Psyllid ID: psy15142
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 744 | 2.2.26 [Sep-21-2011] | |||||||
| Q9JI12 | 582 | Vesicular glutamate trans | yes | N/A | 0.536 | 0.685 | 0.446 | 1e-107 | |
| Q8BLE7 | 582 | Vesicular glutamate trans | yes | N/A | 0.536 | 0.685 | 0.446 | 1e-107 | |
| Q5W8I8 | 584 | Vesicular glutamate trans | yes | N/A | 0.501 | 0.638 | 0.461 | 1e-107 | |
| A6QLI1 | 582 | Vesicular glutamate trans | yes | N/A | 0.538 | 0.689 | 0.447 | 1e-107 | |
| Q9P2U8 | 582 | Vesicular glutamate trans | yes | N/A | 0.534 | 0.683 | 0.449 | 1e-106 | |
| Q62634 | 560 | Vesicular glutamate trans | no | N/A | 0.490 | 0.651 | 0.459 | 1e-104 | |
| A4FV52 | 560 | Vesicular glutamate trans | no | N/A | 0.478 | 0.635 | 0.469 | 1e-104 | |
| Q3TXX4 | 560 | Vesicular glutamate trans | no | N/A | 0.478 | 0.635 | 0.469 | 1e-104 | |
| Q9P2U7 | 560 | Vesicular glutamate trans | no | N/A | 0.482 | 0.641 | 0.463 | 1e-104 | |
| Q5W8I7 | 587 | Vesicular glutamate trans | no | N/A | 0.479 | 0.608 | 0.461 | 1e-103 |
| >sp|Q9JI12|VGLU2_RAT Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/464 (44%), Positives = 274/464 (59%), Gaps = 65/464 (14%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A +++
Sbjct: 118 NWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAARVHY 177
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P++ IL
Sbjct: 178 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV 237
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV--AMP 499
++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S + AM
Sbjct: 238 QYTGWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAME 297
Query: 500 TLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559
TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + ++PH
Sbjct: 298 KF-KTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPH 356
Query: 560 LLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--M 617
L+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y+ + A +
Sbjct: 357 LVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFL 416
Query: 618 ALCLGIEG--------------------------------------------------RW 627
L +G G W
Sbjct: 417 VLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEW 476
Query: 628 TVVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKDEKYAI 685
VFLIAA VH+ G+ FYA+FASGE QPWA+P TSEE + ++L G + I
Sbjct: 477 QYVFLIAALVHYGGVIFYALFASGEKQPWADPEETSEEKCGFIHEDELDEETGDITQNYI 536
Query: 686 QNYGSTEDAPYNNYSN-------HIVAQPVQPASQDSYMNEQRN 722
NYG+T+ + N + VQ ++QD+Y + R+
Sbjct: 537 -NYGTTKSYGATSQENGGWPNGWEKKEEFVQESAQDAYSYKDRD 579
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate. Rattus norvegicus (taxid: 10116) |
| >sp|Q8BLE7|VGLU2_MOUSE Vesicular glutamate transporter 2 OS=Mus musculus GN=Slc17a6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/464 (44%), Positives = 273/464 (58%), Gaps = 65/464 (14%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A +++
Sbjct: 118 NWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAARVHY 177
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P++ IL
Sbjct: 178 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV 237
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV--AMP 499
++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S + AM
Sbjct: 238 QYTGWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAME 297
Query: 500 TLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559
TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + ++PH
Sbjct: 298 KF-KTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPH 356
Query: 560 LLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--M 617
L+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y+ + A +
Sbjct: 357 LVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFL 416
Query: 618 ALCLGIEG--------------------------------------------------RW 627
L +G G W
Sbjct: 417 VLAVGFSGFAISGFNVNHLDIAPRYASILMGISDGVGTLSGMVCPIIVGAMTKNKSREEW 476
Query: 628 TVVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKDEKYAI 685
VFLIAA VH+ G+ FYA+FASGE QPWA+P TSEE + ++L G + I
Sbjct: 477 QYVFLIAALVHYGGVIFYALFASGEKQPWADPEETSEEKCGFIHEDELDEETGDITQNYI 536
Query: 686 QNYGSTEDAPYNNYSN-------HIVAQPVQPASQDSYMNEQRN 722
NYG+T+ + N + VQ +QD+Y + R+
Sbjct: 537 -NYGTTKSYGATSQENGGWPNGWEKKEEFVQEGAQDAYTYKDRD 579
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Mus musculus (taxid: 10090) |
| >sp|Q5W8I8|VGL2A_DANRE Vesicular glutamate transporter 2.1 OS=Danio rerio GN=slc17a6b PE=2 SV=2 | Back alignment and function description |
|---|
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 262/433 (60%), Gaps = 60/433 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGG+ +SR ANR+FG AI TS L++F+P+A + +
Sbjct: 118 NWDPETVGLIHGSFFWGYIVTQIPGGYISSRLAANRVFGAAILLTSTLNMFIPSAARGHY 177
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P++ IL
Sbjct: 178 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV 237
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTL 501
++ W ++FY YGC G+ WY+ W+ +S+E P HPTI+ E YIE+S+G S ++ P
Sbjct: 238 QYTGWSSVFYVYGCFGIFWYMFWILVSYESPAEHPTITAEERCYIEESIGESAKLLGPAD 297
Query: 502 A-TTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 298 KFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSALPHL 357
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG LADHLR K ILSTT VRK+ NCGGFGMEA ++V Y+ S+ A +
Sbjct: 358 VMTIIVPIGGQLADHLRSKNILSTTTVRKIMNCGGFGMEATLLLIVGYSHSKGVAISFLV 417
Query: 619 LCLGIEG--------------------------------------------------RWT 628
L +G G W
Sbjct: 418 LAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTREEWQ 477
Query: 629 VVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKDEKYAIQ 686
VFLIA+ VH+ G+ FY IFASGE QPWA+P TS+E + ++L G Q
Sbjct: 478 YVFLIASLVHYGGVIFYGIFASGEKQPWADPELTSDEKCGFIDEDELAEETGD----ITQ 533
Query: 687 NYGSTEDAPYNNY 699
+YG+ AP +Y
Sbjct: 534 SYGAL-GAPAKSY 545
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. Required for glutamate release by retinotectal synapses and visual acuity. Danio rerio (taxid: 7955) |
| >sp|A6QLI1|VGLU2_BOVIN Vesicular glutamate transporter 2 OS=Bos taurus GN=SLC17A6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/467 (44%), Positives = 275/467 (58%), Gaps = 66/467 (14%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A +++
Sbjct: 118 NWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAARVHY 177
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P++ IL
Sbjct: 178 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV 237
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV--AMP 499
++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S + AM
Sbjct: 238 QYTGWSSVFYVYGSFGMIWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAME 297
Query: 500 TLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559
TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + ++PH
Sbjct: 298 KF-KTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPH 356
Query: 560 LLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--M 617
L+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y+ + A +
Sbjct: 357 LVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFL 416
Query: 618 ALCLGIEG--------------------------------------------------RW 627
L +G G W
Sbjct: 417 VLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEW 476
Query: 628 TVVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKDEKYAI 685
VFLIAA VH+ G+ FYAIFASGE QPWA+P TSEE + ++L G + I
Sbjct: 477 QYVFLIAALVHYGGVIFYAIFASGEKQPWADPEETSEEKCGFIHEDELDEETGDITQNYI 536
Query: 686 QNYGSTEDAPYNNYSNHIVAQPVQPASQDSYMNEQRNIVEESQNEFN 732
NYG+T+ +Y A P + + ++ + EE QN +N
Sbjct: 537 -NYGTTK-----SYGATTQANGGWP---NGWEKKEEFVQEEVQNSYN 574
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Bos taurus (taxid: 9913) |
| >sp|Q9P2U8|VGLU2_HUMAN Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/463 (44%), Positives = 271/463 (58%), Gaps = 65/463 (14%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A +++
Sbjct: 118 NWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAARVHY 177
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P++ IL
Sbjct: 178 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILV 237
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV--AMP 499
++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S + AM
Sbjct: 238 QYTGWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAME 297
Query: 500 TLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559
TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + ++PH
Sbjct: 298 KF-KTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPH 356
Query: 560 LLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--M 617
L+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y+ + A +
Sbjct: 357 LVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFL 416
Query: 618 ALCLGIEG--------------------------------------------------RW 627
L +G G W
Sbjct: 417 VLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEW 476
Query: 628 TVVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKDEKYAI 685
VFLIAA VH+ G+ FYAIFASGE QPWA+P TSEE + ++L G + I
Sbjct: 477 QYVFLIAALVHYGGVIFYAIFASGEKQPWADPEETSEEKCGFIHEDELDEETGDITQNYI 536
Query: 686 QNYGSTEDAPYNNYSN-------HIVAQPVQPASQDSYMNEQR 721
NYG+T+ +N + VQ QDS+ + R
Sbjct: 537 -NYGTTKSYGATTQANGGWPSGWEKKEEFVQGEVQDSHSYKDR 578
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Homo sapiens (taxid: 9606) |
| >sp|Q62634|VGLU1_RAT Vesicular glutamate transporter 1 OS=Rattus norvegicus GN=Slc17a7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 254/420 (60%), Gaps = 55/420 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRHIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG--------------------------------------------------RWT 628
L +G G W
Sbjct: 410 LAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQ 469
Query: 629 VVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKDEKYAIQ 686
VFLIA+ VH+ G+ FY +FASGE QPWAEP SEE + +QL +D + + ++
Sbjct: 470 YVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEKCGFVGHDQLAGSDESEMEDEVE 529
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Rattus norvegicus (taxid: 10116) |
| >sp|A4FV52|VGLU1_BOVIN Vesicular glutamate transporter 1 OS=Bos taurus GN=SLC17A7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/411 (46%), Positives = 250/411 (60%), Gaps = 55/411 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG--------------------------------------------------RWT 628
L +G G W
Sbjct: 410 LAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQ 469
Query: 629 VVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTD 677
VFLIA+ VH+ G+ FY +FASGE QPWAEP SEE + +QL +D
Sbjct: 470 YVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEKCGFVGHDQLAGSD 520
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Bos taurus (taxid: 9913) |
| >sp|Q3TXX4|VGLU1_MOUSE Vesicular glutamate transporter 1 OS=Mus musculus GN=Slc17a7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/411 (46%), Positives = 250/411 (60%), Gaps = 55/411 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRHIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG--------------------------------------------------RWT 628
L +G G W
Sbjct: 410 LAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQ 469
Query: 629 VVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTD 677
VFLIA+ VH+ G+ FY +FASGE QPWAEP SEE + +QL +D
Sbjct: 470 YVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEKCGFVGHDQLAGSD 520
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Mus musculus (taxid: 10090) |
| >sp|Q9P2U7|VGLU1_HUMAN Vesicular glutamate transporter 1 OS=Homo sapiens GN=SLC17A7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/414 (46%), Positives = 252/414 (60%), Gaps = 55/414 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
+W + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 SWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPLT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
+TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFSTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG--------------------------------------------------RWT 628
L +G G W
Sbjct: 410 LAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQ 469
Query: 629 VVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGKD 680
VFLIA+ VH+ G+ FY +FASGE QPWAEP SEE + +QL +D +
Sbjct: 470 YVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEKCGFVGHDQLAGSDDSE 523
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate. Homo sapiens (taxid: 9606) |
| >sp|Q5W8I7|VGL2B_DANRE Vesicular glutamate transporter 2.2 OS=Danio rerio GN=slc17a6a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/414 (46%), Positives = 254/414 (61%), Gaps = 57/414 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY +TQ+PGG+ +SR ANR+FG AI TS L++F+P+A +++
Sbjct: 119 NWDPETVGMIHGSFFWGYTVTQIPGGYISSRLAANRVFGAAILLTSTLNMFIPSAARVHY 178
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G V+ VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P++ IL
Sbjct: 179 GCVMFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVVAMPLAGILV 238
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV--AMP 499
++ W ++FY YG G++WY+ W+ +S+E P HPTI+ E YIE+S+G S ++ AM
Sbjct: 239 QYSGWSSVFYIYGSFGIVWYMFWILVSYESPADHPTITDEERTYIEESIGESAKLLGAME 298
Query: 500 TLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559
TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPH
Sbjct: 299 KY-KTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMVSALPH 357
Query: 560 LLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--M 617
L+MTI+VP GG LAD+LR K IL+TT VRK+ NCGGFGMEA +VV ++ S+ A +
Sbjct: 358 LVMTIIVPIGGQLADYLRSKNILTTTTVRKIMNCGGFGMEATLLLVVGFSHSKGVAISFL 417
Query: 618 ALCLGIEG--------------------------------------------------RW 627
L +G G W
Sbjct: 418 VLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKNKTREEW 477
Query: 628 TVVFLIAATVHFIGITFYAIFASGELQPWAEP--TSEEVASWNPMEQLQPTDGK 679
VFLIA+ VH+ G+ FY IFASGE QPWA+P TS+E + ++L G
Sbjct: 478 QNVFLIASLVHYGGVIFYGIFASGEKQPWADPEETSDEKCGFIDEDELAEETGD 531
|
Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. Danio rerio (taxid: 7955) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 744 | ||||||
| 158297203 | 556 | AGAP007992-PA [Anopheles gambiae str. PE | 0.560 | 0.75 | 0.549 | 1e-143 | |
| 242025277 | 634 | conserved hypothetical protein [Pediculu | 0.465 | 0.545 | 0.643 | 1e-139 | |
| 307180301 | 1844 | Vesicular glutamate transporter 1 [Campo | 0.534 | 0.215 | 0.512 | 1e-137 | |
| 345492288 | 654 | PREDICTED: vesicular glutamate transport | 0.551 | 0.626 | 0.505 | 1e-133 | |
| 322801982 | 668 | hypothetical protein SINV_00684 [Solenop | 0.477 | 0.531 | 0.596 | 1e-133 | |
| 332018158 | 640 | Vesicular glutamate transporter 2 [Acrom | 0.538 | 0.626 | 0.515 | 1e-133 | |
| 157124694 | 589 | sodium-dependent phosphate transporter [ | 0.561 | 0.709 | 0.533 | 1e-133 | |
| 383860588 | 639 | PREDICTED: vesicular glutamate transport | 0.555 | 0.646 | 0.512 | 1e-133 | |
| 380013590 | 1968 | PREDICTED: uncharacterized protein LOC10 | 0.459 | 0.173 | 0.595 | 1e-132 | |
| 328698968 | 617 | PREDICTED: vesicular glutamate transport | 0.541 | 0.653 | 0.518 | 1e-131 |
| >gi|158297203|ref|XP_317474.4| AGAP007992-PA [Anopheles gambiae str. PEST] gi|157015081|gb|EAA12373.4| AGAP007992-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/495 (54%), Positives = 325/495 (65%), Gaps = 78/495 (15%)
Query: 299 NFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRI 358
+FG + + F G VK+ NWTVA ESAVDSSFFWGYL+TQVPGGF AS +PANRI
Sbjct: 63 SFGMRCNMGMAKLQFENGSVKY-NWTVAMESAVDSSFFWGYLVTQVPGGFLASMFPANRI 121
Query: 359 FGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRL 418
FGTAIA ++FL+L VP A+ L+P VI+VR+ QGLVEGV YPA HGIWRFWAPPLERSRL
Sbjct: 122 FGTAIAISAFLNLLVPGAMMLHPTVVILVRVLQGLVEGVTYPACHGIWRFWAPPLERSRL 181
Query: 419 ATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTI 478
AT+AF G+YAG+V+G+P+S ILT SW A FYFYG MGL+WY WLWLSFEKP HPTI
Sbjct: 182 ATMAFSGSYAGVVIGMPMSGILTGSISWHAPFYFYGVMGLIWYCFWLWLSFEKPRQHPTI 241
Query: 479 SGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538
S +EL YIEKSLG SVQ+ MPT+ATTPWR F SMPVYAIIVANFCRSWNFYLLVL+Q++
Sbjct: 242 SVKELKYIEKSLGESVQLPMPTIATTPWRHFLTSMPVYAIIVANFCRSWNFYLLVLYQSA 301
Query: 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGM 598
YLK +F +I+ETG +G+LPHLLMTI+VP GGMLADH+RK G+LSTT VRKLFNCGGFG+
Sbjct: 302 YLKHSFDFRIEETGILGALPHLLMTIIVPFGGMLADHIRKSGLLSTTNVRKLFNCGGFGL 361
Query: 599 EAFFFVVVAYTKSEVTATMALCLG-----------------IEGRWTVVFL--------- 632
E FF+VVA+ S + A AL LG I R+ + +
Sbjct: 362 EGLFFLVVAHATSSMGAVTALTLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTI 421
Query: 633 --------------------------IAATVHFIGITFYAIFASGELQPWAEPTSEEVAS 666
IAATVH +GITFY IFASGELQPWAEPT EE +
Sbjct: 422 AGLICPIAIDHLTRGQPKSCWSTVFTIAATVHLVGITFYGIFASGELQPWAEPTVEEQRA 481
Query: 667 WNPMEQ----------------LQPTDGKDEKYAIQN------YGSTEDAPYNN---YSN 701
W+P+ P+ G + A N YG+ + NN Y
Sbjct: 482 WDPVGSGYEKETTFNEAGDGGAASPSGGMMDPSAQINATKTVSYGAVQQHVANNPFAYPT 541
Query: 702 HIVAQPVQPASQDSY 716
I + VQP ++D+Y
Sbjct: 542 AISEETVQPEARDTY 556
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242025277|ref|XP_002433052.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518568|gb|EEB20314.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/398 (64%), Positives = 299/398 (75%), Gaps = 52/398 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW+V ESAVDSSFFWGYLITQVPGGF AS+YPANRIFGTAIA +SFL+L VP AI ++P
Sbjct: 104 NWSVGVESAVDSSFFWGYLITQVPGGFLASKYPANRIFGTAIATSSFLNLLVPGAISIHP 163
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
I+VRICQGLVEGV YPA HGIWRFWAPPLERSRLAT+AF G+YAG+VLG+P+S +L
Sbjct: 164 TITILVRICQGLVEGVTYPACHGIWRFWAPPLERSRLATLAFSGSYAGVVLGMPLSGLLI 223
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTL 501
W+A FYFYG +GLLWYL WLWL+FEKPC HPTIS +EL YIE+SLGSS QVAMPT+
Sbjct: 224 GGIGWQAPFYFYGVVGLLWYLFWLWLTFEKPCKHPTISAKELYYIEQSLGSSTQVAMPTI 283
Query: 502 ATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLL 561
+TTPW+ F S PVYAII+ANFCRSWNFYLLVLFQA YL++ F+ QI+ETGF+G+LPHLL
Sbjct: 284 STTPWKNFFTSTPVYAIIIANFCRSWNFYLLVLFQAKYLQTCFNFQIEETGFVGALPHLL 343
Query: 562 MTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 621
MT++VP GG+LAD++RKKGILSTT VRKLFNCGGFGMEA FFVVVAY K+ + AT+AL
Sbjct: 344 MTMIVPMGGLLADNIRKKGILSTTAVRKLFNCGGFGMEALFFVVVAYAKTAMAATVALTF 403
Query: 622 G-------IEG---------------------------------------------RWTV 629
G I G W
Sbjct: 404 GVAFSGFAISGFNVNHLDIAPRYASILMGMSNGIGTIAGLICPIAIDNITRHHDCPSWKT 463
Query: 630 VFLIAATVHFIGITFYAIFASGELQPWAEPTSEEVASW 667
VF++AATVHF+G+TFYAIFASGELQPWAEPT E++ +W
Sbjct: 464 VFILAATVHFVGVTFYAIFASGELQPWAEPTPEQLKAW 501
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307180301|gb|EFN68334.1| Vesicular glutamate transporter 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/501 (51%), Positives = 322/501 (64%), Gaps = 103/501 (20%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NWT+ ESA+DSSFFWGYL+TQVPGGF AS YPANRIFGTAIA +SFL+L VP A+K++P
Sbjct: 1336 NWTIGVESALDSSFFWGYLVTQVPGGFLASLYPANRIFGTAIAISSFLNLLVPGALKVDP 1395
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
+IV++C+GLVEGV YPA HGIW++WAPPLERSRLAT+AFCG+YA +V+G+P+S L+
Sbjct: 1396 IVDMIVQVCKGLVEGVTYPACHGIWKYWAPPLERSRLATLAFCGSYAAMVIGMPLSGYLS 1455
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGS-SVQVAMPT 500
F W A FYFYG GL+WY WLWL+FEKP HP IS REL YIE SLG Q+ +PT
Sbjct: 1456 AWFGWTASFYFYGVCGLIWYGFWLWLAFEKPAKHPCISARELRYIEDSLGQGQTQLPVPT 1515
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
L+TTPWR+F SMPVYAIIVANFCRSWNFYLLVLFQ ++ +F + + ETG IGSLPHL
Sbjct: 1516 LSTTPWRKFLTSMPVYAIIVANFCRSWNFYLLVLFQPRFMHESFGMPLVETGVIGSLPHL 1575
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY---TKSEVTATM 617
LMT++VPCGG+LAD+LRK+GI++TT VRK+FNCGGFGMEA FF+VVA+ +++ AT+
Sbjct: 1576 LMTMIVPCGGLLADYLRKRGIMTTTNVRKVFNCGGFGMEALFFLVVAHATTSRNGTAATV 1635
Query: 618 AL-----CLG--IEG--------------------------------------------- 625
AL C G I G
Sbjct: 1636 ALAIGVACSGFAISGFNVNHLDIAPRYASILMGMSNGIGTIAGLLVPFFVDNITEKKDAH 1695
Query: 626 RWTVVFLIAATVHFIGITFYAIFASGELQPWAEPTSEEVASWNPMEQL------------ 673
W VF+IAA VH G+TFYAIF SGELQPWA+PT EE +WN M++
Sbjct: 1696 SWRNVFIIAACVHIFGVTFYAIFCSGELQPWADPTLEEQKAWNQMDEFGQTKPPVPPPPK 1755
Query: 674 --------QPT-DG--------------------KDEKYAIQNYGSTE---DAPY---NN 698
QP+ DG +D K + +YGSTE + P+ N
Sbjct: 1756 TMQSEFIKQPSRDGVGDDWNTYEQPAPENHMYMQQDNKAPVISYGSTETQSNNPFHSTNP 1815
Query: 699 YSNHIVAQPVQPASQDSYMNE 719
+++ I A VQP + D+Y ++
Sbjct: 1816 FASDISASLVQPPATDNYAHD 1836
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345492288|ref|XP_001603704.2| PREDICTED: vesicular glutamate transporter 2-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/497 (50%), Positives = 314/497 (63%), Gaps = 87/497 (17%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NWT+A +SAVDSSFFWGYL+TQVPGGF AS YPANRIFG AI +SFL+L VP AI +P
Sbjct: 129 NWTIATQSAVDSSFFWGYLVTQVPGGFLASLYPANRIFGLAIVVSSFLNLLVPGAISASP 188
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
++V++C+GLVEGV YPA HGIW++WAPPLERSRLAT+AFCG+YA +V+G+P+S +L+
Sbjct: 189 IVDMVVQVCKGLVEGVTYPACHGIWKYWAPPLERSRLATLAFCGSYAAVVIGMPLSGVLS 248
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLG-SSVQVAMPT 500
W A FYFYG G++WY WLWLSFEKP HP IS +EL YIE SLG + AMPT
Sbjct: 249 NWLGWTASFYFYGVFGMIWYCFWLWLSFEKPSKHPCISAKELRYIEDSLGQAQANQAMPT 308
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
+TTPWR+F SMPVYAIIVANFCRSWNFYLLVLFQA ++ F + + ETG +GSLPHL
Sbjct: 309 FSTTPWRKFLTSMPVYAIIVANFCRSWNFYLLVLFQARFMHEAFGMPVVETGILGSLPHL 368
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA---YTKSEVTATM 617
LMT++VPCGG+LADHLRK+GI+STT VRKLFNCGGFGMEA FF+VVA +++ ATM
Sbjct: 369 LMTLIVPCGGLLADHLRKRGIMSTTNVRKLFNCGGFGMEALFFLVVAKCTTSRNGAGATM 428
Query: 618 ALCLG-----------------IEGRWTVVFL---------------------------- 632
AL +G I R+ + +
Sbjct: 429 ALTVGVACSGFAISGFNVNHLDIAPRYASILMGMSNGIGTIAGLLVPIFVDNITRHKDPH 488
Query: 633 -------IAATVHFIGITFYAIFASGELQPWAEPTSEEVASWNPMEQL------------ 673
+AA VHF+G+TFYAIF SGELQPWA+P E+ SWNP+++L
Sbjct: 489 SWRNVFIMAACVHFVGVTFYAIFCSGELQPWADPVDEKT-SWNPLDELSQTKPPVPPPPQ 547
Query: 674 --------QPTDGKDEKYAIQNYGSTEDAPYNNYSNHIVAQPVQPASQDSYMNEQRNIVE 725
QP+ G+D Q+Y + APY + QP + Y +Q I
Sbjct: 548 VTQTQFIKQPSLGEDPA---QSYNYAQQAPYQEPPQY------QPPVNE-YQQQQEPIGA 597
Query: 726 ESQNEFNPFKQTSTNPF 742
+ + T+ NPF
Sbjct: 598 GQAPSYGATESTAGNPF 614
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322801982|gb|EFZ22519.1| hypothetical protein SINV_00684 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/411 (59%), Positives = 287/411 (69%), Gaps = 56/411 (13%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NWTV ESA+DSSFFWGYLITQVPGGF AS YPANRIFGTAIA +SFL+L VP A+K++P
Sbjct: 133 NWTVGVESALDSSFFWGYLITQVPGGFLASLYPANRIFGTAIAISSFLNLLVPGALKVDP 192
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
+ V++ +GLVEGV YPA HGIW+ WAPPLERSRLAT+AFCG+YA +V+G+P+S L+
Sbjct: 193 ILDMCVQVLKGLVEGVTYPACHGIWKHWAPPLERSRLATLAFCGSYAAMVIGMPLSGYLS 252
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGS-SVQVAMPT 500
F W A FYFYG GL+WY WLWL+FEKP HP IS REL YIE SLG VQ MPT
Sbjct: 253 SWFGWPASFYFYGICGLIWYCVWLWLAFEKPAKHPCISARELRYIEDSLGQGQVQAPMPT 312
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
LATTPWR+F SMPVYAIIVANFCRSWNFYLLVLFQ ++ F +++ ETG IGSLPHL
Sbjct: 313 LATTPWRKFLTSMPVYAIIVANFCRSWNFYLLVLFQPRFMHEAFKMELVETGLIGSLPHL 372
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY-TKSE--VTATM 617
LMT++VPCGG+LADHLRK+GI+STT VRK+FNCGGFGMEA FF+VVAY T SE AT+
Sbjct: 373 LMTMIVPCGGLLADHLRKRGIMSTTNVRKVFNCGGFGMEALFFLVVAYATTSENGTAATV 432
Query: 618 ALCLGI-----------------------------EGRWTVVFLI--------------- 633
AL G+ G T+ L+
Sbjct: 433 ALTFGVMCSGFAISGFNVNHLDIAPRYASILMGMSNGIGTIAGLLVPIFVDNITVKKDSH 492
Query: 634 --------AATVHFIGITFYAIFASGELQPWAEPTSEEVASWNPMEQLQPT 676
AA VHF G+TFYAIF SGELQPWA+PT+EE SWN M++ T
Sbjct: 493 SWRNVFITAACVHFFGVTFYAIFCSGELQPWADPTTEEQKSWNAMDEFGQT 543
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332018158|gb|EGI58764.1| Vesicular glutamate transporter 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/510 (51%), Positives = 320/510 (62%), Gaps = 109/510 (21%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NWTV ESA+DSSFFWGYL+TQVPGGF AS YPAN+IFGTAIA +SFL+L VP A+K++P
Sbjct: 131 NWTVGMESALDSSFFWGYLVTQVPGGFLASLYPANKIFGTAIAISSFLNLLVPGALKVDP 190
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
+ V++ +GLVEGV YPA HGIW++WAPPLERSRLAT+AFCG+YA +V+G+P+S L+
Sbjct: 191 IVDMGVQVLKGLVEGVTYPACHGIWKYWAPPLERSRLATLAFCGSYAAMVIGMPLSGYLS 250
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGS-SVQVAMPT 500
F W A FYFYG GL+WY WLWL+FEKP HP IS REL YIE SLG Q +PT
Sbjct: 251 SWFGWTASFYFYGMCGLIWYGFWLWLAFEKPSKHPCISARELRYIEDSLGQGQTQAPVPT 310
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
LATTPWR+F SMPVYAIIVANFCRSWNFYLLVLFQ ++ +F + + ETG IGSLPHL
Sbjct: 311 LATTPWRKFLTSMPVYAIIVANFCRSWNFYLLVLFQPRFMHESFGMPLVETGVIGSLPHL 370
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY-TKSE--VTATM 617
LMT++VPCGG+LAD+LRK+GI++TT VRK+FNCGGFGMEA FF+VVA+ T SE AT+
Sbjct: 371 LMTMIVPCGGLLADYLRKRGIMTTTNVRKVFNCGGFGMEALFFLVVAHATTSENGTAATV 430
Query: 618 ALCLG-------IEG--------------------------------------------- 625
AL +G I G
Sbjct: 431 ALAIGVACSGFAISGFNVNHLDIAPRYASILMGMSNGIGTIAGLLVPFFVDNITEKKDPH 490
Query: 626 RWTVVFLIAATVHFIGITFYAIFASGELQPWAEPTSEEVASWNPMEQL------------ 673
W VF+IAA VH G+TFYAIF SGELQPWA+PT EE SWNPM++
Sbjct: 491 SWRNVFIIAACVHIFGVTFYAIFCSGELQPWADPTLEEQKSWNPMDEFGQTKPPVPPPPK 550
Query: 674 --------QPT-DG---------------------KDEKYAIQNYGSTE---DAPY---N 697
QP+ DG +D K + NYGSTE P+ N
Sbjct: 551 TMQSEFIKQPSRDGSVTDDWNTYEQSPAENHLYARQDSKAPVINYGSTETNSSNPFHSTN 610
Query: 698 NYSNHIVAQPVQPASQDSYM-----NEQRN 722
+++ + A VQP + D Y N+Q N
Sbjct: 611 PFASDVNASFVQPPTTDDYAYDIVHNQQWN 640
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157124694|ref|XP_001654157.1| sodium-dependent phosphate transporter [Aedes aegypti] gi|108882786|gb|EAT47011.1| AAEL001867-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/499 (53%), Positives = 325/499 (65%), Gaps = 81/499 (16%)
Query: 299 NFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRI 358
+FG + + F VK+ NWTVA ESAVDSSFFWGYL+TQVPGGF AS +PANRI
Sbjct: 85 SFGMRCNMGMAKLQFENATVKY-NWTVAMESAVDSSFFWGYLVTQVPGGFLASMFPANRI 143
Query: 359 FGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRL 418
FGTAIAC+SFL+L VP A+ L+P +I+VR+ QGLVEGV YPA HGIWRFWAPPLERSRL
Sbjct: 144 FGTAIACSSFLNLLVPGAMALDPVVLIMVRVLQGLVEGVTYPACHGIWRFWAPPLERSRL 203
Query: 419 ATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTI 478
AT+AF G+YAG+V+G+P+S ILT SW A F+FYG G+ WY WLWLSFEKP HPTI
Sbjct: 204 ATMAFSGSYAGVVIGMPMSGILTGWISWHAPFFFYGLCGITWYCFWLWLSFEKPRQHPTI 263
Query: 479 SGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538
S +EL YIEKSLG SV + MP ++TTPWR A SMPVYAIIVANFCRSWNFYLLVL+Q++
Sbjct: 264 SLKELKYIEKSLGDSVSLPMPKISTTPWRAMATSMPVYAIIVANFCRSWNFYLLVLYQSA 323
Query: 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGM 598
YLK +F +I+ETG +G+LPHLLMTI+VP GGMLAD+LRK G+++TT VRKLFNCGGFG+
Sbjct: 324 YLKHSFDFKIEETGILGALPHLLMTIIVPFGGMLADYLRKSGLMTTTNVRKLFNCGGFGL 383
Query: 599 EAFFFVVVAYTKSEVTATMALCLG-----------------IEGRWTVVFL--------- 632
E FFF+VVA+T S + A AL LG I R+ + +
Sbjct: 384 EGFFFLVVAHTNSAMGAVTALTLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTI 443
Query: 633 --------------------------IAATVHFIGITFYAIFASGELQPWAEPTSEEVAS 666
IAATVH +GITFY IFASGELQPWAEPT EE +
Sbjct: 444 AGLICPIAIDHLTRGQPKSCWSTVFMIAATVHLVGITFYGIFASGELQPWAEPTIEEQKA 503
Query: 667 WNPMEQ-------------------------LQPTDGKDEKYAIQNYGSTEDAPYN--NY 699
W+PM + P+ + + +YG+ N Y
Sbjct: 504 WDPMATGYEKETTFNDANGAGGAAMAPGAPYMDPSAQINTTKTV-SYGAVSHVAGNPFAY 562
Query: 700 SNHIVAQPVQPASQDSYMN 718
N I +PVQP ++DSY++
Sbjct: 563 PNVINEEPVQPEAKDSYLH 581
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383860588|ref|XP_003705771.1| PREDICTED: vesicular glutamate transporter 3-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/492 (51%), Positives = 308/492 (62%), Gaps = 79/492 (16%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NWTV ESA+DSSFFWGYL+TQVPGGF AS YPAN+IFG AIA +SFL+L VP A+K++P
Sbjct: 131 NWTVGTESALDSSFFWGYLVTQVPGGFLASLYPANKIFGAAIAISSFLNLLVPGALKVDP 190
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
++V++ +GLVEGV YPA HGIW++WAPPLERSRLAT+AFCG+YA +V+G+P+S LT
Sbjct: 191 IVDMVVQVLKGLVEGVTYPACHGIWKYWAPPLERSRLATLAFCGSYAAMVIGMPLSGCLT 250
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGS-SVQVAMPT 500
F W A FYFYG GL+WY WLWL+FEKP HP IS REL YIE SLG Q+ +PT
Sbjct: 251 SIFGWTASFYFYGMSGLIWYCFWLWLAFEKPSKHPCISARELRYIEDSLGQGQAQIPIPT 310
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
ATTPWR+F SMPV+AIIVANFCRSWNFYLLVLFQA ++ F + + ETG IGSLPHL
Sbjct: 311 FATTPWRKFLTSMPVHAIIVANFCRSWNFYLLVLFQARFMHEAFGMPLVETGVIGSLPHL 370
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALC 620
LMT++VPCGG+LADH+RK+ ILSTT VRKLFNCGGFGMEA FF+VVA + T A+
Sbjct: 371 LMTMIVPCGGLLADHIRKREILSTTNVRKLFNCGGFGMEALFFLVVANATTHRNGTAAIV 430
Query: 621 --------------------LGIEGRWTVV------------------------------ 630
L I R+ +
Sbjct: 431 ALAFGVACSGFAISGFNVNHLDIAPRYASILMGMSNGVGTIAGLLVPFFVDNITEQKDAQ 490
Query: 631 -----FLIAATVHFIGITFYAIFASGELQPWAEPTSEEVASWNPMEQLQPTDG------- 678
F+IAA VH G+TFY IF SGELQPWA+P EE SWNPM++ T
Sbjct: 491 SWRNVFIIAACVHIFGVTFYGIFCSGELQPWADPVLEEQKSWNPMDEFGQTKPPVPPPPS 550
Query: 679 --KDEKYAIQNYGSTEDAPYNNYSNHIVAQPVQPASQDSYMNEQRNIV----EESQNEFN 732
+ E + G E +NNY QP + ++Y+ +++ V N N
Sbjct: 551 TMQSEFIKQPSMGGGEVDDWNNYE--------QPPADNTYVQQEKAPVISYGSTETNTNN 602
Query: 733 PFKQTSTNPFTQ 744
PF STNPF
Sbjct: 603 PFH--STNPFAN 612
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380013590|ref|XP_003690835.1| PREDICTED: uncharacterized protein LOC100863279 [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/398 (59%), Positives = 279/398 (70%), Gaps = 56/398 (14%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NWTV ESA+DSSFFWGYL+TQVPGGF AS YPAN+IFG AIA +SFL+L VP A+K++P
Sbjct: 1462 NWTVGTESALDSSFFWGYLLTQVPGGFVASLYPANKIFGAAIAISSFLNLLVPGALKVDP 1521
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
+IV++ +GLVEGV YPA HGIW++WAPPLERSRLAT+AFCG+YA +V+G+P+S LT
Sbjct: 1522 IVDMIVQVIKGLVEGVTYPACHGIWKYWAPPLERSRLATLAFCGSYAAMVIGMPLSGCLT 1581
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGS-SVQVAMPT 500
F W A FYFYG GL+WY WLWL+FEKP HP IS REL YIE SLG Q+AMPT
Sbjct: 1582 TIFGWTASFYFYGMCGLIWYCFWLWLAFEKPSKHPCISARELRYIEDSLGQGQTQMAMPT 1641
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
ATTPWR+F SMPV+AIIVANFCRSWNFYLLVLFQA ++ F + + ETG IGSLPHL
Sbjct: 1642 FATTPWRKFLTSMPVHAIIVANFCRSWNFYLLVLFQARFMHEAFGMALLETGVIGSLPHL 1701
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT---KSEVTATM 617
LMT++VP GG+LADH+RK+GILSTT VRKLFNCGGFGMEA FF+VVA+ K+ + A +
Sbjct: 1702 LMTMIVPLGGLLADHIRKRGILSTTNVRKLFNCGGFGMEALFFLVVAHATTKKNGMAAII 1761
Query: 618 AL-----CLG--IEG--------------------------------------------- 625
AL C G I G
Sbjct: 1762 ALAFGVACSGFAISGFNVNHLDIAPRYASILMGMSNGVGTIAGLLVPIFVDHITEKKDTQ 1821
Query: 626 RWTVVFLIAATVHFIGITFYAIFASGELQPWAEPTSEE 663
W VFLIAA VH G+TFYAIF SGELQPWA+P+ EE
Sbjct: 1822 SWKNVFLIAACVHIFGVTFYAIFCSGELQPWADPSMEE 1859
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328698968|ref|XP_001943932.2| PREDICTED: vesicular glutamate transporter 1-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/486 (51%), Positives = 309/486 (63%), Gaps = 83/486 (17%)
Query: 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK 378
+ INW++ A++ SFF GYLITQVPGGF AS YPANR+FG AIA +S L+L VP+A +
Sbjct: 149 RPINWSLGSFVAIEMSFFCGYLITQVPGGFLASMYPANRVFGIAIAMSSCLNLLVPSATE 208
Query: 379 LNPG-SVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPIS 437
+ VII+R+CQGLVEGV YPA HGIWR WAPPLERSRLATIA CG+YAG+V+G+P+S
Sbjct: 209 IEKSLYVIIIRMCQGLVEGVTYPACHGIWRHWAPPLERSRLATIALCGSYAGVVVGMPLS 268
Query: 438 AILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVA 497
L + FSWEA FY YG +GL+WY+ WLWL FEKP LHPTIS REL YIE SLG++ Q A
Sbjct: 269 GTLIDWFSWEAPFYVYGVLGLIWYVFWLWLCFEKPSLHPTISARELNYIESSLGAAKQSA 328
Query: 498 MPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557
PT+ TPW+EF SMPVYAIIVANFCRSWNFYLLVLFQASYL S F+ ++ TG+IG+L
Sbjct: 329 APTILNTPWKEFFTSMPVYAIIVANFCRSWNFYLLVLFQASYLHS-FNFEVSATGYIGAL 387
Query: 558 PHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATM 617
PHLLMTIVVP GG+LADH+RK GILSTT VRK+FNCGGFGMEA FF+V+A ++ + AT+
Sbjct: 388 PHLLMTIVVPLGGLLADHIRKNGILSTTSVRKIFNCGGFGMEATFFLVLANARTPLMATI 447
Query: 618 ALCLGI----------------------------------------------------EG 625
AL G+
Sbjct: 448 ALTCGVAFSGFAISGFNVNHLDIAPRYASILMGISNGIGTIAGLLCPVAINIIIRHKTRQ 507
Query: 626 RWTVVFLIAATVHFIGITFYAIFASGELQPWAEPTSEEVASWNPMEQLQPTDGKDEKYAI 685
W+ VF++AA +H+IG+ FYAIFASGELQPWAEP EE +Q D+K +
Sbjct: 508 SWSEVFILAAVIHYIGVVFYAIFASGELQPWAEPKVEE-------DQQMDEVNVDKKSKL 560
Query: 686 QNYGSTEDAPYNNYSNHIVAQPVQPASQDSYMNEQRNIVEE-----SQNEFNPF----KQ 736
+YGS E + + N + +N I E + N NPF
Sbjct: 561 TSYGSVEQSSGKGFVN-------------AGLNTNCTIGETEPAPPTDNPTNPFLAKPTA 607
Query: 737 TSTNPF 742
+TNPF
Sbjct: 608 ATTNPF 613
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 744 | ||||||
| FB|FBgn0031424 | 632 | VGlut "Vesicular glutamate tra | 0.407 | 0.479 | 0.651 | 1e-143 | |
| ZFIN|ZDB-GENE-030616-554 | 584 | slc17a6b "solute carrier famil | 0.413 | 0.527 | 0.541 | 3.5e-115 | |
| RGD|620101 | 560 | Slc17a7 "solute carrier family | 0.408 | 0.542 | 0.537 | 3.5e-115 | |
| MGI|MGI:1920211 | 560 | Slc17a7 "solute carrier family | 0.408 | 0.542 | 0.537 | 9.3e-115 | |
| UNIPROTKB|F1SFZ2 | 582 | SLC17A6 "Uncharacterized prote | 0.412 | 0.527 | 0.536 | 1.5e-114 | |
| UNIPROTKB|F6Y4M4 | 560 | SLC17A7 "Uncharacterized prote | 0.408 | 0.542 | 0.537 | 2.4e-114 | |
| UNIPROTKB|E2QZN7 | 558 | SLC17A7 "Uncharacterized prote | 0.408 | 0.544 | 0.537 | 2.4e-114 | |
| UNIPROTKB|F1PBW6 | 583 | SLC17A6 "Uncharacterized prote | 0.412 | 0.526 | 0.536 | 3.1e-114 | |
| UNIPROTKB|A6QLI1 | 582 | SLC17A6 "Vesicular glutamate t | 0.412 | 0.527 | 0.536 | 5.1e-114 | |
| UNIPROTKB|A4FV52 | 560 | SLC17A7 "Vesicular glutamate t | 0.408 | 0.542 | 0.537 | 6.4e-114 |
| FB|FBgn0031424 VGlut "Vesicular glutamate transporter" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1088 (388.1 bits), Expect = 1.0e-143, Sum P(3) = 1.0e-143
Identities = 198/304 (65%), Positives = 238/304 (78%)
Query: 321 INWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN 380
+NWTVA ES VDSSFFWGYL+TQ+PGGF AS++PAN+IFG +I ++ LHLFVP A+ L
Sbjct: 131 MNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLM 190
Query: 381 PGSVII-VRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAI 439
G V+I VR+ QGL EGV YPA HGIWRFWAPP+ERS LAT+AF G+YAG+V+GLP+S +
Sbjct: 191 HGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSGLATLAFSGSYAGVVVGLPLSGL 250
Query: 440 LTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP 499
L + ++A FY YG G++WY+ W+WL FE P HP IS EL YIEKSLG S MP
Sbjct: 251 LADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMP 310
Query: 500 TLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559
+L TTPWRE SMPVYAIIVANFCRSWNFYLLVLFQ+S+LK F +++E GF+GSLPH
Sbjct: 311 SLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPH 370
Query: 560 LLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMAL 619
L+MT +VP GGMLADHLRK GILSTT VRKLFNCGGFGME FF+ VA++ + A AL
Sbjct: 371 LIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFAL 430
Query: 620 CLGI 623
G+
Sbjct: 431 TCGV 434
|
|
| ZFIN|ZDB-GENE-030616-554 slc17a6b "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 938 (335.3 bits), Expect = 3.5e-115, Sum P(3) = 3.5e-115
Identities = 169/312 (54%), Positives = 220/312 (70%)
Query: 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA 376
K K NW + SFFWGY++TQ+PGG+ +SR ANR+FG AI TS L++F+P+A
Sbjct: 114 KAK-FNWDPETVGLIHGSFFWGYIVTQIPGGYISSRLAANRVFGAAILLTSTLNMFIPSA 172
Query: 377 IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI 436
+ + G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P+
Sbjct: 173 ARGHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPL 232
Query: 437 SAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV 496
+ IL ++ W ++FY YGC G+ WY+ W+ +S+E P HPTI+ E YIE+S+G S ++
Sbjct: 233 AGILVQYTGWSSVFYVYGCFGIFWYMFWILVSYESPAEHPTITAEERCYIEESIGESAKL 292
Query: 497 AMPT-LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555
P TPWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G +
Sbjct: 293 LGPADKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLS 352
Query: 556 SLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTA 615
+LPHL+MTI+VP GG LADHLR K ILSTT VRK+ NCGGFGMEA ++V Y+ S+ A
Sbjct: 353 ALPHLVMTIIVPIGGQLADHLRSKNILSTTTVRKIMNCGGFGMEATLLLIVGYSHSKGVA 412
Query: 616 T--MALCLGIEG 625
+ L +G G
Sbjct: 413 ISFLVLAVGFSG 424
|
|
| RGD|620101 Slc17a7 "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 3.5e-115, Sum P(3) = 3.5e-115
Identities = 165/307 (53%), Positives = 215/307 (70%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRHIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG 625
L +G G
Sbjct: 410 LAVGFSG 416
|
|
| MGI|MGI:1920211 Slc17a7 "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 9.3e-115, Sum P(3) = 9.3e-115
Identities = 165/307 (53%), Positives = 215/307 (70%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRHIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG 625
L +G G
Sbjct: 410 LAVGFSG 416
|
|
| UNIPROTKB|F1SFZ2 SLC17A6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 1.5e-114, Sum P(3) = 1.5e-114
Identities = 168/313 (53%), Positives = 218/313 (69%)
Query: 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA 376
K K NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A
Sbjct: 114 KAK-FNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSA 172
Query: 377 IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI 436
+++ G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P+
Sbjct: 173 ARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPL 232
Query: 437 SAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV 496
+ IL ++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S +
Sbjct: 233 AGILVQYTGWSSVFYVYGSFGMIWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANL 292
Query: 497 --AMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554
AM T PWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G +
Sbjct: 293 LGAMEKFKT-PWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGML 351
Query: 555 GSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY--TKSE 612
++PHL+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y T+
Sbjct: 352 SAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGV 411
Query: 613 VTATMALCLGIEG 625
+ + L +G G
Sbjct: 412 AISFLVLAVGFSG 424
|
|
| UNIPROTKB|F6Y4M4 SLC17A7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 165/307 (53%), Positives = 215/307 (70%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG 625
L +G G
Sbjct: 410 LAVGFSG 416
|
|
| UNIPROTKB|E2QZN7 SLC17A7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 165/307 (53%), Positives = 215/307 (70%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG 625
L +G G
Sbjct: 410 LAVGFSG 416
|
|
| UNIPROTKB|F1PBW6 SLC17A6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 168/313 (53%), Positives = 218/313 (69%)
Query: 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA 376
K K NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A
Sbjct: 115 KAK-FNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSA 173
Query: 377 IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI 436
+++ G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P+
Sbjct: 174 ARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPL 233
Query: 437 SAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV 496
+ IL ++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S +
Sbjct: 234 AGILVQYTGWSSVFYVYGSFGMIWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANL 293
Query: 497 --AMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554
AM T PWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G +
Sbjct: 294 LGAMEKFKT-PWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGML 352
Query: 555 GSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY--TKSE 612
++PHL+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y T+
Sbjct: 353 SAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGV 412
Query: 613 VTATMALCLGIEG 625
+ + L +G G
Sbjct: 413 AISFLVLAVGFSG 425
|
|
| UNIPROTKB|A6QLI1 SLC17A6 "Vesicular glutamate transporter 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 5.1e-114, Sum P(3) = 5.1e-114
Identities = 168/313 (53%), Positives = 218/313 (69%)
Query: 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA 376
K K NW + SFFWGY+ITQ+PGG+ ASR ANR+FG AI TS L++ +P+A
Sbjct: 114 KAK-FNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSA 172
Query: 377 IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI 436
+++ G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT +FCG+YAG V+ +P+
Sbjct: 173 ARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPL 232
Query: 437 SAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV 496
+ IL ++ W ++FY YG G++WY+ WL +S+E P HPTI+ E YIE+S+G S +
Sbjct: 233 AGILVQYTGWSSVFYVYGSFGMIWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANL 292
Query: 497 --AMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554
AM T PWR+F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G +
Sbjct: 293 LGAMEKFKT-PWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGML 351
Query: 555 GSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY--TKSE 612
++PHL+MTI+VP GG +AD LR K ILSTT VRK+ NCGGFGMEA +VV Y T+
Sbjct: 352 SAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGV 411
Query: 613 VTATMALCLGIEG 625
+ + L +G G
Sbjct: 412 AISFLVLAVGFSG 424
|
|
| UNIPROTKB|A4FV52 SLC17A7 "Vesicular glutamate transporter 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 6.4e-114, Sum P(3) = 6.4e-114
Identities = 165/307 (53%), Positives = 215/307 (70%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
NW + SFFWGY++TQ+PGGF ++ ANR+FG AI TS L++ +P+A +++
Sbjct: 110 NWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHY 169
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
G VI VRI QGLVEGV YPA HGIW WAPPLERSRLAT AFCG+YAG V+ +P++ +L
Sbjct: 170 GCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLV 229
Query: 442 EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMP-T 500
++ W ++FY YG G+ WYL WL +S+E P LHP+IS E YIE ++G S ++ P T
Sbjct: 230 QYSGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPVT 289
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
TPWR F SMPVYAIIVANFCRSW FYLL++ Q +Y + F +I + G + +LPHL
Sbjct: 290 KFNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHL 349
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--MA 618
+MTI+VP GG +AD LR + I+STT VRKL NCGGFGMEA +VV Y+ S+ A +
Sbjct: 350 VMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLV 409
Query: 619 LCLGIEG 625
L +G G
Sbjct: 410 LAVGFSG 416
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q05B21 | VGLU1_XENTR | No assigned EC number | 0.4062 | 0.6034 | 0.7795 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 744 | |||
| TIGR00894 | 465 | TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph | 1e-52 | |
| pfam01221 | 86 | pfam01221, Dynein_light, Dynein light chain type 1 | 5e-30 | |
| TIGR00893 | 399 | TIGR00893, 2A0114, D-galactonate transporter | 2e-27 | |
| PTZ00059 | 90 | PTZ00059, PTZ00059, dynein light chain; Provisiona | 3e-27 | |
| pfam07690 | 346 | pfam07690, MFS_1, Major Facilitator Superfamily | 4e-27 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 7e-27 | |
| TIGR00894 | 465 | TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph | 6e-14 | |
| PLN03058 | 128 | PLN03058, PLN03058, dynein light chain type 1 fami | 1e-08 | |
| COG0477 | 338 | COG0477, ProP, Permeases of the major facilitator | 1e-08 | |
| TIGR00881 | 379 | TIGR00881, 2A0104, phosphoglycerate transporter fa | 6e-08 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 2e-06 | |
| TIGR00880 | 141 | TIGR00880, 2_A_01_02, Multidrug resistance protein | 3e-06 | |
| COG2814 | 394 | COG2814, AraJ, Arabinose efflux permease [Carbohyd | 1e-04 | |
| TIGR00883 | 394 | TIGR00883, 2A0106, metabolite-proton symporter | 1e-04 | |
| TIGR00895 | 398 | TIGR00895, 2A0115, benzoate transport | 3e-04 | |
| TIGR00711 | 485 | TIGR00711, efflux_EmrB, drug resistance transporte | 8e-04 | |
| TIGR02332 | 412 | TIGR02332, HpaX, 4-hydroxyphenylacetate permease | 0.001 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 0.003 |
| >gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 1e-52
Identities = 111/396 (28%), Positives = 164/396 (41%), Gaps = 57/396 (14%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP 381
W+ A + + SS F+G +I Q+P G+ A +Y G + +S + + +P A
Sbjct: 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGI 131
Query: 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT 441
V+ R+ QGL +G PA H I WAPP ERSRL ++ G G + LPIS L
Sbjct: 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC 191
Query: 442 EHFS-WEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPT 500
E + W +FY +G +G W L W + P +HP IS E YI SL T
Sbjct: 192 ESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSL---QGQKGST 248
Query: 501 LATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHL 560
+ P + S+PV+AI A F W + +L + +++ + +E G + SLP+L
Sbjct: 249 RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308
Query: 561 LMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSE-------- 612
+ G LAD L+ LS T RK+FN G F + Y +
Sbjct: 309 FAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIIL 368
Query: 613 -------------------------------VTATMALCLGI--------------EGRW 627
+T G+ + W
Sbjct: 369 TLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVW 428
Query: 628 TVVFLIAATVHFIGITFYAIFASGELQPWAEPTSEE 663
+VFLI A V+ + + FY IF S E Q WA+ +
Sbjct: 429 LIVFLIMAFVNILCVIFYLIFGSAERQDWAKEEKDT 464
|
[Transport and binding proteins, Anions]. Length = 465 |
| >gnl|CDD|189895 pfam01221, Dynein_light, Dynein light chain type 1 | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-30
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 251 MDADMQQKAIDATKEGLEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFET-H 309
M +MQ+ AI+ E LEKFN+E+++A +IK+ F+ YGP W C+VG+NFGSYV+ ET H
Sbjct: 10 MPEEMQEDAIECAAEALEKFNVEKDIAAHIKKEFDKKYGPTWHCIVGKNFGSYVTHETKH 69
Query: 310 YIYFYLGKV 318
+IYFY+G++
Sbjct: 70 FIYFYIGQL 78
|
Length = 86 |
| >gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-27
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 9/301 (2%)
Query: 326 AQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVI 385
AQ V S+F WGY++ Q PGG+ R+ A + I A S+
Sbjct: 29 AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGL--QAFAGAYVSLY 86
Query: 386 IVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS 445
I+R+ G E +P + I W P ER+ +I G ++G P+ + HFS
Sbjct: 87 ILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS 146
Query: 446 WEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIE-KSLGSSVQVAMPTLATT 504
W+ F G +G++W + WL + P E YI L + Q P+
Sbjct: 147 WQWAFIIEGVLGIIWGVLWLKFIPDPP-QKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKK 205
Query: 505 P--WREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLM 562
V+ + + F + + + +YL L I E GF+ SLP ++
Sbjct: 206 YQIKELLKDRR-VWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVG 264
Query: 563 TIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 622
I + GG L+D L ++G + + + + + Y A + LG
Sbjct: 265 FIGMILGGRLSDLLLRRG--KSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALG 322
Query: 623 I 623
Sbjct: 323 F 323
|
[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399 |
| >gnl|CDD|185421 PTZ00059, PTZ00059, dynein light chain; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-27
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 251 MDADMQQKAIDATKEGLEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFET-H 309
M DMQQ AID + LEKFNIE+++A YIK+ F+ Y P W C+VGRNFGSYV+ ET H
Sbjct: 14 MSEDMQQDAIDCANQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKH 73
Query: 310 YIYFYLGKV 318
+IYFYLG+V
Sbjct: 74 FIYFYLGQV 82
|
Length = 90 |
| >gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 4e-27
Identities = 63/323 (19%), Positives = 112/323 (34%), Gaps = 25/323 (7%)
Query: 299 NFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRI 358
F + + L + + + + + ++F GY + Q G + R+ R+
Sbjct: 5 AFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRV 64
Query: 359 FGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRL 418
+ + L + A + ++++R+ QGL G +PA + W PP ER R
Sbjct: 65 LLIGLLLFALGLLLLLFAS--SLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRA 122
Query: 419 ATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTI 478
+ G G LG + +L F W A F + LL + L P
Sbjct: 123 LGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALLLPRPPPESKRP 182
Query: 479 SGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538
E P + PV +++A + F+ L+ +
Sbjct: 183 KPAEEA---------------PAPLVPAWKLLLRDPVLWLLLALLLFGFAFFALLTYLPL 227
Query: 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGM 598
Y + L G + L LL I G L+D L ++ R L +
Sbjct: 228 YQE-VLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRR-------RRLLLALLLLIL 279
Query: 599 EAFFFVVVAYTKSEVTATMALCL 621
A +++ T+S + +AL L
Sbjct: 280 AALGLALLSLTESSLWLLVALLL 302
|
Length = 346 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 7e-27
Identities = 69/373 (18%), Positives = 117/373 (31%), Gaps = 87/373 (23%)
Query: 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI 377
+ + + +Q + S+F GY + + G+ + R+ R+ + + L + A
Sbjct: 26 AEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA- 84
Query: 378 KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPIS 437
+ +++ R GL G YPA + W PP ER R + G G +LG +
Sbjct: 85 -SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLG 143
Query: 438 AILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVA 497
+L E W +F +GLL L L+L
Sbjct: 144 GLLAESLGWRWLFLILAILGLLLALLLLFLL----------------------------- 174
Query: 498 MPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557
+ + +A F S+ +Y L+ + YL+ L E G + SL
Sbjct: 175 ---------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSL 219
Query: 558 PHLLMTIVVPCGGMLADHLRKK-------------GILSTTMVRKLFN------CGGFGM 598
L + GG+L+D L ++ G+L + L GFG+
Sbjct: 220 FGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGL 279
Query: 599 EAFF-----FVVVAYTKSEVTATMALCLGI-----------------EGRWTVVFLIAAT 636
F L G + VFLI A
Sbjct: 280 GFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAA 339
Query: 637 VHFIGITFYAIFA 649
+ + +
Sbjct: 340 LALLAALLLLLLP 352
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 6e-14
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS 189
G + SLP+L + G LAD L+ LS T RK+FN G F + Y +
Sbjct: 300 GLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA 359
Query: 190 E-VTATMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFIS 241
+ L L A S ++G +N LD+APR+ + G++ G I I+
Sbjct: 360 AFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIA 412
|
[Transport and binding proteins, Anions]. Length = 465 |
| >gnl|CDD|166697 PLN03058, PLN03058, dynein light chain type 1 family protein; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 1e-08
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 249 STMDADMQQKAIDATKEGLE----KFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYV 304
S M +Q +A ++ L+ K + +R +A +K+ F++AYGP W C+VG +FGSYV
Sbjct: 41 SDMPLVLQNRAFSCARDILDAMPGKLDSKR-LALALKKEFDSAYGPAWHCIVGTSFGSYV 99
Query: 305 SFET-HYIYFYLGKV 318
+ T ++YF + KV
Sbjct: 100 THSTGGFLYFSIDKV 114
|
Length = 128 |
