensus       159 ~~p~glavD~~-~~~lY~~d~~~~~I~~~~~~g~~~~~---------------------------l~~~~~~~P~~iavd  210 (400)
T 3p5b_L          159 QAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVKRKT---------------------------LFRENGSKPRAIVVD  210 (400)
T ss_dssp             SCEEEEEEETT-TTEEEEEETTTTEEEEECTTTCSEEE---------------------------EEECSSCCEEEEEEE
T ss_pred             CCcccEEEEec-CCceEEEECCCCeEEEEeCCCCceEE---------------------------EEeCCCCCcceEEEe
Confidence            23344555432 23333343445566666654332111                           011122245789999


Q ss_pred             CCCCEEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeec--
Q psy14961        188 PSGDAVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMG--  262 (320)
Q Consensus       188 p~g~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~--  262 (320)
                      |.+..|+-..  ..+.|...+++..........  ....+..++++|++..|+.+. ..+.|..+|.....+......  
T Consensus       211 p~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~--~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~  288 (400)
T 3p5b_L          211 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK  288 (400)
T ss_dssp             TTTTEEEEEECSSSCCEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS
T ss_pred             cccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC--CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC
Confidence            9766655443  246888888875433222221  122357789998888777765 567899998754333222222  


Q ss_pred             CCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        263 HENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       263 h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .-....+|++ ..+.++.+....+.|+..+
T Consensus       289 ~l~~P~gl~v-~~~~lywtd~~~~~V~~~~  317 (400)
T 3p5b_L          289 RLAHPFSLAV-FEDKVFWTDIINEAIFSAN  317 (400)
T ss_dssp             TTSSEEEEEE-ETTEEEEEESSSCSEEEEE
T ss_pred             CCCCCEEEEE-eCCEEEEecCCCCeEEEEE
Confidence            2234457777 3455677776777787776

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.93  E-value=0.69  Score=39.59  Aligned_cols=59  Identities=17%  Similarity=0.195  Sum_probs=39.3

Q ss_pred             eEEEEE-------ecCCcEEEEEeCCCeEEEEcCCCC-eE--EEEee-cCCCceeEEEECcCCCeEEEec
Q psy14961        225 ATSVDF-------SVSGRLLFAGYNDYTINVWDSLKC-CR--VNHLM-GHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       225 ~~~~~~-------s~~~~~l~~g~~dg~v~~wd~~~~-~~--~~~~~-~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      +..+.|       ..+|.++++....+.|...+.... ..  ...+. +-...+..|++.|||.++++..
T Consensus       261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            456677       357877777777788888776532 22  12333 2235789999999998877764

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.87  E-value=0.71  Score=39.22  Aligned_cols=68  Identities=6%  Similarity=0.007  Sum_probs=34.5

Q ss_pred             CCCEEEEecCC-CeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeC-C---------CeEEEEECCCc
Q psy14961         30 SGSVVASGGLD-NKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSG-D---------CTCALWDVESS   97 (320)
Q Consensus        30 ~~~~l~s~~~d-g~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~-d---------g~v~iwd~~~~   97 (320)
                      ++.+++.||.+ ..+.+||+............+. .....-.++..  ++..++.|+. +         ..+.+||+.+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            66666766654 4677777642223333332222 11111222333  3556666665 2         46888998876


Q ss_pred             ce
Q psy14961         98 QL   99 (320)
Q Consensus        98 ~~   99 (320)
                      +-
T Consensus        97 ~W   98 (357)
T 2uvk_A           97 SW   98 (357)
T ss_dssp             EE
T ss_pred             cE
Confidence            53

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.80  E-value=0.79  Score=39.27  Aligned_cols=100  Identities=14%  Similarity=0.140  Sum_probs=63.1

Q ss_pred             CeEEEEEcCCCCEEEEee-----------------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-
Q psy14961        180 DVNSVKFHPSGDAVATGS-----------------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-  241 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s-----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-  241 (320)
                      ..+.+.+.++|...++..                 ..|.+..+|.  ++......   .......++||||++.|+.+. 
T Consensus       166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~---~l~~pNGia~spDg~~lYvadt  240 (355)
T 3sre_A          166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE---GFDFANGINISPDGKYVYIAEL  240 (355)
T ss_dssp             SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE---EESSEEEEEECTTSSEEEEEEG
T ss_pred             CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec---CCcccCcceECCCCCEEEEEeC
Confidence            578899999998766653                 1244555554  32111111   122357899999998887765 


Q ss_pred             CCCeEEEEcCCC-CeE--EEEeecCCCceeEEEECc-CCCeEEEecCC
Q psy14961        242 NDYTINVWDSLK-CCR--VNHLMGHENRVSCLQVSP-DGTAFSSGSWD  285 (320)
Q Consensus       242 ~dg~v~~wd~~~-~~~--~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D  285 (320)
                      ..+.|..|+... +..  ...+ ......-.+++.+ +|++.+++..+
T Consensus       241 ~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          241 LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred             CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence            578899998642 221  2223 2345678899999 59988877654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=95.78  E-value=1.2  Score=41.33  Aligned_cols=136  Identities=14%  Similarity=0.210  Sum_probs=80.9

Q ss_pred             CeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecC----cceeeeEEEEEecCCcEEE-EEeCCCeEEEEcCCC
Q psy14961        180 DVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKD----SILFGATSVDFSVSGRLLF-AGYNDYTINVWDSLK  253 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~-~g~~dg~v~~wd~~~  253 (320)
                      .+..++|++.++.|+ +=...+.|..++++...........    .....+..+++...+..|+ +-+..+.|.+.++..
T Consensus       341 ~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G  420 (628)
T 4a0p_A          341 NVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG  420 (628)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC
Confidence            466889988665554 4445678888887643322222110    0112356788888766554 555678899988754


Q ss_pred             CeEEEEee-cCCCceeEEEECc-CCCeEEEecCCC--ceEeeecchHhhhheeeeeeecCCcceEEEe
Q psy14961        254 CCRVNHLM-GHENRVSCLQVSP-DGTAFSSGSWDT--TLRDEESKNRYVQYLLRSRITKPTQGLTVYF  317 (320)
Q Consensus       254 ~~~~~~~~-~h~~~i~~i~~s~-~~~~l~s~s~D~--~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (320)
                      . ....+. .......+|++.| +|.++.+-....  .|...+.....++.+...++..| .||++..
T Consensus       421 ~-~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P-~gla~D~  486 (628)
T 4a0p_A          421 R-SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKP-IALALDS  486 (628)
T ss_dssp             C-EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCE-EEEEEET
T ss_pred             C-eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCc-cEEEEeC
Confidence            3 333333 3456789999999 777777654333  34444444444444555556666 7887764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=95.73  E-value=0.73  Score=38.32  Aligned_cols=94  Identities=14%  Similarity=0.109  Sum_probs=47.7

Q ss_pred             CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeEEE
Q psy14961        189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCRVN  258 (320)
Q Consensus       189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~~~  258 (320)
                      ++..++.|+.+     ..+.++|+.+.+=...-...........+.  -++++++.|+.+     ..+.+||..+..-..
T Consensus       168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~  245 (308)
T 1zgk_A          168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTF  245 (308)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence            45666666654     458888887654221111111111112222  267777887654     568889976653321


Q ss_pred             --EeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        259 --HLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       259 --~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                        .+......-..+.  -++++++.||.++
T Consensus       246 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~  273 (308)
T 1zgk_A          246 VAPMKHRRSALGITV--HQGRIYVLGGYDG  273 (308)
T ss_dssp             CCCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred             CCCCCCCccceEEEE--ECCEEEEEcCcCC
Confidence              1111111112222  3678889888664

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=95.53  E-value=0.026  Score=44.76  Aligned_cols=104  Identities=9%  Similarity=0.032  Sum_probs=61.5

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-----eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-----FGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      .+..++|+|+|...+.  .+|.+.-.+..+......+.....+     .....+.|.|+|.+.++  .||.|.-++.-+.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            4568999999885555  6777666665442211111110000     01256789999988777  5698887764221


Q ss_pred             eEE-----EEeecC--CCceeEEEECcCCCeEEEecCCCceE
Q psy14961        255 CRV-----NHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       255 ~~~-----~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                      ...     .+..+-  =..+..|.|.|+|.+.+..  |+.+.
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly  157 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY  157 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence            110     111111  1467999999999988877  67653

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.51  E-value=1  Score=38.56  Aligned_cols=110  Identities=7%  Similarity=0.057  Sum_probs=64.6

Q ss_pred             eEEEEEcC--CCC-EEEEe-eC--CCeEEEEECCCCe--e--EeEEecCcceeeeEEEEEecCCcEEEEEe---------
Q psy14961        181 VNSVKFHP--SGD-AVATG-SD--DATCRLFDLRADK--E--VACYKKDSILFGATSVDFSVSGRLLFAGY---------  241 (320)
Q Consensus       181 v~~v~~~p--~g~-~l~s~-s~--dg~i~iwd~~~~~--~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---------  241 (320)
                      ...+.+.+  +|. +|+.+ ..  +.++.+|++....  .  +..+.. ........+.+.++|.+.++..         
T Consensus       114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~  192 (355)
T 3sre_A          114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYATNDHYFIDPYLK  192 (355)
T ss_dssp             EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred             eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence            44566655  343 34333 33  5678888765432  1  112222 2334567899999999888754         


Q ss_pred             --------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEE-ecCCCceEeeecc
Q psy14961        242 --------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSS-GSWDTTLRDEESK  294 (320)
Q Consensus       242 --------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s-~s~D~~ir~~~~~  294 (320)
                              ..|.|.-+|....   ..+...-..-+.|+||||++.|.. -+..+.|+.++..
T Consensus       193 ~~e~~~~~~~g~vyr~d~~~~---~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~  251 (355)
T 3sre_A          193 SWEMHLGLAWSFVTYYSPNDV---RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH  251 (355)
T ss_dssp             HHHHHTTCCCEEEEEECTTCC---EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             cchhhccCCccEEEEEECCeE---EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence                    1245555665322   222222345689999999976554 4567888888864

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.37  E-value=0.61  Score=39.88  Aligned_cols=101  Identities=13%  Similarity=0.117  Sum_probs=59.4

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC---cceeeeEEEEEecC---CcEEEEEeC-C-----CeEE
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---SILFGATSVDFSVS---GRLLFAGYN-D-----YTIN  247 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~s~~---~~~l~~g~~-d-----g~v~  247 (320)
                      .-..++|.|+|+.+++ ..+|.|.+++  .++........   ........++|+|+   +..|+++.. .     +.|.
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            3468999999985554 5669999998  33321111111   01124578999998   555555543 2     5677


Q ss_pred             EEcCCCC-----eEE-EEee---cCCCceeEEEECcCCCeEEEec
Q psy14961        248 VWDSLKC-----CRV-NHLM---GHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       248 ~wd~~~~-----~~~-~~~~---~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      .|+....     +.+ ..+.   +.......|+|.|||.++++-+
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence            7775432     112 1122   1112346899999998877754

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=94.98  E-value=1.4  Score=37.07  Aligned_cols=228  Identities=11%  Similarity=0.090  Sum_probs=110.2

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc-ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT-VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ..+.++.|.+++..++.| ..|.|  |.............. .......+..+.+.+  +.++.++.++.|.. ..+.++
T Consensus        36 ~~~~~v~~~~~~~~~~~G-~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~~g~i~~-S~DgG~  109 (327)
T 2xbg_A           36 ATILDMSFIDRHHGWLVG-VNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGEPPIMLH-TTDGGQ  109 (327)
T ss_dssp             SCEEEEEESSSSCEEEEE-TTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEETTEEEE-ESSTTS
T ss_pred             CcEEEEEECCCCcEEEEc-CCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEECCCeEEE-ECCCCC
Confidence            468899998888777754 56654  322211222222111 111234577788864  34555566665543 223333


Q ss_pred             eeeecc---cCccceeEEEEeeCCCCCEEEEEeCCCeE-EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961         99 LLQSFH---GHTGELMDLDLAPSETGNTFVSGSSDKLV-NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus        99 ~~~~~~---~~~~~v~~~~~~~~~~~~~l~s~~~dg~i-~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      --....   .+.+.+..+.+..  ++..++ ++.++.| +-.|  .|+.                   |..     +  .
T Consensus       110 tW~~~~~~~~~~~~~~~i~~~~--~~~~~~-~~~~g~v~~S~D--gG~t-------------------W~~-----~--~  158 (327)
T 2xbg_A          110 SWSQIPLDPKLPGSPRLIKALG--NGSAEM-ITNVGAIYRTKD--SGKN-------------------WQA-----L--V  158 (327)
T ss_dssp             SCEECCCCTTCSSCEEEEEEEE--TTEEEE-EETTCCEEEESS--TTSS-------------------EEE-----E--E
T ss_pred             CceECccccCCCCCeEEEEEEC--CCCEEE-EeCCccEEEEcC--CCCC-------------------CEE-----e--e
Confidence            211111   1223444454432  334444 3344433 1111  1110                   110     0  0


Q ss_pred             cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       175 ~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      .++...+..+++.|++.+++.+...+..+-.|-. ++.-...... .......+.+++++..++. +.+|.+.+.+...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G  235 (327)
T 2xbg_A          159 QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRT-TSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNS  235 (327)
T ss_dssp             CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECC-SSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEE
T ss_pred             cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCC-CCCccceeEECCCCCEEEE-eCCceEEEecCCCC
Confidence            1233467889999988877766544444444421 1111111111 1123466778888876644 45787777632212


Q ss_pred             eEEEEee----cCCCceeEEEECcCCCeEEEecCCCce
Q psy14961        255 CRVNHLM----GHENRVSCLQVSPDGTAFSSGSWDTTL  288 (320)
Q Consensus       255 ~~~~~~~----~h~~~i~~i~~s~~~~~l~s~s~D~~i  288 (320)
                      ..-..+.    .+...+.++++.+++.+++.+. ++.+
T Consensus       236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i  272 (327)
T 2xbg_A          236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL  272 (327)
T ss_dssp             EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred             CeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence            2111111    1234688999999888777665 5655

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=94.84  E-value=0.66  Score=39.72  Aligned_cols=102  Identities=11%  Similarity=0.038  Sum_probs=58.7

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe-eEeEEec-CcceeeeEEEEEecC---CcEEEEEeC----C----CeE
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADK-EVACYKK-DSILFGATSVDFSVS---GRLLFAGYN----D----YTI  246 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~-~~~~~~~~~~~~s~~---~~~l~~g~~----d----g~v  246 (320)
                      ....++|.|+|+.++ +..+|.|.++|. .++ .+..... .........++|+|+   +..|++...    +    ..|
T Consensus        30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v  107 (354)
T 3a9g_A           30 VPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV  107 (354)
T ss_dssp             CEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred             CCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence            457899999997544 456699999973 343 1111110 001123567899998   555555443    2    567


Q ss_pred             EEEcCCCC-------eEE-EEeec-CCCceeEEEECcCCCeEEEec
Q psy14961        247 NVWDSLKC-------CRV-NHLMG-HENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       247 ~~wd~~~~-------~~~-~~~~~-h~~~i~~i~~s~~~~~l~s~s  283 (320)
                      ..|+....       +.+ ..+.. .......|+|.|||.++++-+
T Consensus       108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred             EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence            66764432       111 11221 112347899999999888754

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.74  E-value=1.5  Score=36.32  Aligned_cols=64  Identities=14%  Similarity=0.151  Sum_probs=33.7

Q ss_pred             CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961        189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC  254 (320)
Q Consensus       189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~  254 (320)
                      ++..++.|+.+     ..+.+||+.+.+=............ .++.. .++++++.|+.+     ..+.+||..+.
T Consensus       215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA-LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc-eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence            45666777654     4688999876542211111111111 12222 367777777643     35777776654

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.70  E-value=1.1  Score=39.81  Aligned_cols=105  Identities=10%  Similarity=0.085  Sum_probs=59.4

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc------ceeeeEEEEEecC---CcEEEEEeC--------
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS------ILFGATSVDFSVS---GRLLFAGYN--------  242 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~s~~---~~~l~~g~~--------  242 (320)
                      ....|+|.|+|+.+++-...+.|++++...++.........      ...+...++|+|+   +..|+....        
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~  107 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence            45689999999977765544578888765443322111111      1123457899996   555555442        


Q ss_pred             -----CCeEEEEcCCC--C-----eEEEE-ee-cCCCceeEEEECcCCCeEEEecC
Q psy14961        243 -----DYTINVWDSLK--C-----CRVNH-LM-GHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       243 -----dg~v~~wd~~~--~-----~~~~~-~~-~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                           ...|.-|+...  .     +.+.. +. ........|+|.|||+++++.+.
T Consensus       108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                 12444444321  1     11211 21 11234789999999998887654

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=94.65  E-value=3  Score=39.27  Aligned_cols=231  Identities=14%  Similarity=0.173  Sum_probs=104.8

Q ss_pred             CCCCEEEEecCC----CeEEEEEecccCCcccccc-c-----ccccccCeEEEEecCCCCEEEEEeCC------CeEEEE
Q psy14961         29 PSGSVVASGGLD----NKVTVYAIALEDDSSAKKK-T-----VATHTSFISCCIFPNSDQQILTGSGD------CTCALW   92 (320)
Q Consensus        29 ~~~~~l~s~~~d----g~i~v~~~~~~~~~~~~~~-~-----~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iw   92 (320)
                      .++.+++.||.+    ..+.+||...  ....... .     +......-.++....++..++.|+.+      ..+.+|
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~--~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y  473 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHY--DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF  473 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECS--SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCC--CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence            567777778753    4577777642  2222221 1     11111112233332255666777643      357788


Q ss_pred             ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      |+.+..-... .....+....+.+...++..++.|+.++  .+.+||..+......-.                  .+. 
T Consensus       474 d~~t~~W~~~-~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~------------------~g~-  533 (695)
T 2zwa_A          474 DMKTREWSMI-KSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP------------------KDE-  533 (695)
T ss_dssp             ETTTTEEEEC-CCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC------------------SSG-
T ss_pred             eCCCCcEEEC-CCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC------------------CCC-
Confidence            8877543221 1111111111112112466777776554  56777776654221100                  000 


Q ss_pred             eeeecCCCCCeEEEEEcCC-CCEEEEeeC--C-----CeEEEEECCCCee-----EeEEecC-cceeeeEEEEEecCCcE
Q psy14961        171 VQSFEGHQSDVNSVKFHPS-GDAVATGSD--D-----ATCRLFDLRADKE-----VACYKKD-SILFGATSVDFSVSGRL  236 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p~-g~~l~s~s~--d-----g~i~iwd~~~~~~-----~~~~~~~-~~~~~~~~~~~s~~~~~  236 (320)
                         .......-.++.+..+ +..++.|+.  +     +.+..||+.+.+-     ....... .......++....++.+
T Consensus       534 ---~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~i  610 (695)
T 2zwa_A          534 ---FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKL  610 (695)
T ss_dssp             ---GGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEE
T ss_pred             ---CCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEE
Confidence               0001111123455554 556667765  2     4588899887651     1111111 11111123333344778


Q ss_pred             EEEEeC--------CCeEEEEcCCCCeEEEE-eecC------CCce-eEEEECcCCCeEEEecC
Q psy14961        237 LFAGYN--------DYTINVWDSLKCCRVNH-LMGH------ENRV-SCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       237 l~~g~~--------dg~v~~wd~~~~~~~~~-~~~h------~~~i-~~i~~s~~~~~l~s~s~  284 (320)
                      ++.|+.        ...+.+||..+..-... +...      ...+ .+.+.-+++++++.||.
T Consensus       611 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg  674 (695)
T 2zwa_A          611 LIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG  674 (695)
T ss_dssp             EEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred             EEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence            888773        34688999876543310 0000      0000 23344456688888874

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=94.60  E-value=1.9  Score=36.78  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=60.6

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC----cceeeeEEEEEecC---CcEEEEEe---CCCeEEEE
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD----SILFGATSVDFSVS---GRLLFAGY---NDYTINVW  249 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~s~~---~~~l~~g~---~dg~v~~w  249 (320)
                      ....|+|.|+|..+++--..|.|++++...++........    ....+...++|+|+   +..|+...   .++.|.-|
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~  112 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM  112 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence            4578999999997776655899999986554432111111    11124567899995   34454432   34455555


Q ss_pred             cCCC----------CeEE-EEee-cCCCceeEEEECcCCCeEEEecC
Q psy14961        250 DSLK----------CCRV-NHLM-GHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       250 d~~~----------~~~~-~~~~-~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                      ....          .+.+ ..+. +.......|+|.|||.++++.+.
T Consensus       113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred             EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence            4322          1222 1221 11123567999999998888653

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=93.78  E-value=3.3  Score=36.49  Aligned_cols=200  Identities=12%  Similarity=0.162  Sum_probs=105.9

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeee
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQS  102 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~  102 (320)
                      +.-.+|..+.||--. ...+.||+++.    ..+.+.....+..+.=-|.+++  .|+--. +..|.-|+++. ..+.+.
T Consensus        70 sAIMnP~~~iiALra-g~~lQiFnle~----K~klks~~~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kv  141 (494)
T 1bpo_A           70 SAIMNPASKVIALKA-GKTLQIFNIEM----KSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKM  141 (494)
T ss_dssp             EEEECSSSSCEEEEE-TTEEEEEETTT----TEEEEEEECSSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEE
T ss_pred             eeeeCCCCcEEEEec-CCeEEEEchHH----hhhhcceecCCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhh
Confidence            345788888887765 67999999853    2222223333333333333432  333332 45899999864 355555


Q ss_pred             cccCcc--ceeEEEEeeCCCCCEEEEEeC-------CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961        103 FHGHTG--ELMDLDLAPSETGNTFVSGSS-------DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus       103 ~~~~~~--~v~~~~~~~~~~~~~l~s~~~-------dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      +..|..  ..--+.+..+++.++++..+-       .|.+.+|....+.                            .+.
T Consensus       142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----------------------------sQ~  193 (494)
T 1bpo_A          142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----------------------------SQP  193 (494)
T ss_dssp             EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----------------------------EEE
T ss_pred             eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----------------------------cch
Confidence            554432  223355666777787764431       2344555543321                            222


Q ss_pred             ecCCCCCeEEEEEcCC---CCEEEEeeC---CCeEEEEECCCC---ee------EeE-EecCcceeeeEEEEEecCCcEE
Q psy14961        174 FEGHQSDVNSVKFHPS---GDAVATGSD---DATCRLFDLRAD---KE------VAC-YKKDSILFGATSVDFSVSGRLL  237 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~---g~~l~s~s~---dg~i~iwd~~~~---~~------~~~-~~~~~~~~~~~~~~~s~~~~~l  237 (320)
                      ++||...-.++.+.-+   ...++.+..   .++++|-++...   .+      +.. ++.+...--..++.+|+.-..+
T Consensus       194 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygvi  273 (494)
T 1bpo_A          194 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV  273 (494)
T ss_dssp             ECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEE
T ss_pred             heeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEE
Confidence            3333221111111100   011222222   368899888532   11      111 1111111123567788888888


Q ss_pred             EEEeCCCeEEEEcCCCCeEEEE
Q psy14961        238 FAGYNDYTINVWDSLKCCRVNH  259 (320)
Q Consensus       238 ~~g~~dg~v~~wd~~~~~~~~~  259 (320)
                      +.-+.-|.+++||+.++..+..
T Consensus       274 yviTK~G~i~lyDleTgt~i~~  295 (494)
T 1bpo_A          274 FLITKYGYIHLYDLETGTCIYM  295 (494)
T ss_dssp             EEEETTSEEEEEETTTCCEEEE
T ss_pred             EEEecCceEEEEecccceeeee
Confidence            8999999999999999887743

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=93.73  E-value=4.6  Score=41.18  Aligned_cols=201  Identities=13%  Similarity=0.191  Sum_probs=98.7

Q ss_pred             EEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeeec
Q psy14961         25 CAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQSF  103 (320)
Q Consensus        25 ~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~  103 (320)
                      ...+|..+.||--. ...+.||+++..    .+.+...... .|..=.|-.+...-+++  +..|.-|++.. ..+...+
T Consensus        71 AIMnP~~~iiALra-g~~lQiFnl~~k----~klks~~~~e-~VvfWkWis~~~l~lVT--~~aVyHW~~~~~s~P~k~f  142 (1630)
T 1xi4_A           71 AIMNPASKVIALKA-GKTLQIFNIEMK----SKMKAHTMTD-DVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKMF  142 (1630)
T ss_pred             hccCCCcceEEEec-CCeEEEeehHHh----hhhcccccCC-CceEEEecCCCeeEEEc--CCeEEEeccCCCCccHHHH
Confidence            34688888777654 678999998532    2222222223 34333443333232222  45899999964 3455555


Q ss_pred             ccCcc--ceeEEEEeeCCCCCEEEEEe-------CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961        104 HGHTG--ELMDLDLAPSETGNTFVSGS-------SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF  174 (320)
Q Consensus       104 ~~~~~--~v~~~~~~~~~~~~~l~s~~-------~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~  174 (320)
                      ..|..  ..--+....+++.++++..+       ..|.+.+|....+. .+.++||.....   .            ..+
T Consensus       143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~---~------------~~~  206 (1630)
T 1xi4_A          143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA---Q------------FKM  206 (1630)
T ss_pred             hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh---e------------ecc
Confidence            44421  12224555566777766433       23455555543321 122222221110   0            001


Q ss_pred             cCCC--CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC---eeEe------E-EecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961        175 EGHQ--SDVNSVKFHPSGDAVATGSDDATCRLFDLRAD---KEVA------C-YKKDSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       175 ~~~~--~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~---~~~~------~-~~~~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                      .+..  ..+.|.+..  ..      ..+.++|-++...   .+..      . ++.+...--+.++..|+.-..+..-+.
T Consensus       207 ~~~~~~~~l~~f~~~--~~------~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk  278 (1630)
T 1xi4_A          207 EGNAEESTLFCFAVR--GQ------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK  278 (1630)
T ss_pred             CCCCCCceEEEEEEe--cC------CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEec
Confidence            1111  112222221  10      1257888887432   1110      0 111111111345667777778888889


Q ss_pred             CCeEEEEcCCCCeEE
Q psy14961        243 DYTINVWDSLKCCRV  257 (320)
Q Consensus       243 dg~v~~wd~~~~~~~  257 (320)
                      -|-+.+||+.++..+
T Consensus       279 ~G~~~~~d~~t~~~i  293 (1630)
T 1xi4_A          279 YGYIHLYDLETGTCI  293 (1630)
T ss_pred             CceEEEEecccchhh
Confidence            999999999887654

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=93.56  E-value=3.7  Score=36.37  Aligned_cols=21  Identities=33%  Similarity=0.640  Sum_probs=14.9

Q ss_pred             ecCCCceeEEEECcCCCeEEEe
Q psy14961        261 MGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       261 ~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      .+|.+ ...++|+|+|+++++-
T Consensus       225 ~G~RN-p~gla~dp~G~L~~~d  245 (454)
T 1cru_A          225 LGHRN-PQGLAFTPNGKLLQSE  245 (454)
T ss_dssp             BCCSE-EEEEEECTTSCEEEEE
T ss_pred             ECCCC-cceEEECCCCCEEEEe
Confidence            35554 5799999988876553

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=93.05  E-value=3.4  Score=35.18  Aligned_cols=101  Identities=12%  Similarity=0.043  Sum_probs=51.2

Q ss_pred             CeEEEEEcCC---CCEE-EEeeC-------CCeEEEEECCCCe-----eEeEEecCc----ceeeeEEEEEecCCcEEEE
Q psy14961        180 DVNSVKFHPS---GDAV-ATGSD-------DATCRLFDLRADK-----EVACYKKDS----ILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       180 ~v~~v~~~p~---g~~l-~s~s~-------dg~i~iwd~~~~~-----~~~~~~~~~----~~~~~~~~~~s~~~~~l~~  239 (320)
                      ....|+++|+   +..| ++-+.       ...|..+++....     ....+....    .......+.|.|||.+.++
T Consensus        67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~  146 (353)
T 2g8s_A           67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA  146 (353)
T ss_dssp             SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred             CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence            4678999995   4444 43322       2356666654321     111111111    1111356899999975555


Q ss_pred             EeC-------------CCeEEEEcCCCC-------------eEEEEeecCCCceeEEEECc-CCCeEEE
Q psy14961        240 GYN-------------DYTINVWDSLKC-------------CRVNHLMGHENRVSCLQVSP-DGTAFSS  281 (320)
Q Consensus       240 g~~-------------dg~v~~wd~~~~-------------~~~~~~~~h~~~i~~i~~s~-~~~~l~s  281 (320)
                      -+.             .|.|.-.+....             .....-.+|.+ ...++|+| +|+++++
T Consensus       147 ~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l~~~  214 (353)
T 2g8s_A          147 LGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNALWLN  214 (353)
T ss_dssp             ECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEEEEE
T ss_pred             ECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCEEEE
Confidence            332             245665654321             11111234443 57899999 6766554

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.66  E-value=3.8  Score=33.95  Aligned_cols=52  Identities=13%  Similarity=0.104  Sum_probs=26.0

Q ss_pred             CCCEEEEeeCCC-----eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961        189 SGDAVATGSDDA-----TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN  242 (320)
Q Consensus       189 ~g~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  242 (320)
                      +++.++.|+.++     .+.+||+.+.+=...-......... ++. ..++++++.|+.
T Consensus       196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~  252 (315)
T 4asc_A          196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL-SLV-SLVGTLYAIGGF  252 (315)
T ss_dssp             TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEEEEE
T ss_pred             CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce-eEE-EECCEEEEECCc
Confidence            456667776544     5788888765322111111111111 222 236777777765

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=92.63  E-value=0.64  Score=42.17  Aligned_cols=107  Identities=15%  Similarity=0.166  Sum_probs=67.1

Q ss_pred             eEEEEEcCCCCEEEEee-CCCeEEEEECCCCee-----E----e-EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961        181 VNSVKFHPSGDAVATGS-DDATCRLFDLRADKE-----V----A-CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVW  249 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~-----~----~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~w  249 (320)
                      ...+..+|||++++.++ .+.++.++|+..-..     +    . .........+..-.+|+++|....+-.-|.+|.-|
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW  404 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW  404 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence            35788999999986665 588999999863111     0    0 01111123456778999999655666789999999


Q ss_pred             cCCCC----------eEEEEeecCCCceeEEE------ECcCCCeEEEec---CCCce
Q psy14961        250 DSLKC----------CRVNHLMGHENRVSCLQ------VSPDGTAFSSGS---WDTTL  288 (320)
Q Consensus       250 d~~~~----------~~~~~~~~h~~~i~~i~------~s~~~~~l~s~s---~D~~i  288 (320)
                      ++...          ..+..+.-|-.+- .+.      -.|||++|++..   .|+.+
T Consensus       405 ni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~lnK~skdrfl  461 (638)
T 3sbq_A          405 NMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALSKFSKDRFL  461 (638)
T ss_dssp             EHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEESCCTTSSC
T ss_pred             eccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEecccccccCc
Confidence            86532          2334444443322 222      257899998874   45544

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.50  E-value=4  Score=33.81  Aligned_cols=93  Identities=12%  Similarity=0.068  Sum_probs=46.2

Q ss_pred             CCCEEEEeeC-C-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC-----eEEEEcCCCCeEE
Q psy14961        189 SGDAVATGSD-D-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-----TINVWDSLKCCRV  257 (320)
Q Consensus       189 ~g~~l~s~s~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-----~v~~wd~~~~~~~  257 (320)
                      +++.++.|+. +     ..+.++|+.+.+=...-........ .++. ..++++++.|+.++     .+..||..+..-.
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  225 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL-FGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA  225 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhc-eEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence            4556667765 2     4688899876532111111111111 1222 23677777777543     5778887665332


Q ss_pred             --EEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961        258 --NHLMGHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       258 --~~~~~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                        ..+......-..+  .-++++++.||.+
T Consensus       226 ~~~~~p~~r~~~~~~--~~~~~l~v~GG~~  253 (315)
T 4asc_A          226 PFEAFPQERSSLSLV--SLVGTLYAIGGFA  253 (315)
T ss_dssp             EECCCSSCCBSCEEE--EETTEEEEEEEEE
T ss_pred             ECCCCCCcccceeEE--EECCEEEEECCcc
Confidence              2111111111222  2367888888874

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=92.29  E-value=5.6  Score=35.07  Aligned_cols=203  Identities=17%  Similarity=0.191  Sum_probs=115.2

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc----cCeEEEEecCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT----SFISCCIFPNSD   77 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~   77 (320)
                      -|.|+++..++.++.+++. |.=..|-.+. .|+-.. +..+..|+++.+..   ..+.+..|.    ..|..-...++.
T Consensus        89 QiFnle~K~klks~~~~e~-VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~  162 (494)
T 1bpo_A           89 QIFNIEMKSKMKAHTMTDD-VTFWKWISLN-TVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQ  162 (494)
T ss_dssp             EEEETTTTEEEEEEECSSC-CCEEEEEETT-EEEEEC-SSEEEEEESSSSCC---CEEEEECCGGGTTCEEEEEEECTTS
T ss_pred             EEEchHHhhhhcceecCCC-ceEEEecCCC-eEEEEc-CCeeEEecccCCCC---chhheecchhcccceEEEEEECCCC
Confidence            3778888888888887754 4444454443 344443 35799999854221   222222232    223333446667


Q ss_pred             CEEEEEe-------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCC---CeEEEEeCCCC---c-
Q psy14961         78 QQILTGS-------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSD---KLVNIWDMRTG---Y-  142 (320)
Q Consensus        78 ~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~d---g~i~lwd~~~~---~-  142 (320)
                      ++++..+       -.|.+.+|..+.+ ..+.+.+|-+.-..+.+...+....|+ .+...   +.+++-++...   . 
T Consensus       163 kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~  241 (494)
T 1bpo_A          163 KWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ  241 (494)
T ss_dssp             SEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC
T ss_pred             CeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC
Confidence            7765322       2478889998754 345667776544333332111112233 33322   67888887432   1 


Q ss_pred             -----EEEEe-c--------------cCC---ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        143 -----CVQSF-E--------------GHH---NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       143 -----~~~~~-~--------------~~~---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                           .+..+ .              ...   ..++.-|.+++||++++.++..-+--...|..-+.+++..-++...+.
T Consensus       242 ~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~  321 (494)
T 1bpo_A          242 PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK  321 (494)
T ss_dssp             CCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred             CccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccC
Confidence                 11100 0              001   123567899999999999988766556677777776666667777788


Q ss_pred             CeEEEEECCCCe
Q psy14961        200 ATCRLFDLRADK  211 (320)
Q Consensus       200 g~i~iwd~~~~~  211 (320)
                      |.|.-..++...
T Consensus       322 GqVl~v~v~e~~  333 (494)
T 1bpo_A          322 GQVLSVCVEEEN  333 (494)
T ss_dssp             CEEEEEEECTTT
T ss_pred             ceEEEEEEcccc
Confidence            877776665543

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=92.22  E-value=10  Score=37.97  Aligned_cols=251  Identities=16%  Similarity=0.261  Sum_probs=121.9

Q ss_pred             cCCCCEEEEecCCCeEEEEEecccCCccc--ccccc----cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc----
Q psy14961         28 APSGSVVASGGLDNKVTVYAIALEDDSSA--KKKTV----ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS----   97 (320)
Q Consensus        28 ~~~~~~l~s~~~dg~i~v~~~~~~~~~~~--~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----   97 (320)
                      ..++.+++-+..+|.+....+..++....  ....+    ......-.|+.+.. ++.++.|+..|.=.+|.++..    
T Consensus       283 ~~~~~~~LL~~~~G~l~~l~l~~d~~~~~~~~V~~l~i~~~~~~~~~ssl~~l~-~g~lFvgS~~Gds~l~~~~~~~~~~  361 (1158)
T 3ei3_A          283 DPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLD-NGVVFVGSRLGDSQLVKLNVDSNEQ  361 (1158)
T ss_dssp             STTSSEEEEEETTCEEEEEEEEEEC-----CEEEEEEEEEEEECSCCSEEEECS-TTEEEEECSSSCEEEEEECSSCCTT
T ss_pred             ecCCCEEEEEeCCCCEEEEEEEEcCCccCceeEEEEEEEEcCCccCccEEEEEC-CCEEEEEEecCCcEEEEEecCCCCc
Confidence            34566777777899988776654332110  11111    11222334566654 458999999888888876543    


Q ss_pred             ----ceeeecccCccceeEEEEeeCC--CCCEEEEEe---CCCeEEEEeCCCCcE-EEEeccCCccccCCCeEEEEECcC
Q psy14961         98 ----QLLQSFHGHTGELMDLDLAPSE--TGNTFVSGS---SDKLVNIWDMRTGYC-VQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        98 ----~~~~~~~~~~~~v~~~~~~~~~--~~~~l~s~~---~dg~i~lwd~~~~~~-~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                          ..+..+. .-++|.++++....  ....+++++   .+|.+++..-.-+.. ...++       -.+.-.+|-++.
T Consensus       362 ~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~-------l~gv~~iWtl~~  433 (1158)
T 3ei3_A          362 GSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASID-------LPGIKGLWPLRS  433 (1158)
T ss_dssp             SCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEEC-------CCSCCEEEEECC
T ss_pred             cceEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEeec-------CCCccEEEEEee
Confidence                2234443 35778777665321  123455443   467777764211111 00110       001122222211


Q ss_pred             ----------------CeeeeeecCCCCCeEEE---EEcCCCCEEEEe----------eCCCeEEEEECCCCeeEeEEec
Q psy14961        168 ----------------GYCVQSFEGHQSDVNSV---KFHPSGDAVATG----------SDDATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       168 ----------------~~~~~~~~~~~~~v~~v---~~~p~g~~l~s~----------s~dg~i~iwd~~~~~~~~~~~~  218 (320)
                                      ...+..+.+  ..+..+   .|..+...|+++          ... .|++.+......+..+..
T Consensus       434 ~~~~~~~~yLvlS~~~~T~Vl~i~~--e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~-~Irli~~~~~~~~~~w~~  510 (1158)
T 3ei3_A          434 DPNRETDDTLVLSFVGQTRVLMLNG--EEVEETELMGFVDDQQTFFCGNVAHQQLIQITSA-SVRLVSQEPKALVSEWKE  510 (1158)
T ss_dssp             CSSCSSCCEEEEEETTEEEEEEEET--TEEEEECCTTCCSSSCEEEEEEETTTEEEEEESS-CEEEEESSSCCEEEEECC
T ss_pred             cCCCCCCCEEEEECCCCeEEEEEeC--CcccccccccccCCCCcEEEEEcCCCeEEEEecC-EEEEEECCCCeEEEEEEC
Confidence                            111111111  011111   112233344433          322 355666544434433332


Q ss_pred             CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcC------CCeEEEecC-CCceEe
Q psy14961        219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPD------GTAFSSGSW-DTTLRD  290 (320)
Q Consensus       219 ~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~------~~~l~s~s~-D~~ir~  290 (320)
                      ... ..+..++.  ++.+++.+. ++.+..+++..+.... .-..-...|.|+++.|.      ++++|.|.+ |+++|+
T Consensus       511 p~~-~~I~~As~--n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I  586 (1158)
T 3ei3_A          511 PQA-KNISVASC--NSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI  586 (1158)
T ss_dssp             TTC-CCCCEEEE--CSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEE
T ss_pred             CCC-CEEEEEEe--CCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEE
Confidence            211 11233332  345666665 6778777655432211 11223568999999863      468999997 999999


Q ss_pred             eecc
Q psy14961        291 EESK  294 (320)
Q Consensus       291 ~~~~  294 (320)
                      ....
T Consensus       587 ~sL~  590 (1158)
T 3ei3_A          587 LKLP  590 (1158)
T ss_dssp             EETT
T ss_pred             EECC
Confidence            9874

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=92.17  E-value=4.5  Score=33.65  Aligned_cols=88  Identities=9%  Similarity=-0.017  Sum_probs=47.6

Q ss_pred             EEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC--CeEEEEcCCCCeEEEEe
Q psy14961        184 VKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND--YTINVWDSLKCCRVNHL  260 (320)
Q Consensus       184 v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d--g~v~~wd~~~~~~~~~~  260 (320)
                      .+++|+++.|+-.+. ...|..-++..+.....+.. .     ....++|++.+|+-....  ..|..-++....+ ..+
T Consensus       150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-~-----~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~L  222 (302)
T 3s25_A          150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC-N-----CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVL  222 (302)
T ss_dssp             CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS-C-----EEEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EEC
T ss_pred             eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-C-----ccceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEE
Confidence            345777887765544 56788888877654433321 1     112356888888776533  3454445443322 222


Q ss_pred             ecCCCceeEEEECcCCCeEEEe
Q psy14961        261 MGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       261 ~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      .  +..+  ..|+|++++|.-+
T Consensus       223 t--~~~~--~~~~~~g~~Iy~~  240 (302)
T 3s25_A          223 T--EANI--EHYNVYGSLIFYQ  240 (302)
T ss_dssp             S--CSCE--EEEEEETTEEEEE
T ss_pred             e--CCCc--ceEEECCCEEEEE
Confidence            2  1222  3366777766544

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=91.80  E-value=5.5  Score=33.90  Aligned_cols=74  Identities=9%  Similarity=0.016  Sum_probs=41.8

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc----cccccccCeEEEEecCC---CCEEEEE---eCCCeEE
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK----TVATHTSFISCCIFPNS---DQQILTG---SGDCTCA   90 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~---~~~l~s~---~~dg~v~   90 (320)
                      .-+.++|.|||.++++--..|.|++++....  ......    ...........++++++   +..|+..   ..++.|.
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g--~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTG--RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTC--CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCC--cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            4478999999998777765898888753211  111111    11122345667888774   3455543   2344555


Q ss_pred             EEECCC
Q psy14961         91 LWDVES   96 (320)
Q Consensus        91 iwd~~~   96 (320)
                      -|.+..
T Consensus       111 R~~~~~  116 (347)
T 3das_A          111 RMLYDE  116 (347)
T ss_dssp             EEEBCT
T ss_pred             EEEeCC
Confidence            555543

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.64  E-value=2.5  Score=35.83  Aligned_cols=116  Identities=9%  Similarity=0.090  Sum_probs=67.7

Q ss_pred             CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCC
Q psy14961        122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDA  200 (320)
Q Consensus       122 ~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg  200 (320)
                      ..++.++.||.|.-+|..+|+....++...                ..+.....+....       .++..++.. ..||
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~----------------~~p~~~~~~~~~~-------~~~~~~vv~p~~dG   67 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN----------------FQPLIEIQEPSRL-------ETYETLIIEPFGDG   67 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGG----------------SCCSEECCCSCTT-------TSSEEEEECCSTTT
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCc----------------cCCcEEecCCccc-------cCCcEEEEEECCCC
Confidence            478999999999999999998766553220                0011111111100       123333333 5799


Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEe-----------cCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFS-----------VSGRLLFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s-----------~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      .+..++..++.....+...... ...-+...           ..+..+++|+.+|.+...|+.+++.+-++.
T Consensus        68 ~l~a~~~~~G~~~~~~~~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           68 NIYYFNAHQGLQKLPLSIRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             EEEEEETTTEEEEEEEEHHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             EEEEEECCCCcEEeeeccccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            9999998776543322221111 00001111           145678899999999999999998887664

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.44  E-value=5.9  Score=33.56  Aligned_cols=98  Identities=8%  Similarity=0.076  Sum_probs=59.8

Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEE--eCCCeEEEEeCCCCcEEEEecc-----
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSG--SSDKLVNIWDMRTGYCVQSFEG-----  149 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~--~~dg~i~lwd~~~~~~~~~~~~-----  149 (320)
                      ..++.++.||.|.-.|.++|+.+..++... .+.....-...+.+..++.+  +.||.|..+|..+|.....+.-     
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~   90 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS   90 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence            478899999999999999999888776431 22211110011112234443  6899999999887754332210     