| >gnl|CDD|223553 COG0477, ProP, Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 57.0 bits (136), Expect = 1e-08
Identities = 50/328 (15%), Positives = 96/328 (29%), Gaps = 11/328 (3%)
Query: 292 WQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFAS 351
+ L ++ + S+FF GY I + G
Sbjct: 5 LALALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGD 64
Query: 352 RYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAP 411
RY ++ + L + A + ++I+R+ QGL G P + W P
Sbjct: 65 RYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFP 124
Query: 412 PLER--SRLATIAFCGTYAGIVLGLPISAILTEHF--SWEAMFYFYGCMGLLWYLCWL-- 465
+ + G+ LG ++ +L W A F +GLL + L
Sbjct: 125 EATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLLLILVLLL 184
Query: 466 -----WLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIV 520
I +LL + L V + F + + +
Sbjct: 185 DLLLAAPRLPLAVGLALIELGKLLLLLLILLLGGLVLLLLGLYLSAAGFGLRALLLGLGL 244
Query: 521 ANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580
A +L++ L + L G L +L+ + G ++ L
Sbjct: 245 ALLALFVGALILLVLLPILLGAAGGLSALVGAAGGLLALILLGLAGLLGTLVGGSLLVDR 304
Query: 581 ILSTTMVRKLFNCGGFGMEAFFFVVVAY 608
+ + +R + G + V++
Sbjct: 305 LGRSLGLRAILLAGALLLAILLLVLLLA 332
|
Length = 338 |
| >gnl|CDD|233167 TIGR00881, 2A0104, phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 6e-08
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 4/156 (2%)
Query: 333 SSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQG 392
SSF Y I++ G + R + + ++LF + L + + G
Sbjct: 37 SSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL--WVMAALWALNG 94
Query: 393 LVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG-TYAGIVLGLPISAILTEHFSWEAMFY 451
+ +G+ +P W ER + C G +L + + E +SW +F
Sbjct: 95 IFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFI 154
Query: 452 FYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIE 487
G + ++ L L + P + E + E
Sbjct: 155 VPGIIAIIVSLICFLLLRDSP-QSCGLPPAEEMPNE 189
|
[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 379 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 2e-06
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 12/172 (6%)
Query: 300 FGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFW-GYLITQVPGGFFASRYPANR- 357
Y T Y+ YL +V ++ A E+ + S F G ++ + GG + R R
Sbjct: 188 SFGYYGLLT-YLPLYLQEVLGLS---AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL 243
Query: 358 --IFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLER 415
+ G +A L A+ + +++ + G G +PA+ + APP R
Sbjct: 244 LLLIGLLLAALGLL----LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEAR 299
Query: 416 SRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467
+ + G LG ++ +L + + +F + LL L L L
Sbjct: 300 GTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLL 351
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Query: 333 SSFFWGYLITQVPGGFFASRYPANR----IFGTAIACTSFLHLFVPTAIKLNPGSVIIVR 388
+ + G LI G R+ R + G I F+ A+ N +II R
Sbjct: 5 AGYALGQLIYSPLSGLLTDRF--GRKPVLLVGLFI----FVLSTAMFALSSNITVLIIAR 58
Query: 389 ICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEA 448
QG A + PP ER + G G +LG P+ +L + W A
Sbjct: 59 FLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRA 118
Query: 449 MFYFYGCMGLL 459
F F + L
Sbjct: 119 PFLFLAILALA 129
|
Length = 141 |
| >gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
Query: 333 SSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQG 392
+++ G + R R+ +A +L A+ + +++ R G
Sbjct: 55 TAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS--ALAPSFAVLLLARALAG 112
Query: 393 LVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYF 452
L GV + + PP +R R + F G VLG+P+ L + F W A F
Sbjct: 113 LAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLA 172
Query: 453 YGCMGLLWYLCWLWLSFEKPCLHPTISG 480
+ LL L LW + ++ G
Sbjct: 173 IAVLALL-ALLLLWKLLPPSEISGSLPG 199
|
Length = 394 |
| >gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 53/285 (18%), Positives = 90/285 (31%), Gaps = 54/285 (18%)
Query: 384 VIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH 443
+++ R+ QG G + +APP +R + G G++L +L+
Sbjct: 99 LLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL 158
Query: 444 FSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGREL----LYIEKSLGSSV----Q 495
+A+ L W W P + L LY+ ++L +
Sbjct: 159 LGDDAL------------LEWGWRI-------PFLVSAVLVLIGLYLRRNLEETPVFEKA 199
Query: 496 VAMPTLATTPWREF--AHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF 553
P E H P + + FYL+ + +YL T L
Sbjct: 200 QEKHKKKRGPIAETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALL 259
Query: 554 IGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV 613
+ L +L I +P G L+D + ++ +L F + A V
Sbjct: 260 VLMLSLILFFITIPLSGALSDRIGRRPVLI-----------IFTVLAALLAVPLL----- 303
Query: 614 TATMALCLGIEGRWTVVFLIAATVH-FIGITFYAIFAS--GELQP 655
MAL ++ +F IG + S EL P
Sbjct: 304 ---MAL---LDSGSFTLFFFLVLGMALIGGMYTGPMGSFLPELFP 342
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc [Transport and binding proteins, Unknown substrate]. Length = 394 |
| >gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-04
Identities = 72/339 (21%), Positives = 109/339 (32%), Gaps = 69/339 (20%)
Query: 324 TVAQESAVDSS-----FFWGYLITQVPGGFF----ASRYPANRIFGTAIACTSFLHLFVP 374
++ E +D F G LI G F A R R+ +I S L
Sbjct: 42 AISAEWGLDPVQLGFLFSAG-LIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLL-- 98
Query: 375 TAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGL 434
A+ N ++I+R GL G P ++ + +AP R + FCG G +G
Sbjct: 99 CALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGG 158
Query: 435 PISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSV 494
++ L F W ++FY G LL L L + F L +I ++ +V
Sbjct: 159 FLAGWLIPVFGWRSLFYVGGIAPLL--LLLLLMRF----LPESID-----FLVSKRPETV 207
Query: 495 QVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQ------- 547
+ + +A E ++P RS LFQ + T L
Sbjct: 208 RRIVNAIAPQMQAEAQSALPE-QKATQGTKRS---VFKALFQGKTARITVLLWLLYFMLL 263
Query: 548 -------------IQETGFIGSLPHLLMTIVVPCGGM--------LADHLRKKGILSTTM 586
+ E GF SL + GG+ LAD L +
Sbjct: 264 VGVYFLTNWLPKLMVELGFSLSLAATGGALFN-FGGVIGSIIFGWLADRLGPRVTA---- 318
Query: 587 VRKLFNCGGFGMEAFFFVVVAYTKSEVT--ATMALCLGI 623
+ A F V+V T T + G
Sbjct: 319 -------LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGF 350
|
[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398 |
| >gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 8e-04
Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 347 GFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIW 406
G+ A R+ R+F + + L A L +II R+ QG G P
Sbjct: 58 GWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLE--LMIIFRVIQGFGGGPLIPLSFSTL 115
Query: 407 RFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYL-CWL 465
PP +R R I LG + + E++ W +F +G++ + +
Sbjct: 116 LNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFF 175
Query: 466 WLSFEKPCLHPTISGRELLYIEKSLGS 492
L +KP LL + LGS
Sbjct: 176 ILPRDKPAASENFDFLGLLLLSVGLGS 202
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]. Length = 485 |
| >gnl|CDD|131385 TIGR02332, HpaX, 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 50/216 (23%), Positives = 79/216 (36%), Gaps = 40/216 (18%)
Query: 335 FFWGYLITQVPGGFFASRYPANR-------IFGTAIACTSFLHLFVPTAIKLNPGSVIIV 387
F+ Y+I +P + A R ++G A T F P S+ ++
Sbjct: 52 FYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF---------ATGPESLYLL 102
Query: 388 RICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAI------LT 441
RI G+ E P + FW P R+R + + LGL +S L
Sbjct: 103 RILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162
Query: 442 EHFSWEAMFYFYGCMG-LLWYLCWLWLS-----------FEKPCLHPTISGRELLYIEKS 489
W+ +F G +L + W WL +K L I + L +E+
Sbjct: 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMID-NDQLTLEQP 221
Query: 490 LGSSVQVAMPTLATTPWRE-FAHSMPVYAIIVANFC 524
G+ AMP + RE F ++ +Y + A FC
Sbjct: 222 EGAFAHAAMPQRSM--LREIFTPAIMLYTL--AYFC 253
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PMID:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. Length = 412 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 10/138 (7%)
Query: 100 MATLTCVGFIISFGMKCNLGFAKLQFEGRTGFIGSLPHLLMTIVVPCGGMLADHLRKKGI 159
L+ + + + L G + SL L + GG+L+D L +
Sbjct: 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGR--- 240
Query: 160 LSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL-GVAFSGFAISGYNVNHLDI 218
R+L G + A +++A S +AL L G + +
Sbjct: 241 ------RRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELA 294
Query: 219 APRYASILMGMSNGIGTI 236
P G+ N G++
Sbjct: 295 PPEARGTASGLFNTFGSL 312
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 744 | |||
| KOG2532|consensus | 466 | 100.0 | ||
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 99.97 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 99.97 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 99.96 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 99.95 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 99.95 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.95 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 99.95 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 99.95 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.95 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.94 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 99.94 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.94 | |
| KOG2533|consensus | 495 | 99.93 | ||
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.93 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.93 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 99.93 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 99.93 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.93 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 99.93 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.93 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 99.93 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 99.93 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 99.93 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 99.92 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.92 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 99.92 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.92 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.92 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.92 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.92 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 99.91 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 99.91 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 99.91 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.91 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 99.91 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.91 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 99.91 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.91 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 99.91 | |
| PRK10504 | 471 | putative transporter; Provisional | 99.91 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 99.91 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 99.91 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 99.9 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 99.9 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 99.9 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 99.9 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 99.9 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 99.9 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.9 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 99.9 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 99.89 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.89 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 99.89 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.89 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 99.89 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 99.89 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.89 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.89 | |
| KOG1330|consensus | 493 | 99.89 | ||
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.89 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 99.89 | |
| KOG0569|consensus | 485 | 99.89 | ||
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 99.89 | |
| PRK11043 | 401 | putative transporter; Provisional | 99.89 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.88 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 99.88 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 99.88 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.88 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 99.88 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.88 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.88 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 99.88 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 99.88 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.88 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 99.88 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 99.88 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 99.88 | |
| KOG0569|consensus | 485 | 99.88 | ||
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.88 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.88 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.88 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 99.88 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.88 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 99.87 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.87 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.87 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.87 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.87 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.87 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.86 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.86 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 99.86 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 99.86 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 99.86 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 99.86 | |
| KOG2504|consensus | 509 | 99.86 | ||
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.86 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 99.85 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.85 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.85 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 99.85 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.85 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 99.85 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.85 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.85 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.85 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 99.85 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.84 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 99.84 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.84 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.84 | |
| KOG0254|consensus | 513 | 99.84 | ||
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 99.84 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.84 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.84 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.83 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.83 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.83 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.83 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.83 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.83 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.83 | |
| PRK10504 | 471 | putative transporter; Provisional | 99.83 | |
| KOG0254|consensus | 513 | 99.82 | ||
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 99.82 | |
| KOG3764|consensus | 464 | 99.82 | ||
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.82 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 99.82 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 99.82 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.82 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.82 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.81 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.81 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 99.81 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 99.81 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 99.81 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 99.81 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 99.8 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.8 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.8 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.8 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 99.79 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 99.79 | |
| KOG0252|consensus | 538 | 99.79 | ||
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 99.79 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 99.78 | |
| KOG0255|consensus | 521 | 99.78 | ||
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.78 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 99.78 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.78 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 99.78 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.78 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 99.78 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.77 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 99.77 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.77 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 99.77 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 99.77 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.76 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.76 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.76 | |
| KOG0253|consensus | 528 | 99.75 | ||
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.75 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 99.75 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.75 | |
| KOG0253|consensus | 528 | 99.75 | ||
| PRK11043 | 401 | putative transporter; Provisional | 99.75 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 99.74 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.73 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 99.73 | |
| KOG3764|consensus | 464 | 99.73 | ||
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.73 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 99.73 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 99.71 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 99.71 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.71 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 99.7 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.7 | |
| KOG2615|consensus | 451 | 99.7 | ||
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 99.68 | |
| KOG0252|consensus | 538 | 99.67 | ||
| KOG4686|consensus | 459 | 99.66 | ||
| PRK09848 | 448 | glucuronide transporter; Provisional | 99.66 | |
| KOG2615|consensus | 451 | 99.65 | ||
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 99.64 | |
| KOG0255|consensus | 521 | 99.64 | ||
| PRK09669 | 444 | putative symporter YagG; Provisional | 99.62 | |
| KOG2504|consensus | 509 | 99.62 | ||
| KOG1330|consensus | 493 | 99.62 | ||
| KOG2532|consensus | 466 | 99.61 | ||
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 99.6 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.6 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.59 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 99.59 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 99.59 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 99.59 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 99.59 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.58 | |
| KOG2563|consensus | 480 | 99.58 | ||
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.57 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.56 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 99.56 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 99.56 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 99.55 | |
| KOG4686|consensus | 459 | 99.53 | ||
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 99.53 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 99.52 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 99.51 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 99.51 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 99.5 | |
| PRK11462 | 460 | putative transporter; Provisional | 99.49 | |
| KOG2533|consensus | 495 | 99.48 | ||
| PRK09848 | 448 | glucuronide transporter; Provisional | 99.48 | |
| PRK11462 | 460 | putative transporter; Provisional | 99.47 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 99.47 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 99.46 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 99.46 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 99.46 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 99.44 | |
| KOG3626|consensus | 735 | 99.44 | ||
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 99.43 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.42 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 99.41 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 99.37 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 99.37 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 99.36 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 99.36 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 99.31 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 99.31 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 99.3 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 99.28 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 99.25 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.23 | |
| KOG2816|consensus | 463 | 99.04 | ||
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 99.02 | |
| KOG2816|consensus | 463 | 99.01 | ||
| KOG2325|consensus | 488 | 98.92 | ||
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 98.85 | |
| KOG2325|consensus | 488 | 98.81 | ||
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 98.74 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 98.73 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 98.72 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 98.63 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 98.57 | |
| KOG3762|consensus | 618 | 98.54 | ||
| KOG2563|consensus | 480 | 98.41 | ||
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 98.39 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 98.24 | |
| KOG3098|consensus | 461 | 98.15 | ||
| KOG4332|consensus | 454 | 98.13 | ||
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 98.09 | |
| KOG3098|consensus | 461 | 98.05 | ||
| KOG0637|consensus | 498 | 97.88 | ||
| KOG3810|consensus | 433 | 97.86 | ||
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 97.81 | |
| PF03219 | 491 | TLC: TLC ATP/ADP transporter; InterPro: IPR004667 | 97.68 | |
| KOG3762|consensus | 618 | 97.63 | ||
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 97.63 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 97.58 | |
| KOG0637|consensus | 498 | 97.57 | ||
| KOG3626|consensus | 735 | 97.35 | ||
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 97.25 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 97.21 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 97.2 | |
| PF00854 | 372 | PTR2: POT family; InterPro: IPR000109 This entry r | 97.12 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 97.0 | |
| KOG4332|consensus | 454 | 96.94 | ||
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 96.7 | |
| COG3202 | 509 | ATP/ADP translocase [Energy production and convers | 96.67 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 96.53 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 96.51 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 96.25 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 96.1 | |
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 96.07 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 95.94 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 95.54 | |
| KOG3574|consensus | 510 | 95.5 | ||
| KOG1237|consensus | 571 | 95.09 | ||
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 94.9 | |
| PF13000 | 544 | Acatn: Acetyl-coenzyme A transporter 1; InterPro: | 94.66 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 94.46 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 94.16 | |
| KOG4830|consensus | 412 | 93.37 | ||
| KOG1479|consensus | 406 | 93.28 | ||
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 93.28 | |
| KOG3097|consensus | 390 | 92.48 | ||
| KOG3574|consensus | 510 | 91.06 | ||
| KOG1479|consensus | 406 | 90.92 | ||
| PF07672 | 267 | MFS_Mycoplasma: Mycoplasma MFS transporter; InterP | 89.52 | |
| KOG3430|consensus | 90 | 89.11 | ||
| KOG3810|consensus | 433 | 82.57 |
| >KOG2532|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=317.50 Aligned_cols=340 Identities=36% Similarity=0.748 Sum_probs=312.1
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
..+++++..+.+++.+.+++|++++++++|+++||+|-|+++..+.++.+++.+++|.+...+++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 35789999999999999999999999999999999999999999999999999999988888888889999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-FSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
.+|+...+.+.|.|+++|++..++...+..+|.+++..++|.+.+. +||+..|++.++++++..++++++..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999899999999
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
..+.+|++++++....+..... ...+|+++++++++|.+.+..++..++++.+..|+|.|+++++|++..+.|++.+
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~---~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sa 301 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKK---PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSA 301 (466)
T ss_pred CCCHHHHHHHHhcccccccCCC---CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHH
Confidence 9999999999987665443322 4679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCc--hHHHHHHHHHHhh----------
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS--EVTATMALCLGIE---------- 624 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------- 624 (744)
++.+...+..+++|.++||+.+| .++.+..||++..+++...+++++.+.+.+. .+..++++.++.+
T Consensus 302 lP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~ 380 (466)
T KOG2532|consen 302 LPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFY 380 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhH
Confidence 99999999999999999999999 8899999999999999999999999888773 3344444444333
Q ss_pred ------------------------------------------hhhHHHHHHHHHHHHHHHHHhhhhccCCcCCCCCCCc
Q psy15142 625 ------------------------------------------GRWTVVFLIAATVHFIGITFYAIFASGELQPWAEPTS 661 (744)
Q Consensus 625 ------------------------------------------~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (744)
..|+.+|++.+++.+++.+++.++++.++++|+++++
T Consensus 381 ~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~~~ 459 (466)
T KOG2532|consen 381 KNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKSEE 459 (466)
T ss_pred hhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCCcc
Confidence 4899999999999999999999999999999987543
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=282.10 Aligned_cols=337 Identities=33% Similarity=0.568 Sum_probs=262.2
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhh
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 399 (744)
+++++..+.|++.+++.+++.++++++|+++||+|||+++..+.++++++.++.+.+...+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 68899999999999999999999999999999999999999999988888877544444567789999999999999999
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTI 478 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~ 478 (744)
+....+++|++|+++|++++|+...+..+|..+++.+++.+.+.+ |||+.|++.+++.++..++++.+.+|+|+.++..
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI 229 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC
Confidence 999999999999999999999999999999999999999999884 9999999999988888777777777777665555
Q ss_pred ChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHH
Q psy15142 479 SGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLP 558 (744)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 558 (744)
+++|.+.+.+....+.. +.....+++++++++.+|...+..++...+.+.+.+|+|.|+++.+|++..+++++.++.
T Consensus 230 ~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~ 306 (465)
T TIGR00894 230 SKFEKKYINSSLQGQKG---STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLP 306 (465)
T ss_pred CHHHHHHHHhhcccccC---CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHH
Confidence 55555555433221111 111234689999999999999999999999999999999999988999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhc-cCchHHHHHHHHHHhh-------------
Q psy15142 559 HLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY-TKSEVTATMALCLGIE------------- 624 (744)
Q Consensus 559 ~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------- 624 (744)
.++..++.+++|+++||+++|+.......++....++..+.++.++.... ..+....+++++++.+
T Consensus 307 ~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 386 (465)
T TIGR00894 307 YLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINS 386 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhch
Confidence 99999999999999999987765444333344444433322222222222 1222222211211111
Q ss_pred ---------------------------------------hhhHHHHHHHHHHHHHHHHHhhhhccCCcCCCCCC
Q psy15142 625 ---------------------------------------GRWTVVFLIAATVHFIGITFYAIFASGELQPWAEP 659 (744)
Q Consensus 625 ---------------------------------------~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 659 (744)
.+|..+|++.+++.+++.+++.++.+.+.++|.++
T Consensus 387 ~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~~~ 460 (465)
T TIGR00894 387 LDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWAKE 460 (465)
T ss_pred hhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecceecCCCCC
Confidence 23778899999888888888877777777777643
|
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=263.02 Aligned_cols=347 Identities=14% Similarity=0.138 Sum_probs=274.0
Q ss_pred cceehhhhhhcccccchh--hheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHH
Q psy15142 291 YWQCVVGRNFGSYVSFET--HYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSF 368 (744)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~ 368 (744)
++.+.+.++++....+.+ .+......+.++.++|.++.|++.+++.+.+.++.++.|.++||.+.|+.+..+++++++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 344555555554444444 455455555678889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHH--HHhhhccCc
Q psy15142 369 LHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPIS--AILTEHFSW 446 (744)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~--~~l~~~~gw 446 (744)
..++ ++++++.+.+.++.++.|+++|...|.+...++.|+|+++||+..++.+.+.++|+.+.|++. +.+..+++|
T Consensus 107 ~nil--~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w 184 (448)
T COG2271 107 VNIL--FGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGW 184 (448)
T ss_pred HHHH--HhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccch
Confidence 9999 788889999999999999999999999999999999999999999999999999999999999 888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhh-cccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHH
Q psy15142 447 EAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSL-GSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCR 525 (744)
Q Consensus 447 ~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 525 (744)
|..|++-++++++..++.++..+++|+...-.+-||...-..+. .++.+.+.......-++-+++||.+|.++++.++.
T Consensus 185 ~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfv 264 (448)
T COG2271 185 RAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFV 264 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 99999999999999988888889999875444433321110000 11100000111122345678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh--hcCccchhhHHHHHHHHhHHHHHHHH
Q psy15142 526 SWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLR--KKGILSTTMVRKLFNCGGFGMEAFFF 603 (744)
Q Consensus 526 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g--~r~~~~~~~~r~~~~~~~~~~~~~~~ 603 (744)
...-+++..|.|.|+.+..|+|..+++...+.+-+++++|++++||++||+- ||. ++.++.+++..+++
T Consensus 265 YivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~---------p~~~i~~~~i~~~~ 335 (448)
T COG2271 265 YVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG---------PMALIFMLLITASL 335 (448)
T ss_pred HHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc---------hHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999984 543 55666666666666
Q ss_pred HHHhccCch--HH-HHHHHHHHhh--------------------------------------------------hhhHHH
Q psy15142 604 VVVAYTKSE--VT-ATMALCLGIE--------------------------------------------------GRWTVV 630 (744)
Q Consensus 604 ~~~~~~~~~--~~-~~~~~~~~~~--------------------------------------------------~~~~~~ 630 (744)
+.....++. +. ...++.+|+. .+|...
T Consensus 336 ~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~ 415 (448)
T COG2271 336 VLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGG 415 (448)
T ss_pred HHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcch
Confidence 665555533 32 2233333333 488888
Q ss_pred HHHHHHHHHHHHHHhhhh
Q psy15142 631 FLIAATVHFIGITFYAIF 648 (744)
Q Consensus 631 f~~~a~~~~~~~~~~~~~ 648 (744)
|++..+.++++.++++.+
T Consensus 416 Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 416 FIVLSIAALLAILLLLPV 433 (448)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 988888888877776666
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=242.09 Aligned_cols=238 Identities=18% Similarity=0.225 Sum_probs=216.6
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|+|..+.|++.++|.++..+++++...+.||+.||++++....++.++.++ +++++|++.++++|++.|+..|
T Consensus 39 iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l--~alAp~f~~Ll~aR~~~g~a~G 116 (394)
T COG2814 39 IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL--SALAPSFAVLLLARALAGLAHG 116 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999 8899999999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
.+++...++.++..|+++|++++++...+..++.++|..++.++.+.+|||..|++.++++++..+..+...| |++..
T Consensus 117 ~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~ 194 (394)
T COG2814 117 VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEIS 194 (394)
T ss_pred HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998888877777 22211
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
.. ......+..+++|+|.++...+..++...+.+..++|+..++++..|++....++...
T Consensus 195 ~~--------------------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll 254 (394)
T COG2814 195 GS--------------------LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLL 254 (394)
T ss_pred CC--------------------CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHH
Confidence 00 0001123567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
.+++++++|++++|++.|| +.|
T Consensus 255 ~~Gv~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 255 AFGIAGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred HHHHHHHHHHHHHhhhccc-cch
Confidence 9999999999999999999 554
|
|
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=253.75 Aligned_cols=262 Identities=15% Similarity=0.224 Sum_probs=214.0
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 395 (744)
.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++ .+++++++.+++.|++.|++.
T Consensus 33 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~~~ 110 (412)
T TIGR02332 33 TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTA--TMFATGPESLYLLRILVGIAE 110 (412)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999988 677899999999999999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh------ccCchhHHHHHHHHHHHHHHHHHhhcc
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE------HFSWEAMFYFYGCMGLLWYLCWLWLSF 469 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~~~ 469 (744)
++..+....+++|++|+++|++++++++.+..+|..+++++++.+.+ ..|||+.|++.+++.++..++.+++.|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 111 AGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred hhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999998764 369999999998888777666666778
Q ss_pred cCCCCCCCCChHHHHHHHHhhcccc-c--ccCC--CCC----CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 470 EKPCLHPTISGRELLYIEKSLGSSV-Q--VAMP--TLA----TTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYL 540 (744)
Q Consensus 470 e~p~~~~~~~~~~~~~~~~~~~~~~-~--~~~~--~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 540 (744)
|+|++.+..++++.+...+..+... . .... ... ...+++++ ++.+|...+..++....++.+.+|+|.|+
T Consensus 191 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 269 (412)
T TIGR02332 191 DSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQIL 269 (412)
T ss_pred CCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887655444444333322211110 0 0000 000 11234444 57888888888888889999999999999
Q ss_pred HHh-cCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 541 KST-FHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 541 ~~~-~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
++. .|++..+++.+..+..++.+++.+++|+++||+++|+
T Consensus 270 ~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 270 QSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 872 4678888899999999999999999999999998773
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=270.55 Aligned_cols=335 Identities=13% Similarity=-0.011 Sum_probs=230.1
Q ss_pred cccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy15142 124 QFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVA 202 (744)
Q Consensus 124 ~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (744)
+.+. +.|++.++.+++..+|++++|+++||+ |||+.+++++++.+++.+++++++++++++++|++.|+
T Consensus 198 gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~----------GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~ 267 (742)
T TIGR01299 198 CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL----------GRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGF 267 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3443 349999999999999999999999999 78888889999999999999999999999999999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccC----------------------------------
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRG---------------------------------- 247 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~---------------------------------- 247 (744)
+.|...+...++++|+.|+ +||+.++++++++.+|.++++.+...
T Consensus 268 g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ 347 (742)
T TIGR01299 268 GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA 347 (742)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999985 69999999998888887776542211
Q ss_pred ------CcccchhhHHHh-HhhhHhhhhhhch--------hhH------HH-----------------------------
Q psy15142 248 ------KSTMDADMQQKA-IDATKEGLEKFNI--------ERE------VA----------------------------- 277 (744)
Q Consensus 248 ------~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~------~~----------------------------- 277 (744)
.++.+.+..... .+.+.+.+++... ..+ ..
T Consensus 348 ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (742)
T TIGR01299 348 IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSE 427 (742)
T ss_pred HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhh
Confidence 111111110000 0000011100000 000 00
Q ss_pred -----HHHHHhhhhcCCCcceehhhhhhcccccchhhhee-eecccc---c-----------------------------
Q psy15142 278 -----TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIY-FYLGKV---K----------------------------- 319 (744)
Q Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~----------------------------- 319 (744)
..++..+.++++++.+.+....+.....++....+ +.+... .
T Consensus 428 ~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (742)
T TIGR01299 428 GGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHR 507 (742)
T ss_pred hhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhcc
Confidence 01111222223222233333333333333331111 111000 0
Q ss_pred --cc------cc------------------------------------------------------------------C-
Q psy15142 320 --HI------NW------------------------------------------------------------------T- 324 (744)
Q Consensus 320 --~~------g~------------------------------------------------------------------s- 324 (744)
++ |+ +
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 587 (742)
T TIGR01299 508 GGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDF 587 (742)
T ss_pred ccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccC
Confidence 00 00 0
Q ss_pred ------chhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 325 ------VAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 325 ------~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
.....+...+..++.+++.+++|+++||+|||++++++.++.+++.++ .++.++...+++++++.|++.++.
T Consensus 588 ~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll--~~~~~s~~~ll~~~~l~g~~~~~~ 665 (742)
T TIGR01299 588 DGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFF--LSFGNSESAMIALLCLFGGLSIAA 665 (742)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHHHHHHH
Confidence 001233455667888999999999999999999999999999888877 556667777778888889888888
Q ss_pred hhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
+++..++++|++|++.|++++|+.+....+|.+++|++++.+.+. +...+|++.+++.++.+++.+++ ||+.
T Consensus 666 ~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~ 737 (742)
T TIGR01299 666 WNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDTR 737 (742)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 999999999999999999999999999999999999999988764 45667777777776666655544 7764
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-26 Score=251.10 Aligned_cols=257 Identities=13% Similarity=0.125 Sum_probs=203.9
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++ ...+++++.+++.|++.|++.+.
T Consensus 50 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~g~~~g~ 127 (434)
T PRK11663 50 LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINIL--FGFSSSLWAFALLWVLNAFFQGW 127 (434)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHc
Confidence 5679999999999999999999999999999999999999999999999998887 56788899999999999999998
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
.++...+++.|++|+++|++++++.+.+..+|..+++.+.+.+.+.+|||+.|++.+++.++..++..++.+|+|.+...
T Consensus 128 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~ 207 (434)
T PRK11663 128 GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGL 207 (434)
T ss_pred cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCC
Confidence 89999999999999999999999999999999999999999999999999999998887766655555555776643211
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcH-HHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPW-REFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
...++.+.......++.+. .....+..+ ...++++.+|.+.+..++.......+..|+|.|+++.+|++..+++...+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~ 286 (434)
T PRK11663 208 PSVGEWRHDALELAQQQEG-AGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVS 286 (434)
T ss_pred CCcccccccccccchhccc-cCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 1100000000000000000 000001111 23567888888888777777778888899999997778999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhh
Q psy15142 557 LPHLLMTIVVPCGGMLADHLR 577 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g 577 (744)
...+++.++++++|+++||+.
T Consensus 287 ~~~~~~~~g~~~~g~l~dr~~ 307 (434)
T PRK11663 287 MFELGGFIGALVAGWGSDKLF 307 (434)
T ss_pred HHHHHHHHHHHHHhhhHHHhc
Confidence 999999999999999999994
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=256.95 Aligned_cols=262 Identities=11% Similarity=0.058 Sum_probs=207.6
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH---HhhcChHHHHHHHHHHhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT---AIKLNPGSVIIVRICQGL 393 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~ 393 (744)
..+++|++..+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.+..+. ..+++++.+++.|++.|+
T Consensus 55 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 134 (467)
T PRK09556 55 MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGF 134 (467)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999998888877776655321 235789999999999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc---CchhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF---SWEAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
+.+...|...++++|++|+++||+++|+...+..+|.++++++..++.+.+ +|+..|.+.+++.++..++.+++.++
T Consensus 135 ~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 135 FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999887776643 69999988888877776666666677
Q ss_pred CCCCCCCCChHHHHHHHHhhccccc-ccCCCCC-CCc-HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15142 471 KPCLHPTISGRELLYIEKSLGSSVQ-VAMPTLA-TTP-WREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQ 547 (744)
Q Consensus 471 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s 547 (744)
+|++.+..+.++. ..+....+.. .+..+.. ... .+..+++|.+|...+..++.....+++.+|+|.|+++.+|++
T Consensus 215 ~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s 292 (467)
T PRK09556 215 SPEELGWGKAEEI--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFS 292 (467)
T ss_pred ChhhcCCCChhhc--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 6654433322221 0000000000 0000000 011 223688999999999888888888889999999998889999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 548 IQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 548 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++++..+...++.+++.+++|+++||+++|+
T Consensus 293 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 293 KEDAINTFTLFEIGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 999999999999999999999999999999886
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-25 Score=241.59 Aligned_cols=237 Identities=14% Similarity=0.141 Sum_probs=202.4
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|.++++.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++ ..++++++.+++.|+++|++.+
T Consensus 35 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~~~G~~~~ 112 (390)
T PRK03545 35 IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVL--SALAWNFTVLLISRIGIAFAHA 112 (390)
T ss_pred HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999887 6788999999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|++++|+...+..+|..++|++++.+.+++|||+.|++.++++++..++.+...|+.|++++
T Consensus 113 ~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~ 192 (390)
T PRK03545 113 IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS 192 (390)
T ss_pred HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 88899999999999999999999999999999999999999999999999999999998887776655555555432110
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
+ ...+.+++++++.++...+..++.....+....+.+.|+++..|++..+.+.+..
T Consensus 193 ----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 248 (390)
T PRK03545 193 ----G--------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLL 248 (390)
T ss_pred ----c--------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 0 0112456788888876666666666666666678888888778999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
+..++.++++++.+++.||+++|
T Consensus 249 ~~~~~~~~g~~~~g~l~dr~~~~ 271 (390)
T PRK03545 249 LFGGAGIIGSVLFSRLGNRHPSG 271 (390)
T ss_pred HHHHHHHHHHHHHHHHhhccchh
Confidence 99999999999999999999876
|
|
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-25 Score=238.84 Aligned_cols=262 Identities=25% Similarity=0.402 Sum_probs=218.8
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ .+++++++.+++.|++.|++.+
T Consensus 20 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~ 97 (399)
T TIGR00893 20 LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGL--QAFAGAYVSLYILRVLLGAAEA 97 (399)
T ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHH--HHHHcCHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999999999998888877 5677899999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+|++.|++.+++.++..++.+++.||+|++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (399)
T TIGR00893 98 PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK 177 (399)
T ss_pred hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999888887776666666677655433
Q ss_pred CCChHHHHHHHHhhccc-ccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 477 TISGRELLYIEKSLGSS-VQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
..++++.....+....+ ...+..+......++.+++|+++...+..++.......+..+.|.|+++.+|.++.+.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (399)
T TIGR00893 178 WLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMA 257 (399)
T ss_pred cCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHH
Confidence 33332222111111111 11111122344577889999999988888888899999999999999988899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+...++.+++.++.|++.||+++|+
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999985
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=246.71 Aligned_cols=249 Identities=14% Similarity=0.080 Sum_probs=195.3
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++.++.+++.+++.+++.+++++.|+++||+|||+++..+.++++++.++ .+++++++.+++.|++.|++.+
T Consensus 62 l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~--~~~~~s~~~l~~~r~l~G~~~~ 139 (476)
T PLN00028 62 IRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFC--MSLVSSATGFIAVRFFIGFSLA 139 (476)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999888888877 5677888889999999999887
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh---------ccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE---------HFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~---------~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
... ....+++|++|+++||+++|+.+....+|..+++.+.+.+.. ..|||+.|++.+++.++..++.+++
T Consensus 140 ~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 140 TFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred hhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 654 456688999999999999999988888888877776655432 2589999999999888777666666
Q ss_pred cccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15142 468 SFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQ 547 (744)
Q Consensus 468 ~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s 547 (744)
.++.|+.. .++ .++. ... .+......+++.++++++|.+.+..++.....+.+..++|.|+.+.+|++
T Consensus 219 ~~~~p~~~----~~~---~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s 286 (476)
T PLN00028 219 GQDLPDGN----YRE---LKKS----GTM-PKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLS 286 (476)
T ss_pred cCcCCCCc----hhh---HHhc----Ccc-ccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCC
Confidence 44444321 111 0000 000 00001123566678888888777777666666777888999998878999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 548 IQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 548 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.+++.+.++..++++++++++|+++||+++|.