Q ss_pred             -------------------CCc---cccCCCeEEEEECcCCeeeeeec
Q psy14961        150 -------------------HHN---LITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus       150 -------------------~~~---~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                                         ...   ..+.++.+...|+++|+.+.++.
T Consensus        91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence                               000   11234567778899998887764

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=91.09  E-value=6.5  Score=33.39  Aligned_cols=58  Identities=14%  Similarity=0.243  Sum_probs=37.7

Q ss_pred             eEEEEEec-------CCcEEEEEeCCCeEEEEcCCCCeEEEE--ee-cCCCceeEEEECcCCCeEEEe
Q psy14961        225 ATSVDFSV-------SGRLLFAGYNDYTINVWDSLKCCRVNH--LM-GHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       225 ~~~~~~s~-------~~~~l~~g~~dg~v~~wd~~~~~~~~~--~~-~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      +..+.|..       +|.++++....+.|...++........  +. .....+..|++.|||.++++.
T Consensus       273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t  340 (353)
T 2g8s_A          273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT  340 (353)
T ss_dssp             EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred             cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence            44566653       577777777778887777654433322  22 223478999999999977753

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=90.31  E-value=6  Score=35.15  Aligned_cols=106  Identities=10%  Similarity=0.052  Sum_probs=57.8

Q ss_pred             eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCe---eEeEEecCc-------ceeeeEEEEEecC---CcEEEEEeC---C
Q psy14961        181 VNSVKFHPSGD-AVATGSDDATCRLFDLRADK---EVACYKKDS-------ILFGATSVDFSVS---GRLLFAGYN---D  243 (320)
Q Consensus       181 v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~---~~~~~~~~~-------~~~~~~~~~~s~~---~~~l~~g~~---d  243 (320)
                      -..|+|.|+|. .|+.+...|.|++++.....   .+.......       ...+...++|+|+   ..+|++...   +
T Consensus        16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~   95 (463)
T 2wg3_C           16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE   95 (463)
T ss_dssp             EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred             ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence            46899999996 45556788999999754321   111111000       0124567899996   233333321   1


Q ss_pred             ----------CeEEEEcCC----------CCeEEEEee--cCCCceeEEEECcCCCeEEEecCCC
Q psy14961        244 ----------YTINVWDSL----------KCCRVNHLM--GHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       244 ----------g~v~~wd~~----------~~~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                                ..|.-|...          +.+.+..+.  ........|+|.|||+++++.+..+
T Consensus        96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C           96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence                      133334332          112333332  1122468999999999888776543

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=89.75  E-value=7.7  Score=39.62  Aligned_cols=200  Identities=17%  Similarity=0.175  Sum_probs=102.7

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc----cCeEEEEecCCCC
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT----SFISCCIFPNSDQ   78 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~   78 (320)
                      |.|+++..++.++.+++ .|.=..|-.+.. |+-.+ +..|..|++....   .+...+..|.    ..|..-..+++.+
T Consensus        90 iFnl~~k~klks~~~~e-~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s---~P~k~fdR~~~L~~~QIinY~~d~~~k  163 (1630)
T 1xi4_A           90 IFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQK  163 (1630)
T ss_pred             EeehHHhhhhcccccCC-CceEEEecCCCe-eEEEc-CCeEEEeccCCCC---ccHHHHhcchhcccCeeEEeeeCCCCC
Confidence            56677666666666654 344445544443 33333 3579999985321   2222233332    2233333456666


Q ss_pred             EEEEEe-------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC----CCeEEEEeCCCC---cE-
Q psy14961         79 QILTGS-------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS----DKLVNIWDMRTG---YC-  143 (320)
Q Consensus        79 ~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~----dg~i~lwd~~~~---~~-  143 (320)
                      +++..|       -.|.+.+|..+.+ ..+.+.+|-+.-..+.+...+....+++-..    .+.+++-++...   .. 
T Consensus       164 W~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~  242 (1630)
T 1xi4_A          164 WLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQP  242 (1630)
T ss_pred             eEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCC
Confidence            655322       3588999988754 3355666655444333322222223333222    257888877332   10 


Q ss_pred             -----EEE-ecc--------------CC---ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC
Q psy14961        144 -----VQS-FEG--------------HH---NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA  200 (320)
Q Consensus       144 -----~~~-~~~--------------~~---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg  200 (320)
                           +.. +.+              ..   ..++.-|.+.++|+.++.++..-+--...|...+-++...-++...+.|
T Consensus       243 f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G  322 (1630)
T 1xi4_A          243 FPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKG  322 (1630)
T ss_pred             CccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCc
Confidence                 000 000              00   1235678899999999988765443344555444444434455555666


Q ss_pred             eEEEEECCC
Q psy14961        201 TCRLFDLRA  209 (320)
Q Consensus       201 ~i~iwd~~~  209 (320)
                      .|.-..++.
T Consensus       323 ~vl~v~v~~  331 (1630)
T 1xi4_A          323 QVLSVCVEE  331 (1630)
T ss_pred             eEEEEEEcc
Confidence            665555543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=87.78  E-value=8.9  Score=30.38  Aligned_cols=112  Identities=13%  Similarity=-0.004  Sum_probs=56.9

Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcccee------EEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM------DLDLAPSETGNTFVSGSSDKLVNIWDMRT  140 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~------~~~~~~~~~~~~l~s~~~dg~i~lwd~~~  140 (320)
                      .+..+.|.|++. |++. .+|.+.-.+..+..... +.+....|-      -.++..+++|.+.++  .||.|.-++-.+
T Consensus        42 ~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           42 NFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             cceeEEECCCcc-EEEE-eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            567899999776 4444 67776666654422111 111011110      012344677876666  568887776432


Q ss_pred             CcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEE
Q psy14961        141 GYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF  205 (320)
Q Consensus       141 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iw  205 (320)
                      ..       ....+..           +..+.  ..-=..+..|.+.|+|.+.+..  |+.+.-.
T Consensus       117 ~~-------~~~Wl~~-----------a~~vg--~~gw~~~~~lff~p~G~Lyav~--dg~lyr~  159 (236)
T 1tl2_A          117 SD-------TDNWIAR-----------ATEVG--SGGWSGFKFLFFHPNGYLYAVH--GQQFYKA  159 (236)
T ss_dssp             ST-------TCCHHHH-----------SEEEE--CSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred             CC-------CCceecc-----------ccEec--cCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence            11       0011000           01110  0011357899999999866655  7775433

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=87.44  E-value=4.3  Score=34.26  Aligned_cols=11  Identities=0%  Similarity=-0.018  Sum_probs=6.3

Q ss_pred             eEEEEECCCcc
Q psy14961         88 TCALWDVESSQ   98 (320)
Q Consensus        88 ~v~iwd~~~~~   98 (320)
                      .+.+||+++.+
T Consensus       286 ~~~~yd~~~~~  296 (357)
T 2uvk_A          286 STDIHLWHNGK  296 (357)
T ss_dssp             CCEEEECC---
T ss_pred             eEEEEecCCCc
Confidence            57788987654

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=86.65  E-value=12  Score=30.79  Aligned_cols=94  Identities=13%  Similarity=0.152  Sum_probs=45.6

Q ss_pred             CCCEEEEeeC------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeE-
Q psy14961        189 SGDAVATGSD------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCR-  256 (320)
Q Consensus       189 ~g~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~-  256 (320)
                      ++..++.|+.      -..+.++|+.+.+=...-........ .++. ..++++++.|+.+     ..+.+||..+.+- 
T Consensus       158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  235 (318)
T 2woz_A          158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE  235 (318)
T ss_dssp             TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred             CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence            4556666653      23588899877542211111111111 1222 2367777777643     3567788765432 


Q ss_pred             -EEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        257 -VNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       257 -~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                       +..+......-..  ...++++++.||.+.
T Consensus       236 ~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~  264 (318)
T 2woz_A          236 VMTEFPQERSSISL--VSLAGSLYAIGGFAM  264 (318)
T ss_dssp             ECCCCSSCCBSCEE--EEETTEEEEECCBCC
T ss_pred             ECCCCCCcccceEE--EEECCEEEEECCeec
Confidence             2222111111112  224678888888754

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=82.88  E-value=18  Score=29.68  Aligned_cols=92  Identities=11%  Similarity=0.114  Sum_probs=41.8

Q ss_pred             EeecccceeEEEEEeC--ccceEEEEEcCCCCEEEEecC----CCe-------EEEEEecccCCcccccccccccccCeE
Q psy14961          3 IWDGLTQTKEHSVTMP--ATWVMACAYAPSGSVVASGGL----DNK-------VTVYAIALEDDSSAKKKTVATHTSFIS   69 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~--~~~V~~~~~~~~~~~l~s~~~----dg~-------i~v~~~~~~~~~~~~~~~~~~h~~~v~   69 (320)
                      .+|..+++-.. ..++  ...........++.+++.||.    ++.       +.+||..  .........+........
T Consensus        28 ~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~  104 (318)
T 2woz_A           28 AYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV--SSEWVGLPPLPSARCLFG  104 (318)
T ss_dssp             EEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT--TTEEEECSCBSSCBCSCE
T ss_pred             EECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC--CCcEEECCCCCccccccc
Confidence            55666655332 2222  111122334567777777773    121       4555543  223322222222111122


Q ss_pred             EEEecCCCCEEEEEeCC-------CeEEEEECCCcce
Q psy14961         70 CCIFPNSDQQILTGSGD-------CTCALWDVESSQL   99 (320)
Q Consensus        70 ~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~   99 (320)
                      ++..  ++..++.|+.+       ..+.+||+.+.+-
T Consensus       105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W  139 (318)
T 2woz_A          105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW  139 (318)
T ss_dssp             EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE
T ss_pred             eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCE
Confidence            2323  45566677653       3577888877643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	320
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-36
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	9e-22
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-18
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-15
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-27
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-24
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-12
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	9e-23
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-19
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	9e-16
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-19
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-17
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-15
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-13
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	9e-16
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-11
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	7e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-15
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-14
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.003
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-13
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-08
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-12
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	8e-09
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	5e-08
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	8e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	8e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-10
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-10
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-10
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-07
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	7e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-10
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-08
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-10
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-04
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	5e-10
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-08
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	9e-08
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-06
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-04
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-07
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	6e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.001
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	6e-06
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	4e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	0.001
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	4e-04

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  130 bits (326), Expect = 7e-36
 Identities = 102/285 (35%), Positives = 152/285 (53%), Gaps = 20/285 (7%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
            + A  +     ++ S   D K+ ++       ++ K   +   +S++  C +  S   +
Sbjct: 57  KIYAMHWGTDSRLLVSASQDGKLIIWDS----YTTNKVHAIPLRSSWVMTCAYAPSGNYV 112

Query: 81  LTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR 139
             G  D  C+++++++ +          G    L        N  V+ S D    +WD+ 
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172

Query: 140 TGYCVQSFEGHHNLIT---------------DDKLVNIWDMRTGYCVQSFEGHQSDVNSV 184
           TG    +F GH   +                 D    +WD+R G C Q+F GH+SD+N++
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232

Query: 185 KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY 244
            F P+G+A ATGSDDATCRLFDLRAD+E+  Y  D+I+ G TSV FS SGRLL AGY+D+
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292

Query: 245 TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
             NVWD+LK  R   L GH+NRVSCL V+ DG A ++GSWD+ L+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 91.7 bits (226), Expect = 9e-22
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 19/160 (11%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           HT  +         +  ++G+ D +  LWDV      Q+F GH  ++  +   P+  GN 
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN--GNA 240

Query: 124 FVSGSSDKLVNIWDMRTGYCVQ--------------SFEGHHNLI---TDDKLVNIWDMR 166
           F +GS D    ++D+R    +               SF     L+    DD   N+WD  
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300

Query: 167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
                    GH + V+ +     G AVATGS D+  ++++
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.3 bits (199), Expect = 5e-18
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 4/137 (2%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
             +WD        + T   + + A  + P+G+  A+G  D    ++ +    D      +
Sbjct: 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL--RADQELMTYS 265

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
                  I+   F  S + +L G  D  C +WD   +       GH   +  L +     
Sbjct: 266 HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD-- 323

Query: 121 GNTFVSGSSDKLVNIWD 137
           G    +GS D  + IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 72.1 bits (175), Expect = 7e-15
 Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 20/250 (8%)

Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           ++T+  H + I    +    + +++ S D    +WD  ++  + +    +  +M    AP
Sbjct: 48  RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107

Query: 118 SETGNTFVSGSSDKLVNIWD----------------MRTGYCVQSFEGHHNLITDDKLVN 161
           S          +   +                         C    +      + D    
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167

Query: 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI 221
           +WD+ TG    +F GH  DV S+   P      +G+ DA+ +L+D+R       +     
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE- 226

Query: 222 LFGATSVDFSVSGRLLFAGYNDYTINV--WDSLKCCRVNHLMGHENRVSCLQVSPDGTAF 279
                ++ F  +G     G +D T  +    + +             ++ +  S  G   
Sbjct: 227 -SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285

Query: 280 SSGSWDTTLR 289
            +G  D    
Sbjct: 286 LAGYDDFNCN 295

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.9 bits (107), Expect = 3e-06
 Identities = 11/90 (12%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD 229
             ++  GH + + ++ +      + + S D    ++D     +V      S      +  
Sbjct: 47  TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCA 104

Query: 230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNH 259
           ++ SG  +  G  D   ++++         
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVR 134

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (263), Expect = 5e-27
 Identities = 55/311 (17%), Positives = 107/311 (34%), Gaps = 57/311 (18%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN----- 75
            V    + P  SV+ S   D  + V+      ++   ++T+  HT  +    F +     
Sbjct: 19  PVTRVIFHPVFSVMVSASEDATIKVWDY----ETGDFERTLKGHTDSVQDISFDHSGKLL 74

Query: 76  -------------------------------------SDQQILTGSGDCTCALWDVESSQ 98
                                                +   I++ S D T  +W+V++  
Sbjct: 75  ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 134

Query: 99  LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK 158
            +++F GH   +  +   P++ G    S S+D+ V +W + T  C      H +++    
Sbjct: 135 CVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECIS 192

Query: 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK 218
                         S     +   + K    G  + +GS D T +++D+     +     
Sbjct: 193 WAPESSY-------SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 245

Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278
                    V F   G+ + +  +D T+ VWD      +  L  HE+ V+ L        
Sbjct: 246 HD--NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 303

Query: 279 FSSGSWDTTLR 289
             +GS D T++
Sbjct: 304 VVTGSVDQTVK 314

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.0 bits (245), Expect = 2e-24
 Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 31/263 (11%)

Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
           K  ++ H S ++  IF      +++ S D T  +WD E+    ++  GHT  + D+    
Sbjct: 10  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69

Query: 118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-------------ITDDKLVNIWD 164
           S       S      +  +             H+                + DK + +W+
Sbjct: 70  SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129

Query: 165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD----- 219
           ++TGYCV++F GH+  V  V+ +  G  +A+ S+D T R++ +   +  A  ++      
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189

Query: 220 -------------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENR 266
                        S   G+ +      G  L +G  D TI +WD      +  L+GH+N 
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249

Query: 267 VSCLQVSPDGTAFSSGSWDTTLR 289
           V  +     G    S + D TLR
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLR 272

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.5 bits (150), Expect = 9e-12
 Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 31/207 (14%)

Query: 97  SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITD 156
                +  GH   +  +   P    +  VS S D  + +WD  TG   ++ +GH + + D
Sbjct: 7   PPEKYALSGHRSPVTRVIFHPV--FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

Query: 157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY 216
               +   +                                                   
Sbjct: 65  ISFDHSGKLLASCSADMTIKLWDF-----------------------------QGFECIR 95

Query: 217 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG 276
                    +SV    +G  + +   D TI +W+      V    GH   V  ++ + DG
Sbjct: 96  TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 155

Query: 277 TAFSSGSWDTTLRDEESKNRYVQYLLR 303
           T  +S S D T+R      +  +  LR
Sbjct: 156 TLIASCSNDQTVRVWVVATKECKAELR 182

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.3 bits (235), Expect = 9e-23
 Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 60/335 (17%)

Query: 7   LTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAI--------------ALED 52
           L ++ +H+     + V    ++  G  +A+G  +    VY +              A +D
Sbjct: 55  LHKSLDHT-----SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD 108

Query: 53  DSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMD 112
             +    +  +   +I    F    + + TG+ D    +WD+E+ +++    GH  ++  
Sbjct: 109 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYS 168

Query: 113 LDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDD 157
           LD     +G+  VSGS D+ V IWD+RTG C  +      +                + D
Sbjct: 169 LD--YFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD 226

Query: 158 KLVNIWDMRTGYC-------VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD 210
           + V +WD  TG+         +S  GH+  V SV F   G +V +GS D + +L++L+  
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286

Query: 211 KEVACYKKDSILF----------GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL 260
              +  K  +                SV  + +   + +G  D  +  WD      +  L
Sbjct: 287 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 346

Query: 261 MGHENRVSCLQV------SPDGTAFSSGSWDTTLR 289
            GH N V  + V       P+   F++GS D   R
Sbjct: 347 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 381

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 85.2 bits (209), Expect = 3e-19
 Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 34/221 (15%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAI---ALEDDSSAK 57
           + IWD  T     ++++             G  +A+G LD  V V+      L +   ++
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246

Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMD----- 112
            ++   H   +   +F    Q +++GS D +  LW+++++              +     
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306

Query: 113 -----LDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT 167
                L +A ++     +SGS D+ V  WD ++G  +   +GH N +    +        
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV-------- 358

Query: 168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR 208
                         N     P  +  ATGS D   R++  +
Sbjct: 359 -------------ANGSSLGPEYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.8 bits (182), Expect = 9e-16
 Identities = 62/330 (18%), Positives = 110/330 (33%), Gaps = 51/330 (15%)

Query: 8   TQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSF 67
            Q   HS  +P   +   + +           ++   +Y  AL  +   +      HTS 
Sbjct: 7   NQRANHSKPIPPFLLDLDSQSVP--DALKKQTNDYYILYNPALPREIDVELHKSLDHTSV 64

Query: 68  ISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMD--------------- 112
           + C  F N  + + TG  + T  ++ V    L+      +    D               
Sbjct: 65  VCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 123

Query: 113 -LDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156
              +  S  G    +G+ D+L+ IWD+     V   +GH   I               + 
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183

Query: 157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY 216
           D+ V IWD+RTG C  +                G  +A GS D   R++D      V   
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 243

Query: 217 KKDSILFGA-----TSVDFSVSGRLLFAGYNDYTINVWD------------SLKCCRVNH 259
             ++           SV F+  G+ + +G  D ++ +W+                     
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT 303

Query: 260 LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
            +GH++ V  +  + +     SGS D  + 
Sbjct: 304 YIGHKDFVLSVATTQNDEYILSGSKDRGVL 333

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (205), Expect = 7e-19
 Identities = 53/282 (18%), Positives = 96/282 (34%), Gaps = 57/282 (20%)

Query: 58  KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAP 117
            K +  H   +  C+      +I++GS D T  +W   + + L++  GHTG +    +  
Sbjct: 9   PKVLKGHDDHVITCLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67

Query: 118 S------------------------------------ETGNTFVSGSSDKLVNIWDMRTG 141
           +                                          VSGS D  + +WD+ TG
Sbjct: 68  NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 127

Query: 142 YCVQSFEGHHNLIT-------------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP 188
            C+    GH   +               D +V +WD  T  C+ + +GH           
Sbjct: 128 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH--TNRVYSLQF 185

Query: 189 SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINV 248
            G  V +GS D + R++D+     +           + +    +   +L +G  D T+ +
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ----SLTSGMELKDNILVSGNADSTVKI 241

Query: 249 WDSLKCCRVNHLMGHENRVS-CLQVSPDGTAFSSGSWDTTLR 289
           WD      +  L G     S    +  +     + S D T++
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (192), Expect = 4e-17
 Identities = 51/306 (16%), Positives = 114/306 (37%), Gaps = 33/306 (10%)

Query: 2   IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV 61
            +W  +T     ++      V +              +    +        ++   +   
Sbjct: 40  KVWSAVTGKCLRTLVGHTGGVWSSQM--------RDNIIISGSTDRTLKVWNAETGECIH 91

Query: 62  ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETG 121
             +    +       ++++++GS D T  +WD+E+ Q L    GH   +          G
Sbjct: 92  TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC----VQYDG 147

Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------------TDDKLVNIWDMRTG 168
              VSG+ D +V +WD  T  C+ + +GH N +             + D  + +WD+ TG
Sbjct: 148 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG 207

Query: 169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV 228
            C+ +  GHQS  + +      + + +G+ D+T +++D++  + +   +  +    +   
Sbjct: 208 NCIHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK-HQSAVT 264

Query: 229 DFSVSGRLLFAGYNDYTINVWD-----SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS 283
               +   +    +D T+ +WD      ++        G    V  ++ S      + GS
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 324

Query: 284 WDTTLR 289
            + T  
Sbjct: 325 RNGTEE 330

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (176), Expect = 5e-15
 Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 35/235 (14%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
             +     +T +    +             G  V SG  D  V V+      ++     T
Sbjct: 117 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP----ETETCLHT 172

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           +  HT+ +    F      +++GS D +  +WDVE+   + +  GH      ++L     
Sbjct: 173 LQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----K 226

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN----------------LITDDKLVNIWD 164
            N  VSG++D  V IWD++TG C+Q+ +G +                   +DD  V +WD
Sbjct: 227 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 286

Query: 165 MRTGYCVQSF-----EGHQSDVNSVKFHPSGDAVATGSDDAT----CRLFDLRAD 210
           ++TG  +++       G    V  ++   +    A GS + T      + D   D
Sbjct: 287 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 341

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (163), Expect = 2e-13
 Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 12/205 (5%)

Query: 92  WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH 151
           W     +  +   GH   ++         GN  VSGS D  + +W   TG C+++  GH 
Sbjct: 1   WRRGELKSPKVLKGHDDHVIT---CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 57

Query: 152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK 211
             +   ++ +   +           +      +       +          R+     D 
Sbjct: 58  GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117

Query: 212 EVACYKKDS-------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE 264
            +  +  ++       +   A        GR + +G  D+ + VWD      ++ L GH 
Sbjct: 118 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 177

Query: 265 NRVSCLQVSPDGTAFSSGSWDTTLR 289
           NR     +  DG    SGS DT++R
Sbjct: 178 NR--VYSLQFDGIHVVSGSLDTSIR 200

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (180), Expect = 9e-16
 Identities = 51/287 (17%), Positives = 91/287 (31%), Gaps = 71/287 (24%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGEL------------- 110
            +  + C  +   DQ+I++G  D T  +WD  + +  +   GHTG +             
Sbjct: 14  TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG 71

Query: 111 -----------------------MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF 147
                                   +  L         V+ S D+ + +WDM +   +   
Sbjct: 72  SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLR 131

Query: 148 EGHHN----------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD 191
                                  + D+ + +W+  T   V++  GH+  +          
Sbjct: 132 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRDR 189

Query: 192 AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS 251
            V +GS D T RL+D+     +   +    L      D     + + +G  D  I VWD 
Sbjct: 190 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN----KRIVSGAYDGKIKVWDL 245

Query: 252 LKCCR---------VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           +             +  L+ H  RV    +  D     S S D T+ 
Sbjct: 246 VAALDPRAPAGTLCLRTLVEHSGRVFR--LQFDEFQIVSSSHDDTIL 290

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 3e-11
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 24/154 (15%)

Query: 53  DSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMD 112
           ++S  +     +            D+ +++GS D T  LWD+E    L+   GH     +
Sbjct: 164 NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH----EE 219

Query: 113 LDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQ 172
           L           VSG+ D  + +WD+      ++  G                    C++
Sbjct: 220 LVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL------------------CLR 261

Query: 173 SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
           +   H   V  ++F      + + S D T  ++D
Sbjct: 262 TLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 2e-08
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 20/145 (13%)

Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITD-------------DKLVNIWDMRTGYC 170
            VS S D+ + +W+  T   V++  GH   I               D  + +WD+  G C
Sbjct: 151 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC 210

Query: 171 VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS--- 227
           ++  EGH+  V  ++F      + +G+ D   +++DL A  +         L        
Sbjct: 211 LRVLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 268

Query: 228 --VDFSVSGRLLFAGYNDYTINVWD 250
                      + +  +D TI +WD
Sbjct: 269 RVFRLQFDEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (119), Expect = 7e-08
 Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 18/203 (8%)

Query: 98  QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT-- 155
           Q +      +  +  L           VSG  D  + IWD  T  C +   GH   +   
Sbjct: 6   QRIHCRSETSKGVYCL----QYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61

Query: 156 ---------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206
                          +                     +    +   + T S D +  ++D
Sbjct: 62  QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121

Query: 207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENR 266
           + +  ++   ++  +   A         + + +   D TI VW++  C  V  L GH+  
Sbjct: 122 MASPTDI-TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180

Query: 267 VSCLQVSPDGTAFSSGSWDTTLR 289
           ++C  +        SGS D T+R
Sbjct: 181 IAC--LQYRDRLVVSGSSDNTIR 201

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (177), Expect = 3e-15
 Identities = 45/284 (15%), Positives = 89/284 (31%), Gaps = 20/284 (7%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK-TVATHTSFISCCIFPNSDQQ 79
            V A   +     V +GG    V V+ I+   + S   +       ++I  C        
Sbjct: 53  VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111

Query: 80  ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR 139
           ++ G    T ++WD+ +          +       LA S       S  SD  + +WD+ 
Sbjct: 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171

Query: 140 TGYCVQ--------------SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVK 185
               V+              S +G                             S + S+ 
Sbjct: 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG 231

Query: 186 FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYT 245
           + P+G+ +A G + +   +  +    +   +  +S +    S+ F+  G+   +   D  
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL---SLKFAYCGKWFVSTGKDNL 288

Query: 246 INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           +N W +     +       + V    +S D     +GS D    
Sbjct: 289 LNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIVTGSGDKKAT 331

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (145), Expect = 5e-11
 Identities = 38/267 (14%), Positives = 73/267 (27%), Gaps = 25/267 (9%)

Query: 2   IIWDGLTQTKEHSVTMPAT-----WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA 56
            +WD      +  V+         ++ +C   P G  +  GG  + ++++ +A       
Sbjct: 75  KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK 134

Query: 57  KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLA 116
            + T +    +       +               +   +                   + 
Sbjct: 135 AELTSSAPACYALAISPDSKVCFS----CCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190

Query: 117 PSETGNTFVSGSSDKLVNIWDMRTGYCVQ-------------SFEGHHNLITDDKLVNIW 163
            S  G    +G  D  V  WD+R G  +Q                G    +  +      
Sbjct: 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV 250

Query: 164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223
                        H+S V S+KF   G    +   D     +       +   K+ S   
Sbjct: 251 LHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS--- 307

Query: 224 GATSVDFSVSGRLLFAGYNDYTINVWD 250
              S D SV  + +  G  D    V++
Sbjct: 308 SVLSCDISVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 3e-09
 Identities = 20/105 (19%), Positives = 29/105 (27%), Gaps = 28/105 (26%)

Query: 103 FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNI 162
           +  H  E   L L  +  G  FVS   D L+N W    G  +                  
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--------------- 303

Query: 163 WDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL 207
                           S V S         + TGS D    ++++
Sbjct: 304 -------------KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 34/255 (13%), Positives = 62/255 (24%), Gaps = 23/255 (9%)

Query: 54  SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----LLQSFHGHTG 108
             A++     H   +      N  + + TG       +WD+                   
Sbjct: 40  RHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDN 98

Query: 109 ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG 168
            +    L P   G T + G     ++IWD+         E   +      L    D +  
Sbjct: 99  YIRSCKLLPD--GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVC 156

Query: 169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC--------------RLFDLRADKEVA 214
           +   S           +         T                             +E  
Sbjct: 157 FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR 216

Query: 215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP 274
             ++        S+ +  +G    A   + +      +       L  HE+ V  L+ + 
Sbjct: 217 QLQQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY 275

Query: 275 DGTAFSSGSWDTTLR 289
            G  F S   D  L 
Sbjct: 276 CGKWFVSTGKDNLLN 290

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 3e-07
 Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
            +    + +  ++ + +  + V++  +A  G    S G DN +  +              
Sbjct: 247 NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW-----RTPYGASIF 301

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDV 94
            +  +S +  C     D+ I+TGSGD    +++V
Sbjct: 302 QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.9 bits (169), Expect = 4e-14
 Identities = 34/310 (10%), Positives = 79/310 (25%), Gaps = 40/310 (12%)

Query: 18  PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD 77
           P  ++      PS S++     D  +TVY        +        +   + CC F ++ 
Sbjct: 10  PKDYISDIKIIPSKSLLLITSWDGSLTVYKFD-IQAKNVDLLQSLRYKHPLLCCNFIDNT 68

Query: 78  QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137
              +         L              +    + +        +  ++ S D L+ + D
Sbjct: 69  DLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128

Query: 138 MRTGYCVQSFEGHHNLI---------------------TDDKLVNIWDMRTGYCVQSFEG 176
            R          + N                        ++  V  + +           
Sbjct: 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIE 188

Query: 177 HQS----DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL---------- 222
                    +        +  A  S D    +       +     K              
Sbjct: 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248

Query: 223 ---FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF 279
              +   S++FS   + L+   +D  I+ W+     ++ +     N  S ++++      
Sbjct: 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNIL 307

Query: 280 SSGSWDTTLR 289
              + D T +
Sbjct: 308 CLATSDDTFK 317

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.1 bits (128), Expect = 7e-09
 Identities = 21/206 (10%), Positives = 56/206 (27%), Gaps = 21/206 (10%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDL--DLAPSETG 121
                       +  +++ G  +     + +   +        +G    +       +  
Sbjct: 147 TKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ 206

Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDV 181
             +   S D  V +          +                +  R              V
Sbjct: 207 EGYACSSIDGRVAVEFFDDQGDDYN------------SSKRFAFRCHRLNLKDTNLAYPV 254

Query: 182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY 241
           NS++F P    + T   D     ++L+  K++  + K +     + V  + S  +L    
Sbjct: 255 NSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN---EDSVVKIACSDNILCLAT 311

Query: 242 NDYTINVWDSLKCCRVNHLMGHENRV 267
           +D T     ++       +  + + +
Sbjct: 312 SDDTFKTNAAIDQT----IELNASSI 333

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 2/102 (1%)

Query: 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA-TSV 228
            VQ  +  +  ++ +K  PS   +   S D +  ++      +     +           
Sbjct: 3   IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62

Query: 229 DFS-VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSC 269
           +F   +   ++ G     I   D +       L  +E  +  
Sbjct: 63  NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGI 104

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 6/28 (21%), Positives = 14/28 (50%)

Query: 262 GHENRVSCLQVSPDGTAFSSGSWDTTLR 289
             ++ +S +++ P  +     SWD +L 
Sbjct: 9   APKDYISDIKIIPSKSLLLITSWDGSLT 36

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.0 bits (159), Expect = 8e-13
 Identities = 30/268 (11%), Positives = 77/268 (28%), Gaps = 9/268 (3%)

Query: 22  VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL 81
           +   A+    + +A    +++V +Y      +   +   +  H   ++   +     +I+
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYE--KSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67

Query: 82  TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG 141
           T   D    +W ++      +            +  +     F  GS  ++++I      
Sbjct: 68  TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127

Query: 142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT 201
                 +     I    L   W   +           S     +   +           T
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLA-----AGSCDFKCRIFSAYIKEVEERPAPT 182

Query: 202 CRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM 261
                +   +    ++  S       V FS +G  +    +D T+ + D+ K   V  L 
Sbjct: 183 PWGSKMPFGEL--MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240

Query: 262 GHENRVSCLQVSPDGTAFSSGSWDTTLR 289
                +  +    + +  ++G     + 
Sbjct: 241 SETLPLLAVTFITESSLVAAGHDCFPVL 268

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.2 bits (136), Expect = 6e-10
 Identities = 41/327 (12%), Positives = 80/327 (24%), Gaps = 45/327 (13%)

Query: 3   IWDGLTQTKEHSVTMPA--TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           I++           +      V    +AP  + + + G D    V+ +            
Sbjct: 33  IYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL 92

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
                +             + +GS   +   ++ E+   +            L L     
Sbjct: 93  RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 152

Query: 121 GNTFVSGSSDKLVNIWDMRTG------------------YCVQSFEGHHNLITD------ 156
                +GS D    I+                         +         +        
Sbjct: 153 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN 212

Query: 157 ---------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRL-FD 206
                    D  V + D      V +       + +V F      VA G D       +D
Sbjct: 213 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYD 272

Query: 207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENR 266
             A K     + D       S    ++ R  F   +    +   +     ++    H+N 
Sbjct: 273 SAAGKLSFGGRLDV---PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS--LHKNS 327

Query: 267 VSCLQVSPDG----TAFSSGSWDTTLR 289
           VS + V   G    + F +   D  + 
Sbjct: 328 VSQISVLSGGKAKCSQFCTTGMDGGMS 354

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.6 bits (119), Expect = 8e-08
 Identities = 10/87 (11%), Positives = 27/87 (31%)

Query: 177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL 236
               ++   ++     +A   ++    +++   +K V  ++        T VD++     
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65

Query: 237 LFAGYNDYTINVWDSLKCCRVNHLMGH 263
           +     D    VW          L+  
Sbjct: 66  IVTCGTDRNAYVWTLKGRTWKPTLVIL 92

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.1 bits (115), Expect = 3e-07
 Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 21/172 (12%)

Query: 60  TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE 119
             ++   ++    F  +  ++   S D T  L D +    + +    T  L+ +      
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITE- 254

Query: 120 TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--------ITDDKLVNIWDMRTGYCV 171
             ++ V+   D    ++   +     SF G  ++        +T  +     D +     
Sbjct: 255 --SSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG 312

Query: 172 QSFEG------HQSDVNSVKFHPSGDA----VATGSDDATCRLFDLRADKEV 213
            +  G      H++ V+ +     G A      T   D    ++D+R+ +  
Sbjct: 313 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 364

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 19/143 (13%), Positives = 46/143 (32%), Gaps = 8/143 (5%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           + + D   +    ++      ++A  +    S+VA+G  D    ++      DS+A K +
Sbjct: 225 VCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTY----DSAAGKLS 279

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
                             +    + D   +     ++        H   +  + +     
Sbjct: 280 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGK 338

Query: 121 GN--TFVSGSSDKLVNIWDMRTG 141
                F +   D  ++IWD+R+ 
Sbjct: 339 AKCSQFCTTGMDGGMSIWDVRSL 361

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 65.3 bits (157), Expect = 1e-12
 Identities = 24/303 (7%), Positives = 64/303 (21%), Gaps = 41/303 (13%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
            +          V    G      +    + D  + K +    +   +       + +  
Sbjct: 44  RIRYVRRGGDTKVAFIHGTREGDFLG---IYDYRTGKAEKFEENLGNVFAMGVDRNGKFA 100

Query: 81  LTGSGDCTCALWDVESSQLLQSFHGHTGELMDL--------DLAPSETGNTFVSGSSDKL 132
           +  +        D+E+ +           + D                 +    G   + 
Sbjct: 101 VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160

Query: 133 VNIWDMRTGYCVQSFEGHHN--------------LITDDKLVNIWDMRTGYC-------V 171
           ++++DM       +   + +               ++   L    D              
Sbjct: 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKP 220

Query: 172 QSFEGHQSDVNSVKFHPSGDAVATGSDDAT-----CRLFDLRADKEVACYKKDSILFGAT 226
                     N  K  P       G  D           ++           +S +   +
Sbjct: 221 FVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYS 280

Query: 227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 286
                              +  +D         +   +N ++ L++S D         D 
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDG 336

Query: 287 TLR 289
            + 
Sbjct: 337 KIY 339

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 53.7 bits (127), Expect = 8e-09
 Identities = 17/188 (9%), Positives = 36/188 (19%), Gaps = 21/188 (11%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
             S      F    + +   S        D     +L        +   + L P     T
Sbjct: 177 ENSHDYAPAFDADSKNLYYLSYRSLDPSPDR---VVLNFSFEVVSKPFVIPLIPGSPNPT 233

Query: 124 FVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNS 183
            +   S                        +         D      +   E      + 
Sbjct: 234 KLVPRSMTSEAGEYDLND------------MYKRSSPINVDPGDYRMIIPLESSILIYSV 281

Query: 184 VKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND 243
                         +      +D++  K         +    T +  S   + +    +D
Sbjct: 282 PVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE------VKNNLTDLRLSADRKTVMVRKDD 335

Query: 244 YTINVWDS 251
             I  +  
Sbjct: 336 GKIYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 51.4 bits (121), Expect = 5e-08
 Identities = 19/224 (8%), Positives = 50/224 (22%), Gaps = 39/224 (17%)

Query: 4   WDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS---SAKKKT 60
              +   K  + T   +   A A+      +      +        + + S    +K   
Sbjct: 163 VYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFV 222

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCT-----CALWDVESSQLLQSFHGHTGELMDLDL 115
           +       +             G  D        +  +V+           +  L+    
Sbjct: 223 IPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP 282

Query: 116 APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175
              E    +       ++  +D++T                                   
Sbjct: 283 VHGEFAAYYQGAPEKGVLLKYDVKTR-------------------------------KVT 311

Query: 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD 219
             ++++  ++       V    DD     F L   ++    + D
Sbjct: 312 EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETD 355

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 41.8 bits (96), Expect = 8e-05
 Identities = 27/242 (11%), Positives = 57/242 (23%), Gaps = 31/242 (12%)

Query: 74  PNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLV 133
           P     I   S      + DV  + +L+        +  +                   +
Sbjct: 12  PLDGDLIAFVSRG-QAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFL 68

Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIW--------------DMRTGYCVQSFEGHQS 179
            I+D RTG   +  E   N+       N                D+ TG         ++
Sbjct: 69  GIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 128

Query: 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV------- 232
            +       +   +A G                     +   +F AT+ +          
Sbjct: 129 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDA 188

Query: 233 SGRLLFAGYNDYTINVWDSL-------KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
             + L+           D +          +   +       +  ++ P      +G +D
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 248

Query: 286 TT 287
             
Sbjct: 249 LN 250

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 38.3 bits (87), Expect = 8e-04
 Identities = 7/108 (6%), Positives = 24/108 (22%), Gaps = 8/108 (7%)

Query: 4   WDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT 63
            D         +           +    +          +  Y          K + V  
Sbjct: 261 VDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY--------DVKTRKVTE 312

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM 111
             + ++        + ++    D     + +E  +  ++       L+
Sbjct: 313 VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.5 bits (142), Expect = 1e-10
 Identities = 43/304 (14%), Positives = 82/304 (26%), Gaps = 52/304 (17%)

Query: 28  APSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT--------HTSFISCCIFPNSDQQ 79
           +   S   S   D  + V+   L D+ + K K+ +         H   +        +  
Sbjct: 21  SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80

Query: 80  IL-TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE-------------TGNTFV 125
           ++ T S       + +      +       +L+D D+                   +  V
Sbjct: 81  LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 140

Query: 126 SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVK 185
           +        IW         +    +             +     V+S         SV 
Sbjct: 141 ATDVKGTTYIWKFHPFADESNSLTLNW---------SPTLELQGTVESPMTPSQFATSVD 191

Query: 186 FHPSGDAVATGSDDATCRLFDLRADKEVACY----KKDSILFGATSVDFSVSGRLLFAGY 241
               G  +ATG ++ T ++ +L   + +  +       +      SV FS  G LL   +
Sbjct: 192 ISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250

Query: 242 NDYTINVW----------------DSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285
           +  +                     +           H + V  L  +  G    S  WD
Sbjct: 251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 310

Query: 286 TTLR 289
             LR
Sbjct: 311 GKLR 314

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (138), Expect = 4e-10
 Identities = 32/260 (12%), Positives = 72/260 (27%), Gaps = 58/260 (22%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESS------QLLQSFHGHTGELMDLDLAP 117
           H + I        +   ++ SGD    +WD +            S   H   L  +D+  
Sbjct: 13  HDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ 70

Query: 118 -----SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQ 172
                +       + S    +  + +      +        + D  +             
Sbjct: 71  AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM------------- 117

Query: 173 SFEGHQSDVNSVKFHPSGDA-----VATGSDDATCRLFDLRADKEVACYKKDSILFG--- 224
                +    ++K+  S D      +       T  ++      + +     +       
Sbjct: 118 ----KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 173

Query: 225 -------------ATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM------GHEN 265
                        ATSVD S  G L+  G+N+ T+ + +      + +         + N
Sbjct: 174 QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 232

Query: 266 RVSCLQVSPDGTAFSSGSWD 285
            +  ++ SP G+  +     
Sbjct: 233 SIRSVKFSPQGSLLAIAHDS 252

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.6 bits (119), Expect = 1e-07
 Identities = 29/218 (13%), Positives = 69/218 (31%), Gaps = 21/218 (9%)

Query: 8   TQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYA--IALEDDSSAKKKTVATHT 65
            Q    S   P+ +  +   +  G ++A+G  +  V +          +   + ++  ++
Sbjct: 173 LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 231

Query: 66  SFISCCIFPNSDQQILTGSGD---CTCALWDVESSQLLQSFHGHTGELMDL--------- 113
           + I    F      +             L++ E  + + S    T               
Sbjct: 232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291

Query: 114 --DLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC- 170
              L+ +++G T  S   D  +  WD++T   + +   H + I  ++ +   D       
Sbjct: 292 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 351

Query: 171 ---VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF 205
              V   +  +    S       +++     D + R F
Sbjct: 352 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.1 bits (115), Expect = 3e-07
 Identities = 30/250 (12%), Positives = 67/250 (26%), Gaps = 23/250 (9%)

Query: 34  VASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93
                 ++       +   +     ++  T + F +     +    I TG  + T  + +
Sbjct: 153 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI-SERGLIATGFNNGTVQISE 211

Query: 94  VESSQLLQSFHGHTGELMDLDL----APSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG 149
           + + + L +F      + + +       S  G+               +      +    
Sbjct: 212 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS 271

Query: 150 HHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA 209
                            +         H S V S+ F+ SG+ + +   D   R +D++ 
Sbjct: 272 LS-----------VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320

Query: 210 DKEVACYK--KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV 267
            + +       D I      +     G  L         +V    K  R          +
Sbjct: 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEP---GVFDVKFLKKGWRSGMGADLNESL 377

Query: 268 SCLQVSPDGT 277
            C  V  D +
Sbjct: 378 CC--VCLDRS 385

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.9 bits (112), Expect = 6e-07
 Identities = 27/247 (10%), Positives = 62/247 (25%), Gaps = 50/247 (20%)

Query: 101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV 160
            +   H  ++  +        +  VS S D  + +WD +        +  ++       +
Sbjct: 8   NAGKAHDADIFSVSA----CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63

Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS 220
           +  D                    +       VAT S       + +  + E      + 
Sbjct: 64  HHVD--------------VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK 109

Query: 221 ILF--------GATSVDFSVSG-----RLLFAGYNDYTINVWD----------------- 250
           +             ++ +  S        L A     T  +W                  
Sbjct: 110 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP 169

Query: 251 -SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKP 309
                  V   M      + + +S  G   ++G  + T++  E       Y   S+ +  
Sbjct: 170 TLELQGTVESPMTPSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMI 228

Query: 310 TQGLTVY 316
               ++ 
Sbjct: 229 NNSNSIR 235

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.5 bits (98), Expect = 4e-05
 Identities = 9/118 (7%), Positives = 29/118 (24%), Gaps = 13/118 (11%)

Query: 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK----------- 218
              + + H +D+ SV          + S D   +++D +         K           
Sbjct: 6   TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63

Query: 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG 276
             +         +    L+        +  +   +      ++  +  +    +    
Sbjct: 64  HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS 121