T Consensus 287 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~ 319 (476)
T PLN00028 287 LETAGAIAASFGLMNLFARPAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhc
Confidence 999999999999999999999999999999874
|
|
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-24 Score=230.66 Aligned_cols=237 Identities=11% Similarity=0.018 Sum_probs=189.5
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.+....+.+. ....+++..+++.|++.|++.+
T Consensus 17 i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~R~l~G~g~~ 94 (368)
T TIGR00903 17 VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGR--LLDPFNYEWLLACQLLAALGQP 94 (368)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHhHhH
Confidence 36789999999999999999999999999999999999998876555544444322 2333689999999999999998
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
. .+.....++|++|+++|++++++.+.+..+|..+++++++.+.+++|||+.|++.++++++..++++++.||+|++++
T Consensus 95 ~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~ 173 (368)
T TIGR00903 95 F-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA 173 (368)
T ss_pred H-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 6 456666779999999999999999999999999999999999999999999999888888877777777788876532
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
+.. +... ...++++++++|.+|.+.+..++....++++.+|+|.|+++ .|++.. .+....
T Consensus 174 ~~~--~~~~----------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~ 233 (368)
T TIGR00903 174 EGF--GFKD----------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVA 233 (368)
T ss_pred CCc--chHH----------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHH
Confidence 100 0000 01136789999999999999999999999999999999976 688864 555555
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
+..+.+.++ .++++||..||
T Consensus 234 l~~~~g~~g---~~~~~d~~~r~ 253 (368)
T TIGR00903 234 LAILAGLIG---VAVIPDRVARA 253 (368)
T ss_pred HHHHHHHHH---HHHhhHHhhhh
Confidence 555555544 57888888765
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-24 Score=234.23 Aligned_cols=236 Identities=11% Similarity=0.088 Sum_probs=197.0
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|+|.++.+++.+++.+++.+++++.|+++||+|||+++..+.++++++.++ .+++++++.+++.|+++|++.+
T Consensus 35 i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~--~~~a~~~~~ll~~r~l~Gig~~ 112 (393)
T PRK09705 35 LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALM--RELYPQSALLLSSALLGGVGIG 112 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHH--HHHCcchHHHHHHHHHHHhHHH
Confidence 36889999999999999999999999999999999999999999999999999998 7789999999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
...+....++.+++| ++|++++|++..+..+|..+++.+++.+.++. +||..+.+.++..++..+..++..++.|+.+
T Consensus 113 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (393)
T PRK09705 113 IIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASS 191 (393)
T ss_pred HHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 999999999999997 88999999999999999999999999988875 8999887776665544333332222222110
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
+ . . +...++.++++..|...+..++...+++.+..|.|.|+++ +|++..+++.+.
T Consensus 192 ~-----------------~---~----~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~ 246 (393)
T PRK09705 192 H-----------------K---T----TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLL 246 (393)
T ss_pred c-----------------C---C----CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHH
Confidence 0 0 0 0011234567777777777777778888899999999987 799999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
++..++.++++++.+++.||+++|+
T Consensus 247 ~~~~i~~i~g~~~~g~l~~r~~~~~ 271 (393)
T PRK09705 247 ALMTLGQAAGALLMPAMARHQDRRK 271 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchH
Confidence 9999999999999999999999874
|
|
| >KOG2533|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=237.79 Aligned_cols=257 Identities=19% Similarity=0.251 Sum_probs=224.8
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.++.+....+.+.+.++++++++++.++++.+.||++-.+.+....+++++..++ .....|++.+++.|++.|+..++
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~--~~~~~s~~~~ialr~llGl~es~ 150 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFL--TAAVHSFPGLIALRFLLGLFESG 150 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHhcc
Confidence 4677888889999999999999999999999999999888888777777776666 45578999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh------hccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT------EHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~------~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
.+|....+++.|+.+++|++.+|++++...+|+++|++++..+. ...|||+.|++.++++++..++.+++.|+.
T Consensus 151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 99999999999999999999999999999999999999998863 357999999999999999999998889999
Q ss_pred CCCCCCCChHHHHHHHHhhcccccccC-CCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Q psy15142 472 PCLHPTISGRELLYIEKSLGSSVQVAM-PTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQE 550 (744)
Q Consensus 472 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 550 (744)
|.+..-.+++|+..+.++.++...... .+.+...+++.+++|.+|..++..++.....+++.+|+|.|+++..|+|..+
T Consensus 231 P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~ 310 (495)
T KOG2533|consen 231 PSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ 310 (495)
T ss_pred hhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH
Confidence 987766677776555444443332221 1144567889999999999999999999999999999999999866799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHh
Q psy15142 551 TGFIGSLPHLLMTIVVPCGGMLADHL 576 (744)
Q Consensus 551 ~~~~~~~~~~~~~i~~~~~g~l~dr~ 576 (744)
++.+..+..++++++.+++|+++||+
T Consensus 311 a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 311 ANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred hccccchHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999995
|
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=245.00 Aligned_cols=331 Identities=11% Similarity=-0.008 Sum_probs=222.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhH--------HHHHHHHHHHhh
Q psy15142 133 GSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVT--------ATMALCLGVAFS 204 (744)
Q Consensus 133 ~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 204 (744)
.++.++++.+|++++|+++||+ |||+++.+++++++++.++++++++.++ ++++|++.|++.
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~----------Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~ 132 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKY----------GRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSV 132 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----------ccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHh
Confidence 4788899999999999999999 8888999999999999999999999764 778899999999
Q ss_pred hcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccC----Ccc--cchhhHHHhHhh-----h-----Hhhh
Q psy15142 205 GFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRG----KST--MDADMQQKAIDA-----T-----KEGL 267 (744)
Q Consensus 205 g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~----~~~--~~~~~~~~~~~~-----~-----~~~~ 267 (744)
|...++..++++|+.|+ +||+..++...+..+|.+++..+... ... .....|+..... . ....
T Consensus 133 g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~ 212 (490)
T PRK10642 133 GGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHAL 212 (490)
T ss_pred HhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999984 79999999988888777766532211 110 111112211100 0 0000
Q ss_pred -hhhchhhHH---------------HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHH
Q psy15142 268 -EKFNIEREV---------------ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAV 331 (744)
Q Consensus 268 -~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 331 (744)
++....... ..++++.+++ +++.+...+...+.....++....+...+..+.+|++..+.+++
T Consensus 213 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 291 (490)
T PRK10642 213 EETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLI 291 (490)
T ss_pred CCChhHHHHHHhhhhhccccccccccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 100000000 0011122211 11122222222221112222222222222345678887777778
Q ss_pred HHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHH-HHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhcc
Q psy15142 332 DSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFV-PTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWA 410 (744)
Q Consensus 332 ~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~ 410 (744)
.+...++..++.+++|+++||+|||+++..+.++..++.+.. ....+++...+++++++.|++.+...+....++.|.+
T Consensus 292 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 371 (490)
T PRK10642 292 IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF 371 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 888889999999999999999999999888776544333221 0123345666777888888887777777888999999
Q ss_pred CccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 411 PPLERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 411 p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
|++.|++++|+.+....+++.++|.+.+.+.+.. +|+.++++..+++++.++..++ .||+|++.
T Consensus 372 p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~~~~ 436 (490)
T PRK10642 372 PTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETANRP 436 (490)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hccccCCC
Confidence 9999999999866666777888999999888754 4777776666666665555544 49998764
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-24 Score=237.46 Aligned_cols=255 Identities=14% Similarity=0.136 Sum_probs=194.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh----cChHHHHHHHHHHhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK----LNPGSVIIVRICQGL 393 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~ 393 (744)
.++ |++..+.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.++ .++. .+++.+++.|++.|+
T Consensus 56 ~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~l~gi 132 (452)
T PRK11273 56 VEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF--MGFVPWATSSIAVMFVLLFLCGW 132 (452)
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHH--HHhhhcccccHHHHHHHHHHHHH
Confidence 345 999999999999999999999999999999999999999999988888876 3333 367778889999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHH-hhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIV-LGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~-ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
+.+..++.....+.|++|+++|++++|+.+.+..+|.. .+|+++..+....|||+.|++.+++.++..++.+++.||+|
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 133 FQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred HHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 99988888888899999999999999999999998874 45554434433459999999988887776666666668776
Q ss_pred CCCCCCChHHHHHHHHhhccc-ccccCCCC-CCCc-HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Q psy15142 473 CLHPTISGRELLYIEKSLGSS-VQVAMPTL-ATTP-WREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQ 549 (744)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 549 (744)
++....+.++.+ ...... .+.+..+. .+.. ...+++++.+|...+..++.....+.+..|+|.|+++..|++..
T Consensus 213 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~ 289 (452)
T PRK11273 213 QSCGLPPIEEYK---NDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD 289 (452)
T ss_pred hhcCCCChhhhh---hccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 543222111110 000000 00000000 0111 12367889999888888888888888889999999987899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy15142 550 ETGFIGSLPHLLMTIVVPCGGMLADHLRK 578 (744)
Q Consensus 550 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~ 578 (744)
+++.+..+..++.+++.+++|+++||+++
T Consensus 290 ~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 290 KSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99988888889999999999999999943
|
|
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-23 Score=242.00 Aligned_cols=222 Identities=13% Similarity=0.134 Sum_probs=168.0
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
..++|++..+.+++.+++.++.+++++++|+++||+|||+++++++++.+++.++ .+++++++.++++|++.|++.++
T Consensus 194 ~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll--~afa~s~~~llv~R~l~G~g~g~ 271 (742)
T TIGR01299 194 EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFF--SSFVQGYGFFLFCRLLSGFGIGG 271 (742)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999998888877 56778899999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-------------cCchhHHHHHHHHHHHHHHHH
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-------------FSWEAMFYFYGCMGLLWYLCW 464 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-------------~gw~~~f~~~~~~~~~~~~~~ 464 (744)
..++..++++|++|++.|++.+++...+..+|.++++.++..+... .+||+.+++.++++++.+++
T Consensus 272 ~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~- 350 (742)
T TIGR01299 272 AIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA- 350 (742)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999887766543 35889888887776655444
Q ss_pred HhhcccCCCCCCCC-ChHHHHHHHHhhccccc--------------------c------cCCCCC---------------
Q psy15142 465 LWLSFEKPCLHPTI-SGRELLYIEKSLGSSVQ--------------------V------AMPTLA--------------- 502 (744)
Q Consensus 465 ~~~~~e~p~~~~~~-~~~~~~~~~~~~~~~~~--------------------~------~~~~~~--------------- 502 (744)
.++.||+|++.... ..++...+.+.....+. . +.....
T Consensus 351 ~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (742)
T TIGR01299 351 LTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGG 430 (742)
T ss_pred HHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhh
Confidence 45569999863221 11222111111111000 0 000000
Q ss_pred -CCcHHHHhhc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 503 -TTPWREFAHS---MPVYAIIVANFCRSWNFYLLVLFQASYLKS 542 (744)
Q Consensus 503 -~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 542 (744)
...++++++. +..+.+++.+|+..++++++..|+|.++..
T Consensus 431 ~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 431 IWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred HHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0024445544 344677888899999999999999988644
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-23 Score=228.87 Aligned_cols=238 Identities=14% Similarity=0.142 Sum_probs=199.1
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++.++.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.++ .+++++++.+++.|++.|++.+
T Consensus 29 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l--~~~~~~~~~l~~~r~l~G~~~~ 106 (382)
T PRK10091 29 LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM--FTLSSSYLMLAIGRLVSGFPHG 106 (382)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH--HHHhCcHHHHHHHHHHHHhhhH
Confidence 35789999999999999999999999999999999999999999999999998887 6788999999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|++++++...+..+|..++|.+++.+.+..|||+.|++.+++.++..+..++..||.+++.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~ 186 (382)
T PRK10091 107 AFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK 186 (382)
T ss_pred HHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 88888889999999999999999999999999999999999999998999999999988777666555555566432110
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
.+. + ...+.++++..|...+..++...+.+....+.+.++++.+|+++.+.+++.+
T Consensus 187 -~~~----------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 242 (382)
T PRK10091 187 -GGL----------------------R-EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMM 242 (382)
T ss_pred -cCH----------------------H-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 000 0 0123466777776665555555555566667777887778999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+..++.++++++.+++.||+++|+
T Consensus 243 ~~~~~~~ig~~~~g~l~~r~~~~~ 266 (382)
T PRK10091 243 LVGLGMVLGNLLSGRLSGRYSPLR 266 (382)
T ss_pred HHHHHHHHHhHHHheeccccCchh
Confidence 999999999999999999999875
|
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-23 Score=233.65 Aligned_cols=237 Identities=17% Similarity=0.263 Sum_probs=178.6
Q ss_pred HHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHH--------HHHHHHHHhhhhhhhhhHHh
Q psy15142 332 DSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGS--------VIIVRICQGLVEGVCYPAVH 403 (744)
Q Consensus 332 ~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~G~~~~~~~~~~~ 403 (744)
.++..++..++++++|+++||+|||+++.++.++++++.++ +++++++.. ++++|+++|++.|+.++...
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~--~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~ 140 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFC--IGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGAS 140 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH--HHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHH
Confidence 47778899999999999999999999999999999999988 678888754 78899999999999999999
Q ss_pred HHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh--------hccCchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 404 GIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT--------EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 404 ~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
++++|++|+++||++.++...+..+|..+++.+...+. ..+|||+.|++.+++.++..+ .....||+|++.
T Consensus 141 ~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~-~~~~~~esp~~~ 219 (490)
T PRK10642 141 IFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY-LRHALEETPAFQ 219 (490)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH-HHHcCCCChhHH
Confidence 99999999999999999999888888888876665443 257999999997766554333 334557876542
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhc-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHS-MPV-YAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF 553 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 553 (744)
... +..++... +. ..+....++++++++ +.. .......++....++.+..|+|.|+++.+|++..+.++
T Consensus 220 ~~~-----~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 290 (490)
T PRK10642 220 QHV-----DKLEQGDR-EG---LQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVL 290 (490)
T ss_pred HHH-----Hhhhhhcc-cc---ccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 110 00000000 00 001123356666653 222 22233344556778888899999998778998888887
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
......++..++.++.|+++||+|||+
T Consensus 291 ~~~~~~~~~~~~~~~~g~l~dr~grr~ 317 (490)
T PRK10642 291 IIIAIMIGMLFVQPVMGLLSDRFGRRP 317 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 777888889999999999999999985
|
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=228.68 Aligned_cols=244 Identities=15% Similarity=0.098 Sum_probs=198.6
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 395 (744)
...+++|++.++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++ .+++++++.+++.|++.|++.
T Consensus 28 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~ 105 (377)
T TIGR00890 28 PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTF--YAIADSLAALYLTYGLASAGV 105 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHH--HHHHHHHHHHHHHHHHHhHHH
Confidence 346789999999999999999999999999999999999999999999999998877 678889999999999999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
+..++....++.+++| ++|+++.++...+..+|..+++.+.+.+.+..|||+.|++.+++.++..+..+++.+++|++.
T Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (377)
T TIGR00890 106 GIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL 184 (377)
T ss_pred HHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc
Confidence 9888888888999987 679999999999999999887777777777889999999999888877766666655443221
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
...+ ++ ........++.++++.++...+..++..........+.+.|.++ +|.+..+.+.+.
T Consensus 185 ~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (377)
T TIGR00890 185 IKTN-IE----------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAV 246 (377)
T ss_pred cccC-cc----------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence 1000 00 00011235677888888877776666666666666667777765 788888889999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
++..++.++++++.|++.||++||+
T Consensus 247 ~~~~~~~~~~~~~~g~l~dr~g~~~ 271 (377)
T TIGR00890 247 SISSIFNGGGRPFLGALSDKIGRQK 271 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999885
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-23 Score=227.08 Aligned_cols=235 Identities=11% Similarity=0.095 Sum_probs=195.9
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|+++++.++..+++.++..+++++.|+++||+|||+++..+.++.+++.++ ...+++++.+++.|++.|++.+
T Consensus 46 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~~~g 123 (394)
T PRK10213 46 MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLL--VSFANSFSLLLIGRACLGLALG 123 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHH--HHHHChHHHHHHHHHHHHHhhH
Confidence 35789999999999999999999999999999999999999999999999998877 5677899999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|+++.++...+.++|..++|.+++.+.+.+|||+.|++.+++++++.+......||++++.+
T Consensus 124 ~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~ 203 (394)
T PRK10213 124 GFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS 203 (394)
T ss_pred HHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999887776655444444455432110
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCChhhHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQ-ASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~l~~~~g~s~~~~~~~~ 555 (744)
. .....++.+++|.++...+..++...+.+....+. |.|.+ .+|+++.+.+.+.
T Consensus 204 ~------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~ 258 (394)
T PRK10213 204 H------------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMN-LAGFGVDGLTLVL 258 (394)
T ss_pred c------------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHH
Confidence 0 01124567888988877666666666666666666 55554 5799999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhh
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRK 578 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~ 578 (744)
....++.+++.++.+++.||.++
T Consensus 259 ~~~~~~~iig~~~~~~l~~r~~~ 281 (394)
T PRK10213 259 LSFGIASFVGTSLSSFILKRSVK 281 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999998543
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-23 Score=231.06 Aligned_cols=242 Identities=20% Similarity=0.225 Sum_probs=195.2
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ..++++++.+++.|++.|++.+.
T Consensus 42 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~~ 119 (406)
T PRK11551 42 AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLA--TAQAWDFPSLLVARLLTGVGLGG 119 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHhhHHH
Confidence 5789999999999999999999999999999999999999999999888888776 56778999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+|++.|++.+++.++..++..++.||+|++...
T Consensus 120 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (406)
T PRK11551 120 ALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQA 199 (406)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhc
Confidence 99999999999999999999999999999999999999998888888999999988877666655555556776543211
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhh---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAH---SMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 554 (744)
...++. .....+..++ .+..+.+.+..++.....+.+..+.|.|+++ .|+++.+.+.+
T Consensus 200 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~ 260 (406)
T PRK11551 200 AGAGKQ------------------RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLV 260 (406)
T ss_pred cCcchh------------------hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHH
Confidence 100000 0001111221 1233344444555556667778889999987 69999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 555 GSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 555 ~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+...++.+++.++.|++.||+++|+
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~ 286 (406)
T PRK11551 261 QIAFNIGGALGSLLIGALMDRLRPRR 286 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999874
|
|
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-23 Score=231.44 Aligned_cols=234 Identities=15% Similarity=0.147 Sum_probs=179.6
Q ss_pred cCchhhHHH---HHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcCh--------HHHHHHHHHH
Q psy15142 323 WTVAQESAV---DSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP--------GSVIIVRICQ 391 (744)
Q Consensus 323 ~s~~~~~~~---~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~ 391 (744)
.+..+.+.. .+...++..++++++|+++||+|||+++..+.++++++.++ .++++++ ..++++|+++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~R~l~ 134 (432)
T PRK10406 57 NTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLV--IACLPGYETIGTWAPALLLLARLFQ 134 (432)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HhhcCCchhHHHHHHHHHHHHHHHH
Confidence 444443333 34445555599999999999999999999999999999988 5666665 3588999999
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh--------hccCchhHHHHHHHHHHHHHHH
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT--------EHFSWEAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~--------~~~gw~~~f~~~~~~~~~~~~~ 463 (744)
|++.|+.++...++++|++|+++|+++.++.+.+...|..+++.+...+. +.+|||+.|++.+++.++...+
T Consensus 135 G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~ 214 (432)
T PRK10406 135 GLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWL 214 (432)
T ss_pred HhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888888887665543 2579999999887776654332
Q ss_pred HHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q psy15142 464 WLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFC-RSWNFYLLVLFQASYLKS 542 (744)
Q Consensus 464 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~ 542 (744)
....||+|++ |.+.. ....++++++++++.+...+..++ ....++.+..|+|.|+++
T Consensus 215 -~~~~~e~~~~-------~~~~~--------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~ 272 (432)
T PRK10406 215 -RRQLDETSQQ-------ETRAL--------------KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVN 272 (432)
T ss_pred -HhcCCCCchH-------HHhhh--------------cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333554321 10000 012257788888888766655544 366778888999999988
Q ss_pred hcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 543 TFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 543 ~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+|++..+.+...++..++..++.++.|+++||++||+
T Consensus 273 ~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~ 310 (432)
T PRK10406 273 TAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT 310 (432)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 78999888888888888888889999999999999884
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-23 Score=232.84 Aligned_cols=261 Identities=13% Similarity=0.048 Sum_probs=210.7
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.+..+.+|+.++|.++..++++++|+++||+|||++++.+.++++++.++ ++.++|++.++++|+++|++.+.
T Consensus 33 ~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~--~~~a~~~~~li~~r~l~G~g~~~ 110 (495)
T PRK14995 33 SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLA--AAFSPTASWLIATRALLAIGAAM 110 (495)
T ss_pred HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999988 67889999999999999999999
Q ss_pred hhhHHhHHhhhcc-CccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 398 CYPAVHGIWRFWA-PPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 398 ~~~~~~~~~~e~~-p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
..+.....+.+.+ |+++|++++|+......+|..+||.+++.+.+++|||+.|++...++++..++..++.|+++.+..
T Consensus 111 ~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~ 190 (495)
T PRK14995 111 IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRD 190 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 8888888777765 679999999999999999999999999999999999999999888877776666666677553321
Q ss_pred -CCChHHHHH-----------HHHhhccccc--------------------ccCCCCCCCcHHHHhhcHHHHHHHHHHHH
Q psy15142 477 -TISGRELLY-----------IEKSLGSSVQ--------------------VAMPTLATTPWREFAHSMPVYAIIVANFC 524 (744)
Q Consensus 477 -~~~~~~~~~-----------~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 524 (744)
..+..+... +......... .+.....+.-..+++++|.++...+..++
T Consensus 191 ~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~ 270 (495)
T PRK14995 191 QPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMT 270 (495)
T ss_pred CCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHH
Confidence 122111100 0000000000 00000111122467889988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 525 RSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 525 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.....++...+.|.|++..+|+++.++++...+..++..++.++.|++.||+++|+
T Consensus 271 ~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 326 (495)
T PRK14995 271 AMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL 326 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 88888888899999999999999999999999999999999999999999999863
|
|
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=215.99 Aligned_cols=240 Identities=14% Similarity=0.169 Sum_probs=208.7
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc---ChHHHHHHHHHHh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL---NPGSVIIVRICQG 392 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G 392 (744)
.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++...+.++..+-.+. .+++. +.+.+++++++.|
T Consensus 39 ~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~--~~~a~~~~~~~~ll~~gll~G 116 (417)
T COG2223 39 FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLG--LAFAVTYPSTWQLLVIGLLLG 116 (417)
T ss_pred hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHH--HHHHccCCchHHHHHHHHHHh
Confidence 345899999999999999999999999999999999999999999999998888877 34443 3459999999999
Q ss_pred hhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC---chhHHHHHHHHHHHHHHHHHhhcc
Q psy15142 393 LVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS---WEAMFYFYGCMGLLWYLCWLWLSF 469 (744)
Q Consensus 393 ~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~~~~ 469 (744)
++ |+.+.+...+++++||++++|.++|++. .+++|..+..++++.+....| |+....+..+..++..++.++...
T Consensus 117 ~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 117 LA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred cc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98 5566788999999999999999999999 999999999999999999888 999999998888887777777766
Q ss_pred cCCCCCCCCChHHHHHHHHhhcccccccCCCCCC-CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q psy15142 470 EKPCLHPTISGRELLYIEKSLGSSVQVAMPTLAT-TPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQI 548 (744)
Q Consensus 470 e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 548 (744)
+.|......+ ... ...+.++++++.|.+++.++..+.++.++..++|.|+++++|.++
T Consensus 195 d~p~~r~~~~---------------------~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~ 253 (417)
T COG2223 195 DVPEHRASVK---------------------PQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSP 253 (417)
T ss_pred CChhhhcccc---------------------ccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 6654211100 001 346778889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 549 QETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 549 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+++.+.....+.+.+.++++|+++||+|.++
T Consensus 254 ~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r 285 (417)
T COG2223 254 VTAGLIAFLFPLIGALARPLGGWLSDRIGGRR 285 (417)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhhhhccchh
Confidence 99999999999999999999999999999885
|
|
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-23 Score=229.41 Aligned_cols=256 Identities=14% Similarity=0.126 Sum_probs=197.3
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh----cChHHHHHHHHHHhhhh
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK----LNPGSVIIVRICQGLVE 395 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~~~ 395 (744)
+.|+++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++. ... .+...+.+.|++.|++.
T Consensus 55 ~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~l~g~~~ 132 (438)
T TIGR00712 55 EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLM--GFVPWATSSIAIMFVLLFLNGWFQ 132 (438)
T ss_pred HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHH--hccccccchHHHHHHHHHHHHHHh
Confidence 359999999999999999999999999999999999999999988888887663 332 45667788899999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh-hccCchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT-EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCL 474 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~ 474 (744)
+..++....++.|++|+++|++++|+.+.+..+|..+++.+.+.+. ...+||..|++.+++.++..++.+++.||+|++
T Consensus 133 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 212 (438)
T TIGR00712 133 GMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQS 212 (438)
T ss_pred hcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHh
Confidence 9888989999999999999999999999999999999988776544 457999999999888887766666666776653
Q ss_pred CCCCChHHHHHHHHhhcccccccCCCC-CC-CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHH
Q psy15142 475 HPTISGRELLYIEKSLGSSVQVAMPTL-AT-TPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETG 552 (744)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 552 (744)
.+..+.++.+. +......+..+.+. .+ ...+.+++++.+|...+..++.....+++.+|.|.|+++..|+++.+++
T Consensus 213 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 290 (438)
T TIGR00712 213 CGLPPIEEYRN--DYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSS 290 (438)
T ss_pred cCCCCchhccc--ccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHH
Confidence 22111110000 00000000000000 00 1122467889999888877777778888889999999987899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 553 FIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 553 ~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
+...+..+.++++.+++|+++||++++
T Consensus 291 ~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 291 WAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999654
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.5e-23 Score=223.23 Aligned_cols=243 Identities=13% Similarity=0.092 Sum_probs=206.5
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ....++++.+++.|++.|++.+
T Consensus 31 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~ 108 (385)
T TIGR00710 31 IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG--LALSNNIETLLVLRFVQAFGAS 108 (385)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHcchh
Confidence 35789999999999999999999999999999999999999999999998888877 5677889999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|+++.++.+....+|..+++.+++.+.+..+|+..|++.+++.++..++.++..||++++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (385)
T TIGR00710 109 AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEA 188 (385)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999998999999999888877776666666566543321
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
..+.++ ....+++++++++++...+.........+....+.|.++++.+|+++.+.+.+.+
T Consensus 189 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 249 (385)
T TIGR00710 189 RIQIST-------------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFA 249 (385)
T ss_pred cCCHHH-------------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHH
Confidence 110000 0123566788888887777766666777777888899998778999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
...++.+++.++.|++.||+++|+
T Consensus 250 ~~~~~~~~~~~~~g~l~~~~~~~~ 273 (385)
T TIGR00710 250 LNIIAMIFGGFLNGRFIKKWGAKS 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999874
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-22 Score=219.86 Aligned_cols=244 Identities=13% Similarity=0.116 Sum_probs=204.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++ ....++++.+++.|++.|++.+.
T Consensus 18 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~l~g~~~~~ 95 (377)
T PRK11102 18 AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVA--CALAQTIDQLIYMRFLHGLAAAA 95 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999888887 56778899999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.|++.+++.++..++..+..||++++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (377)
T PRK11102 96 ASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERR 175 (377)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccccc
Confidence 99999999999999999999999999999999999999999999989999999988888777766665555665432111
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
.+. +.+ ....++++.++++.++..++..++...+.+.+..+.|.++.+.+|+++.+.+.+..+
T Consensus 176 ~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 238 (377)
T PRK11102 176 QPF-HLR----------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFAL 238 (377)
T ss_pred CCC-ChH----------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHH
Confidence 000 000 001235567888888777666666666677777777888887789999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++.+++.++++++.||+++|+
T Consensus 239 ~~~~~~~~~~~~g~l~~r~g~~~ 261 (377)
T PRK11102 239 NIVFLFVMTIINSRFVRRVGALN 261 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHH
Confidence 99999999999999999999885
|
|
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-22 Score=221.97 Aligned_cols=241 Identities=17% Similarity=0.127 Sum_probs=198.0
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ...+++.+.+++.|++.|++.+.
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~--~~~~~~~~~~~~~~~l~g~~~~~ 107 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL--CSLAETSSLFLAGRFLQGIGAGC 107 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH--HHHhCcHHHHHHHHHHHHhhhhH
Confidence 5778999999999999999999999999999999999999999999998888877 56778888889999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..||++.|++.+++.++..++.++..||++++.+.
T Consensus 108 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 187 (392)
T PRK10473 108 CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAP 187 (392)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 89999999999999999999999999999999999999999988888999999999888777766666665665432110
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
. +. ......++.++++.++...+...+.......+..+.|.++++.+|+++.+.+.+.+.
T Consensus 188 ~---~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 247 (392)
T PRK10473 188 A---AS-----------------SKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMAL 247 (392)
T ss_pred C---cc-----------------chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHH
Confidence 0 00 001123456777777655554444444455566677888887789999999999899
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++.+++.++.+++.||+++|+
T Consensus 248 ~~~~~i~~~~~~~~l~~r~g~~~ 270 (392)
T PRK10473 248 TAGVSMTVSFSTPFALGIFKPRT 270 (392)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHH
Confidence 99999999999999999999874
|
|
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-22 Score=221.79 Aligned_cols=243 Identities=12% Similarity=0.034 Sum_probs=201.8
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+++.+.++..+++.+++.+++++.|+++||+|||+++..+.++.+++.++ ...+++++.+++.|++.|++.+.
T Consensus 40 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~G~~~~~ 117 (406)
T PRK15402 40 VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLA--ILLAQSIEQFTLLRFLQGIGLCF 117 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHhHhhh
Confidence 5789999999999999999999999999999999999999999999888888877 56778899999999999999988
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|+++.++......+|..++|.+++.+.++.+|++.|++.+++.++..+..++..||++++.+.
T Consensus 118 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (406)
T PRK15402 118 IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGE 197 (406)
T ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 88889999999999999999999998888899999999999999989999999998888877766555555665432111
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
. .+... ...+++.++++|.++...+..++..........+.|.|+.+.+|+++.+.+.....
T Consensus 198 ~--~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~ 259 (406)
T PRK15402 198 K--LSLKE----------------LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVP 259 (406)
T ss_pred c--ccHHH----------------HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHH
Confidence 0 00000 11235678889998887777666666666677778988887789999998888877
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++.+++.++.+++.||+++|+
T Consensus 260 ~~~~~~~g~~~~g~l~~r~~~~~ 282 (406)
T PRK15402 260 VFGALIAGNLTLARLTSRRPLRS 282 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHH
Confidence 78888999999999999999874
|
|
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=231.52 Aligned_cols=254 Identities=13% Similarity=0.120 Sum_probs=192.8
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHH-HHHHHhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVII-VRICQGLVEG 396 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~~~~ 396 (744)
.+++|++.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++ ++++++++.+++ .|++.|++.+
T Consensus 46 ~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~l~G~~~~ 123 (455)
T TIGR00892 46 QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMIL--ASFSSNVIELYLTAGFITGLGLA 123 (455)
T ss_pred HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHhcch
Confidence 5789999999999999999999999999999999999999999999888888877 567778877754 5689999988
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.+++| ++|+++.|+.+.+..+|..++|.+++.+.+.+|||+.|++.+++.++..+..+++.++.+.++.
T Consensus 124 ~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 202 (455)
T TIGR00892 124 FNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRV 202 (455)
T ss_pred hhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 776777788899996 7899999999999999999999999999999999999999998877665555555433221110
Q ss_pred CCChHHHHHHHHh-hccccc-cc-CCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Q psy15142 477 TISGRELLYIEKS-LGSSVQ-VA-MPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF 553 (744)
Q Consensus 477 ~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 553 (744)
...+++ +..... ..++.. .. .....+....+++++|.++...+..++...+.+....++|.|+++ .|++..+++.
T Consensus 203 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~ 280 (455)
T TIGR00892 203 SKSKSK-EGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAF 280 (455)
T ss_pred cccccc-ccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHH
Confidence 000000 000000 000000 00 000001111257788999888887777778888888899999987 6999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHh
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHL 576 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~ 576 (744)
+.++.+++.+++++++|++.||.
T Consensus 281 ~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 281 LLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999974
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=226.78 Aligned_cols=261 Identities=16% Similarity=0.158 Sum_probs=211.5
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++.+++.++ ++.+++++.+++.|+++|++.+.
T Consensus 29 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~G~~~~~ 106 (485)
T TIGR00711 29 AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL--CGVAPNLELMIIFRVIQGFGGGP 106 (485)
T ss_pred HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHhhhhh
Confidence 5788999999999999999999999999999999999999999999999999888 67888999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC-
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP- 476 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~- 476 (744)
..+...+++.|++|+++|+++.+++.....+|..++|.+++.+.+++|||+.|++.++++++..++..++.|++++...
T Consensus 107 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (485)
T TIGR00711 107 LIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASE 186 (485)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccC
Confidence 9999999999999999999999999999999999999999999999999999999888877776666666565433221
Q ss_pred CCChHHHHH-------HHH--hhcccccc-----------------------cCCCCCCCcHHHHhhcHHHHHHHHHHHH
Q psy15142 477 TISGRELLY-------IEK--SLGSSVQV-----------------------AMPTLATTPWREFAHSMPVYAIIVANFC 524 (744)
Q Consensus 477 ~~~~~~~~~-------~~~--~~~~~~~~-----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 524 (744)
..+...... ... ...+.... +.....+....++++++.++...+..++
T Consensus 187 ~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (485)
T TIGR00711 187 NFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSL 266 (485)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHH
Confidence 111111000 000 00000000 0000111122457888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 525 RSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 525 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+..+...+++|.|+++.+|+++.++++...+..++.+++.+++|++.||+++|+
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 322 (485)
T TIGR00711 267 LGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK 322 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH
Confidence 88888888999999999989999999999999999999999999999999999873
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=226.92 Aligned_cols=261 Identities=15% Similarity=0.120 Sum_probs=208.8
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ...+++++.+++.|++.|++.+
T Consensus 21 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~ 98 (379)
T TIGR00881 21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF--FGFSTSLWVMAALWALNGIFQG 98 (379)
T ss_pred HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHhhcc
Confidence 35778999999999999999999999999999999999999999999999988888 5677899999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhH-HHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGL-PISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~-~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
...+...+++.|++|+++|+++.++.+.+..+|..+++ .+++.+.+..+|++.|++.+++.++..++.+++.+|+|+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T TIGR00881 99 MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC 178 (379)
T ss_pred ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc
Confidence 99999999999999999999999999999999999999 57777777889999999888887776666666667665432
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
+....++....+.....+...+.....+..++.++++|.++.+.+..++.......+..+.|.|+++.+|+++.+.+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 258 (379)
T TIGR00881 179 GLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAF 258 (379)
T ss_pred ccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 21111110000000000000001111122456778899999888888888888888899999999888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
++..++.+++.++.+++.||..++
T Consensus 259 ~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 259 TLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHcchhHHHHHHHHHHHcCC
Confidence 999999999999999999987544
|
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-25 Score=226.48 Aligned_cols=361 Identities=12% Similarity=0.042 Sum_probs=252.5
Q ss_pred hhhhHHHHHhhcc--eeEeeccccchhh------hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchh
Q psy15142 95 SKRYTMATLTCVG--FIISFGMKCNLGF------AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMV 165 (744)
Q Consensus 95 ~~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~g 165 (744)
.++.+++++++.. +..++..+.++.. ...++|.. .|++.++.++.+.++..+.|.++||.+.
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~np--------- 93 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNP--------- 93 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC---------
Confidence 4566677766653 3344444554431 22235543 4999999999999999999999999954
Q ss_pred hhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhh
Q psy15142 166 RKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIG 244 (744)
Q Consensus 166 Rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~ 244 (744)
|.++.+|+++.++..+++++.++.+.+.++.+++|.+||..+|++..+++.+.|+ +||+..|+.|.++|+|+.+.+.+
T Consensus 94 -r~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~ 172 (448)
T COG2271 94 -RYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLV 172 (448)
T ss_pred -ceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHH
Confidence 4477899999999999999999999999999999999999999999999998885 79999999999999998877654
Q ss_pred cc--CCcccchhhHHHh-H---hh---------hHh--------hhhhhchhh-HH------HH--HHHHhhh---hcCC
Q psy15142 245 RR--GKSTMDADMQQKA-I---DA---------TKE--------GLEKFNIER-EV------AT--YIKQYFE---NAYG 289 (744)
Q Consensus 245 ~~--~~~~~~~~~~~~~-~---~~---------~~~--------~~~~~~~~~-~~------~~--~~~~~~~---~~~~ 289 (744)
.. .......+..... . .. .++ ..++...+. +. .+ ..++.+. -+++
T Consensus 173 ~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk 252 (448)
T COG2271 173 ALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNK 252 (448)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcCh
Confidence 41 1111111111000 0 00 000 000000000 00 00 0011111 1222
Q ss_pred CcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc--CCchhhHHHHH-HH
Q psy15142 290 PYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY--PANRIFGTAIA-CT 366 (744)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~--Grr~~l~~~~~-~~ 366 (744)
..|.+.++-.+...+.+...-. .+++..+..|++..++++..+++-++.+.|.+++|+++||+ |||....+.+. +.
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW-~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDW-GPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh-HHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 3455555555555555544221 22333567788899999999999999999999999999996 77766544333 33
Q ss_pred HHHHHHHHHHhhc--ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhh-HHHhhHHHHHHhhhc
Q psy15142 367 SFLHLFVPTAIKL--NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYA-GIVLGLPISAILTEH 443 (744)
Q Consensus 367 ~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~-g~~ig~~i~~~l~~~ 443 (744)
.++.+. ...++ |+.+..++.+..|+...+..-.......|..|++.-|++.|+...+.++ |.+.+....|++.|.
T Consensus 332 ~~~~~~--~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 332 TASLVL--YWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHH--HHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 333333 33333 4577888888999998888878888899999999999999999999999 999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 444 FSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 444 ~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
+||...|.+..+.++++.++...+.
T Consensus 410 ~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 410 WGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888877766655443
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=222.68 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=193.1
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+|.++.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.++ ..++++++.+++.|++.|++.+.
T Consensus 34 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l--~~~~~~~~~~~~~~~l~G~~~g~ 111 (394)
T PRK03699 34 AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAG--LMFSHSLALFSIAMFVLGVVSGI 111 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HHHcchHHHHHHHHHHHHHhhHh
Confidence 5789999999999999999999999999999999999999999999988888877 56778899999999999999998
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-ccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-HFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
..+...+++.|++|+++|+.+++..+....+|..++|.+.+.+.. ..|||+.|.+.+++.++..++.++ .+.|+..+
T Consensus 112 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~ 189 (394)
T PRK03699 112 TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGK 189 (394)
T ss_pred hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccc
Confidence 888899999999999999999999988889999999999887764 579999999888877665544332 22222111
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
..++ +.. ...+. ..++.++...+..++.....+.+..|+|.|+++.+|+++.+++.+.+
T Consensus 190 ~~~~------------~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 248 (394)
T PRK03699 190 HAPK------------ADK----PVAKE-----KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVS 248 (394)
T ss_pred cCcc------------ccC----ccccc-----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHH
Confidence 0000 000 00011 11356666677777777777888899999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
...++..+++++.++++||+++|+
T Consensus 249 ~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 249 NFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhh
Confidence 999999999999999999999885
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=228.12 Aligned_cols=255 Identities=16% Similarity=0.133 Sum_probs=180.7
Q ss_pred ccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC------hHHHHHHHHHHhhhh
Q psy15142 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN------PGSVIIVRICQGLVE 395 (744)
Q Consensus 322 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~ 395 (744)
+.+..+.+++.+.+.++..++++++|+++||+|||+++.++.++..++.++ .+.+.+ ++.++++|++.|++.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~r~l~G~~~ 129 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVA--SGLSPGSSPKSVMATLCFWRFWLGVGI 129 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH--HHHccCcccchHHHHHHHHHHHHHHHH
Confidence 445667789999999999999999999999999999999999998888877 445544 678999999999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-----------------------ccCchhHHHH
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-----------------------HFSWEAMFYF 452 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-----------------------~~gw~~~f~~ 452 (744)
++..+...++++|++|++.|++++++.+....+|..+++.++..+.. .++||+.+.+
T Consensus 130 g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 130 GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 99999999999999999999999999999999999999988876532 2479999988
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCC--CCChH-HHHHHHHhhccc--cccc-------CCCCCCCcHHHHhhc---HH---
Q psy15142 453 YGCMGLLWYLCWLWLSFEKPCLHP--TISGR-ELLYIEKSLGSS--VQVA-------MPTLATTPWREFAHS---MP--- 514 (744)
Q Consensus 453 ~~~~~~~~~~~~~~~~~e~p~~~~--~~~~~-~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~l~~~---~~--- 514 (744)
.++++++..+.. ++.||+|++.. ..+++ ..+.+.+....+ ...+ ..+....++++++++ ++
T Consensus 210 ~~ip~~i~~~~~-~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 288 (502)
T TIGR00887 210 GAVPALLALYFR-LTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGK 288 (502)
T ss_pred HHHHHHHHHHHH-HhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHH
Confidence 887776655544 55699998632 22222 222122111100 0000 000112357777653 11
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH------------HHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 515 -VYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF------------IGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 515 -~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
++.+....++..+.+++...+.|.++++ .|++....+. ...+..++.+++.+++++++||+|||+
T Consensus 289 ~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~ 366 (502)
T TIGR00887 289 HLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP 366 (502)
T ss_pred HHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Confidence 1222333444555667777788999976 6876542211 123344566778899999999999985
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-22 Score=216.57 Aligned_cols=245 Identities=10% Similarity=-0.037 Sum_probs=192.3
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHh-hcChHHHHHHHHHHhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAI-KLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~G~~~~ 396 (744)
+++|++.++.+++.+.+.++..++++++|+++||+|||+++..+.++.+++.++.. ... ..+++.+++.|++.|++.+
T Consensus 41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~ 120 (402)
T TIGR00897 41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP 120 (402)
T ss_pred HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence 67899999999999999999999999999999999999999999998888765421 122 2467788889999999988
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHH-HhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGI-VLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~-~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
...+...+++.+++|+++|++++|+.+.+..+|. .++|.+++.+.+.+||+..++......++..++.+++.++.+++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (402)
T TIGR00897 121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ 200 (402)
T ss_pred HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 8888888889999999999999999999999997 589999999988889776666554444443344444444432111
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
...++++. ......++.++++|.++...+..++.....+++.++.|.|+++ +|++..+.+.+.
T Consensus 201 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~ 263 (402)
T TIGR00897 201 HMQTREKF----------------SELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIW 263 (402)
T ss_pred cccCCcch----------------hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHH
Confidence 10000000 0001235678899999988888888888888899999999976 799999998888
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+...++..++.++.|+++||+++|+
T Consensus 264 ~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 264 GTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchh
Confidence 8889999999999999999999875
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=219.16 Aligned_cols=253 Identities=15% Similarity=0.165 Sum_probs=196.8
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-ChHHHHHHHHHHhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL-NPGSVIIVRICQGLVE 395 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~ 395 (744)
..+++|++..+.+++.+++.+++.++++++|+++||+|||++++++.++.+++.++ .++++ +++.+++.|++.|++.
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~g~~~ 105 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW--AGLAVQSYSVLLLLRLFIGIAG 105 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999999999999999999999999999998887 56777 8999999999999985
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh----------ccCchhHH-HHHHHHHHHHHHHH
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE----------HFSWEAMF-YFYGCMGLLWYLCW 464 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~----------~~gw~~~f-~~~~~~~~~~~~~~ 464 (744)
+ ..+....+++|++|+++|+++.++......+|..+++.+++.+.. ..+||+.| +..+++.++..++.
T Consensus 106 ~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 184 (366)
T TIGR00886 106 G-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLI 184 (366)
T ss_pred h-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHH
Confidence 5 456678899999999999999999998888888888888876654 24899998 44455555554554
Q ss_pred HhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15142 465 LWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTF 544 (744)
Q Consensus 465 ~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 544 (744)
+.+.+|+|++.+...+.+. ..... ...+.......+.+++|+++...+..++.....+.+..+.|.|+++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
T TIGR00886 185 FFVGADTPPGKPATGKLSF-------KGARW-SVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQF 256 (366)
T ss_pred HHhcccCCcccccchhccc-------ccccc-cccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5555665543211000000 00000 000000114567888898888887777777777888899999999888
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 545 HLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 545 g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|+++.+++.+..+..+.++++.+++|+++||+++|+
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 292 (366)
T TIGR00886 257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR 292 (366)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch
Confidence 999999998888899999999999999999999874
|
|
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-22 Score=215.36 Aligned_cols=240 Identities=12% Similarity=0.003 Sum_probs=187.3
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHH-HHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGT-AIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 395 (744)
..+++|++..+.|++.+++.++..+.+++.|+++||+||||.++. +.++.+++.++ .+.+++++.+++.|++.|.+.
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~ 101 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLL--FAWNRNYFLLLVLGVLLSSFA 101 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHH--HHhcchHHHHHHHHHHHHhhh
Confidence 357899999999999999999999999999999999999987665 44444555555 567788888888999998888
Q ss_pred hhhhhHHhHHhhhccCccchhHH--HHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRL--ATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~--~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
+...|...++..|+.|++.|+.+ .++......+|..++|.+++.+.+.+|||+.|++.+++.++..++.+++.||.|+
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 88888888999999888777754 5778888899999999999999999999999999988877776666665677654
Q ss_pred CCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Q psy15142 474 LHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF 553 (744)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 553 (744)
+.+... ...+.++.++++.++...+..++..........+.|.|+++.+|.++.+.+.
T Consensus 182 ~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 239 (375)
T TIGR00899 182 GAPGAL----------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGL 239 (375)
T ss_pred Cccccc----------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHH
Confidence 321100 0112334566776665555555555555556677888988778999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.....+...++.+++|++.||+++|+
T Consensus 240 ~~~~~~~~~~~~~~~~g~l~~r~g~~~ 266 (375)
T TIGR00899 240 MMGTAAGLEIPFMLLAGYLIKRFGKRR 266 (375)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcchh
Confidence 887777778888999999999999885
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-22 Score=215.12 Aligned_cols=232 Identities=12% Similarity=0.069 Sum_probs=186.3
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK-----LNPGSVIIVRICQGL 393 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~ 393 (744)
.++|+|.++.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++..++ .+++ ++++.+++.|++.|+
T Consensus 63 ~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~--~~~a~~~~~~s~~~lli~r~l~Gi 140 (462)
T PRK15034 63 IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVW--LGIAVQNPNTPFGIFIVIALLCGF 140 (462)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HHHHHcccCCCHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999888887 4444 789999999999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh-----h-------------ccCchhHHHHHHH
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT-----E-------------HFSWEAMFYFYGC 455 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~-----~-------------~~gw~~~f~~~~~ 455 (744)
+ +..++.....+++++|+++||+++|+....+++|..+++++.+.+. . ..+|+..+++.++
T Consensus 141 g-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~ 219 (462)
T PRK15034 141 A-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVP 219 (462)
T ss_pred H-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHH
Confidence 8 7788999999999999999999999998777778777766665433 2 2347777778888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 456 MGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLF 535 (744)
Q Consensus 456 ~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (744)
+.++..++.+++.++.+..+. ........+|+|..|.+++.+++.+.++.++.++
T Consensus 220 ~~iv~~i~~~~~~~~~~~~~~-------------------------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~ 274 (462)
T PRK15034 220 LLAIATIAAWSGMNDIASSRA-------------------------SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAG 274 (462)
T ss_pred HHHHHHHHHHHhCCCcccccc-------------------------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 777776666666444321100 0123567899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 536 QASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 536 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+|.|+++.+ +.........+..+...++++++|+++||+|+++
T Consensus 275 lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~ 317 (462)
T PRK15034 275 FAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR 317 (462)
T ss_pred HHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH
Confidence 999998744 3333333344456788899999999999999985
|
|
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.1e-22 Score=221.77 Aligned_cols=260 Identities=15% Similarity=0.116 Sum_probs=205.8
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++ +.++++.+.+++.|+++|++.+.
T Consensus 37 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~g~~~~~ 114 (471)
T PRK10504 37 AQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF--CALSGTLNELLLARVLQGVGGAM 114 (471)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHhhhHH
Confidence 4679999999999999999999999999999999999999999998888888877 56778899999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|+++.|+......+|..++|.+++.+.++.|||+.|++.....++..++.....|+.+....+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r 194 (471)
T PRK10504 115 MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRR 194 (471)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999998877776666665555554332222
Q ss_pred CChHHHHHHH-------Hhhcccc-------------------------cccCCCCCCCcHHHHhhcHHHHHHHHHHHHH
Q psy15142 478 ISGRELLYIE-------KSLGSSV-------------------------QVAMPTLATTPWREFAHSMPVYAIIVANFCR 525 (744)
Q Consensus 478 ~~~~~~~~~~-------~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 525 (744)
.+........ ....... +.........+. +++++|.++...+..++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~ 273 (471)
T PRK10504 195 FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAG 273 (471)
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHH
Confidence 2211100000 0000000 000011112233 578999998888888887
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 526 SWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 526 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+......+.|.|++...|.++.++++...+..++..++.++.+++.||+++|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~ 328 (471)
T PRK10504 274 RIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR 328 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 7777777788999998878999999999988888888888999999999999874
|
|
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=218.80 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=201.4
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ..++++.+.+++.|++.|++.+
T Consensus 23 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~ 100 (352)
T PF07690_consen 23 LAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLL--LAFASNFWLLLIARFLLGIGSG 100 (352)
T ss_dssp HHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHH--hhhhhhHHHHhhhccccccccc
Confidence 35788999999999999999999999999999999999999999999999998555 3355777789999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|++++++......+|..++|.+++.+.+.++|++.|++.+++.++..++..++.++++++++
T Consensus 101 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 180 (352)
T PF07690_consen 101 FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRE 180 (352)
T ss_dssp HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT
T ss_pred cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccc
Confidence 99999999999999999999999999999999999999999999988999999999999988887754444455444332
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCC-cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hhhHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATT-PWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQ-IQETGFI 554 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s-~~~~~~~ 554 (744)
..+.++.+. ..+.... .++.+++++.+|...+..++..+.......+.|.|+++.+|++ ..+.+.+
T Consensus 181 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (352)
T PF07690_consen 181 RESPKESES------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLL 248 (352)
T ss_dssp --SSTTTT--------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHH
T ss_pred ccccccccc------------ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHH
Confidence 222111100 0000111 2567777787775566666666778888999999977778999 7899999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 555 GSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 555 ~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+..+.+.++.++.+++.||+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~l~~~~~~~~ 274 (352)
T PF07690_consen 249 FSIFGIVGIIGSLLAGRLSDRFGRRR 274 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999998763
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-22 Score=221.35 Aligned_cols=250 Identities=12% Similarity=0.047 Sum_probs=190.8
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++ .+++++++.++++|++.|++.+.
T Consensus 45 ~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~g~g~ 122 (426)
T PRK12307 45 KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL--SGLASGVIMLTLSRFIVGMGMAG 122 (426)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999999999999999999999999999887 67788999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
.++....++.|++|+++|+++.++...+..+|.++++.+.+.+.+.+|||+.|++.++..++. +......||++++.
T Consensus 123 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~-~~~~~~~p~~~~~~-- 199 (426)
T PRK12307 123 EYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLV-IYIRARAPESKEWE-- 199 (426)
T ss_pred HHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHH-HHHHHHCCCChHHH--
Confidence 999999999999999999999999999999999999999999988899999998754433222 21111223322110
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVA---NFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 554 (744)
+ +.... ..+............++++++++.++..... .+......+.+..++|.|+++ .|+++.+.+.+
T Consensus 200 ----~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 271 (426)
T PRK12307 200 ----E-AKLSG--KGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNL 271 (426)
T ss_pred ----H-hhhhc--cccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 0 00000 0000000000112256778888776543322 222233334567789999987 69999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 555 GSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 555 ~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+...++.++++++.|++.||++||+
T Consensus 272 ~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 272 MTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 88899999999999999999999874
|
|
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-21 Score=215.14 Aligned_cols=239 Identities=13% Similarity=0.011 Sum_probs=199.2
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.++++.+.++.++..+++.+++.++++++|+++||+|||++++.+.++.+++.++ ...+++++.++++|+++|++.+.
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~--~~~a~~~~~l~~~r~l~Gi~~~~ 120 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA--TLFTTSMTQFLIARFIQGTSICF 120 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999988887 67788999999999999999887
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|++++++......+|..+||++++.+.++.|||+.|++.+++.++..++.++..||++++.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~ 200 (413)
T PRK15403 121 IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV 200 (413)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC
Confidence 77777889999999999999999999999999999999999999889999999999888777766555555776432110
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
. . .... ....++.++++|.++...+..++.....+.+..+.|.++++.+|+++.+.++....
T Consensus 201 ~-~-~~~~----------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~ 262 (413)
T PRK15403 201 P-F-SAKS----------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVP 262 (413)
T ss_pred C-C-ChHH----------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHH
Confidence 0 0 0000 01246778899999988888777777888888889999998889999999998888
Q ss_pred HHHHHHHHHHHHHHHhHHh
Q psy15142 558 PHLLMTIVVPCGGMLADHL 576 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~ 576 (744)
...+..++..+.+.+.++.
T Consensus 263 ~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 263 VFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 8888888777777765443
|
|
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-22 Score=213.43 Aligned_cols=245 Identities=9% Similarity=-0.002 Sum_probs=197.1
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-----ChHHHHHHHHHHhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL-----NPGSVIIVRICQGL 393 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~G~ 393 (744)
.+++.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ..... +.+.+++.|++.|+
T Consensus 27 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~g~ 104 (365)
T TIGR00900 27 LAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAV--LPFVALLGGLNIWQVYVLAGILAI 104 (365)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHH--HHHHHHcCCCcHHHHHHHHHHHHH
Confidence 457888999999999999999999999999999999999999998888777766 34444 88899999999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc-ccCC
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS-FEKP 472 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~-~e~p 472 (744)
+.+...+...++++|++|+++|+++.++.+....+|..++|.+++.+.+..||++.|++.++..++..++.+.+. |+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (365)
T TIGR00900 105 AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELA 184 (365)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 999999999999999999999999999999999999999999999999999999999988777666554444332 2222
Q ss_pred CCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChhhH
Q psy15142 473 CLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLV-LFQASYLKSTFHLQIQET 551 (744)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~ 551 (744)
+..+ .+.++ +. .++ ....++.++++|.++...+..+.......... .+.|.|.++.+|.+..+.
T Consensus 185 ~~~~-~~~~~-~~-~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (365)
T TIGR00900 185 ASEI-QALSN-AV-LRD------------TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHY 249 (365)
T ss_pred Cccc-cccch-hH-HHH------------HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHH
Confidence 1111 10000 00 000 01235667888888877777777666666665 788999887789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 552 GFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 552 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.+.....++.+++.++.+++.||.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 278 (365)
T TIGR00900 250 GWVLAAFGLGALLGALLLGLLGRYFKRMA 278 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhH
Confidence 99999999999999999999999998873
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=215.46 Aligned_cols=261 Identities=14% Similarity=0.106 Sum_probs=190.7
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++ ..++++++.+++.|++.|++.+
T Consensus 38 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~G~~~~ 115 (405)
T TIGR00891 38 VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLA--CGFAPGYITMFIARLVIGIGMG 115 (405)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHhhhh
Confidence 35789999999999999999999999999999999999999999999998888877 5678899999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC--chhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS--WEAMFYFYGCMGLLWYLCWLWLSFEKPCL 474 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~e~p~~ 474 (744)
...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+ ||+.|++.++..++..+. ....||++++
T Consensus 116 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~-~~~~~~~~~~ 194 (405)
T TIGR00891 116 GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWL-RKNIPEAEDW 194 (405)
T ss_pred hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH-HHhCCCChhH
Confidence 9999999999999999999999999999999999999999999888766 999998876655544333 3344665432
Q ss_pred CCCCChH-HH-HHHHHhhcccccccC-CCCCCCcHHHHh-hc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Q psy15142 475 HPTISGR-EL-LYIEKSLGSSVQVAM-PTLATTPWREFA-HS-MPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQ 549 (744)
Q Consensus 475 ~~~~~~~-~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 549 (744)
....+.+ +. +..++..+....... .+......+... +. +.+....+..+...........++|.|+.+.+|++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 274 (405)
T TIGR00891 195 KEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPH 274 (405)
T ss_pred HHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHH
Confidence 2111100 00 000000000000000 000000011111 11 1122223333333444556667889999887899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 550 ETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 550 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.+.+.+...++.+++.++.+++.||+++|+
T Consensus 275 ~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 305 (405)
T TIGR00891 275 TVANIVVFSNIGAIVGGCVFGFLGDWLGRRK 305 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchh
Confidence 9999999999999999999999999999885
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=223.18 Aligned_cols=332 Identities=12% Similarity=-0.047 Sum_probs=229.1
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.++..++..++.++.|+++||+ |||+.+.++.++.+++.++++++++++.+++.|++.|
T Consensus 45 ~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 114 (406)
T PRK11551 45 FGLDVAQMGWAFSAGILGLLPGALLGGRLADRI----------GRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTG 114 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44444 349999999999999999999999999 6777888888888888888899999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----hh-----Hhhhhhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----AT-----KEGLEKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~ 271 (744)
++.+...+...+++.|..|+ +||+.+|+.+....+|.++++.+.....+...+....... .. ....++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 115 VGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred hhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999888889999999974 6999999999999999988877553332222221111000 00 00001100
Q ss_pred hh------hHHH-HHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhh
Q psy15142 272 IE------REVA-TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQV 344 (744)
Q Consensus 272 ~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 344 (744)
.. ++.. ...+..+++...+.........+...........+.... .++.|++..+.+++.+.+.++..++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~ 273 (406)
T PRK11551 195 AFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSL-LVGQGLSRSQAGLVQIAFNIGGALGSL 273 (406)
T ss_pred hHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCChhhhhHHHHHHHHHHHHHHH
Confidence 00 0000 111111111111111111111111111111111111111 245688888999999999999999999
Q ss_pred hhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHH
Q psy15142 345 PGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFC 424 (744)
Q Consensus 345 ~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~ 424 (744)
+.|+++||+|||+.+..+.+..+++.++ ....++.+.+.+..++.|++.++..+...++..|.+|++.|+++.|+.+.
T Consensus 274 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 351 (406)
T PRK11551 274 LIGALMDRLRPRRVVLLIYAGILASLAA--LAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVA 351 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH--HHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence 9999999999999988876666666555 34555666666777888888888888899999999999999999999999
Q ss_pred HhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHhh
Q psy15142 425 GTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 425 ~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 467 (744)
...+|..++|.++|.+.++.+ |...++..+.+.++..++.++.
T Consensus 352 ~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 352 VGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988654 5555555555555544444443
|
|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-21 Score=218.75 Aligned_cols=254 Identities=14% Similarity=0.117 Sum_probs=186.5
Q ss_pred cccccccC---chhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhh
Q psy15142 317 KVKHINWT---VAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGL 393 (744)
Q Consensus 317 ~~~~~g~s---~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 393 (744)
..++++++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++ .+++++++.+++.|++.|+
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~r~l~G~ 192 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVL--TAFSPNYTVFLVFRLLVGM 192 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHH--HHHcccHHHHHHHHHHHHh
Confidence 35789998 889999999999999999999999999999999999999999888877 6788999999999999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
+.++..+...+++.|++|+++|+.+.++...+..+|.++++.+++.+.+ ||+.|++.+++.++..+.. ++.||+|+
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp~ 268 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESPR 268 (505)
T ss_pred hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCChH
Confidence 9999999999999999999999999999999999999999988876653 9999999988887776665 55699887
Q ss_pred CCCCCC-hHH-HHHHHHhhcc---c----------ccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 474 LHPTIS-GRE-LLYIEKSLGS---S----------VQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 474 ~~~~~~-~~~-~~~~~~~~~~---~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
+..... .++ .+.+++..+. . .+.......+.++++++++|.++...+..+...+......+.++.
T Consensus 269 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (505)
T TIGR00898 269 WLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVL 348 (505)
T ss_pred HHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 532111 111 1111110000 0 000000112346788999988876655544433333333222333
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
++. ..+.+.. ....+..+..+++.++++++.||+|||+
T Consensus 349 ~~~-~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~ 386 (505)
T TIGR00898 349 DLG-NLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRY 386 (505)
T ss_pred ccc-ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 333 2455533 3334556777888999999999999874
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=222.09 Aligned_cols=331 Identities=11% Similarity=-0.030 Sum_probs=232.2
Q ss_pred hhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.++.+.. .|++.+++.++..++++++|+++||+ |||+++.+++++.+++.+++++++|+++++++|++.
T Consensus 38 ~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 107 (390)
T PRK03545 38 SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV----------ERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGI 107 (390)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----------ChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3444443 39999999999999999999999999 788899999999999999999999999999999999
Q ss_pred HHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh---------hHhhhhhh
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA---------TKEGLEKF 270 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 270 (744)
|++.+...+...+++.|+.|+ +||+++|+++.+.++|.++++.+.....+...+........ .....++.
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999988888888999999985 69999999999999999988765433222111111100000 00001111
Q ss_pred chh-hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHh
Q psy15142 271 NIE-REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFF 349 (744)
Q Consensus 271 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 349 (744)
+.+ +...+..++.++++ ..+..... .+...........+......+.+|.+..+.+++.++..++..+++++.|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 264 (390)
T PRK03545 188 PSEHSGSLKSLPLLFRRP--ALVSLYLL-TVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRL 264 (390)
T ss_pred CCCCcchHHHHHHHHhCc--HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 11111222222221 11211111 111111111111111122245578888899999999999999999999999
Q ss_pred hhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhH
Q psy15142 350 ASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAG 429 (744)
Q Consensus 350 ~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g 429 (744)
+||+|||++.. +..+..++.... ....++.+.+++..++.|++.+...+...+++.+..| +.|++++|+++...++|
T Consensus 265 ~dr~~~~~~~~-~~~~~~~~~~~l-~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 341 (390)
T PRK03545 265 GNRHPSGFLLI-AIALLLVCLLLL-LPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIG 341 (390)
T ss_pred hhccchhHHHH-HHHHHHHHHHHH-HHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHH
Confidence 99999887544 444444433331 2345566777778888899887777777888888876 68899999999999999
Q ss_pred HHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 430 IVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 430 ~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
..+||+++|.+.+++|++..|++.+++.++.++..+...
T Consensus 342 ~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 342 IGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999888877766665553
|
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=214.36 Aligned_cols=232 Identities=14% Similarity=0.111 Sum_probs=170.2
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-Hhhc-----ChHHHHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-AIKL-----NPGSVIIVRICQ 391 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~l~ 391 (744)
.+++|.|..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.... ...+ ++..+++.|+++
T Consensus 43 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 122 (399)
T PRK05122 43 HDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLL 122 (399)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999998887776554211 1122 455788999999
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
|++.+...+...+++.|++|+++|++++++......+|..+++.+++.+.+.+||+..+++.+++.++..+.. ++.
T Consensus 123 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~~ 198 (399)
T PRK05122 123 GIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA----RPR 198 (399)
T ss_pred HhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH----hcC
Confidence 9999999999999999999999999999999999999999999999999999999998877665544332222 111
Q ss_pred CCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Q psy15142 472 PCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQET 551 (744)
Q Consensus 472 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 551 (744)
|+..+. + ++ +.++++.+++ ++......++...++.....+.|.|+.+ .|++ +.
T Consensus 199 ~~~~~~-~-~~--------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 251 (399)
T PRK05122 199 PAVPPV-K-GE--------------------RLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GA 251 (399)
T ss_pred CCCCCC-C-cc--------------------chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cc
Confidence 211110 0 00 0112232321 2222222333344555666778888875 4653 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 552 GFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 552 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+...+...++.+++.++.|++.||+++|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 280 (399)
T PRK05122 252 ALALTLFGVAFVGARLLFGNLINRLGGLR 280 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 56667778888999999999999998874
|
|
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-22 Score=221.21 Aligned_cols=255 Identities=14% Similarity=0.101 Sum_probs=179.9
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh------------cChHHHHH
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK------------LNPGSVII 386 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 386 (744)
.+++++..+.+++.+++.++..++++++|+++||+|||++++++.++++++.+. .+++ ..+..+++
T Consensus 48 ~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 125 (479)
T PRK10077 48 LSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALG--SAWPEFGFTSIGPDNTGYVPEFVI 125 (479)
T ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhhccccccccccchhHHHHHHH
Confidence 345888899999999999999999999999999999999999999988887766 3321 12456789
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh--------hccCchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT--------EHFSWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~--------~~~gw~~~f~~~~~~~~ 458 (744)
.|+++|++.|+..+...++++|++|+++|++++++.+.+..+|..+++.+++.+. +.+|||+.|++.+++.+
T Consensus 126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 126 YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPAL 205 (479)
T ss_pred HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888776543 35699999999888777
Q ss_pred HHHHHHHhhcccCCCCCCCC-ChHHHHHHHHhhcccccccCCCCCCCcHHHHhh-----cHH---------HHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTI-SGRELLYIEKSLGSSVQVAMPTLATTPWREFAH-----SMP---------VYAIIVANF 523 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~---------~~~~~~~~~ 523 (744)
+..+. .++.||+|++.... +.++.....+.......... .....++.++ .+. ++.+....+
T Consensus 206 ~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
T PRK10077 206 LFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQ---ALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVF 281 (479)
T ss_pred HHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHH---HHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHH
Confidence 76554 44568887542111 11221111111110000000 0000001110 000 111122223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 524 CRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 524 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+..+++...++.|.++++ .|++.........+.++..+++.+++++++||++||+
T Consensus 282 ~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 337 (479)
T PRK10077 282 QQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP 337 (479)
T ss_pred HHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 3334455566777888775 6888777777777888899999999999999999884
|
|
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=213.54 Aligned_cols=260 Identities=19% Similarity=0.193 Sum_probs=197.5
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ....++++.+++.+++.|++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~ 120 (398)
T TIGR00895 43 ISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLL--CALATNVTQLLILRFLAGLGLG 120 (398)
T ss_pred HhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHH--HHHccchHHHHHHHHHHhcccc
Confidence 35778999999999999999999999999999999999999999999888888877 5677888999999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||+..|++.+++.++..++.+++.||+++...
T Consensus 121 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T TIGR00895 121 GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLV 200 (398)
T ss_pred cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999876666666666666677654322
Q ss_pred CCChHHHHHHHH----hhcccccc--cCC----CCCCCcHHHHhhc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15142 477 TISGRELLYIEK----SLGSSVQV--AMP----TLATTPWREFAHS---MPVYAIIVANFCRSWNFYLLVLFQASYLKST 543 (744)
Q Consensus 477 ~~~~~~~~~~~~----~~~~~~~~--~~~----~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 543 (744)
..+.++.....+ ....+... .+. +..+..++.++++ +..+.+.+..++.....+....+.|.+.+ .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 279 (398)
T TIGR00895 201 SKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV-E 279 (398)
T ss_pred hcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 112221111111 10000000 000 0011112223322 33444455555666677777888885554 5
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 544 FHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 544 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
.|+++.+.+.+.+...++.+++.++.++++||+++|
T Consensus 280 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 280 LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 799999999999999999999999999999999976
|
|
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-21 Score=210.97 Aligned_cols=243 Identities=12% Similarity=0.037 Sum_probs=186.9
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-H--hhcChHHHHHHHHHHhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-A--IKLNPGSVIIVRICQGLV 394 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~G~~ 394 (744)
.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+.+.. . ..++++.+++.|++.|++
T Consensus 44 ~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 123 (417)
T PRK10489 44 IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFF 123 (417)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 3566778889999999999999999999999999999999999888777766554211 1 245677888899999999
Q ss_pred hhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15142 395 EGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCL 474 (744)
Q Consensus 395 ~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~ 474 (744)
.+...+...+++.|++|+++|+++.++.+....+|..+||.+++.+.+..+|++.|++.++..++..++.+. .|+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~ 202 (417)
T PRK10489 124 GSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPALPPP 202 (417)
T ss_pred HHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCCCCC
Confidence 888888889999999999999999999999999999999999999998889999998887776665554443 3554332
Q ss_pred CCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q psy15142 475 HPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554 (744)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 554 (744)
.+... +..+. ....++.++++|.++...+..++.. ...++..+.|.|+++.+|+++.+.+++
T Consensus 203 ~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~ 264 (417)
T PRK10489 203 PQPRE-HPLRS----------------LLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLL 264 (417)
T ss_pred Ccccc-cchHH----------------HHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHH
Confidence 11000 00000 0113455677777665554444332 235667788999998789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 555 GSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 555 ~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
.+...++.+++.++.+++.||.+++
T Consensus 265 ~~~~~~g~~ig~~~~~~l~~~~~~~ 289 (417)
T PRK10489 265 YAAVPLGAALGALTSGWLAHSARPG 289 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCcc
Confidence 9999999999999999999986544
|
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-23 Score=223.20 Aligned_cols=321 Identities=10% Similarity=-0.044 Sum_probs=225.7
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .|++.+++.++..++++++|+++||+ |||+.+.++.++.+++.++++++++.+.++++|++.|
T Consensus 33 ~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~----------G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 33 FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF----------GPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc----------CccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444443 49999999999999999999999999 7777888899999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHH-hhhccCCcccchhhHHHhHhh----h-----Hhhhhhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFIS-YIGRRGKSTMDADMQQKAIDA----T-----KEGLEKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~ 271 (744)
++.+...+.....+.|+.|++||++.++.+.+.++|.+++ ++...... ...+........ . ....+..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 103 AGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVIN-LEGVPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 9999877777777788888889999999999999887654 33322211 111111100000 0 00000000
Q ss_pred hh--------hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhh
Q psy15142 272 IE--------REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQ 343 (744)
Q Consensus 272 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 343 (744)
.+ .+.....++.++ .+..|................. .+... ..++++.+..+.+++.+++.++..+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (377)
T TIGR00890 182 GQLIKTNIEVSVKDYTVWEMLR--TPQFWVLYLSFFLNAVSGLLLI-GLYKP-YGQSLGLSDGFLVLAVSISSIFNGGGR 257 (377)
T ss_pred hhccccCcccchhhhhHHHHHc--CccHHHHHHHHHHHhHHHHHHH-HHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 000011112221 1222222222111111111111 11111 135678888888999999999999999
Q ss_pred hhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC--hHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHH
Q psy15142 344 VPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN--PGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATI 421 (744)
Q Consensus 344 ~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~ 421 (744)
++.|+++||+|||+.+..+.++.+++.++ ....++ ...++...++.|++.+...+....++.|.+|+++|+++.|+
T Consensus 258 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 335 (377)
T TIGR00890 258 PFLGALSDKIGRQKTMSIVFGISAVGMAA--MLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGF 335 (377)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHH--HHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHH
Confidence 99999999999999999888888877766 333332 23344556778888887777888899999999999999999
Q ss_pred HHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHH
Q psy15142 422 AFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLW 460 (744)
Q Consensus 422 ~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~ 460 (744)
.+....+|..++|.+.|.+.++.||+..|.+.+++.++.
T Consensus 336 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 336 LYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999999999999999999999999999998887776654
|
|
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-22 Score=219.15 Aligned_cols=345 Identities=10% Similarity=-0.078 Sum_probs=234.4
Q ss_pred eccccchhhhhhcccc---cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC
Q psy15142 112 FGMKCNLGFAKLQFEG---RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 188 (744)
Q Consensus 112 ~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~ 188 (744)
+.+...++....+++. +.|++.+++.++..+++++.|+++||+ |||+++..++.+.+++.+++++++
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~----------G~r~~l~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV----------SERRSVAISLLLIAVGALMRELYP 95 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHCc
Confidence 4444555544444443 349999999999999999999999999 788899999999999999999999
Q ss_pred ChhHHHHHHHHHHHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCccc-chhhHHHhH---hhhH
Q psy15142 189 SEVTATMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTM-DADMQQKAI---DATK 264 (744)
Q Consensus 189 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~---~~~~ 264 (744)
+++.+++.|++.|++.+...+....++.+..|++|++++|++..+.++|..+++.+.....+. ..+...... ....
T Consensus 96 ~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 96 QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999999999999999999888888888998888899999999888777777765533221111 112111000 0000
Q ss_pred h----h-h-hhhch-hhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHH
Q psy15142 265 E----G-L-EKFNI-EREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFW 337 (744)
Q Consensus 265 ~----~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 337 (744)
. . . ++... +++......+.+ +.++.|...+...+. ...+.....+...+. .++|.+..+.+.+.+++.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~~~~~~~-~~~~~~~~~~lp~~l-~~~g~s~~~ag~~~~~~~i 251 (393)
T PRK09705 176 ALFAWWWQSAREVASSHKTTTTPVRVV--FTPRAWTLGVYFGLI-NGGYASLIAWLPAFY-IEIGASAQYSGSLLALMTL 251 (393)
T ss_pred HHHHHHHHhcCCCccccCCCcCCcccc--cCHhHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHcCCChhhhhHHHHHHHH
Confidence 0 0 0 00000 000000000010 111122222212111 111112111112222 3478999999999999999
Q ss_pred HHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccC-ccchh
Q psy15142 338 GYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAP-PLERS 416 (744)
Q Consensus 338 ~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p-~~~Rg 416 (744)
+..++.++.|++.||+|||+.+..+..+.+++.++.. ....+...+ ..++.|++.+...+.......+.++ +++|+
T Consensus 252 ~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g 328 (393)
T PRK09705 252 GQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFI-WLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAG 328 (393)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH-HccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHH
Confidence 9999999999999999999999888777766665421 122222222 2345688888888877777777775 57899
Q ss_pred HHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 417 RLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 417 ~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
+..|+.+....++..++|.+.|++.+..| |...|.+.++.+++..++...+.||++.
T Consensus 329 ~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 329 KLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999876 7777888777777766666667676643
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=208.77 Aligned_cols=333 Identities=14% Similarity=0.044 Sum_probs=247.5
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
..++.+... |++.+++.++..+++++...++||+ -||++++..+.++.++.+++++++|++.+++.|++
T Consensus 41 ~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~----------~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~ 110 (394)
T COG2814 41 ADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL----------ERRRLLLGLLALFIVSNLLSALAPSFAVLLLARAL 110 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc----------chHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 334444433 9999999999999999999999999 67889999999999999999999999999999999
Q ss_pred HHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhh--------Hhhhhhh
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDAT--------KEGLEKF 270 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 270 (744)
.++..|..++...++.++++|+ +|++++|+...+..++.++|.-+.....+.-. |+..+... .-.....
T Consensus 111 ~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G--WR~~F~~ia~l~ll~~~~~~~~l 188 (394)
T COG2814 111 AGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG--WRATFLAIAVLALLALLLLWKLL 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999985 79999999999999988888333322222222 22111110 0000111
Q ss_pred c--h-hhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhH
Q psy15142 271 N--I-EREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGG 347 (744)
Q Consensus 271 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 347 (744)
+ . .+......++.++.-.++.....+...+..+...+..|.|..+...+..|++.+..+++..+|.++..+|.+++|
T Consensus 189 P~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gG 268 (394)
T COG2814 189 PPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGG 268 (394)
T ss_pred CCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHh
Confidence 1 0 111111222222222222333344444445555555666666666778899999999999999999999999999
Q ss_pred HhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhh
Q psy15142 348 FFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTY 427 (744)
Q Consensus 348 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~ 427 (744)
+++|| +.|+.+.....+.++..+.+ .....+.+..++..++.|+.............++ .-++.+..+.+++....+
T Consensus 269 rl~dr-~~~~~l~~~~~l~a~~~l~l-~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~n 345 (394)
T COG2814 269 RLADR-GPRRALIAALLLLALALLAL-TFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFN 345 (394)
T ss_pred hhccc-cchhHHHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHH
Confidence 99999 99998888877777766663 2344556666666667777766665556666666 346899999999999999
Q ss_pred hHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 428 AGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 428 ~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
+|..+|..++|.+.+++|+....++.+++.++..++.++..
T Consensus 346 lgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 346 LGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877765553
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-21 Score=210.23 Aligned_cols=228 Identities=16% Similarity=0.187 Sum_probs=170.0
Q ss_pred HHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChH--------HHHHHHHHHhhhhhhhhhHHhHH
Q psy15142 334 SFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPG--------SVIIVRICQGLVEGVCYPAVHGI 405 (744)
Q Consensus 334 ~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~ 405 (744)
+..++..+++++.|+++||+|||+++..+.++++++.++ .++++++. .++++|+++|++.++.++....+
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~ 149 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATAL--IGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALL 149 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHH
Confidence 445667788899999999999999999999999999888 67788866 58889999999999999999999
Q ss_pred hhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh--------hccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 406 WRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT--------EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 406 ~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
++|++|+++|++..+..+.+..+|..+++.+...+. ..+|||..|++.+++.++.. ......||+|++..
T Consensus 150 ~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~~~~- 227 (438)
T PRK09952 150 AVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAEFEQ- 227 (438)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChhHHH-
Confidence 999999999999999999999999988887776654 25799999998877654432 22223355543210
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCc-HHHHhhcHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTP-WREFAHSMPVYAIIV-ANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
+. .+.+ + . + .+.+ .+.++++++.+...+ ..++.....+....|.|.|+++.+|++......+.
T Consensus 228 ----~~----~~~~-~----~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~ 292 (438)
T PRK09952 228 ----QQ----HEQA-A----A-K-KRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIG 292 (438)
T ss_pred ----HH----hhcc-c----c-c-ccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 00 0000 0 0 0 0112 234667776665543 45556677788888999999887888877655555
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
....+...++.++.|+++||++||+
T Consensus 293 ~~~g~~~~i~~~~~g~l~Dr~grr~ 317 (438)
T PRK09952 293 LLVGGLSCLTIPCFAWLADRFGRRR 317 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchH
Confidence 5667778888999999999999885
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-22 Score=217.38 Aligned_cols=323 Identities=11% Similarity=-0.036 Sum_probs=224.2
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
+|.+. +.|++.+++.++..+++++.|+++||+ |||+.+.++.++.+++.++++++++.+.++++|++.|
T Consensus 36 ~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~----------g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (381)
T PRK03633 36 EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI----------GFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAG 105 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45554 349999999999999999999999999 7777888899999999999999999999999999999
Q ss_pred HhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccc-h-hhHHHhHhh--hH-hhh---hhhch
Q psy15142 202 AFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMD-A-DMQQKAIDA--TK-EGL---EKFNI 272 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~--~~-~~~---~~~~~ 272 (744)
++.+...+...+.+.+..| ++||+.+|+++.+.++|..+++.+........ . ..+...... .. -.. ++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (381)
T PRK03633 106 IGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQA 185 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 9999877766655666665 57999999999999999998877554332211 1 111111000 00 000 00000
Q ss_pred hhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc
Q psy15142 273 EREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR 352 (744)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr 352 (744)
+++......+.++++ ..+...... +.........+.+...+ .++.|.+..+.+++.++..++..+++++.|++.||
T Consensus 186 ~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~lp~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 261 (381)
T PRK03633 186 ENHDSTSIWPMLKLR--QARLGVNGC-IISGIVLGSLYGLMPLY-LNHQGMSDASIGFWMALLVSAGILGQWPIGRLADR 261 (381)
T ss_pred CCCCCCCHHHHHHhc--chHHHHHHH-HHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 000001111222211 112111111 11111111111111122 23468888888999999999999999999999999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHh
Q psy15142 353 YPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVL 432 (744)
Q Consensus 353 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~i 432 (744)
+|+|+++..+.++.+++.+.. . +........++.|++.+...|...+++.|..|+++++...+..+...++|..+
T Consensus 262 ~~~~~~l~~~~~~~~~~~~~~--~---~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i 336 (381)
T PRK03633 262 FGRLLVLRVQVFVVILGSIAM--L---SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLL 336 (381)
T ss_pred cCcHHHHHHHHHHHHHHHHHH--h---hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877777665542 1 12233456677788777788999999999999888888888888889999999
Q ss_pred hHHHHHHhhhccCchhHHHHHHHHHHHHHHHH
Q psy15142 433 GLPISAILTEHFSWEAMFYFYGCMGLLWYLCW 464 (744)
Q Consensus 433 g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 464 (744)
||.++|.+.+++||++.|.+.+.+.++..+..
T Consensus 337 gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 337 GPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887776554443
|
|
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-21 Score=216.62 Aligned_cols=260 Identities=14% Similarity=0.073 Sum_probs=182.2
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ .+++++++.+++.|++.|++.++
T Consensus 47 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~G~~~~~ 124 (496)
T PRK03893 47 QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLA--CGFAPGYWTLFIARLVIGMGMAG 124 (496)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998888877 56778999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
.++....++.|++|+++|+++.++...+..+|..+++.+.+.+.+.++||+.|++.++..++. ++.....||++++.+.
T Consensus 125 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~-~~~~~~~p~~~~~~~~ 203 (496)
T PRK03893 125 EYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFA-LWLRKNLPEAEDWKEK 203 (496)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHHHHhCCCchhhhhh
Confidence 999999999999999999999999999999999999999999999999999998754443333 2222233544321110
Q ss_pred C-ChHHHHHHHHhhcccccccCCCCCC----CcHHHHh-------------------------------hcHHHHHHHHH
Q psy15142 478 I-SGRELLYIEKSLGSSVQVAMPTLAT----TPWREFA-------------------------------HSMPVYAIIVA 521 (744)
Q Consensus 478 ~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~-------------------------------~~~~~~~~~~~ 521 (744)
. +.++.....+............... ......+ +.+....+.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (496)
T PRK03893 204 HAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVV 283 (496)
T ss_pred ccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 0 0000000000000000000000000 0000000 00000011111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 522 NFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 522 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+......+....++|.|+++.+|++..+++.+.++..++.+++.+++|+++||+++|+
T Consensus 284 ~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 342 (496)
T PRK03893 284 VLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRK 342 (496)
T ss_pred HHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 11111111234578999998778999999999999999999999999999999999884
|
|
| >KOG1330|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-23 Score=212.34 Aligned_cols=250 Identities=16% Similarity=0.150 Sum_probs=203.5
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
++.+|++++..|++.+.+.+.+.++++++|+++||+.||+++.+|..++.++.+. .+++..+|+++++|.+.|+|.+.
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~--~~fs~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA--SGFSNHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccchhh
Confidence 5678999999999999999999999999999999999999999999999999988 77889999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
..|+.+++++|.+|..+|++.+++++.+..+|..+|.+++..+....+ ||+.|+..+++.+++.++.+++++|.++..+
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccc
Confidence 999999999999999999999999999999999999999998887766 9999999999999999999888777654321
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCChhhHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKST---FHLQIQETGF 553 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~g~s~~~~~~ 553 (744)
...+.+ ............+.+.+.+++.+....+++....+...++..|.|.++... .|++..+..+
T Consensus 218 ~~~~~~----------~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~i 287 (493)
T KOG1330|consen 218 DEVDGE----------NKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLI 287 (493)
T ss_pred cccccC----------CcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchh
Confidence 100000 000001111123344455667776666777776777777777777776542 4566677777
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
+..+..+++.+|.+++|.++||+.++
T Consensus 288 fg~vt~~~G~lGvl~Ggiisd~~~~~ 313 (493)
T KOG1330|consen 288 FGGVTCAGGSLGVLFGGIISDKLSRI 313 (493)
T ss_pred hhhHHHhhchhhheehHHHHHHHHHh
Confidence 88889999999999999999997653
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-21 Score=209.14 Aligned_cols=234 Identities=16% Similarity=0.047 Sum_probs=182.5
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.|..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ .+.+++++.+++.|++.|++.+.
T Consensus 33 ~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~G~~~~~ 110 (381)
T PRK03633 33 LAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG--LGLMVGFWSWLAWRFVAGIGCAM 110 (381)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999988877 56788999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+.+.+..++++|++++++...+..+|..+||.+++.+.+...|...+. .+...... +...+. +.+++..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~- 186 (381)
T PRK03633 111 IWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAI-LPLLFT-RILNQQAE- 186 (381)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHH-HHHHHh-cccCCCCC-
Confidence 888888888899999999999999999999999999999998876543333332 22222211 111121 21111100
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
+ . +..+.++.+++|.++......+...........++|.|+++ .|.++...+.+.+.
T Consensus 187 ----~---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~ 243 (381)
T PRK03633 187 ----N---------------H---DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMAL 243 (381)
T ss_pred ----C---------------C---CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHH
Confidence 0 0 01235667888877765544555555566667789999987 69999999998888
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+..++++++.|++.||+++|+
T Consensus 244 ~~~~~~~~~~~~g~l~dr~~~~~ 266 (381)
T PRK03633 244 LVSAGILGQWPIGRLADRFGRLL 266 (381)
T ss_pred HHHHHHHHHhhhHHHHHHcCcHH
Confidence 88999999999999999999885
|
|
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-21 Score=208.10 Aligned_cols=243 Identities=14% Similarity=0.108 Sum_probs=184.4
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
..+++.++.+.+++.+++.+++.++++++|+++||+|||++++++.++.+++.++ +....+. ++.|+++|++.+.
T Consensus 30 ~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~--~~~~~~~---~~~r~l~G~~~a~ 104 (393)
T PRK11195 30 LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL--MLFGIHP---LLAYGLVGIGAAA 104 (393)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH--HHHHHHH---HHHHHHHHHHHHH
Confidence 3677888889999999999999999999999999999999999999988887766 3343332 6789999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..|...+++.|++|+++|++++|+......+|..+||.++|.+.+. .|+..+.+.+...++..+ ..+..||++.+.+.
T Consensus 105 ~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~-~~~~l~~~~~~~~~ 182 (393)
T PRK11195 105 YSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL-FNLFIPRLGARRPG 182 (393)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHhcCCCCcccccc
Confidence 9999999999999999999999999999999999999999999885 477776666554443333 33445665533221
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
.+.+.....+ .. ...++.++++|.+.......++.........+..|.|+++.+|+++.+.|++.++
T Consensus 183 ~~~~~~~~~~-~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~ 249 (393)
T PRK11195 183 QSWNPIALLR-DF------------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAV 249 (393)
T ss_pred cCCCHHHHHH-HH------------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHH
Confidence 1111110010 00 0123566777776554444444445555666677888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++.+++.++.+++.||.++++
T Consensus 250 ~~~g~i~g~~~~~~l~~~~~~~~ 272 (393)
T PRK11195 250 VAIGIAVGAGAAARLVTLETVLR 272 (393)
T ss_pred HHHHHHHHHHHHHHHhcCCcccc
Confidence 99999999999999999877664
|
|
| >KOG0569|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-21 Score=206.30 Aligned_cols=251 Identities=18% Similarity=0.152 Sum_probs=195.3
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-HhhcChHHHHHHHHHHhhhhhhhhhHHhHHh
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-AIKLNPGSVIIVRICQGLVEGVCYPAVHGIW 406 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 406 (744)
.+.+.+++.+|.++|++..++++||+|||..+.++.++..++.++... ...+++.+++++|++.|+..+........|+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 466788999999999999999999999999999888877777666322 2346788999999999999999999999999
Q ss_pred hhccCccchhHHHHHHHHHhhhHHHhhHHHHH-Hhh-hccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC--CChHH
Q psy15142 407 RFWAPPLERSRLATIAFCGTYAGIVLGLPISA-ILT-EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT--ISGRE 482 (744)
Q Consensus 407 ~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~-~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~--~~~~~ 482 (744)
.|..|.+.||....+...+..+|..++..++. .+. +.-.|++.+.+..+++++..++..++ ||+|++.-. .+++|
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~-PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFL-PESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcC-CCCcchHHHHcCCHHH
Confidence 99999999999999999999999999976653 333 34469999999988888877776655 999987422 22233
Q ss_pred HHHHHHhhc-cc-------------ccccCCCCCCCcHHHHhhcHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15142 483 LLYIEKSLG-SS-------------VQVAMPTLATTPWREFAHSMPV-----YAIIVANFCRSWNFYLLVLFQASYLKST 543 (744)
Q Consensus 483 ~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 543 (744)
..+..+... .+ ...+..+.+..+++++++++.. ..+++...++..+.+++.+|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 222111111 11 0011111245678899887533 445566666777888999999999987
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 544 FHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 544 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.|++..++.+.....++...+.++++.++.||+|||+
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRp 336 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRP 336 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 6999999999999999999999999999999999985
|
|
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=218.17 Aligned_cols=256 Identities=13% Similarity=0.142 Sum_probs=183.0
Q ss_pred cCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-HhhcChHHHHHHHHHHhhhhhhhhhH
Q psy15142 323 WTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-AIKLNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 323 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
.+..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.++... ....+++.+++.|++.|++.+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 44889999999999999999999999999999999999999998888877311 12234558899999999999999999
Q ss_pred HhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHH---HHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15142 402 VHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPIS---AILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTI 478 (744)
Q Consensus 402 ~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~---~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~ 478 (744)
..++++|++|+++|++++++.+.+..+|..+++.++ +.+.+..+||+.|++.++..++..+. .++.||+|+.....
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~-~~~l~~~~~~~~~~ 226 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLG-LFFLPESPRWLVGK 226 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHH-HhcCCCChHHHHHc
Confidence 999999999999999999999999999999999998 66667789999999966665555444 44457776421111
Q ss_pred -ChHH-HHHHHHhhcccccc---------------cCCCCCCCcHHHHhh------cHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 479 -SGRE-LLYIEKSLGSSVQV---------------AMPTLATTPWREFAH------SMPVYAIIVANFCRSWNFYLLVLF 535 (744)
Q Consensus 479 -~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~ 535 (744)
..++ .+...+........ .........+.++++ .+.++..++..+........+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (481)
T TIGR00879 227 GRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYY 306 (481)
T ss_pred CChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHH
Confidence 1111 11111000000000 000000111333333 233344444444444445566777
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 536 QASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 536 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.|.++++ .|++..+.+....+..++.+++.+++|+++||+++|+
T Consensus 307 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 350 (481)
T TIGR00879 307 SPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP 350 (481)
T ss_pred HHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 7877765 7999888888888999999999999999999999885
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-20 Score=205.93 Aligned_cols=237 Identities=14% Similarity=0.084 Sum_probs=196.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++ ...+++++.+++.|++.|++.+.
T Consensus 33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~G~~~~~ 110 (401)
T PRK11043 33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG--MLWVESAAQLLVLRFVQAVGVCS 110 (401)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHhhhHH
Confidence 5788999999999999999999999999999999999999999999888888877 56778999999999999999888
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|++++++..+.......+|..++|.+++.+.+++||++.|++.+++.++..++.+++ ++++++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 188 (401)
T PRK11043 111 AAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KPSKKARK- 188 (401)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CCCCCccc-
Confidence 8888889999999999999999999888999999999999999999999999998888877766655544 43322111
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
.++ .+.+++++++++.++...+...+....++.+..+.|.++++ .|+++.+.++....
T Consensus 189 --~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~ 246 (401)
T PRK11043 189 --QSQ-------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVP 246 (401)
T ss_pred --cch-------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHH
Confidence 000 11246677888887766555555566667777888998876 79999999988888
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++..++.++.+++.||+++|+
T Consensus 247 ~~~~~~~g~~~~~~l~~r~~~~~ 269 (401)
T PRK11043 247 QTIAFLVGGYGCRAALQKWGGEQ 269 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH
Confidence 88888999999999999998774
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-20 Score=206.44 Aligned_cols=233 Identities=14% Similarity=0.114 Sum_probs=167.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HH-----hhcChHHHHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TA-----IKLNPGSVIIVRICQ 391 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~l~ 391 (744)
.+++|+|..+.|++.+++.++..++++++|+++||+|||++++.+.++.+++.+... .. ...+++.+++.|+++
T Consensus 43 ~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 122 (392)
T PRK12382 43 HHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLIL 122 (392)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999998877666543210 11 134677889999999
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+++.+.+.+||+..+.+..+..++..+.. ...||.
T Consensus 123 G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 201 (392)
T PRK12382 123 GFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFN-GTVRKV 201 (392)
T ss_pred HHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH-HhccCC
Confidence 9999988888899999999999999999999999999999999999999998999987765544433222211 111221
Q ss_pred CCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Q psy15142 472 PCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQET 551 (744)
Q Consensus 472 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 551 (744)
+.+.+ + +.+.++.++ .++...+..++...+...+..+.|.|+++ .|++. .