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 59.4 bits (142), Expect = 1e-10
 Identities = 28/303 (9%), Positives = 69/303 (22%), Gaps = 24/303 (7%)

Query: 3   IWDGLTQTKEHSVTMP-ATWVMACAYAPSGS-VVASGGLDNKVTVYAIAL--EDDSSAKK 58
           + D  + T   S  MP          AP              +    +        +   
Sbjct: 22  VVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 81

Query: 59  KTVATHTSFISCCIFPNSDQQILTGSGD------------CTCALWDVESSQLLQSFHGH 106
                    +         +++                      ++        +     
Sbjct: 82  SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 141

Query: 107 TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR 166
                   +  ++ G+ +V+G     +++   +    +     +    +   ++  W  +
Sbjct: 142 PMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQ 201

Query: 167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT 226
           +     S           +F       AT          DL+  K       D      T
Sbjct: 202 SPRHEFSMLYTI-----ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFT 256

Query: 227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT 286
            +        ++   N   +  +D LK  ++      ++   C+     G     G    
Sbjct: 257 GLRSPKDPNQIYGVLN--RLAKYD-LKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFN 313

Query: 287 TLR 289
            L 
Sbjct: 314 DLA 316

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 48.2 bits (113), Expect = 5e-07
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 16/127 (12%)

Query: 103 FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN---------- 152
              H   ++       +      +          D++TG                     
Sbjct: 202 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSP 261

Query: 153 -----LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDL 207
                +      +  +D++    +++          V F   GD +  G       +F+ 
Sbjct: 262 KDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 320

Query: 208 RADKEVA 214
              ++V 
Sbjct: 321 DTLEKVK 327

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 45.1 bits (105), Expect = 5e-06
 Identities = 17/179 (9%), Positives = 42/179 (23%), Gaps = 11/179 (6%)

Query: 73  FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT-FVSGSSDK 131
                + ++  +      + DV S  + +S               +    T +V  +   
Sbjct: 4   LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF-GPGTAMMAPDNRTAYVLNNHYG 62

Query: 132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD 191
            +   D+ T                       ++       +      +V +        
Sbjct: 63  DIYGIDLDTCKNTFHANLSS---------VPGEVGRSMYSFAISPDGKEVYATVNPTQRL 113

Query: 192 AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 250
                       +F      E    +   +      +  +  G L  AG + Y ++V  
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKT 172

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 44.7 bits (104), Expect = 7e-06
 Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 9/131 (6%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
                 +       A+  L        +          +  A  T      +    D   
Sbjct: 210 LYTIARFKDDKQDPATADLLYGYLSVDLK---TGKTHTQEFADLTELYFTGLRSPKDPNQ 266

Query: 81  LTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR 139
           + G  +   A +D++  +L+++    HT       +A  + G+    G +   + +++  
Sbjct: 267 IYGVLN-RLAKYDLKQRKLIKAANLDHTYY----CVAFDKKGDKLYLGGTFNDLAVFNPD 321

Query: 140 TGYCVQSFEGH 150
           T   V++ +  
Sbjct: 322 TLEKVKNIKLP 332

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 14/121 (11%), Positives = 30/121 (24%), Gaps = 8/121 (6%)

Query: 184 VKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF-AGYN 242
                  + +   +      + D+ +D            FG  +   +   R  +    +
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNH 60

Query: 243 DYTINVWDSLKCCRVNHLM------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296
              I   D   C    H             +    +SPDG    +    T   ++    +
Sbjct: 61  YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120

Query: 297 Y 297
            
Sbjct: 121 P 121

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 59.0 bits (141), Expect = 2e-10
 Identities = 27/294 (9%), Positives = 62/294 (21%), Gaps = 11/294 (3%)

Query: 3   IWDGLTQTKEHSVTMPAT--WVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKK 59
           + D      +  +T+       M    AP G    A+      +    +   +       
Sbjct: 15  VIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74

Query: 60  TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE 119
           +              + D + L                Q  +        L       + 
Sbjct: 75  STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP 134

Query: 120 TGNTFVSGSSDK----LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175
              T ++ + D      +            +      + + +              Q   
Sbjct: 135 RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194

Query: 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR 235
                          D     +        DL   +      ++  +        +V+  
Sbjct: 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM---REVRIMDVFYFSTAVNPA 251

Query: 236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
              A      +  +D L+       +   +    + VS DG+    G     L 
Sbjct: 252 KTRAFGAYNVLESFD-LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLA 304

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 53.3 bits (126), Expect = 1e-08
 Identities = 12/174 (6%), Positives = 35/174 (20%), Gaps = 15/174 (8%)

Query: 55  SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLD 114
           +     +      +                       +       + + H  +G +    
Sbjct: 143 ARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF 202

Query: 115 LAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN--------------LITDDKLV 160
               +  +     +    +   D+ TG          +                    ++
Sbjct: 203 YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVL 262

Query: 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA 214
             +D+     ++          SV     G  V  G        +D    ++  
Sbjct: 263 ESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 49.4 bits (116), Expect = 2e-07
 Identities = 17/207 (8%), Positives = 50/207 (24%), Gaps = 17/207 (8%)

Query: 80  ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT-FVSGSSDKLVNIWDM 138
           IL  +      + D E   + +           +    +  G   + + +  + +   D+
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD 198
            TG  +   +               +        +       +   +     +       
Sbjct: 64  VTGETLGRIDLSTP----------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113

Query: 199 DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN 258
                L+D         ++        T + ++  G  L+    D  +   ++       
Sbjct: 114 PTRVALYDAETLSRRKAFEAPR---QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED- 169

Query: 259 HLMGHENRVSCLQVSPDGTAFSSGSWD 285
                ++  +     PD  A  +    
Sbjct: 170 --KPIQSWEAETYAQPDVLAVWNQHES 194

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 11/137 (8%), Positives = 29/137 (21%), Gaps = 10/137 (7%)

Query: 17  MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS 76
                                     +        D  + +          +       +
Sbjct: 195 SGVMATPFYTARKDIDPADPTAYRTGLLTM-----DLETGEMAMREVRIMDVFYFSTAVN 249

Query: 77  DQQILTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGNTFVSGSSDKLVNI 135
             +            +D+E +  ++     H+       +  S  G+T   G +   +  
Sbjct: 250 PAKTRAFGAYNVLESFDLEKNASIKRVPLPHSY----YSVNVSTDGSTVWLGGALGDLAA 305

Query: 136 WDMRTGYCVQSFEGHHN 152
           +D  T       +   N
Sbjct: 306 YDAETLEKKGQVDLPGN 322

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 6e-04
 Identities = 11/113 (9%), Positives = 26/113 (23%), Gaps = 6/113 (5%)

Query: 191 DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF-AGYNDYTINVW 249
           D +   +      + D                        +  GR+ +       ++   
Sbjct: 2   DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61

Query: 250 DS-----LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRY 297
           D      L    ++        +    +SPDG   +       L     + + 
Sbjct: 62  DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.8 bits (140), Expect = 2e-10
 Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 12/234 (5%)

Query: 57  KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLA 116
           ++ T+  H + +  C+    D  ++TG+ D    ++D  + + L    GH G +  L  A
Sbjct: 4   QRTTLRGHMTSVITCLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA 62

Query: 117 PSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG 176
               G   VSGS+D+ V +WD++ G C   FEGH++                Y    +  
Sbjct: 63  H---GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS-------TVRCLDIVEYKNIKYIV 112

Query: 177 HQSDVNSVK-FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR 235
             S  N++  +    ++      +           +E   +        A+    S  G 
Sbjct: 113 TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN 172

Query: 236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           ++ +G  D T+ VWD  +   +  L GH +R+       +     S S DTT+R
Sbjct: 173 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR 226

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (116), Expect = 2e-07
 Identities = 55/265 (20%), Positives = 95/265 (35%), Gaps = 14/265 (5%)

Query: 20  TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ 79
           T V+ C      + V +G  D  + VY       +      ++ H   +    + +    
Sbjct: 13  TSVITCL-QFEDNYVITGADDKMIRVYDS----INKKFLLQLSGHDGGVWALKYAH-GGI 66

Query: 80  ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR 139
           +++GS D T  +WD++       F GH   +  LD+   +     V+GS D  +++W + 
Sbjct: 67  LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 126

Query: 140 TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD 199
               V      H+      LV        Y V    GH + V        G+ V +GS D
Sbjct: 127 KESSVPDHGEEHD----YPLVFHTPEENPYFVGVLRGHMASVR--TVSGHGNIVVSGSYD 180

Query: 200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH 259
            T  ++D+   K    Y          S  +    +   +   D TI +WD      +  
Sbjct: 181 NTLIVWDVAQMKC--LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 238

Query: 260 LMGHENRVSCLQVSPDGTAFSSGSW 284
           L GH   V  L++S      ++   
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADG 263

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.7 bits (114), Expect = 4e-07
 Identities = 40/319 (12%), Positives = 84/319 (26%), Gaps = 37/319 (11%)

Query: 2   IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV 61
            ++D + +     ++     V A  YA  G +V+                          
Sbjct: 36  RVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIK---KGCCTHVFEG 92

Query: 62  ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET- 120
              T      +   + + I+TGS D T  +W +     +          +          
Sbjct: 93  HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 152

Query: 121 ------------------GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNI 162
                             GN  VSGS D  + +WD+    C+    GH + I      + 
Sbjct: 153 FVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 212

Query: 163 WDM----------RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE 212
                        R          +    ++        +       A           +
Sbjct: 213 RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAND 272

Query: 213 VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD--SLKCCRVNHLMGHENRVSCL 270
            +          +    F VS  +L +G ++   N+++  S K    N ++   +++  +
Sbjct: 273 YSRKFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHAN-ILKDADQIWSV 330

Query: 271 QVSPDGTAFSSGSWDTTLR 289
                    ++   D    
Sbjct: 331 NFKGKTL-VAAVEKDGQSF 348

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.2 bits (97), Expect = 5e-05
 Identities = 7/75 (9%), Positives = 23/75 (30%), Gaps = 4/75 (5%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS-FHGHTGELMDLDLAPSETGN 122
           H + +S          IL    +    ++++ S +L+ +       ++  ++        
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG---KT 336

Query: 123 TFVSGSSDKLVNIWD 137
              +   D    +  
Sbjct: 337 LVAAVEKDGQSFLEI 351

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 6e-04
 Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 27/87 (31%)

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
            +  +   S+   NI+++R+G  V +                                  
Sbjct: 293 SDNILVSGSENQFNIYNLRSGKLVHAN--------------------------ILKDADQ 326

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDL 207
           + SV F      VA    D    L  L
Sbjct: 327 IWSVNFKGKT-LVAAVEKDGQSFLEIL 352

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 57.9 bits (139), Expect = 5e-10
 Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 16/146 (10%)

Query: 156 DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK--EV 213
           D   + + D  T       +     V+  +   SG  +     D    + DL   +   V
Sbjct: 40  DAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV 98

Query: 214 ACYKKDSILFG-ATSVDFSVSGRLLFA-GYNDYTINVWD--SLKCCRVNHLM-------- 261
           A  K  S      TS       +   A  Y      + D  +L+  ++            
Sbjct: 99  AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE 158

Query: 262 -GHENRVSCLQVSPDGTAFSSGSWDT 286
              E RV+ +  S     F     +T
Sbjct: 159 YHPEPRVAAILASHYRPEFIVNVKET 184

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 27/241 (11%), Positives = 51/241 (21%), Gaps = 37/241 (15%)

Query: 82  TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG 141
           T       AL D  + ++           +      S +G        D  VN+ D+   
Sbjct: 37  TLRDAGQIALIDGSTYEIKTVLDTGYAVHI---SRLSASGRYLFVIGRDGKVNMIDLWMK 93

Query: 142 -----YCVQSFEGHHNLIT----------------DDKLVNIWDMRTGYCVQSFEGHQSD 180
                  ++      ++ T                      I D  T    +        
Sbjct: 94  EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153

Query: 181 VNSVKFHPSGD------------AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV 228
            +  ++HP                +    +     L D   D       + S        
Sbjct: 154 YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD-YTDLNNLKTTEISAERFLHDG 212

Query: 229 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL 288
               S R      N     V    K  ++  +     +        +    + G    T 
Sbjct: 213 GLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATS 272

Query: 289 R 289
            
Sbjct: 273 H 273

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.0 bits (125), Expect = 1e-08
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN- 122
                   +     Q+  T   D T  +WDV +S+ +Q +     +L +  +    TGN 
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 309

Query: 123 TFVSGSSDKLVNIWDM 138
             +S S D  +N +++
Sbjct: 310 RIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.8 bits (109), Expect = 2e-06
 Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 26/88 (29%)

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
              F +  +D  + +WD+ T  CVQ +                              Q  
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLD-------------------------KQQLG 297

Query: 181 VNSVKFHPSGDA-VATGSDDATCRLFDL 207
              V    +G+  + + S D T   ++L
Sbjct: 298 NQQVGVVATGNGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.0 bits (99), Expect = 2e-05
 Identities = 18/116 (15%), Positives = 33/116 (28%), Gaps = 1/116 (0%)

Query: 136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT 195
            D+        F             +         ++  +                  AT
Sbjct: 209 RDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFAT 268

Query: 196 GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG-RLLFAGYNDYTINVWD 250
              DAT R++D+   K V  +  D    G   V    +G   + +   D T+N ++
Sbjct: 269 VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (87), Expect = 7e-04
 Identities = 23/221 (10%), Positives = 55/221 (24%), Gaps = 27/221 (12%)

Query: 62  ATHTSFISCCIFPNSDQQILTGSGDCTC-ALWDVESSQL--LQSFHGH-TGELMDLDLAP 117
           +T  +F +   +  +   I    G        D   S++  +  F GH +  +  +  +P
Sbjct: 14  STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73

Query: 118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH 177
            +      SG     V +W                           +         F+  
Sbjct: 74  IKGSQYLCSGDESGKVIVWGWTFDKE-------------------SNSVEVNVKSEFQVL 114

Query: 178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL 237
              ++ + +   G  +    +        +  D   +  +         +     S  + 
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174

Query: 238 FAGYNDYTINVWDSLKCCR----VNHLMGHENRVSCLQVSP 274
                D    V+      +            + V  ++ SP
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP 215

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 50.6 bits (119), Expect = 9e-08
 Identities = 21/216 (9%), Positives = 56/216 (25%), Gaps = 11/216 (5%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
           + + D   +  +  + +P  + +      +  +    G   KV        + +  +   
Sbjct: 131 VGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 190

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
                             +++  +        D+ S               +        
Sbjct: 191 PEDEFLINHPAYSQK-AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           G   V+           +      +            + V + D +TG  +  FE    +
Sbjct: 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTA-------SRFVVVLDAKTGERLAKFEMG-HE 301

Query: 181 VNSVKFHPSGD--AVATGSDDATCRLFDLRADKEVA 214
           ++S+           A  + D T  + D  + +E+ 
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 337

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 47.5 bits (111), Expect = 1e-06
 Identities = 24/261 (9%), Positives = 52/261 (19%), Gaps = 46/261 (17%)

Query: 75  NSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM-------DLDLAPSETGNTFVSG 127
               +I  G       ++D  +                         L P      F   
Sbjct: 66  TVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF 125

Query: 128 SSDKLVNIWDMRTGYCVQSFEGHHNLIT-------------DDKLVNIWDMRTGYCVQ-- 172
           S    V + D+      +  +                    D  L  +     G      
Sbjct: 126 SPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH 185

Query: 173 ---SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD 229
                   +  +N   +      +   +        DL +         +++     +  
Sbjct: 186 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 245

Query: 230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-------------------HENRVSCL 270
           +   G    A +           +     H                        + +  +
Sbjct: 246 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSI 305

Query: 271 QVSPDGT--AFSSGSWDTTLR 289
            VS D     ++  + D TL 
Sbjct: 306 NVSQDEKPLLYALSTGDKTLY 326

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 1/90 (1%)

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSET 120
           VA H +     +  +   +    +      + D ++ + L  F     E+  ++++  E 
Sbjct: 254 VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEK 312

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGH 150
              +   + DK + I D  +G  ++S    
Sbjct: 313 PLLYALSTGDKTLYIHDAESGEELRSVNQL 342

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 50.0 bits (117), Expect = 1e-07
 Identities = 32/283 (11%), Positives = 67/283 (23%), Gaps = 17/283 (6%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
            + A + +  G  + S   +  +  + I       + +     H + I+     +     
Sbjct: 14  AITALSSSADGKTLFSADAEGHINSWDI---STGISNRVFPDVHATMITGIKTTSKGDLF 70

Query: 81  LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT 140
                D    +    S         +      L LA S  G+  V+     +      + 
Sbjct: 71  TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 130

Query: 141 GYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDA-------- 192
                S+      +++DK       +            S           +         
Sbjct: 131 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN 190

Query: 193 ----VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINV 248
               VAT               +                V +S     L  G  D ++ V
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250

Query: 249 WD--SLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           W+        +     H        +  + T   S   D+ ++
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.8 bits (114), Expect = 3e-07
 Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 1/106 (0%)

Query: 168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS 227
           G   Q   GH   + ++     G  + +   +     +D+        +         T 
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH-ATMITG 60

Query: 228 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVS 273
           +  +  G L    ++D+   V         +  + ++     L ++
Sbjct: 61  IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.4 bits (113), Expect = 3e-07
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 98  QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152
            + Q  +GH   +  L  +    G T  S  ++  +N WD+ TG   + F   H 
Sbjct: 3   SIDQVRYGHNKAITALSSSAD--GKTLFSADAEGHINSWDISTGISNRVFPDVHA 55

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.2 bits (102), Expect = 1e-05
 Identities = 26/239 (10%), Positives = 60/239 (25%), Gaps = 13/239 (5%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF-HGHTGELMDLDLAPSETGN 122
           H   I+        + + +   +     WD+ +    + F   H   +  +         
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70

Query: 123 TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVN 182
           T       K+V                  +      +    D+    C +    +     
Sbjct: 71  TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 130

Query: 183 SVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN 242
           +        +    S+D        +  K        + +    ++        +    N
Sbjct: 131 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN 190

Query: 243 DYTINVWDSLKCCRV------------NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
              +   D  +                N    H  +V+C+  SPD    ++GS D ++ 
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 3e-05
 Identities = 13/74 (17%), Positives = 29/74 (39%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT 123
           HT+ ++C  +   + ++ TGS D +  +W++               +  ++        T
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282

Query: 124 FVSGSSDKLVNIWD 137
            VS   D  +  W+
Sbjct: 283 IVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.3 bits (97), Expect = 4e-05
 Identities = 15/115 (13%), Positives = 38/115 (33%)

Query: 136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT 195
                     +F    +        ++ +        S+  H + V  V + P    +AT
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241

Query: 196 GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 250
           GS D +  ++++    +     K +    + +    ++   + +   D  I  W+
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.4 bits (92), Expect = 2e-04
 Identities = 6/76 (7%), Positives = 20/76 (26%), Gaps = 2/76 (2%)

Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG--YCVQSFEGHQSDVNSVKFHPSGD 191
                                + D  V +W+M     + +     H     +     +  
Sbjct: 222 FHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET 281

Query: 192 AVATGSDDATCRLFDL 207
            + +   D+  + +++
Sbjct: 282 TIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.0 bits (91), Expect = 2e-04
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
             + +       +S T     V   +++P    +A+G LDN V V+   +   S      
Sbjct: 206 YSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN--MNKPSDHPIII 263

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDV 94
              H       +   ++  I++   D     W+V
Sbjct: 264 KGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.5 bits (116), Expect = 2e-07
 Identities = 26/270 (9%), Positives = 59/270 (21%), Gaps = 22/270 (8%)

Query: 2   IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD-------- 53
                 + T     T  +        +PSG   ASG +   V ++               
Sbjct: 41  YTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPV 100

Query: 54  ------SSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHT 107
                   +         +               TG+ +          + +        
Sbjct: 101 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPF 160

Query: 108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT 167
             +   D                                          D  + +++   
Sbjct: 161 RIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 220

Query: 168 G-------YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS 220
           G               H   V  + + P G  +A+ S D T +++++   K        +
Sbjct: 221 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT 280

Query: 221 ILFGATSVDFSVSGRLLFAGYNDYTINVWD 250
                  +    + + L +   +  IN  +
Sbjct: 281 R-IEDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.1 bits (115), Expect = 3e-07
 Identities = 34/292 (11%), Positives = 75/292 (25%), Gaps = 29/292 (9%)

Query: 22  VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL 81
            +     P+G  +        V    +     S    +    H+   +      S     
Sbjct: 20  AVVLGNTPAGDKIQYCN-GTSVYTVPV----GSLTDTEIYTEHSHQTTVAKTSPSGYYCA 74

Query: 82  TGSGDCT--CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR 139
           +G              +  L  +    +G + D+           V    ++  +++   
Sbjct: 75  SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD 134

Query: 140 TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNS---------------- 183
           TG    +  G    +           R             +                   
Sbjct: 135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 194

Query: 184 VKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF-----GATSVDFSVSGRLLF 238
           V+++P G   A+   D T  L++     +   ++ DS+           + +S  G  + 
Sbjct: 195 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA 254

Query: 239 AGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDGTAFSSGSWDTTLR 289
           +   D TI +W+         +          L +     A  S S +  + 
Sbjct: 255 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.0 bits (107), Expect = 2e-06
 Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 26/87 (29%)

Query: 121 GNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180
           G    S S+DK + IW++ T    ++                               + +
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVG--------------------------TRIE 283

Query: 181 VNSVKFHPSGDAVATGSDDATCRLFDL 207
              +    +  A+ + S +      + 
Sbjct: 284 DQQLGIIWTKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.7 bits (88), Expect = 5e-04
 Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 4   WDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT 63
             G+ +         +  V    ++P G+ +AS   D  + ++ +A    +   +KT+  
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA----TLKVEKTIPV 278

Query: 64  HTSFIS-CCIFPNSDQQILTGSGDCTCALWDVE 95
            T           + Q +++ S +      + E
Sbjct: 279 GTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 49.6 bits (117), Expect = 2e-07
 Identities = 25/238 (10%), Positives = 46/238 (19%), Gaps = 36/238 (15%)

Query: 84  SGDCTCALWDVESSQLLQSFHGHTGELMDLD------LAPSETGNTFVSGSSDKLVNIWD 137
           +G     +        L    G    L             S +      G     V ++D
Sbjct: 43  AGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFD 102

Query: 138 MRTGYCVQSFEGHHNLIT-----------------------DDKLVNIWDMRTGYCVQSF 174
             T   +   E                                       +      Q  
Sbjct: 103 PVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLT 162

Query: 175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT----SVDF 230
           +             +      GS  A+    DL A    A                +   
Sbjct: 163 KSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQA 219

Query: 231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL 288
           +  G L++A  +        +        + G+E+          G    +   +T  
Sbjct: 220 NYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG 277

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 48.8 bits (115), Expect = 3e-07
 Identities = 19/255 (7%), Positives = 48/255 (18%), Gaps = 48/255 (18%)

Query: 80  ILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT------FVSGSSDKLV 133
              G       ++D  +   +            +       GN                 
Sbjct: 89  SAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148

Query: 134 NIWDMRTGYCVQSFEGHHNLIT-------------DDKLVNIWDMRTGYC-----VQSFE 175
               +      Q  +                       L                 Q   
Sbjct: 149 AGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208

Query: 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR 235
                  + + +  G  V   +        D+ A         D    G  + +F  +G 
Sbjct: 209 AQNCSSQAAQANYPGMLVWAVASSIL--QGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266

Query: 236 LLFAGYNDY-------------------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDG 276
            + A   +                      +        + +  + + +    +  + DG
Sbjct: 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT-ASVGQTSGPISNGHDSDAIIAAQDG 325

Query: 277 T--AFSSGSWDTTLR 289
               +++ +    L 
Sbjct: 326 ASDNYANSAGTEVLD 340

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.1 bits (107), Expect = 2e-06
 Identities = 8/74 (10%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDA 192
                +     +  E      + D  + I+ ++     +++   H+  VN++ +      
Sbjct: 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-T 271

Query: 193 VATGSDDATCRLFD 206
           + +   DA  + ++
Sbjct: 272 LVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.1 bits (107), Expect = 2e-06
 Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 64  HTSFISCCIFPNSDQQILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGN 122
             +          +  + TGS D    ++ V+   +++++ + H   + +L        +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET---PS 270

Query: 123 TFVSGSSDKLVNIWD 137
           T VS  +D  +  W+
Sbjct: 271 TLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.5 bits (95), Expect = 7e-05
 Identities = 31/282 (10%), Positives = 82/282 (29%), Gaps = 27/282 (9%)

Query: 21  WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80
            + A    P    + SG  D ++  ++ +              H++ I       + +  
Sbjct: 15  GITALTVNP----LISGSYDGRIMEWSSS---------SMHQDHSNLIVSLDNSKAQEYS 61

Query: 81  LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT 140
                D        +     Q             +  ++     +   +  ++    + +
Sbjct: 62  SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS 121

Query: 141 GYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE---GHQSDVNSVKFHPSGDAVATGS 197
                S   ++  +  ++   I   +      SF+     ++  + +   PS   +A G 
Sbjct: 122 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 181

Query: 198 DDATCRLFDLRADKEVACYKKDSILF---------GATSVDFSVSGRLLFAGYNDYTINV 248
                 L+DL++ +                        + +  +   L+  G  D  I +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241

Query: 249 WDSLKCCRVNH-LMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289
           +   +  ++   L  H++ V+ L      T   S   D  ++
Sbjct: 242 YSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 282

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
                    +K ++++       A        +VA+G LD  + +Y++          K 
Sbjct: 197 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV---KRPMKIIKA 253

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDV 94
           +  H   ++  ++  +   +++   D     W+V
Sbjct: 254 LNAHKDGVNNLLW-ETPSTLVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (87), Expect = 6e-04
 Identities = 13/117 (11%), Positives = 37/117 (31%), Gaps = 2/117 (1%)

Query: 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV 193
           +  +          +     +   ++           + +     ++  + +     D V
Sbjct: 171 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV 230

Query: 194 ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 250
           ATGS D    ++ ++   ++          G  ++ +     L+ +G  D  I  W+
Sbjct: 231 ATGSLDTNIFIYSVKRPMKIIKALNAH-KDGVNNLLWETPSTLVSSG-ADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.6 bits (85), Expect = 0.001
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 12/180 (6%)

Query: 98  QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD 157
           ++L++  GH   +  L + P       +SGS D  +  W   + +   S        +  
Sbjct: 4   EVLKTISGHNKGITALTVNP------LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKA 57

Query: 158 KLVN--IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC 215
           +  +   WD        +     S       +  G      +DD    L     D   + 
Sbjct: 58  QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV 117

Query: 216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD 275
                     ++V  S +   +     +       S      +       + S + +SP 
Sbjct: 118 RLN----SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 45.3 bits (107), Expect = 6e-06
 Identities = 28/212 (13%), Positives = 54/212 (25%), Gaps = 26/212 (12%)

Query: 1   MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60
             +    T   +    +        A   +G+    G   +KV V         S   + 
Sbjct: 199 RAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD--SKVPVVDGR---GESEFTRY 253

Query: 61  VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL--------QSFHGHT-GELM 111
           +    +       P+    I  G    T ++  ++    L         +        L 
Sbjct: 254 IPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLG 313

Query: 112 DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV 171
            L       GN + +   D  V  W++       + +        + +    D      V
Sbjct: 314 PLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGD------RVNYIRQKLD------V 361

Query: 172 QSFEGHQSDVNSVKFHPSGDAVATGSDDATCR 203
           Q   GH     +      G  +   S  +  R
Sbjct: 362 QYQPGHNHASLTESRDADGKWLVVLSKFSKDR 393

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.3 bits (93), Expect = 2e-04
 Identities = 16/197 (8%), Positives = 47/197 (23%), Gaps = 19/197 (9%)

Query: 112 DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN--------------LITDD 157
                        V+      + + D  +   V+  +  +               +I  D
Sbjct: 23  KQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD 82

Query: 158 KLVNIWDMRTGYC-----VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE 212
             +++ D+          ++     +S  +S            G+              E
Sbjct: 83  ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 142

Query: 213 VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272
                    +   T               +++   + +  +  +V  +   +     +  
Sbjct: 143 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS 202

Query: 273 SPDGTAFSSGSWDTTLR 289
                  + G WD++ R
Sbjct: 203 IGAAPFLADGGWDSSHR 219

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.6 bits (91), Expect = 4e-04
 Identities = 30/282 (10%), Positives = 70/282 (24%), Gaps = 28/282 (9%)

Query: 49  ALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGHT 107
            + +   + K  V             +       T       AL D +S ++++      
Sbjct: 3   GMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY 62

Query: 108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-----VQSFEGHHNLITD------ 156
                     S +G   +    D  +++ D+          ++      ++ +       
Sbjct: 63  A---VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYE 119

Query: 157 ----------DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLF 205
                          I D  T    Q        V++  +HP    A    S +    + 
Sbjct: 120 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 179

Query: 206 DLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN 265
           +++   +V       I     +V    +   L  G  D +   + +         +    
Sbjct: 180 NVKETGKVLLVNYKDI--DNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSK 237

Query: 266 RVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRIT 307
                 +   G     G     +  +        +L    I+
Sbjct: 238 DRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSIS 279

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 35/270 (12%), Positives = 70/270 (25%), Gaps = 28/270 (10%)

Query: 2   IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV 61
            I DG T   +  V+     V    Y P   V A          + + +++  + K   V
Sbjct: 134 AIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKE--TGKVLLV 190

Query: 62  ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETG 121
                         +   +  G  D +   +   ++   +     + +     L      
Sbjct: 191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT 250

Query: 122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITD-DKLVNIWDMRTGYCVQSFEGHQSD 180
                G      N    + G    +       I+                V   +G    
Sbjct: 251 PHPGRG-----ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 305

Query: 181 VNSVKFHPSGDAVA-------TGSDDATCRLFD---LRADKEVACYKKDSILF----GAT 226
              +K HP    +              +  +FD   L A  +V    + + L        
Sbjct: 306 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVV 365

Query: 227 SVDFSVSGR-LLFAGYN----DYTINVWDS 251
             +++  G  + F+ +N       + V D 
Sbjct: 366 QPEYNKRGDEVWFSVWNGKNDSSALVVVDD 395

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 39.1 bits (89), Expect = 4e-04
 Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 4/90 (4%)

Query: 82  TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNT-FVSGSSDKLVNIWDMRT 140
             S     ++ DV S+++  +    +     +    S  G   +V+ +    V+I D  T
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVGSN---PMGAVISPDGTKVYVANAHSNDVSIIDTAT 63

Query: 141 GYCVQSFEGHHNLITDDKLVNIWDMRTGYC 170
              + +     +        +   +     
Sbjct: 64  NNVIATVPAGSSPQGVAVSPDGKQVYVTNM 93

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	320
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.97
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.95
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.95
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.92
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.89
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.88
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.88
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.87
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.84
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.84
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.84
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.8
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.78
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.78
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.76
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.76
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.73
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.59
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.57
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.56
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.48
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.41
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.27
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.2
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.18
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.14
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.14
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.07
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.0
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.0
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.84
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.8
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.7
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.67
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.59
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.48
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.43
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.34
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.26
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.11
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.98
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.93
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.63
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.35
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.29
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.1
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.08
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.04
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.95
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	96.29
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.25
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	95.9
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	95.84
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.77
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.27
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	94.83
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	94.78
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.45
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.28
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	93.03
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	92.44
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	92.32
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	92.17
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.82
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	91.3
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	84.88
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	81.29

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-41  Score=289.05  Aligned_cols=269  Identities=19%  Similarity=0.337  Sum_probs=225.7

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc-cccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS-AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE   95 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~   95 (320)
                      .|...|.+++|+|+|++|++|+ ||.|+|||+....... ........|...|.++.|++++++|++|+.||.|++||+.
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~  127 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence            5788999999999999999997 8999999986433221 1122345788999999999999999999999999999986


Q ss_pred             Cc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCC
Q psy14961         96 SS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDK  158 (320)
Q Consensus        96 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~  158 (320)
                      ..  +....+..|...+..+.++  +++..+++++.|+.+++||+.++++.....+|...+               ..++
T Consensus       128 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~  205 (337)
T d1gxra_         128 APTPRIKAELTSSAPACYALAIS--PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN  205 (337)
T ss_dssp             CC--EEEEEEECSSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            54  4556677788888877774  568899999999999999999988776665544322               3578


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEE
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF  238 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  238 (320)
                      .+++||+++++.+..+. |...|.+++|+|+++.|++++.|+.+++||++.++......+..   .+.+++|+|++++|+
T Consensus       206 ~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~i~~v~~s~~g~~l~  281 (337)
T d1gxra_         206 TVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHES---CVLSLKFAYCGKWFV  281 (337)
T ss_dssp             EEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSS---CEEEEEECTTSSEEE
T ss_pred             cccccccccceeecccc-cccceEEEEEcccccccceecccccccccccccccccccccccc---ccceEEECCCCCEEE
Confidence            99999999998877664 78899999999999999999999999999999887654433322   367899999999999


Q ss_pred             EEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       239 ~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +|+.||.|++||..++..+..+ .|...|.+++|+||+++|++||.|++|++|+.
T Consensus       282 s~s~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         282 STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEeCCCeEEEEECCCCCEEEEc-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            9999999999999988887654 58889999999999999999999999999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-40  Score=282.22  Aligned_cols=282  Identities=24%  Similarity=0.432  Sum_probs=245.4

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL   81 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~   81 (320)
                      +.|...... .+.+..|...|++++|+|++++|++|+.||+|++||+..    .....++..|...|.++.+++++..++
T Consensus         1 k~w~p~~~~-~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~----~~~~~~~~~h~~~V~~~~~~~~~~~~~   75 (317)
T d1vyhc1           1 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET----GDFERTLKGHTDSVQDISFDHSGKLLA   75 (317)
T ss_dssp             CCCCCCSSC-SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT----CCCCEEECCCSSCEEEEEECTTSSEEE
T ss_pred             CccCCCCCc-cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC----CCEEEEEeCCCCcEEEEeeeccccccc
Confidence            357554333 356778999999999999999999999999999999853    234556788999999999999999999


Q ss_pred             EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-------
Q psy14961         82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------  154 (320)
Q Consensus        82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------  154 (320)
                      +++.++.+.+|+.........+..|...+.++.+.  ++++.+++++.|+.+++||+++++.+..+.++...+       
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (317)
T d1vyhc1          76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIM--PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ  153 (317)
T ss_dssp             EEETTSCCCEEETTSSCEEECCCCCSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred             ccccccccccccccccccccccccccccceeeecc--CCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeeccc
Confidence            99999999999998888888888888888877765  467899999999999999999998887776554322       


Q ss_pred             --------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC--------------------CEEEEeeCCCeEEEEE
Q psy14961        155 --------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG--------------------DAVATGSDDATCRLFD  206 (320)
Q Consensus       155 --------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g--------------------~~l~s~s~dg~i~iwd  206 (320)
                              +.|+.+++|+..++.....+.+|...+.+++|+|++                    ..+++++.|+.|++||
T Consensus       154 ~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~  233 (317)
T d1vyhc1         154 DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD  233 (317)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEE
Confidence                    358899999999999999999999999999998753                    4689999999999999


Q ss_pred             CCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961        207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT  286 (320)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~  286 (320)
                      +++++.+..+..+..  .+.++.|+|++++|++|+.||.|++||+.+++++.++.+|.++|++++|+|++++|+|||.|+
T Consensus       234 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg  311 (317)
T d1vyhc1         234 VSTGMCLMTLVGHDN--WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ  311 (317)
T ss_dssp             TTTTEEEEEEECCSS--CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTS
T ss_pred             CCCCcEEEEEeCCCC--CEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence            999988777665433  457899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEeee
Q psy14961        287 TLRDEE  292 (320)
Q Consensus       287 ~ir~~~  292 (320)
                      +|++||
T Consensus       312 ~i~iWd  317 (317)
T d1vyhc1         312 TVKVWE  317 (317)
T ss_dssp             EEEEEC
T ss_pred             eEEEeC
Confidence            999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.4e-40  Score=282.77  Aligned_cols=272  Identities=39%  Similarity=0.711  Sum_probs=228.4

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..|...|++++|+|++++|++|+.||.|++||+..    ......+..|...|.++.|++++.++++|+.|+.+++|+
T Consensus        50 tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~----~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT----TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT----TEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             EECCCCCCEEEEEECCCCCEEEEEECCCceeeeeccc----ceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence            4567999999999999999999999999999999752    234456778999999999999999999999999999999


Q ss_pred             CCCcc----eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc---------------cc
Q psy14961         94 VESSQ----LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN---------------LI  154 (320)
Q Consensus        94 ~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~---------------~~  154 (320)
                      .....    ....+.+|...........   +..+.....+.....++............+..               ..
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (340)
T d1tbga_         126 LKTREGNVRVSRELAGHTGYLSCCRFLD---DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG  202 (340)
T ss_dssp             SSSSCSCCCEEEEECCCSSCEEEEEEEE---TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             ccccccccccceeccccccccccccccc---ccccccccccccccccccccccccccccccceeEeeeccccccceeEEe
Confidence            76542    3445556666555443332   46788888999999998876544332221111               12


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                      ..++.+++||+++++++..+.+|...|.+++|+|++++|++|+.|+.|++||++..+....+........+.+++|+|++
T Consensus       203 ~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  282 (340)
T d1tbga_         203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG  282 (340)
T ss_dssp             ETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSS
T ss_pred             ecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCC
Confidence            46899999999999999999999999999999999999999999999999999988877666555444567889999999


Q ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      .+|++|+.||.|++||..++.++..+.+|.++|++|+|+||+++|+|||.|++|++|+
T Consensus       283 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999999999999999999999999999999999999999999999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-40  Score=292.88  Aligned_cols=291  Identities=26%  Similarity=0.448  Sum_probs=226.5

Q ss_pred             eEeecccce----eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc--------------cccccccc
Q psy14961          2 IIWDGLTQT----KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS--------------AKKKTVAT   63 (320)
Q Consensus         2 ~~W~~~~~~----~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~--------------~~~~~~~~   63 (320)
                      .+|+.....    .++....|...|++++|+|||++|++|+ |+.|++|++.......              ........
T Consensus        41 ~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (388)
T d1erja_          41 ILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS  119 (388)
T ss_dssp             EEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------C
T ss_pred             EEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccC
Confidence            367765433    2233345889999999999999999987 8999999985321100              00112345


Q ss_pred             cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      |...|.++.|++++++|++|+.||.|++||...++.+..+.+|...|.++.+.+  ++..+++++.++.+++||.++...
T Consensus       120 ~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~~~~~~~~i~~~d~~~~~~  197 (388)
T d1erja_         120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQC  197 (388)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEE
T ss_pred             CCCCEEEEEECCCCCcceeccccccccccccccccccccccccccccccccccc--ccccccccccceeeeeeecccccc
Confidence            778899999999999999999999999999999999999999999999887754  578999999999999999988766


Q ss_pred             EEEeccCC------------cc---ccCCCeEEEEECcCCeeeeee-------cCCCCCeEEEEEcCCCCEEEEeeCCCe
Q psy14961        144 VQSFEGHH------------NL---ITDDKLVNIWDMRTGYCVQSF-------EGHQSDVNSVKFHPSGDAVATGSDDAT  201 (320)
Q Consensus       144 ~~~~~~~~------------~~---~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~v~~~p~g~~l~s~s~dg~  201 (320)
                      ......+.            ..   .+.|+.|++||.+++.....+       .+|...|.+++|+|++++|++++.||.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~  277 (388)
T d1erja_         198 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS  277 (388)
T ss_dssp             EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             ccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence            54432221            11   246889999999988766544       468889999999999999999999999


Q ss_pred             EEEEECCCCeeEeEEecC----------cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEE
Q psy14961        202 CRLFDLRADKEVACYKKD----------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQ  271 (320)
Q Consensus       202 i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~  271 (320)
                      |++||++..+........          .....+.+++|+|++++|++|+.||.|++||+.+++++.++.+|.+.|.+++
T Consensus       278 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~  357 (388)
T d1erja_         278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA  357 (388)
T ss_dssp             EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred             EEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEE
Confidence            999999765432211100          0012357899999999999999999999999999999999999999999997


Q ss_pred             E------CcCCCeEEEecCCCceEeeecch
Q psy14961        272 V------SPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       272 ~------s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +      +|++++|||||.|++||+|+.++
T Consensus       358 ~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k  387 (388)
T d1erja_         358 VANGSSLGPEYNVFATGSGDCKARIWKYKK  387 (388)
T ss_dssp             ECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             EecCcccCCCCCEEEEEeCCCEEEEEeeee
Confidence            4      67899999999999999999754

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.1e-39  Score=274.78  Aligned_cols=263  Identities=17%  Similarity=0.197  Sum_probs=217.3

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      +++||+.+.+....+..|...|++++|+|+|++|++|+.||+|++|++.....  .....+..|...|.++.|+++++.+
T Consensus        40 v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~v~~s~d~~~l  117 (311)
T d1nr0a1          40 VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH--ILKTTIPVFSGPVKDISWDSESKRI  117 (311)
T ss_dssp             EEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC--CEEEEEECSSSCEEEEEECTTSCEE
T ss_pred             EEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccc--ccccccccccCcccccccccccccc
Confidence            46899988877777778899999999999999999999999999999864322  2234567899999999999999999


Q ss_pred             EEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         81 LTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        81 ~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      ++++.  ++.+++|++++++....+.+|...|.+++|+|  +++ .|++|+.|+.|++||+++++..             
T Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~--~~~~~l~sgs~d~~i~i~d~~~~~~~-------------  182 (311)
T d1nr0a1         118 AAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKP--SRPFRIISGSDDNTVAIFEGPPFKFK-------------  182 (311)
T ss_dssp             EEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECS--SSSCEEEEEETTSCEEEEETTTBEEE-------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccc--cceeeecccccccccccccccccccc-------------
Confidence            98886  46699999999999999999999999998865  455 5889999999999998765433             


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-----eeeeEEEEEec
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-----LFGATSVDFSV  232 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~s~  232 (320)
                                    ..+.+|..+|.+++|+|+++++++++.|+.+++||+..++....+.....     ...+.+++|+|
T Consensus       183 --------------~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~  248 (311)
T d1nr0a1         183 --------------STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP  248 (311)
T ss_dssp             --------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred             --------------cccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence                          34456888999999999999999999999999999998877665543221     12467899999


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      ++++|++|+.||.|++||..+++.+.++..|.. ....+.+.+++..|+++|.||.|++||.+
T Consensus       249 ~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence            999999999999999999999998888877653 23344455556689999999999999863

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1e-36  Score=266.99  Aligned_cols=248  Identities=17%  Similarity=0.169  Sum_probs=200.0

Q ss_pred             CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961         18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      ..++|++++|+|+|++||+|+.|+.|++|+....  .......+.+|...|.++.|++++++|++|+.|++|++||+.++
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~--~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~   83 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR   83 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT--EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCC--CEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc
Confidence            4578999999999999999999999999998532  22345567899999999999999999999999999999999876


Q ss_pred             ce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         98 QL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        98 ~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      ..  ...+..|...+.+++|.|  +++.|++++.|+.+++|++........                       ......
T Consensus        84 ~~~~~~~~~~~~~~v~~i~~~p--~~~~l~~~s~d~~i~i~~~~~~~~~~~-----------------------~~~~~~  138 (371)
T d1k8kc_          84 TWKPTLVILRINRAARCVRWAP--NEKKFAVGSGSRVISICYFEQENDWWV-----------------------CKHIKK  138 (371)
T ss_dssp             EEEEEEECCCCSSCEEEEEECT--TSSEEEEEETTSSEEEEEEETTTTEEE-----------------------EEEECT
T ss_pred             cccccccccccccccccccccc--ccccceeecccCcceeeeeeccccccc-----------------------cccccc
Confidence            43  445567888999988854  688999999999999998755421111                       122345