T Consensus 202 ~~~~~-----~--------------------~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~ 251 (392)
T PRK12382 202 PAHAG-----E--------------------RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWAM--A 251 (392)
T ss_pred CCCcc-----c--------------------CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCch--h
Confidence 11000 0 001122221 11111122233344555666778888876 46643 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhcCc
Q psy15142 552 GFIGSLPHLLMTIVVPCGGMLADHLRKKGI 581 (744)
Q Consensus 552 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~ 581 (744)
+.......++.+++.++.|++.||+++|+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 281 (392)
T PRK12382 252 GFTLTAFGGAFVLMRVLFGWMPDRFGGVKV 281 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 555666777788999999999999998863
|
|
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=219.02 Aligned_cols=335 Identities=13% Similarity=0.011 Sum_probs=221.4
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC---ChhHHHHHHHHHHHhh
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK---SEVTATMALCLGVAFS 204 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 204 (744)
+.|++.++++++..++++++|+++||+ |||++++++.++.+++.+++.+.. +.+.+++.|++.|++.
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~g~l~d~~----------grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 72 LWGLVVSIFLVGGFIGALFAGWLSDRF----------GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGV 141 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhhhh----------hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhh
Confidence 349999999999999999999999999 777788888888888888885543 3457888999999999
Q ss_pred hcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhc---cCCcccchhhHHHhHh---h-----hHhhh-hh--
Q psy15142 205 GFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGR---RGKSTMDADMQQKAID---A-----TKEGL-EK-- 269 (744)
Q Consensus 205 g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~---~-----~~~~~-~~-- 269 (744)
+...+...++++|+.|+ +||+.+|+.+.+.++|.++++.+. ........+....... . ..... +.
T Consensus 142 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~ 221 (481)
T TIGR00879 142 GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPR 221 (481)
T ss_pred hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChH
Confidence 99999999999999975 699999999999999999998866 2221111111000000 0 00000 00
Q ss_pred -----hchhh----------------HHHH---H---------------HHHhhhhcCCCcceehhhhh--hcccccchh
Q psy15142 270 -----FNIER----------------EVAT---Y---------------IKQYFENAYGPYWQCVVGRN--FGSYVSFET 308 (744)
Q Consensus 270 -----~~~~~----------------~~~~---~---------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 308 (744)
...++ .... . ..+.++......+....... +........
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (481)
T TIGR00879 222 WLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGIN 301 (481)
T ss_pred HHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCe
Confidence 00000 0000 0 00001000000011111111 111111111
Q ss_pred hheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH-h--hc------
Q psy15142 309 HYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA-I--KL------ 379 (744)
Q Consensus 309 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-~--~~------ 379 (744)
...++.....+++|++..+.++......++..++.+++|+++||+|||+.+..+.++.+++.+++... . ..
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSS 381 (481)
T ss_pred ehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Confidence 11111122235678888788888888999999999999999999999999998888777776653210 1 11
Q ss_pred ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHH
Q psy15142 380 NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLL 459 (744)
Q Consensus 380 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~ 459 (744)
+...+....++.+....+..+....++.|.+|++.|+++.++.+...++|.+++|.+.+.+.++.+|++.|++.++++++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVL 461 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHH
Confidence 22222223333333333345667788899999999999999999999999999999999999988999999998888888
Q ss_pred HHHHHHhhcccCC
Q psy15142 460 WYLCWLWLSFEKP 472 (744)
Q Consensus 460 ~~~~~~~~~~e~p 472 (744)
..++.+++.||++
T Consensus 462 ~~i~~~~~~~~~~ 474 (481)
T TIGR00879 462 GLIFVYFFLPETK 474 (481)
T ss_pred HHHHHheecccCC
Confidence 7777666656653
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-22 Score=218.20 Aligned_cols=326 Identities=11% Similarity=-0.023 Sum_probs=211.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChh--------HHHHHHHHHHHhhh
Q psy15142 134 SLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV--------TATMALCLGVAFSG 205 (744)
Q Consensus 134 ~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g 205 (744)
++.++++.+|+++.|+++||+ |||+++++++++.+++.++++++++.. .++++|++.|++.|
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~----------Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g 140 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRL----------GRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVG 140 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhh----------ccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 467788999999999999999 788899999999999999999999976 47778999999999
Q ss_pred cccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCc-cc-----chhhHHHhHhh----------hHhhh-
Q psy15142 206 FAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKS-TM-----DADMQQKAIDA----------TKEGL- 267 (744)
Q Consensus 206 ~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~-~~-----~~~~~~~~~~~----------~~~~~- 267 (744)
...+....+++|+.|+ +||+..+..+.+..+|.+++..+..... .. ....|+..... .....
T Consensus 141 ~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~ 220 (438)
T PRK09952 141 GEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGME 220 (438)
T ss_pred ccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999889999999985 6999999999999998887743221110 00 01112111100 00000
Q ss_pred hhhchhhHH-H-------HHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHH
Q psy15142 268 EKFNIEREV-A-------TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGY 339 (744)
Q Consensus 268 ~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 339 (744)
++....+.. + .+..+.. .++++.|...+...+......+....+...+..+.+|.+......+..+..+..
T Consensus 221 es~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~ 299 (438)
T PRK09952 221 ESAEFEQQQHEQAAAKKRIPVIEAL-LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLS 299 (438)
T ss_pred CChhHHHHHhhcccccccCCHHHHH-HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 000000000 0 0001111 112223333222222222222221112222224557777765555555666667
Q ss_pred HHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh-hc-ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhH
Q psy15142 340 LITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI-KL-NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSR 417 (744)
Q Consensus 340 ~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~ 417 (744)
.++.++.|+++||+|||+++..+.++.+++.+...... .. +...+++..++.+++.+...+..+++++|.+|++.|++
T Consensus 300 ~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~t 379 (438)
T PRK09952 300 CLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYS 379 (438)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHH
Confidence 78888999999999999998887766555443311111 22 23344445566678878778888999999999999999
Q ss_pred HHHHHHHH-hhhHHHhhHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 418 LATIAFCG-TYAGIVLGLPISAILTEHF--SWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 418 ~~g~~~~~-~~~g~~ig~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
+.|+.+.. ..+|+.++|.+.+++.+.. +|...+.+.+++.++..+..+.. +|+
T Consensus 380 g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~-~~~ 435 (438)
T PRK09952 380 GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM-KDN 435 (438)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc-ccc
Confidence 99986644 5589999999999998743 48888877777776666655443 543
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-21 Score=209.34 Aligned_cols=241 Identities=8% Similarity=0.002 Sum_probs=185.8
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 395 (744)
+..+++|++..+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++ ..+.++++.+++++++.|.+.
T Consensus 33 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~ 110 (395)
T PRK10054 33 YLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA--IPLVNNVTLVVLFFALINCAY 110 (395)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999999999999888888776 567778888888888888887
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
+...+...++.+|.+|+++|+++.|+.+...++|.+++|.+++.+.+ .||+..|++.+++.++..++..++.|++++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~ 189 (395)
T PRK10054 111 SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAI 189 (395)
T ss_pred HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 77888899999999999999999999999999999999999998875 69999999888877776555545445442211
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCChhhHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKST--FHLQIQETGF 553 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~~~ 553 (744)
+. ++. .....++.+++|.++...+..++..+....+..+.+.|+... .+.+....+.
T Consensus 190 ~~---~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (395)
T PRK10054 190 AT---ETG------------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAV 248 (395)
T ss_pred cc---chh------------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHH
Confidence 10 000 001125678888887777666666666665656667776542 3455556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.....+......+..|.+.||.++|+
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~~~~~~~ 275 (395)
T PRK10054 249 VLPVNAAMVVSLQYSVGRRLNAANIRP 275 (395)
T ss_pred HHHhhhhheeeehhHHHHHHccCCchh
Confidence 666666666667788889999988774
|
|
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-20 Score=203.12 Aligned_cols=235 Identities=11% Similarity=0.053 Sum_probs=188.9
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++.++.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+. . ..++.+.+++.|++.|++.+
T Consensus 26 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~-~~~~~~~l~~~~~~~g~g~~ 102 (355)
T TIGR00896 26 IRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILI--R-SAPGTALLFAGTALIGVGIA 102 (355)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHH--H-HhccHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999998887777765 4 56788888999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF--SWEAMFYFYGCMGLLWYLCWLWLSFEKPCL 474 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~ 474 (744)
...+....++.|++| ++|++++++.+....+|..+++.+++.+.+.. +||..|.+.+++.++..+. +.|+.+++
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---~~~~~~~~ 178 (355)
T TIGR00896 103 IINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---WIPQVRRR 178 (355)
T ss_pred HHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---Hhhhhccc
Confidence 888888888999986 68999999999999999999999998887764 3898887766554433222 22433221
Q ss_pred CCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Q psy15142 475 HPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFI 554 (744)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 554 (744)
.+.. ........++++++|.++...+..++....++....++|.|+++ .|++..+.+.+
T Consensus 179 ~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~ 237 (355)
T TIGR00896 179 VAAN--------------------QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSL 237 (355)
T ss_pred cCCC--------------------CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 1000 00011234567888888877777677777788888999999987 69999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 555 GSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 555 ~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
.++..++.++++++.|++.||+++|
T Consensus 238 ~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 238 LALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhccc
Confidence 9999999999999999999999654
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=219.38 Aligned_cols=329 Identities=13% Similarity=0.027 Sum_probs=220.9
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHh---cC-----ChhH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY---TK-----SEVT 192 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~---~~-----~~~~ 192 (744)
.++.+. +.|++.+++.++..+++++.|+++||+ |||++++++.++.+++.+.+.+ .+ +.++
T Consensus 45 ~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T PRK05122 45 QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL----------GPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLL 114 (399)
T ss_pred hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc----------CCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Confidence 344444 349999999999999999999999999 6777888887776665554443 32 3456
Q ss_pred HHHHHHHHHHhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhhH------h
Q psy15142 193 ATMALCLGVAFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDATK------E 265 (744)
Q Consensus 193 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 265 (744)
+++.|++.|++.+...+...+++.|..| ++||+++|+.+....+|.++++.+.........+.......... .
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 194 (399)
T PRK05122 115 LLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL 194 (399)
T ss_pred HHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 7888999999999988888888889887 46999999998888888777755432221111111100000000 0
Q ss_pred hhhhhc--hhhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhh
Q psy15142 266 GLEKFN--IEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQ 343 (744)
Q Consensus 266 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 343 (744)
.....+ .+++.....++.+++ .|......... ...+.....+...+. .+.|. ...++..+.+.++..++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~ 266 (399)
T PRK05122 195 ARPRPAVPPVKGERLPFRRVLGR----VWPYGMGLALA-SIGFGTIATFITLYY-AARGW--DGAALALTLFGVAFVGAR 266 (399)
T ss_pred HhcCCCCCCCCccchhHHHHHHH----HHHHHHHHHHH-HHHHHHHHHHHHHHH-HHccc--ccchHHHHHHHHHHHHHH
Confidence 000000 000001111111111 11111111000 011111101111111 22344 344666777888889999
Q ss_pred hhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHH
Q psy15142 344 VPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAF 423 (744)
Q Consensus 344 ~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~ 423 (744)
++.|++.||+|+|+.+..+.++.+++.++ ....++.+.+++..++.|++.+..++.....+.|.+|+++||++.|+++
T Consensus 267 ~~~g~l~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 344 (399)
T PRK05122 267 LLFGNLINRLGGLRVAIVSLLVEILGLLL--LWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYS 344 (399)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999998888877777766 4556677777788899999999888888888899999999999999999
Q ss_pred HHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 424 CGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 424 ~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
....+|..+++.+.|.+.+..||+..|++.+++.++..++.+++.++
T Consensus 345 ~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 345 VFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999888887776666655433
|
|
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-20 Score=203.27 Aligned_cols=238 Identities=13% Similarity=0.089 Sum_probs=195.6
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|+++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++ ...+++++.+++.|++.|++.+.
T Consensus 35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~~ 112 (394)
T PRK11652 35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLV--ALFAHSLTVLIAASAIQGLGTGV 112 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHhhhhH
Confidence 5789999999999999999999999999999999999999999999988888877 56778899999999999999988
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+....+..|.++.++|+.+.++...+..++..++|.+++.+.+..|||+.|++.++..++..++..++.||+++..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (394)
T PRK11652 113 GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADAR 192 (394)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccc
Confidence 88888889999999999999999999999999999999999999989999999998877766655555555665432111
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
+++ ....++.+++++.++...+..+....+...+..+.+.++++.+|+++.+.+++...
T Consensus 193 --~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 251 (394)
T PRK11652 193 --RTR-------------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFIL 251 (394)
T ss_pred --hhH-------------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHH
Confidence 000 01235667788887766655555555566666677888888789999999988888
Q ss_pred HHHHHHHHHHHHHHHhHHhhh
Q psy15142 558 PHLLMTIVVPCGGMLADHLRK 578 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~ 578 (744)
..++.+++.++.+++.||.++
T Consensus 252 ~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 252 PIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999999998874
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=225.95 Aligned_cols=334 Identities=11% Similarity=-0.049 Sum_probs=217.3
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHh-----cCChhHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY-----TKSEVTATMA 196 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 196 (744)
++.+. +.|++.+++++++.++.+++|+++||+ |||+++.+++++.+++.++.++ +++.+.++++
T Consensus 59 ~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 59 YGLSTTELGMIGLGFSITYGVGKTLVGYYADGK----------NTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc----------CccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 34443 349999999999999999999999999 6666776776666665555543 6889999999
Q ss_pred HHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc--cc-hhhHHHhH----h--h---h
Q psy15142 197 LCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST--MD-ADMQQKAI----D--A---T 263 (744)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~--~~-~~~~~~~~----~--~---~ 263 (744)
|++.|++++...+...++++|+.|+ +||+++|+.+.+.++|.++++.+...... .. .+...... . . .
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~ 208 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence 9999999999889888999999985 69999999999999988887553311100 00 00000000 0 0 0
Q ss_pred Hhhh-hhhc----------------hhhHH--H-H-HHHHhhhh---cCCCcceehhhhhhcccccchhhheeeeccccc
Q psy15142 264 KEGL-EKFN----------------IEREV--A-T-YIKQYFEN---AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVK 319 (744)
Q Consensus 264 ~~~~-~~~~----------------~~~~~--~-~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (744)
.... +..+ .++.. . + ...+.+.+ +.+..|...+..++.... ......+.+.+..+
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~p~yl~~ 287 (467)
T PRK09556 209 LRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIV-RIGIDNWSPVYAFQ 287 (467)
T ss_pred HHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0000 0000 00000 0 0 00010111 111122222222211111 11111222223356
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhh
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 399 (744)
.+|++..+.++..++..++..++.+++|+++||+|||+.+.....+..++..+......++...+.+.+++.|++..+..
T Consensus 288 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 367 (467)
T PRK09556 288 ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQ 367 (467)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHH
Confidence 78999999999999999999999999999999999998876655444433322112233455556677777776544444
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhh-HHHhhHHHHHHhhh------------ccCchhHHHHHHHHHHHHHHHHHh
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYA-GIVLGLPISAILTE------------HFSWEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~-g~~ig~~i~~~l~~------------~~gw~~~f~~~~~~~~~~~~~~~~ 466 (744)
.....+..|.+|++.||++.|+.+...++ |..++|.+.|.+.+ ..||+..|++.+++.++..++.++
T Consensus 368 ~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 368 LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 44456777999999999999999988886 77999999999999 578999999887777776555544
Q ss_pred h
Q psy15142 467 L 467 (744)
Q Consensus 467 ~ 467 (744)
+
T Consensus 448 ~ 448 (467)
T PRK09556 448 V 448 (467)
T ss_pred H
Confidence 4
|
|
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-20 Score=205.51 Aligned_cols=246 Identities=13% Similarity=0.045 Sum_probs=188.4
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHhhcChHHHHHHHHHHhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~~ 395 (744)
.++++|+++.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++.. ...+++++.++++|+++|++.
T Consensus 52 i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~ 131 (438)
T PRK10133 52 FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGL 131 (438)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999999999999999887631 245788999999999999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-c-------------------------cCchhH
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-H-------------------------FSWEAM 449 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-~-------------------------~gw~~~ 449 (744)
+...+..+.++.|+.|+++|+..+++.+....+|..+++.+++.+.. . .+||+.
T Consensus 132 g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~ 211 (438)
T PRK10133 132 GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTP 211 (438)
T ss_pred HHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHH
Confidence 99999999999998777777778999999999999999998875431 0 245556
Q ss_pred HHHHHHHHHHHHHHH-HhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHH
Q psy15142 450 FYFYGCMGLLWYLCW-LWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWN 528 (744)
Q Consensus 450 f~~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 528 (744)
|+....+.++..++. ....||.+.++. + + .........+++++++|.++...+..++....
T Consensus 212 f~~~~~v~~~~~~~~~~~~~p~~~~~~~--~--~--------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~ 273 (438)
T PRK10133 212 YMIIVAIVLLVALLIMLTKFPALQSDNH--S--D--------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGA 273 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcccc--c--c--------------ccccchhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 654333322222222 222232211100 0 0 00000112356788999888777777777777
Q ss_pred HHHHHHHHHHHH-HHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 529 FYLLVLFQASYL-KSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 529 ~~~~~~~~p~~l-~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+...|.+.|+ ++.+|+++.++++...+..++.++++++++++.||+++|+
T Consensus 274 ~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~ 326 (438)
T PRK10133 274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK 326 (438)
T ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 777778888885 5567999999999999999999999999999999999874
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=214.16 Aligned_cols=333 Identities=11% Similarity=0.043 Sum_probs=229.8
Q ss_pred hhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.++.+.. .|++.+++.++..++.+++|+++||+ |||+.+..+.++.+++.++++++++.+.++++|++.
T Consensus 36 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~----------g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~ 105 (394)
T PRK03699 36 YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII----------PLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVL 105 (394)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHH
Confidence 3445543 49999999999999999999999999 677788888888999999999999999999999999
Q ss_pred HHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC-cccchhhHHHhHhh----hH---hhhhhhc
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK-STMDADMQQKAIDA----TK---EGLEKFN 271 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~----~~---~~~~~~~ 271 (744)
|++.|...+...+++.|..|+ +||+.++..+....+|+.+++.+.... .....+........ .. ....+.+
T Consensus 106 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p 185 (394)
T PRK03699 106 GVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFP 185 (394)
T ss_pred HHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999998888888889999985 699999998888888877776543211 11111111110000 00 0000100
Q ss_pred h-hhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhh
Q psy15142 272 I-EREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFA 350 (744)
Q Consensus 272 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 350 (744)
. +++..+..++..+..+.+.........+...........+.+.+..+.+|++..+.+++.+.+.++..++.++.|+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~ 265 (394)
T PRK03699 186 ALGKHAPKADKPVAKEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIV 265 (394)
T ss_pred cccccCccccCccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000001111111111111111111111112222223333567899999999999999999999999999999
Q ss_pred hccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHH
Q psy15142 351 SRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGI 430 (744)
Q Consensus 351 Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~ 430 (744)
||+|||+++.....+.++...+ ....++...+.+..++.|++.+..++...++..+..| +.+++..+.......+|.
T Consensus 266 dr~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~ 342 (394)
T PRK03699 266 RFFDLQRILTVLAGLALVLMYL--FVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGT 342 (394)
T ss_pred HHhchhhHHHHHHHHHHHHHHH--HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHH
Confidence 9999999988777766665554 3455666666667788898888888888888888776 456788888888999999
Q ss_pred HhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 431 VLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 431 ~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.++|.+.|.+.+..|++..++..+++.+++.+++...
T Consensus 343 ~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 343 MLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999998888877765554443
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=215.15 Aligned_cols=319 Identities=10% Similarity=-0.018 Sum_probs=218.6
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.++..++..+++++.|+++||+ |||+.++++.++.+++.++++++++++.+++.|++.|
T Consensus 42 ~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 111 (405)
T TIGR00891 42 FGLTTVDAASLISAALISRWFGALMFGLWGDRY----------GRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIG 111 (405)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44444 349999999999999999999999999 7777888898989999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh--h--------hH-hhhhh
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID--A--------TK-EGLEK 269 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~-~~~~~ 269 (744)
++.+...+...+++.|..|+ +|++..|+.+.+..+|.++++.+...........++.... . .. ...++
T Consensus 112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 191 (405)
T TIGR00891 112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEA 191 (405)
T ss_pred hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999899999999985 6999999999999998888866433222111100110000 0 00 00000
Q ss_pred hchh------hHHHHHHHHhh-----------------hhcCCCcceehhhhhh---cccccchhhheeeeccccccccc
Q psy15142 270 FNIE------REVATYIKQYF-----------------ENAYGPYWQCVVGRNF---GSYVSFETHYIYFYLGKVKHINW 323 (744)
Q Consensus 270 ~~~~------~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~ 323 (744)
...+ +...+..++.. .+...+.|........ ...........+...+..+++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (405)
T TIGR00891 192 EDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGL 271 (405)
T ss_pred hhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCC
Confidence 0000 00000000000 0000111111111100 00010111111122223456789
Q ss_pred CchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHh
Q psy15142 324 TVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVH 403 (744)
Q Consensus 324 s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 403 (744)
+..+.+++.+...++..++.++.|+++||+|||+.+..+.++.++..... .....+.+.+.+..++.|++.++..+...
T Consensus 272 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (405)
T TIGR00891 272 SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPV-FAIGANVAVLGLGLFFQQMLVQGIWGILP 350 (405)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHH-HHhCCchHHHHHHHHHHHHHHccchhhHH
Confidence 99999999999999999999999999999999999888876654333321 23344555566666777777777778888
Q ss_pred HHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHH
Q psy15142 404 GIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYF 452 (744)
Q Consensus 404 ~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~ 452 (744)
+++.|.+|++.|++++|+.+....+|..++|++.|.+.++.| |+..+..
T Consensus 351 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 351 KHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999999999999999999999999999888 7766554
|
|
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=216.45 Aligned_cols=324 Identities=12% Similarity=0.012 Sum_probs=200.3
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChh--------HHHHHHHHHH
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV--------TATMALCLGV 201 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 201 (744)
+.+.++.+++..+|++++|+++||+ |||+.+.+++++.+++.++++++++.. .++++|++.|
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~----------Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 135 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKH----------GRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQG 135 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 4556778888889999999999999 788899999999999999999988763 5788999999
Q ss_pred HhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcc------cchhhHHHhHhh----------hH
Q psy15142 202 AFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKST------MDADMQQKAIDA----------TK 264 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~----------~~ 264 (744)
++.|...+...++++|+.| ++||+..++.+.+.+.|.++++++...... .....|+..... ..
T Consensus 136 ~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~ 215 (432)
T PRK10406 136 LSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLR 215 (432)
T ss_pred hhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 479999999888887777766543221110 011112211110 00
Q ss_pred hhhhhhchhh-HH---HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHH
Q psy15142 265 EGLEKFNIER-EV---ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYL 340 (744)
Q Consensus 265 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 340 (744)
...++.+..+ +. ...+++.++ +++.|...+...+.....++....+...+..+.+|.+..+.++..++..++..
T Consensus 216 ~~~~e~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~ 293 (432)
T PRK10406 216 RQLDETSQQETRALKEAGSLKGLWR--NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFM 293 (432)
T ss_pred hcCCCCchHHHhhhcccccHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 0011100000 00 011222222 11223222222222122222222222222345678888888888888888888
Q ss_pred HhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh--hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHH
Q psy15142 341 ITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI--KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRL 418 (744)
Q Consensus 341 ~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~ 418 (744)
+++++.|+++||+|||+++.++.++.++......... ..+....+....+.+++.+...+....+++|++|++.|+++
T Consensus 294 i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~ 373 (432)
T PRK10406 294 LIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALG 373 (432)
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchh
Confidence 8899999999999999988776655443332210111 12222222222222233334445677889999999999999
Q ss_pred HHHHHHHhhh-HHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHh
Q psy15142 419 ATIAFCGTYA-GIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 419 ~g~~~~~~~~-g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~ 466 (744)
.|+.+...++ ++...|.+.+.+ +..| |...+++.++..++..+..++
T Consensus 374 ~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 374 VGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred hhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999876554 344577877755 4445 555555555555555444443
|
|
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-21 Score=214.19 Aligned_cols=335 Identities=14% Similarity=0.054 Sum_probs=214.8
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc---------CC---hhHHHH
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT---------KS---EVTATM 195 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~ 195 (744)
+.|++.++.+++..++++++|+++||+ |||++++++.++++++.++++++ ++ ++.+++
T Consensus 56 ~~~~~~s~~~ig~~~~~~~~G~l~dr~----------Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 125 (479)
T PRK10077 56 LLGFCVASALIGCIIGGALGGYCSNRF----------GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVI 125 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHH
Confidence 349999999999999999999999999 78888989988888888777753 12 455678
Q ss_pred HHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc------cchhhHHHhHhh------
Q psy15142 196 ALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST------MDADMQQKAIDA------ 262 (744)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~------ 262 (744)
.|++.|++.|...+...++++|+.|+ +||+++|+.+.+..+|.++++++...... .....|+.....
T Consensus 126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 126 YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPAL 205 (479)
T ss_pred HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHH
Confidence 89999999999999999999999985 69999999999999988877654322110 011111111100
Q ss_pred --h--Hh-hhhhhc------hhhH-------------HH---HHHHHhhh---hcCCCcceehhhhh-----hcccccc-
Q psy15142 263 --T--KE-GLEKFN------IERE-------------VA---TYIKQYFE---NAYGPYWQCVVGRN-----FGSYVSF- 306 (744)
Q Consensus 263 --~--~~-~~~~~~------~~~~-------------~~---~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~- 306 (744)
. .. ..++.+ ..++ .. +..++... .+....+....... ...+...
T Consensus 206 ~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
T PRK10077 206 LFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFV 285 (479)
T ss_pred HHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHh
Confidence 0 00 000000 0000 00 01111111 00111111100000 0000000
Q ss_pred -hhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC-hH-H
Q psy15142 307 -ETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN-PG-S 383 (744)
Q Consensus 307 -~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-~~-~ 383 (744)
.....++.....++.|.+.....+......+...++.+++|+++||+|||++++.+.++++++.+++......+ .. .
T Consensus 286 ~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~ 365 (479)
T PRK10077 286 GINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV 365 (479)
T ss_pred ChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence 00011111122345677766667777777888889999999999999999999999998888776632221112 11 2
Q ss_pred HHHHHHHHhhhhhh-hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh------hccCchhHHHHHHHH
Q psy15142 384 VIIVRICQGLVEGV-CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT------EHFSWEAMFYFYGCM 456 (744)
Q Consensus 384 ~~~~~~l~G~~~~~-~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~------~~~gw~~~f~~~~~~ 456 (744)
.....++.+++.+. ..|..+++++|.+|++.|++++|+.+....+|..+++.+.+.+. +.++|+..|++.+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 445 (479)
T PRK10077 366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHH
Confidence 22233344444333 34678899999999999999999999999999999877766544 567899999988888
Q ss_pred HHHHHHHHHhhcccCC
Q psy15142 457 GLLWYLCWLWLSFEKP 472 (744)
Q Consensus 457 ~~~~~~~~~~~~~e~p 472 (744)
+++..++.+++.||++
T Consensus 446 ~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 446 GVLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHHhccccCC
Confidence 7777766666666653
|
|
| >KOG0569|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=207.06 Aligned_cols=334 Identities=12% Similarity=-0.005 Sum_probs=234.1
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHH---HhcCChhHHHHHHHHHHHhhhc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVV---AYTKSEVTATMALCLGVAFSGF 206 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~ 206 (744)
+.+.++.++|.++|+++.|+++||+ |||..+.++.++..++.+++ -.+++...+++.|++.|+..|.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~----------GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl 132 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF----------GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGL 132 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----------cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHH
Confidence 7888999999999999999999999 66655555555444444433 3567888899999999999999
Q ss_pred ccccccccccccCcch-hhHHHHHHhhhhhhhhHHHhhhc-----------------------------cCCcccchhhH
Q psy15142 207 AISGYNVNHLDIAPRY-ASILMGMSNGIGTIDIFISYIGR-----------------------------RGKSTMDADMQ 256 (744)
Q Consensus 207 ~~~~~~~~~~e~~p~~-rg~~~g~~~~~~~~g~~~~~~~~-----------------------------~~~~~~~~~~~ 256 (744)
.......++.|++|++ ||....+.+.+..+|.+++..+. ...++.|.+..
T Consensus 133 ~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll 212 (485)
T KOG0569|consen 133 STGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLL 212 (485)
T ss_pred HHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHH
Confidence 9999999999999975 99999999999888877773322 12234443332
Q ss_pred H--HhHhhhHhhhhhhchhh----HHH----------------HHHHHhhhhc-CCCcceehhhhhhcccccchhhheee
Q psy15142 257 Q--KAIDATKEGLEKFNIER----EVA----------------TYIKQYFENA-YGPYWQCVVGRNFGSYVSFETHYIYF 313 (744)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~----~~~----------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (744)
. ...+++.+.++.++... +.. ..+.+.++++ .++...+.+...+.....+.....+|
T Consensus 213 ~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Y 292 (485)
T KOG0569|consen 213 IKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFY 292 (485)
T ss_pred HHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHH
Confidence 2 11122333333322111 000 0122333322 22222333444444444444444444
Q ss_pred ecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh--hcCh--H---HHHH
Q psy15142 314 YLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI--KLNP--G---SVII 386 (744)
Q Consensus 314 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~--~---~~~~ 386 (744)
....-.+.|++..++.+......+...+..+++.++.||+|||++++.+..++.+..+++.... .... | ..++
T Consensus 293 st~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 293 STSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 4444567789999999999999999999999999999999999999999988887776632111 1111 1 1223
Q ss_pred HHHHHhhhh-hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 387 VRICQGLVE-GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 387 ~~~l~G~~~-~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
+.++..++. -+..|+.+-+.+|++|++.|..++++....+.+..++.......+.+.+|- +.|+...+.+++..+..+
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~ 451 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLY 451 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHH
Confidence 333333333 234688899999999999999999999999999999999999888888776 788888888888888888
Q ss_pred hhcccCCCC
Q psy15142 466 WLSFEKPCL 474 (744)
Q Consensus 466 ~~~~e~p~~ 474 (744)
+.+|||..+
T Consensus 452 ~~lPETkgr 460 (485)
T KOG0569|consen 452 RYLPETKGR 460 (485)
T ss_pred HhCcccCCC
Confidence 888998543
|
|
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=209.82 Aligned_cols=317 Identities=15% Similarity=0.085 Sum_probs=241.2
Q ss_pred ccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy15142 124 QFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVA 202 (744)
Q Consensus 124 ~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (744)
+.+.. .|++.++..++..++.++.|+++||+ |||+.+.++.++..++.++..+.++.+.+.+.|++.|+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 99 (352)
T cd06174 30 GLSASQAGLIVSAFSLGYALGSLLAGYLSDRF----------GRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGL 99 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh----------CCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence 44443 49999999999999999999999999 67778889999999999999999999999999999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhhHhhhhhhchhhHHHHHHH
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDATKEGLEKFNIEREVATYIK 281 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (744)
+.+...+...+++.|+.|+ +|++.+|+.+....+|..+++.+.....+...+..............- ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 170 (352)
T cd06174 100 GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLA---------LLL 170 (352)
T ss_pred ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH---------HHH
Confidence 9999999999999999986 799999999999999999987755433221111110000000000000 000
Q ss_pred HhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCch-hhH
Q psy15142 282 QYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANR-IFG 360 (744)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~-~l~ 360 (744)
-.. . +.........+...........+......+.+|.+..+.+++.+...++..++.++.+++.||+|||+ .+.
T Consensus 171 ~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (352)
T cd06174 171 LFL-L---RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLL 246 (352)
T ss_pred HHH-H---HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 000 0 11111111111111111111111122223445888999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHh
Q psy15142 361 TAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAIL 440 (744)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l 440 (744)
.+.++..++.+. ....++.+.+.+..++.|++.+...+...+++.|..|+++|++.+|+.+....+|..+++.+.+.+
T Consensus 247 ~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 247 IGLLLAALGLLL--LALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888888877 556677788888999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 441 TEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 441 ~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
.+..+|+..+.+.+++.++..++.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 325 LDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred hcccCcchHHHHHHHHHHHHHHHhe
Confidence 9989999999999988887766554
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-20 Score=204.36 Aligned_cols=239 Identities=16% Similarity=0.157 Sum_probs=176.0
Q ss_pred cccccCchh-----hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhh
Q psy15142 319 KHINWTVAQ-----ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGL 393 (744)
Q Consensus 319 ~~~g~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 393 (744)
+++|++..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ....++++.+++.|++.|+
T Consensus 42 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 119 (408)
T PRK09874 42 EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL--MGLAQNIWQFLILRALLGL 119 (408)
T ss_pred HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHH
Confidence 567777554 488889999999999999999999999999999998888888777 5667889999999999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
+.+ ..+....++.+.+|+++|+++.++......+|..++|.+++.+.+..+|++.|++.+++.++..++.+++.+|+++
T Consensus 120 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (408)
T PRK09874 120 LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ 198 (408)
T ss_pred hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 754 5677888899999999999999999999999999999999999998999999999988877776666666565532
Q ss_pred CCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh---
Q psy15142 474 LHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYA-IIVANFCRSWNFYLLVLFQASYLKSTFHLQIQ--- 549 (744)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~--- 549 (744)
..+. ++.... ....+.+++++++. .....+........+..+.+.|+.+..+....
T Consensus 199 ~~~~---~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (408)
T PRK09874 199 PVSK---KEMLHM-----------------REVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAF 258 (408)
T ss_pred cccc---hhhhHH-----------------HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 2111 000000 01223345555443 22223333344445556777777764332221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 550 ETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 550 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+.+..+..++.+++.++.|++.||+++|+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~ 289 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEK 289 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 2345556667788888999999999999885
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.3e-22 Score=215.30 Aligned_cols=326 Identities=10% Similarity=0.001 Sum_probs=220.4
Q ss_pred hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHH---HHh-----cCChh
Q psy15142 121 AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVV---VAY-----TKSEV 191 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~---~~~-----~~~~~ 191 (744)
..+|.|.. .|++.++++++..++++++|+++||+ |||+.++++.+..+++.+. .++ .++.+
T Consensus 44 ~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (392)
T PRK12382 44 HDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY----------GAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFA 113 (392)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh----------cchHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Confidence 34566553 49999999999999999999999999 6777777777666554332 222 24667
Q ss_pred HHHHHHHHHHHhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----hhH--
Q psy15142 192 TATMALCLGVAFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----ATK-- 264 (744)
Q Consensus 192 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~-- 264 (744)
.+++.|++.|++.+...+...+++.|..| ++|++++|+.+.+.++|.++++.+.........+....... ...
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 193 (392)
T PRK12382 114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA 193 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 78889999999999888877888889887 47999999999988888887766433221111111100000 000
Q ss_pred --hhhhhhchhhHHHHHHHHhhhhcCCCcceehhhhhhccccc-chhhheeeecccccccccCchhhHHHHHHHHHHHHH
Q psy15142 265 --EGLEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVS-FETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLI 341 (744)
Q Consensus 265 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~ 341 (744)
....+.+.+++.++..++..+. .|...+......... ....+... + .++.+++ ..++..+.+.++..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~--~-~~~~~~~--~~~~~~~~~~~~~~~ 264 (392)
T PRK12382 194 FNGTVRKVPAHAGERPSLWSVVGL----IWKPGLGLALQGVGFAVIGTFVSL--Y-FASKGWA--MAGFTLTAFGGAFVL 264 (392)
T ss_pred HHHhccCCCCCcccCchHHHHHHH----HHHhHHHHHHHHHHHhHHHHHHHH--H-HHhcCCc--hhHHHHHHHHHHHHH
Confidence 0000000000000111111110 011111111100000 00111111 1 1233443 345666677888889
Q ss_pred hhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHH
Q psy15142 342 TQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATI 421 (744)
Q Consensus 342 ~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~ 421 (744)
++++.|++.||+|+|+.+..+..+.+++.++ ....++.+.+++..++.|++.+...+...+.+.|.+|+++||++.|+
T Consensus 265 ~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 342 (392)
T PRK12382 265 MRVLFGWMPDRFGGVKVAIVSLLVETVGLLL--LWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGG 342 (392)
T ss_pred HHHHHHHHHHhcCCCeehHHHHHHHHHHHHH--HHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 9999999999999999999888888877766 45566777777888999999888888888899999999999999999
Q ss_pred HHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 422 AFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 422 ~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.+....+|..++|.+.+.+.++.||+..|.+.+++.++..++.+++
T Consensus 343 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 343 YAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999988887776665544
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-22 Score=226.74 Aligned_cols=261 Identities=13% Similarity=0.183 Sum_probs=202.6
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-----------------
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL----------------- 379 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~----------------- 379 (744)
.+++++++.++.|++.+.+.++++++.++.+++.||+|||+++.++.++++++.++. ++.+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~--alphf~~~~y~~~~~~~~~~~ 136 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL--SLPHFLSGRYSYSTTVSSTGN 136 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH--hChHHhcCCcccccccccccc
Confidence 367899999999999999999999999999999999999999999999999999883 3321
Q ss_pred ----------------------------------ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHH
Q psy15142 380 ----------------------------------NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG 425 (744)
Q Consensus 380 ----------------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~ 425 (744)
.+..++++|+++|+|.+..++...+++.|++|+++|++++|+.+.+
T Consensus 137 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 137 LSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred ccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHH
Confidence 2456778999999999999999999999999999999999999999
Q ss_pred hhhHHHhhHHHHHHhhhcc----------------------CchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC--hH
Q psy15142 426 TYAGIVLGLPISAILTEHF----------------------SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTIS--GR 481 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~--~~ 481 (744)
..+|.++|+++++.+.+.+ +|+..|++.+++.++..+.++++.++.|+.....+ .+
T Consensus 217 ~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~ 296 (633)
T TIGR00805 217 AVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVH 296 (633)
T ss_pred HHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhh
Confidence 9999999999999887643 27777888888877766655555333332211111 01
Q ss_pred HHHHHHHhhcccccc--cCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy15142 482 ELLYIEKSLGSSVQV--AMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPH 559 (744)
Q Consensus 482 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 559 (744)
+.+...+........ .........++.++++|.++...+..++.....+++.+|+|.|+++.+|+++.+++++..+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~ 376 (633)
T TIGR00805 297 ETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVN 376 (633)
T ss_pred hhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhh
Confidence 100000000000000 000001234667899999999999999999999999999999999999999999999988776
Q ss_pred H-HHHHHHHHHHHHhHHhhhc
Q psy15142 560 L-LMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 560 ~-~~~i~~~~~g~l~dr~g~r 579 (744)
+ +.+++.+++|+++||++.+
T Consensus 377 i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 377 LPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred hhHHHHHHhhhhheeeeeccc
Confidence 6 5688999999999999865
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-20 Score=202.69 Aligned_cols=233 Identities=12% Similarity=0.056 Sum_probs=182.2
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|++..+.|++.+++.+...+.++++|+++||+|||+++..+.++.+++.++ ....++++.+++.|++.|++.+
T Consensus 37 ~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 37 FVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT--MAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999998887 5667888889999999999998
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...+...+++.|++|+++|+++.|+.+....+|..+||.+++.+. .+||++.|++.++..++..++..++.||.+.. +
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~ 192 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-T 192 (400)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-c
Confidence 888999999999999999999999999999999999999999998 67999999998877776655544554542110 0
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
..+ ....+++.++++|+++...+..+...........++|.|+++. +.++.+.+.+.+
T Consensus 193 --~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~l~~ 250 (400)
T PRK11646 193 --VRT-------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI-AGSPSAVKWMYA 250 (400)
T ss_pred --cch-------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-cCCchHHHHHHH
Confidence 000 0112466778888877655554444444444556789998875 457778888877
Q ss_pred HHHHHHHHHHHHHHHHhHH
Q psy15142 557 LPHLLMTIVVPCGGMLADH 575 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr 575 (744)
+..++..++....+.+.||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~ 269 (400)
T PRK11646 251 IEACLSLTLLYPIARWSEK 269 (400)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7776666555555555554
|
|
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-20 Score=206.12 Aligned_cols=242 Identities=14% Similarity=0.167 Sum_probs=174.6
Q ss_pred cccccccCchhhHHH-HHHH-----HHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChH--------
Q psy15142 317 KVKHINWTVAQESAV-DSSF-----FWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPG-------- 382 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~-~~~~-----~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~-------- 382 (744)
..++++.++.+.+.+ .+.. .++..+++++.|+++||+|||++++.+.++++++.++ .+++++++
T Consensus 41 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~ 118 (434)
T PRK15075 41 IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLL--IAFVPGYATIGLAAPL 118 (434)
T ss_pred HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHH--HHhCCcHHHHHHHHHH
Confidence 356788877765443 2222 2223467899999999999999999999999999888 66777765
Q ss_pred HHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh--------hccCchhHHHHHH
Q psy15142 383 SVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT--------EHFSWEAMFYFYG 454 (744)
Q Consensus 383 ~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~--------~~~gw~~~f~~~~ 454 (744)
.++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.+++.+. +.+|||+.|++.+
T Consensus 119 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 119 LVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 46889999999999999989999999999999999999999988888888888777652 4679999998754
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHH-HHHHHHHHHHHHHHH
Q psy15142 455 CMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAI-IVANFCRSWNFYLLV 533 (744)
Q Consensus 455 ~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 533 (744)
+..++. ++. ++.+++. ++. ..+. .+ ......++...+++..+.. ++..++....++.+.
T Consensus 199 ~~~~~~----~~~-~~~~~e~-----~~~--~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
T PRK15075 199 LIVPFI----FLI-RRSLEET-----EEF--LARK-HR-------PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLIT 258 (434)
T ss_pred HHHHHH----HHH-HHhcCCC-----HHH--HHhh-hc-------cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 432111 111 2221111 000 0000 00 0011224444555555433 334444566777888
Q ss_pred HHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 534 LFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 534 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.|.|.|+++.+|++..+++++..+..++++++.+++|+++||++||+
T Consensus 259 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~ 305 (434)
T PRK15075 259 VYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP 305 (434)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 99999999878999999888888888999999999999999999885
|
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=216.23 Aligned_cols=336 Identities=11% Similarity=-0.038 Sum_probs=216.7
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.+++.++..++++++|+++||+ |||+++.+++++.+++.++++++++++.+++.|++.|
T Consensus 53 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 122 (434)
T PRK11663 53 LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS----------NARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNA 122 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc----------CCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45554 349999999999999999999999999 6777888999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----hhH----h-hhhhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----ATK----E-GLEKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~-~~~~~~ 271 (744)
++.|...+...+++.|+.|+ +||+.+|+++.+.++|.++++.+.........+....... ... . ...+.+
T Consensus 123 ~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p 202 (434)
T PRK11663 123 FFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKP 202 (434)
T ss_pred HHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99998888888999999985 6999999999999999888866432222111111110000 000 0 000000
Q ss_pred hh----------hH---H-H------HHHHHhhhh---cCCCcceehhhhhhcccccchhhheeeecccccccccCchhh
Q psy15142 272 IE----------RE---V-A------TYIKQYFEN---AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQE 328 (744)
Q Consensus 272 ~~----------~~---~-~------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 328 (744)
.+ .+ . . ...++.+.+ +.+..|...+.. +...........+...+..+++|++..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 281 (434)
T PRK11663 203 QAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSY-VLVYVVRAAINDWGNLYMSETLGVDLVTA 281 (434)
T ss_pred hhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCHHHH
Confidence 00 00 0 0 001111110 011122222211 11111111111122223345679999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhcc--CCchhh-HHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHH
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRY--PANRIF-GTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGI 405 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~--Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 405 (744)
++..+.+.++..++.+++|+++||+ ++|+.. ....+...+...........+.....+..++.|++..........+
T Consensus 282 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (434)
T PRK11663 282 NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMA 361 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9999999999999999999999999 333332 2221111111111101112233333333444454433333344567
Q ss_pred hhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcc
Q psy15142 406 WRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSF 469 (744)
Q Consensus 406 ~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 469 (744)
++|.+|++.|++++|+.+...++|..++|.+.|.+.++.||+..|++.++++++..+..+...+
T Consensus 362 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 362 AAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999999999999998888777666655433
|
|
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-20 Score=197.80 Aligned_cols=217 Identities=25% Similarity=0.429 Sum_probs=195.4
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.+..+.+++.+++.++..+++++.|+++||+|||+.+..+.++..++.++ ....++.+.+++.|++.|++.+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~~ 103 (352)
T cd06174 26 AEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL--LAFASSLWLLLVGRFLLGLGGGA 103 (352)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHccccc
Confidence 3567889999999999999999999999999999999999999999999998887 56668899999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..+|++.+++.+++.++..++..++ +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 174 (352)
T cd06174 104 LYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L-------- 174 (352)
T ss_pred ccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H--------
Confidence 9999999999999999999999999999999999999999999998899999999888877766655444 1
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
|.++...+..++..........+.|.++++..|.+..+.+.....
T Consensus 175 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T cd06174 175 -----------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSL 219 (352)
T ss_pred -----------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 456667777788888888999999999998778999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..++..++.++.+++.||+++|+
T Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 220 FGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999874
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=212.77 Aligned_cols=331 Identities=11% Similarity=-0.036 Sum_probs=217.8
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.++.+. +.|++.++..++..++.+++|+++||+ |||+.+.++.++.+++.++++++++++.+++.|++.
T Consensus 23 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (399)
T TIGR00893 23 DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF----------GARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLL 92 (399)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc----------CcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 344544 349999999999999999999999999 677788888888899999999999999999999999
Q ss_pred HHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----hhH-----hhhhh-
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----ATK-----EGLEK- 269 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~- 269 (744)
|++.+...+...+++.|+.|+ +|++.+|+.+...++|.++++.+.........+....... ... ....+
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 93 GAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 999999999999999999985 6999999999999999888866443222111111100000 000 00000
Q ss_pred hch----hhHHHH---------------------HHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccC
Q psy15142 270 FNI----EREVAT---------------------YIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT 324 (744)
Q Consensus 270 ~~~----~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 324 (744)
... .++.+. ..++.++ .++.+.. ....+...........+...+..+.+|.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (399)
T TIGR00893 173 PQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLK--DRRVWGL-ALGQFLVNIGLGFFLTWFPTYLVQERGLS 249 (399)
T ss_pred CCccccCCHHHHhhcchhhccccccccccCCCccchHHHhc--CHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhccc
Confidence 000 000000 0000010 0111111 11111111111111112222234567888
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhccCCch--hhHHHHHHHH--HHHHHHH--HHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRYPANR--IFGTAIACTS--FLHLFVP--TAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~--~l~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
..+.+++.++..++..++.++.|+++||+|||+ .......... +...+.. ....++....+...++.+++ .+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 328 (399)
T TIGR00893 250 ILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFG-LGA 328 (399)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhc-hhh
Confidence 889999999999999999999999999999996 2111111110 1111100 11122333333333333344 337
Q ss_pred hhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHh
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~ 466 (744)
.+...++++|.+|++.|+++.|+.+....+|..++|.+.|.+.+..| |+..|++.+++.++..+..++
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 329 GAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999888 999998888877766555543
|
|
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-21 Score=212.98 Aligned_cols=329 Identities=12% Similarity=-0.025 Sum_probs=226.9
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHH---h--cCChhHHHHHHHHHHH
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA---Y--TKSEVTATMALCLGVA 202 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~ 202 (744)
+.|++.++..++..+++++.|+++||+ |||+++.++.++.+++.++.+ + .++++++.++|++.|+
T Consensus 53 ~~g~~~~~~~l~~~~~~~~~G~l~dr~----------g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 122 (417)
T PRK10489 53 QVGLSVTLTGGAMFIGLMVGGVLADRY----------DRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGF 122 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHhhhc----------CCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 459999999999999999999999999 566666666666665554443 2 4567778888999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhh--------Hhhhhhhch-
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDAT--------KEGLEKFNI- 272 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~- 272 (744)
+.+...+...+++.|+.|+ +|++..++.+...++|.++++.+.........+.+....... .....+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 202 (417)
T PRK10489 123 FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPP 202 (417)
T ss_pred HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9888878888888999975 699999999999999888887654332211111111100000 000000000
Q ss_pred ----hhHH---HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhh
Q psy15142 273 ----EREV---ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVP 345 (744)
Q Consensus 273 ----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 345 (744)
++.. .+..+..++ .+..+...+...+. .. ......+...+..+.+|.++...+++.+++.++..++.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~ 278 (417)
T PRK10489 203 PQPREHPLRSLLAGFRFLLA--SPVVGGIALLGGLL-TM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALT 278 (417)
T ss_pred CcccccchHHHHHHHHHHHc--ChHHHHHHHHHHHH-HH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHH
Confidence 0000 111111111 11111111111111 11 1111112222234447888889999999999999999999
Q ss_pred hHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHH
Q psy15142 346 GGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG 425 (744)
Q Consensus 346 ~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~ 425 (744)
.+++.||.++++.+..+.++.+++.++ ....++.+...++.++.|++.+...+...+++.|..|++.||++.|+++..
T Consensus 279 ~~~l~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 356 (417)
T PRK10489 279 SGWLAHSARPGLLMLLSTLGSFLAVGL--FGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQ 356 (417)
T ss_pred HHHhhhccCcchHHHHHHHHHHHHHHH--HHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999988888888887777777666 456667766777888889888877788889999999999999999999999
Q ss_pred hhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 426 TYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
..+|..+||.+.|.+.+.+|++..++..+++.++..++.....++.+
T Consensus 357 ~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 357 NVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999998888888777776666655556543
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-21 Score=209.21 Aligned_cols=325 Identities=15% Similarity=0.076 Sum_probs=221.0
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcccc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAIS 209 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 209 (744)
|++.+++.++..++.++.|+++||+ |||+.++++.++.+++.++++++++++++++.|++.|++.+. .+
T Consensus 57 g~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~ 125 (408)
T PRK09874 57 GLVFSITFLFSAIASPFWGGLADRK----------GRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGF-VP 125 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh----------CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh-HH
Confidence 8889999999999999999999999 677788888888888888888889999999999999987654 45
Q ss_pred cccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----hhh-----Hhhhhhh-ch-hhHHH
Q psy15142 210 GYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI----DAT-----KEGLEKF-NI-EREVA 277 (744)
Q Consensus 210 ~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~-~~-~~~~~ 277 (744)
....++.|..|+ +||+..|+.+....+|.++++.+.....+...+...... ... ....++. .. +++..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (408)
T PRK09874 126 NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM 205 (408)
T ss_pred hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh
Confidence 566677788875 699999999999999988887654332221111110000 000 0000110 00 01001
Q ss_pred HHHHHhhhh-cCCCcceehhhhhhcccccchhhheeeecccccccccCch----hhHHHHHHHHHHHHHhhhhhHHhhhc
Q psy15142 278 TYIKQYFEN-AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVA----QESAVDSSFFWGYLITQVPGGFFASR 352 (744)
Q Consensus 278 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~~~~~~~g~l~Dr 352 (744)
...++.+.. +.++.+...+...+...............+..+..+ +.. ..+.+.++..++..++.+..|+++||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr 284 (408)
T PRK09874 206 LHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAG-NVSNIAFISGMIASVPGVAALLSAPRLGKLGDR 284 (408)
T ss_pred hHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111111111 111122211111111111111111111111111111 122 24556666778888888999999999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHh
Q psy15142 353 YPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVL 432 (744)
Q Consensus 353 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~i 432 (744)
+|||+.+..+.++.+++.+. ....++.+.+++.+++.|++.+...+...+++.+..|++.||+.+++.+....+|..+
T Consensus 285 ~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~ 362 (408)
T PRK09874 285 IGPEKILITALIFSVLLLIP--MSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVT 362 (408)
T ss_pred cccchhHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHh
Confidence 99999999888877766655 4555677778888999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 433 GLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 433 g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
||.++|.+.+..||+..|++.+++.++..++.++..
T Consensus 363 gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 363 GPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred hHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988887766665543
|
|
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-19 Score=196.99 Aligned_cols=237 Identities=13% Similarity=0.047 Sum_probs=166.8
Q ss_pred cccccccCchhhHHHHHHHHH-HHHHhhhhhHHhhhccCCchhhH-HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFW-GYLITQVPGGFFASRYPANRIFG-TAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLV 394 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 394 (744)
..+++|++.++.|++.+...+ +..++.+++++ +||+||||.++ .+.++.+++..+ .+++++++.+++.+.+.+..
T Consensus 42 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 42 LTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTL--FAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHH
Confidence 357899999999999776555 55566655566 99999998754 445555555555 45677787766665555555
Q ss_pred hhhhhhHHhHHhhhccCccch--hHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 395 EGVCYPAVHGIWRFWAPPLER--SRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 395 ~~~~~~~~~~~~~e~~p~~~R--g~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
.+...|....+..++.+++.| +...++.+.+..+|.+++|++++.+.+++|||..|++.++..++..++.+++.||.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 556778888888888776655 344578888999999999999999999999999999998887777666666667764
Q ss_pred CCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Q psy15142 473 CLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHS-MPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQET 551 (744)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 551 (744)
++++. +.++ .+. . .++ +..+......+........+..+.|.|+++.+|+++.+.
T Consensus 199 ~~~~~-~~~~-------------~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~ 254 (393)
T PRK15011 199 KELPL-ATGT-------------LEA-------P---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLA 254 (393)
T ss_pred CCCcc-cccc-------------ccc-------c---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 33221 0000 000 0 011 112222223333344455566789999988789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 552 GFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 552 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.+.+...++.+++.+++|+++||+++|+
T Consensus 255 g~~~~~~~~~~i~~~~~~G~l~dr~g~~~ 283 (393)
T PRK15011 255 GVMMGTAAGLEIPTMLIAGYFAKRLGKRF 283 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 98887777888889999999999999884
|
|
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-21 Score=208.73 Aligned_cols=329 Identities=10% Similarity=-0.024 Sum_probs=216.2
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhh-HHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKL-FNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
.++.+. +.|++.+++.+...+.+++.|+++||+ |||+ +++.+.++.+++.++++++++++.+++.|++
T Consensus 27 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (375)
T TIGR00899 27 EVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ----------GDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVL 96 (375)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 345544 349999999999999999999999999 5544 4445666666777788889998888888888
Q ss_pred HHHhhhcccccccccccccCcc-hhhHH--HHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH---hhh------Hhhh
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPR-YASIL--MGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI---DAT------KEGL 267 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~-~rg~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~ 267 (744)
.+.+.+...+...++..|+.|+ .|++. .|..+...++|.++++.+.....+...+...... ... ....
T Consensus 97 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 176 (375)
T TIGR00899 97 LSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFL 176 (375)
T ss_pred HHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 8777776777777788888764 35543 6777777788888776643322211111111000 000 0001
Q ss_pred hhhchhh---HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhh
Q psy15142 268 EKFNIER---EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQV 344 (744)
Q Consensus 268 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 344 (744)
.+.+.+. ......++.+++ ++.+...... +..+............+..+++|.++.+.+++.+.......++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 253 (375)
T TIGR00899 177 PSYPRGAPGALTRLEVRGLLAS--RDTRLLFVAC-TLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFML 253 (375)
T ss_pred CCcccCcccccCcchhhhhhcC--cchHHHHHHH-HHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1110000 000111111111 1111111111 111111111111112223466788888888888777777778889
Q ss_pred hhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHH
Q psy15142 345 PGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFC 424 (744)
Q Consensus 345 ~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~ 424 (744)
+.|++.||+|||+++..+.++..+..+. ....++.+.+++.+++.|++.+...+....++.|..|+ +++++.++++.
T Consensus 254 ~~g~l~~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 330 (375)
T TIGR00899 254 LAGYLIKRFGKRRLMLLAALAGVAFYTG--LAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTN 330 (375)
T ss_pred hHHHHHHHhcchhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHH
Confidence 9999999999999988877665555444 34455677777788889998888888888999999875 56799999999
Q ss_pred HhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHh
Q psy15142 425 GTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 425 ~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 466 (744)
..++|..++|.++|.+.+..||+..|++.+++.++..++..+
T Consensus 331 ~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 331 TGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999988887776665543
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-19 Score=191.57 Aligned_cols=292 Identities=9% Similarity=0.023 Sum_probs=200.1
Q ss_pred cccccccCchh-hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhh
Q psy15142 317 KVKHINWTVAQ-ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 317 ~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 395 (744)
+.+++|+|.++ .|.+.+++..+++++++++|+++||+|.|+++.++.+..++..++ .+++++...+.+.|++.|++.
T Consensus 52 L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L--~~fa~Sl~~L~i~R~llGvaE 129 (511)
T TIGR00806 52 LLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLL--LLLGTSVWHMQLMEVFYSVTM 129 (511)
T ss_pred HHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 35699999999 999999999999999999999999999999999999999999988 567788999999999999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHH--HHHHHHHHHHhhcccCCC
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGC--MGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~--~~~~~~~~~~~~~~e~p~ 473 (744)
|..+ +...++..|+|+++|+++.|+...+..+|.+++++++++ ...+||++.+...-+ .+.++.+++.++.|..++
T Consensus 130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 9999 999999999999999999999999999999999999999 556799977654422 222333333444463332
Q ss_pred C---CCCCChH--HHHHHHHhhccccc-ccC--CCCC--------CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 474 L---HPTISGR--ELLYIEKSLGSSVQ-VAM--PTLA--------TTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQA 537 (744)
Q Consensus 474 ~---~~~~~~~--~~~~~~~~~~~~~~-~~~--~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p 537 (744)
. ++..+.+ ..... +....... ... .+.. ...+++..+|+.+....+-+.+...+++-+.+|..
T Consensus 208 sl~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q 286 (511)
T TIGR00806 208 SLFFNRLEDVRGALPCEL-DQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVH 286 (511)
T ss_pred hhhhcccccccccccccc-ccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHH
Confidence 1 1110000 00000 00000000 000 0000 01223345667776666666666777777777777
Q ss_pred HHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchHHHHH
Q psy15142 538 SYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATM 617 (744)
Q Consensus 538 ~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (744)
.......+-++.-.|..-++..+.+.+..+..|++-.++.+-. .+.+.+..++.+..++++.++++.|+..+
T Consensus 287 ~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~--------~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~ 358 (511)
T TIGR00806 287 TLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS--------KLLIAVVSAIQAGLVFWMSQSHDIWVLYV 358 (511)
T ss_pred HHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH--------HHHHHHHHHHHHHHhhhhhcccchHHHHH
Confidence 7666543322224566677777888888999998865553221 24444454555555667777777766555
Q ss_pred HHHH
Q psy15142 618 ALCL 621 (744)
Q Consensus 618 ~~~~ 621 (744)
.+.+
T Consensus 359 ~yvl 362 (511)
T TIGR00806 359 TYVL 362 (511)
T ss_pred HHHH
Confidence 4444
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-21 Score=211.60 Aligned_cols=316 Identities=9% Similarity=-0.050 Sum_probs=207.6
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.++..++..++++++|+++||+ |||+++.++.++.+++.++++++++.+.++++|++.|
T Consensus 48 ~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 117 (426)
T PRK12307 48 LGLTDMEGAFLATAAFIGRPFGGALFGLLADKF----------GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVG 117 (426)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34443 349999999999999999999999999 7888999999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh---hHh-hhh-hhchh-h
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA---TKE-GLE-KFNIE-R 274 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~-~~~~~-~ 274 (744)
++.|...+....++.|+.|+ +|+++.|+.+.+..+|.++++.+.....+...+........ ... ... ..+.+ +
T Consensus 118 ~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~ 197 (426)
T PRK12307 118 MGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKE 197 (426)
T ss_pred HHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChH
Confidence 99999888888999999985 59999999999999998888654322211111111100000 000 000 00000 0
Q ss_pred ----HH--------------HHHHHHhhhhcCCCcceehh--hhhhcccccchhhheeeecccccccccCchhhHHHHHH
Q psy15142 275 ----EV--------------ATYIKQYFENAYGPYWQCVV--GRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSS 334 (744)
Q Consensus 275 ----~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 334 (744)
+. ....++.++++ ..+.... ...+..+........+...+ .++.|.+..+.+.+.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~ 274 (426)
T PRK12307 198 WEEAKLSGKGKHSQSAWSVFSLSMKGLFNRA--QFPLTLCVFIVLFSIFGANWPIFGLLPTY-LAGEGFDTGVVSNLMTA 274 (426)
T ss_pred HHHhhhhccccccccchhhhhHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 00 00111222111 1111111 11111111111111111111 23458888888988899
Q ss_pred HHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC-hHHHHHHHHHHhhhhhhhhhHHhHHhhhccCcc
Q psy15142 335 FFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN-PGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPL 413 (744)
Q Consensus 335 ~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~ 413 (744)
..++..++.++.|+++||+|||+.+..+.++.++..++. .....+ ...+.+..+..+++..+..+..+.++.|.+|++
T Consensus 275 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 353 (426)
T PRK12307 275 AAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPL-FRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE 353 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH
Confidence 999999999999999999999999988887766655442 112222 222222222222233334456678889999999
Q ss_pred chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHH
Q psy15142 414 ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYF 452 (744)
Q Consensus 414 ~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~ 452 (744)
.||+++|+.+....+|+.++|.+.+++.+++|+....++
T Consensus 354 ~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 354 VRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 999999999999999999999999999998886554333
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=213.70 Aligned_cols=333 Identities=14% Similarity=-0.012 Sum_probs=205.6
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCC------hhHHHHHHHHHHH
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS------EVTATMALCLGVA 202 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 202 (744)
.+++.+...++..++++++|+++||+ |||+.+.+++++.+++.++++++.+ .+.++++|++.|+
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~----------Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 127 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKL----------GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGV 127 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh----------ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHH
Confidence 38999999999999999999999999 7888888898888888888888765 6788899999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC----cc-----------------cchhhHHHhH
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK----ST-----------------MDADMQQKAI 260 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~----~~-----------------~~~~~~~~~~ 260 (744)
+.|+..+...++++|+.|+ +||+.+++.+....+|.++++.+.... .. ...+.|+...
T Consensus 128 ~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~ 207 (502)
T TIGR00887 128 GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILI 207 (502)
T ss_pred HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHH
Confidence 9999999999999999985 699999999998888877765432211 00 0000111100
Q ss_pred -----------------------------h--hhHhhhhhhch-----h-hH----------HHHHHHHhhhhcC-CCcc
Q psy15142 261 -----------------------------D--ATKEGLEKFNI-----E-RE----------VATYIKQYFENAY-GPYW 292 (744)
Q Consensus 261 -----------------------------~--~~~~~~~~~~~-----~-~~----------~~~~~~~~~~~~~-~~~~ 292 (744)
+ ...+.+.+... + ++ ....+++.+++.. ++.+
T Consensus 208 ~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 287 (502)
T TIGR00887 208 GFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHG 287 (502)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHH
Confidence 0 00000000000 0 00 0011222222111 1111
Q ss_pred eehhh---hhhcccccchhhheeeecccccccccCchhhHH------------HHHHHHHHHHHhhhhhHHhhhccCCch
Q psy15142 293 QCVVG---RNFGSYVSFETHYIYFYLGKVKHINWTVAQESA------------VDSSFFWGYLITQVPGGFFASRYPANR 357 (744)
Q Consensus 293 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~Dr~Grr~ 357 (744)
+..+. ..+.....++....+.. ...++.|++....+. ...+..++..++.+++++++||+|||+
T Consensus 288 ~~~~~~~~~~~~~~~~~y~~~~~~p-~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~ 366 (502)
T TIGR00887 288 KHLLGTAGSWFLLDIAFYGVNLNQK-VILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP 366 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccccccH-HHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Confidence 11111 11111111111111111 112345554432111 123344556667788999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc--ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHH
Q psy15142 358 IFGTAIACTSFLHLFVPTAIKL--NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLP 435 (744)
Q Consensus 358 ~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~ 435 (744)
+++.+.++.+++.+++...... +...+....++..++..+..+..+.+.+|.+|++.|+++.|+.+..+.+|.+++|.
T Consensus 367 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~ 446 (502)
T TIGR00887 367 IQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 9988887777666553221111 11111111111222223345667888999999999999999999999999999999
Q ss_pred HHHHhhhc----------cCchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 436 ISAILTEH----------FSWEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 436 i~~~l~~~----------~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
+.+.+.+. .++...|++.++++++..+.. ++.||+..
T Consensus 447 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 447 GFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred HhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 99988873 345567777777776665554 45587643
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-19 Score=198.14 Aligned_cols=243 Identities=15% Similarity=0.090 Sum_probs=189.8
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-HhhcChHHHHHHHHHHhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-AIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~~~~ 396 (744)
++++|++..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.++... ...++++.+++.|++.|+|.+
T Consensus 30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g 109 (410)
T TIGR00885 30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG 109 (410)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence 6789999999999999999999999999999999999999999999999988876321 224578889999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc--------------------------cCchhHH
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH--------------------------FSWEAMF 450 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~--------------------------~gw~~~f 450 (744)
...+..+.++.+..|+++|++.+++.+....+|..++|.+++.+... .+||++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~f 189 (410)
T TIGR00885 110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPY 189 (410)
T ss_pred HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999877422 3699999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHH
Q psy15142 451 YFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFY 530 (744)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 530 (744)
++.+++.++..++..+. +. |+.+. ++++ +.....+.++++++|.++..++..++......
T Consensus 190 l~~a~~~~~~~~~~~~~-~~-p~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~ 249 (410)
T TIGR00885 190 MIIGAVVLAVALLIMLT-KM-PALNH--SDAK----------------QISFSASLSRLARIRHYREGVIAQFFYVGVQI 249 (410)
T ss_pred HHHHHHHHHHHHHHHHh-cC-CCCCc--cccc----------------cccchhhHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 98888776654443322 21 11100 0000 00011234577889988887888888777777
Q ss_pred HHHHHHHHHHHHhc-CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 531 LLVLFQASYLKSTF-HLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 531 ~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
....+++.|.++.. +.+...++...+.......+|+++++++.||+++|+
T Consensus 250 ~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~ 300 (410)
T TIGR00885 250 MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK 300 (410)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 88889999987632 344444455666667888999999999999998873
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >KOG2504|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-20 Score=204.90 Aligned_cols=347 Identities=15% Similarity=0.165 Sum_probs=258.7
Q ss_pred Ccceehhhhhhcccccchhhheee--ecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHH
Q psy15142 290 PYWQCVVGRNFGSYVSFETHYIYF--YLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTS 367 (744)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~ 367 (744)
..|.++++.++.....+.....+- .....++++.+.++++|+.++......+..++.+.+.||+|.|.+.++|.++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 357777776666665555433332 222357889888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcChHHHHH-HHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 368 FLHLFVPTAIKLNPGSVII-VRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~-~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
++.++ ..++++.+.+++ .-++.|+|.+..+.....++..+|+ ++|+.+.|+...+..+|.++-|.+.-.+.+.+||
T Consensus 123 ~g~~l--ssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~ 199 (509)
T KOG2504|consen 123 LGLLL--SSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW 199 (509)
T ss_pred HHHHH--HHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc
Confidence 99998 788889877655 5678999999999989999998875 8999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHH----------------HHHh-------------hccccccc
Q psy15142 447 EAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLY----------------IEKS-------------LGSSVQVA 497 (744)
Q Consensus 447 ~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~----------------~~~~-------------~~~~~~~~ 497 (744)
|+.+++.+.+.+-+++....+.|..++..+. ..++.+. ..+. ..+.....
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKW 278 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccc
Confidence 9999999999877777777776633332111 0000000 0000 00000000
Q ss_pred C-CCCCCCc---HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy15142 498 M-PTLATTP---WREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLA 573 (744)
Q Consensus 498 ~-~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~ 573 (744)
. ...+... ..++++++.++.+.+...+...+++....++|.|..+ .|++..+++.+.++.++..++++++.|++.
T Consensus 279 ~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~la 357 (509)
T KOG2504|consen 279 RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLA 357 (509)
T ss_pred cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhc
Confidence 0 0001111 2588999999999999999999999999999999995 799999999999999999999999999999
Q ss_pred HHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchHH-HHHHHHHHhh----------------------------
Q psy15142 574 DHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVT-ATMALCLGIE---------------------------- 624 (744)
Q Consensus 574 dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------------------- 624 (744)
|+...++ +.+..++++..+++.+......+.+. ...+..+++.
T Consensus 358 D~~~~~~--------~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~ 429 (509)
T KOG2504|consen 358 DKPGIRA--------LVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLL 429 (509)
T ss_pred Cccccch--------HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHH
Confidence 9988543 45666666666666555555544422 2222222222
Q ss_pred ----------------------hhhHHHHHHHHHHHHHHHHHhhhhc
Q psy15142 625 ----------------------GRWTVVFLIAATVHFIGITFYAIFA 649 (744)
Q Consensus 625 ----------------------~~~~~~f~~~a~~~~~~~~~~~~~~ 649 (744)
++|...|++++.+.+++.+++++..
T Consensus 430 l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 430 LLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 5688899999999999888877763
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=210.29 Aligned_cols=333 Identities=12% Similarity=0.011 Sum_probs=207.5
Q ss_pred ccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc----CChhHHHHHHH
Q psy15142 124 QFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT----KSEVTATMALC 198 (744)
Q Consensus 124 ~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 198 (744)
+.+.. .|++.++..++..++++++|+++||+ |||+++++++++.+++.++++++ .+.+.++++|+
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~----------g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS----------NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF 128 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc----------CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 55543 49999999999999999999999999 67778888888888888888765 36777888899
Q ss_pred HHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhh-HHHhhhccCCcccchhhHHHhH----hhh-----Hhhh
Q psy15142 199 LGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDI-FISYIGRRGKSTMDADMQQKAI----DAT-----KEGL 267 (744)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~ 267 (744)
+.|++.|...+.....+.|+.|+ +||+.+|+++.+.++|+ +.+++..........+...... ... ....
T Consensus 129 l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 129 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMM 208 (452)
T ss_pred HHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999998877777778888875 69999999999988875 4455432111111111110000 000 0000
Q ss_pred hhhch------hhH--------------HHHHHHHhhh---hcCCCcceehhhhhhcccccchhhheeeecccccccccC
Q psy15142 268 EKFNI------ERE--------------VATYIKQYFE---NAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT 324 (744)
Q Consensus 268 ~~~~~------~~~--------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 324 (744)
.+.+. +++ .....++.+. .+.+..|...+..++... ..+....+.+.+..+..|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~P~~l~~~~g~s 287 (452)
T PRK11273 209 RDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYL-LRYGILDWSPTYLKEVKHFA 287 (452)
T ss_pred cCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCC
Confidence 00000 000 0000111110 111222222222222221 11222222233334557888
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhcc--CCchhhH-HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhH
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRY--PANRIFG-TAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~--Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
..+.+++..++.++..++.+++|+++||+ |||+... ....+..++.+........+....++..++.|.+.......
T Consensus 288 ~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 367 (452)
T PRK11273 288 LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVML 367 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHH
Confidence 88889888888999999999999999999 5554322 22222223222210111233444444445555543333334
Q ss_pred HhHHhhhccCccchhHHHHHHHHHhhhHHHh-hHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 402 VHGIWRFWAPPLERSRLATIAFCGTYAGIVL-GLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 402 ~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~i-g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
...+..|.+|++.||++.|+.+....+|+.+ +|.+.|.+.++.||+..|++.++.+++.++....+
T Consensus 368 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 368 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 4567789999999999999999888888655 79999999999999999998888777766655544
|
|
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.4e-21 Score=204.73 Aligned_cols=303 Identities=14% Similarity=0.085 Sum_probs=216.4
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC-----ChhHHHHHHHHHHH
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK-----SEVTATMALCLGVA 202 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 202 (744)
+.|++.++..++..++.++.|+++||+ |||++++++.++.+++.++.+++. +.+.+++.|++.|+
T Consensus 35 ~~g~~~~~~~~~~~i~~~~~G~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 104 (365)
T TIGR00900 35 VLSLAALAGMLPYVVLSPIAGALADRY----------DRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAI 104 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhh----------chhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 449999999999999999999999999 677788888887777777777766 88999999999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH---hhh-----Hhhh--hhhc
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI---DAT-----KEGL--EKFN 271 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~--~~~~ 271 (744)
+.+...+...+++.|+.|+ +|++..|+.+.+..+|.++++.+.........+...... ... .... ++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (365)
T TIGR00900 105 AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELA 184 (365)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 9999999999999999985 699999999999999998887654332221111110000 000 0000 0000
Q ss_pred h-h-h----HH----HHHHHHhhhhcCCCcceehhhhhhcccccchhhh-eeeecccccccccCchhhHHHHHHHHHHHH
Q psy15142 272 I-E-R----EV----ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHY-IYFYLGKVKHINWTVAQESAVDSSFFWGYL 340 (744)
Q Consensus 272 ~-~-~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 340 (744)
. + + +. .+..+..++ .+..+..... .+.......... .....+..+.+|.+..+.+++.+...++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (365)
T TIGR00900 185 ASEIQALSNAVLRDTREGIKFVLK--NPLLRTLLLL-ALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGAL 261 (365)
T ss_pred CccccccchhHHHHHHhHHHHHHc--CcHHHHHHHH-HHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 0 0 0 00 111111111 1112222111 111111111111 111222234478888999999999999999
Q ss_pred HhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHH
Q psy15142 341 ITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL-NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLA 419 (744)
Q Consensus 341 ~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~ 419 (744)
++.++.+++.||+|||+.+..+.++.+++.++ ....+ +.+.+++..++.|++.+...+...+++.|.+|++.|+++.
T Consensus 262 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (365)
T TIGR00900 262 LGALLLGLLGRYFKRMALMTGAIFVIGLAILV--VGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVF 339 (365)
T ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH--HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999998887777766665 34444 3777778889999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHhhHHHHHHhhhccC
Q psy15142 420 TIAFCGTYAGIVLGLPISAILTEHFS 445 (744)
Q Consensus 420 g~~~~~~~~g~~ig~~i~~~l~~~~g 445 (744)
|+.+....+|..++|.++|.+.+++|
T Consensus 340 ~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 340 GAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999988654
|
|
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=209.36 Aligned_cols=320 Identities=11% Similarity=0.053 Sum_probs=215.3
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHH-HHHHHHHhhhcc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATM-ALCLGVAFSGFA 207 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~ 207 (744)
.|++.++.+++..++.+++|+++||+ |||+.+++++++.+++.++++++++.+.+.+ .|++.|++.+..
T Consensus 56 ~~~~~s~~~~~~~~~~~~~G~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~ 125 (455)
T TIGR00892 56 TAWISSIMLAVLYAGGPISSILVNRF----------GCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFN 125 (455)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHc----------CchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhh
Confidence 49999999999999999999999999 6777888898888999999999988887765 468889988876
Q ss_pred cccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh---hh----H-hhhhhh-------ch
Q psy15142 208 ISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID---AT----K-EGLEKF-------NI 272 (744)
Q Consensus 208 ~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~----~-~~~~~~-------~~ 272 (744)
.+...+++.++.|++||++.|+.+.+..+|..+++.+.........+.+..... .. . ...... ..
T Consensus 126 ~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 205 (455)
T TIGR00892 126 FQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKS 205 (455)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Confidence 666667778888888999999999999998877755332221111111100000 00 0 000000 00
Q ss_pred --------h---hH-----HHHHHHHhh--h-hcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHH
Q psy15142 273 --------E---RE-----VATYIKQYF--E-NAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDS 333 (744)
Q Consensus 273 --------~---~~-----~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 333 (744)
+ ++ ..+...+.. + .+.+..+......++ ....+.....+...+ .+++|++..+.+++.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~ 283 (455)
T TIGR00892 206 KSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVI-MFLGFFAPIIFLVPY-AKDKGVDEYEAAFLLS 283 (455)
T ss_pred cccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHH-HHHHccchHHHHHHH-HHHcCCCHHHHHHHHH
Confidence 0 00 000000000 0 011112222221111 111111111111111 2457889999999999
Q ss_pred HHHHHHHHhhhhhHHhhhcc--CCchhhHHHH--HHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhc
Q psy15142 334 SFFWGYLITQVPGGFFASRY--PANRIFGTAI--ACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFW 409 (744)
Q Consensus 334 ~~~~~~~~~~~~~g~l~Dr~--Grr~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~ 409 (744)
+..++..++++++|+++||. ++|+...++. ++.+++.++ ....++.+.+++.+++.|++.+...+...+++.|.
T Consensus 284 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll--~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~ 361 (455)
T TIGR00892 284 IIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL--CALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDL 361 (455)
T ss_pred HHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH--HHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 99999999999999999984 3444443333 333333333 34566788888889999999999999999999999
Q ss_pred cCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHHH
Q psy15142 410 APPLERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWYL 462 (744)
Q Consensus 410 ~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~ 462 (744)
+|++++++++|+++....+|..+||.++|.+.+.. +|+..|++.+++.++..+
T Consensus 362 ~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 362 VGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999877 599999988887665544
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-19 Score=195.45 Aligned_cols=223 Identities=17% Similarity=0.244 Sum_probs=174.1
Q ss_pred HHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChH--------HHHHHHHHHhhhhhhhhhHHhHHhhh
Q psy15142 337 WGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPG--------SVIIVRICQGLVEGVCYPAVHGIWRF 408 (744)
Q Consensus 337 ~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~e 408 (744)
++..+++++.|+++||+|||+++..+.++.+++.++ .++++++. .+++.|+++|++.+...+...++++|
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL--IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH--HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 334568899999999999999999999999988877 56666654 47889999999999999999999999
Q ss_pred ccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh--------hccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCh
Q psy15142 409 WAPPLERSRLATIAFCGTYAGIVLGLPISAILT--------EHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISG 480 (744)
Q Consensus 409 ~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~ 480 (744)
++|+++|++..++...+..+|..+++.+++.+. +.++||+.|++.+++.++..++. ...+|+++..+
T Consensus 124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---- 198 (394)
T TIGR00883 124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLR-RNLEETPVFEK---- 198 (394)
T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHH----
Confidence 999999999999999999999999998876653 35789999988776655543332 23344432110
Q ss_pred HHHHHHHHhhcccccccCCCCCCCcHHHHhhcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHH
Q psy15142 481 RELLYIEKSLGSSVQVAMPTLATTPWREFAHSMP--VYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLP 558 (744)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 558 (744)
+. . ..+....++++.+++++ ++...+..++.....+....+.|.|+++.+|.+..+.+....+.
T Consensus 199 -~~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 264 (394)
T TIGR00883 199 -AQ----E---------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLS 264 (394)
T ss_pred -HH----h---------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHH
Confidence 00 0 00111334666777655 66666677777777788888999999877899999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhhhcC
Q psy15142 559 HLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 559 ~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.++..++.++.|+++||+++|+
T Consensus 265 ~~~~~~~~~~~g~l~dr~g~~~ 286 (394)
T TIGR00883 265 LILFFITIPLSGALSDRIGRRP 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHhchHH
Confidence 9999999999999999999874
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-20 Score=208.26 Aligned_cols=321 Identities=11% Similarity=-0.034 Sum_probs=214.0
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
.|++.++++++..+|++++|+++||+ |||++++++.++.+++.++.+++++++.++++|++.|++.+...
T Consensus 129 ~~~~~s~~~~g~~~g~~~~g~l~Dr~----------Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 198 (505)
T TIGR00898 129 VDLTQSCFFVGVLLGSFVFGYLSDRF----------GRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIW 198 (505)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhc----------cchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchH
Confidence 49999999999999999999999999 78888889999999999999999999999999999999999999
Q ss_pred ccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc------------------------cchhhHHHh-Hhh
Q psy15142 209 SGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST------------------------MDADMQQKA-IDA 262 (744)
Q Consensus 209 ~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~------------------------~~~~~~~~~-~~~ 262 (744)
+...+++.|+.|+ +|+++.++.+.+..+|.++++.+...... .+.+..... .+.
T Consensus 199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~ 278 (505)
T TIGR00898 199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEE 278 (505)
T ss_pred HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHH
Confidence 9999999999985 69999999988888888777665433221 000000000 000
Q ss_pred hHhhhhhhch------hhHH-----HH---------HHHHhhhhcCCCcceehhhhhhcccccchhhheeeec-cccccc
Q psy15142 263 TKEGLEKFNI------EREV-----AT---------YIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYL-GKVKHI 321 (744)
Q Consensus 263 ~~~~~~~~~~------~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 321 (744)
..+.+++... ..+. .+ ..++.+++ ++.+...+...+..+.. ...++.+ .....+
T Consensus 279 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 353 (505)
T TIGR00898 279 ALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRT--PNLRKTTLCLMMLWFTT---AFSYYGLVLDLGNL 353 (505)
T ss_pred HHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCC--hHHHHHHHHHHHHHHHH---HHHHHHHhcccccc
Confidence 0000000000 0000 00 00111110 01111111111111111 1111111 112333
Q ss_pred ccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcCh--HHHHHHHHHHhhhhhhhh
Q psy15142 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNP--GSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 322 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~~~~~ 399 (744)
+.+. .+...+..+..+++.++.++++||+|||+++.++.++.+++.++ ..+.++. +..++..++.+++.+..+
T Consensus 354 ~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (505)
T TIGR00898 354 GGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLL--LLFVPVDLYFLRTALAVLGKFGITSAF 428 (505)
T ss_pred CCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--HHHcCCCchHHHHHHHHHHHHHHHHHH
Confidence 4332 23334455667778888999999999999999998888877766 3343332 444555566677777778
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
+..+.+.+|.+|++.|++++|+.+....+|.+++|++.+ + ...++...+++.++..++..++.+++ ||+.
T Consensus 429 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~ 498 (505)
T TIGR00898 429 QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFL-PETK 498 (505)
T ss_pred HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcC-cCCC
Confidence 889999999999999999999999999999999999998 4 34466777777777777776665544 7764
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=206.28 Aligned_cols=314 Identities=12% Similarity=0.016 Sum_probs=207.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChh--------HHHHHHHHHHHhhh
Q psy15142 134 SLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV--------TATMALCLGVAFSG 205 (744)
Q Consensus 134 ~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g 205 (744)
++.+++..+++++.|+++||+ |||+++++++++.+++.++++++++.+ .+++.|++.|++.+
T Consensus 42 ~~~~~~~~i~~~~~G~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 111 (394)
T TIGR00883 42 AAGFLARPLGAIVFGHFGDRI----------GRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLG 111 (394)
T ss_pred HHHHHHhhhHHHHhhhhhhhh----------hhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhcc
Confidence 455666678999999999999 777888899999999999999988864 36778999999999
Q ss_pred cccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc-c-----chhhHHHhHhh-----hH-----hhhh
Q psy15142 206 FAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST-M-----DADMQQKAIDA-----TK-----EGLE 268 (744)
Q Consensus 206 ~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~-~-----~~~~~~~~~~~-----~~-----~~~~ 268 (744)
...+...+++.|..|+ +||+..++.+.+..+|.++++.+...... . ....++..... .. ...+
T Consensus 112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 191 (394)
T TIGR00883 112 GEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLE 191 (394)
T ss_pred ccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 9888899999999975 69999999999999988887654321110 0 00011111000 00 0000
Q ss_pred hhchhhHH-------HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHH
Q psy15142 269 KFNIEREV-------ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLI 341 (744)
Q Consensus 269 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~ 341 (744)
+.+..++. ....++.++++. +.+.......+...........+...+..+++|.+..+.+.+.+...++..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 270 (394)
T TIGR00883 192 ETPVFEKAQEKHKKKRGPIRETLTKHR-KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFI 270 (394)
T ss_pred CChhHHHHHhccccccCCHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHH
Confidence 00000000 001111221111 1122222222222111211111222223456788888899999999999999
Q ss_pred hhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh--hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHH
Q psy15142 342 TQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI--KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLA 419 (744)
Q Consensus 342 ~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~ 419 (744)
+.++.|+++||+|||+.+..+..+..+..+...... ..+.+.+++..++.|++.+...+...+++.|.+|++.|+++.
T Consensus 271 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~ 350 (394)
T TIGR00883 271 TIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGA 350 (394)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEe
Confidence 999999999999999987765554443331110112 245566667778888888888899999999999999999999
Q ss_pred HHH-HHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHH
Q psy15142 420 TIA-FCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGL 458 (744)
Q Consensus 420 g~~-~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~ 458 (744)
++. +....+|..++|.++|.+.++.| |+..++..++.++
T Consensus 351 ~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 351 SLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred eehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 985 46667899999999999999888 8877666554443
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=206.50 Aligned_cols=325 Identities=7% Similarity=-0.070 Sum_probs=206.3
Q ss_pred hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 121 AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
..++.+.. .|++.++++++..+++++.|+++||+ |||+++.+++++.+++.+++++++|++++++.|++
T Consensus 36 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----------G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 105 (412)
T TIGR02332 36 KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII----------GARRWIAGIMVLWGIASTATMFATGPESLYLLRIL 105 (412)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh----------ChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 33444443 39999999999999999999999999 77778899999999999999999999999999999
Q ss_pred HHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCccc----chhhHHHhHhh------h----H
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTM----DADMQQKAIDA------T----K 264 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~------~----~ 264 (744)
.|++.+...+....+++|+.|+ +||+.+|+++.+..+|.++++.+....... ....++..... . .
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 9999999888888889999985 699999999999999888876643222110 00011111000 0 0
Q ss_pred -hhhhhhchh-----hHHHHHH-------------------------HHhhhhcCCCcceehhhhhhcccccchhhheee
Q psy15142 265 -EGLEKFNIE-----REVATYI-------------------------KQYFENAYGPYWQCVVGRNFGSYVSFETHYIYF 313 (744)
Q Consensus 265 -~~~~~~~~~-----~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (744)
...++.+.+ ++..+.. +..++.-..+..+......+...........+.
T Consensus 186 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
T TIGR02332 186 WFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWT 265 (412)
T ss_pred hhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0000000 000000000111111111111111111111122
Q ss_pred eccccc-ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhh-HHHHHHHHHHHHHHHHHhhcChHHHHHHHHHH
Q psy15142 314 YLGKVK-HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIF-GTAIACTSFLHLFVPTAIKLNPGSVIIVRICQ 391 (744)
Q Consensus 314 ~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (744)
+....+ ..+.+..+.+++.+...++..++.+.+|+++||++||+.. ....++.+++.++ .....+....+++.++.
T Consensus 266 p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 343 (412)
T TIGR02332 266 PQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL--ASATDHNLIQLLGIIMA 343 (412)
T ss_pred HHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Confidence 222223 3466777888899999999999999999999999987753 3333344433322 11222222222222233
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHH
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMG 457 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~ 457 (744)
+++.....+.......|.+|+++|+++.|+.+...++|++++|.+.|.+.+..| |+..+++.++..
T Consensus 344 ~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 344 SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 333333344455666788999999999999999999999999999999998775 998888766543
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=211.66 Aligned_cols=328 Identities=8% Similarity=-0.066 Sum_probs=216.1
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .|++.++.++++.++.+++|+++||+ |||+.++++.++.+++.++++++++.+.+++.|++.|
T Consensus 50 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (496)
T PRK03893 50 FGLTTVQAASLISAAFISRWFGGLLLGAMGDRY----------GRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIG 119 (496)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 444443 49999999999999999999999999 7788888999989999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh---hhHh--hhhhhch---
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID---ATKE--GLEKFNI--- 272 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~--- 272 (744)
++.+...+...+++.|..|+ +|++..|+.+...++|.++++.+.........+....... .... .....+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~ 199 (496)
T PRK03893 120 MGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAED 199 (496)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 99998888888899999985 6999999999999999888876443222211111110000 0000 0000000
Q ss_pred ---h---hHHHHHHHHh-h-----------------------hhc-------------------------CCCcceehhh
Q psy15142 273 ---E---REVATYIKQY-F-----------------------ENA-------------------------YGPYWQCVVG 297 (744)
Q Consensus 273 ---~---~~~~~~~~~~-~-----------------------~~~-------------------------~~~~~~~~~~ 297 (744)
+ +.......+. . ... ..+++.....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (496)
T PRK03893 200 WKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVM 279 (496)
T ss_pred hhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 0 0000000000 0 000 0000000000
Q ss_pred hh---hcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH
Q psy15142 298 RN---FGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP 374 (744)
Q Consensus 298 ~~---~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~ 374 (744)
.. +..+........+...+..+++|++..+.+++.+.+.++..++.+++|+++||+|||+++..+.++.++..++..
T Consensus 280 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 359 (496)
T PRK03893 280 LMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVF 359 (496)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 00 000000000001112222357889999999999999999999999999999999999998887766665554321
Q ss_pred HHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHH
Q psy15142 375 TAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYG 454 (744)
Q Consensus 375 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~ 454 (744)
.....+.+.+.+..++.++...+..+...+++.|.+|+++||+++|+.+....+|..+||+++|.+.+.+||+..+...+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 360 AIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLS 439 (496)
T ss_pred hccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 11122333333444444444344456677889999999999999999999999999999999999999999998876655
Q ss_pred HHHHHH
Q psy15142 455 CMGLLW 460 (744)
Q Consensus 455 ~~~~~~ 460 (744)
....+.
T Consensus 440 ~~~~~~ 445 (496)
T PRK03893 440 FSLTFV 445 (496)
T ss_pred HHHHHH
Confidence 544333
|
|
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-18 Score=192.17 Aligned_cols=240 Identities=14% Similarity=0.118 Sum_probs=179.4
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-----CCchh-hHHHHHHHHHHHHHHHHHhh---cChHHHHHHHH
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY-----PANRI-FGTAIACTSFLHLFVPTAIK---LNPGSVIIVRI 389 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-----Grr~~-l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 389 (744)
++.|.+.++++.+ +.....+ ++.+++|+++||+ ||||. +..+.+..+++... .++. .+++.+.+.++
T Consensus 40 ~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~--~a~~~~~~~l~~l~~~~~ 115 (491)
T PRK11010 40 TVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAA--MGFLEPGTQLRWLAALAV 115 (491)
T ss_pred HhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHH--HHHcCCcchHHHHHHHHH
Confidence 4557888888886 3333333 5789999999999 99986 55666666666555 3333 46777888899
Q ss_pred HHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-ccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 390 CQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-HFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 390 l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
+.+++.+...+...++..|++|+++|+++.++...+..+|.++++.+++.+.+ ..|||..|++.+++.++..+..++ .
T Consensus 116 l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~ 194 (491)
T PRK11010 116 VIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-A 194 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-c
Confidence 99999999999999999999999999999999999999999999999999988 579999999998887766555444 4
Q ss_pred ccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q psy15142 469 FEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQI 548 (744)
Q Consensus 469 ~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 548 (744)
||+++..+. +++. . +....+++++++++..|...+..++...+......+.+.|+.+..|++.
T Consensus 195 ~e~~~~~~~--~~~~---~------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~ 257 (491)
T PRK11010 195 PEPTDTIPV--PKTL---E------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDA 257 (491)
T ss_pred CCCcccccc--ccch---h------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 665432110 0000 0 0001246677777777766555555556666666778888776689999
Q ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 549 QETGFIGS-LPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 549 ~~~~~~~~-~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+.+.+.. ...++.+++.+++|+++||+++|+
T Consensus 258 ~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~ 290 (491)
T PRK11010 258 GEVGLVNKTLGLLATIVGALYGGILMQRLSLFR 290 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999874 556789999999999999999874
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-20 Score=201.65 Aligned_cols=325 Identities=11% Similarity=-0.042 Sum_probs=222.9
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .|+..++..++..+++++.|+++||+ |||+.+++++++.+++.++++++++.++++++|++.|
T Consensus 50 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~----------grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 50 LGISEGVAGQSVTVTAFVAMFASLFITQTIQAT----------DRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------CcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 344443 49999999999999999999999999 7888999999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh---h---Hhhhhhhc---
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA---T---KEGLEKFN--- 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~--- 271 (744)
++.|...+...+++.|+.|+ +|+++.|+...+.++|.++++.+.....+...+........ . .-.....+
T Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999889999999999985 69999999999999998888775543332222211110000 0 00000000
Q ss_pred hhh-HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhh
Q psy15142 272 IER-EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFA 350 (744)
Q Consensus 272 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 350 (744)
.++ ...+...+.++ .+..|...+. .+..+........+......+++|++..+.+.+...+.++..++.++.+++.
T Consensus 200 ~~~~~~~~~~~~~l~--~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~ 276 (394)
T PRK10213 200 GEPSHQKQNTFRLLQ--RPGVMAGMIA-IFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFIL 276 (394)
T ss_pred cccccchhHHHHHhc--CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00111112221 1112222111 1111111111111111112356788988899999999999999999999999
Q ss_pred hccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHH
Q psy15142 351 SRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGI 430 (744)
Q Consensus 351 Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~ 430 (744)
||.+ |+.+..+.++..+..+++ ....++.+.+.+..++.|++.+...+...+++.+..| +++++..++.....++|.
T Consensus 277 ~r~~-~~~l~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~ 353 (394)
T PRK10213 277 KRSV-KLALAGAPLVLAVSALVL-TLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLAN 353 (394)
T ss_pred hccc-hhHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHH
Confidence 9964 444444444433332221 2344566677778888999998888988989998887 567788888888889999
Q ss_pred HhhHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q psy15142 431 VLGLPISAILTEHFSWEAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 431 ~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 463 (744)
.+|+.++|.+.+..|++..+...+++.++..+.
T Consensus 354 ~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 354 TCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 999999999999999988888877665554433
|
|
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=200.97 Aligned_cols=329 Identities=8% Similarity=-0.070 Sum_probs=217.0
Q ss_pred hhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.+|.+.. .|++.++..++..++++++|+++||+ |||+++.++.++.+++.++++++++++++++.|++.