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE----------------eEEecCcceeeeEEEEEecCCcEEEE
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV----------------ACYKKDSILFGATSVDFSVSGRLLFA  239 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~----------------~~~~~~~~~~~~~~~~~s~~~~~l~~  239 (320)
                      +|...|.+++|+|++.+|++|+.|+++++||.......                ...........+.+++|+|++++|++
T Consensus       139 ~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  218 (371)
T d1k8kc_         139 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW  218 (371)
T ss_dssp             TCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred             ccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccc
Confidence            68889999999999999999999999999997643210                01111111123578999999999999


Q ss_pred             EeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        240 GYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       240 g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      |+.|+.|++||..+...+..+..|..+|.+++|+||+++|++|+ |+.+++|..
T Consensus       219 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~  271 (371)
T d1k8kc_         219 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTY  271 (371)
T ss_dssp             EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEE
T ss_pred             cccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEc-CCceEEEEe
Confidence            99999999999999889999999999999999999998888665 777776654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.5e-36  Score=255.79  Aligned_cols=240  Identities=19%  Similarity=0.269  Sum_probs=197.6

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL   99 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~   99 (320)
                      ..+..++++|+|+.|+.++ ++.+.+|++...    .....+.+|...|+++.|+|++++|++|+.||+|++||+.++..
T Consensus        18 ~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~----~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~   92 (311)
T d1nr0a1          18 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL----TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH   92 (311)
T ss_dssp             TCCCCCEECTTSSEEEEEE-TTEEEEEETTCS----SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred             CCeEEEEEcCCCCEEEEEe-CCEEEEEECCCC----ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccc
Confidence            3456789999999999885 677999998532    23345678999999999999999999999999999999988754


Q ss_pred             e--eecccCccceeEEEEeeCCCCCEEEEEeCC--CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961        100 L--QSFHGHTGELMDLDLAPSETGNTFVSGSSD--KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus       100 ~--~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      .  ..+..|.++|.+++|.  ++++.|++++.+  ..+++|++.++                           ++...+.
T Consensus        93 ~~~~~~~~~~~~v~~v~~s--~d~~~l~~~~~~~~~~~~v~~~~~~---------------------------~~~~~l~  143 (311)
T d1nr0a1          93 ILKTTIPVFSGPVKDISWD--SESKRIAAVGEGRERFGHVFLFDTG---------------------------TSNGNLT  143 (311)
T ss_dssp             CEEEEEECSSSCEEEEEEC--TTSCEEEEEECCSSCSEEEEETTTC---------------------------CBCBCCC
T ss_pred             ccccccccccCcccccccc--ccccccccccccccccccccccccc---------------------------ccccccc
Confidence            3  4577899999988875  468889888764  44667766544                           3445567


Q ss_pred             CCCCCeEEEEEcCCCCE-EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        176 GHQSDVNSVKFHPSGDA-VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      +|...|.+++|+|++++ |++|+.|+.|++||+++.+....+..+..  .+.++.|+|+++++++|+.|+.|++||....
T Consensus       144 ~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~--~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~  221 (311)
T d1nr0a1         144 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK--FVHSVRYNPDGSLFASTGGDGTIVLYNGVDG  221 (311)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             ccccccccccccccceeeecccccccccccccccccccccccccccc--cccccccCccccccccccccccccccccccc
Confidence            78899999999999885 78899999999999998877766554432  3578999999999999999999999998887


Q ss_pred             eEEEEe-------ecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        255 CRVNHL-------MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       255 ~~~~~~-------~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .....+       .+|.++|++++|+|++++|++||.|++|++||..+
T Consensus       222 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t  269 (311)
T d1nr0a1         222 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT  269 (311)
T ss_dssp             CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             cccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence            766554       36889999999999999999999999999999643

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.3e-35  Score=258.27  Aligned_cols=280  Identities=18%  Similarity=0.164  Sum_probs=211.0

Q ss_pred             CeEeecccce--eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQT--KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~--~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |+|||..+++  ....+..|...|.+++|+|++++|++|+.|+.|++|++...  .......+..|...|.++.|+++++
T Consensus        31 i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~--~~~~~~~~~~~~~~v~~i~~~p~~~  108 (371)
T d1k8kc_          31 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR--TWKPTLVILRINRAARCVRWAPNEK  108 (371)
T ss_dssp             EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT--EEEEEEECCCCSSCEEEEEECTTSS
T ss_pred             EEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc--ccccccccccccccccccccccccc
Confidence            5799998765  44556678899999999999999999999999999998532  2223344567889999999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcce----eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961         79 QILTGSGDCTCALWDVESSQL----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI  154 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~  154 (320)
                      .+++++.|+++++|+++....    ......|...|.+++++  |++.+|++|+.|+.+++||+.............   
T Consensus       109 ~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~--p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~---  183 (371)
T d1k8kc_         109 KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH--PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP---  183 (371)
T ss_dssp             EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC--TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBT---
T ss_pred             cceeecccCcceeeeeeccccccccccccccccccccccccc--ccccceeccccCcEEEEEeeccCcccccccccc---
Confidence            999999999999999866442    33455688889888875  468899999999999999987643211110000   


Q ss_pred             cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961        155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG  234 (320)
Q Consensus       155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~  234 (320)
                       .+     -+...+.......+|...|.+++|+|+|++|++++.|+.|++||+.+++.+..+..+..  .+.+++|+|++
T Consensus       184 -~~-----~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~s~~fs~d~  255 (371)
T d1k8kc_         184 -WG-----SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL--PLLAVTFITES  255 (371)
T ss_dssp             -TB-----SCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSC--CEEEEEEEETT
T ss_pred             -cc-----ccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccc--cceeeeecCCC
Confidence             00     01123455666778999999999999999999999999999999998887766655432  35789999999


Q ss_pred             cEEEEEeCCCeEEEE--cCCCCeEEE---------------------------------------EeecCCCceeEEEEC
Q psy14961        235 RLLFAGYNDYTINVW--DSLKCCRVN---------------------------------------HLMGHENRVSCLQVS  273 (320)
Q Consensus       235 ~~l~~g~~dg~v~~w--d~~~~~~~~---------------------------------------~~~~h~~~i~~i~~s  273 (320)
                      ++|++|+ |+.+.+|  +........                                       ....|.+.|++|++.
T Consensus       256 ~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~  334 (371)
T d1k8kc_         256 SLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVL  334 (371)
T ss_dssp             EEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEE
T ss_pred             CEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEe
Confidence            9888765 6666665  332211100                                       001388899999998


Q ss_pred             cCC----CeEEEecCCCceEeeecchH
Q psy14961        274 PDG----TAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       274 ~~~----~~l~s~s~D~~ir~~~~~~~  296 (320)
                      |.+    ..|+|+|.||+||+|+.+..
T Consensus       335 ~~~~~~~~~~~T~g~Dg~v~iW~~~~~  361 (371)
T d1k8kc_         335 SGGKAKCSQFCTTGMDGGMSIWDVRSL  361 (371)
T ss_dssp             ESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             CCCCcceEEEEEEcCCCeEEEEeCCcC
Confidence            854    35899999999999998554

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-35  Score=249.25  Aligned_cols=281  Identities=22%  Similarity=0.403  Sum_probs=213.7

Q ss_pred             eecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE
Q psy14961          4 WDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG   83 (320)
Q Consensus         4 W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~   83 (320)
                      |+..+.+....+..|...|.+| ++++|++|+||+.||+|+|||+..    .....++.+|...|.++.|++  ..+++|
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s~-~~~~g~~l~sgs~Dg~i~vWd~~~----~~~~~~~~~h~~~V~~v~~~~--~~l~s~   73 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVT----GKCLRTLVGHTGGVWSSQMRD--NIIISG   73 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEEE-EEEETTEEEEEETTSCEEEEETTT----CCEEEECCCCSSCEEEEEEET--TEEEEE
T ss_pred             CCCCCCCcCEEECCcCCceEEE-EEECCCEEEEEeCCCeEEEEECCC----CCEEEEEeCCCCCEEEEEeCC--Cccccc
Confidence            6655666666678899888764 777899999999999999999852    234567889999999999975  489999


Q ss_pred             eCCCeEEEEECCCcceeeecccCccceeEEE------------------------------------EeeCCCCCEEEEE
Q psy14961         84 SGDCTCALWDVESSQLLQSFHGHTGELMDLD------------------------------------LAPSETGNTFVSG  127 (320)
Q Consensus        84 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~------------------------------------~~~~~~~~~l~s~  127 (320)
                      +.|+.+++|+............+...+....                                    .........++++
T Consensus        74 s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (342)
T d2ovrb2          74 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG  153 (342)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEE
T ss_pred             eecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeee
Confidence            9999999999876543322221111111000                                    0011123567888


Q ss_pred             eCCCeEEEEeCCCCcEEEEeccCCcc-------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEE
Q psy14961        128 SSDKLVNIWDMRTGYCVQSFEGHHNL-------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA  194 (320)
Q Consensus       128 ~~dg~i~lwd~~~~~~~~~~~~~~~~-------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~  194 (320)
                      +.|+.+++||++....+..+.+|...             .+.|+.|++||++.++++..+.+|...+.++++++  ++|+
T Consensus       154 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~  231 (342)
T d2ovrb2         154 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILV  231 (342)
T ss_dssp             ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET--TEEE
T ss_pred             cCCCeEEEeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC--CEEE
Confidence            88899999998887777766655432             14689999999999999999999999999888875  6999


Q ss_pred             EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-----cCCCceeE
Q psy14961        195 TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-----GHENRVSC  269 (320)
Q Consensus       195 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-----~h~~~i~~  269 (320)
                      +++.|+.|++||+...+....+...... ......+++++.++++|+.||+|++||+.+++.+.++.     +|...|++
T Consensus       232 s~s~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~  310 (342)
T d2ovrb2         232 SGNADSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR  310 (342)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEE
T ss_pred             EEcCCCEEEEEeccccccccccccccee-eeceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEE
Confidence            9999999999999887766555433221 11233455677899999999999999999988877664     57889999


Q ss_pred             EEECcCCCeEEEecCCCc----eEeeecc
Q psy14961        270 LQVSPDGTAFSSGSWDTT----LRDEESK  294 (320)
Q Consensus       270 i~~s~~~~~l~s~s~D~~----ir~~~~~  294 (320)
                      ++|+|++.+||+|+.||+    |++||..
T Consensus       311 v~~s~~~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         311 IRASNTKLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             EEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred             EEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence            999999999999999996    8899863

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-34  Score=245.12  Aligned_cols=243  Identities=19%  Similarity=0.331  Sum_probs=201.6

Q ss_pred             CeEeecccceeEE-----EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961          1 MIIWDGLTQTKEH-----SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN   75 (320)
Q Consensus         1 ~~~W~~~~~~~~~-----~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~   75 (320)
                      |+|||+.+.....     ....|..+|.+++|+|++++|++|+.||.|++||+...  .......+..|...+.++.|++
T Consensus        74 V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~  151 (337)
T d1gxra_          74 VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP--TPRIKAELTSSAPACYALAISP  151 (337)
T ss_dssp             EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC----EEEEEEECSSSCEEEEEECT
T ss_pred             EEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccccc--cccccccccccccccccccccc
Confidence            5799987654221     22346788999999999999999999999999998532  2233445678889999999999


Q ss_pred             CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC----
Q psy14961         76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH----  151 (320)
Q Consensus        76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~----  151 (320)
                      ++..+++++.|+.|++|++.++++......|...+.+++++  +++..+++++.|+.+++||+++++.+..+....    
T Consensus       152 ~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s--~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~  229 (337)
T d1gxra_         152 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS--NDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS  229 (337)
T ss_dssp             TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccceeecccccccceEE
Confidence            99999999999999999999999888888899999988775  468899999999999999999988766543211    


Q ss_pred             -------cc---ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc
Q psy14961        152 -------NL---ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       152 -------~~---~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~  221 (320)
                             ..   ...++.+++||++++... ....|...|.+++|+|++++|++++.||.|++||+.+++.+....+.. 
T Consensus       230 l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-  307 (337)
T d1gxra_         230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-  307 (337)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-
T ss_pred             EEEcccccccceeccccccccccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCC-
Confidence                   11   246889999999887765 456799999999999999999999999999999999988876665443 


Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWDS  251 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~  251 (320)
                        .+.+++|+|++++|++|+.||+|++||+
T Consensus       308 --~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         308 --SVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             --CEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             --CEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence              3578999999999999999999999984

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.9e-34  Score=244.16  Aligned_cols=278  Identities=21%  Similarity=0.308  Sum_probs=209.0

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+|||..+++.+..+..|...|.+++|+|++ +|++|+.|+.|++|+.....  .........+........+.+++..+
T Consensus        35 i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (355)
T d1nexb2          35 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYI  111 (355)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEETTCCEEEEETTTTE--EEEEECCCSSCEEEEEEEEETTEEEE
T ss_pred             EEEEECCCCcEEEEEECCCCCEEEEEEcCCC-EEEEEecccccccccccccc--ccccccccccccccccccccccccee
Confidence            5799999999999889999999999999864 89999999999999975321  11111122233334455667778899


Q ss_pred             EEEeCCCeEEEEECCCcceeeec-----------------------ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSF-----------------------HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD  137 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~-----------------------~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd  137 (320)
                      ++++.|+.|++||+.+.......                       ..|...+..  .  .++++.++++..|+.+++||
T Consensus       112 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~--~~~~~~~~~~~~d~~i~~~d  187 (355)
T d1nexb2         112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--V--SGHGNIVVSGSYDNTLIVWD  187 (355)
T ss_dssp             EEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE--E--EEETTEEEEEETTSCEEEEE
T ss_pred             eeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccc--c--ccccceeeeecccceeeeee
Confidence            99999999999998765432211                       112222221  1  23568999999999999999


Q ss_pred             CCCCcEEEEeccCCcc---------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961        138 MRTGYCVQSFEGHHNL---------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC  202 (320)
Q Consensus       138 ~~~~~~~~~~~~~~~~---------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i  202 (320)
                      +.+++.+....++...               ...|+.|++||.+++.++..+.+|...|.+++++|  ++|++++.||.|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i  265 (355)
T d1nexb2         188 VAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD--KFLVSAAADGSI  265 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECS--SEEEEECTTSEE
T ss_pred             cccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccccccccccccccccc--ceeeeeeccccc
Confidence            9998877666543321               13689999999999999999999999999999975  689999999999


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEE
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSS  281 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s  281 (320)
                      ++||+++............ .  ....+++++.++++|+ |+.|++||+.+++.+. .+.+|.++|++++|+|+ .++++
T Consensus       266 ~iwd~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~  340 (355)
T d1nexb2         266 RGWDANDYSRKFSYHHTNL-S--AITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAA  340 (355)
T ss_dssp             EEEETTTCCEEEEEECTTC-C--CCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEE
T ss_pred             ccccccccceecccccCCc-e--EEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEE
Confidence            9999998766544433221 1  2245778888887775 8999999999887774 46789999999999997 57889


Q ss_pred             ecCCCceEeee
Q psy14961        282 GSWDTTLRDEE  292 (320)
Q Consensus       282 ~s~D~~ir~~~  292 (320)
                      +|.||++++|-
T Consensus       341 ~s~dg~~~l~~  351 (355)
T d1nexb2         341 VEKDGQSFLEI  351 (355)
T ss_dssp             EESSSCEEEEE
T ss_pred             EECCCcEEEEE
Confidence            99999976654

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.6e-33  Score=238.57  Aligned_cols=272  Identities=14%  Similarity=0.139  Sum_probs=198.2

Q ss_pred             EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961         13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSDQQILTGSGDCTCAL   91 (320)
Q Consensus        13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i   91 (320)
                      ..+..|...|++++|+|++++|++|+.||.|++||+...    .....+ ..|...|.++.|++++. +++++.|+.+++
T Consensus         6 ~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~----~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~   80 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG----ISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKV   80 (299)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC----CEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEE
T ss_pred             eEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCC----cEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEE
Confidence            345679999999999999999999999999999998532    122233 46889999999998875 667788999999


Q ss_pred             EECCCcce---eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE--------EEeccCCcc---ccCC
Q psy14961         92 WDVESSQL---LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV--------QSFEGHHNL---ITDD  157 (320)
Q Consensus        92 wd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~--------~~~~~~~~~---~~~d  157 (320)
                      |+......   ......+...+.++++.  +++..++++ .++.+++|+.......        ..+......   ...+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~g~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  157 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVS--ADGDIAVAA-CYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQD  157 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEEC--TTSSCEEEE-ESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred             eccCCccccccccccccccccccccccc--ccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence            99865432   11223456667667664  467665555 5578999986432111        112222221   2468


Q ss_pred             CeEEEEECcCCeeee-eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-cceeeeEEEEEecCCc
Q psy14961        158 KLVNIWDMRTGYCVQ-SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-SILFGATSVDFSVSGR  235 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~-~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~  235 (320)
                      +.+++||+++++... ....|...|.+++|+|++++|++++.|+.|++||+.++......... .....+.+++|+|+++
T Consensus       158 g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~  237 (299)
T d1nr0a2         158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV  237 (299)
T ss_dssp             SEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999998876543 34568899999999999999999999999999999876554322211 1112467899999999


Q ss_pred             EEEEEeCCCeEEEEcCCCCeE--EEEeecC-CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        236 LLFAGYNDYTINVWDSLKCCR--VNHLMGH-ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~~--~~~~~~h-~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +|++|+.||.|++||+.+...  ......| ...|.++.| +++++|+|||.|++||+|+.
T Consensus       238 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl  297 (299)
T d1nr0a2         238 RLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNV  297 (299)
T ss_dssp             EEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEEC
T ss_pred             ceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEec
Confidence            999999999999999876432  2223334 456777755 56789999999999999996

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-33  Score=238.10  Aligned_cols=242  Identities=24%  Similarity=0.446  Sum_probs=211.5

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI   80 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l   80 (320)
                      |+|||..+++....+..|...|.+++|+|++.++++++.++.+.+|+...    ......+..|...+.++.+.++++.+
T Consensus        41 i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (317)
T d1vyhc1          41 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGHDHNVSSVSIMPNGDHI  116 (317)
T ss_dssp             EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS----SCEEECCCCCSSCEEEEEECSSSSEE
T ss_pred             EEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccc----cccccccccccccceeeeccCCCceE
Confidence            57999999998888888999999999999999999999999999998642    22334466788899999999999999


Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------  154 (320)
                      ++++.|+.+++||+.+++.+..+..|...+.++++  ++++++|++++.|+.|++|++.++.....+.++...+      
T Consensus       117 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~  194 (317)
T d1vyhc1         117 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP--NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA  194 (317)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred             EeeccCcceeEeecccceeeeEEccCCCcceeeec--ccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEe
Confidence            99999999999999999999999999998888776  4568899999999999999999888777665443211      


Q ss_pred             -----------------------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEE
Q psy14961        155 -----------------------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF  205 (320)
Q Consensus       155 -----------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iw  205 (320)
                                                   ..|+.|++||+++++++.++.+|...|.+++|+|++++|++|+.||.|++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  274 (317)
T d1vyhc1         195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW  274 (317)
T ss_dssp             CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEE
T ss_pred             eccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEE
Confidence                                         247889999999999999999999999999999999999999999999999


Q ss_pred             ECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        206 DLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       206 d~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      |+.+++.+..+..+..  .+.+++|+|++++|++|+.||+|++||
T Consensus       275 d~~~~~~~~~~~~h~~--~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         275 DYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             CCTTSCCCEEEECCSS--CEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             ECCCCcEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            9999888777765432  367899999999999999999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-33  Score=240.78  Aligned_cols=268  Identities=19%  Similarity=0.318  Sum_probs=204.7

Q ss_pred             EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961         14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD   93 (320)
Q Consensus        14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd   93 (320)
                      .+..|...|..| +++++++|++|+.||+|++||+..    .....++.+|...|.++.|++ ++.|++|+.|++|++|+
T Consensus         7 tL~GH~~~vitc-~~~~~~~l~tgs~Dg~i~vWd~~~----~~~~~~l~~H~~~V~~l~~s~-~~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           7 TLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSIN----KKFLLQLSGHDGGVWALKYAH-GGILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEECCSSSCEEE-EEEETTEEEEEETTTEEEEEETTT----TEEEEEEECCSSCEEEEEEET-TTEEEEEETTCCEEEEE
T ss_pred             EECCcCCCcEEE-EEECCCEEEEEeCCCeEEEEECCC----CcEEEEEECCCCCEEEEEEcC-CCEEEEEeccccccccc
Confidence            456787776433 455788999999999999999742    344567889999999999987 46899999999999999


Q ss_pred             CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-----------------------ccC
Q psy14961         94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-----------------------EGH  150 (320)
Q Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-----------------------~~~  150 (320)
                      ....+....................+++..+++++.|+.|++||++........                       ..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  160 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence            998877665554444444444455567789999999999999999765432211                       011


Q ss_pred             Cc-------------cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961        151 HN-------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK  217 (320)
Q Consensus       151 ~~-------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~  217 (320)
                      ..             ....|+.+++||+++++.+....++...+.++.++|++..+++++.|+.|++||++++..+..+.
T Consensus       161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~  240 (355)
T d1nexb2         161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ  240 (355)
T ss_dssp             SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             cccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccc
Confidence            10             01357889999999999999999999999999999999999999999999999999988777665


Q ss_pred             cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEE-EECcCCCeEEEecCCCceEeeecc
Q psy14961        218 KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCL-QVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       218 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i-~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                      .+..  .+.+++++  +++|++|+.||.|++||+.+..+.  +..|...+.++ +|++++++|++| .|++|++|+.+
T Consensus       241 ~h~~--~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~  311 (355)
T d1nexb2         241 GHTA--LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK--FSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLR  311 (355)
T ss_dssp             CCSS--CCCEEEEC--SSEEEEECTTSEEEEEETTTCCEE--EEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETT
T ss_pred             cccc--cccccccc--cceeeeeeccccccccccccccee--cccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECC
Confidence            5433  24556554  679999999999999998876554  45566666665 556777776665 58999999964

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-32  Score=227.73  Aligned_cols=256  Identities=23%  Similarity=0.404  Sum_probs=201.1

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      .+...|+++.  ++|++|++|+.||+|++||+..    ......+.+|...|.++.|  ++++|++|+.|+.|++|++..
T Consensus        13 ~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~----~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~   84 (293)
T d1p22a2          13 ETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNT----LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT   84 (293)
T ss_dssp             SSCCCEEEEE--CCSSEEEEEESSSCEEEEESSS----CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred             CCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCC----CcEEEEEecCCCCEeeeec--ccceeeccccccccccccccc
Confidence            4556788764  5799999999999999999852    3345677899999999987  567999999999999999998


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE---EEEeccCCcc-------------ccCCCeE
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---VQSFEGHHNL-------------ITDDKLV  160 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---~~~~~~~~~~-------------~~~d~~i  160 (320)
                      +........+.....  ...+  ....++++..++.+.+||......   ...+..+...             .+.|+.+
T Consensus        85 ~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i  160 (293)
T d1p22a2          85 GEMLNTLIHHCEAVL--HLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI  160 (293)
T ss_dssp             CCEEEEECCCCSCEE--EEEC--CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEE
T ss_pred             ccccccccccccccc--cccc--cccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCce
Confidence            877665554433332  2222  346899999999999999876542   2222222221             2468999


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  240 (320)
                      ++||+++++++..+.+|...+..+.++  +..+++++.||.|++||+++.+.+..+......    ...+++++.+|++|
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----v~~~~~~~~~l~sg  234 (293)
T d1p22a2         161 KVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL----VRCIRFDNKRIVSG  234 (293)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEECCSSEEEEE
T ss_pred             eeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeeccccee----eeeccccceEEEEE
Confidence            999999999999999999999888876  468999999999999999988877665543321    23467889999999


Q ss_pred             eCCCeEEEEcCCC---------CeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961        241 YNDYTINVWDSLK---------CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE  292 (320)
Q Consensus       241 ~~dg~v~~wd~~~---------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~  292 (320)
                      +.||.|++||+..         ...+..+.+|.++|++++|+  +++|+|||.|++||+||
T Consensus       235 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             cCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            9999999998432         34567789999999999995  56899999999999997

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.4e-32  Score=234.81  Aligned_cols=264  Identities=19%  Similarity=0.149  Sum_probs=199.7

Q ss_pred             Eeeccccee--EEEEEeC-ccceEEEEEcC--CCCEEEEecCCCeEEEEEecccCCccc----ccccccccccCeEEEEe
Q psy14961          3 IWDGLTQTK--EHSVTMP-ATWVMACAYAP--SGSVVASGGLDNKVTVYAIALEDDSSA----KKKTVATHTSFISCCIF   73 (320)
Q Consensus         3 ~W~~~~~~~--~~~~~~~-~~~V~~~~~~~--~~~~l~s~~~dg~i~v~~~~~~~~~~~----~~~~~~~h~~~v~~~~~   73 (320)
                      .||....+.  ...+..| ...|++++|+|  ++.+|++|+.||+|++||+........    ....+..|...|.++.|
T Consensus        44 ~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~  123 (325)
T d1pgua1          44 CLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW  123 (325)
T ss_dssp             ECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE
T ss_pred             EEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEE
Confidence            455544332  2334444 35799999998  668999999999999999854322111    11234567889999999


Q ss_pred             cCCCCEEEEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961         74 PNSDQQILTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH  151 (320)
Q Consensus        74 ~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~  151 (320)
                      +++++.+++++.  ++.+++|+.++++.+..+.+|...+.++++.+.. ...+++++.|+.+++||+...+....+    
T Consensus       124 s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~----  198 (325)
T d1pgua1         124 DFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR-PMRSMTVGDDGSVVFYQGPPFKFSASD----  198 (325)
T ss_dssp             CTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSS-SCEEEEEETTTEEEEEETTTBEEEEEE----
T ss_pred             CCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccc-cceEEEeecccccccccccccccceec----
Confidence            999999887764  6789999999999999999999999999887642 246788999999999998776543332    


Q ss_pred             ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961        152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF  230 (320)
Q Consensus       152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  230 (320)
                                          ....+|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+..+....  ..+.|
T Consensus       199 --------------------~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v--~~~~~  256 (325)
T d1pgua1         199 --------------------RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV--QGGIF  256 (325)
T ss_dssp             --------------------CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC--CSCEE
T ss_pred             --------------------ccccCCCCccEEeeeccccceeccccccccceeeeeecccccccccccccccc--cccee
Confidence                                123457788999999997 6889999999999999999988776665433221  22223


Q ss_pred             e---cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC--ceeEEEECcC-CCeEEEecCCCceEeeec
Q psy14961        231 S---VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN--RVSCLQVSPD-GTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       231 s---~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~--~i~~i~~s~~-~~~l~s~s~D~~ir~~~~  293 (320)
                      +   |+|++|++|+.|+.|++||+.+++.+..+..|..  .+..++|.+. +.+|+|||.|++|++||.
T Consensus       257 s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         257 ALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             eeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            3   7899999999999999999999988888776654  3445555543 347899999999999984

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-32  Score=239.93  Aligned_cols=259  Identities=22%  Similarity=0.355  Sum_probs=200.3

Q ss_pred             EEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecc---------
Q psy14961         34 VASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFH---------  104 (320)
Q Consensus        34 l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---------  104 (320)
                      .+.+..++...+|+...............+|.+.|+|+.|++++++|++|+ |++|++||+.+++.+..+.         
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~  109 (388)
T d1erja_          31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP  109 (388)
T ss_dssp             TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------
T ss_pred             ccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccc
Confidence            456667788889976433322222233447999999999999999999886 8999999999887765543         


Q ss_pred             ---------cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeE
Q psy14961        105 ---------GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLV  160 (320)
Q Consensus       105 ---------~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i  160 (320)
                               .|...|.+++|+  +++++|++|+.||.|++||...++.+..+.+|...+               ..++.+
T Consensus       110 ~~~~~~~~~~~~~~V~~l~~s--~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i  187 (388)
T d1erja_         110 ENLNTSSSPSSDLYIRSVCFS--PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV  187 (388)
T ss_dssp             ---------CCCCBEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             cccccccccCCCCCEEEEEEC--CCCCcceecccccccccccccccccccccccccccccccccccccccccccccceee
Confidence                     355668888774  568999999999999999999998887776665432               357899


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-----eeeeEEEEEecCCc
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-----LFGATSVDFSVSGR  235 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~  235 (320)
                      ++||.++.........+...+..+.+.+++.+|++++.|+.|++||..++.....+.....     ...+.+++|+|+++
T Consensus       188 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~  267 (388)
T d1erja_         188 RIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ  267 (388)
T ss_dssp             EEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS
T ss_pred             eeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCC
Confidence            9999999888877766665554444455789999999999999999998876655432211     12467899999999


Q ss_pred             EEEEEeCCCeEEEEcCCCCe------------EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        236 LLFAGYNDYTINVWDSLKCC------------RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       236 ~l~~g~~dg~v~~wd~~~~~------------~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +|++|+.||.|++||+....            .......|...|.+++|+|++++|++|+.|++|++||..+
T Consensus       268 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~  339 (388)
T d1erja_         268 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS  339 (388)
T ss_dssp             EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred             EEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence            99999999999999976432            2345568999999999999999999999999999999754

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-31  Score=224.72  Aligned_cols=257  Identities=13%  Similarity=0.142  Sum_probs=195.1

Q ss_pred             eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961         10 TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC   89 (320)
Q Consensus        10 ~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v   89 (320)
                      +.+..+..|...|++++|+|    |++|+.||+|++||+..         ....|...|.++.+.++ ..+++++.|+++
T Consensus         4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~---------~~~~h~~~V~~~~~~~~-~~~~s~s~D~~v   69 (287)
T d1pgua2           4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS---------MHQDHSNLIVSLDNSKA-QEYSSISWDDTL   69 (287)
T ss_dssp             EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTE---------EECCCCSCEEEEECCST-TCCEEEETTTEE
T ss_pred             ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCC---------CCCCCCCCEEEEEecCC-CeEEEEeecccc
Confidence            44556778999999999987    99999999999997632         23478899999998764 578999999999


Q ss_pred             EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc-----------c--cC
Q psy14961         90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-----------I--TD  156 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~-----------~--~~  156 (320)
                      ++|++...+.       ...+..+.+  .+++ .++..+.++.+.+|+..++..+..+..+...           +  .+
T Consensus        70 ~~w~~~~~~~-------~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  139 (287)
T d1pgua2          70 KVNGITKHEF-------GSQPKVASA--NNDG-FTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEE  139 (287)
T ss_dssp             EETTEEEEEC-------SSCEEEEEE--CSSS-EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETT
T ss_pred             cccccccccc-------ccceeeeee--ccCC-ceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccc
Confidence            9998764321       223444444  4444 4445556677889999888877665432211           1  13


Q ss_pred             CCeEEEEECcCCeeeeee-cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE-EecCcceeeeEEEEEec--
Q psy14961        157 DKLVNIWDMRTGYCVQSF-EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC-YKKDSILFGATSVDFSV--  232 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~-~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~s~--  232 (320)
                      ++.+++|++........+ ..|...+.+++|+|++.+|++|+.||.|++||+.+++.... +..+.  ..+.+++|+|  
T Consensus       140 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~--~~v~~~~~~p~~  217 (287)
T d1pgua2         140 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT--SKINAISWKPAE  217 (287)
T ss_dssp             TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS--SCEEEEEECCCC
T ss_pred             cceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccc--cccceeeecccc
Confidence            467999998776655544 34778899999999999999999999999999988765432 12221  2356777776  


Q ss_pred             --------CCcEEEEEeCCCeEEEEcCCC-CeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        233 --------SGRLLFAGYNDYTINVWDSLK-CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       233 --------~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                              ++.++++|+.|++|++||+.+ ...+..+.+|.+.|++++|+|++ .|+|+|.|++||+|+.
T Consensus       218 ~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             ------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             cccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence                    456899999999999999866 45566677999999999999986 5899999999999984

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.6e-30  Score=219.69  Aligned_cols=235  Identities=19%  Similarity=0.321  Sum_probs=197.9

Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ...++.+|.+.|+++.|++++++|++|+.||+|++||+.+++.+..+..|...|.++++.  ++++++++++.|+.+++|
T Consensus        47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~--~~~~~l~~~~~d~~i~~~  124 (340)
T d1tbga_          47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA--PSGNYVACGGLDNICSIY  124 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEEC--TTSSEEEEEETTCCEEEE
T ss_pred             eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEee--ccceeeeeecccceeecc
Confidence            345688999999999999999999999999999999999999999999999999998885  468899999999999999


Q ss_pred             eCCCCc----EEEEeccCCcc--------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        137 DMRTGY----CVQSFEGHHNL--------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       137 d~~~~~----~~~~~~~~~~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      +.....    ....+.++...              ...+.....+.............+...+....+.+.+..+++++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (340)
T d1tbga_         125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC  204 (340)
T ss_dssp             ESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeec
Confidence            975532    33334333322              124666777777777777777778889999999999999999999


Q ss_pred             CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe--ecCCCceeEEEECcCC
Q psy14961        199 DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL--MGHENRVSCLQVSPDG  276 (320)
Q Consensus       199 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~--~~h~~~i~~i~~s~~~  276 (320)
                      |+.+++||+++++.+..+..+..  .+.+++|+|++.+|++|+.||.|++||.........+  ..|..+|.+++|+|++
T Consensus       205 d~~v~i~d~~~~~~~~~~~~h~~--~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  282 (340)
T d1tbga_         205 DASAKLWDVREGMCRQTFTGHES--DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG  282 (340)
T ss_dssp             TTEEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSS
T ss_pred             CceEEEEECCCCcEEEEEeCCCC--CeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCC
Confidence            99999999999988776655432  4678999999999999999999999999887776554  3567789999999999


Q ss_pred             CeEEEecCCCceEeeecch
Q psy14961        277 TAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       277 ~~l~s~s~D~~ir~~~~~~  295 (320)
                      ++|++|+.|++|++|+...
T Consensus       283 ~~l~~g~~dg~i~iwd~~~  301 (340)
T d1tbga_         283 RLLLAGYDDFNCNVWDALK  301 (340)
T ss_dssp             CEEEEEETTSCEEEEETTT
T ss_pred             CEEEEEECCCEEEEEECCC
Confidence            9999999999999999643

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.9e-32  Score=230.24  Aligned_cols=275  Identities=16%  Similarity=0.235  Sum_probs=199.5

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC-CEEEEEeCCCeEEEEEC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD-QQILTGSGDCTCALWDV   94 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~   94 (320)
                      ..|.+.|++++|+|++++|++|+.||+|+|||+....... .......|...|.++.|++++ ..|++|+.||.|++|+.
T Consensus         8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~-~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~   86 (342)
T d1yfqa_           8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL   86 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE-EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred             CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcce-EEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeec
Confidence            4688999999999999999999999999999986433222 223344699999999997654 57899999999999999


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE----EEEeccC--------------C---cc
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC----VQSFEGH--------------H---NL  153 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~----~~~~~~~--------------~---~~  153 (320)
                      ...........+........+.+ ++...+++++.++.+++||++.+..    ......+              .   ..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (342)
T d1yfqa_          87 IGSPSFQALTNNEANLGICRICK-YGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIV  165 (342)
T ss_dssp             SSSSSEEECBSCCCCSCEEEEEE-ETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEE
T ss_pred             ccccccccccccccccccccccc-cccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceee
Confidence            88776665554544443333332 3457999999999999999854321    1111111              0   11


Q ss_pred             ccCCCeEEEEECcCCeeee---eecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEe---------EEe---
Q psy14961        154 ITDDKLVNIWDMRTGYCVQ---SFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVA---------CYK---  217 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~---------~~~---  217 (320)
                      ...++.+++||++......   ....+...+.+..+.| ++..+++++.||.+.+|++.......         ...   
T Consensus       166 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  245 (342)
T d1yfqa_         166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL  245 (342)
T ss_dssp             EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred             ecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeecc
Confidence            2468999999997754332   2233445566666655 56789999999999999976432210         000   


Q ss_pred             -cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        218 -KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       218 -~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                       .......+.+++|+|++.+||+|+.||.|++||+.+++++.++..+ ..+..++|+|++++|++|+.|.++++|..
T Consensus       246 ~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~  321 (342)
T d1yfqa_         246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred             CCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence             0112234678999999999999999999999999999888877543 34567888999999999999999888864

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8e-31  Score=221.71  Aligned_cols=231  Identities=16%  Similarity=0.192  Sum_probs=178.4

Q ss_pred             cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      .+.+.+|...|+++.|++++++|++|+.||+|++||+++++.+..+. .|...|.++++.+  ++. +++++.|+.+++|
T Consensus         5 ~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~--~g~-~~~~~~d~~v~~~   81 (299)
T d1nr0a2           5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS--KGD-LFTVSWDDHLKVV   81 (299)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT--TSC-EEEEETTTEEEEE
T ss_pred             ceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeec--cce-eecccceeeEEEe
Confidence            45678999999999999999999999999999999999998887774 6888999988865  555 6677789999999


Q ss_pred             eCCCCcE-----E----------EEeccC--CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        137 DMRTGYC-----V----------QSFEGH--HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       137 d~~~~~~-----~----------~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                      +......     .          ..+...  ......++.+.+|+....  ....  ....+.+++|+|+++++++++.|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~--~~~~--~~~~~~~~~~s~~~~~l~~g~~d  157 (299)
T d1nr0a2          82 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL--TEVP--ISYNSSCVALSNDKQFVAVGGQD  157 (299)
T ss_dssp             CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE--EEEE--CSSCEEEEEECTTSCEEEEEETT
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccccccccc--cccc--ccccccccccccccccccccccc
Confidence            9754321     0          011111  112234667889985432  2222  33467899999999999999999


Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE---EEeecCCCceeEEEECcCC
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV---NHLMGHENRVSCLQVSPDG  276 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~---~~~~~h~~~i~~i~~s~~~  276 (320)
                      +.+++||+++++........ ....+.+++|+|++++|++|+.++.|++||..+....   ..+.+|..+|++++|+|++
T Consensus       158 g~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~  236 (299)
T d1nr0a2         158 SKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN  236 (299)
T ss_dssp             SEEEEEEEETTEEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999877643322111 1123678999999999999999999999997765443   3456799999999999999


Q ss_pred             CeEEEecCCCceEeeecchH
Q psy14961        277 TAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       277 ~~l~s~s~D~~ir~~~~~~~  296 (320)
                      ++|++|+.|++|++|+.+..
T Consensus       237 ~~l~sgs~dg~i~iwd~~~~  256 (299)
T d1nr0a2         237 VRLATGSLDNSVIVWNMNKP  256 (299)
T ss_dssp             SEEEEEETTSCEEEEETTCT
T ss_pred             cceEEEcCCCEEEEEECCCC
Confidence            99999999999999997554

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-30  Score=223.20  Aligned_cols=245  Identities=16%  Similarity=0.185  Sum_probs=185.3

Q ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccc-ccCeEEEEecC--CCCEEEEEeCCCeEEEEECCCc
Q psy14961         21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH-TSFISCCIFPN--SDQQILTGSGDCTCALWDVESS   97 (320)
Q Consensus        21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~   97 (320)
                      .+++++|+|+++.|+.++.+. +.++.++...........+.+| ...|+++.|+|  ++++|++|+.||+|++||+..+
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~-~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~   97 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKS-AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD   97 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTE-EEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCC-EEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCC
Confidence            567899999999999886443 3344333222223334455666 56899999986  5678999999999999998654


Q ss_pred             cee--------eecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         98 QLL--------QSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        98 ~~~--------~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                      +..        ..+..|.++|.++++.  +++..+++++.  ++.+++|+..++                          
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~v~~v~~s--~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------  149 (325)
T d1pgua1          98 KESNSVEVNVKSEFQVLAGPISDISWD--FEGRRLCVVGEGRDNFGVFISWDSG--------------------------  149 (325)
T ss_dssp             GGGTEEEEEEEEEEECCSSCEEEEEEC--TTSSEEEEEECCSSCSEEEEETTTC--------------------------
T ss_pred             cceeeeecccccccccccCcEEEEEEC--CCCCccceeeccccceEEEEeeccc--------------------------
Confidence            322        2345677889888774  46788887664  445666665544                          


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCE-EEEeeCCCeEEEEECCCCeeEeEEecC-cceeeeEEEEEecC-CcEEEEEeCCC
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDA-VATGSDDATCRLFDLRADKEVACYKKD-SILFGATSVDFSVS-GRLLFAGYNDY  244 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~-~~~l~~g~~dg  244 (320)
                       +++..+.+|...|.+++|+|++.+ +++++.|+.+++||..+.+........ .....+.+++|+|+ +.++++|+.|+
T Consensus       150 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~  228 (325)
T d1pgua1         150 -NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR  228 (325)
T ss_dssp             -CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC
T ss_pred             -ccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccccc
Confidence             445556778899999999999875 678999999999999877655444322 22234678999997 68999999999


Q ss_pred             eEEEEcCCCCeEEEEeecCCCceeEEEEC---cCCCeEEEecCCCceEeeecch
Q psy14961        245 TINVWDSLKCCRVNHLMGHENRVSCLQVS---PDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       245 ~v~~wd~~~~~~~~~~~~h~~~i~~i~~s---~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .|++||..+++.+.++.+|..++.++.|+   |||++|+++|.|++||+|+.+.
T Consensus       229 ~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~  282 (325)
T d1pgua1         229 KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT  282 (325)
T ss_dssp             CEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTT
T ss_pred             ceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCC
Confidence            99999999999999999999888777776   7899999999999999999653

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.2e-30  Score=229.74  Aligned_cols=268  Identities=17%  Similarity=0.167  Sum_probs=181.7

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc--ccccccccCe------EEEEecC-CCCEEEEEeCC
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK--KTVATHTSFI------SCCIFPN-SDQQILTGSGD   86 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~--~~~~~h~~~v------~~~~~~~-~~~~l~s~~~d   86 (320)
                      ..|...|.++++++  ++|+|||.|+.|++||....+......  .....|...+      ..+.... +...+++++.|
T Consensus        11 ~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d   88 (393)
T d1sq9a_          11 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS   88 (393)
T ss_dssp             SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred             CcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCC
Confidence            46888999999875  589999999999999975433221111  1112233222      1222221 22457789999


Q ss_pred             CeEEEEECCCcceee----------ecccCccceeEEEEeeCC---CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         87 CTCALWDVESSQLLQ----------SFHGHTGELMDLDLAPSE---TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        87 g~v~iwd~~~~~~~~----------~~~~~~~~v~~~~~~~~~---~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                      |.|++|++.......          ....+...+..+++.+..   .+..+++++.||.+++||+........    ...
T Consensus        89 g~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~----~~~  164 (393)
T d1sq9a_          89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN----SLT  164 (393)
T ss_dssp             SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH----HTT
T ss_pred             CcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccc----eee
Confidence            999999875432111          112234556666665542   356889999999999999754211000    000


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc----eeeeEEEE
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI----LFGATSVD  229 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~  229 (320)
                      ........+.     ........+...+.+++|+|++ +||+|+.||+|++||+.+++.+..+.....    ...+.+++
T Consensus       165 ~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~  238 (393)
T d1sq9a_         165 LNWSPTLELQ-----GTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK  238 (393)
T ss_dssp             TCCCCEEEEE-----EEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred             eeeccceecc-----cceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcc
Confidence            0011111111     1122233455678899999997 899999999999999999887766553321    12478899


Q ss_pred             EecCCcEEEEEeCCC---eEEEEcCCCCeEEEEe-------------ecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        230 FSVSGRLLFAGYNDY---TINVWDSLKCCRVNHL-------------MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       230 ~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~-------------~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      |+|+|++|++|+.|+   .|++||+.++..+..+             .+|.+.|++|+|+||+++|+|||.|++||+||.
T Consensus       239 ~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~  318 (393)
T d1sq9a_         239 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV  318 (393)
T ss_dssp             ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred             cccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEEC
Confidence            999999999999886   5999999887776655             389999999999999999999999999999996