T Consensus 32 ~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~ 101 (382)
T PRK10091 32 DVGISIPAAGHMISYYALGVVVGAPIIALFSSRY----------SLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVS 101 (382)
T ss_pred HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC----------ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3455543 49999999999999999999999999 788889999999999999999999999999999999
Q ss_pred HHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhh---------Hhhhhhh
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDAT---------KEGLEKF 270 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 270 (744)
|++.|...+...+++.|+.|+ +|++.+|+...+..+|..+++.+.........+......... .....+.
T Consensus 102 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 102 GFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998777777888898875 699999999998888888876543322221111111000000 0000110
Q ss_pred ch--hhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHH
Q psy15142 271 NI--EREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGF 348 (744)
Q Consensus 271 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 348 (744)
+. +.+..+..+ .+ +..+.|.......+. .........+......+.+|+++.+.+++.+...++..++.++.|+
T Consensus 182 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~ 257 (382)
T PRK10091 182 RDEAKGGLREQFH-FL--RSPAPWLIFAATMFG-NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGR 257 (382)
T ss_pred CcccccCHHHHHH-Hh--cChHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHhe
Confidence 00 001111111 11 111122222111111 1111111111111223457889999999999999999999999999
Q ss_pred hhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHh-HHhhhccCccchhHHHHHHHHHhh
Q psy15142 349 FASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVH-GIWRFWAPPLERSRLATIAFCGTY 427 (744)
Q Consensus 349 l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~-~~~~e~~p~~~Rg~~~g~~~~~~~ 427 (744)
+.||+|+|+.+..+.++.+++.++. ....++.+..++..++.+++..+..+... ....+..|++.++.+ ..+....
T Consensus 258 l~~r~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 334 (382)
T PRK10091 258 LSGRYSPLRIAAVTDFIIVLALLML-FFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFN 334 (382)
T ss_pred eccccCchhHHHHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHH
Confidence 9999999999998888777776553 22344445555555666666554444333 344454455555544 3466788
Q ss_pred hHHHhhHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 428 AGIVLGLPISAILTEH-FSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 428 ~g~~ig~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
+|..+||.++|.+.+. .+|+..+.+.+++.++.......+
T Consensus 335 ~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 335 LGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 689999998877776665544444
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-18 Score=186.49 Aligned_cols=240 Identities=11% Similarity=-0.002 Sum_probs=177.5
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-----CCch-hhHHHHHHHHHHHHHHHHHhh---cChHHHHHHHH
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY-----PANR-IFGTAIACTSFLHLFVPTAIK---LNPGSVIIVRI 389 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-----Grr~-~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 389 (744)
++.|+|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++... .++. .+.+.+++..+
T Consensus 27 ~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~--l~~~~~~~~~~~l~~~~~ 102 (402)
T PRK11902 27 TVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA--MAFCPPHAALWPLAGLAV 102 (402)
T ss_pred HHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH--HHhcCccchHHHHHHHHH
Confidence 4569999999999776665 58889999999999 8876 677777777766665 3343 34666777777
Q ss_pred HHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 390 CQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-FSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 390 l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
+.+++.+...+...+++.|++|+++|+++.++...+..+|..+++.+++.+.+. +|||..|++.+++.++..+.. +..
T Consensus 103 ~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~ 181 (402)
T PRK11902 103 LVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWA 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 788888888899999999999999999999999999999999999999988885 599999999888776655443 444
Q ss_pred ccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q psy15142 469 FEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQI 548 (744)
Q Consensus 469 ~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 548 (744)
||++++.+.. ++..+. ....+++++++|.++..++..++..........+.+.++.+.+|+++
T Consensus 182 ~e~~~~~~~~-~~~~~~----------------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~ 244 (402)
T PRK11902 182 PEPEVPARPP-RSLGEA----------------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSA 244 (402)
T ss_pred CCCccccccc-chhHHH----------------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCH
Confidence 6654321110 000000 11246778899988876666555554433333445555666689999
Q ss_pred hhHHHHHHHHH-HHHHHHHHHHHHHhHHhhhcC
Q psy15142 549 QETGFIGSLPH-LLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 549 ~~~~~~~~~~~-~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+.+++....+ ++.+++.++++++.||+++|+
T Consensus 245 ~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~ 277 (402)
T PRK11902 245 GEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR 277 (402)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99998876554 457899999999999999874
|
|
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-20 Score=205.25 Aligned_cols=301 Identities=12% Similarity=-0.024 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChh--------HHHHHHHHHHHhhhccc
Q psy15142 137 HLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV--------TATMALCLGVAFSGFAI 208 (744)
Q Consensus 137 ~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~ 208 (744)
+++..+|+++.|+++||+ |||+.++.++++.+++.++++++++.+ .++++|++.|++.|...
T Consensus 66 ~l~~~ig~~~~G~l~Dr~----------Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 135 (434)
T PRK15075 66 FLMRPLGAIVLGAYIDRV----------GRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVEL 135 (434)
T ss_pred HHHhhhHHHHHHHHhhhh----------chHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccH
Confidence 445568899999999999 788899999999999999999998876 35778999999999988
Q ss_pred ccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC----cc--cchhhHHHhHhh-----h-Hhhhh-hhchhh
Q psy15142 209 SGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK----ST--MDADMQQKAIDA-----T-KEGLE-KFNIER 274 (744)
Q Consensus 209 ~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~----~~--~~~~~~~~~~~~-----~-~~~~~-~~~~~~ 274 (744)
+...++++|+.|+ +||+.+++.+...++|..+++.+.... .. .....|+..... . ..... ..++++
T Consensus 136 ~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~ 215 (434)
T PRK15075 136 GGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETE 215 (434)
T ss_pred HHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 8888999999985 699999998887777665554322211 10 011111111100 0 00000 000000
Q ss_pred H---H--HHHHHHhhhh--cCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhH
Q psy15142 275 E---V--ATYIKQYFEN--AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGG 347 (744)
Q Consensus 275 ~---~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 347 (744)
+ . +...++.++. +.++.+...+...+.....+.....+...+..+.+|++..+.+++..++.++..++.+++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 295 (434)
T PRK15075 216 EFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGG 295 (434)
T ss_pred HHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0000010100 1111111111111111111111111122222445788888888888888899999999999
Q ss_pred HhhhccCCchhhHHHHHHHHHHHHHH-H-HHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHH
Q psy15142 348 FFASRYPANRIFGTAIACTSFLHLFV-P-TAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG 425 (744)
Q Consensus 348 ~l~Dr~Grr~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~ 425 (744)
+++||+|||++++.+.++.++...+. . ....++...+.+..++.+++.+...+....++.|.+|++.|+++.++.+..
T Consensus 296 ~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~ 375 (434)
T PRK15075 296 ALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSL 375 (434)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHH
Confidence 99999999999877655443322111 0 111233333444455566777777777778999999999999999997654
Q ss_pred hh-hHHHhhHHHHHHhhhccCch
Q psy15142 426 TY-AGIVLGLPISAILTEHFSWE 447 (744)
Q Consensus 426 ~~-~g~~ig~~i~~~l~~~~gw~ 447 (744)
.. +++.++|.+.+++.++.|++
T Consensus 376 ~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 376 ATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHhhhHHHHHHHHHHhcCCc
Confidence 44 46788999999999988864
|
|
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=199.31 Aligned_cols=250 Identities=10% Similarity=0.002 Sum_probs=162.4
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHhhc-----ChHHHHHHHH
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAIKL-----NPGSVIIVRI 389 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~ 389 (744)
+..+++|+++.+.|++.+++.++..++++++|+++||+|||+++.++..+.+++..... ..... .....++.++
T Consensus 36 ~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (420)
T PRK09528 36 WLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGI 115 (420)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999999999999999999877665554432210 11111 0111222333
Q ss_pred HHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcc
Q psy15142 390 CQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSF 469 (744)
Q Consensus 390 l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 469 (744)
+.|.+.....+....+..+. .++++...|.......+|..++|++++.+.+ .+|+..|++.++++++..++.++..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 116 YLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccc
Confidence 33433333333344443322 2456778888888999999999999998876 48999999888887776666555544
Q ss_pred cCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy15142 470 EKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTF---HL 546 (744)
Q Consensus 470 e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~ 546 (744)
+.+++.. ..+++ .. +.+.......+..+|+|.++.+.+..+.....+.....+.|.|+.+.+ +.
T Consensus 193 ~~~~~~~-~~~~~--------~~----~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
T PRK09528 193 DAPSTAK-VANAL--------GA----NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQ 259 (420)
T ss_pred cccchhh-hccch--------hc----ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 4322111 00000 00 000011123456778888776555544444445555556777766532 45
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCc
Q psy15142 547 QIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGI 581 (744)
Q Consensus 547 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~ 581 (744)
+..+.+.+.++..+...++.+++|++.||+++|+.
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA 294 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence 55677888888888899999999999999999863
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=203.72 Aligned_cols=336 Identities=11% Similarity=-0.026 Sum_probs=223.6
Q ss_pred ccccchhhhhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChh
Q psy15142 113 GMKCNLGFAKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV 191 (744)
Q Consensus 113 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~ 191 (744)
+++.++. ..++++. +.|++.+++.++..+++++.|+++||+ |||++++++.++.+++.++.+++++.+
T Consensus 29 ~l~~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~----------g~k~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
T PRK10054 29 FMTIYLS-RQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF----------DKKRYMLLAITAFASGFIAIPLVNNVT 97 (395)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CcchhHHHHHHHHHHHHHHHHHHhHHH
Confidence 3444443 4456665 349999999999999999999999999 677788888888888888888999988
Q ss_pred HHHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHH---HhHhhh----
Q psy15142 192 TATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQ---KAIDAT---- 263 (744)
Q Consensus 192 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~---- 263 (744)
.+++++++.+.+.+...+...++..|..|+ +|++..|+.+...++|.++++.+....... .+... ......
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~-g~~~~f~~~~~~~~i~~i 176 (395)
T PRK10054 98 LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ-SINLPFWLAAICSAFPLV 176 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcHHHHHHHHHHHHHH
Confidence 888888888877776677778888898875 699999999999999988886643322211 11000 000000
Q ss_pred -H-hhhhhhchh-h-HHHHH--HHHhhhhcCCCcceehhhhhhcccccchh-hheeeecccccccccCchhhHHHHHHHH
Q psy15142 264 -K-EGLEKFNIE-R-EVATY--IKQYFENAYGPYWQCVVGRNFGSYVSFET-HYIYFYLGKVKHINWTVAQESAVDSSFF 336 (744)
Q Consensus 264 -~-~~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 336 (744)
. ....+.+.+ + +..+. .++.+ +.++.+...+...+........ .+...+.....+.+.+....+++.+.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 254 (395)
T PRK10054 177 FIQIWVQRSEKAIATETGSVWSPSVLL--QDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNA 254 (395)
T ss_pred HHHHHHhccccccccchhhhhhhhhhc--cCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhh
Confidence 0 001111100 0 00000 11111 1122222222212111111100 1111111111344556666777777777
Q ss_pred HHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh-cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccch
Q psy15142 337 WGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK-LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLER 415 (744)
Q Consensus 337 ~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~R 415 (744)
+.....+++.|++.||+++|+.+..+.++.+++.+. .... ++.+.+++..++.|+|.+...|...+++.+..|++.|
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~ 332 (395)
T PRK10054 255 AMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVG--FIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMK 332 (395)
T ss_pred hheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHH--HHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccc
Confidence 777777788999999999999999888877777765 3333 4566667778899999888888889999999999999
Q ss_pred hHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 416 SRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 416 g~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
+++.+..+ ...+|..+||.++|.+.++.|....|++.++..++..++.+
T Consensus 333 ~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 333 ASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred eehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 99988655 56689999999999999999988888877666555544443
|
|
| >KOG0254|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=204.83 Aligned_cols=250 Identities=16% Similarity=0.114 Sum_probs=193.2
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHH
Q psy15142 326 AQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGI 405 (744)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 405 (744)
.+.+++.+++.++..++++++|+++|++|||+.++++.+++.++.++ .+.+.|..+++++|++.|+|.|+...+...|
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii--~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAII--IALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 35589999999999999999999999999999999999999999999 7888899999999999999999999999999
Q ss_pred hhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC-hHHH
Q psy15142 406 WRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-FSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTIS-GREL 483 (744)
Q Consensus 406 ~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~-~~~~ 483 (744)
++|..|++.||...+..+....+|..++..++....+. ++||..+.+..+.+++..+. .++.||+|++.-... .++.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 99999999999999999999999999995555444332 48999999999998888777 667799998743321 2222
Q ss_pred HHHHHhhcc-c-ccc--------------cCCCCCCCcHHHHhh----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15142 484 LYIEKSLGS-S-VQV--------------AMPTLATTPWREFAH----SMPVYAIIVANFCRSWNFYLLVLFQASYLKST 543 (744)
Q Consensus 484 ~~~~~~~~~-~-~~~--------------~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 543 (744)
+.....+.. . .+. .........+.++++ ++.++.+.+..+++..+.+.+.+|.+.+++.
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~- 324 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS- 324 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence 222222111 0 000 000001112444443 3455677888888889999999999999987
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 544 FHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 544 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.|.+... .....+.++...++.+++.++.||+|||+
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ 360 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRK 360 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4766443 55566778888899999999999999985
|
|
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-18 Score=185.73 Aligned_cols=241 Identities=13% Similarity=0.059 Sum_probs=181.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-----CCchhh-HHHHHHHHHHHHHHHHHhh---cChHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY-----PANRIF-GTAIACTSFLHLFVPTAIK---LNPGSVIIVR 388 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-----Grr~~l-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 388 (744)
.++.|+|.++.+++..+ .+...+ .+++|+++||+ ||||.+ +.+.++.++..+. .++. .+.+.+....
T Consensus 15 ~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~--l~~~~~~~~l~~l~~~~ 90 (356)
T TIGR00901 15 LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI--LSFLVPSTDLPLLAGLA 90 (356)
T ss_pred HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH--HHcCCcchhHHHHHHHH
Confidence 46789999999998655 444444 88999999998 899975 5566666666545 3344 3455566667
Q ss_pred HHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC--------chhHHHHHHHHHHHH
Q psy15142 389 ICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS--------WEAMFYFYGCMGLLW 460 (744)
Q Consensus 389 ~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g--------w~~~f~~~~~~~~~~ 460 (744)
++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|++.+++.++.
T Consensus 91 ~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~ 170 (356)
T TIGR00901 91 FLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPG 170 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHH
Confidence 778888888889999999999999999999999999999999999999999988888 999999998877776
Q ss_pred HHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHH---HHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 461 YLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMP---VYAIIVANFCRSWNFYLLVLFQA 537 (744)
Q Consensus 461 ~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~p 537 (744)
.+..++..||+++..+ ..+++... ....++++++++. ++...+..++.....+....+.|
T Consensus 171 ~~~~~~~~~e~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (356)
T TIGR00901 171 LLVTLFLAKEPQEDAS-VPKPLTQA----------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTT 233 (356)
T ss_pred HHHHHHhccCCCcccc-cchhHHHH----------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555545565422111 11111000 0123556677664 66666666777778888889999
Q ss_pred HHHHHhcCCChhhHHHHHHHHH-HHHHHHHHHHHHHhHHhhhcC
Q psy15142 538 SYLKSTFHLQIQETGFIGSLPH-LLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 538 ~~l~~~~g~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.|+++ +|+++.+.+.+....+ +..+++.+++|++.||+++|+
T Consensus 234 ~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 276 (356)
T TIGR00901 234 LFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY 276 (356)
T ss_pred HHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 99988 8999999988877665 567899999999999999874
|
|
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-18 Score=189.46 Aligned_cols=240 Identities=11% Similarity=-0.021 Sum_probs=183.1
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHH-HHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIAC-TSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
.+++|+|.+++|++.+++.+...++++++|.++||+||+........+ .++..+.. ...+++++.+++.|+++|.+.+
T Consensus 31 l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~l~~~~~~ 109 (382)
T TIGR00902 31 LKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAF-SAGAHNAWLLFIAIGLFALFFS 109 (382)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999985443222211 11111111 3456789999999999999988
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
...|...++..++ .++|++..|.......+|.+++|++++.+.+++|||..|++.++..++. ++.+.+ ++++++.+
T Consensus 110 ~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~-~~~~~~-~~~~~~~~ 185 (382)
T TIGR00902 110 AGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM-LIGFLI-KPTIPPKD 185 (382)
T ss_pred cchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHHHc-CCCCCCCc
Confidence 8889888887765 4788999999999999999999999999999999999998876553332 233333 33321111
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
.. ++ .........++++|+|+++...+..++...+...+..+.|.|+++ .|.++.+.+.+..
T Consensus 186 ~~--~~---------------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~ 247 (382)
T TIGR00902 186 AI--PE---------------DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWG 247 (382)
T ss_pred cc--cc---------------cccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHH
Confidence 00 00 000012246788999999988888888888888889999999987 7999999999988
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+..+..+++.++.+++.||++.|+
T Consensus 248 ~~~~~~i~~~~~~~~l~~r~g~~~ 271 (382)
T TIGR00902 248 IGVLAEIIIFAFSNKLFQNCSARD 271 (382)
T ss_pred HHHHHHHHHHHHhHHHHhhCCHHH
Confidence 888888999999999999999874
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6e-20 Score=200.93 Aligned_cols=331 Identities=10% Similarity=0.002 Sum_probs=204.0
Q ss_pred hhhccccc-ccccccchHH-HHHHHHHHHHHHHHHHHHhCCcccchhhhh-HHhhhhhHHHHHHHHHHhcCChhHHHHHH
Q psy15142 121 AKLQFEGR-TGFIGSLPHL-LMTIVVPCGGMLADHLRKKGILSTTMVRKL-FNCGGFGMEAFFFVVVAYTKSEVTATMAL 197 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~-~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (744)
..++.+.. .|++.+...+ +..++.+++|+ +||++ ||+ +++.+.++.++..++.+++++++++++++
T Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g----------~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (393)
T PRK15011 44 DEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRG----------DRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVG 112 (393)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc----------chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455443 3888766555 55555555555 99994 443 45556666667777778888888776655
Q ss_pred HHHHHhhhcccccccccccccCcc-hh--hHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh------hH---h
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAPR-YA--SILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA------TK---E 265 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p~-~r--g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~ 265 (744)
.+.+...+...+...++..|..|+ +| +...++.+.+.++|.++++.+.....+...+........ .. .
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 113 VFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 444444445566677777776653 24 455678888888888888765443322111111100000 00 0
Q ss_pred hhhhhchhhHH-HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhh
Q psy15142 266 GLEKFNIEREV-ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQV 344 (744)
Q Consensus 266 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 344 (744)
...+...+++. .... +..+ +.++.+...+...+..+............+..+++|+++.+.+++.+...++.+++.+
T Consensus 193 ~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~ 270 (393)
T PRK15011 193 FLPSMRKELPLATGTL-EAPR-RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTML 270 (393)
T ss_pred hcCccCCCCccccccc-cccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00110000000 0000 0111 1111111111111111111111111122233466888988999888877777888899
Q ss_pred hhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHH
Q psy15142 345 PGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFC 424 (744)
Q Consensus 345 ~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~ 424 (744)
++|+++||+|||+.+..+.+...+.... ....++.+.+++.+++.+++.+...+....+..|.+|+ +|+++.++++.
T Consensus 271 ~~G~l~dr~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~ 347 (393)
T PRK15011 271 IAGYFAKRLGKRFLMRVAAVAGVCFYAG--MLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTN 347 (393)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHH
Confidence 9999999999999887776655544433 33456677777788888887777777778888999985 69999999999
Q ss_pred HhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 425 GTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 425 ~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
..++|..++|.++|.+.+++||+..|++.+++.++.+++.++.
T Consensus 348 ~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 348 TSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999998887777766555544
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.7e-20 Score=205.17 Aligned_cols=329 Identities=12% Similarity=0.007 Sum_probs=201.5
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.++.++++.++.+++|+++||+ |||+++.++.++.+++.++++++++.+.++++|++.|
T Consensus 66 ~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~----------G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 66 LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY----------GPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34443 348888999999999999999999999 7777888888888999998999999998889999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC----cc--c-chhhHHHhHhh------h----
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK----ST--M-DADMQQKAIDA------T---- 263 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~----~~--~-~~~~~~~~~~~------~---- 263 (744)
++.+... ....+++|+.|+ +||+++|+.+...++|+.+++.+.... .. . +...++..... .
T Consensus 136 ~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 136 FSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred HHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHH
Confidence 8887643 344567899985 699999999877777666553322110 00 0 00011111100 0
Q ss_pred Hhhh-hhhchh--hHH-------HHHHHHhhhh--cCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHH
Q psy15142 264 KEGL-EKFNIE--REV-------ATYIKQYFEN--AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAV 331 (744)
Q Consensus 264 ~~~~-~~~~~~--~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 331 (744)
.... ++.+.. ++. .....+.+.. +.++.|...+.. +..+........+...+..+++|++..+.+.+
T Consensus 215 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~ 293 (476)
T PLN00028 215 VLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTY-GYSFGVELTMDNIIAEYFYDRFGLSLETAGAI 293 (476)
T ss_pred HHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHH-HHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHH
Confidence 0000 000000 000 0000011111 112223322221 11111111111111122245679999999999
Q ss_pred HHHHHHHHHHhhhhhHHhhhccCCch-------hhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhH
Q psy15142 332 DSSFFWGYLITQVPGGFFASRYPANR-------IFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHG 404 (744)
Q Consensus 332 ~~~~~~~~~~~~~~~g~l~Dr~Grr~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 404 (744)
.+++.++..++.+++|+++||+|||+ .+.+..++.+++.++ .....+.+..++..++.+++.+...+...+
T Consensus 294 ~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (476)
T PLN00028 294 AASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIW--LGRANSLGAAIVVMILFSIFVQAACGATFG 371 (476)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHH--hcccchHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999998762 222222222232233 233444454455556666666666666677
Q ss_pred HhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 405 IWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 405 ~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
++.+..| +.||.+.|+.+.+..+|+.++|.+.+ ..+..+|+..|++.+++.++..++.++.
T Consensus 372 ~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 372 IVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred cCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 7777654 78999999998877788877776654 2234469999998888777776665544
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-19 Score=220.09 Aligned_cols=244 Identities=16% Similarity=0.120 Sum_probs=184.3
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHhhcChHHHHHHHHHHhhhhhhhhhHHhH
Q psy15142 326 AQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAIKLNPGSVIIVRICQGLVEGVCYPAVHG 404 (744)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 404 (744)
...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. .....+++.++++|++.|++.+...++..+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 4568889999999999999999999999999999988776555554421 234567889999999999999999999999
Q ss_pred HhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc--------c-CchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 405 IWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH--------F-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 405 ~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~--------~-gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
+++|++|+++|++++|+...+..+|.++|+++++++.+. + +|.+.+.+.++..++..++..+..|+.+...
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAA 206 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCC
Confidence 999999999999999999999999999999999998875 2 3444444444333333333334446665432
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh-hHHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQ-ETGFI 554 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-~~~~~ 554 (744)
.....++.. .........++.+++++.++..++..++.......+..++|.|+++.+|++.. ..+++
T Consensus 207 ~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~ 274 (1146)
T PRK08633 207 PEVFDKKKY------------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYL 274 (1146)
T ss_pred ccccccccc------------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHH
Confidence 211000000 00000112356677888888777777777777777788899999888899988 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhcCc
Q psy15142 555 GSLPHLLMTIVVPCGGMLADHLRKKGI 581 (744)
Q Consensus 555 ~~~~~~~~~i~~~~~g~l~dr~g~r~~ 581 (744)
.++..++.+++.++.+++.||+++++.
T Consensus 275 ~~~~~ig~~~g~~~~g~l~~r~~~~~~ 301 (1146)
T PRK08633 275 LAASAIGIGIGSLLAGRLSGRHIELGL 301 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEccc
Confidence 999999999999999999999987753
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=195.47 Aligned_cols=329 Identities=9% Similarity=0.009 Sum_probs=213.6
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHH---hc-CChhHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA---YT-KSEVTATMAL 197 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~ 197 (744)
++.+. +.|++.+++.++..++++++|+++||+ |||+++..+..+.+++.+++. +. .+++.+++.|
T Consensus 43 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~----------g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (402)
T TIGR00897 43 LGLSPQQSASAFTLYGIAAAISAWISGVVAEII----------GPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY 112 (402)
T ss_pred hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 45554 449999999999999999999999999 777788888888777765543 33 4677778889
Q ss_pred HHHHHhhhcccccccccccccCc-chhhHHHHHHhhhhhhhh-HHHhhhc-cCCcccch--hhHHHhHhhh----H-hh-
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDI-FISYIGR-RGKSTMDA--DMQQKAIDAT----K-EG- 266 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~-~~~~~~~-~~~~~~~~--~~~~~~~~~~----~-~~- 266 (744)
++.|++.+...+...+.+.+..| ++||+++|+.+++.++|. ++++.+. ........ ..+....... . ..
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 99999888776666677778776 579999999999999886 5666543 22222211 1111110000 0 00
Q ss_pred hhhh--ch---h-hHH---HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHH
Q psy15142 267 LEKF--NI---E-REV---ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFW 337 (744)
Q Consensus 267 ~~~~--~~---~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 337 (744)
..+. +. + .+. .+..+..+ +.++.|...+..++ ..........+.+.+ .+++|++..+.+++.+...+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~ 268 (402)
T TIGR00897 193 NKDIFTPQHMQTREKFSELGKAATILF--TNPNVLLGGMVRII-NTIGLFGFAVFLPMF-VAELGFSTSEWLQIWGTFFF 268 (402)
T ss_pred cCCCCCcccccCCcchhhHHHHHHHHH--cChhHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHcCCChhHHHHHHHHHHH
Confidence 0000 00 0 000 01111111 12222222222211 111111111111222 24578888888998889999
Q ss_pred HHHHhhhhhHHhhhccCCchhhH-HHHHHHHHHHHHHHHH---hhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCcc
Q psy15142 338 GYLITQVPGGFFASRYPANRIFG-TAIACTSFLHLFVPTA---IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPL 413 (744)
Q Consensus 338 ~~~~~~~~~g~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~ 413 (744)
+..++.+..|+++||+|||+.+. .+.+..+++.+.+... ..++.+.+++..++.|++.+...+ ....+.|..| +
T Consensus 269 ~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~ 346 (402)
T TIGR00897 269 TNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-K 346 (402)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-c
Confidence 99999999999999999988764 3333333332221111 123555666778888888777655 4456677655 6
Q ss_pred chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 414 ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 414 ~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
+||++.|+.+....+|..++|.+++.+.+..||...+++.+++.++..++.++.
T Consensus 347 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 347 HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999988887776666554
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-18 Score=188.30 Aligned_cols=260 Identities=9% Similarity=-0.025 Sum_probs=190.0
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCc----hhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPAN----RIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGL 393 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 393 (744)
.+++|.|..+.|++.+++.++..++++++|+++||+||| +.+.++.++. .+.. ....++++.+++.|++.|+
T Consensus 31 l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~l~i~~~l~g~ 106 (382)
T PRK11128 31 LKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF---AVAF-WFGAHSFWLLFVAIGLFNL 106 (382)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH---HHHH-HHhcccHHHHHHHHHHHHH
Confidence 366899999999999999999999999999999999994 3322222221 1121 2345788888899999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
+.+...|...++..++ .++|+++.+.......+|..+||.+++.+.+++|||..|++.++..++..+. .++.||.++
T Consensus 107 ~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~ 183 (382)
T PRK11128 107 FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QLLRPTIMP 183 (382)
T ss_pred HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHccCCCCC
Confidence 9888888888887776 3568888888898999999999999999999999999998877654444333 333343221
Q ss_pred CCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Q psy15142 474 LHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF 553 (744)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 553 (744)
+. +++. ..+....++++++|+|.++...+..++..........+.|.|+++ .|++..+.+.
T Consensus 184 ~~----~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~ 244 (382)
T PRK11128 184 QG----ESRQ--------------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGY 244 (382)
T ss_pred cc----cccc--------------ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHH
Confidence 10 0000 000012357889999999988777777777777778888999876 7999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchH
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV 613 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (744)
+.+...+..++..++.+++.||+++|+ . ...+....++..++....++.+
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~~r~~~~~---------~-l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T PRK11128 245 LWSLGVVAEVLIFAFSNRLFRRWSARD---------L-LLLSAICGVVRWGLMGSTTALP 294 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHH---------H-HHHHHHHHHHHHHHHHhhhhHH
Confidence 988888888999999999999999874 2 3334444444444444444444
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-19 Score=218.03 Aligned_cols=238 Identities=11% Similarity=0.016 Sum_probs=183.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHH---HHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHH
Q psy15142 326 AQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIA---CTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAV 402 (744)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 402 (744)
...++..+++.+.++++++++|+++||+|||+++..... +.++..+. ....++++.++++|+++|++.+...|+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~--~~~~~s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIY--GFHLNSVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHhhchHH
Confidence 346788889999999999999999999999997643222 22222222 2334789999999999999999999999
Q ss_pred hHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHH
Q psy15142 403 HGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRE 482 (744)
Q Consensus 403 ~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 482 (744)
.+++.+++|+++|++++|+.+++..+|.++||.++|++.+..||++.|+..++..++..++. +..|+++........+.
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 208 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLAS-LFIPKTGNAAPDLKIDR 208 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH-hhCCCCCCCCCCCeecc
Confidence 99999999999999999999999999999999999999999999999855444444444433 44455433221111000
Q ss_pred HHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH
Q psy15142 483 LLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLM 562 (744)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~ 562 (744)
..... ....++.+.+++.++...+..+...+....+..++|.|+++.+|.++...+++.+...++.
T Consensus 209 -~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~ 274 (1140)
T PRK06814 209 -NIIRS-------------TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGV 274 (1140)
T ss_pred -chHHH-------------HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 00000 0124667788899998888888887888888889999999988999999999999999999
Q ss_pred HHHHHHHHHHhHHhhhcC
Q psy15142 563 TIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 563 ~i~~~~~g~l~dr~g~r~ 580 (744)
+++.++.|+++++..+++
T Consensus 275 ~ig~~~~g~l~~~~~~~~ 292 (1140)
T PRK06814 275 AVGSFLASKLSEGRITLL 292 (1140)
T ss_pred HHHHHHHHHHhCCceeee
Confidence 999999999998776654
|
|
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=190.53 Aligned_cols=247 Identities=13% Similarity=0.093 Sum_probs=175.5
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHhh-----cChHHHHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAIK-----LNPGSVIIVRICQ 391 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~l~ 391 (744)
.+++|++..+.+++.+++.++..+++++.|+++||+|||+.++.+.+..+++..... .... .....+++.+++.
T Consensus 30 ~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (396)
T TIGR00882 30 HDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYL 109 (396)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999877666554433210 1111 1223345667888
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
|++.+...+....+..+..+ +++...|.......+|..++|.+++.+.+ .+|+..|++.+++.++..++.+...|+.
T Consensus 110 g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 110 GFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88888888888888777533 34556777888889999999999988765 5999999998888877766555544443
Q ss_pred CCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCh
Q psy15142 472 PCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTF---HLQI 548 (744)
Q Consensus 472 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~s~ 548 (744)
|+++ +.+ +..+.+ ..+....+.++++++|+++..++..+.....+.....+.+.|+++.+ +.+.
T Consensus 187 ~~~~------~~~---~~~~~~----~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 253 (396)
T TIGR00882 187 PSSA------TVA---NALGAN----ASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGT 253 (396)
T ss_pred chhh------hhh---cccccc----cCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 2211 000 000000 01111235678899999887766666655666666667788887644 4455
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 549 QETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 549 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
...+.+.++..+...++.+..+++.||+++|+
T Consensus 254 ~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~ 285 (396)
T TIGR00882 254 RVFGYVTTMGELLNALIMFCAPLIINRIGAKN 285 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 66788888888888999999999999999985
|
|
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-19 Score=195.20 Aligned_cols=329 Identities=13% Similarity=0.042 Sum_probs=210.8
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
..|++. +.|++.++..++..++++++|+++||+++ ||+++.++.++.+++..+..+.++++.+.++|++.
T Consensus 32 ~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~---------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 32 TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLS---------AQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 345555 44999999999999999999999999842 35577777787888888888888888888888888
Q ss_pred HHhhhccccccccc----cc----ccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhh--HHHhH-hh----hH
Q psy15142 201 VAFSGFAISGYNVN----HL----DIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADM--QQKAI-DA----TK 264 (744)
Q Consensus 201 ~~~~g~~~~~~~~~----~~----e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~-~~----~~ 264 (744)
+++.+...+...++ .. |+..+ .|.+..|. .+..+|.+++..+.. .+.+. ..... .. ..
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~--lG~~ig~~l~g~l~~----~~~~~~f~~~~~~~~~~~~~~ 176 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT--IGFIAAMWAVSLLDI----ELSNIQLYITAGSSALLGVFA 176 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh--HHHHHHHHHHHHhcc----cchhHHHHHHHHHHHHHHHHH
Confidence 88665544433222 22 43433 35566553 233334333322211 11110 00000 00 00
Q ss_pred hhhhhhc-hh----hHHHHH----HHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccC--------chh
Q psy15142 265 EGLEKFN-IE----REVATY----IKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT--------VAQ 327 (744)
Q Consensus 265 ~~~~~~~-~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~ 327 (744)
....+.+ .+ .+..+. .++.+ +.++.+...+..++... .......+...+ .++.|.+ .+.
T Consensus 177 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~--k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~ 252 (418)
T TIGR00889 177 LTLPDIPVAKSTAKMSIKVMLGLDAFILF--KNKRMAIFFFFSMLLGA-PLQITNIFGNGF-LHEFGRNPEFADSFVVKN 252 (418)
T ss_pred hcCCCCCCCccccccCHHHHhhhhHHHHh--cCCCeeeHHHHHHHHHh-HHHHHHHhHHHH-HHHhcccccccchhhhhh
Confidence 0000100 00 000110 11111 22223333222222211 111111111111 1233333 356
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh-c---ChHHHHHHHHHHhhhhhhhhhHHh
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK-L---NPGSVIIVRICQGLVEGVCYPAVH 403 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~l~G~~~~~~~~~~~ 403 (744)
.+.+.++..++.+++.++.|+++||+|+|+++..+.++.+++..+. ... . +.+.+++.+++.|++.+...+...
T Consensus 253 ~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~--~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 253 ASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFF--AYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6888899999999999999999999999999999999888876553 332 2 234566788999999988888889
Q ss_pred HHhhhccCccchhHHHHHHH-HHhhhHHHhhHHHHHHhhhc------cCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 404 GIWRFWAPPLERSRLATIAF-CGTYAGIVLGLPISAILTEH------FSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 404 ~~~~e~~p~~~Rg~~~g~~~-~~~~~g~~ig~~i~~~l~~~------~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
.+++|++|++.|+++.|+.+ ....+|..+||+++|.+.++ +||+..|.+.+++.+++.++.+++.+|+
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999997 67889999999999999987 4699999999888888877777777765
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=202.48 Aligned_cols=314 Identities=10% Similarity=-0.002 Sum_probs=213.4
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
+|.+.. .|++.+.+.++..++.+++|+++||+ |||++++.++++.+++.++++++++.+.+++.|++.|
T Consensus 40 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 109 (471)
T PRK10504 40 LGESPLHMHMVIVSYVLTVAVMLPASGWLADRV----------GVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQG 109 (471)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------chHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 455543 38999999999999999999999999 6777888888888888888889999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh---hh------Hhhhhhh-
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID---AT------KEGLEKF- 270 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~- 270 (744)
++.+...+...+++.|..|+ +|++..|+.+...++|..+++.+.....+...+.+..... .. ....++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 110 VGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred hhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99999888889999999985 6999999999999998888866543222211211110000 00 0000000
Q ss_pred ----chhhH------------------------HHH---------------HHHHhhh-------hc--CCCcceehhhh
Q psy15142 271 ----NIERE------------------------VAT---------------YIKQYFE-------NA--YGPYWQCVVGR 298 (744)
Q Consensus 271 ----~~~~~------------------------~~~---------------~~~~~~~-------~~--~~~~~~~~~~~ 298 (744)
+.+.. ... ...+... .+ ..+.+...+..
T Consensus 190 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 269 (471)
T PRK10504 190 MQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAG 269 (471)
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHH
Confidence 00000 000 0000000 00 01112222222
Q ss_pred hhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh-
Q psy15142 299 NFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI- 377 (744)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~- 377 (744)
.+.....+.........+.+..+|.++.+.+++.....++..++.++.|+++||+|+|+++..+.++.+++.++.....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc
Confidence 2222222211111111122335688888999988888888888889999999999999999988887777765532111
Q ss_pred hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 378 KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 378 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
..+.+.+.+..++.|++.+..++....++.+.+|++.|+.+.|+.+....+|..+|+.++|.+.+..|+
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 123333445567788888888888999999999999999999999999999999999999998876665
|
|
| >KOG0254|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.1e-19 Score=198.35 Aligned_cols=340 Identities=15% Similarity=0.055 Sum_probs=229.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcccc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAIS 209 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 209 (744)
+++.++..++..+|++++|+++|++ |||..++++.+.+.++.+++++++|.+++++.|++.|+|.|+...
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~----------GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRI----------GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhh
Confidence 8999999999999999999999999 788899999999999999999999999999999999999999999
Q ss_pred cccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----------------------------
Q psy15142 210 GYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI---------------------------- 260 (744)
Q Consensus 210 ~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 260 (744)
....+++|++|+ .||...++.+....+|.+++.++.......+ ..|+...
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVY-AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG 240 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCC-ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC
Confidence 999999999996 5999999999999999988877666555431 1111000
Q ss_pred --hhhHhhhhhhch--hhHH---HHHHH-----------------HhhhhcCCCcceehhhhhhcccccchhhheeeecc
Q psy15142 261 --DATKEGLEKFNI--EREV---ATYIK-----------------QYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLG 316 (744)
Q Consensus 261 --~~~~~~~~~~~~--~~~~---~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (744)
.++...+..... +.+. ...++ +.+.+..+++....+.........+.....+|...
T Consensus 241 ~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~ 320 (513)
T KOG0254|consen 241 RLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTT 320 (513)
T ss_pred ChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHH
Confidence 001111111100 0000 00000 11111122223333444444444444444444444
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-----------ChHHHH
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL-----------NPGSVI 385 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 385 (744)
..+..|.+... .+...+..+...++..++.++.||+|||+.++.+.+.++++.+++...... ....+.
T Consensus 321 if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
T KOG0254|consen 321 IFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIV 399 (513)
T ss_pred HHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHH
Confidence 44555554333 444455566677777788999999999999999999998888774322111 112222
Q ss_pred HHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHH-HH
Q psy15142 386 IVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYL-CW 464 (744)
Q Consensus 386 ~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~-~~ 464 (744)
...+....+..+..++.+.+.+|.+|.+.|+++.++....+.+...+-......+.+..++...|...+..+.+..+ ..
T Consensus 400 ~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv 479 (513)
T KOG0254|consen 400 FLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFV 479 (513)
T ss_pred HHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Confidence 23333344445556777889999999999999999999988888877766665665554445666666666666655 56
Q ss_pred HhhcccCCCCCCCCChHHHHH
Q psy15142 465 LWLSFEKPCLHPTISGRELLY 485 (744)
Q Consensus 465 ~~~~~e~p~~~~~~~~~~~~~ 485 (744)
++++||+. ..+.+|.+.
T Consensus 480 ~~~~pETk----g~sleei~~ 496 (513)
T KOG0254|consen 480 FFFVPETK----GLTLEEINE 496 (513)
T ss_pred eEEcccCC----CCcHHHHHH
Confidence 66778773 344555544
|
|
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=194.18 Aligned_cols=314 Identities=9% Similarity=-0.080 Sum_probs=208.2
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.++..++..++.+++|+++||+ |||+.+.++.++.+++.++++++++.+.+.+.|++.|
T Consensus 35 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 104 (385)
T TIGR00710 35 LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY----------GRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQA 104 (385)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc----------CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 44544 349999999999999999999999999 7778888899999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----hhh-----Hhhhhhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI----DAT-----KEGLEKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~ 271 (744)
++.+...+...+++.|..|+ +|++..|+.+....+|..+++.+.....+...+...... ... ....++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 105 FGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred cchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999888999999999985 699999999999999888887654322221111110000 000 00001100
Q ss_pred -hh-----hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhh
Q psy15142 272 -IE-----REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVP 345 (744)
Q Consensus 272 -~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 345 (744)
.+ ++..+..++.++ .++.+...+...+. .........+......+.+|.++.+.+++.+...++..++.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 261 (385)
T TIGR00710 185 PYEARIQISTYFETFLLLLK--SKMFWGYALIYGAS-FGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFL 261 (385)
T ss_pred CCcccCCHHHHHHHHHHHHc--CchhHHHHHHHHHH-HHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 001111222221 12222222221111 1111111111122224567889999999999999999999999
Q ss_pred hHHhhhccCCchhhHHHHHHHHHHHHHHHHHh-h--cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHH
Q psy15142 346 GGFFASRYPANRIFGTAIACTSFLHLFVPTAI-K--LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIA 422 (744)
Q Consensus 346 ~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~ 422 (744)
.|++.||+|+|+.+..+.++..++.++..... . .+...++...++.|++.+...+....+..|..| ++|+++.++.
T Consensus 262 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~ 340 (385)
T TIGR00710 262 NGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALF 340 (385)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHH
Confidence 99999999999998888777766655521111 1 223344556677888888888888889899887 6899999998
Q ss_pred HHHhhhHHHhhHHHHHHhhhccCchhHH
Q psy15142 423 FCGTYAGIVLGLPISAILTEHFSWEAMF 450 (744)
Q Consensus 423 ~~~~~~g~~ig~~i~~~l~~~~gw~~~f 450 (744)
+.....++.+.+.+.+.+.+..+|...+
T Consensus 341 ~~~~~~~g~i~~~~~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 341 GTLRLVLGAIVGYLVSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHhccccChHHHHH
Confidence 8777654444444455554444444333
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >KOG3764|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=181.13 Aligned_cols=260 Identities=16% Similarity=0.037 Sum_probs=213.2
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
.+.+-+.+++|++++...+...+.+++.|.+.||+|+|-.+++|++++...+++ +++.+++++++++|.++|+|.++.
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTil--Fafg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTIL--FAFGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHH--HHHcchhHHHHHHHHHhhhhHHHH
Confidence 445667789999999999999999999999999999999999999999999998 789999999999999999999999
Q ss_pred hhHHhHHhhhccCccc-hhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 399 YPAVHGIWRFWAPPLE-RSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~-Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
.....+++++.+|.+. |++++|+...+..+|-.+||.++|.+.+..|.+.+|++.++++++-..+.++..+.+....+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~- 255 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD- 255 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc-
Confidence 9999999999999765 79999999999999999999999999999999999999999999988887777543322110
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
...+..++++++++|.++.........+.+....--.++.+..+.+..+..+.|+.+..
T Consensus 256 ---------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp 314 (464)
T KOG3764|consen 256 ---------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLP 314 (464)
T ss_pred ---------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecc
Confidence 01124568899999999877766666666666666667777777666445588888899
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccC
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 610 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 610 (744)
..+...+++.+.|.+.||+++-+ -...+.++++.+.++....+.+
T Consensus 315 ~~~~y~ig~~lfg~la~k~~~~~--------wl~~~~gl~~~G~~~~~iP~~~ 359 (464)
T KOG3764|consen 315 ASLSYAIGTNLFGKLADKYPHLR--------WLLSLGGLATVGVSSGPIPFAT 359 (464)
T ss_pred cccchhccCchHHHHHHhcCchh--------HHHHHHHHHHHHHHhchhHhhh
Confidence 99999999999999999999542 1344555555555544444443
|
|
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=199.78 Aligned_cols=337 Identities=12% Similarity=0.012 Sum_probs=202.8
Q ss_pred hhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHH---HhcCChh-HHHHH
Q psy15142 122 KLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVV---AYTKSEV-TATMA 196 (744)
Q Consensus 122 ~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~ 196 (744)
.+|++.. .|++.++..++..++++++|+++||+ |||+.++++..+.+++.... .+++... ..+..
T Consensus 40 ~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (420)
T PRK09528 40 INGLSGTDTGIIFSANSLFALLFQPLYGLISDKL----------GLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLG 109 (420)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455553 49999999999999999999999999 66666666554444333211 1111111 11122
Q ss_pred HHHHHHhhhcccccccccccccCc---chhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHH--hHhh---hHhh--
Q psy15142 197 LCLGVAFSGFAISGYNVNHLDIAP---RYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQK--AIDA---TKEG-- 266 (744)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~e~~p---~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~-- 266 (744)
..++++..+.........+.++.+ +++|+.+|..+...++|..+++.+.............. .... ....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~ 189 (420)
T PRK09528 110 AIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFF 189 (420)
T ss_pred HHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhc
Confidence 333344444333332223333333 34777888888888888777765433222111100000 0000 0000
Q ss_pred -hhhhchhh---------HHHHHHHHhhh-hcCCCcceehhhhhhcccccc-hhhheeeecc-cccccccCchhhHHHHH
Q psy15142 267 -LEKFNIER---------EVATYIKQYFE-NAYGPYWQCVVGRNFGSYVSF-ETHYIYFYLG-KVKHINWTVAQESAVDS 333 (744)
Q Consensus 267 -~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~g~s~~~~~~~~~ 333 (744)
.++.+.+. +.....++... .+.++.|...+.......... .......+.. ...+.+.+..+.+++.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 269 (420)
T PRK09528 190 AKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNS 269 (420)
T ss_pred ccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Confidence 00000000 00001111111 112222332222111111110 0011111110 01223556667889999
Q ss_pred HHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCcc
Q psy15142 334 SFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPL 413 (744)
Q Consensus 334 ~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~ 413 (744)
+..++..++.+++|+++||+|+|+.+..+.++.+++.++ ..+.++.+.+++.+++.|++.+...+....++.|.+|++
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 347 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG--SGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR 347 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH--HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 999999999999999999999999999988888887776 556778888888899999988888888889999999999
Q ss_pred chhHHHHH-HHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 414 ERSRLATI-AFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 414 ~Rg~~~g~-~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
.|++..+. ++....+|.++++.+.|++.+.+||+..|.+.+++.++..++.++..++
T Consensus 348 ~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 348 LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99988765 5677889999999999999999999999999888877766665555443
|
|
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-17 Score=183.58 Aligned_cols=258 Identities=14% Similarity=0.079 Sum_probs=187.9
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
..++|-+ ....|+.+.+.++..++.++.|+++|.||||..++.+.++..+|.++ .+.++|...++.+..+.|+|.|.