Q ss_pred             ch
Q psy14961        294 KN  295 (320)
Q Consensus       294 ~~  295 (320)
                      +.
T Consensus       319 ~~  320 (393)
T d1sq9a_         319 KT  320 (393)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=4.2e-29  Score=219.83  Aligned_cols=231  Identities=19%  Similarity=0.251  Sum_probs=168.9

Q ss_pred             CCCEEEEecCCCeEEEEEecccCCccccc------ccccccccCeEEEEecCC-----CCEEEEEeCCCeEEEEECCCcc
Q psy14961         30 SGSVVASGGLDNKVTVYAIALEDDSSAKK------KTVATHTSFISCCIFPNS-----DQQILTGSGDCTCALWDVESSQ   98 (320)
Q Consensus        30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~------~~~~~h~~~v~~~~~~~~-----~~~l~s~~~dg~v~iwd~~~~~   98 (320)
                      ++.++++++.||.+++|++...+......      .....+...+..+.+..+     +.++++++.||++++|++....
T Consensus        78 ~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~  157 (393)
T d1sq9a_          78 ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA  157 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred             CCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCC
Confidence            44578899999999999986433221110      111234455666666443     3578899999999999974321


Q ss_pred             ------------------eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961         99 ------------------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV  160 (320)
Q Consensus        99 ------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i  160 (320)
                                        .......+...+.++++.  +++ +|++|+.|+.|++||+.+++.+..++.           
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s--~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~-----------  223 (393)
T d1sq9a_         158 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS--ERG-LIATGFNNGTVQISELSTLRPLYNFES-----------  223 (393)
T ss_dssp             SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC--TTS-EEEEECTTSEEEEEETTTTEEEEEEEC-----------
T ss_pred             cccceeeeeeccceecccceecccCCCCcEEEEEEC--CCC-EEEEEeCCCcEEEEeeccccccccccc-----------
Confidence                              011112344556677664  455 899999999999999998877655432           


Q ss_pred             EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---eEEEEECCCCeeEeEEecCc-----------ceeeeE
Q psy14961        161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA---TCRLFDLRADKEVACYKKDS-----------ILFGAT  226 (320)
Q Consensus       161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~-----------~~~~~~  226 (320)
                                ...+.+|..+|++++|+|+|++|++|+.|+   .|++||+.+++.+.......           ..-.+.
T Consensus       224 ----------~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~  293 (393)
T d1sq9a_         224 ----------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVM  293 (393)
T ss_dssp             ----------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEE
T ss_pred             ----------ccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCcee
Confidence                      233567999999999999999999999987   49999999887765543210           112368


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCcee----EEEECcCCCeEEEecC
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS----CLQVSPDGTAFSSGSW  284 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~----~i~~s~~~~~l~s~s~  284 (320)
                      +++|+|++++|++|+.|++|++||+.+++++.++.+|.+.|.    .++|+|++..+++++.
T Consensus       294 ~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~  355 (393)
T d1sq9a_         294 SLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV  355 (393)
T ss_dssp             EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE
T ss_pred             eeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEccc
Confidence            899999999999999999999999999999999999988775    5889999988877663

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-28  Score=207.38  Aligned_cols=226  Identities=27%  Similarity=0.530  Sum_probs=175.7

Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ....+.+|...|.++ ++.++++|++|+.||+|++||+.+++++..+.+|...|.++++.+    +.|++++.|+.+++|
T Consensus         8 ~~~~l~GH~~~V~s~-~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~----~~l~s~s~D~~~~~~   82 (342)
T d2ovrb2           8 SPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD----NIIISGSTDRTLKVW   82 (342)
T ss_dssp             CCEEEECSTTSCEEE-EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET----TEEEEEETTSCEEEE
T ss_pred             cCEEECCcCCceEEE-EEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCC----Cccccceeccccccc
Confidence            345688999887542 344688999999999999999999999999999999999988753    499999999999999


Q ss_pred             eCCCCcEEEEeccCC-----------------------------------------------------ccccCCCeEEEE
Q psy14961        137 DMRTGYCVQSFEGHH-----------------------------------------------------NLITDDKLVNIW  163 (320)
Q Consensus       137 d~~~~~~~~~~~~~~-----------------------------------------------------~~~~~d~~i~iw  163 (320)
                      +..............                                                     .....++.+++|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  162 (342)
T d2ovrb2          83 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW  162 (342)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEE
T ss_pred             ccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEe
Confidence            987643321111000                                                     001247889999


Q ss_pred             ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      |.+...++..+.+|...+..+.+  ++.++++++.||.|++||++.++.+..+..+...  +.+  +++++.+|++|+.|
T Consensus       163 d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~--v~~--~~~~~~~l~s~s~d  236 (342)
T d2ovrb2         163 DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL--TSG--MELKDNILVSGNAD  236 (342)
T ss_dssp             EGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC--EEE--EEEETTEEEEEETT
T ss_pred             ecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccc--eeE--EecCCCEEEEEcCC
Confidence            99999999999999877765554  5789999999999999999998877665544322  233  45567899999999


Q ss_pred             CeEEEEcCCCCeEEEEeec---CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        244 YTINVWDSLKCCRVNHLMG---HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       244 g~v~~wd~~~~~~~~~~~~---h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      +.|++||.........+.+   |...+.++++++  ++|++|+.|++||+|+.++
T Consensus       237 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~s~Dg~i~iwd~~t  289 (342)
T d2ovrb2         237 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKT  289 (342)
T ss_dssp             SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTT
T ss_pred             CEEEEEecccccccccccccceeeeceeecccCC--CeeEEEcCCCEEEEEECCC
Confidence            9999999888777666654   556777777654  6999999999999999743

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-26  Score=193.09  Aligned_cols=223  Identities=26%  Similarity=0.462  Sum_probs=179.5

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM  138 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~  138 (320)
                      .....|...|+|+.|  ++++|++|+.||+|++||+++++++..+++|.+.|.++++    ++++|++|+.|+.|++|++
T Consensus         9 ~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~----~~~~l~s~s~D~~i~~~~~   82 (293)
T d1p22a2           9 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDV   82 (293)
T ss_dssp             ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC----CSSEEEEEETTSCEEEEES
T ss_pred             eccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec----ccceeeccccccccccccc
Confidence            344567788998866  6889999999999999999999999999999999987754    4679999999999999999


Q ss_pred             CCCcEEEEeccCCc-------------cccCCCeEEEEECcCCe---eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961        139 RTGYCVQSFEGHHN-------------LITDDKLVNIWDMRTGY---CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC  202 (320)
Q Consensus       139 ~~~~~~~~~~~~~~-------------~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i  202 (320)
                      ..+...........             ....++.+.+|+.....   ....+..|...|..+.+.+  ..+++++.|+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i  160 (293)
T d1p22a2          83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI  160 (293)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETTSEE
T ss_pred             ccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccccCCCce
Confidence            98876554432221             12457889999987654   3445677888898888775  578899999999


Q ss_pred             EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEe
Q psy14961        203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~  282 (320)
                      ++||+++++.+..+.....  .+.  .+++++.++++|+.||.|++||..+...+..+.+|...|..  +++++.+|++|
T Consensus       161 ~~~d~~~~~~~~~~~~~~~--~v~--~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~sg  234 (293)
T d1p22a2         161 KVWNTSTCEFVRTLNGHKR--GIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSG  234 (293)
T ss_dssp             EEEETTTCCEEEEEECCSS--CEE--EEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSSEEEEE
T ss_pred             eeecCCCCcEEEEEccccc--ccc--cccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeee--ccccceEEEEE
Confidence            9999999887766654432  122  34556789999999999999999999999888899988875  45678899999


Q ss_pred             cCCCceEeeecch
Q psy14961        283 SWDTTLRDEESKN  295 (320)
Q Consensus       283 s~D~~ir~~~~~~  295 (320)
                      +.|++|++|+...
T Consensus       235 ~~dg~i~iwd~~~  247 (293)
T d1p22a2         235 AYDGKIKVWDLVA  247 (293)
T ss_dssp             ETTSCEEEEEHHH
T ss_pred             cCCCEEEEEECCC
Confidence            9999999999644

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.5e-27  Score=203.09  Aligned_cols=237  Identities=11%  Similarity=0.041  Sum_probs=170.9

Q ss_pred             ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce---eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEE
Q psy14961         59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL---LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNI  135 (320)
Q Consensus        59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~l  135 (320)
                      ....+|+..|+++.|+|++++|++|+.||+|+|||++++..   +.....|..+|.+++|.+. ++..|++|+.|+.|++
T Consensus         5 ~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~-~~~~l~sg~~d~~v~~   83 (342)
T d1yfqa_           5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILK   83 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEE
T ss_pred             EcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCC-CCCEEEEcccccceee
Confidence            34568999999999999999999999999999999876543   2233468999999999875 3568999999999999


Q ss_pred             EeCCCCcEEEEeccCCc----------------cccCCCeEEEEECcCCeee----eeecCC--CCCeEEEEEcCCCCEE
Q psy14961        136 WDMRTGYCVQSFEGHHN----------------LITDDKLVNIWDMRTGYCV----QSFEGH--QSDVNSVKFHPSGDAV  193 (320)
Q Consensus       136 wd~~~~~~~~~~~~~~~----------------~~~~d~~i~iwd~~~~~~~----~~~~~~--~~~v~~v~~~p~g~~l  193 (320)
                      |++..+........+..                ....++.+++||++.....    .....+  ........+.+.+..+
T Consensus        84 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (342)
T d1yfqa_          84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred             eecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCce
Confidence            99987654443322211                1246889999998754322    222222  2344567778888999


Q ss_pred             EEeeCCCeEEEEECCCCeeEeEEec-CcceeeeEE-EEEecCCcEEEEEeCCCeEEEEcCCCCeE---------E-----
Q psy14961        194 ATGSDDATCRLFDLRADKEVACYKK-DSILFGATS-VDFSVSGRLLFAGYNDYTINVWDSLKCCR---------V-----  257 (320)
Q Consensus       194 ~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~-~~~s~~~~~l~~g~~dg~v~~wd~~~~~~---------~-----  257 (320)
                      ++++.|+.+++||++..+....... ......... ..++.++..+++++.+|.+.+|+......         .     
T Consensus       164 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T d1yfqa_         164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL  243 (342)
T ss_dssp             EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred             eeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeee
Confidence            9999999999999976553322111 111111223 33456778999999999999997543211         1     


Q ss_pred             -EEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        258 -NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       258 -~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                       ....+|...|++|+|+|++++|||||.||+|++||..+.
T Consensus       244 ~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~  283 (342)
T d1yfqa_         244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR  283 (342)
T ss_dssp             CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred             ccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCC
Confidence             112356778999999999999999999999999997654

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.95  E-value=3.5e-27  Score=203.49  Aligned_cols=265  Identities=9%  Similarity=-0.053  Sum_probs=188.9

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCC--eEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDN--KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ   78 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg--~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (320)
                      |++||..+++... + .|...|.+++|+|||++|++++.+.  .+++||...     .....+..|...+.++.|+++++
T Consensus        26 v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~-----~~~~~~~~~~~~v~~~~~spdg~   98 (360)
T d1k32a3          26 AFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-----GKAEKFEENLGNVFAMGVDRNGK   98 (360)
T ss_dssp             EEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-----CCEEECCCCCCSEEEEEECTTSS
T ss_pred             EEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC-----CcEEEeeCCCceEEeeeeccccc
Confidence            4799998776553 3 4788999999999999998876554  789998753     22335668899999999999999


Q ss_pred             EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      +|++++.++.+++|++++++....+..|...+.+++++  ++|+.|+.+..+...                 ......++
T Consensus        99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--pdg~~la~~~~~~~~-----------------~~~~~~~~  159 (360)
T d1k32a3          99 FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS--DNSRFIAYGFPLKHG-----------------ETDGYVMQ  159 (360)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC--TTSCEEEEEEEECSS-----------------TTCSCCEE
T ss_pred             ccceeccccccccccccccceeeeeecccccccchhhc--cceeeeeeecccccc-----------------ceeecccc
Confidence            99999999999999999999888888888888888774  568888865433211                 00112344


Q ss_pred             eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE-------eEEecC------------
Q psy14961        159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV-------ACYKKD------------  219 (320)
Q Consensus       159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~-------~~~~~~------------  219 (320)
                      .+++||+.+++.... ..|...+.+++|+|+|+.|++++.++.+.+||.......       ......            
T Consensus       160 ~~~v~d~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  238 (360)
T d1k32a3         160 AIHVYDMEGRKIFAA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR  238 (360)
T ss_dssp             EEEEEETTTTEEEEC-SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCG
T ss_pred             ceeeeccccCceeee-cccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCC
Confidence            566777766654433 346667888999999999999999999999986432211       000000            


Q ss_pred             ------------c---cee-------eeEEEEEecC-------------CcEEEEEeCCCeEEEEcCCCCeEEEEeecCC
Q psy14961        220 ------------S---ILF-------GATSVDFSVS-------------GRLLFAGYNDYTINVWDSLKCCRVNHLMGHE  264 (320)
Q Consensus       220 ------------~---~~~-------~~~~~~~s~~-------------~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~  264 (320)
                                  .   ...       ....+...++             +.++++++.++.+++||..+++.    ..|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~~~  314 (360)
T d1k32a3         239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVK  314 (360)
T ss_dssp             GGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE----EEEE
T ss_pred             cCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE----EEec
Confidence                        0   000       0112222222             22345566788999999877543    2345


Q ss_pred             CceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        265 NRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       265 ~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      +.|.+++|||||++|++++.||+|++|+.+..
T Consensus       315 ~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~  346 (360)
T d1k32a3         315 NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP  346 (360)
T ss_dssp             EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred             CCcCEEEECCCCCEEEEEECCCeEEEEECCCC
Confidence            56999999999999999999999999997654

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2e-26  Score=193.30  Aligned_cols=224  Identities=18%  Similarity=0.174  Sum_probs=169.4

Q ss_pred             ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961         57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW  136 (320)
Q Consensus        57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw  136 (320)
                      ...++.+|...|+++.|++    |++|+.||+|++||+.++.     ..|...|.++.+.+   +..+++++.|+.+++|
T Consensus         5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~---~~~~~s~s~D~~v~~w   72 (287)
T d1pgua2           5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSK---AQEYSSISWDDTLKVN   72 (287)
T ss_dssp             EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCS---TTCCEEEETTTEEEET
T ss_pred             eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecC---CCeEEEEeeccccccc
Confidence            4557889999999999975    9999999999999987643     46888898887643   4578999999999999


Q ss_pred             eCCCCc---EEEE--eccC--CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC-eEEEEECC
Q psy14961        137 DMRTGY---CVQS--FEGH--HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA-TCRLFDLR  208 (320)
Q Consensus       137 d~~~~~---~~~~--~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg-~i~iwd~~  208 (320)
                      ++...+   ....  +...  ......++.+.+|+..++..+..+..+. .  ..+++|++..+++++.|+ .+++|++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~v~~~~~~~v~~~~~~  149 (287)
T d1pgua2          73 GITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS-P--GSAVSLSQNYVAVGLEEGNTIQVFKLS  149 (287)
T ss_dssp             TEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSS-C--EEEEEECSSEEEEEETTTSCEEEEETT
T ss_pred             cccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccc-e--eeeeeccCcceeeeccccceeeeeecc
Confidence            975422   1111  1111  1123456778899998888877766433 3  346677788888777764 79999987


Q ss_pred             CCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcC----------CC
Q psy14961        209 ADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPD----------GT  277 (320)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~----------~~  277 (320)
                      ..+....... .....+.+++|+|++.+|++|+.||.|++||..+..... .+.+|..+|.+++|+|+          +.
T Consensus       150 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~  228 (287)
T d1pgua2         150 DLEVSFDLKT-PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED  228 (287)
T ss_dssp             EEEEEEECSS-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred             ccceeeeeee-ccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCC
Confidence            6544332221 111246789999999999999999999999998877654 46789999999999875          46


Q ss_pred             eEEEecCCCceEeeecchH
Q psy14961        278 AFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       278 ~l~s~s~D~~ir~~~~~~~  296 (320)
                      +|+|||.|++|++|+.++.
T Consensus       229 ~l~sgs~D~~i~iw~~~~~  247 (287)
T d1pgua2         229 LVATGSLDTNIFIYSVKRP  247 (287)
T ss_dssp             EEEEEETTSCEEEEESSCT
T ss_pred             eeEeecCCCeEEEEECCCC
Confidence            8999999999999997654

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=2.7e-23  Score=184.42  Aligned_cols=277  Identities=13%  Similarity=0.069  Sum_probs=192.6

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc-cccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS-AKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |.|||..+++.+..+..+ ..+.+++|+|||++|++++.|+.+++||+...+... ........|...+.+..|++++++
T Consensus        44 v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~  122 (426)
T d1hzua2          44 IALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRY  122 (426)
T ss_dssp             EEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred             EEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCE
Confidence            479999999999888766 568999999999999999999999999986443211 122233466777778888999998


Q ss_pred             EEEE-eCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961         80 ILTG-SGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK  158 (320)
Q Consensus        80 l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~  158 (320)
                      ++++ ..++.+++||..++.+...+..+...+....+.+... ...+.++.|+...++.....                +
T Consensus       123 l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~s~d~~~~~~~~~~~----------------~  185 (426)
T d1hzua2         123 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR-VAAIIASHEHPEFIVNVKET----------------G  185 (426)
T ss_dssp             EEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC-EEEEEECSSSSEEEEEETTT----------------T
T ss_pred             EEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCc-eeEEEECCCCCEEEEecCCC----------------C
Confidence            7555 4789999999999998888777776665555554322 24456666666555543322                2


Q ss_pred             eEEEEECcCCee-eeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-
Q psy14961        159 LVNIWDMRTGYC-VQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-  235 (320)
Q Consensus       159 ~i~iwd~~~~~~-~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-  235 (320)
                      .+.+++...... .....++...+..++|+|++++++++. .+..+.+++..+++.+................+.+.+. 
T Consensus       186 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (426)
T d1hzua2         186 KVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYG  265 (426)
T ss_dssp             EEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTE
T ss_pred             eEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCC
Confidence            233333333221 122234667789999999999886665 56779999999988776655432221122233333332 


Q ss_pred             EE--EEEeCCCeEEEEcCCC-------CeEEEEeecCCCceeEEEECcCCCeEE-------EecCCCceEeeecch
Q psy14961        236 LL--FAGYNDYTINVWDSLK-------CCRVNHLMGHENRVSCLQVSPDGTAFS-------SGSWDTTLRDEESKN  295 (320)
Q Consensus       236 ~l--~~g~~dg~v~~wd~~~-------~~~~~~~~~h~~~i~~i~~s~~~~~l~-------s~s~D~~ir~~~~~~  295 (320)
                      .+  +....++.+.+|+...       .+....+.+|...+..++|+||+++|+       +++.|++|++|+.++
T Consensus       266 ~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t  341 (426)
T d1hzua2         266 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN  341 (426)
T ss_dssp             EEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred             ceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCC
Confidence            22  2234577888887543       356778899999999999999999999       577899999999654

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.92  E-value=2.1e-24  Score=191.99  Aligned_cols=283  Identities=13%  Similarity=0.061  Sum_probs=180.2

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcc-cccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSS-AKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |.|||..+++.+..+..+ ..+..++|||||++|++++.|+.+++||+...+... ........|.+.+.+..|+++|++
T Consensus        44 v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~  122 (432)
T d1qksa2          44 IALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKY  122 (432)
T ss_dssp             EEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred             EEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCE
Confidence            469999999999888766 579999999999999999999999999986433221 122333456677777788999998


Q ss_pred             E-EEEeCCCeEEEEECCCcceeeecccCcccee---------EEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEE--E
Q psy14961         80 I-LTGSGDCTCALWDVESSQLLQSFHGHTGELM---------DLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQ--S  146 (320)
Q Consensus        80 l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~---------~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~--~  146 (320)
                      | ++++.+++|++||..+++++..+..+...+.         ...+..+++|..+ ++...++.|.+||..+++...  .
T Consensus       123 l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~  202 (432)
T d1qksa2         123 AIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE  202 (432)
T ss_dssp             EEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE
T ss_pred             EEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEE
Confidence            6 5777899999999999988776654332221         1122335566655 566677899999987765432  2


Q ss_pred             ec-----------cCCc--cc--cCCCeEEEEECcCCeeeeeecC-----CC----------------------------
Q psy14961        147 FE-----------GHHN--LI--TDDKLVNIWDMRTGYCVQSFEG-----HQ----------------------------  178 (320)
Q Consensus       147 ~~-----------~~~~--~~--~~d~~i~iwd~~~~~~~~~~~~-----~~----------------------------  178 (320)
                      +.           +...  .+  ..+..+.++|.++++.+..+..     |.                            
T Consensus       203 i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~  282 (432)
T d1qksa2         203 ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALI  282 (432)
T ss_dssp             EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEE
T ss_pred             EcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEec
Confidence            21           1110  00  1234566667666555433221     22                            


Q ss_pred             -----------CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961        179 -----------SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTIN  247 (320)
Q Consensus       179 -----------~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~  247 (320)
                                 ..+....++|++..+++++.+++.++|+..+...      +...  ..++++ ||++.|++++.|+.++
T Consensus       283 ~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~------~~~~--~~sv~v-pDg~~la~~s~d~~~k  353 (432)
T d1qksa2         283 GTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNP------EAEI--SGSVAV-FDIKAMTGDGSDPEFK  353 (432)
T ss_dssp             ECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCS------SHHH--HTCEEE-EEGGGCCCSSSCCCEE
T ss_pred             ccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCC------CCCe--eeEEEE-EechhhcccccCCceE
Confidence                       2233333444433344444444444443222110      0000  123443 8899999999999999


Q ss_pred             EEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEec-----CCCceEeeecchH
Q psy14961        248 VWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS-----WDTTLRDEESKNR  296 (320)
Q Consensus       248 ~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s-----~D~~ir~~~~~~~  296 (320)
                      +||..+..   .+..|...|.+++|||||++++.+.     .|+.|++||.++.
T Consensus       354 ~w~~~~~~---~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~  404 (432)
T d1qksa2         354 TLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  404 (432)
T ss_dssp             EECHHHHH---TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             eccccccc---ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCc
Confidence            99865432   2346777899999999999875554     4688999997554

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.92  E-value=2.9e-21  Score=161.89  Aligned_cols=254  Identities=15%  Similarity=0.181  Sum_probs=185.1

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      |.+||..+++....+... .....++|+|||++|+ +++.++.|++||+...    .....+..+. ....+.+.+++..
T Consensus        14 v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~----~~~~~~~~~~-~~~~~~~~~~~~~   87 (301)
T d1l0qa2          14 ISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN----NVIATVPAGS-SPQGVAVSPDGKQ   87 (301)
T ss_dssp             EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT----EEEEEEECSS-SEEEEEECTTSSE
T ss_pred             EEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC----ceeeeeeccc-ccccccccccccc
Confidence            469999999988877765 4468899999999874 6778899999998532    2233444444 3567888888876


Q ss_pred             EE-EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961         80 IL-TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD  157 (320)
Q Consensus        80 l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d  157 (320)
                      ++ ++..++.+.+|+..+++....+..+ .....+.+  ++++..++ ++..++.+.+|+..++..+..+.         
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  155 (301)
T d1l0qa2          88 VYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLAL--SPDGKKLYVTNNGDKTVSVINTVTKAVINTVS---------  155 (301)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---------
T ss_pred             ccccccccceeeecccccceeeeecccc-ccceEEEe--ecCCCeeeeeeccccceeeeeccccceeeecc---------
Confidence            65 4556789999999998887777644 34455555  45677665 55567788888887765443321         


Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL  236 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  236 (320)
                                         +...+..++++|++..+++++. ++.+.+|+....+.........   .+..+.|++++..
T Consensus       156 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~  213 (301)
T d1l0qa2         156 -------------------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTK  213 (301)
T ss_dssp             -------------------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSE
T ss_pred             -------------------cCCCceEEEeeccccceeeecccccccccccccceeeeecccccC---Ccceeeccccccc
Confidence                               2234678999999998877665 4677788877766555444332   2467889999998


Q ss_pred             EEEEe---CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeE-EEecCCCceEeeecch
Q psy14961        237 LFAGY---NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF-SSGSWDTTLRDEESKN  295 (320)
Q Consensus       237 l~~g~---~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l-~s~s~D~~ir~~~~~~  295 (320)
                      ++++.   .++.|.+||..+.+.+..+.. ...+.+++|+|||++| ++++.|++|++||.++
T Consensus       214 ~~v~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t  275 (301)
T d1l0qa2         214 AYVTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT  275 (301)
T ss_dssp             EEEEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             cccccccceeeeeeeeecCCCeEEEEEcC-CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence            87664   346899999999888776654 4467999999999976 7888999999999654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.89  E-value=1.1e-20  Score=160.51  Aligned_cols=247  Identities=13%  Similarity=0.121  Sum_probs=183.5

Q ss_pred             CeEeecccceeEEEEEeCc--cceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccc-----cccCeEEEE
Q psy14961          1 MIIWDGLTQTKEHSVTMPA--TWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVAT-----HTSFISCCI   72 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~--~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-----h~~~v~~~~   72 (320)
                      |.|||..+.+....+..+.  ..+.+++|+|||+++ ++++.++.|.+||+...+.    ...+..     +...+..+.
T Consensus        13 v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~----~~~~~~~~~~~~~~~~~~v~   88 (337)
T d1pbyb_          13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET----LGRIDLSTPEERVKSLFGAA   88 (337)
T ss_dssp             EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE----EEEEECCBTTEEEECTTCEE
T ss_pred             EEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcE----EEEEecCCCcccccceeeEE
Confidence            4799999999888777643  457899999999987 5667899999999864221    112222     223345678


Q ss_pred             ecCCCCEEEEEe------------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961         73 FPNSDQQILTGS------------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT  140 (320)
Q Consensus        73 ~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~  140 (320)
                      ++++++.++++.            .+..+.+||..+++.+..+.. ...+..+++  +++|+++++++.+  +.+||..+
T Consensus        89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~--s~dg~~l~~~~~~--~~~~d~~~  163 (337)
T d1pbyb_          89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAW--ARDGSKLYGLGRD--LHVMDPEA  163 (337)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEE--CTTSSCEEEESSS--EEEEETTT
T ss_pred             EcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEE--cCCCCEEEEEcCC--cceeeeec
Confidence            999999888775            467889999999888777764 345666666  5678899988754  67899998


Q ss_pred             CcEEEEeccCCcc--------------------------------------ccCCCeEEEEECcCCeeee-eecCCCCCe
Q psy14961        141 GYCVQSFEGHHNL--------------------------------------ITDDKLVNIWDMRTGYCVQ-SFEGHQSDV  181 (320)
Q Consensus       141 ~~~~~~~~~~~~~--------------------------------------~~~d~~i~iwd~~~~~~~~-~~~~~~~~v  181 (320)
                      ++....+..+...                                      ...+..+.+||..++.... .+..+...+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (337)
T d1pbyb_         164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY  243 (337)
T ss_dssp             TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred             CcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcce
Confidence            8776655322110                                      0113457888888876544 345577788


Q ss_pred             EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      ..++++|++.+++.+  ++.+++||+.+++.+.......   .+.+++|+|||++|++|+.+++|.+||..+.+.+.++.
T Consensus       244 ~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~---~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         244 FSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             EEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             EEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCCC---CEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            899999999988766  5899999999998877665443   24678999999999999999999999999988887775

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=1.1e-20  Score=160.56  Aligned_cols=252  Identities=15%  Similarity=0.080  Sum_probs=156.6

Q ss_pred             CEEEEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCEEE-EEeCCCeEEEEECCCcceeeecccCcc
Q psy14961         32 SVVASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGHTG  108 (320)
Q Consensus        32 ~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~  108 (320)
                      +|+++++.|+.|++||+...    .....+.  .+...+..+.|++++++++ +++.++.|.+||+.+++.+..+..+..
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~----~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~   77 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKM----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTT----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred             eEEEEEcCCCEEEEEECCCC----eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCC
Confidence            48999999999999998532    2233333  3345567899999999875 566799999999999998877765433


Q ss_pred             c-----eeEEEEeeCCCCCEEEEEeC------------CCeEEEEeCCCCcEEEEeccCCc----cc--------cCCCe
Q psy14961        109 E-----LMDLDLAPSETGNTFVSGSS------------DKLVNIWDMRTGYCVQSFEGHHN----LI--------TDDKL  159 (320)
Q Consensus       109 ~-----v~~~~~~~~~~~~~l~s~~~------------dg~i~lwd~~~~~~~~~~~~~~~----~~--------~~d~~  159 (320)
                      .     ...+++  +++++.+++++.            +..+.+||..++.....+.....    .+        ...+.
T Consensus        78 ~~~~~~~~~v~~--s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~  155 (337)
T d1pbyb_          78 EERVKSLFGAAL--SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD  155 (337)
T ss_dssp             TEEEECTTCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS
T ss_pred             cccccceeeEEE--cCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC
Confidence            2     234445  567888887764            44556666666555444332211    01        11233


Q ss_pred             EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCE------------------------EEEeeCCCeEEEEECCCCeeEeE
Q psy14961        160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDA------------------------VATGSDDATCRLFDLRADKEVAC  215 (320)
Q Consensus       160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~------------------------l~s~s~dg~i~iwd~~~~~~~~~  215 (320)
                      +.+||..+++....+..+.... ...+.|++..                        ...++.++.+.+||...+.....
T Consensus       156 ~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (337)
T d1pbyb_         156 LHVMDPEAGTLVEDKPIQSWEA-ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR  234 (337)
T ss_dssp             EEEEETTTTEEEEEECSTTTTT-TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred             cceeeeecCcEEEEeecCCccc-cceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEE
Confidence            4555665555555554432210 1111111110                        11112223355555544432221


Q ss_pred             -EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961        216 -YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK  294 (320)
Q Consensus       216 -~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~  294 (320)
                       +....  .....+.++|++.+++.+  ++.+++||..+...+..+ .+...+.+++|+|||++|++++.|++|++||.+
T Consensus       235 ~~~~~~--~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~-~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~  309 (337)
T d1pbyb_         235 EVRIMD--VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE  309 (337)
T ss_dssp             EEEECS--SCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred             EecCCC--cceEEEEecccceEEEEc--cccEEEEECCCCcEEEEE-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence             11111  123456678888888766  478999999998888765 466778999999999999999999999999975


Q ss_pred             h
Q psy14961        295 N  295 (320)
Q Consensus       295 ~  295 (320)
                      +
T Consensus       310 t  310 (337)
T d1pbyb_         310 T  310 (337)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=4.4e-21  Score=163.72  Aligned_cols=261  Identities=10%  Similarity=-0.006  Sum_probs=174.4

Q ss_pred             EEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEE-EeCCCeEEEEECCCcceeee
Q psy14961         25 CAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILT-GSGDCTCALWDVESSQLLQS  102 (320)
Q Consensus        25 ~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~~  102 (320)
                      ++|++++++|++++.++.|.+||+...    ....++. .|.....++.|+++++++++ +..++.|++||+.+++.+..
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~----~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~   77 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASD----TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH   77 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTT----EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCC----CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeee
Confidence            468999999999999999999998532    2233333 34556778999999998755 55789999999999987765


Q ss_pred             cccCcc------ceeEEEEeeCCCCCEEEEEe------------CCCeEEEEeCCCCcEEEEec----cC----------
Q psy14961        103 FHGHTG------ELMDLDLAPSETGNTFVSGS------------SDKLVNIWDMRTGYCVQSFE----GH----------  150 (320)
Q Consensus       103 ~~~~~~------~v~~~~~~~~~~~~~l~s~~------------~dg~i~lwd~~~~~~~~~~~----~~----------  150 (320)
                      +.....      .+..+++  +++|+.+++++            .+..+.+||..+++....+.    +.          
T Consensus        78 ~~~~~~~~~~~~~~~~v~~--s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (346)
T d1jmxb_          78 ANLSSVPGEVGRSMYSFAI--SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD  155 (346)
T ss_dssp             EESCCSTTEEEECSSCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred             ecccccccccCCceEEEEE--ecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC
Confidence            543221      2333444  66888887765            46778899887654322111    11          


Q ss_pred             CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCE--------------------------EEEeeCCCeEEE
Q psy14961        151 HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDA--------------------------VATGSDDATCRL  204 (320)
Q Consensus       151 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~--------------------------l~s~s~dg~i~i  204 (320)
                      ......+..+.+|+..+++.+..+..+.. ...+.++|++..                          ++++..++.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
T d1jmxb_         156 GSLYVAGPDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS  234 (346)
T ss_dssp             SCEEEESSSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred             CEEEEeCCcceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEE
Confidence            11111234567888888877766654322 223334444332                          333444556777


Q ss_pred             EECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961        205 FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       205 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                      ||+.++........... .....+.+++++.+++.+. ++.|.+||..+++.+..+. +...+.+++|||||++|++++.
T Consensus       235 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~  311 (346)
T d1jmxb_         235 VDLKTGKTHTQEFADLT-ELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGT  311 (346)
T ss_dssp             EETTTCCEEEEEEEECS-SCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESB
T ss_pred             EECCCCceEEEEeeccc-ceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeC
Confidence            77776654432211111 1235677888888777765 4579999999988877654 4567999999999999999999


Q ss_pred             CCceEeeecch
Q psy14961        285 DTTLRDEESKN  295 (320)
Q Consensus       285 D~~ir~~~~~~  295 (320)
                      |+.|++||.+.
T Consensus       312 d~~v~v~D~~t  322 (346)
T d1jmxb_         312 FNDLAVFNPDT  322 (346)
T ss_dssp             SSEEEEEETTT
T ss_pred             CCcEEEEECcc
Confidence            99999999853

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.87  E-value=6e-21  Score=163.92  Aligned_cols=190  Identities=15%  Similarity=0.120  Sum_probs=150.5

Q ss_pred             EEEecC-CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEE
Q psy14961         70 CCIFPN-SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQS  146 (320)
Q Consensus        70 ~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~  146 (320)
                      .-.|+| +|+++++++ +|.|++||++++..++.  .|...|.+++|  +|+|+.|++++.+.  .|++||..+++.   
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~--~~~~~v~~~~~--spDg~~l~~~~~~~g~~v~v~d~~~~~~---   78 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--PEPLRIRYVRR--GGDTKVAFIHGTREGDFLGIYDYRTGKA---   78 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC--SCCSCEEEEEE--CSSSEEEEEEEETTEEEEEEEETTTCCE---
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEEc--cCCCCEEEEEE--CCCCCEEEEEEcCCCCEEEEEECCCCcE---
Confidence            356887 888888876 57999999988877653  58889988877  45788888766553  678888776542   


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                                               ..+..|...|.+++|+|+|++|++++.++.+++|++.+++.......+..  ...
T Consensus        79 -------------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  131 (360)
T d1k32a3          79 -------------------------EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA--MIT  131 (360)
T ss_dssp             -------------------------EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS--CCC
T ss_pred             -------------------------EEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccc--ccc
Confidence                                     23456888999999999999999999999999999998877665544432  346


Q ss_pred             EEEEecCCcEEEEEe----------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        227 SVDFSVSGRLLFAGY----------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~----------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      .++|+|+|++|+.+.          .++.+++||....... .+..|...+..++|+|||++|++++.|+.+++|+...
T Consensus       132 ~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~  209 (360)
T d1k32a3         132 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF-AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV  209 (360)
T ss_dssp             CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE-ECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred             chhhccceeeeeeeccccccceeeccccceeeeccccCcee-eecccccccccccccCCCCEEEEEeCCCceEcccccc
Confidence            788999999998654          3457999998876554 4556778889999999999999999999999998643

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.84  E-value=9.1e-19  Score=149.10  Aligned_cols=256  Identities=11%  Similarity=0.055  Sum_probs=176.5

Q ss_pred             CeEeecccceeEEEEEeC-ccceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCccccc--ccccccccCeEEEEecCC
Q psy14961          1 MIIWDGLTQTKEHSVTMP-ATWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKK--KTVATHTSFISCCIFPNS   76 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~-~~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~   76 (320)
                      |.+||+.+++....+..+ ...+.+++|+|||+++ ++++.++.|.+||+..........  .....+...+..+.|+++
T Consensus        20 v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~D   99 (346)
T d1jmxb_          20 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD   99 (346)
T ss_dssp             EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred             EEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecC
Confidence            469999999988877764 3457899999999987 556678999999985322111000  011112233456889999


Q ss_pred             CCEEEEEe------------CCCeEEEEECCCcceeeecccCc--cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961         77 DQQILTGS------------GDCTCALWDVESSQLLQSFHGHT--GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY  142 (320)
Q Consensus        77 ~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~  142 (320)
                      ++++++++            .+..+.+|+..+++....+..+.  ..+..+..  .+++..++ .+  +.+.+|++.+++
T Consensus       100 G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~--~~~~~~~~~~~~  174 (346)
T d1jmxb_         100 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA--ADDGSLYV-AG--PDIYKMDVKTGK  174 (346)
T ss_dssp             SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE--CTTSCEEE-ES--SSEEEECTTTCC
T ss_pred             CCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEe--cCCCEEEE-eC--CcceEEEccCCC
Confidence            99887765            47789999988876654443322  22332322  34454444 33  458899999888


Q ss_pred             EEEEeccCCcc-------------c---------------------------cCCCeEEEEECcCCeeee-eecCCCCCe
Q psy14961        143 CVQSFEGHHNL-------------I---------------------------TDDKLVNIWDMRTGYCVQ-SFEGHQSDV  181 (320)
Q Consensus       143 ~~~~~~~~~~~-------------~---------------------------~~d~~i~iwd~~~~~~~~-~~~~~~~~v  181 (320)
                      .+..+..+...             +                           ..+..+.+||..++.... ....|...+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (346)
T d1jmxb_         175 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY  254 (346)
T ss_dssp             EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred             EEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeeccccee
Confidence            77765432110             0                           012346778887765443 345677888


Q ss_pred             EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      .++.++|++.+++.+.. +.+.+||..+++.+.......   .+..++|+|||++|++|+.++.|++||..+.+.+.++.
T Consensus       255 ~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~---~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~  330 (346)
T d1jmxb_         255 FTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK  330 (346)
T ss_dssp             EEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCCC---CEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEE
Confidence            99999999888777664 579999999998776665433   35689999999999999999999999999999998887


Q ss_pred             cCCC
Q psy14961        262 GHEN  265 (320)
Q Consensus       262 ~h~~  265 (320)
                      -+.+
T Consensus       331 ~p~g  334 (346)
T d1jmxb_         331 LPGG  334 (346)
T ss_dssp             CSSS
T ss_pred             CCCC
Confidence            5443

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=1.8e-19  Score=159.47  Aligned_cols=268  Identities=10%  Similarity=0.041  Sum_probs=174.5

Q ss_pred             CeEeecccceeEEEE-----EeCccceEEEEEcCCCCEEEE-ecCCCeEEEEEecccCCcccccccccc-----------
Q psy14961          1 MIIWDGLTQTKEHSV-----TMPATWVMACAYAPSGSVVAS-GGLDNKVTVYAIALEDDSSAKKKTVAT-----------   63 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~-----~~~~~~V~~~~~~~~~~~l~s-~~~dg~i~v~~~~~~~~~~~~~~~~~~-----------   63 (320)
                      +.+||..+.+.....     ..|...+.+++|+|||++|++ +..++.+++||.....    ....+..           
T Consensus        85 v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~----~~~~~~~~~~~~~~~~~~  160 (426)
T d1hzua2          85 IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE----PKQIVSTRGMTVDTQTYH  160 (426)
T ss_dssp             EEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC----EEEEEECCEECSSSCCEE
T ss_pred             EEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccc----eeEEeeccCCCccceeec
Confidence            469999887643322     245567778889999998755 4578999999975321    1112222           


Q ss_pred             cccCeEEEEecCCCCEEEEEeC-CCeEEEEECCCccee-eecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCC
Q psy14961         64 HTSFISCCIFPNSDQQILTGSG-DCTCALWDVESSQLL-QSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRT  140 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~  140 (320)
                      +......+..++++..++.... .+.+.+++......+ .....+...+..+.+  ++++++++++. .+..+.+++..+
T Consensus       161 ~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~a~~~~~~~~~~~~~~  238 (426)
T d1hzua2         161 PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGW--DSSHRYFMTAANNSNKVAVIDSKD  238 (426)
T ss_dssp             SCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEE--CTTSCEEEEEETTCSEEEEEETTT
T ss_pred             CCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeE--CCCCcEEEeeeecccceeeeeccc
Confidence            2233344555555555554443 355555555443322 122234555666655  55678777665 456788999998


Q ss_pred             CcEEEEeccCCc---------------c-----ccCCCeEEEEECcC-------CeeeeeecCCCCCeEEEEEcCCCCEE
Q psy14961        141 GYCVQSFEGHHN---------------L-----ITDDKLVNIWDMRT-------GYCVQSFEGHQSDVNSVKFHPSGDAV  193 (320)
Q Consensus       141 ~~~~~~~~~~~~---------------~-----~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~v~~~p~g~~l  193 (320)
                      ++.+........               .     ...++.+.+|+...       .+....+++|...+..++|+|+|++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l  318 (426)
T d1hzua2         239 RRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHL  318 (426)
T ss_dssp             TEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEE
T ss_pred             ccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceE
Confidence            887665432110               0     12477888887644       36777889999999999999999999


Q ss_pred             EE-------eeCCCeEEEEECCCCeeEeEEecC-------cceeeeEEEEEecCCcEEEEE-----eCCCeEEEEcCCCC
Q psy14961        194 AT-------GSDDATCRLFDLRADKEVACYKKD-------SILFGATSVDFSVSGRLLFAG-----YNDYTINVWDSLKC  254 (320)
Q Consensus       194 ~s-------~s~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~s~~~~~l~~g-----~~dg~v~~wd~~~~  254 (320)
                      ++       ++.|++|++||+.+++........       .....+..++|||||++++.+     +.++.|++||..+.
T Consensus       319 ~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~  398 (426)
T d1hzua2         319 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL  398 (426)
T ss_dssp             EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTT
T ss_pred             EEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCC
Confidence            84       556889999999887654433211       111225678999999977443     35889999999999


Q ss_pred             eEEEEeecCCCceeEEEECcCCCeEE
Q psy14961        255 CRVNHLMGHENRVSCLQVSPDGTAFS  280 (320)
Q Consensus       255 ~~~~~~~~h~~~i~~i~~s~~~~~l~  280 (320)
                      +....+.++.      .++|+|++-+
T Consensus       399 k~~~~i~~~~------~~tp~Gk~~~  418 (426)
T d1hzua2         399 KLKAVVKDPR------LITPTGKFNV  418 (426)
T ss_dssp             EEEEEECCTT------CCSEEEEEEH
T ss_pred             eEEEEECCCC------ccCCCceEeE
Confidence            8888777765      3468887743

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.84  E-value=1.3e-18  Score=154.08  Aligned_cols=262  Identities=9%  Similarity=-0.030  Sum_probs=165.8

Q ss_pred             cCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee--eeccc
Q psy14961         28 APSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL--QSFHG  105 (320)
Q Consensus        28 ~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--~~~~~  105 (320)
                      +++.-++++.+.+|+|.+||...    ......+..+ ..+..+.|+|+|++++++++|+++++||+.+++..  ..++.
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t----~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~  103 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGST----YEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI  103 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTT----CCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred             CCCcEEEEEEcCCCEEEEEECCC----CcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEec
Confidence            34444568999999999999753    2334455555 35889999999999999999999999999876532  22221


Q ss_pred             CccceeEEEEe--eCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCcc---------------------------cc
Q psy14961        106 HTGELMDLDLA--PSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNL---------------------------IT  155 (320)
Q Consensus       106 ~~~~v~~~~~~--~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~---------------------------~~  155 (320)
                       ...-..+.++  .++||++| ++++.++.+++||..+++++..+..+...                           ..
T Consensus       104 -~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~  182 (432)
T d1qksa2         104 -GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK  182 (432)
T ss_dssp             -CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred             -CCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEc
Confidence             1112233333  36789976 67888999999999999887665432211                           12


Q ss_pred             CCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCcc---eeeeEEEEE
Q psy14961        156 DDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDSI---LFGATSVDF  230 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~  230 (320)
                      +++.+.+||..+.+...... .+...+..++|+|+|+++++++. ++.+.++|....+..........   .........
T Consensus       183 ~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~  262 (432)
T d1qksa2         183 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH  262 (432)
T ss_dssp             TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE
T ss_pred             cCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceec
Confidence            45678888887765433222 34556889999999998776664 66899999988776655432211   011122222


Q ss_pred             ecCCcEEEEEe-CCCeEEEEcCCCC-------eEEEE-------------------------eecCCCceeEEEECcCCC
Q psy14961        231 SVSGRLLFAGY-NDYTINVWDSLKC-------CRVNH-------------------------LMGHENRVSCLQVSPDGT  277 (320)
Q Consensus       231 s~~~~~l~~g~-~dg~v~~wd~~~~-------~~~~~-------------------------~~~h~~~i~~i~~s~~~~  277 (320)
                      ...+...++.. .++.|.+|+....       .....                         +.+|......+++ ||++
T Consensus       263 ~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~  341 (432)
T d1qksa2         263 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIK  341 (432)
T ss_dssp             TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGG
T ss_pred             CCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE-Eech
Confidence            22333333332 2556666654321       11111                         1122222334555 8888


Q ss_pred             eEEEecCCCceEeeecchH
Q psy14961        278 AFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       278 ~l~s~s~D~~ir~~~~~~~  296 (320)
                      .|++++.|+++|+|+..+.
T Consensus       342 ~la~~s~d~~~k~w~~~~~  360 (432)
T d1qksa2         342 AMTGDGSDPEFKTLPIAEW  360 (432)
T ss_dssp             GCCCSSSCCCEEEECHHHH
T ss_pred             hhcccccCCceEecccccc
Confidence            8999999999999987654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=5.3e-17  Score=137.57  Aligned_cols=269  Identities=13%  Similarity=0.107  Sum_probs=168.6

Q ss_pred             CeEeecccce--eEEEEEeCccceEEEEEcCCCCEEEEe-cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          1 MIIWDGLTQT--KEHSVTMPATWVMACAYAPSGSVVASG-GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         1 ~~~W~~~~~~--~~~~~~~~~~~V~~~~~~~~~~~l~s~-~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      |++|++....  .......+...|..++|+|||++|+++ ..|+.|++|+++......... ....+......+.|++++
T Consensus        16 I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~-~~~~~~~~p~~l~~spDg   94 (333)
T d1ri6a_          16 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA-AESALPGSLTHISTDHQG   94 (333)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-EEEECSSCCSEEEECTTS
T ss_pred             EEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEe-eecccCCCceEEEEcCCC
Confidence            5799976443  223334566889999999999988554 558999999986433221111 112233445678999999


Q ss_pred             CEEEEEeC-CCeEEEEECCCcceee--ecccCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         78 QQILTGSG-DCTCALWDVESSQLLQ--SFHGHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        78 ~~l~s~~~-dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                      ++|++++. ++.+.+|+........  ....+...+.++.+  +++++.++.++. +..+.+|+...........     
T Consensus        95 ~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~--s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----  167 (333)
T d1ri6a_          95 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANI--SPDNRTLWVPALKQDRICLFTVSDDGHLVAQD-----  167 (333)
T ss_dssp             SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEE--CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE-----
T ss_pred             CEEeecccCCCceeeeccccccceecccccCCCccceEEEe--eecceeeeccccccceeeEEEeccCCcceeee-----
Confidence            99998885 6789999876654332  22334555666666  456777776664 4568888875543211100     


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCee----EeEEec----Ccceee
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKE----VACYKK----DSILFG  224 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~----~~~~~~----~~~~~~  224 (320)
                                      ..............++|++++..++.. ...+...+++......    ......    ......
T Consensus       168 ----------------~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (333)
T d1ri6a_         168 ----------------PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW  231 (333)
T ss_dssp             ----------------EEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred             ----------------ceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCcccc
Confidence                            000011233456789999999887654 4566788887653321    111111    011123


Q ss_pred             eEEEEEecCCcEEEEE-eCCCeEEEEcCCCCeEE---EEeecCCCceeEEEECcCCCeEEEe-cCCCceEeeec
Q psy14961        225 ATSVDFSVSGRLLFAG-YNDYTINVWDSLKCCRV---NHLMGHENRVSCLQVSPDGTAFSSG-SWDTTLRDEES  293 (320)
Q Consensus       225 ~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~~~---~~~~~h~~~i~~i~~s~~~~~l~s~-s~D~~ir~~~~  293 (320)
                      ...+.+++++++++.. ..++.+.+|+.......   .....+...+.+++|+|||++|+++ +.+++|++|+.
T Consensus       232 ~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~i  305 (333)
T d1ri6a_         232 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI  305 (333)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred             ceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence            4567899999977665 46788999976543222   2233445667899999999986655 56789999965

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.78  E-value=2.6e-17  Score=141.01  Aligned_cols=262  Identities=11%  Similarity=0.034  Sum_probs=174.1

Q ss_pred             EEcCCCCEEEEe-----cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE----------eCCCeEE
Q psy14961         26 AYAPSGSVVASG-----GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG----------SGDCTCA   90 (320)
Q Consensus        26 ~~~~~~~~l~s~-----~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~----------~~dg~v~   90 (320)
                      +.+||++.++..     +.++.+.+||....    ....++..+  ....+.|++++++|+++          ..|+.|+
T Consensus         8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg----~~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_           8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAG----RVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTT----EEEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             eeCCCCCEEEEEecccCCCcCeEEEEECCCC----cEEEEEECC--CCCceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence            568999988764     34567999987432    222333333  33468899999988764          3478999


Q ss_pred             EEECCCcceeeecccCccc-------eeEEEEeeCCCCCEEEEEe--CCCeEEEEeCCCCcEEEEeccCCc---------
Q psy14961         91 LWDVESSQLLQSFHGHTGE-------LMDLDLAPSETGNTFVSGS--SDKLVNIWDMRTGYCVQSFEGHHN---------  152 (320)
Q Consensus        91 iwd~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~l~s~~--~dg~i~lwd~~~~~~~~~~~~~~~---------  152 (320)
                      +||+.+++++..+..+...       ...+.+  +++++.++.++  .+..+.+||..++..+..+.....         
T Consensus        82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSL--TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPD  159 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCCCCBSCCGGGEEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETT
T ss_pred             EEECCCCCEEEEEecCCcceeecCCCCceEEE--ecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCc
Confidence            9999999887765433221       233445  55788777664  456899999999887766543221         


Q ss_pred             ---cccCCCeEEEEECcCCeeeeee------cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE--ecCc-
Q psy14961        153 ---LITDDKLVNIWDMRTGYCVQSF------EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY--KKDS-  220 (320)
Q Consensus       153 ---~~~~d~~i~iwd~~~~~~~~~~------~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~-  220 (320)
                         .++.|+....+...........      ..+...+....+.+++..++.++.++.+.+|++..++.....  .... 
T Consensus       160 ~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  239 (355)
T d2bbkh_         160 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTE  239 (355)
T ss_dssp             EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred             ceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCccc
Confidence               2344555555544332211111      123444666788888889999999999999999876532211  1110 


Q ss_pred             -------ceeeeEEEEEecCCcEEEEEeCC----------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC--eEEE
Q psy14961        221 -------ILFGATSVDFSVSGRLLFAGYND----------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT--AFSS  281 (320)
Q Consensus       221 -------~~~~~~~~~~s~~~~~l~~g~~d----------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~--~l~s  281 (320)
                             ...+...+++++++..++....+          ..|.+||..+++.+.++. +...+.+++|+|||+  ++++
T Consensus       240 ~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v~  318 (355)
T d2bbkh_         240 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYAL  318 (355)
T ss_dssp             HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEEEE
T ss_pred             ceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec-CCCCEEEEEEcCCCCeEEEEE
Confidence                   01122357899999988776543          369999999888877665 345689999999998  4678


Q ss_pred             ecCCCceEeeecchH
Q psy14961        282 GSWDTTLRDEESKNR  296 (320)
Q Consensus       282 ~s~D~~ir~~~~~~~  296 (320)
                      ++.|++|++||.++.
T Consensus       319 ~~~d~~i~v~D~~tg  333 (355)
T d2bbkh_         319 STGDKTLYIHDAESG  333 (355)
T ss_dssp             ETTTTEEEEEETTTC
T ss_pred             ECCCCEEEEEECCCC
Confidence            889999999997543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.78  E-value=6.8e-16  Score=133.07  Aligned_cols=269  Identities=10%  Similarity=-0.022  Sum_probs=174.3

Q ss_pred             eCccceEEEEEcCCCCEEEEec-----CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-------
Q psy14961         17 MPATWVMACAYAPSGSVVASGG-----LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-------   84 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~-----~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------   84 (320)
                      .+...+..++++|||+.++...     ..+.+.+||...    .....++..+..  ..+.|+++++++++++       
T Consensus        18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~t----g~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~   91 (373)
T d2madh_          18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGS----GSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIA   91 (373)
T ss_pred             cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCC----CCEEEEEeCCCC--ccEEEcCCCCEEEEEeecCCccc
Confidence            3556778899999999887642     234577777532    223334444433  3688999999998864       


Q ss_pred             ---CCCeEEEEECCCcceeeecccCcccee-------EEEEeeCCCCCEEEEE--eCCCeEEEEeCCCCcEEEEec----
Q psy14961         85 ---GDCTCALWDVESSQLLQSFHGHTGELM-------DLDLAPSETGNTFVSG--SSDKLVNIWDMRTGYCVQSFE----  148 (320)
Q Consensus        85 ---~dg~v~iwd~~~~~~~~~~~~~~~~v~-------~~~~~~~~~~~~l~s~--~~dg~i~lwd~~~~~~~~~~~----  148 (320)
                         .++.|.+||+.+++++..+..+.....       .+.+.+  +++.++..  ..++.+.+|+....+......    
T Consensus        92 ~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (373)
T d2madh_          92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP--NNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTC  169 (373)
T ss_pred             ccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEe--CCCcEEEEEEcCCCceEEeeccCCeEEEEecccee
Confidence               467899999999998877665544432       234443  45554443  445678888887765443322    


Q ss_pred             ------cCCc--cccCCCeEEEEECcCCeeeeeecCC------CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961        149 ------GHHN--LITDDKLVNIWDMRTGYCVQSFEGH------QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA  214 (320)
Q Consensus       149 ------~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~  214 (320)
                            +...  ....++.+.+|+...+........+      ......+.+++++. ++..+.++.+.+|+........
T Consensus       170 ~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~  248 (373)
T d2madh_         170 YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATN  248 (373)
T ss_pred             EEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEEE
Confidence                  1111  1246888999999887766544322      22234556666554 5566678899999988765432


Q ss_pred             EEecCcc----------eeeeEEEEEecCCcEEE----------EEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        215 CYKKDSI----------LFGATSVDFSVSGRLLF----------AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       215 ~~~~~~~----------~~~~~~~~~s~~~~~l~----------~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                      .......          ......+.+++++..++          ....++.+.+||..+++.+..+ .+...+.+++|+|
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~-~~~~~~~~~a~sp  327 (373)
T d2madh_         249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDVDAISVAQ  327 (373)
T ss_pred             EEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEe-cCCCCeeEEEECC
Confidence            2211100          01123355666665544          4455678999999888887755 4667789999999


Q ss_pred             CCC--eEEEecCCCceEeeecch
Q psy14961        275 DGT--AFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       275 ~~~--~l~s~s~D~~ir~~~~~~  295 (320)
                      ||+  ++++++.|++|++||.++
T Consensus       328 DG~~~l~vt~~~d~~v~v~D~~t  350 (373)
T d2madh_         328 DGGPDLYALSAGTEVLHIYDAGA  350 (373)
T ss_pred             CCCEEEEEEeCCCCeEEEEECCC
Confidence            998  457899999999999754

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.76  E-value=1.1e-15  Score=127.28  Aligned_cols=207  Identities=14%  Similarity=0.201  Sum_probs=156.2

Q ss_pred             EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCccc-----
Q psy14961         81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-----  154 (320)
Q Consensus        81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-----  154 (320)
                      ++++.|++|.+||+++++.+..++.. .....+++  +|+|++| ++++.++.|++||+.+++.+..+..+....     
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~--spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~   82 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVG-SNPMGAVI--SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS   82 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE--CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECC-CCceEEEE--eCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccc
Confidence            45678999999999999988887643 44556665  5678877 467788999999999998887775543211     


Q ss_pred             ----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961        155 ----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILF  223 (320)
Q Consensus       155 ----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~  223 (320)
                                ..+..+.+|+..+++....+..+ ....+++++|++..++ ++..++.+.+|+..+.+.........   
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  158 (301)
T d1l0qa2          83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR---  158 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS---
T ss_pred             cccccccccccccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCC---
Confidence                      24667899999999888877654 4567899999999874 56678899999999888776655443   


Q ss_pred             eeEEEEEecCCcEEEEEeCC-CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEec---CCCceEeeecch
Q psy14961        224 GATSVDFSVSGRLLFAGYND-YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS---WDTTLRDEESKN  295 (320)
Q Consensus       224 ~~~~~~~s~~~~~l~~g~~d-g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s---~D~~ir~~~~~~  295 (320)
                      .+..+.++|++..++++..+ +.+.+|+.........+. +...+..++|+++++.++.++   .+++|++||..+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t  233 (301)
T d1l0qa2         159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT  233 (301)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred             CceEEEeeccccceeeecccccccccccccceeeeeccc-ccCCcceeeccccccccccccccceeeeeeeeecCC
Confidence            24567899999988887754 667788776665555444 445678899999999877654   446899999654

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.76  E-value=1.8e-15  Score=130.37  Aligned_cols=259  Identities=10%  Similarity=-0.022  Sum_probs=170.5

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCcccccccccccccCe---
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATHTSFI---   68 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v---   68 (320)
                      .+||..+++....+..+.  ...++|+|||++|++++          .++.|.+||....+    ....+..+....   
T Consensus        50 ~v~D~~tg~~~~~~~~~~--~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~----~~~~~~~~~~~~~~~  123 (373)
T d2madh_          50 WVLDAGSGSILGHVNGGF--LPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL----PIADIELPDAPRFDV  123 (373)
T ss_pred             EEEECCCCCEEEEEeCCC--CccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCc----EEEEEecCCcceeEe
Confidence            578999998887665443  34789999999998875          45789999985322    122222222222   


Q ss_pred             ----EEEEecCCCCEEEEEe--CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCC
Q psy14961         69 ----SCCIFPNSDQQILTGS--GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTG  141 (320)
Q Consensus        69 ----~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~  141 (320)
                          ..+.|+++++.++...  .++.+.+|+..+.+......    ...++.+.+  +|+ .+++.+.|+.+.+||...+
T Consensus       124 ~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~--~g~~~~v~~~~dg~~~~~~~~~~  197 (373)
T d2madh_         124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS----SPTCYHIHP--GAPSTFYLLCAQGGLAKTDHAGG  197 (373)
T ss_pred             ccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec----cceeEEEec--CCCcEEEEEcCCCeEEEEEcCCc
Confidence                2356777777665543  45688888887766554332    234455554  344 5578889999999999877


Q ss_pred             cEEEEeccCC--------------------ccccCCCeEEEEECcCCeeee--eecCCC----------CCeEEEEEcCC
Q psy14961        142 YCVQSFEGHH--------------------NLITDDKLVNIWDMRTGYCVQ--SFEGHQ----------SDVNSVKFHPS  189 (320)
Q Consensus       142 ~~~~~~~~~~--------------------~~~~~d~~i~iwd~~~~~~~~--~~~~~~----------~~v~~v~~~p~  189 (320)
                      ..........                    .....++.+.+|+........  ....+.          .....++++|+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  277 (373)
T d2madh_         198 AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS  277 (373)
T ss_pred             eeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecC
Confidence            6544322110                    112356777888776654321  111111          12334566666


Q ss_pred             CCEE----------EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE--EEEEeCCCeEEEEcCCCCeEE
Q psy14961        190 GDAV----------ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL--LFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       190 g~~l----------~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~--l~~g~~dg~v~~wd~~~~~~~  257 (320)
                      +..+          ++...++.+.+||..+++.+.......   .+..++|+|||+.  +++++.+++|++||+.+++.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~---~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~  354 (373)
T d2madh_         278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD  354 (373)
T ss_pred             CCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCC---CeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEE
Confidence            5543          445667789999999988776655433   3467899999984  467889999999999999999


Q ss_pred             EEeecCCCceeEEEECcC
Q psy14961        258 NHLMGHENRVSCLQVSPD  275 (320)
Q Consensus       258 ~~~~~h~~~i~~i~~s~~  275 (320)
                      .++.+|....+.|++.++
T Consensus       355 ~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         355 QSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             EEECCCCCCCcEEEEecC
Confidence            999988887888887654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.73  E-value=7.8e-16  Score=131.61  Aligned_cols=265  Identities=11%  Similarity=0.050  Sum_probs=163.3

Q ss_pred             CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEe----------cCCCeEEEEEecccCCcccccccccc-------
Q psy14961          1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASG----------GLDNKVTVYAIALEDDSSAKKKTVAT-------   63 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~----------~~dg~i~v~~~~~~~~~~~~~~~~~~-------   63 (320)
                      +.+||..+++.+..+..+  ....++|+|||++|+.+          +.|+.|++||......    ...+..       
T Consensus        30 v~v~D~~tg~~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~----~~~~~~~~~~~~~  103 (355)
T d2bbkh_          30 QFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP----TADIELPDAPRFL  103 (355)
T ss_dssp             EEEEETTTTEEEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE----EEEEEETTCCCCC
T ss_pred             EEEEECCCCcEEEEEECC--CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCE----EEEEecCCcceee
Confidence            358999999887766544  34478999999988764          3478999998753221    111111       


Q ss_pred             cccCeEEEEecCCCCEEEEEe--CCCeEEEEECCCcceeeecccCccce-------eEEEEeeCCCCCEEEEE-eCCCeE
Q psy14961         64 HTSFISCCIFPNSDQQILTGS--GDCTCALWDVESSQLLQSFHGHTGEL-------MDLDLAPSETGNTFVSG-SSDKLV  133 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~l~s~-~~dg~i  133 (320)
                      .......+.|+++++.++.++  .+..+.+|+..+++.+..+..+....       ..+.+  .+++..++.. ..++.+
T Consensus       104 ~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~dg~~~~v~~~~~~~~  181 (355)
T d2bbkh_         104 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH--CRDGSLAKVAFGTEGTP  181 (355)
T ss_dssp             BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE--ETTSCEEEEECCSSSCC
T ss_pred             cCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEE--cCCCCEEEEEecCCCeE
Confidence            112234578899999887765  46789999999988877665433211       11111  2223333322 122233


Q ss_pred             EEEeCCCCcEE--------EEeccC--CccccCCCeEEEEECcCCeee--eeecCCC----------CCeEEEEEcCCCC
Q psy14961        134 NIWDMRTGYCV--------QSFEGH--HNLITDDKLVNIWDMRTGYCV--QSFEGHQ----------SDVNSVKFHPSGD  191 (320)
Q Consensus       134 ~lwd~~~~~~~--------~~~~~~--~~~~~~d~~i~iwd~~~~~~~--~~~~~~~----------~~v~~v~~~p~g~  191 (320)
                      .+++.......        ......  ......++.+++|++..+...  .....+.          .....++++|++.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~  261 (355)
T d2bbkh_         182 EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD  261 (355)
T ss_dssp             EEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred             EEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCC
Confidence            33333221110        000000  012246788999998776432  1122111          1234588999998


Q ss_pred             EEEEeeCC----------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc--EEEEEeCCCeEEEEcCCCCeEEEE
Q psy14961        192 AVATGSDD----------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR--LLFAGYNDYTINVWDSLKCCRVNH  259 (320)
Q Consensus       192 ~l~s~s~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~~g~~dg~v~~wd~~~~~~~~~  259 (320)
                      .++..+.+          ..|.+||..+++.+.......   .+..++|+|||+  +++++..+++|.+||..+++.+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~---~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~  338 (355)
T d2bbkh_         262 RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS  338 (355)
T ss_dssp             EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred             eEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCC---CEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEE
Confidence            87665433          479999999988776554332   346789999998  456677899999999999999998


Q ss_pred             eecCCCceeEEEECcCC
Q psy14961        260 LMGHENRVSCLQVSPDG  276 (320)
Q Consensus       260 ~~~h~~~i~~i~~s~~~  276 (320)
                      +.++...-..|.+.++|
T Consensus       339 i~~~G~~p~~i~~~d~~  355 (355)
T d2bbkh_         339 VNQLGHGPQVITTADMG  355 (355)
T ss_dssp             ECCCCSSCCEEECCCCC
T ss_pred             EeCcCCCccEEEeCCCC
Confidence            88777666677766554

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.59  E-value=9e-14  Score=119.78  Aligned_cols=264  Identities=6%  Similarity=-0.071  Sum_probs=169.0

Q ss_pred             EEEEEcCCCCE--E-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeE
Q psy14961         23 MACAYAPSGSV--V-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTC   89 (320)
Q Consensus        23 ~~~~~~~~~~~--l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v   89 (320)
                      ..++..+++..  + +++..++...+|-++..  .......+..+..  ..+.|+++++.|++++          .|+.|
T Consensus        23 ~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~--~~~~~~~~~~~~~--~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v   98 (368)
T d1mdah_          23 CDHGPGAISRRSHITLPAYFAGTTENWVSCAG--CGVTLGHSLGAFL--SLAVAGHSGSDFALASTSFARSAKGKRTDYV   98 (368)
T ss_dssp             BCCCCCCCTTEEEEEECTTTCSSEEEEEEETT--TTEEEEEEEECTT--CEEEECTTSSCEEEEEEEETTTTSSSEEEEE
T ss_pred             cccccCCCCcceeEEeeccCCCcceEEEEeCC--CCcEEEEEeCCCC--CcceECCCCCEEEEEcccCccccccccCCeE
Confidence            44456777774  2 33566677666655432  2223333433433  3578899999888754          47789


Q ss_pred             EEEECCCcceeeecccCccc-------eeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCc---------
Q psy14961         90 ALWDVESSQLLQSFHGHTGE-------LMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHN---------  152 (320)
Q Consensus        90 ~iwd~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~---------  152 (320)
                      ++||..+++++..+..+...       ...++|  ++||+++++++ .++.+.+||+.+++....+..+..         
T Consensus        99 ~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~--SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~  176 (368)
T d1mdah_          99 EVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN--CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAA  176 (368)
T ss_dssp             EEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE--CTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETT
T ss_pred             EEEECCCCcEeeeecCCccceecccCCccceEE--CCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCc
Confidence            99999999887766533221       223555  66788888776 578999999999988776644322         


Q ss_pred             ---cccCCCeEEEEECcCCeeee------eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---
Q psy14961        153 ---LITDDKLVNIWDMRTGYCVQ------SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---  220 (320)
Q Consensus       153 ---~~~~d~~i~iwd~~~~~~~~------~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---  220 (320)
                         ..+.|+.+.+++........      .+..+...+..+.+.+++..+.+.  ++.+.++++..+..........   
T Consensus       177 ~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~  254 (368)
T d1mdah_         177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNES  254 (368)
T ss_dssp             EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSCT
T ss_pred             eEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeecccccc
Confidence               22467888888775543221      122344455677888887666544  4556777766554332221110   


Q ss_pred             -------ceeeeEEEEEecCCcEEEEEeCC---------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC--eEEEe
Q psy14961        221 -------ILFGATSVDFSVSGRLLFAGYND---------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT--AFSSG  282 (320)
Q Consensus       221 -------~~~~~~~~~~s~~~~~l~~g~~d---------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~--~l~s~  282 (320)
                             ...+...++++|++..++....+         ..|.+||..+++.+.++. +...+.+++|+|||+  +++++
T Consensus       255 ~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~a~spDG~~~ly~s~  333 (368)
T d1mdah_         255 GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANS  333 (368)
T ss_dssp             HHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCSSSCEEEEEE
T ss_pred             eeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec-CCCceeEEEECCCCCEEEEEEe
Confidence                   00122357889999877665422         358899999888877665 345789999999997  36788


Q ss_pred             cCCCceEeeecch
Q psy14961        283 SWDTTLRDEESKN  295 (320)
Q Consensus       283 s~D~~ir~~~~~~  295 (320)
                      +.|++|++||.+.
T Consensus       334 ~~~~~v~v~D~~t  346 (368)
T d1mdah_         334 AGTEVLDIYDAAS  346 (368)
T ss_dssp             TTTTEEEEEESSS
T ss_pred             CCCCeEEEEECCC
Confidence            8899999999643

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=1.6e-12  Score=109.39  Aligned_cols=235  Identities=12%  Similarity=0.171  Sum_probs=150.0

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CCeEEEEECCCcceeeec---ccCcc
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DCTCALWDVESSQLLQSF---HGHTG  108 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~---~~~~~  108 (320)
                      .+++++.|++|++|+++....  ........|...+..+.|+|++++|++++. |+.|++|++........+   ..+..
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~--l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~   83 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGA--LTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG   83 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSC--EEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred             EEEECCCCCcEEEEEEcCCCC--eEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCC
Confidence            457778999999999863221  112223457788899999999999876664 899999998765322221   12333


Q ss_pred             ceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc
Q psy14961        109 ELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH  187 (320)
Q Consensus       109 ~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~  187 (320)
                      .+..+++  +++|++|++++. ++.+.+|+.........                         .....+...+.++.++
T Consensus        84 ~p~~l~~--spDg~~l~v~~~~~~~v~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~v~~s  136 (333)
T d1ri6a_          84 SLTHIST--DHQGQFVFVGSYNAGNVSVTRLEDGLPVGV-------------------------VDVVEGLDGCHSANIS  136 (333)
T ss_dssp             CCSEEEE--CTTSSEEEEEETTTTEEEEEEEETTEEEEE-------------------------EEEECCCTTBCCCEEC
T ss_pred             CceEEEE--cCCCCEEeecccCCCceeeeccccccceec-------------------------ccccCCCccceEEEee
Confidence            4455655  667999888875 66788887654432211                         1122345567789999


Q ss_pred             CCCCEEEEee-CCCeEEEEECCCCeeEeEEec----CcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCC----eEE
Q psy14961        188 PSGDAVATGS-DDATCRLFDLRADKEVACYKK----DSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKC----CRV  257 (320)
Q Consensus       188 p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~----~~~  257 (320)
                      |++++++.++ .+..+.+|+............    .........++|++++.+++... ..+...+|+....    ...
T Consensus       137 ~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  216 (333)
T d1ri6a_         137 PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV  216 (333)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE
T ss_pred             ecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeee
Confidence            9999887766 456799999876543322111    11112346789999999887665 5567777764321    111


Q ss_pred             EEee------cCCCceeEEEECcCCCeE-EEecCCCceEeeecchH
Q psy14961        258 NHLM------GHENRVSCLQVSPDGTAF-SSGSWDTTLRDEESKNR  296 (320)
Q Consensus       258 ~~~~------~h~~~i~~i~~s~~~~~l-~s~s~D~~ir~~~~~~~  296 (320)
                      ....      ........+++++|++++ +++..++++++|+....
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~  262 (333)
T d1ri6a_         217 QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED  262 (333)
T ss_dssp             EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             eeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCC
Confidence            1221      223456789999999865 45567788999886443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.56  E-value=5.8e-13  Score=114.57  Aligned_cols=256  Identities=10%  Similarity=-0.027  Sum_probs=158.6

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccccc-------
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATH-------   64 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h-------   64 (320)
                      .+||..+++....+..+..  ..++|+|||+.|+.++          .|+.|++||.....    ....+..+       
T Consensus        49 ~~~d~~~~~~~~~~~~~~~--~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~----~~~~i~~p~~~~~~~  122 (368)
T d1mdah_          49 WVSCAGCGVTLGHSLGAFL--SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL----PIADIELPDAPRFSV  122 (368)
T ss_dssp             EEEETTTTEEEEEEEECTT--CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC----EEEEEEETTSCSCCB
T ss_pred             EEEeCCCCcEEEEEeCCCC--CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCc----EeeeecCCccceecc
Confidence            4668888888877666544  4688999999888754          47789999875321    11111111       


Q ss_pred             ccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961         65 TSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC  143 (320)
Q Consensus        65 ~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~  143 (320)
                      ......+.|++++++++++. .++.+.+||+.+++.+..+..+.....    .+.. ...++..+.||.+.++++.....
T Consensus       123 g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----~~~~-~~~~v~~~~Dg~~~~~~~~~~~~  197 (368)
T d1mdah_         123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI----HPGA-AATHYLGSCPASLAASDLAAAPA  197 (368)
T ss_dssp             SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC----EEEE-TTEEECCCCTTSCEEEECCSSCC
T ss_pred             cCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE----ccCC-CceEEEEcCCCCEEEEEecCCce
Confidence            11123578999999998876 579999999999988877665443321    1111 34667777888888887754322


Q ss_pred             EEEec------cC-------------CccccCCCeEEEEECcCCeeeee--ecCC----------CCCeEEEEEcCCCCE
Q psy14961        144 VQSFE------GH-------------HNLITDDKLVNIWDMRTGYCVQS--FEGH----------QSDVNSVKFHPSGDA  192 (320)
Q Consensus       144 ~~~~~------~~-------------~~~~~~d~~i~iwd~~~~~~~~~--~~~~----------~~~v~~v~~~p~g~~  192 (320)
                      .....      .+             .......+.+.+++...+.....  ...+          ......++++|++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~  277 (368)
T d1mdah_         198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG  277 (368)
T ss_dssp             CCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTE
T ss_pred             eeeeeecccccccccceeecccccCcEEEEecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCE
Confidence            11110      00             00112344555666544332211  1111          111235789999887


Q ss_pred             EEEeeCC---------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-E-EEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        193 VATGSDD---------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-L-LFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       193 l~s~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~-l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      ++....+         ..+.+||..+++.+......   ..+..++|+|||+ + ++++..+++|.+||..+++.+.++.
T Consensus       278 ~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~---~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~  354 (368)
T d1mdah_         278 IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE  354 (368)
T ss_dssp             EEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred             EEEEecCCCceeecCCceEEEEECCCCcEeEEecCC---CceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEE
Confidence            6554322         35899999988876554432   2356789999997 3 4566778999999999999888776


Q ss_pred             cCCCceeEEEE
Q psy14961        262 GHENRVSCLQV  272 (320)
Q Consensus       262 ~h~~~i~~i~~  272 (320)
                      -... -+.|++
T Consensus       355 ~g~~-P~~l~~  364 (368)
T d1mdah_         355 LDKG-PESLSV  364 (368)
T ss_dssp             CCSC-CCEEEC
T ss_pred             CCCC-CCEEEE
Confidence            4332 344544

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.48  E-value=4.4e-13  Score=119.23  Aligned_cols=123  Identities=6%  Similarity=-0.025  Sum_probs=86.2

Q ss_pred             CeEeecccceeEEEEEe-----CccceEEEEEcCCCCEEEEecC---------CCeEEEEEecccCCccccccccccccc
Q psy14961          1 MIIWDGLTQTKEHSVTM-----PATWVMACAYAPSGSVVASGGL---------DNKVTVYAIALEDDSSAKKKTVATHTS   66 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~-----~~~~V~~~~~~~~~~~l~s~~~---------dg~i~v~~~~~~~~~~~~~~~~~~h~~   66 (320)
                      |.+||..+++...-+..     +...|.+..|||||++|+.++.         ++.+.+||+...     ....+..|..
T Consensus        38 ~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~-----~~~~l~~~~~  112 (470)
T d2bgra1          38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-----QLITEERIPN  112 (470)
T ss_dssp             EEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-----EECCSSCCCT
T ss_pred             EEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCC-----cccccccCCc
Confidence            46899998887543322     2356899999999999998753         567889987532     2345667788


Q ss_pred             CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCc------------------cceeEEEEeeCCCCCEEEEEe
Q psy14961         67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHT------------------GELMDLDLAPSETGNTFVSGS  128 (320)
Q Consensus        67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~~l~s~~  128 (320)
                      .+....|+|+|+.++.. .++.+.+|+..++...+....+.                  +....+.|  +|||+.|+...
T Consensus       113 ~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~w--SPDGk~ia~~~  189 (470)
T d2bgra1         113 NTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWW--SPNGTFLAYAQ  189 (470)
T ss_dssp             TEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEE--CTTSSEEEEEE
T ss_pred             cccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEE--CCCCCccceeE
Confidence            89999999999999885 47799999998876554332111                  12233444  67899999876


Q ss_pred             CCC
Q psy14961        129 SDK  131 (320)
Q Consensus       129 ~dg  131 (320)
                      .|.
T Consensus       190 ~d~  192 (470)
T d2bgra1         190 FND  192 (470)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            543

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.41  E-value=3.2e-12  Score=111.06  Aligned_cols=225  Identities=14%  Similarity=0.097  Sum_probs=140.2

Q ss_pred             cccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCC----------
Q psy14961         64 HTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDK----------  131 (320)
Q Consensus        64 h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg----------  131 (320)
                      |.....+....++|++|++.. .+.+|.++|+.+.+....+. ........+.+.+.+.-.+++..+.+.          
T Consensus        70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~  149 (441)
T d1qnia2          70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF  149 (441)
T ss_dssp             CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred             cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence            334445555577898887665 57899999999988776554 235567777775543333555555442          


Q ss_pred             -------eEEEEeCCCCcEEEEeccCC-----------------------c-----------------------------
Q psy14961        132 -------LVNIWDMRTGYCVQSFEGHH-----------------------N-----------------------------  152 (320)
Q Consensus       132 -------~i~lwd~~~~~~~~~~~~~~-----------------------~-----------------------------  152 (320)
                             .+..+|..+......+.-..                       .                             
T Consensus       150 ~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dG  229 (441)
T d1qnia2         150 SLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAG  229 (441)
T ss_dssp             CGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTT
T ss_pred             ccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCC
Confidence                   23456766654433221000                       0                             


Q ss_pred             ---cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeE--------e-EEecC
Q psy14961        153 ---LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEV--------A-CYKKD  219 (320)
Q Consensus       153 ---~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~--------~-~~~~~  219 (320)
                         .+..++.+.+++......+..++.... ...+.++|||+++ +++..++++.+||+..-...        . .....
T Consensus       230 k~~~v~~~~v~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~  308 (441)
T d1qnia2         230 NFKTIGDSKVPVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEP  308 (441)
T ss_dssp             CCBCCTTCCCCEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECC
T ss_pred             CEEEeCCCCcEEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeec
Confidence               001133445555444455555655444 3679999999987 56678999999998542110        0 00111


Q ss_pred             cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC---------C-eEEEEe-----ecCCCceeEEEECcCCCeEEEe--
Q psy14961        220 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK---------C-CRVNHL-----MGHENRVSCLQVSPDGTAFSSG--  282 (320)
Q Consensus       220 ~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~---------~-~~~~~~-----~~h~~~i~~i~~s~~~~~l~s~--  282 (320)
                      ....+..-..|+++|..+.+.+-|.+|..|++..         . ..+..+     .+|...+.+.+|+|||++|+|+  
T Consensus       309 ~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k  388 (441)
T d1qnia2         309 ELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK  388 (441)
T ss_dssp             BCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred             ccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence            1223445578999999888889999999998531         1 122222     5888888889999999999999  


Q ss_pred             -cCCCceE
Q psy14961        283 -SWDTTLR  289 (320)
Q Consensus       283 -s~D~~ir  289 (320)
                       |.|+.+-
T Consensus       389 ~s~dr~~~  396 (441)
T d1qnia2         389 FSKDRFLP  396 (441)
T ss_dssp             CCGGGSCC
T ss_pred             cccccCcC
Confidence             6665544

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.27  E-value=5.1e-09  Score=87.06  Aligned_cols=240  Identities=11%  Similarity=0.004  Sum_probs=147.3

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-   98 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-   98 (320)
                      .++..++++|||+++++...++.|..++.+  ..    ...+......+.++.+.+++..+++...++.+..++..... 
T Consensus        28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~--g~----~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~  101 (302)
T d2p4oa1          28 TFLENLASAPDGTIFVTNHEVGEIVSITPD--GN----QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG  101 (302)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT--CC----EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred             CCcCCEEECCCCCEEEEeCCCCEEEEEeCC--CC----EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccc
Confidence            578899999999999999989988777543  11    12233445678899999999988888888888888765432 


Q ss_pred             -eeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961         99 -LLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG  176 (320)
Q Consensus        99 -~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~  176 (320)
                       ...... ........+.+  .++++.+++-+.++.+..+|...+..........                 ........
T Consensus       102 ~~~~~~~~~~~~~~n~i~~--~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~  162 (302)
T d2p4oa1         102 TVETLLTLPDAIFLNGITP--LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM-----------------LARSNSES  162 (302)
T ss_dssp             CEEEEEECTTCSCEEEEEE--SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG-----------------GSCSSTTC
T ss_pred             ceeeccccCCccccceeEE--ccCCCEEeeccccccceeeeccCCcceeEecCCc-----------------cceeeccC
Confidence             111111 12233444544  5567777777888888888877654221111100                 00000111


Q ss_pred             CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe-
Q psy14961        177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC-  255 (320)
Q Consensus       177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~-  255 (320)
                      .....+.+.++.+ ..+++.+.++.|..++.....................++|+++|.++++...++.|..++..... 
T Consensus       163 ~~~~~ngi~~~~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~  241 (302)
T d2p4oa1         163 VFPAANGLKRFGN-FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTT  241 (302)
T ss_dssp             CSCSEEEEEEETT-EEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEE
T ss_pred             cccccccccccCC-ceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEE
Confidence            2234566777643 34566677888988887654332111110011123468899999988888888999999765432 


Q ss_pred             EEEEeecCCCceeEEEE---CcCCCeEEEecCC
Q psy14961        256 RVNHLMGHENRVSCLQV---SPDGTAFSSGSWD  285 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~---s~~~~~l~s~s~D  285 (320)
                      .+......-...++++|   ++|++.|..++..
T Consensus       242 ~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         242 IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             EEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             EEEecCCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence            22333334456899999   7788877665543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.20  E-value=2.7e-08  Score=83.06  Aligned_cols=256  Identities=12%  Similarity=0.094  Sum_probs=142.6

Q ss_pred             eEEEEEcCCCCEEEEecC-------CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961         22 VMACAYAPSGSVVASGGL-------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV   94 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~-------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~   94 (320)
                      .-..+|+++|++.++...       ++.|..|+....................-..+.+.+++..++++...+.+...+.
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~   99 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQT   99 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEET
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeC
Confidence            456789999997776433       3556666543211111000001111122346888888888888887778888888


Q ss_pred             CCcceeeecccCcc----ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961         95 ESSQLLQSFHGHTG----ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC  170 (320)
Q Consensus        95 ~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~  170 (320)
                      +............+    ....+.+  +++|++.++-. .+....++..           .......+.+..++.. ++.
T Consensus       100 ~g~~~~~~~~~~~g~~~~~pndl~~--d~~G~lyvtd~-~~~~~~~~~~-----------~~~~~~~G~v~~~~~d-g~~  164 (314)
T d1pjxa_         100 DGTFEEIAKKDSEGRRMQGCNDCAF--DYEGNLWITAP-AGEVAPADYT-----------RSMQEKFGSIYCFTTD-GQM  164 (314)
T ss_dssp             TSCEEECCSBCTTSCBCBCCCEEEE--CTTSCEEEEEC-BCBCTTSCCC-----------BTTSSSCEEEEEECTT-SCE
T ss_pred             CCcEEEEEeccccccccCCCcEEEE--CCCCCEEEecC-ccCccccccc-----------ceeccCCceEEEEeec-Cce
Confidence            76543221111111    1233444  44555444321 1111111100           0011123333333321 221


Q ss_pred             eeeecCCCCCeEEEEEcCCCC-----EEEEeeCCCeEEEEECCCCeeEeEE---ec-C-cceeeeEEEEEecCCcEEEEE
Q psy14961        171 VQSFEGHQSDVNSVKFHPSGD-----AVATGSDDATCRLFDLRADKEVACY---KK-D-SILFGATSVDFSVSGRLLFAG  240 (320)
Q Consensus       171 ~~~~~~~~~~v~~v~~~p~g~-----~l~s~s~dg~i~iwd~~~~~~~~~~---~~-~-~~~~~~~~~~~s~~~~~l~~g  240 (320)
                      .... ..-..-+.++|+|+++     .+++-+..+.|..+|+.....+...   .. . ........+++.++|++.++.
T Consensus       165 ~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~  243 (314)
T d1pjxa_         165 IQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN  243 (314)
T ss_dssp             EEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred             eEee-CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEE
Confidence            1111 1122347899998765     4455677889999987644332211   11 1 111124568899999988888


Q ss_pred             eCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeec
Q psy14961        241 YNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEES  293 (320)
Q Consensus       241 ~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~  293 (320)
                      ...+.|..||...+..+..+..+....++++|.||++ ++++.+.+++|...+.
T Consensus       244 ~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~  297 (314)
T d1pjxa_         244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             cCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence            8899999999876666666666667789999999987 6677777888877664

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.18  E-value=7.2e-08  Score=82.16  Aligned_cols=286  Identities=12%  Similarity=0.131  Sum_probs=149.4

Q ss_pred             EeecccceeEE--EEEeC-ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961          3 IWDGLTQTKEH--SVTMP-ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ   79 (320)
Q Consensus         3 ~W~~~~~~~~~--~~~~~-~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~   79 (320)
                      ..|.++.+...  ....+ ...+.-++|+|++++|.++.. +.+..|.++.+.. ...... .........+.++++++.
T Consensus        20 ~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~-~~~~~~-~~~~~~p~~v~~~~~~~~   96 (365)
T d1jofa_          20 QFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTE-IVHEAS-HPIGGHPRANDADTNTRA   96 (365)
T ss_dssp             EEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTE-EEEEEE-EECCSSGGGGCTTSCCEE
T ss_pred             EEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCC-eEEEee-ecCCCCcEEEEECCCCCE
Confidence            34666655321  11222 334556999999999988765 5688887753211 111100 001112223445566653


Q ss_pred             EE--EEe-CCCeEEEEECCC-c------------ce---eeec-ccCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeC
Q psy14961         80 IL--TGS-GDCTCALWDVES-S------------QL---LQSF-HGHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDM  138 (320)
Q Consensus        80 l~--s~~-~dg~v~iwd~~~-~------------~~---~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~  138 (320)
                      ++  ++. ..+.|..+.+.. +            +.   .... ......++++.+  +|+|++++++.. ...|.+|+.
T Consensus        97 ~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~--sPdG~~l~v~d~g~d~v~~~~~  174 (365)
T d1jofa_          97 IFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVF--DPTETYLYSADLTANKLWTHRK  174 (365)
T ss_dssp             EEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEE--CCCCCEEEEeeCCCCEEEEEEc
Confidence            32  221 234554443321 1            00   0000 001122455555  567888887754 346777764


Q ss_pred             CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEe
Q psy14961        139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYK  217 (320)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~  217 (320)
                      .....+...                     ... ...........++|+|++++++... .+++|.+|++...+......
T Consensus       175 ~~~g~~~~~---------------------~~~-~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~  232 (365)
T d1jofa_         175 LASGEVELV---------------------GSV-DAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT  232 (365)
T ss_dssp             CTTSCEEEE---------------------EEE-ECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             cCCCceeec---------------------cce-eecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEE
Confidence            321111000                     000 0112334578899999999885554 58899999987654321111


Q ss_pred             cC-----------------cceeeeEEEEEecCCcEEEEEeC------CCeEEEEcCCCCeEEE---Ee---ecCCCcee
Q psy14961        218 KD-----------------SILFGATSVDFSVSGRLLFAGYN------DYTINVWDSLKCCRVN---HL---MGHENRVS  268 (320)
Q Consensus       218 ~~-----------------~~~~~~~~~~~s~~~~~l~~g~~------dg~v~~wd~~~~~~~~---~~---~~h~~~i~  268 (320)
                      ..                 ........+.++|+|++|+++..      .+.|..|+......+.   .+   ........
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~  312 (365)
T d1jofa_         233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN  312 (365)
T ss_dssp             EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC
T ss_pred             eeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCcc
Confidence            00                 00112456889999999988742      2347777654322111   11   12234567


Q ss_pred             EEEECc-CCCeEEEe-cCCCceEeeecchHhhhheeeeeeecCCcceEE
Q psy14961        269 CLQVSP-DGTAFSSG-SWDTTLRDEESKNRYVQYLLRSRITKPTQGLTV  315 (320)
Q Consensus       269 ~i~~s~-~~~~l~s~-s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (320)
                      +++|+| +|++|+.+ ..+++|.+|+..........+.+..+|.-|+.+
T Consensus       313 ~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~vp~p~~~~~~  361 (365)
T d1jofa_         313 AVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNA  361 (365)
T ss_dssp             CEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEE
T ss_pred             EEEecCCCCCEEEEEeCCCCeEEEEEEeCCcCcEEEEEECCCCCCCeEE
Confidence            899998 88966555 678999999864443333334455566655544

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.14  E-value=2.2e-07  Score=75.88  Aligned_cols=238  Identities=12%  Similarity=0.163  Sum_probs=141.3

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc---cccccCeEEEEecCC-CCEEEEE-eCCCeEEEEECCC
Q psy14961         22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV---ATHTSFISCCIFPNS-DQQILTG-SGDCTCALWDVES   96 (320)
Q Consensus        22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~-~~~l~s~-~~dg~v~iwd~~~   96 (320)
                      =..++++++|+++++-...+.|++|+.+.  .........   ......-..+.+..+ +..+++. +.++.|..++.. 
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~G--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-  101 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKEG--RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-  101 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTTS--CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCCC--CEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc-
Confidence            36899999999888877788899997542  111001000   001111122333333 3334333 345677777754 


Q ss_pred             cceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         97 SQLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        97 ~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      +.....+.. .......+++  .++|..+++....+.+.+++.. +..+..+                ..         .
T Consensus       102 g~~~~~~~~~~~~~p~~~av--d~~G~i~v~~~~~~~~~~~~~~-g~~~~~~----------------g~---------~  153 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTV--DNKGRIIVVECKVMRVIIFDQN-GNVLHKF----------------GC---------S  153 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEE----------------EC---------T
T ss_pred             ccceeecCCCcccccceecc--ccCCcEEEEeeccceeeEeccC-Cceeecc----------------cc---------c
Confidence            444444321 1222333433  4456666655555556555532 2222211                11         1


Q ss_pred             CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKC  254 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~  254 (320)
                      .+......+++.++|+.+++....+.|.++|... +.+..+........+..++++++|+++++-. .++.|.+|+. .+
T Consensus       154 ~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G-~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G  231 (279)
T d1q7fa_         154 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DG  231 (279)
T ss_dssp             TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TS
T ss_pred             ccccccceeeeccceeEEeeeccccceeeeecCC-ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CC
Confidence            2444567889999998888888899999999764 4444443222223356789999999777754 4567999984 45


Q ss_pred             eEEEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961        255 CRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEES  293 (320)
Q Consensus       255 ~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~  293 (320)
                      +.+.++...  ......|++.|||++++ ++.+..|++|+.
T Consensus       232 ~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~  271 (279)
T d1q7fa_         232 QLISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRY  271 (279)
T ss_dssp             CEEEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEEC
T ss_pred             CEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEe
Confidence            666655433  23578999999997655 567899999986

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.14  E-value=5.1e-08  Score=78.96  Aligned_cols=237  Identities=14%  Similarity=0.115  Sum_probs=137.8

Q ss_pred             EEEEEcCCCCEEEE-ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee
Q psy14961         23 MACAYAPSGSVVAS-GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ  101 (320)
Q Consensus        23 ~~~~~~~~~~~l~s-~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  101 (320)
                      .+++++++|++.++ .+..+.+..++.....   .......+. .....+.+.+++..+++....+.+++++..+...+.
T Consensus        17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~---~~~~~~~~~-~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~   92 (260)
T d1rwia_          17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTG---TTVLPFNGL-YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL   92 (260)
T ss_dssp             EEEEECTTCCEEEEECSSSCEEEEEC----C---EEECCCCSC-CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred             CEEEEcCCCCEEEEEcCCCCEEEEEcCCCce---EEEeccCCc-cCceEEEEcCCCCEEEeeeeeceeeeeeeccceeee
Confidence            68899999996655 4555777666543211   111111111 123456677777766666566666666555444443


Q ss_pred             ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCe
Q psy14961        102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDV  181 (320)
Q Consensus       102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v  181 (320)
                      .... ......+++  +++++.+++-..+..+..++.......                          .....+ ....
T Consensus        93 ~~~~-~~~p~~iav--d~~g~i~v~d~~~~~~~~~~~~~~~~~--------------------------~~~~~~-~~~p  142 (260)
T d1rwia_          93 PFDG-LNYPEGLAV--DTQGAVYVADRGNNRVVKLAAGSKTQT--------------------------VLPFTG-LNDP  142 (260)
T ss_dssp             CCCS-CCSEEEEEE--CTTCCEEEEEGGGTEEEEECTTCSSCE--------------------------ECCCCS-CCSC
T ss_pred             eeee-eeecccccc--cccceeEeeccccccccccccccceee--------------------------eeeecc-cCCc
Confidence            3222 223445544  445665555444444444443221100                          000011 1233


Q ss_pred             EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961        182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM  261 (320)
Q Consensus       182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~  261 (320)
                      ..++++|+|+.+++...++.|..+|........ ... .....+..++++++|.++++....+.|..++...........
T Consensus       143 ~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~-~~~-~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~  220 (260)
T d1rwia_         143 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-LPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF  220 (260)
T ss_dssp             CEEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-CCC-SSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCC
T ss_pred             ceeeecCCCCEeeeccccccccccccccceeee-eec-cccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEcc
Confidence            578999999988888888999999987554322 111 112234678899999988888888888888755432221112


Q ss_pred             cCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961        262 GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN  295 (320)
Q Consensus       262 ~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~  295 (320)
                      ..-.....|+++++|+++++-..+.+|+..++.+
T Consensus       221 ~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~~  254 (260)
T d1rwia_         221 TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE  254 (260)
T ss_dssp             CSCCCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred             CCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCCC
Confidence            2334578999999999999888888888766543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.07  E-value=1.3e-09  Score=96.37  Aligned_cols=146  Identities=16%  Similarity=0.177  Sum_probs=99.5

Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961        119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD  198 (320)
Q Consensus       119 ~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~  198 (320)
                      +++++++  ..|+.+.+||+.+++....+..+                      .+..|...|.++.|||||++|+.++.
T Consensus        26 ~d~~~~~--~~~~~~~~~~~~t~~~~~~~~~~----------------------~~~~~~~~i~~~~~SpDg~~i~~~~~   81 (470)
T d2bgra1          26 SDHEYLY--KQENNILVFNAEYGNSSVFLENS----------------------TFDEFGHSINDYSISPDGQFILLEYN   81 (470)
T ss_dssp             SSSEEEE--ESSSCEEEEETTTCCEEEEECTT----------------------TTTTSSSCCCEEEECTTSSEEEEEEE
T ss_pred             CCCEEEE--EcCCcEEEEECCCCCEEEEEchh----------------------hhhhccCccceeEECCCCCEEEEEEC
Confidence            3455554  34677888888887654433221                      23456678999999999999988753


Q ss_pred             ---------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-------
Q psy14961        199 ---------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-------  262 (320)
Q Consensus       199 ---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-------  262 (320)
                               ++.+.+||+.+++... .....  -....+.|||||+.+|... ++.+.+|+...+........       
T Consensus        82 ~~~~~r~s~~~~~~l~d~~~~~~~~-l~~~~--~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~  157 (470)
T d2bgra1          82 YVKQWRHSYTASYDIYDLNKRQLIT-EERIP--NNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIY  157 (470)
T ss_dssp             EEECSSSCEEEEEEEEETTTTEECC-SSCCC--TTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred             CcceeeeccCceEEEEECCCCcccc-cccCC--ccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCccc
Confidence                     5678899999876432 22221  1246788999999999965 66899999776654432211       


Q ss_pred             -----------CCCceeEEEECcCCCeEEEecCCCc-eEeee
Q psy14961        263 -----------HENRVSCLQVSPDGTAFSSGSWDTT-LRDEE  292 (320)
Q Consensus       263 -----------h~~~i~~i~~s~~~~~l~s~s~D~~-ir~~~  292 (320)
                                 +.+....+.|||||+.||....|.+ ++.+.
T Consensus       158 ~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred             ccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEE
Confidence                       1233567899999999999987765 55444

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.00  E-value=4.9e-07  Score=72.89  Aligned_cols=221  Identities=13%  Similarity=0.130  Sum_probs=118.2

Q ss_pred             EEeCccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CCeEEEE
Q psy14961         15 VTMPATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DCTCALW   92 (320)
Q Consensus        15 ~~~~~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iw   92 (320)
                      +......+.+-+|||||+.||.... .+.-.+|.......   ....+..+........|++++..++.... ++...++
T Consensus        34 l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~  110 (269)
T d2hqsa1          34 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG---AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY  110 (269)
T ss_dssp             EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---CEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccC---ceeEEeeeecccccceecCCCCeeeEeeecCCcccee
Confidence            3334566788899999999987543 33333443332211   12234456677788899999988876553 3333333


Q ss_pred             EC--CCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeE--EEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         93 DV--ESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLV--NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        93 d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i--~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                      ..  .......... .........+  ..+++.+ ++...++..  .+.++..+                          
T Consensus       111 ~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~g~~~i~~~~~~~~--------------------------  161 (269)
T d2hqsa1         111 VMDLASGQIRQVTD-GRSNNTEPTW--FPDSQNLAFTSDQAGRPQVYKVNINGG--------------------------  161 (269)
T ss_dssp             EEETTTCCEEECCC-CSSCEEEEEE--CTTSSEEEEEECTTSSCEEEEEETTSS--------------------------
T ss_pred             ecccccccceeeee-cccccccccc--ccccccceecccccCCceEeeeecccc--------------------------
Confidence            22  2222222111 1111111222  2333333 333334432  22232221                          


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEE--EECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC--
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRL--FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN--  242 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~--  242 (320)
                       . ...+..+........|+|+++.++..+. ++...+  .+...+... .....   .......|||||+.|+..+.  
T Consensus       162 -~-~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~---~~~~~p~~SPDG~~i~f~s~~~  235 (269)
T d2hqsa1         162 -A-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST---FLDETPSLAPNGTMVIYSSSQG  235 (269)
T ss_dssp             -C-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS---SSCEEEEECTTSSEEEEEEEET
T ss_pred             -c-ceeeecccccccccccccccceeEEEeecCCceeeeEeecccccce-EeecC---ccccceEECCCCCEEEEEEcCC
Confidence             1 1112223445677899999998876654 444444  455444322 11111   12345679999998876543  


Q ss_pred             -CCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961        243 -DYTINVWDSLKCCRVNHLMGHENRVSCLQVSP  274 (320)
Q Consensus       243 -dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~  274 (320)
                       ...+.++++..... .++......+...+|||
T Consensus       236 ~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         236 MGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             TEEEEEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred             CCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence             34678888765543 45666677888999999

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.00  E-value=3.9e-08  Score=84.97  Aligned_cols=135  Identities=12%  Similarity=0.032  Sum_probs=84.3

Q ss_pred             CCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCC--EEEEeeCCC-----------------eEEEEECCCCeeEeEE
Q psy14961        157 DKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGD--AVATGSDDA-----------------TCRLFDLRADKEVACY  216 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~--~l~s~s~dg-----------------~i~iwd~~~~~~~~~~  216 (320)
                      +..|.++|++++++...+. .+...+..++|+|+|+  +++..+++.                 .+..+|..+.+.....
T Consensus        93 ~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          93 NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            3455566666665555443 3456788999999998  444444432                 1244666655544333


Q ss_pred             ecCcceeeeEEEEEecCCcEEEEEeCC-----------------------------------------CeEEEEcCCCCe
Q psy14961        217 KKDSILFGATSVDFSVSGRLLFAGYND-----------------------------------------YTINVWDSLKCC  255 (320)
Q Consensus       217 ~~~~~~~~~~~~~~s~~~~~l~~g~~d-----------------------------------------g~v~~wd~~~~~  255 (320)
                      ....   ....+.|+|+|+++++.+.+                                         +.+.+++.....
T Consensus       173 ~v~~---~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~  249 (441)
T d1qnia2         173 IVDG---NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESE  249 (441)
T ss_dssp             EESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCS
T ss_pred             ecCC---CccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCc
Confidence            3222   23568899999988877532                                         344455444433


Q ss_pred             EEEEeecCCCceeEEEECcCCCeE-EEecCCCceEeeecch
Q psy14961        256 RVNHLMGHENRVSCLQVSPDGTAF-SSGSWDTTLRDEESKN  295 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~~~~~l-~s~s~D~~ir~~~~~~  295 (320)
                      .+..+..+.. ...++++|||+++ +++..|.++.+|+.+.
T Consensus       250 v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k  289 (441)
T d1qnia2         250 FTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDK  289 (441)
T ss_dssp             SEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred             eEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence            4444444333 5789999999975 6778999999999754

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.84  E-value=1.6e-05  Score=65.89  Aligned_cols=237  Identities=12%  Similarity=0.069  Sum_probs=131.4

Q ss_pred             cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC----CeEEEEECC
Q psy14961         20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD----CTCALWDVE   95 (320)
Q Consensus        20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~v~iwd~~   95 (320)
                      ..+-.++|+++|++.++-...+.|..|+.+...    ..............+.+.+++..+++...+    +.+...+..
T Consensus        40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~----~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~  115 (319)
T d2dg1a1          40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE----IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN  115 (319)
T ss_dssp             CCEEEEEECTTSCEEEEETTTCEEEEECTTTCC----EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred             cCcEeCEECCCCCEEEEECCCCEEEEEECCCCe----EEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence            345688999999987777778887777543211    111122233445678888888776665432    334444554


Q ss_pred             CcceeeecccCc--cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961         96 SSQLLQSFHGHT--GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus        96 ~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      +...........  .....+.  ..++|++.++-.....                     ....+.+..++.... .+..
T Consensus       116 ~~~~~~~~~~~~~~~~~nd~~--~d~~G~l~vtd~~~~~---------------------~~~~g~v~~~~~dg~-~~~~  171 (319)
T d2dg1a1         116 GDNLQDIIEDLSTAYCIDDMV--FDSKGGFYFTDFRGYS---------------------TNPLGGVYYVSPDFR-TVTP  171 (319)
T ss_dssp             SCSCEEEECSSSSCCCEEEEE--ECTTSCEEEEECCCBT---------------------TBCCEEEEEECTTSC-CEEE
T ss_pred             CceeeeeccCCCcccCCccee--EEeccceeeccccccc---------------------ccCcceeEEEecccc-eeEE
Confidence            444332222111  1223333  3556664443211100                     001111222221111 1111


Q ss_pred             ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCee-EeEE-----ecCcceeeeEEEEEecCCcEEEEEeCCCeE
Q psy14961        174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKE-VACY-----KKDSILFGATSVDFSVSGRLLFAGYNDYTI  246 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~-~~~~-----~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v  246 (320)
                      +...-...+.++|+|+++.| ++-+..+.|..|++..... ....     ...........++++++|++.++....+.|
T Consensus       172 ~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V  251 (319)
T d2dg1a1         172 IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV  251 (319)
T ss_dssp             EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE
T ss_pred             EeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEE
Confidence            11111235789999999876 5556788999999864321 1110     111111224568899999988888899999


Q ss_pred             EEEcCCCCeEEEEee------cCCCceeEEEECcCCCeEEEecCC
Q psy14961        247 NVWDSLKCCRVNHLM------GHENRVSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       247 ~~wd~~~~~~~~~~~------~h~~~i~~i~~s~~~~~l~s~s~D  285 (320)
                      ..||. .++.+.++.      ++...+++++|.|++..|+..+.|
T Consensus       252 ~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~  295 (319)
T d2dg1a1         252 LVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  295 (319)
T ss_dssp             EEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             EEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcCC
Confidence            99995 566666553      344568899999988777666543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.80  E-value=5.8e-06  Score=70.02  Aligned_cols=232  Identities=13%  Similarity=0.067  Sum_probs=119.1

Q ss_pred             EEEec--CCCeEEEEEecccCCccccccc-ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc-ceeeec-ccCcc
Q psy14961         34 VASGG--LDNKVTVYAIALEDDSSAKKKT-VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS-QLLQSF-HGHTG  108 (320)
Q Consensus        34 l~s~~--~dg~i~v~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~-~~~~~  108 (320)
                      |+.|+  .++.|.++.++.+......... .......+.-+.++++++.|+++.. +.+..|.+... ...... .....
T Consensus         5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_           5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCC
Confidence            44443  3456777766543222111111 1122334556889999999988764 56777766432 222111 11111


Q ss_pred             ceeEEEEeeCCCCCEEE--EEe-CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC-C---eeeeee-cCCCCC
Q psy14961        109 ELMDLDLAPSETGNTFV--SGS-SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT-G---YCVQSF-EGHQSD  180 (320)
Q Consensus       109 ~v~~~~~~~~~~~~~l~--s~~-~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-~---~~~~~~-~~~~~~  180 (320)
                      ....+  +.+++++.++  ++. ..+.+..+.+...               .+...++.+.. +   ...... .....-
T Consensus        84 ~p~~v--~~~~~~~~~~v~~a~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~q~~~h  146 (365)
T d1jofa_          84 HPRAN--DADTNTRAIFLLAAKQPPYAVYANPFYKF---------------AGYGNVFSVSETGKLEKNVQNYEYQENTG  146 (365)
T ss_dssp             SGGGG--CTTSCCEEEEEEECSSTTCCEEEEEESSS---------------CCEEEEEEECTTCCEEEEEEEEECCTTCC
T ss_pred             CcEEE--EECCCCCEEEEEEecCCCCEEEEeEccCC---------------CCcceeEeeeecceecCcccCcccCCCCc
Confidence            12222  3355565433  222 2344544433211               11111111111 0   011111 112234


Q ss_pred             eEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeE---EecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCe
Q psy14961        181 VNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVAC---YKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCC  255 (320)
Q Consensus       181 v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~  255 (320)
                      +.++.|+|+|++++++.. ...|.+|+......+..   ........+...+.|+|+++++++.. .+++|.+|+.....
T Consensus       147 ~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~  226 (365)
T d1jofa_         147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             ceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence            789999999998877754 45788887654332221   11111223567899999999886665 57899999865432


Q ss_pred             --EEE---Eee--------------cCCCceeEEEECcCCCeEEEec
Q psy14961        256 --RVN---HLM--------------GHENRVSCLQVSPDGTAFSSGS  283 (320)
Q Consensus       256 --~~~---~~~--------------~h~~~i~~i~~s~~~~~l~s~s  283 (320)
                        ...   ...              .+......|.++|||++|+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             ceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEc
Confidence              111   110              1223456899999999987764

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.70  E-value=2.2e-06  Score=68.97  Aligned_cols=195  Identities=10%  Similarity=0.079  Sum_probs=117.0

Q ss_pred             EEEEecCCCCEEEEE-eCCCeEEEEECCCcceee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961         69 SCCIFPNSDQQILTG-SGDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS  146 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~  146 (320)
                      ..+++.+++..+++. +..+.+..++........ ...+ ......+++  +++++.+++....+.+++++-..+..   
T Consensus        17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~gvav--~~~g~i~v~d~~~~~i~~~~~~~~~~---   90 (260)
T d1rwia_          17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNG-LYQPQGLAV--DGAGTVYVTDFNNRVVTLAAGSNNQT---   90 (260)
T ss_dssp             EEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCS-CCSCCCEEE--CTTCCEEEEETTTEEEEECTTCSCCE---
T ss_pred             CEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCC-ccCceEEEE--cCCCCEEEeeeeeceeeeeeecccee---
Confidence            567788888766654 445677777655433222 1111 122334554  44666655555444454443322211   


Q ss_pred             eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961        147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT  226 (320)
Q Consensus       147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  226 (320)
                                              +.... .......+++.++++++++-..+..+..++....... ..... ......
T Consensus        91 ------------------------~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~-~~~~~-~~~~p~  143 (260)
T d1rwia_          91 ------------------------VLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFT-GLNDPD  143 (260)
T ss_dssp             ------------------------ECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE-ECCCC-SCCSCC
T ss_pred             ------------------------eeeee-eeeecccccccccceeEeeccccccccccccccceee-eeeec-ccCCcc
Confidence                                    11111 1234678999999998877777777878776543321 11111 112346


Q ss_pred             EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961        227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR  296 (320)
Q Consensus       227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~  296 (320)
                      .++++|++.++++...++.|..+|.............-.....|++.++|+++++....+.|..++....
T Consensus       144 ~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~  213 (260)
T d1rwia_         144 GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST  213 (260)
T ss_dssp             EEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCS
T ss_pred             eeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCC
Confidence            7889999998888888889999997655444333345566789999999999999888888887765433

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.67  E-value=1.3e-05  Score=64.95  Aligned_cols=201  Identities=11%  Similarity=0.142  Sum_probs=122.5

Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCc------cceeEEEEeeCCCCCEEEE-EeCCCeEEEEeCCCC
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHT------GELMDLDLAPSETGNTFVS-GSSDKLVNIWDMRTG  141 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~l~s-~~~dg~i~lwd~~~~  141 (320)
                      ..+++.++++.+++-..++.|++||.+ +..+..+....      ..-..+.+... .+..+++ .+.++.|..++.. +
T Consensus        26 ~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~-g  102 (279)
T d1q7fa_          26 SGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRN-SGDIIVTERSPTHQIQIYNQY-G  102 (279)
T ss_dssp             EEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETT-TTEEEEEECGGGCEEEEECTT-S
T ss_pred             cEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCccccccccccccccc-ccccceeccCCcccccccccc-c
Confidence            567777778776666667899999965 55554442110      11122332222 2223322 2233445544432 2


Q ss_pred             cEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc
Q psy14961        142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       142 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~  221 (320)
                      .....+.                          .........+++.++|..+++....+.+.+++... +.+..+.....
T Consensus       103 ~~~~~~~--------------------------~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g-~~~~~~g~~~~  155 (279)
T d1q7fa_         103 QFVRKFG--------------------------ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKH  155 (279)
T ss_dssp             CEEEEEC--------------------------TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTT
T ss_pred             cceeecC--------------------------CCcccccceeccccCCcEEEEeeccceeeEeccCC-ceeeccccccc
Confidence            2221110                          11233467899999999888888888888888653 44444433333


Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee--cCCCceeEEEECcCCCeEEEecC-CCceEeeecchHhh
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM--GHENRVSCLQVSPDGTAFSSGSW-DTTLRDEESKNRYV  298 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~-D~~ir~~~~~~~~~  298 (320)
                      ......+++.+++.++++....+.|.+||.. +..+.++.  ++......|++.|+|+++++-+. +..|.+++....++
T Consensus       156 ~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~  234 (279)
T d1q7fa_         156 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLI  234 (279)
T ss_dssp             CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEE
T ss_pred             ccccceeeeccceeEEeeeccccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCEE
Confidence            3345678889999988888889999999964 44555552  34556789999999998887654 45788888655544


Q ss_pred             hh
Q psy14961        299 QY  300 (320)
Q Consensus       299 ~~  300 (320)
                      ..
T Consensus       235 ~~  236 (279)
T d1q7fa_         235 SA  236 (279)
T ss_dssp             EE
T ss_pred             EE
Confidence            33

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.59  E-value=1.7e-05  Score=65.07  Aligned_cols=197  Identities=13%  Similarity=0.083  Sum_probs=114.6

Q ss_pred             eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC
Q psy14961         17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES   96 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~   96 (320)
                      .....+.+++|+++|+++++...++.+..++............ ..........+.+.+++..+++.+.++.+..++...
T Consensus        65 ~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~  143 (302)
T d2p4oa1          65 TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL-TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ  143 (302)
T ss_dssp             ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE-ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred             cCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeecc-ccCCccccceeEEccCCCEEeeccccccceeeeccC
Confidence            3446789999999999999888888888887643222111111 112234466778888887777777788888888776


Q ss_pred             cceeeecc--------cCc--cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECc
Q psy14961         97 SQLLQSFH--------GHT--GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMR  166 (320)
Q Consensus        97 ~~~~~~~~--------~~~--~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~  166 (320)
                      +.......        .+.  .....+.  ++. +..+++.+..+.|..++........                     
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~ngi~--~~~-~~l~~~~~~~~~i~~~~~~~~~~~~---------------------  199 (302)
T d2p4oa1         144 PSGSIWLEHPMLARSNSESVFPAANGLK--RFG-NFLYVSNTEKMLLLRIPVDSTDKPG---------------------  199 (302)
T ss_dssp             TEEEEEEECGGGSCSSTTCCSCSEEEEE--EET-TEEEEEETTTTEEEEEEBCTTSCBC---------------------
T ss_pred             CcceeEecCCccceeeccCccccccccc--ccC-CceeeecCCCCeEEecccccccccc---------------------
Confidence            54321111        011  1122232  221 2344455556666666654321100                     


Q ss_pred             CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE---ecCCcEEEEEeCC
Q psy14961        167 TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF---SVSGRLLFAGYND  243 (320)
Q Consensus       167 ~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~l~~g~~d  243 (320)
                      ......    .......++++++|+.+++...++.|..++.... ..............++++|   ++|++.|+.++..
T Consensus       200 ~~~~~~----~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~-~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         200 EPEIFV----EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS-TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             CCEEEE----ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC-EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             cccccc----CCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC-EEEEEecCCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence            000000    1112356999999998888888999999987643 3222332223334678999   6788888776654

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.48  E-value=0.00015  Score=57.62  Aligned_cols=201  Identities=11%  Similarity=0.090  Sum_probs=107.2

Q ss_pred             ccccccCeEEEEecCCCCEEEEEeCC-C--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-CeEEEE
Q psy14961         61 VATHTSFISCCIFPNSDQQILTGSGD-C--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-KLVNIW  136 (320)
Q Consensus        61 ~~~h~~~v~~~~~~~~~~~l~s~~~d-g--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g~i~lw  136 (320)
                      +..+...+.+-.|+|+|+.|+..... +  .+.+.+..++.... +..+.+......+  +++|..++..... +...++
T Consensus        34 l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--spdg~~i~~~~~~~~~~~~~  110 (269)
T d2hqsa1          34 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAF--SPDGSKLAFALSKTGSLNLY  110 (269)
T ss_dssp             EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSSCEEEEEE--CTTSSEEEEEECTTSSCEEE
T ss_pred             EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE-Eeeeeccccccee--cCCCCeeeEeeecCCcccee
Confidence            44455677888999999999865443 2  45555666554433 3334555554544  5677777654432 211111


Q ss_pred             eCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEE-EeeCCCe--EEEEECCCCeeE
Q psy14961        137 DMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA-TGSDDAT--CRLFDLRADKEV  213 (320)
Q Consensus       137 d~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~--i~iwd~~~~~~~  213 (320)
                      ..                         ......... ............++++++.++ +...++.  |.+.++..+...
T Consensus       111 ~~-------------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~  164 (269)
T d2hqsa1         111 VM-------------------------DLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ  164 (269)
T ss_dssp             EE-------------------------ETTTCCEEE-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE
T ss_pred             ec-------------------------cccccccee-eeeccccccccccccccccceecccccCCceEeeeecccccce
Confidence            11                         111111111 111222334556777766554 4444554  555566554332


Q ss_pred             eEEecCcceeeeEEEEEecCCcEEEEEeCC-CeEE--EEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC---Cc
Q psy14961        214 ACYKKDSILFGATSVDFSVSGRLLFAGYND-YTIN--VWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD---TT  287 (320)
Q Consensus       214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-g~v~--~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D---~~  287 (320)
                      .....   ........++|+++.++..+.+ +...  +.|......  +...+........|||||+.|+-.+..   ..
T Consensus       165 ~~~~~---~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~  239 (269)
T d2hqsa1         165 RITWE---GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSV  239 (269)
T ss_dssp             ECCCS---SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred             eeecc---cccccccccccccceeEEEeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcE
Confidence            21111   1223567799999988877643 3444  445544433  234455566788999999998755432   34


Q ss_pred             eEeeecch
Q psy14961        288 LRDEESKN  295 (320)
Q Consensus       288 ir~~~~~~  295 (320)
                      |.+++...
T Consensus       240 l~~~~~dg  247 (269)
T d2hqsa1         240 LNLVSTDG  247 (269)
T ss_dssp             EEEEETTS
T ss_pred             EEEEECCC
Confidence            55666533

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.43  E-value=0.00027  Score=58.08  Aligned_cols=203  Identities=8%  Similarity=0.094  Sum_probs=109.3

Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc-cccccc-ccCeEEEEecCCCCEEEEEeC---------------
Q psy14961         23 MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK-KTVATH-TSFISCCIFPNSDQQILTGSG---------------   85 (320)
Q Consensus        23 ~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-~~~~~h-~~~v~~~~~~~~~~~l~s~~~---------------   85 (320)
                      ..++|+++++.++.+...+.+..++.+..  ..... ....+. ......+.+.+++...++-..               
T Consensus        74 ~Gl~~~~dg~~l~vad~~~~i~~~~~~g~--~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~  151 (314)
T d1pjxa_          74 AGCQCDRDANQLFVADMRLGLLVVQTDGT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK  151 (314)
T ss_dssp             EEEEECSSSSEEEEEETTTEEEEEETTSC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred             eeEEEeCCCCEEEEEECCCeEEEEeCCCc--EEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccC
Confidence            47899999998877776667777765421  11110 011111 112345777777766665321               


Q ss_pred             CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC--EE-EEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEE
Q psy14961         86 DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN--TF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNI  162 (320)
Q Consensus        86 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~i  162 (320)
                      +|.|..++.+ ++...... .-..-..+++.+..++.  .| ++-+..+.|..||+.....+..                
T Consensus       152 ~G~v~~~~~d-g~~~~~~~-~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~----------------  213 (314)
T d1pjxa_         152 FGSIYCFTTD-GQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN----------------  213 (314)
T ss_dssp             CEEEEEECTT-SCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE----------------
T ss_pred             CceEEEEeec-CceeEeeC-CcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccce----------------
Confidence            2234444432 22221111 11122456666543322  33 3345556666666532211110                


Q ss_pred             EECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE-EEEE
Q psy14961        163 WDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL-LFAG  240 (320)
Q Consensus       163 wd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-l~~g  240 (320)
                           .+....+.+ +......+++.++|+.+++....+.|.+||...++....+....  ...+.++|.|+++. .++.
T Consensus       214 -----~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~--~~~t~~afg~d~~~lyVt~  286 (314)
T d1pjxa_         214 -----KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF--EKPSNLHFKPQTKTIFVTE  286 (314)
T ss_dssp             -----EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS--SCEEEEEECTTSSEEEEEE
T ss_pred             -----eeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCC--CCEEEEEEeCCCCEEEEEE
Confidence                 000111111 12234679999999988888888999999988765544443322  13567999999974 4556


Q ss_pred             eCCCeEEEEcCC
Q psy14961        241 YNDYTINVWDSL  252 (320)
Q Consensus       241 ~~dg~v~~wd~~  252 (320)
                      +.+|.|.-.++.
T Consensus       287 ~~~g~i~~~~~~  298 (314)
T d1pjxa_         287 HENNAVWKFEWQ  298 (314)
T ss_dssp             TTTTEEEEEECS
T ss_pred             CCCCcEEEEECC
Confidence            677888877754

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=0.00011  Score=63.91  Aligned_cols=234  Identities=13%  Similarity=0.079  Sum_probs=124.8

Q ss_pred             CeEeecccceeEEEEEe---CccceEEEEEcCCCCEEEEec---------CCCeEEEEEecccCCcccccccccccccCe
Q psy14961          1 MIIWDGLTQTKEHSVTM---PATWVMACAYAPSGSVVASGG---------LDNKVTVYAIALEDDSSAKKKTVATHTSFI   68 (320)
Q Consensus         1 ~~~W~~~~~~~~~~~~~---~~~~V~~~~~~~~~~~l~s~~---------~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v   68 (320)
                      |.+||..+++...-+..   ....+....||||+++|+.+.         ..+.+.+||+.....  ............+
T Consensus        39 i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~--~~l~~~~~~~~~l  116 (465)
T d1xfda1          39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKL  116 (465)
T ss_dssp             EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCC
T ss_pred             EEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCce--eeccCccCCcccc
Confidence            35677776665332222   222466778999999887753         357788888854321  1111122223345


Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecc-cCcccee---------------EEEEeeCCCCCEEEEEeC-CC
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELM---------------DLDLAPSETGNTFVSGSS-DK  131 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~---------------~~~~~~~~~~~~l~s~~~-dg  131 (320)
                      ....|+|+|+.++-.. ++.+.+.+..++..++... +....+.               .-++-.+|||+.|+.... +.
T Consensus       117 ~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s  195 (465)
T d1xfda1         117 QYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS  195 (465)
T ss_dssp             SBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred             ceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEeccc
Confidence            5577899999887765 6788888876665443221 1111110               123334778999987653 33


Q ss_pred             eEEEEeCCC--Cc---EEEEeccC-CccccCCCeEEEEECcCCeeeeee------cCCCCCeEEEEEcCCCCEEEEe-eC
Q psy14961        132 LVNIWDMRT--GY---CVQSFEGH-HNLITDDKLVNIWDMRTGYCVQSF------EGHQSDVNSVKFHPSGDAVATG-SD  198 (320)
Q Consensus       132 ~i~lwd~~~--~~---~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~v~~v~~~p~g~~l~s~-s~  198 (320)
                      .+..+.+..  +.   ....+.-. .........+.++|+..+......      .....-+..+.|+|+++.++.. .+
T Consensus       196 ~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR  275 (465)
T d1xfda1         196 RVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR  275 (465)
T ss_dssp             TSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET
T ss_pred             ccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEcc
Confidence            444444321  10   11111100 000112335778888765432211      1122246789999998866543 22


Q ss_pred             C---CeEEEEECCCCeeEeEEecCcce---eeeEEEEEecCCcEE
Q psy14961        199 D---ATCRLFDLRADKEVACYKKDSIL---FGATSVDFSVSGRLL  237 (320)
Q Consensus       199 d---g~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~l  237 (320)
                      +   ..+.++|..+++....+......   .......|+|+|+.+
T Consensus       276 ~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~  320 (465)
T d1xfda1         276 AQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF  320 (465)
T ss_dssp             TSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSE
T ss_pred             ccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCee
Confidence            2   25788899888765444322111   011245689999844

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.26  E-value=0.0007  Score=55.58  Aligned_cols=196  Identities=9%  Similarity=0.018  Sum_probs=113.1

Q ss_pred             EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC----CeEEEEeCCCCcEE
Q psy14961         69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----KLVNIWDMRTGYCV  144 (320)
Q Consensus        69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~lwd~~~~~~~  144 (320)
                      -.+.|.++++.+++-...+.|..|+++++.....+.........+++  .++|+++++...+    +.+...+...+...
T Consensus        43 EG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~--~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          43 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKI--HKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEE--CTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             EeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEE--CCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            46778888886666667889999998877655444334444555555  5567766654332    22322332222111


Q ss_pred             EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC------CCeEEEEECCCCeeEeEEec
Q psy14961        145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD------DATCRLFDLRADKEVACYKK  218 (320)
Q Consensus       145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~------dg~i~iwd~~~~~~~~~~~~  218 (320)
                      ....                         -..-....+.+++.|+|+..++-..      .+.+..++............
T Consensus       121 ~~~~-------------------------~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~  175 (319)
T d2dg1a1         121 DIIE-------------------------DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN  175 (319)
T ss_dssp             EEEC-------------------------SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred             eecc-------------------------CCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeec
Confidence            1000                         0011234678999999987666432      22355555443322111111


Q ss_pred             CcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCC----eEEEE----eecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961        219 DSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKC----CRVNH----LMGHENRVSCLQVSPDGTAFSSGSWDTTLR  289 (320)
Q Consensus       219 ~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~----~~~~~----~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir  289 (320)
                         ......++|+|+++.|+.+ +..+.|..||+...    .....    ........-.|++.++|++.++....+.|+
T Consensus       176 ---~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~  252 (319)
T d2dg1a1         176 ---ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVL  252 (319)
T ss_dssp             ---ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred             ---cceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEE
Confidence               1224678999999876555 56789999975421    11111    111223457899999999989888889999


Q ss_pred             eeecc
Q psy14961        290 DEESK  294 (320)
Q Consensus       290 ~~~~~  294 (320)
                      +++..
T Consensus       253 ~~~p~  257 (319)
T d2dg1a1         253 VFNKR  257 (319)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            88853

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.11  E-value=0.0014  Score=53.12  Aligned_cols=222  Identities=16%  Similarity=0.163  Sum_probs=122.5

Q ss_pred             EEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961         25 CAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF  103 (320)
Q Consensus        25 ~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  103 (320)
                      ..|++ ++.+..+=-..+.|.-||.....     .. .......+.++.+.+++.+++ ++.+ .+..+|..+++.....
T Consensus        23 p~wd~~~~~l~wvDi~~~~I~r~d~~~g~-----~~-~~~~~~~~~~i~~~~dg~l~v-a~~~-gl~~~d~~tg~~~~l~   94 (295)
T d2ghsa1          23 PTFDPASGTAWWFNILERELHELHLASGR-----KT-VHALPFMGSALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHA   94 (295)
T ss_dssp             EEEETTTTEEEEEEGGGTEEEEEETTTTE-----EE-EEECSSCEEEEEEEETTEEEE-EETT-EEEEEETTTCCEEEEE
T ss_pred             CeEECCCCEEEEEECCCCEEEEEECCCCe-----EE-EEECCCCcEEEEEecCCCEEE-EEeC-ccEEeecccceeeEEe
Confidence            45776 44444444455777777754221     11 111234567777777665544 5555 5888999887653322


Q ss_pred             c--cCcc--ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCC
Q psy14961        104 H--GHTG--ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQS  179 (320)
Q Consensus       104 ~--~~~~--~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~  179 (320)
                      .  ....  ....+  ..+++|++.++...+..                       ..+.-.+|.+..++......+ -.
T Consensus        95 ~~~~~~~~~~~nd~--~vd~~G~iw~~~~~~~~-----------------------~~~~g~l~~~~~g~~~~~~~~-~~  148 (295)
T d2ghsa1          95 ELESDLPGNRSNDG--RMHPSGALWIGTMGRKA-----------------------ETGAGSIYHVAKGKVTKLFAD-IS  148 (295)
T ss_dssp             CSSTTCTTEEEEEE--EECTTSCEEEEEEETTC-----------------------CTTCEEEEEEETTEEEEEEEE-ES
T ss_pred             eeecCCCcccceee--EECCCCCEEEEeccccc-----------------------cccceeEeeecCCcEEEEeec-cC
Confidence            1  1111  22333  33556765444321110                       001112222233322222221 12


Q ss_pred             CeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCee------EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961        180 DVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKE------VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL  252 (320)
Q Consensus       180 ~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~  252 (320)
                      .-+.++|+|+++.+ ++-+..+.|..++++....      ...............++++.+|.+.++....+.|..||. 
T Consensus       149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-  227 (295)
T d2ghsa1         149 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-  227 (295)
T ss_dssp             SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-
T ss_pred             CcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-
Confidence            35789999999866 5666788899888753211      111111111223456888999999988888999999995 


Q ss_pred             CCeEEEEeecCCCceeEEEEC-cCCCeEEE
Q psy14961        253 KCCRVNHLMGHENRVSCLQVS-PDGTAFSS  281 (320)
Q Consensus       253 ~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s  281 (320)
                      .++.+..+.-....+++++|- ||.+.|..
T Consensus       228 ~G~~~~~i~lP~~~~T~~~FGG~d~~~Lyv  257 (295)
T d2ghsa1         228 DGNHIARYEVPGKQTTCPAFIGPDASRLLV  257 (295)
T ss_dssp             TCCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred             CCcEeeEecCCCCceEEEEEeCCCCCEEEE
Confidence            466666665555679999996 67655443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.1e-05  Score=68.72  Aligned_cols=105  Identities=11%  Similarity=0.046  Sum_probs=66.9

Q ss_pred             CeEEEEEcCCCCEEEEee---------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        180 DVNSVKFHPSGDAVATGS---------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      .+....||||+++++...         ..+.+.++|+.++..............+....|||||+.||-.. ++.|.+.+
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~  140 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCA  140 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEES
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEe
Confidence            456788999999887653         35678899998776433222211111233467999999998876 55777777


Q ss_pred             CCCCeEEE-EeecCCCc-----------------eeEEEECcCCCeEEEecCC
Q psy14961        251 SLKCCRVN-HLMGHENR-----------------VSCLQVSPDGTAFSSGSWD  285 (320)
Q Consensus       251 ~~~~~~~~-~~~~h~~~-----------------i~~i~~s~~~~~l~s~s~D  285 (320)
                      ...+.... +..+-.+.                 -.++.|||||+.||....|
T Consensus       141 ~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D  193 (465)
T d1xfda1         141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (465)
T ss_dssp             SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             cCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEec
Confidence            65443221 11111111                 1578899999999988643

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.93  E-value=0.0023  Score=50.55  Aligned_cols=216  Identities=9%  Similarity=-0.024  Sum_probs=107.3

Q ss_pred             EcCC--CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CC-----CeEEEEECCCcc
Q psy14961         27 YAPS--GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GD-----CTCALWDVESSQ   98 (320)
Q Consensus        27 ~~~~--~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d-----g~v~iwd~~~~~   98 (320)
                      .+||  |+.|+-.+ +|.|.++++...     ....+..+.+.+....|+|+|+.|+... .+     ..|.+++..+++
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g-----~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~   79 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSG-----STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE   79 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTC-----CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCC-----CEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence            5788  88887765 456777666421     1233555666778889999999887543 22     236666777765


Q ss_pred             eeeeccc------CccceeEEEEeeCCCCCEEEEEeCC------CeEEEEeCCCCcEEEEeccCC-ccccCCCeE-----
Q psy14961         99 LLQSFHG------HTGELMDLDLAPSETGNTFVSGSSD------KLVNIWDMRTGYCVQSFEGHH-NLITDDKLV-----  160 (320)
Q Consensus        99 ~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~~~d------g~i~lwd~~~~~~~~~~~~~~-~~~~~d~~i-----  160 (320)
                      ..+....      .........+  +++|+.++.....      ..+...+...+.......+.. .....++..     
T Consensus        80 ~~~lt~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (281)
T d1k32a2          80 IKRITYFSGKSTGRRMFTDVAGF--DPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRN  157 (281)
T ss_dssp             EEECCCCCEEEETTEECSEEEEE--CTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEES
T ss_pred             eEEeeecCCCccCcccccccccc--CCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEee
Confidence            5432111      1112223334  5678877765332      224445544433221111100 001111111     


Q ss_pred             -----------------EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC--CCeEEEEECCCCeeEeEEecCcc
Q psy14961        161 -----------------NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD--DATCRLFDLRADKEVACYKKDSI  221 (320)
Q Consensus       161 -----------------~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~  221 (320)
                                       ............. ...........++++. .+.....  ...|.++|+.+++.... .....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~l-t~~~~  234 (281)
T d1k32a2         158 TFELPHWKGYRGGTRGKIWIEVNSGAFKKI-VDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRKH-TSFTD  234 (281)
T ss_dssp             CSCCTTSTTCCSTTCCEEEEEEETTEEEEE-ECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEEC-CCCCS
T ss_pred             ccccceeeeeccCCcceeeeeccccceeec-cCCccccceeeeeccc-cceecccccccceEEEeCCCCceEEe-ecCCC
Confidence                             1111111111111 1222334455566543 2222223  33577778876654322 22111


Q ss_pred             eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE
Q psy14961        222 LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV  257 (320)
Q Consensus       222 ~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~  257 (320)
                         .....|+|||+.|+... ++.|.++|+.+++..
T Consensus       235 ---~~~~~~SpDG~~I~f~~-~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         235 ---YYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE  266 (281)
T ss_dssp             ---SCEEEEEESSSCEEEEE-TTEEEEECTTTCCEE
T ss_pred             ---cccccCcCCCCEEEEEe-CCEEEEEECCCCCEE
Confidence               12345899999887744 678999998766543

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.63  E-value=0.0069  Score=50.35  Aligned_cols=94  Identities=14%  Similarity=0.199  Sum_probs=55.6

Q ss_pred             eEeecccceeEE--EEEeC-ccceEEEEEcCCCCEEEEecCC-CeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961          2 IIWDGLTQTKEH--SVTMP-ATWVMACAYAPSGSVVASGGLD-NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD   77 (320)
Q Consensus         2 ~~W~~~~~~~~~--~~~~~-~~~V~~~~~~~~~~~l~s~~~d-g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~   77 (320)
                      .+||..+++-..  ....+ .....+.++.++|.+++.|+.+ ..+.+||....  .......+...... .......++
T Consensus        55 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~--~w~~~~~~~~~r~~-~~~~~~~dG  131 (387)
T d1k3ia3          55 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVARGY-QSSATMSDG  131 (387)
T ss_dssp             EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSCCSS-CEEEECTTS
T ss_pred             EEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccC--cccccccccccccc-cceeeecCC
Confidence            378888776322  22222 2233466789999999998765 58999987532  22222222221112 233445677


Q ss_pred             CEEEEEeCC------CeEEEEECCCcc
Q psy14961         78 QQILTGSGD------CTCALWDVESSQ   98 (320)
Q Consensus        78 ~~l~s~~~d------g~v~iwd~~~~~   98 (320)
                      ..++.|+.+      ..+.+||+.+..
T Consensus       132 ~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         132 RVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             CEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             ceeeeccccccccccceeeeecCCCCc
Confidence            888887653      468899987764

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.35  E-value=0.024  Score=45.44  Aligned_cols=206  Identities=11%  Similarity=0.034  Sum_probs=109.3

Q ss_pred             EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccc--ccCeEEEEecCCCCEE
Q psy14961          3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH--TSFISCCIFPNSDQQI   80 (320)
Q Consensus         3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l   80 (320)
                      .||..+++.. .+.+ +..+.++++.++|.++++. .+ .+..+|......  .........  ......+...++|...
T Consensus        44 r~d~~~g~~~-~~~~-~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~--~~l~~~~~~~~~~~~nd~~vd~~G~iw  117 (295)
T d2ghsa1          44 ELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL--TLHAELESDLPGNRSNDGRMHPSGALW  117 (295)
T ss_dssp             EEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE--EEEECSSTTCTTEEEEEEEECTTSCEE
T ss_pred             EEECCCCeEE-EEEC-CCCcEEEEEecCCCEEEEE-eC-ccEEeeccccee--eEEeeeecCCCcccceeeEECCCCCEE
Confidence            3444444332 2233 3467888899999777654 44 477777643211  111111111  1234556777888766


Q ss_pred             EEEeC----CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCcccc
Q psy14961         81 LTGSG----DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNLIT  155 (320)
Q Consensus        81 ~s~~~----dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~  155 (320)
                      ++...    .+.-.+|.+..++....... -.....+++  +++++.++ +-+..+.|..+++....         ....
T Consensus       118 ~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~--s~d~~~l~~~dt~~~~I~~~~~d~~~---------~~~~  185 (295)
T d2ghsa1         118 IGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICF--SPDGTTGYFVDTKVNRLMRVPLDART---------GLPT  185 (295)
T ss_dssp             EEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEE--CTTSCEEEEEETTTCEEEEEEBCTTT---------CCBS
T ss_pred             EEeccccccccceeEeeecCCcEEEEeec-cCCcceeee--cCCCceEEEeecccceeeEeeecccc---------cccc
Confidence            65432    23445566555554333322 122234544  44566544 44556677777653211         0000


Q ss_pred             CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEe-cCC
Q psy14961        156 DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFS-VSG  234 (320)
Q Consensus       156 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s-~~~  234 (320)
                      ....+          ...+.+.......+++.++|++.++.-..+.|..||. .++.+..+.....  .+++++|- |+.
T Consensus       186 ~~~~~----------~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~--~~T~~~FGG~d~  252 (295)
T d2ghsa1         186 GKAEV----------FIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK--QTTCPAFIGPDA  252 (295)
T ss_dssp             SCCEE----------EEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS--BEEEEEEESTTS
T ss_pred             cceEE----------EeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCC--ceEEEEEeCCCC
Confidence            11110          1112223345678999999998888777889999995 4666666554322  35788886 676


Q ss_pred             cEEEE
Q psy14961        235 RLLFA  239 (320)
Q Consensus       235 ~~l~~  239 (320)
                      +.|+.
T Consensus       253 ~~Lyv  257 (295)
T d2ghsa1         253 SRLLV  257 (295)
T ss_dssp             CEEEE
T ss_pred             CEEEE
Confidence            65543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=0.025  Score=44.51  Aligned_cols=250  Identities=9%  Similarity=0.035  Sum_probs=133.6

Q ss_pred             CEEEEecCCCeEEEEEecccCCcc-cccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccc
Q psy14961         32 SVVASGGLDNKVTVYAIALEDDSS-AKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGE  109 (320)
Q Consensus        32 ~~l~s~~~dg~i~v~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~  109 (320)
                      ++|+-+.. +.|+-..++...... .....+..+...+..+.|....+.++-+. .++.|+..+++.......+......
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~   80 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence            34444443 456666664322111 11112233344566788877677777654 5678888888765443333222244


Q ss_pred             eeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961        110 LMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP  188 (320)
Q Consensus       110 v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p  188 (320)
                      +.++++...  +..|+ +-...+.|.+.++....+..                           .+.........++++|
T Consensus        81 p~~iAvD~~--~~~lY~~d~~~~~I~~~~~dg~~~~~---------------------------l~~~~l~~p~~l~vdp  131 (263)
T d1npea_          81 PEGIALDHL--GRTIFWTDSQLDRIEVAKMDGTQRRV---------------------------LFDTGLVNPRGIVTDP  131 (263)
T ss_dssp             EEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEE---------------------------EECSSCSSEEEEEEET
T ss_pred             ccEEEEecc--CCeEEEeccCCCEEEEEecCCceEEE---------------------------EecccccCCcEEEEec
Confidence            566666432  34554 33445567666664332110                           0111123467899999


Q ss_pred             CCCEEEEee-C--CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCC
Q psy14961        189 SGDAVATGS-D--DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHE  264 (320)
Q Consensus       189 ~g~~l~s~s-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~  264 (320)
                      ...+++-.. .  ...|.--+++........ ... ...+..+++++.+..|+... ..+.|...|.....+...+.+-.
T Consensus       132 ~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~-~~~-~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~  209 (263)
T d1npea_         132 VRGNLYWTDWNRDNPKIETSHMDGTNRRILA-QDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ  209 (263)
T ss_dssp             TTTEEEEEECCSSSCEEEEEETTSCCCEEEE-CTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC
T ss_pred             ccCcEEEeecCCCCcEEEEecCCCCCceeee-eec-ccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC
Confidence            777665332 2  223444455543322222 111 22346788998888776664 67789888876544433333323


Q ss_pred             CceeEEEECcCCCeEEEecCCCceEeeecc-hHhhhheeeeeeecCCcceEEE
Q psy14961        265 NRVSCLQVSPDGTAFSSGSWDTTLRDEESK-NRYVQYLLRSRITKPTQGLTVY  316 (320)
Q Consensus       265 ~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~-~~~~~~~~~~~~~~~~~~~~~~  316 (320)
                      . ..+|++. ++.++.+-...+.|..-+.. ....+.++.++..+|. ||+|.
T Consensus       210 ~-P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~-gi~v~  259 (263)
T d1npea_         210 Y-PFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLY-GITIA  259 (263)
T ss_dssp             S-EEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCC-CEEEE
T ss_pred             C-cEEEEEE-CCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcc-eEEEe
Confidence            3 3578775 45555665566777666653 2223445556666776 99885

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.10  E-value=0.052  Score=45.39  Aligned_cols=211  Identities=9%  Similarity=0.038  Sum_probs=121.3

Q ss_pred             CCCEEEEEe-CCCeEEEEECCCcceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961         76 SDQQILTGS-GDCTCALWDVESSQLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL  153 (320)
Q Consensus        76 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~  153 (320)
                      +|++++... .+.+|-+-|+.+.+..+...- .......+...+.++-.+++..+.+..= +  .+.+..+      ...
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP-~--pndg~~l------~d~  168 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETP-L--VNDGTNM------EDV  168 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEE-S--SCSSSST------TCG
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccc-c--CCCCccc------cch
Confidence            677877766 578999999988877553322 2334555555555556677777664320 0  0111100      000


Q ss_pred             ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---------------eEEEEEC-----------
Q psy14961        154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA---------------TCRLFDL-----------  207 (320)
Q Consensus       154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg---------------~i~iwd~-----------  207 (320)
                      ....+.+...|..+.+...++.-- .....++++|+|+++++.+.+.               .+.+++.           
T Consensus       169 ~~y~~~~t~ID~~tm~V~~QV~V~-g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk  247 (459)
T d1fwxa2         169 ANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD  247 (459)
T ss_dssp             G-EEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred             hhcceEEEEEecCCceEEEEeeeC-CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCC
Confidence            001133455677666655444321 2345788999999887766431               1233332           


Q ss_pred             ------------CCC--eeE-eEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCe------------EEEE
Q psy14961        208 ------------RAD--KEV-ACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCC------------RVNH  259 (320)
Q Consensus       208 ------------~~~--~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~------------~~~~  259 (320)
                                  +..  ..+ ...+..   -....+.++|||+++++++ -+.++.++|..+..            ...+
T Consensus       248 ~~eingV~VVD~~~~~~~~v~~yIPVp---KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e  324 (459)
T d1fwxa2         248 YQELNGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE  324 (459)
T ss_dssp             SEEETTEEEEECSGG--CSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC
T ss_pred             cEEeCCceeecccccCCcceeEEEecC---CCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEee
Confidence                        210  000 001111   1234578999999988776 58899999975311            1111


Q ss_pred             eecCCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhh
Q psy14961        260 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQY  300 (320)
Q Consensus       260 ~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~  300 (320)
                       ......-..-+|..+|....|-=-|..|--|+.+.....|
T Consensus       325 -~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~  364 (459)
T d1fwxa2         325 -PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAY  364 (459)
T ss_dssp             -CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred             -cccCcCccccccCCCceEEEEeeccceEEEEecchhhhhh
Confidence             1223455778999999877777799999999987776654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.08  E-value=0.083  Score=46.47  Aligned_cols=71  Identities=20%  Similarity=0.198  Sum_probs=43.9

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccce-eEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEe
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGEL-MDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~  147 (320)
                      +..++.++.|+.+.-.|.++++.+.......... ..+.-.|.--+..++.+..      +|.|.-+|+++|+.+..+
T Consensus       115 ~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  192 (571)
T d2ad6a1         115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA  192 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             CCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEE
Confidence            4578888899999999999998876543211000 0000000001245666553      678999999999887654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.04  E-value=0.091  Score=46.18  Aligned_cols=75  Identities=17%  Similarity=0.094  Sum_probs=44.3

Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-CCCceeEEEECcCCCe
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-HENRVSCLQVSPDGTA  278 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~i~~i~~s~~~~~  278 (320)
                      .+.-+|+.+++.+-.+.......+   -.++-.+.++++|+.||.++.+|..+++.+=++.- ....-.-+.|..||++
T Consensus       445 ~l~AiD~~TG~~~W~~~~~~~~~~---g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         445 QIRAFDLTTGKAKWTKWEKFAAWG---GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cEEEeccCCCceeeEcCCCCCCCc---ceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            455566666665544333221111   11222466788899999999999999988855532 1111223666678875

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.95  E-value=0.054  Score=42.12  Aligned_cols=53  Identities=8%  Similarity=0.001  Sum_probs=34.2

Q ss_pred             CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961        158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV  213 (320)
Q Consensus       158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~  213 (320)
                      ..|.++|+..+...+........+  ..|+|+|+.|+.. .++.|.++|+.+++..
T Consensus       214 ~~l~~~d~~g~~~~~lt~~~~~~~--~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         214 GQIYSTDLDGKDLRKHTSFTDYYP--RHLNTDGRRILFS-KGGSIYIFNPDTEKIE  266 (281)
T ss_dssp             CEEEEEETTSCSCEECCCCCSSCE--EEEEESSSCEEEE-ETTEEEEECTTTCCEE
T ss_pred             cceEEEeCCCCceEEeecCCCccc--ccCcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence            457777876655433222222233  4689999987653 4688999999887653

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.29  E-value=0.24  Score=41.27  Aligned_cols=136  Identities=13%  Similarity=0.090  Sum_probs=79.2

Q ss_pred             CCeEEEEECcCCeeeeeecC-CCCCeEEEEEcC--CCCEEEEeeCCC------------------eEEEEECCCCeeEeE
Q psy14961        157 DKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHP--SGDAVATGSDDA------------------TCRLFDLRADKEVAC  215 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p--~g~~l~s~s~dg------------------~i~iwd~~~~~~~~~  215 (320)
                      +..|-+.|+++.++.+.+.- ....+..+...+  +-.|++..+++.                  .+..+|..+.+....
T Consensus       109 n~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~Q  188 (459)
T d1fwxa2         109 NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ  188 (459)
T ss_dssp             TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEEEE
T ss_pred             CceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCceEEEE
Confidence            44577778888877554322 233556666654  455777776633                  256678777665444


Q ss_pred             EecCcceeeeEEEEEecCCcEEEEEeCC---C------------eEEEE-----------------------cCCCC--e
Q psy14961        216 YKKDSILFGATSVDFSVSGRLLFAGYND---Y------------TINVW-----------------------DSLKC--C  255 (320)
Q Consensus       216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g------------~v~~w-----------------------d~~~~--~  255 (320)
                      ..-..   ....++++|+|+++++.+.+   +            .+.++                       |....  .
T Consensus       189 V~V~g---~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~  265 (459)
T d1fwxa2         189 VLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASS  265 (459)
T ss_dssp             EEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--C
T ss_pred             eeeCC---ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCc
Confidence            33322   23467899999998876532   1            12222                       22210  0


Q ss_pred             EEEEeecCCCceeEEEECcCCCeEEEec-CCCceEeeecch
Q psy14961        256 RVNHLMGHENRVSCLQVSPDGTAFSSGS-WDTTLRDEESKN  295 (320)
Q Consensus       256 ~~~~~~~h~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~~~  295 (320)
                      .+..+.+-......+.++|||++++.++ .+.++-+.|.++
T Consensus       266 ~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K  306 (459)
T d1fwxa2         266 LFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR  306 (459)
T ss_dssp             SSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred             ceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence            1111111223356789999999966555 688999999754

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.25  E-value=0.32  Score=42.39  Aligned_cols=72  Identities=17%  Similarity=0.213  Sum_probs=43.6

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCccc-eeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEec
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGE-LMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSFE  148 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~~  148 (320)
                      +..++.+..|+.+.-.|..+++++..+...... ...+...|.-....++.+..      .|.|.-+|.++|+.+-.+.
T Consensus       117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  195 (560)
T d1kv9a2         117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY  195 (560)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeee
Confidence            457888888999999999999887765432110 00010011001234555432      3679999999998876653

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=95.90  E-value=0.34  Score=39.48  Aligned_cols=125  Identities=16%  Similarity=0.146  Sum_probs=69.7

Q ss_pred             EeCccceEEEEEcCCCCEEEEecCC-----C------eEEEEEecccCCcccccccc-cccccCeEEEEecCCCCEEEEE
Q psy14961         16 TMPATWVMACAYAPSGSVVASGGLD-----N------KVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSDQQILTG   83 (320)
Q Consensus        16 ~~~~~~V~~~~~~~~~~~l~s~~~d-----g------~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~   83 (320)
                      .++...+.+.+...+|++++.|+.+     +      .+.+||....  ........ ..|........+..++..++.|
T Consensus        16 ~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~--~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~G   93 (387)
T d1k3ia3          16 DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG--IVSDRTVTVTKHDMFCPGISMDGNGQIVVTG   93 (387)
T ss_dssp             ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC--CBCCCEEEECSCCCSSCEEEECTTSCEEEEC
T ss_pred             CCCccccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCC--cEeecCCCCCCcccceeEEEEecCCcEEEee
Confidence            4455555666677889988887753     1      3667876432  22111111 1232333345567788888887


Q ss_pred             eCC-CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC------CeEEEEeCCCCcE
Q psy14961         84 SGD-CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD------KLVNIWDMRTGYC  143 (320)
Q Consensus        84 ~~d-g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d------g~i~lwd~~~~~~  143 (320)
                      +.+ ..+.+||+.+..-.. .......-.....+...+|+.++.|+.+      ..+.+||..+...
T Consensus        94 g~~~~~~~~yd~~~~~w~~-~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W  159 (387)
T d1k3ia3          94 GNDAKKTSLYDSSSDSWIP-GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  159 (387)
T ss_dssp             SSSTTCEEEEEGGGTEEEE-CCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             cCCCcceeEecCccCcccc-cccccccccccceeeecCCceeeeccccccccccceeeeecCCCCce
Confidence            655 689999998765432 1111111111112234568888887653      2477888776643

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.84  E-value=0.3  Score=38.56  Aligned_cols=196  Identities=17%  Similarity=0.194  Sum_probs=108.4

Q ss_pred             eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc----cCeEEEEecCCC
Q psy14961          2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT----SFISCCIFPNSD   77 (320)
Q Consensus         2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~   77 (320)
                      -|.|+++..++..+.+++ .|.=..|-.+. .|+-.. +..+..|+++.+..   ....+..|.    ..|-.-...++.
T Consensus        86 QiFnletK~klks~~~~e-~VvfWkWis~~-~L~lVT-~taVYHW~~~g~s~---P~k~fdR~~~L~~~QIInY~~d~~~  159 (327)
T d1utca2          86 QIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQ  159 (327)
T ss_dssp             EEEETTTTEEEEEEECSS-CCCEEEESSSS-EEEEEC-SSEEEEEESSSSCC---CEEEEECCGGGTTCEEEEEEECTTS
T ss_pred             EEEehhHhhhhceEEcCC-CcEEEEecCCC-EEEEEc-CCceEEEcccCCCC---chhhhhhcccccCceEEEEEECCCC
Confidence            377889888888888875 44444565554 344443 35799999854322   222232232    223333346666


Q ss_pred             CEEEEEe---C----CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEE-E---eCCCeEEEEeCCCCc----
Q psy14961         78 QQILTGS---G----DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVS-G---SSDKLVNIWDMRTGY----  142 (320)
Q Consensus        78 ~~l~s~~---~----dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~---~~dg~i~lwd~~~~~----  142 (320)
                      ++++..+   .    .|.+.+|..+.+ .-+.+++|-+.-..+.+.-.+....|++ +   ...+.+++-++....    
T Consensus       160 kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~  238 (327)
T d1utca2         160 KWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ  238 (327)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCC
T ss_pred             CEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCC
Confidence            7654321   2    367889998754 3456677755444333321221122332 2   223578888874321    


Q ss_pred             -----EEEEe-cc--------------CC---ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961        143 -----CVQSF-EG--------------HH---NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD  199 (320)
Q Consensus       143 -----~~~~~-~~--------------~~---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d  199 (320)
                           .+..+ .+              ..   ..++.-|.+++||++++.++..-+=-.+.|...+-+.+..-+++..++
T Consensus       239 ~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~  318 (327)
T d1utca2         239 PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK  318 (327)
T ss_dssp             CCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred             CCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCC
Confidence                 01100 00              00   123567899999999999987655455667666666655566666677


Q ss_pred             CeEEE
Q psy14961        200 ATCRL  204 (320)
Q Consensus       200 g~i~i  204 (320)
                      |.+..
T Consensus       319 GqVl~  323 (327)
T d1utca2         319 GQVLS  323 (327)
T ss_dssp             SEEEE
T ss_pred             CeEEE
Confidence            76543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=95.77  E-value=0.55  Score=40.98  Aligned_cols=70  Identities=16%  Similarity=0.210  Sum_probs=43.2

Q ss_pred             CCEEEEEeCCCeEEEEECCCcceeeecccCc---cceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEe
Q psy14961         77 DQQILTGSGDCTCALWDVESSQLLQSFHGHT---GELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~  147 (320)
                      +..++.+..|+.+.-.|..+++.+.......   ..+. +.-.|.--+..+++++.      .|.|..+|.++|+.+..+
T Consensus       128 ~~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  206 (573)
T d1kb0a2         128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW  206 (573)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             CCcEEEEecccceeeeccccccceecccCccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceeee
Confidence            3467888889999988999998876543211   1111 00000001245665543      467999999999887665

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.27  E-value=0.85  Score=39.93  Aligned_cols=76  Identities=13%  Similarity=0.049  Sum_probs=44.6

Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-CceeEEEECcCCCe
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-NRVSCLQVSPDGTA  278 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-~~i~~i~~s~~~~~  278 (320)
                      |.+.=||+.+++.+-.........+   -.++-.|.+++.|+.||.++.+|..+++.+=++.-.. ..-.=+.|..||++
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~g---g~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQ  529 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWG---GTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ  529 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ceEEEEeCCCCceecccCCCCCCcc---ceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEE
Confidence            3566666666665433322221111   1123357788889999999999999999885553211 11122455668875

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.63  Score=36.07  Aligned_cols=216  Identities=9%  Similarity=-0.000  Sum_probs=106.8

Q ss_pred             ccceEEEEEcCCCCEEEEec-CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCC
Q psy14961         19 ATWVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVES   96 (320)
Q Consensus        19 ~~~V~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~   96 (320)
                      ...+.+++|++..+.|.-+. ..+.|.-.+++...........+.........+++...++.|+.+ ...+.|.+.+++.
T Consensus        29 ~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g  108 (266)
T d1ijqa1          29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  108 (266)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCC
Confidence            34567899998777666553 455666555532111111111111222334456665445555554 4567899999876


Q ss_pred             cceeeecccCccceeEEEEeeCCCCCEEEEE-eCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961         97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSG-SSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE  175 (320)
Q Consensus        97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  175 (320)
                      ......+.........+++.|. .|..+.+- +..+.|...++.....                           .....
T Consensus       109 ~~~~~~~~~~~~~P~~l~vd~~-~g~ly~~~~~~~~~I~r~~~dGs~~---------------------------~~l~~  160 (266)
T d1ijqa1         109 VKRKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAKIKKGGLNGVDI---------------------------YSLVT  160 (266)
T ss_dssp             SSEEEEEECTTCCEEEEEEETT-TTEEEEEECSSSCEEEEEETTSCCE---------------------------EEEEC
T ss_pred             ceEEEEEcCCCCCcceEEEEcc-cCeEEEeccCCCcceeEeccCCCce---------------------------ecccc
Confidence            5543333333344566666553 23333332 1222343333322110                           00011


Q ss_pred             CCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961        176 GHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC  254 (320)
Q Consensus       176 ~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~  254 (320)
                      ..-...+.+++++.++.|+-+ ...+.|...++.................+..+++. .+.+..+-..++.|.-.+..++
T Consensus       161 ~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred             cccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCCC
Confidence            112345789999987776554 56788999998764433222222211123345544 2333344346677777776665


Q ss_pred             eEEEEeecC
Q psy14961        255 CRVNHLMGH  263 (320)
Q Consensus       255 ~~~~~~~~h  263 (320)
                      .....+...
T Consensus       240 ~~~~~~~~~  248 (266)
T d1ijqa1         240 SDVNLLAEN  248 (266)
T ss_dssp             CCCEEEECS
T ss_pred             cceEEEEcC
Confidence            444444433

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=94.78  E-value=1.2  Score=38.99  Aligned_cols=70  Identities=21%  Similarity=0.249  Sum_probs=45.6

Q ss_pred             CEEEEEeCCCeEEEEECCCcceeeecccCccce-eEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEe
Q psy14961         78 QQILTGSGDCTCALWDVESSQLLQSFHGHTGEL-MDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSF  147 (320)
Q Consensus        78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~  147 (320)
                      ..++.++.|+.+.-.|.++++++..+....... ..+.-.|.--++.++.++.      .|.|+-+|+++|+.+-.+
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~  198 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA  198 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEe
Confidence            468889999999999999999887664211100 0111111111356776653      488999999999987665

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=93.45  E-value=2.1  Score=36.95  Aligned_cols=76  Identities=13%  Similarity=0.109  Sum_probs=48.0

Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCCCe
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDGTA  278 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~~~  278 (320)
                      |.+.-+|+.+++.+-.++......+   -.++-.+.++++|+.||.++.+|..+++.+=++.-... .-.=+.|..||++
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~g---g~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkq  514 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNG---GTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ  514 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCC---ceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            4577788888877655544332221   11233567888899999999999999998855542211 1122566678874

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.28  E-value=2.3  Score=36.83  Aligned_cols=72  Identities=15%  Similarity=0.115  Sum_probs=44.8

Q ss_pred             eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC----CCceeEEEECcCC
Q psy14961        201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH----ENRVSCLQVSPDG  276 (320)
Q Consensus       201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h----~~~i~~i~~s~~~  276 (320)
                      .+.=||+.+++.+-.++......+   -..+-.|.++++|+.||.++.+|..+++.+=++.-.    ..+   +.|..||
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~p~~g---g~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P---~ty~~~G  531 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVSPWNG---GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP---STYMVDG  531 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETT
T ss_pred             cEEEeCCCCCceEeeecCCCCCCC---ceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccC---EEEEECC
Confidence            455566666665544333222111   112336778888999999999999999988655421    223   5566788


Q ss_pred             Ce
Q psy14961        277 TA  278 (320)
Q Consensus       277 ~~  278 (320)
                      ++
T Consensus       532 kQ  533 (573)
T d1kb0a2         532 RQ  533 (573)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.03  E-value=2.5  Score=36.63  Aligned_cols=81  Identities=20%  Similarity=0.258  Sum_probs=54.7

Q ss_pred             CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-
Q psy14961        157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-  235 (320)
Q Consensus       157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-  235 (320)
                      .+.+.-+|+.+++..-+.+.+. ++.+-.++-.|..+++|+.||.++-+|..+++.+-.++....... .-+.+..+|+ 
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~-~P~ty~~~G~q  542 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVS-PPITWEQDGEQ  542 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS-CCEEEEETTEE
T ss_pred             CCeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccc-cCEEEEECCEE
Confidence            4678889999998876665332 222112234567888899999999999999999877765443322 2255677885 


Q ss_pred             EEEE
Q psy14961        236 LLFA  239 (320)
Q Consensus       236 ~l~~  239 (320)
                      |++.
T Consensus       543 Yv~i  546 (582)
T d1flga_         543 YLGV  546 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.44  E-value=1.7  Score=33.35  Aligned_cols=245  Identities=9%  Similarity=-0.001  Sum_probs=125.4

Q ss_pred             EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcc----eeeecccCc
Q psy14961         33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQ----LLQSFHGHT  107 (320)
Q Consensus        33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~----~~~~~~~~~  107 (320)
                      +|+.+.. ..|+-.+++.....     .+......+..+.|....+.++-.. ..+.|.--+++...    ....+....
T Consensus         3 fLl~s~~-~~I~~~~l~~~~~~-----~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~   76 (266)
T d1ijqa1           3 YLFFTNR-HEVRKMTLDRSEYT-----SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI   76 (266)
T ss_dssp             EEEEECB-SSEEEEETTSCCCE-----EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             EEEEECC-CeEEEEECCCCcce-----eeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCC
Confidence            3444443 34777777533221     1222334556788877777776654 45666655554321    111111112


Q ss_pred             cceeEEEEeeCCCCCEEEEE-eCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE
Q psy14961        108 GELMDLDLAPSETGNTFVSG-SSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF  186 (320)
Q Consensus       108 ~~v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~  186 (320)
                      ..+..+++.+.  +..|+.+ ...+.|.+.++.......                           .+.........+++
T Consensus        77 ~~p~glAvD~~--~~~lY~~d~~~~~I~v~~~~g~~~~~---------------------------~~~~~~~~P~~l~v  127 (266)
T d1ijqa1          77 QAPDGLAVDWI--HSNIYWTDSVLGTVSVADTKGVKRKT---------------------------LFRENGSKPRAIVV  127 (266)
T ss_dssp             SCCCEEEEETT--TTEEEEEETTTTEEEEEETTSSSEEE---------------------------EEECTTCCEEEEEE
T ss_pred             CCcceEEEeec--cceEEEEecCCCEEEeEecCCceEEE---------------------------EEcCCCCCcceEEE
Confidence            33445555332  3344433 344566666665432211                           11122234678899


Q ss_pred             cCCCCEEEEe--eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCCeEEEEeec-
Q psy14961        187 HPSGDAVATG--SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKCCRVNHLMG-  262 (320)
Q Consensus       187 ~p~g~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~~~~~~~~-  262 (320)
                      +|...+|.-.  +..+.|.-.+++......... .. ...+..+++++.+..|+.+ ...+.|...+.....+...... 
T Consensus       128 d~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~-~~-~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~  205 (266)
T d1ijqa1         128 DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE  205 (266)
T ss_dssp             ETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT
T ss_pred             EcccCeEEEeccCCCcceeEeccCCCceecccc-cc-cceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCC
Confidence            9865555433  334567777776543332222 11 1234678899888777666 4567888888654332222222 


Q ss_pred             -CCCceeEEEECcCCCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEEE
Q psy14961        263 -HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVY  316 (320)
Q Consensus       263 -h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (320)
                       ......+|++. ++.++.+-..++.|...+....-....+..+...|. ||.|+
T Consensus       206 ~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~~~~~~~~~p~-~i~v~  258 (266)
T d1ijqa1         206 KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPE-DMVLF  258 (266)
T ss_dssp             TTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCC-CEEEE
T ss_pred             CcccccEEEEEE-CCEEEEEECCCCeEEEEECCCCcceEEEEcCCCCce-EEEEE
Confidence             22345677776 455666666777777666444323344555555554 77775

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.32  E-value=0.98  Score=37.59  Aligned_cols=100  Identities=12%  Similarity=0.061  Sum_probs=60.8

Q ss_pred             CeEEEEEcCCCCEEE-EeeCCC----eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----------
Q psy14961        180 DVNSVKFHPSGDAVA-TGSDDA----TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----------  243 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~-s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----------  243 (320)
                      .+...+++|++++++ +-+.+|    .+++.|+.+++.+......   .....+.|++|++.|+....+           
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~---~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~  202 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET  202 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc---ccccceEEcCCCCEEEEEEeccccCccccccc
Confidence            345678899999876 333333    6999999999865321111   112467899999977654322           


Q ss_pred             -----CeEEEEcCCCCeEE--EEeecCC--CceeEEEECcCCCeEEEe
Q psy14961        244 -----YTINVWDSLKCCRV--NHLMGHE--NRVSCLQVSPDGTAFSSG  282 (320)
Q Consensus       244 -----g~v~~wd~~~~~~~--~~~~~h~--~~i~~i~~s~~~~~l~s~  282 (320)
                           ..|..+.+.+....  ..+....  ..+..+..++|+++++..
T Consensus       203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred             ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEE
Confidence                 25666665543221  1122222  346778889999987643

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.17  E-value=2.1  Score=33.64  Aligned_cols=206  Identities=13%  Similarity=0.200  Sum_probs=107.4

Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeee
Q psy14961         24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQS  102 (320)
Q Consensus        24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~  102 (320)
                      +.-.+|..+.||--+ ...+.+||++.    ..+.+.....+. |.-=.|-.+. .|+--. +..|.=|+++. ..+.+.
T Consensus        67 sAIMhP~~~IiALra-g~~LQiFnlet----K~klks~~~~e~-VvfWkWis~~-~L~lVT-~taVYHW~~~g~s~P~k~  138 (327)
T d1utca2          67 SAIMNPASKVIALKA-GKTLQIFNIEM----KSKMKAHTMTDD-VTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKM  138 (327)
T ss_dssp             EEEECSSSSEEEEEE-TTEEEEEETTT----TEEEEEEECSSC-CCEEEESSSS-EEEEEC-SSEEEEEESSSSCCCEEE
T ss_pred             hhhcCCCCcEEEEec-CCeEEEEehhH----hhhhceEEcCCC-cEEEEecCCC-EEEEEc-CCceEEEcccCCCCchhh
Confidence            445789998887765 46899999853    222233333333 3333444333 343333 45799999854 345555


Q ss_pred             cccCcc--ceeEEEEeeCCCCCEEEEEe---C----CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961        103 FHGHTG--ELMDLDLAPSETGNTFVSGS---S----DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS  173 (320)
Q Consensus       103 ~~~~~~--~v~~~~~~~~~~~~~l~s~~---~----dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~  173 (320)
                      +..|..  ..--+.+..+++.+.++..+   .    .|.+.||....+ ..+.+++|.....               ...
T Consensus       139 fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~F~---------------~~~  202 (327)
T d1utca2         139 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA---------------QFK  202 (327)
T ss_dssp             EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEE---------------EEC
T ss_pred             hhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeeeeE---------------EEE
Confidence            554432  22225556677777776433   1    234555554432 2233333322110               001


Q ss_pred             ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe---e------EeE-EecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961        174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK---E------VAC-YKKDSILFGATSVDFSVSGRLLFAGYND  243 (320)
Q Consensus       174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~---~------~~~-~~~~~~~~~~~~~~~s~~~~~l~~g~~d  243 (320)
                      +.+...+..-++|...      +...+++++.++....   +      +.. ++.+...--+.++.+|+.-..+..-+.-
T Consensus       203 ~~g~~~~~~lf~fa~r------~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~  276 (327)
T d1utca2         203 MEGNAEESTLFCFAVR------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY  276 (327)
T ss_dssp             CTTCSSCEEEEEEEEE------ETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETT
T ss_pred             cCCCCCCceEEEEEEC------CCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecC
Confidence            1111112222222211      1234688888875421   1      111 1111111113567788888888889999


Q ss_pred             CeEEEEcCCCCeEEEE
Q psy14961        244 YTINVWDSLKCCRVNH  259 (320)
Q Consensus       244 g~v~~wd~~~~~~~~~  259 (320)
                      |-+.+||+.++..+..
T Consensus       277 G~i~lyDleTgt~i~~  292 (327)
T d1utca2         277 GYIHLYDLETGTCIYM  292 (327)
T ss_dssp             SEEEEEETTTCCEEEE
T ss_pred             cEEEEEEcccccEEEE
Confidence            9999999999877754

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.82  E-value=1.1  Score=37.56  Aligned_cols=105  Identities=9%  Similarity=0.080  Sum_probs=59.3

Q ss_pred             CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc------ceeeeEEEEEecC---CcEEEEEeC-------C
Q psy14961        180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS------ILFGATSVDFSVS---GRLLFAGYN-------D  243 (320)
Q Consensus       180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~s~~---~~~l~~g~~-------d  243 (320)
                      .-.+|+|.|+|+.|++--..|.|++++..+++.........      ...+...++|+|+   ..++...+.       +
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~~~  107 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCCcc
Confidence            45699999999988776557999999877765433222111      1134567899985   334444321       0


Q ss_pred             ----Ce--EEEEcCC--CC-----eEEEEee--cCCCceeEEEECcCCCeEEEecC
Q psy14961        244 ----YT--INVWDSL--KC-----CRVNHLM--GHENRVSCLQVSPDGTAFSSGSW  284 (320)
Q Consensus       244 ----g~--v~~wd~~--~~-----~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~  284 (320)
                          ..  +..+...  ..     ..+....  ........|+|.|||.++++.|.
T Consensus       108 ~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence                11  2222211  11     1111111  11123579999999998887764

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.30  E-value=2.4  Score=32.51  Aligned_cols=221  Identities=8%  Similarity=0.016  Sum_probs=116.6

Q ss_pred             eCccceEEEEEcCCCCEEEEe-cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEEC
Q psy14961         17 MPATWVMACAYAPSGSVVASG-GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDV   94 (320)
Q Consensus        17 ~~~~~V~~~~~~~~~~~l~s~-~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~   94 (320)
                      .+...+.+++|++..+.|.-+ ..++.|+..+++.....  .  .+.........+++..-++.|+.+ ...+.|.+.++
T Consensus        33 ~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~--~--v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~  108 (263)
T d1npea_          33 IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--T--IIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM  108 (263)
T ss_dssp             EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--E--EECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE--E--EEEeccccccEEEEeccCCeEEEeccCCCEEEEEec
Confidence            344557789999887777665 44577777776532211  1  111112345667775545566644 45679999998


Q ss_pred             CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-Ce--EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961         95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-KL--VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV  171 (320)
Q Consensus        95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g~--i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~  171 (320)
                      +.......+.........+++.|.  ..+++-.... +.  |..-++....                           ..
T Consensus       109 dg~~~~~l~~~~l~~p~~l~vdp~--~g~ly~t~~~~~~~~I~r~~~dG~~---------------------------~~  159 (263)
T d1npea_         109 DGTQRRVLFDTGLVNPRGIVTDPV--RGNLYWTDWNRDNPKIETSHMDGTN---------------------------RR  159 (263)
T ss_dssp             TSCSCEEEECSSCSSEEEEEEETT--TTEEEEEECCSSSCEEEEEETTSCC---------------------------CE
T ss_pred             CCceEEEEecccccCCcEEEEecc--cCcEEEeecCCCCcEEEEecCCCCC---------------------------ce
Confidence            755432222222234556666543  3344432211 11  2222222110                           00


Q ss_pred             eeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961        172 QSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD  250 (320)
Q Consensus       172 ~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd  250 (320)
                      ......-.....+++.+.++.|+-+ ...+.|...|++.............   +..+++. .+.+..+-...+.|...|
T Consensus       160 ~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~---P~~lav~-~~~lYwtd~~~~~I~~~~  235 (263)
T d1npea_         160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY---PFAVTSY-GKNLYYTDWKTNSVIAMD  235 (263)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS---EEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             eeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCC---cEEEEEE-CCEEEEEECCCCEEEEEE
Confidence            0011112245789999887777544 5678899999875443323322221   2345554 344444444678888889


Q ss_pred             CCCCeEEEEeecC-CCceeEEEECc
Q psy14961        251 SLKCCRVNHLMGH-ENRVSCLQVSP  274 (320)
Q Consensus       251 ~~~~~~~~~~~~h-~~~i~~i~~s~  274 (320)
                      ..++.....+..+ ......|++.+
T Consensus       236 ~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         236 LAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             TTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             CCCCccceEECCCCCCCcceEEEeC
Confidence            8877776655433 23455666554

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.88  E-value=11  Score=32.35  Aligned_cols=76  Identities=18%  Similarity=0.171  Sum_probs=48.6

Q ss_pred             CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-CceeEEEECcCCCe
Q psy14961        200 ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-NRVSCLQVSPDGTA  278 (320)
Q Consensus       200 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-~~i~~i~~s~~~~~  278 (320)
                      |.+.=+|+.+++.+-.++......+   -.++-.|.++++|+.||.++.+|..+++.+=++.-.. ..-.=+.|..||++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~---g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~q  542 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWA---GVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ  542 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCS---CCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCcc---ceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            5677777777776554443332221   1133467788889999999999999999885554221 11122677788874

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=81.29  E-value=11  Score=29.96  Aligned_cols=205  Identities=13%  Similarity=0.202  Sum_probs=104.0

Q ss_pred             cCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEE------EecCCCCEEEEEe-CC---CeEEEEECCC-
Q psy14961         28 APSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCC------IFPNSDQQILTGS-GD---CTCALWDVES-   96 (320)
Q Consensus        28 ~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~------~~~~~~~~l~s~~-~d---g~v~iwd~~~-   96 (320)
                      .|..++|++..+.+-+.+||+....     ...+.  .+.+..+      ........++.++ ++   .+|.+|.+.. 
T Consensus        37 ~p~~SlI~gTdK~~Gl~vYdL~G~~-----l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~  109 (353)
T d1h6la_          37 NPQNSKLITTNKKSGLAVYSLEGKM-----LHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK  109 (353)
T ss_dssp             CGGGCEEEEEETTSCCEEEETTCCE-----EEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETT
T ss_pred             CcCccEEEEEcCcCCEEEEcCCCcE-----EEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCc
Confidence            4567788888888889999985321     11111  1222222      2222222344444 32   3677887653 


Q ss_pred             cceeeeccc-------CccceeEEEEeeCC-CCC-EEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961         97 SQLLQSFHG-------HTGELMDLDLAPSE-TGN-TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT  167 (320)
Q Consensus        97 ~~~~~~~~~-------~~~~v~~~~~~~~~-~~~-~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~  167 (320)
                      ...+..+..       -...++.+|+..++ +|. +++....+|.+..|.+....              ++.+.      
T Consensus       110 ~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~--------------~g~v~------  169 (353)
T d1h6la_         110 NGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADK--------------NGYIS------  169 (353)
T ss_dssp             TTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECT--------------TSSEE------
T ss_pred             ccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCC--------------CCcee------
Confidence            222222221       12346778875443 344 45666778888888652210              00000      


Q ss_pred             CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-----eeEeEEecCcceeeeEEEEE--ecCCc-EEEE
Q psy14961        168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-----KEVACYKKDSILFGATSVDF--SVSGR-LLFA  239 (320)
Q Consensus       168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~--s~~~~-~l~~  239 (320)
                      .+.+.++. -...+..+.+.+....|+.+-++.-+..++....     ..+...........+..+++  .+++. +|++
T Consensus       170 ~~lvr~f~-~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~Gyliv  248 (353)
T d1h6la_         170 GKKVRAFK-MNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLA  248 (353)
T ss_dssp             EEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEE
T ss_pred             eEeeeccC-CCCccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEE
Confidence            01222222 2335778889988888988888876666665422     11111111111122333333  23333 5555


Q ss_pred             Ee-CCCeEEEEcCCCC-eEEEEe
Q psy14961        240 GY-NDYTINVWDSLKC-CRVNHL  260 (320)
Q Consensus       240 g~-~dg~v~~wd~~~~-~~~~~~  260 (320)
                      .+ .+++..+||.... ..+..|
T Consensus       249 SsQG~n~f~vydr~~~~~~~g~F  271 (353)
T d1h6la_         249 SSQGNSSYAIYERQGQNKYVADF  271 (353)
T ss_dssp             EEGGGTEEEEEESSTTCCEEEEE
T ss_pred             EcCCCCeEEEEecCCCccccceE
Confidence            54 5789999997653 455444