T Consensus 71 ~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv--~atA~~~~~~iag~~l~GvgaG~ 147 (599)
T PF06609_consen 71 NADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIV--CATAQNMNTFIAGMVLYGVGAGV 147 (599)
T ss_pred HHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHH--hhcCCcHHHHHHHHHHHHHhhHH
Confidence 4567743 56789999999999999999999999999999999999999999998 78899999999999999999766
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc-ccCCCC-C
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS-FEKPCL-H 475 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~-~e~p~~-~ 475 (744)
.. .....++|..|.|.|+.+.++.....-+...+++.++..+..+.+|||.|++.++...+.+++.+++. |++.++ +
T Consensus 148 ~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~ 226 (599)
T PF06609_consen 148 QE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLH 226 (599)
T ss_pred HH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhc
Confidence 65 45666899999999998888777666666667888887777677999999999888777655544332 322111 1
Q ss_pred -CCCC-hHHHHHHH-----------------Hhhccc--ccccCC------------------------CCCCCcHHHHh
Q psy15142 476 -PTIS-GRELLYIE-----------------KSLGSS--VQVAMP------------------------TLATTPWREFA 510 (744)
Q Consensus 476 -~~~~-~~~~~~~~-----------------~~~~~~--~~~~~~------------------------~~~~~~~~~l~ 510 (744)
+..+ +++..++. -..+.. .++... .+...-..+++
T Consensus 227 ~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf 306 (599)
T PF06609_consen 227 GRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLF 306 (599)
T ss_pred cccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHh
Confidence 1111 12222111 000111 111111 01222345678
Q ss_pred hc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh---hHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 511 HS-MPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQ---ETGFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 511 ~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
++ |.+...++..+...+.++....+.|+.....++-++. ..++...+..++..++.++.|.+..+++|-
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~ 379 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI 379 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch
Confidence 87 5666667777888888888888999988877776653 567777888888889999999999988765
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-19 Score=191.62 Aligned_cols=320 Identities=12% Similarity=0.001 Sum_probs=194.2
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.+ .|++.+++++++.+++++.|+++||+ |||++++.++.....+.+.....+++++++++|++.|
T Consensus 21 ~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~----------grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 21 IDVSKEELGLLAITYPAAFLALTIPSGLLLDRA----------FKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 344443 39999999999999999999999999 6666666555554444333333478999999999999
Q ss_pred HhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhh---------Hhhh-hhh
Q psy15142 202 AFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDAT---------KEGL-EKF 270 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~ 270 (744)
++.+.. ......++|..| ++||+++|+.+.+..+|.++++.+.....+...+......... .... ++.
T Consensus 91 ~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 91 LGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred hHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999864 444555578887 5799999999999999999887654433222222111100000 0001 111
Q ss_pred chh------hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhh
Q psy15142 271 NIE------REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQV 344 (744)
Q Consensus 271 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 344 (744)
+.+ ++..+.+++.+++ +..|...+..++. ...++....+...+. ++.|++.. .+...++..+...++
T Consensus 170 ~~~~~~~~~~~~~~~~~~ll~~--~~~~~~~~~~~~~-~~~~~~~~~wlp~~L-~~~g~s~~-~~~~~~l~~~~g~~g-- 242 (368)
T TIGR00903 170 FQAAEGFGFKDAVKEFGALAGR--KDLWIIGAILGFG-VALFDNLAIWLEAAL-RPAGLEDI-AGDAVALAILAGLIG-- 242 (368)
T ss_pred CCCCCCcchHHHHHHHHHHHcC--hhHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHCCCChH-HHHHHHHHHHHHHHH--
Confidence 000 0001122233322 2233333222222 222222222222222 33456543 455555544444444
Q ss_pred hhHHhhhccCCc---hhhHH-HHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHH
Q psy15142 345 PGGFFASRYPAN---RIFGT-AIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLAT 420 (744)
Q Consensus 345 ~~g~l~Dr~Grr---~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g 420 (744)
.++++||..|| +.... ..++.++.... .....+....++...+.+++....++..+++.+|.+|++.||++.|
T Consensus 243 -~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G 319 (368)
T TIGR00903 243 -VAVIPDRVARAGLRSIYIRAAALLIAAFFLA--LAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAG 319 (368)
T ss_pred -HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHH--HHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccc
Confidence 57788877543 33332 33333333333 2333444444445566677777777888899999999999999999
Q ss_pred HHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 421 IAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 421 ~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
+.+...++|+.++|++.+.+.. |....|.+.+++.++..+...
T Consensus 320 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 320 AIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887774 667788888877777666554
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.7e-19 Score=192.75 Aligned_cols=331 Identities=9% Similarity=-0.053 Sum_probs=217.6
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .++..+++.++..++.++.|+++||+ |||++++++..+.+++.++++++++.+.+++.|++.|
T Consensus 43 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 112 (406)
T PRK15402 43 FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI----------GRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQG 112 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 344433 38889999999999999999999999 7777888898888999888999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH---hhh---H---hhhhhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI---DAT---K---EGLEKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~---~---~~~~~~~ 271 (744)
++.+...+...+++.|..|+ +|++..++......++..+++.+.........+...... ... . ....+..
T Consensus 113 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 113 IGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred hHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99988777778888898875 588888988887777777776643222111111111000 000 0 0000000
Q ss_pred h---hh----HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhh
Q psy15142 272 I---ER----EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQV 344 (744)
Q Consensus 272 ~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 344 (744)
. ++ +..+..+..++ .++.+...+...+...... ...........+.+|+++.+.++......++..++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~ 269 (406)
T PRK15402 193 GRVGEKLSLKELGRDYKLVLK--NRRFVAGALALGLVSLPLL-AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNL 269 (406)
T ss_pred ccccccccHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 01111112221 1122222222211111111 1111111122456788888888887777788889999
Q ss_pred hhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh---hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHH
Q psy15142 345 PGGFFASRYPANRIFGTAIACTSFLHLFVPTAI---KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATI 421 (744)
Q Consensus 345 ~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~ 421 (744)
+.|+++||+|+|+.+.++.++.+++.++..... ..+.+.+++..++.|++.+...+......... ++++||+..++
T Consensus 270 ~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~ 348 (406)
T PRK15402 270 TLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAA 348 (406)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHH
Confidence 999999999999999888877766665532211 23455566777888998887777666655433 45899999999
Q ss_pred HHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 422 AFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 422 ~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.+....+|..+|+.+++.+.+..++....+..++..++.+++...+
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777665555555555444444333
|
|
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-17 Score=181.77 Aligned_cols=270 Identities=13% Similarity=0.091 Sum_probs=199.5
Q ss_pred cccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH-h--hcChHHHHHHHHHHhhhhhh
Q psy15142 321 INWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA-I--KLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 321 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~G~~~~~ 397 (744)
..-|+...+++..+..+...+.++++|.++||+.||++++.+-++.++..+.++.. . ..+.+.+++..++.|++.+.
T Consensus 40 lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~ 119 (524)
T PF05977_consen 40 LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAF 119 (524)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHH
Confidence 34467788999999999999999999999999999999999887766554442211 1 23677888899999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..|+..+++.|.+|+++...++++.....++..++||.++|.+...+|-.+.|.+.++..++..++...+.++. .+ +.
T Consensus 120 ~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~-~~-~~ 197 (524)
T PF05977_consen 120 FNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP-PP-SS 197 (524)
T ss_pred HHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-cc-cc
Confidence 99999999999999999999999999999999999999999999988988899888876666544444332221 11 11
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
...|. ..+. -+..++-+.++|.+..+++..++.+.....+...+|.+.++.+|.++...|++.+.
T Consensus 198 ~~~e~---~~~~------------l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~ 262 (524)
T PF05977_consen 198 LPRER---FFSA------------LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAA 262 (524)
T ss_pred cchhh---hhhh------------HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHH
Confidence 11111 1110 11234555566766655555555555555666778999988899999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchHHHHH
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATM 617 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (744)
.+++.++|.++.+++.+|+++++ ++..+.++.+++++.+.+.++.+...+
T Consensus 263 ~gvGai~Gal~~~~l~~~~~~~~----------lv~~~~~~~a~~~~~lal~~~~~~~~~ 312 (524)
T PF05977_consen 263 FGVGAILGALLLPRLRRRLSSRR----------LVLLASLLFALALLLLALSPSFWLALI 312 (524)
T ss_pred HHHHHHHHHHHHHHhhcccCcch----------hhHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 99999999999999988887763 333444455555566666665554433
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-19 Score=197.84 Aligned_cols=336 Identities=13% Similarity=0.043 Sum_probs=208.1
Q ss_pred ccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc----CChhHHHHHHH
Q psy15142 124 QFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT----KSEVTATMALC 198 (744)
Q Consensus 124 ~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 198 (744)
|.+.. .|++.+++.++..++.++.|+++||+ |||+++++++++.+++.++.++. ++.+.+.+.|+
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 126 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRS----------NPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLF 126 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhcc----------CCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHH
Confidence 56554 49999999999999999999999999 66667778888888887776654 35566777899
Q ss_pred HHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhcc-CCcccchhhHHHhH---h-hh-----Hhhh
Q psy15142 199 LGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRR-GKSTMDADMQQKAI---D-AT-----KEGL 267 (744)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~---~-~~-----~~~~ 267 (744)
+.|++.|...+....++.|+.|+ +||+++|+++++.++|+.+++.+.. .......+...... . .. ....
T Consensus 127 l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~ 206 (438)
T TIGR00712 127 LNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMM 206 (438)
T ss_pred HHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998888778888899974 6999999999999998877754321 11111111110000 0 00 0000
Q ss_pred hhhch-------h-------------hHHHHHHHHhhh---hcCCCcceehhhhhhcccccchhhheeeecccccccccC
Q psy15142 268 EKFNI-------E-------------REVATYIKQYFE---NAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT 324 (744)
Q Consensus 268 ~~~~~-------~-------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 324 (744)
++.+. + .+.....++.+. .+.+..|...+...+. +........+...+..+..|.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g~s 285 (438)
T TIGR00712 207 RDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFV-YLLRYGVLDWSPTYLKEVKHFA 285 (438)
T ss_pred cCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHH-HHHHHHHHHhHHHHHHHccCCC
Confidence 00000 0 000000011000 1111222222222221 1111122222223334557888
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHH--HHHHHHHh--hcChHHHHHHHHHHhhhhhhhhh
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFL--HLFVPTAI--KLNPGSVIIVRICQGLVEGVCYP 400 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~ 400 (744)
+.+.++..+++.++..++.+++|+++||+|+++....+..+..+. .++. ... ..+.+...+..++.|++..+...
T Consensus 286 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 364 (438)
T TIGR00712 286 LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIV-YWMNPAGNPLVDMICMIVIGFLIYGPVM 364 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHH-HHhcCCCchHHHHHHHHHHHHHHccHHH
Confidence 888999999999999999999999999997544323333222111 1110 111 12333333334445554333333
Q ss_pred HHhHHhhhccCccchhHHHHHHHHHhhhHH-HhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 401 AVHGIWRFWAPPLERSRLATIAFCGTYAGI-VLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 401 ~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~-~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
.......|.+|++.||++.|+.+....+|+ +++|.+.|.+.++.||...|++.++..++..+..+++.+|+
T Consensus 365 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 365 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334567899999999999999998888764 68999999999999999999888887777777766666664
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=194.39 Aligned_cols=326 Identities=12% Similarity=0.010 Sum_probs=217.1
Q ss_pred hhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 121 AKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 121 ~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
...+.+. +.|++.++..+...+.++++|+++||+ |||+++.++.++.+++.+++.++++++++.+.|++
T Consensus 39 ~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~----------g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 108 (400)
T PRK11646 39 DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF----------GAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCIL 108 (400)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh----------CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3445554 349999999999999999999999999 77888999999999999999999999999999999
Q ss_pred HHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHH---hHh-hh---H--hhhhh
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQK---AID-AT---K--EGLEK 269 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~-~~---~--~~~~~ 269 (744)
.|++.+...+...+++.|..|+ +||+.+|+.+...++|..+++.+....... .+.... ... .. . ....+
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~-g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 109 SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY-DFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999888888888888999875 699999999999999988887654332211 111100 000 00 0 00011
Q ss_pred hch---hhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhh
Q psy15142 270 FNI---EREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPG 346 (744)
Q Consensus 270 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 346 (744)
... .++..+.+++.++ .++.+...+. .+...........+.+.+. ++.+.++.+.+++.++..++...+..+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~ 263 (400)
T PRK11646 188 YKLSTVRTPVREGMTRVLR--DKRFVTYVLT-LTGYYMLAVQVMLMLPIMV-NDIAGSPSAVKWMYAIEACLSLTLLYPI 263 (400)
T ss_pred ccccccchhhHHHHHHHHc--CchHHHHHHH-HHHHHHHHHHHHHhhhhhH-HhhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 000 0111112222221 1222211111 1111111111111112222 3333366778888888777766666666
Q ss_pred HHhhh-ccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHH
Q psy15142 347 GFFAS-RYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG 425 (744)
Q Consensus 347 g~l~D-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~ 425 (744)
+++.| |++.++.+..+.++.+++.++ .+..++.+.+++..++.+++.+...|...+++.+..|+++||++.|+.+..
T Consensus 264 ~~~~~~r~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~ 341 (400)
T PRK11646 264 ARWSEKRFRLEHRLMAGLLIMSLSMFP--IGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLG 341 (400)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHH
Confidence 66665 567677777777777777665 455667766666777888888888888899999999999999999999999
Q ss_pred hhhHHHhhHHHHHHhhhcc---Cc-hhHHHHHHHHHHHHHHH
Q psy15142 426 TYAGIVLGLPISAILTEHF---SW-EAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~---gw-~~~f~~~~~~~~~~~~~ 463 (744)
..+|..+||.++|.+.++. +. ...++..++++++..+.
T Consensus 342 ~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 342 LALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999998864 32 34555445444444333
|
|
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=196.39 Aligned_cols=314 Identities=14% Similarity=0.050 Sum_probs=207.8
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.++.+. +.|++.++..++..++.+++|+++||+ |||+.++++.++.+++.++++++++.+.+++.|++.
T Consensus 24 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (379)
T TIGR00881 24 EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS----------NPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALN 93 (379)
T ss_pred HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh----------CCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 345554 349999999999999999999999999 677788899999999999999999999999999999
Q ss_pred HHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHh-hhccCCcccchhhHHHhH----hhhHhh-----hhh
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISY-IGRRGKSTMDADMQQKAI----DATKEG-----LEK 269 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~ 269 (744)
|++.+...+...+++.|+.|+ +|++.+|+.+.+.++|.++++ ++.........+...... ...... ..+
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred HhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCC
Confidence 999999999999999999985 699999999999999988887 332222111111110000 000000 000
Q ss_pred -h------------chh-------h-H----HHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccC
Q psy15142 270 -F------------NIE-------R-E----VATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT 324 (744)
Q Consensus 270 -~------------~~~-------~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 324 (744)
. +.+ . + .....+..+ +.+..|...+...+... .......+...+..+.+|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 250 (379)
T TIGR00881 174 SPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVL--LNKVLWYISLGYVFVYV-VRTGILDWSPLYLTQEKGFS 250 (379)
T ss_pred CccccccCccccCcccccccccccccccccchHHHHHHHH--hcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCC
Confidence 0 000 0 0 000011111 11122222222211111 11111111222234567888
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhccC-CchhhHHHHH-H-HHHHHHHHHHHh--hcChHHHHHHHHHHhhhhhhhh
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRYP-ANRIFGTAIA-C-TSFLHLFVPTAI--KLNPGSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~G-rr~~l~~~~~-~-~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~ 399 (744)
..+.+++.+.+.++..++.++.|+++||.+ ||+....... . ..++... ... ..+....++..++.|++..+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~ 328 (379)
T TIGR00881 251 KEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLV--YWLNPAANPLMDLICLFALGFLVYGPQ 328 (379)
T ss_pred HHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH--HhcCcchhHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999864 3333222111 1 1111111 111 2234445556667777666666
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHH
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMF 450 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f 450 (744)
+....+..|.+|++.|+++.|+.+....+|..++|.+.|.+.+++||++.|
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 329 MLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 667788999999999999999999999999999999999999999998754
|
|
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=195.89 Aligned_cols=305 Identities=13% Similarity=0.064 Sum_probs=205.5
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.++..++..++.+++|+++||+ |||+.+.++.++.+++.++..++++.+.+++.+++.|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 116 (398)
T TIGR00895 47 WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI----------GRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAG 116 (398)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh----------hhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHh
Confidence 34443 349999999999999999999999999 6777888888888888888889999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhH---HH-hH---------hhhHhh-
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQ---QK-AI---------DATKEG- 266 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~---------~~~~~~- 266 (744)
++.+...+...+++.|..|+ +|++.+|+.+.+..+|..+++.+.........+.. .. .. ....+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 117 LGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred cccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 99999999999999999985 69999999999999888877654321111100000 00 00 000000
Q ss_pred ---hhhhc-----------------------hhhH----HHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecc
Q psy15142 267 ---LEKFN-----------------------IERE----VATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLG 316 (744)
Q Consensus 267 ---~~~~~-----------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (744)
.++.. .++. .....+..++++..+.........+...........+. ..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 275 (398)
T TIGR00895 197 DFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWL-PK 275 (398)
T ss_pred hHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 00000 0000 00001111111111111111111111111111111111 12
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
..+++|.+..+.+++.++..++..++.++.|+++||+|||+.+.... +.++...++ .....+.+.+++..++.|++.+
T Consensus 276 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 276 LMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLL-LGAVFAVLV-GSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHH
Confidence 24567888888999999999999999999999999999995544433 333333332 2234566667778889999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHh
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAIL 440 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l 440 (744)
...+...+++.|.+|++.|+++.|+......+|..++|.++|.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999875
|
|
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-17 Score=168.38 Aligned_cols=277 Identities=14% Similarity=0.125 Sum_probs=217.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHH-HHHhhcChHHHHHHHHHHhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFV-PTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
.+.++++..+++++..+++.++.+++++.|++.+|+|+|+.++.|+.+++++..+. |.+...++..++++.++.|.|.+
T Consensus 40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~ 119 (422)
T COG0738 40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG 119 (422)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH
Confidence 57899999999999999999999999999999999999999999999999998873 22455678889999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-------------------cCchhHHHHHHHHH
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-------------------FSWEAMFYFYGCMG 457 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-------------------~gw~~~f~~~~~~~ 457 (744)
...+..+.|++...|++.-..-+.+.+.++.+|..++|++++.+..+ ..|+.+|...+...
T Consensus 120 ~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~l 199 (422)
T COG0738 120 LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLL 199 (422)
T ss_pred HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 99999999999999998889999999999999999999999987762 23777887777766
Q ss_pred HHHHHHHHhhc-ccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 458 LLWYLCWLWLS-FEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQ 536 (744)
Q Consensus 458 ~~~~~~~~~~~-~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (744)
+++.+...... |+.+...+ +..+.......+++++|.++...++.|+..........|+
T Consensus 200 vll~v~~~~~k~p~~~~~~~--------------------~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl 259 (422)
T COG0738 200 VLLAVLILLSKLPDLQVAAP--------------------SLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL 259 (422)
T ss_pred HHHHHHHHhccCCcCCcccc--------------------cccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 66555544332 21111000 0000111156789999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchHHHH
Q psy15142 537 ASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT 616 (744)
Q Consensus 537 p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (744)
+.|+.+..|.+..+++...+..+++.++|++++.++..|+...+ .+...+. ...+.++....+++.....
T Consensus 260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k---------~Laf~a~-~~ill~~~~~l~~g~v~~~ 329 (422)
T COG0738 260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK---------YLAFYAL-IAILLLLAVALIGGVVALY 329 (422)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH---------HHHHHHH-HHHHHHHHHHHhcChHHHH
Confidence 99999878999999999999999999999999999999998763 4444433 3333344444455544444
Q ss_pred HHHHHHhh
Q psy15142 617 MALCLGIE 624 (744)
Q Consensus 617 ~~~~~~~~ 624 (744)
.+++++.+
T Consensus 330 ~l~~ig~F 337 (422)
T COG0738 330 ALFLIGLF 337 (422)
T ss_pred HHHHHHHH
Confidence 44444443
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.9e-17 Score=164.53 Aligned_cols=256 Identities=13% Similarity=0.094 Sum_probs=210.9
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.|.+.+|++.++-.+...+.+++..+++.|+|.++.+..++++.+++.++ -... +...++.+..+.|.+.+.
T Consensus 39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~i--R~~~-~~~~L~~gt~l~G~gIav 115 (395)
T COG2807 39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILI--RSLG-GLPLLFLGTLLAGAGIAV 115 (395)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHH--Hhcc-cHHHHHHHHHHHHhhHHH
Confidence 5789999999999999999999999999999999999999999999999999887 3333 677788899999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
.....++++-+.|| ++-+..+|+|.....+|+.+++.+...+.++. |||....+.+.++++.+++++ |...++..
T Consensus 116 ~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~r~~~ 191 (395)
T COG2807 116 INVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQALREQA 191 (395)
T ss_pred HHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhcccccc
Confidence 99999999999998 66799999999999999999999999998877 799999999999888876654 33211100
Q ss_pred CCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 477 TISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
. ....+..+-..++|+|..|.+.+....+.+.+|....|+|.++.+ .|+|..++|.+.+
T Consensus 192 -~-------------------~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~lls 250 (395)
T COG2807 192 -A-------------------SIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLS 250 (395)
T ss_pred -c-------------------ccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHH
Confidence 0 001112234568999999999999999999999999999999998 6999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccC
Q psy15142 557 LPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 610 (744)
Q Consensus 557 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 610 (744)
...+..++.++....+.+|...++ .+.+....+..++++.+.+.+
T Consensus 251 l~~l~~~~~~ll~P~la~R~~n~r---------~~~~~~~~~~l~G~~G~~~~P 295 (395)
T COG2807 251 LMQLAQLPTALLIPLLARRSKNQR---------PLVVLALLLMLVGLVGLLLAP 295 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc---------hHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999866553 344444444444444444443
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=188.74 Aligned_cols=331 Identities=9% Similarity=-0.028 Sum_probs=203.5
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc-----CChhHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT-----KSEVTATM 195 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 195 (744)
.++++. +.|++.+++.+++.++.++.|++.||+ |.|+++.+++++.++.+++.+++ ++++.+++
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~----------G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF----------GGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 455655 449999999999999999999999999 66667778888888888888876 78999999
Q ss_pred HHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhcc-----------CCcc----cchhh-HHH
Q psy15142 196 ALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRR-----------GKST----MDADM-QQK 258 (744)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~-----------~~~~----~~~~~-~~~ 258 (744)
+|++.|++ |...+.....++++.|+ +||+++|+....+++|..++.++.. +... ..... ++.
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~ 212 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN 212 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence 99999997 66777788889999985 6999999997777776654422110 0000 00010 110
Q ss_pred -----hHhhhH----hh--hhhhchhhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchh
Q psy15142 259 -----AIDATK----EG--LEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQ 327 (744)
Q Consensus 259 -----~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 327 (744)
...... .. .++.+..+...+...+.+ +.++.|+..+.. ++.+..+.....+.+.+..+.+ +...
T Consensus 213 ~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~~~~~~vl--k~~~~Wllslly-~~tFG~fvg~s~~lp~~~~~~~--~~~~ 287 (462)
T PRK15034 213 AAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVL--QRLHLWLLSLLY-LATFGSFIGFSAGFAMLAKTQF--PDVN 287 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccccccCHHHHHHHh--CCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHc--ChHH
Confidence 000000 00 111111111011111222 223344443322 2222222211111111122333 2222
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh----cChHHHHHHHHHHhhhhhhhhhHHh
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK----LNPGSVIIVRICQGLVEGVCYPAVH 403 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~~~~~~~~~~~ 403 (744)
......+..+...+..+++|+++||+|+|+++.++.++++++......... .+++.+.+..+...++.|.......
T Consensus 288 ~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvf 367 (462)
T PRK15034 288 ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTF 367 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHH
Confidence 222234456667888899999999999999999988877666543212221 2344444444444444454555566
Q ss_pred HHhhhccCc---------------------cchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHH
Q psy15142 404 GIWRFWAPP---------------------LERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWY 461 (744)
Q Consensus 404 ~~~~e~~p~---------------------~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~ 461 (744)
.++..++|+ ++-|.+.|+....+.+|+.+.|.+.+...+.. ++...|+...+..+++.
T Consensus 368 k~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 447 (462)
T PRK15034 368 QMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCV 447 (462)
T ss_pred HhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 667777764 14578889999999999999998877777654 47788888888888877
Q ss_pred HHHHhhc
Q psy15142 462 LCWLWLS 468 (744)
Q Consensus 462 ~~~~~~~ 468 (744)
++.+++.
T Consensus 448 ~~~w~~y 454 (462)
T PRK15034 448 LLTWLVY 454 (462)
T ss_pred HHHHHHh
Confidence 7766553
|
|
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-19 Score=192.24 Aligned_cols=324 Identities=9% Similarity=-0.072 Sum_probs=220.5
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .|++.++..++..++++++|.++||++|+. ..|+.+.++..++.+ ..+.++++++.+++.|++.+
T Consensus 34 ~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~------~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~ 105 (382)
T TIGR00902 34 IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHII------IALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFA 105 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHH
Confidence 455553 499999999999999999999999995533 122233233322222 24446788998989999888
Q ss_pred HhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh---h----hHhh-hhhhchh
Q psy15142 202 AFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID---A----TKEG-LEKFNIE 273 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~-~~~~~~~ 273 (744)
.+.+...+...++..|. +++|++..|.....+++|.++++.+.....+..++....... . .... .++.+.+
T Consensus 106 ~~~~~~~p~~~al~~~~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 184 (382)
T TIGR00902 106 LFFSAGMPIGDALANTW-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIGFLIKPTIPPK 184 (382)
T ss_pred HHHccchhHHHHHHHHH-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88877777777776554 467899999999999999988876433322211111100000 0 0000 0100000
Q ss_pred h----HH---HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhh
Q psy15142 274 R----EV---ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPG 346 (744)
Q Consensus 274 ~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 346 (744)
+ +. .+...+.++ .++.|...+..++ ........+.+...+. +++|.+..+.|.+.++..++.+++.++.
T Consensus 185 ~~~~~~~~~~~~~~~~~l~--~~~~~~~l~~~~l-~~~~~~~~~~~~~~~l-~~~g~s~~~~g~l~~~~~~~~i~~~~~~ 260 (382)
T TIGR00902 185 DAIPEDESQGDSAFIALLK--NPMNLRFLAAVCL-IQGAHAAYYGFSAIYW-QAAGISASATGLLWGIGVLAEIIIFAFS 260 (382)
T ss_pred ccccccccccchhHHHHHc--ChHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 011122221 2222333222222 1222222222222222 4589999999999999999999999999
Q ss_pred HHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHH-HH
Q psy15142 347 GFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAF-CG 425 (744)
Q Consensus 347 g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~-~~ 425 (744)
+++.||+|+|+++.++.++.++...+ .++.++.+.+++..++.|+..+...+....++.+. |++.|+++.++++ ..
T Consensus 261 ~~l~~r~g~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~ 337 (382)
T TIGR00902 261 NKLFQNCSARDLLLISAIACVGRWAI--IGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALA 337 (382)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHH--HHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHH
Confidence 99999999999999999999988877 56788889899999999999999999999999998 9999999999987 56
Q ss_pred hhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q psy15142 426 TYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 463 (744)
..+|..+++.++|.+.+++|+ ..|++.+++.++..++
T Consensus 338 ~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 338 MGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 789999999999999999986 6677777766655433
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.5e-19 Score=218.97 Aligned_cols=316 Identities=14% Similarity=0.077 Sum_probs=216.6
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHH---HHhcCChhHHHHHHHHHHHhhh
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVV---VAYTKSEVTATMALCLGVAFSG 205 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g 205 (744)
.|++.++++++..++++++|+++||+ |||+++++++++..++.++ +.+++++++++++|++.|++.+
T Consensus 49 ~~~~~~~~~l~~~l~~~~~G~l~Dr~----------grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 118 (1146)
T PRK08633 49 TAIVNALFLLPFLLLSSPAGFLADKF----------SKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSA 118 (1146)
T ss_pred HHHHHHHHHHHHHHHhhhHhhhcccc----------cHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 38888999999999999999999999 6777777776554444433 3345788899999999999999
Q ss_pred cccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCccc---------chhhHHHhH---hhh-H-----hh
Q psy15142 206 FAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTM---------DADMQQKAI---DAT-K-----EG 266 (744)
Q Consensus 206 ~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~---~~~-~-----~~ 266 (744)
+..+...+++.|+.|+ +|++++|+.+.+.++|.++++.+....... ..+.+.... ... . ..
T Consensus 119 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1146)
T PRK08633 119 IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYR 198 (1146)
T ss_pred hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999985 699999999999999988887654332221 111111000 000 0 00
Q ss_pred hhhhc---hh----------hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCch-hhHHHH
Q psy15142 267 LEKFN---IE----------REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVA-QESAVD 332 (744)
Q Consensus 267 ~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~ 332 (744)
..+.. .. ......++..++ .+..+...+...+.... ......+...+..+.+|++.. ..+++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~g~~~ 275 (1146)
T PRK08633 199 LPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRS--DRVLWLAIIGLSYFWFI-SQLAQANFPAYAKEVLGLDNTFQVQYLL 275 (1146)
T ss_pred CcCCCCCCcccccccccccHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCCCcHHHHHHHH
Confidence 00000 00 000111111221 11122222222221111 111111222233466888888 899999
Q ss_pred HHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCc
Q psy15142 333 SSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPP 412 (744)
Q Consensus 333 ~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~ 412 (744)
++..++.+++++++|+++||+++++++.++.++.+++.++ .....+.+.++++.++.|++.+...+...+++.+.+|+
T Consensus 276 ~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 353 (1146)
T PRK08633 276 AASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFL--LPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE 353 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc
Confidence 9999999999999999999999999988888877777766 44556777777888899999998888899999999999
Q ss_pred cchhHHHHHHHHHhhhHHHhhHHHHHHhhh-ccCchhHHHHHHHHHHH
Q psy15142 413 LERSRLATIAFCGTYAGIVLGLPISAILTE-HFSWEAMFYFYGCMGLL 459 (744)
Q Consensus 413 ~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-~~gw~~~f~~~~~~~~~ 459 (744)
+.||+++|+.+....+|.++++.+++.+.. .+++...+++.+.+.++
T Consensus 354 ~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 354 KELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999999999999999888888776654 23455555555544433
|
|
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=188.10 Aligned_cols=315 Identities=10% Similarity=-0.074 Sum_probs=198.4
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.+++.++..++.++.|+++||+ |||+.++++.++.+++.+++.++++.+.+++.|++.|
T Consensus 33 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~----------g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 33 LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS----------GRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh----------CChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34444 348999999999999999999999999 7778888999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----hh-----Hhhh-hhh
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----AT-----KEGL-EKF 270 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~-~~~ 270 (744)
++.+...+...+++.|..|+ +|++..|+.+...+++.++++.+.........+....... .. .... ++.
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99988888888899999874 6999999999998888888876543322211111110000 00 0000 110
Q ss_pred ch-hh---HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhh
Q psy15142 271 NI-ER---EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPG 346 (744)
Q Consensus 271 ~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 346 (744)
+. ++ ...+..++.+++ ++.+...+...+. ................+++|+++.+.+.+.+...++..++.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 259 (392)
T PRK10473 183 PARAPAASSKPRENSESLLN--RFFLSRLVITTLS-VTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFST 259 (392)
T ss_pred CcccCCccchHHHHHHHHhC--HHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 001111111111 1111111111111 11111111111112245678888889999999999999999999
Q ss_pred HHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHh
Q psy15142 347 GFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGT 426 (744)
Q Consensus 347 g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~ 426 (744)
+++.||+|||+++.++.++..++.++ .....+.+..+....+.+.+.+...+. .+..+..|.++|+ |......
T Consensus 260 ~~l~~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~---g~~~~~~ 332 (392)
T PRK10473 260 PFALGIFKPRTLMLTSQVLFLAAGIT--LALSPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSLRA---GVASSTL 332 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcccc---cHHHHHH
Confidence 99999999999999888877777666 334333333333334444444333333 3334455655554 4444555
Q ss_pred hhHHHhhHHHHHHhhhccCchhHHHHHHHHH
Q psy15142 427 YAGIVLGLPISAILTEHFSWEAMFYFYGCMG 457 (744)
Q Consensus 427 ~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~ 457 (744)
.++..+++.+++++.+.+|+.......+.+.
T Consensus 333 ~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 333 GIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 6777788888888888778766555444433
|
|
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=188.11 Aligned_cols=306 Identities=11% Similarity=-0.016 Sum_probs=201.2
Q ss_pred hhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.++.+.. .|++.++++++..+++++.|+++||+ |||+.+.+++++.+++.+.+ .+++.+.+++.|++.
T Consensus 29 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 97 (355)
T TIGR00896 29 ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF----------GEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALI 97 (355)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh----------CchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHH
Confidence 3444443 49999999999999999999999999 67778888888777777776 778888888899999
Q ss_pred HHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh--h---hHhh---h-hhhc
Q psy15142 201 VAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID--A---TKEG---L-EKFN 271 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~-~~~~ 271 (744)
|++.+...+....++.|..|++||+++|+.+...++|..+++.+...........++.... . .... . +..+
T Consensus 98 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 177 (355)
T TIGR00896 98 GVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWIPQVRR 177 (355)
T ss_pred HHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999987777778888888888999999999999988887765432221111110111110 0 0000 0 0000
Q ss_pred hhhHHH----HHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhH
Q psy15142 272 IEREVA----TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGG 347 (744)
Q Consensus 272 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 347 (744)
.+++.. ...++.++ .+..|...+...+ ....+.....+...+. ++.|.+..+.+.+.+++.++.++++++.|
T Consensus 178 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~lp~~~-~~~g~~~~~~g~~~~~~~~~~i~~~~~~g 253 (355)
T TIGR00896 178 RVAANQTTTRLTPVRIWR--SPLAWQVTVFFGL-QSGLYYSLIGWLPAIL-ISHGASAATAGSLLALMQLAQAASALLIP 253 (355)
T ss_pred ccCCCCCCCCCCCchhhc--CHhHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHH
Confidence 000000 00001111 1111221111111 1111111111111122 34688889999999999999999999999
Q ss_pred Hhhhcc-CCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccC-ccchhHHHHHHHHH
Q psy15142 348 FFASRY-PANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAP-PLERSRLATIAFCG 425 (744)
Q Consensus 348 ~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p-~~~Rg~~~g~~~~~ 425 (744)
++.||+ +||+.+..+.++.+++.+. ..+..+.... ...++.|++.+..++...+.+.+..+ +++++...++.+..
T Consensus 254 ~l~dr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (355)
T TIGR00896 254 ALARRVKDQRGIVAVLAVLQLVGLCG--LLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSI 330 (355)
T ss_pred HHHhhhccchHHHHHHHHHHHHHHHH--HHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999 5666667777777666655 3333332222 24567899998888887777765554 56778999999999
Q ss_pred hhhHHHhhHHHHHHhhhccC
Q psy15142 426 TYAGIVLGLPISAILTEHFS 445 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~g 445 (744)
.++|..++|.+.|.+.++.|
T Consensus 331 ~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 331 GYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998776
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=195.78 Aligned_cols=310 Identities=10% Similarity=-0.032 Sum_probs=215.9
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
+|.+. +.|++.+++.++..++.+++|+++||+ |||+.++++.++.+++.++++++++.+.+++.|++.|
T Consensus 32 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G 101 (485)
T TIGR00711 32 LGSSLSQVQWVITSYMLANAISIPLTGWLAKRF----------GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQG 101 (485)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh----------CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 34444 349999999999999999999999999 7888899999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH-------h--hhHhhhhhh-
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI-------D--ATKEGLEKF- 270 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~- 270 (744)
++.+...+...+++.|..|+ +||+..|+++....+|..+++.+.....+...+.+.... . .......+.
T Consensus 102 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 102 FGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 99999889999999999985 699999999999999888876643322221111000000 0 000000000
Q ss_pred -c----------------------------h-----hhHHHH------------HHHHhhhh---------cCCCcceeh
Q psy15142 271 -N----------------------------I-----EREVAT------------YIKQYFEN---------AYGPYWQCV 295 (744)
Q Consensus 271 -~----------------------------~-----~~~~~~------------~~~~~~~~---------~~~~~~~~~ 295 (744)
. . +..... ..++...+ +.+..+...
T Consensus 182 ~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (485)
T TIGR00711 182 PAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGC 261 (485)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHH
Confidence 0 0 000000 00000000 011111111
Q ss_pred hhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH
Q psy15142 296 VGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT 375 (744)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~ 375 (744)
+..++.. ........+...+..+.+|.++.+.+++.....++..++.+++|++.||+|||+++.++.++.+++..+...
T Consensus 262 ~~~~~~~-~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~ 340 (485)
T TIGR00711 262 VYMSLLG-LGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF 340 (485)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 1111111 111111111222234567889999999999999999999999999999999999999988888877766311
Q ss_pred Hh--hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc
Q psy15142 376 AI--KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH 443 (744)
Q Consensus 376 ~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~ 443 (744)
.. ..+.+.+....++.|++.+...+.......+..|+++|+++.|+.+....+|+.+|+.+.+.+.++
T Consensus 341 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 341 TFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 224555666778899999888877778888889999999999999999999999999999988764
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >KOG0252|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.4e-19 Score=182.35 Aligned_cols=275 Identities=15% Similarity=0.147 Sum_probs=187.3
Q ss_pred ccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC-----hHHHHHHHHHHhhhhh
Q psy15142 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN-----PGSVIIVRICQGLVEG 396 (744)
Q Consensus 322 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~G~~~~ 396 (744)
++++...+.+..+.++|.++||++.|++.||+|||+++...++++.+++++++.....+ .+++...|++.|+|.|
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 35667788999999999999999999999999999999999999999987632222221 4567889999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc---------------cCchhHHHHHHHHHHHHH
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH---------------FSWEAMFYFYGCMGLLWY 461 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~---------------~gw~~~f~~~~~~~~~~~ 461 (744)
+-+|...++.+|....+.||...+...+...+|...|.+++-.+..- .=||..+.+.+++++++.
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888888777766554321 139999988888876665
Q ss_pred HHHHhhcccCCCCCCCCChHHHHHHHHhhcc--------ccc----ccCCCCCCCcHHHHhhc---HHHHHHHHHHHHHH
Q psy15142 462 LCWLWLSFEKPCLHPTISGRELLYIEKSLGS--------SVQ----VAMPTLATTPWREFAHS---MPVYAIIVANFCRS 526 (744)
Q Consensus 462 ~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~--------~~~----~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~ 526 (744)
..- +..||+++...-.++ +.+...++..+ +.. .+.+......+...+.. +.+...+..+|..-
T Consensus 240 y~R-l~M~Et~~Y~al~~~-~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllD 317 (538)
T KOG0252|consen 240 YFR-LKMPETARYTALVSK-KLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLD 317 (538)
T ss_pred Hhh-hcCCcchhHHHHhhc-CHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 444 445888765411110 10000011100 000 00001111112222222 45567788889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhhHHH--------HHHHHHHH-HHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHH
Q psy15142 527 WNFYLLVLFQASYLKSTFHLQIQETGF--------IGSLPHLL-MTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFG 597 (744)
Q Consensus 527 ~~~~~~~~~~p~~l~~~~g~s~~~~~~--------~~~~~~~~-~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~ 597 (744)
.++|....+...+++. .|+.+.+... ...+.... .+.|.++..+++|++||+ ...+.++.
T Consensus 318 iafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk----------~iq~~GF~ 386 (538)
T KOG0252|consen 318 IAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK----------YIQLMGFF 386 (538)
T ss_pred hhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH----------HHHHhhHH
Confidence 9999999999999986 4665443322 22222222 334667778899999986 46677777
Q ss_pred HHHHHHHHHhcc
Q psy15142 598 MEAFFFVVVAYT 609 (744)
Q Consensus 598 ~~~~~~~~~~~~ 609 (744)
+..+..+.+...
T Consensus 387 ~~~i~~~~~~~~ 398 (538)
T KOG0252|consen 387 IMTIFFFVIAGP 398 (538)
T ss_pred HHHHHHHHHcCC
Confidence 777766666543
|
|
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-18 Score=187.08 Aligned_cols=318 Identities=10% Similarity=0.031 Sum_probs=213.7
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
.|++.+++.+.+.++.+++|+++||+ |||++++++.++.+++.++++++.+. ++.|++.|++.++..
T Consensus 40 ~~~~~~~~~l~~~l~~~~~G~laDr~----------grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~ 106 (393)
T PRK11195 40 QPLLQMFFVLAYIVLAPFVGAFADSF----------PKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYS 106 (393)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhcc----------CCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 49999999999999999999999999 77778888988888887777766553 678999999999999
Q ss_pred ccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh--------hHhhhhhhc-----hhh
Q psy15142 209 SGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA--------TKEGLEKFN-----IER 274 (744)
Q Consensus 209 ~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-----~~~ 274 (744)
|...+++.|+.|+ +|+++.|+.+....+|.++||.+.....+.. ......... ....+.+.+ .+.
T Consensus 107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~ 185 (393)
T PRK11195 107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAALFNLFIPRLGARRPGQSW 185 (393)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCcccccccCC
Confidence 9999999999985 6999999999999888888876543322211 100000000 000011000 000
Q ss_pred HH---HHH----HHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhH
Q psy15142 275 EV---ATY----IKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGG 347 (744)
Q Consensus 275 ~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 347 (744)
+. ... .+..++++. .........+.........+. ......+.+|.++.+.|++.+...++..++++..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~ 262 (393)
T PRK11195 186 NPIALLRDFFHACRVLWRDKL--GRFSLAGTTLFWGAGATLRFL-VLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAA 262 (393)
T ss_pred CHHHHHHHHHHHHHHHHhCch--hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 011 111121111 111111111111111111111 11122456788999999999999999999999999
Q ss_pred HhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccc-hhHHHHHHHHHh
Q psy15142 348 FFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLE-RSRLATIAFCGT 426 (744)
Q Consensus 348 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~-Rg~~~g~~~~~~ 426 (744)
++.||.++|+++..+.+ .++..++ ....++.+..++..++.|++.+...+...+.+.+..|++. +|++.++.+...
T Consensus 263 ~l~~~~~~~~~~~~g~~-~~~~~~~--~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~ 339 (393)
T PRK11195 263 RLVTLETVLRVLPAGIL-MGLVVLL--MALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNE 339 (393)
T ss_pred HHhcCCcccchHHHHHH-HHHHHHH--HHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHH
Confidence 99999999998877753 3333333 3445566666677778899888888878888888766655 799999999999
Q ss_pred hhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 427 YAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 427 ~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
++|..++..+.+.+ +.+|-+..+.+.++..++...+...+
T Consensus 340 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 340 NLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988855 56777777777666555555544444
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-16 Score=178.08 Aligned_cols=142 Identities=10% Similarity=0.116 Sum_probs=127.4
Q ss_pred cccCchhhHHHHHHHHHHHHHhhhhhHHhhhc-cCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhh
Q psy15142 321 INWTVAQESAVDSSFFWGYLITQVPGGFFASR-YPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 321 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 399 (744)
+|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++ .+.+++.+.+++.+++.|++.|...
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~--~~~~~~~~~~~~~~~l~g~g~g~~~ 120 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFM--LAMSIYPDLIFYGLGTIAVGSGLFK 120 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHH--HHhcccHhHHHHHHHHHHhcccccc
Confidence 89999999999999999999999999999999 89999999999999999887 5667777788889999999999999
Q ss_pred hHHhHHhhhccCccc---hhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHH
Q psy15142 400 PAVHGIWRFWAPPLE---RSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCW 464 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~---Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 464 (744)
+...+++++++|+++ |+++.++.+.+.++|..+||.+++.+.+++||++.|.+.++..++..+..
T Consensus 121 ~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 121 ANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred CCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 999999999998764 88999999999999999999999999998999999998876555544333
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >KOG0255|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-16 Score=182.15 Aligned_cols=272 Identities=15% Similarity=0.100 Sum_probs=192.3
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
+.+..+.....+..+++.+|..+|++++|.++||+|||++++++.++.+++.++ .++++|++.+++.|++.|++.++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~--~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGIL--TAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHH--HHHhCcHHHHHHHHHHHHhhccch
Confidence 456667778888999999999999999999999999999999999999999977 789999999999999999999999
Q ss_pred hhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTI 478 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~ 478 (744)
..+...+++|+++++.|+.+..+ ......++.+++.+++++.. +||+.+++..++.++.+++ +++.||+|++....
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 99999999999999999999999 88888888888888888877 8999999999998877666 55557999874332
Q ss_pred Ch-HHHHHHHHhhccc-----cc-------------ccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 479 SG-RELLYIEKSLGSS-----VQ-------------VAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASY 539 (744)
Q Consensus 479 ~~-~~~~~~~~~~~~~-----~~-------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 539 (744)
.+ ++..+..+...+. .. ......+...+.++++.|.+....+......+. +.+.++.-.+
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~~y~gl~~ 343 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV-FSLVYYGLSL 343 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH-HhHHHHhhhh
Confidence 22 2322222221110 00 000011224567778877543333222222222 2222222222
Q ss_pred HHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccC
Q psy15142 540 LKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 610 (744)
Q Consensus 540 l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 610 (744)
....+|.+... .....+.....+....+.+.|++||| .....+..+..++++...+..
T Consensus 344 ~~~~lg~~~~~---~~~~~~~~~~p~~~~~~~~~~~~gR~----------~~~~~~~~~~~~~~~~~~~~~ 401 (521)
T KOG0255|consen 344 NVSGLGGNIYL---NFTLSGLVELPAYFRNGLLLPEFGRR----------PPLFLSLFLAGIGLLLFGWLP 401 (521)
T ss_pred hhhhcCchHHH---HHHHHHHHHhhHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHhh
Confidence 22334544433 33344446677777778999999876 466666666666666665544
|
|
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-18 Score=183.86 Aligned_cols=302 Identities=12% Similarity=-0.050 Sum_probs=194.0
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
+|.+. +.|++.++..++..++.+++|+++||+ |||+.+.++.++.+++.+++.++++.+.++++|++.|
T Consensus 21 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----------g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 90 (377)
T PRK11102 21 FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF----------GRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHG 90 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc----------CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 45554 349999999999999999999999999 7888899999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----hh-----hHhhhhh-h
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI----DA-----TKEGLEK-F 270 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~-~ 270 (744)
++.+...+...+++.|..|+ +|++.+|+.+....+|..+++.+.........+...... .. .....++ .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 91 LAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99998888888999999985 699999999999999888887654322221111111000 00 0000011 0
Q ss_pred chhh----HHH---HHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhh
Q psy15142 271 NIER----EVA---TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQ 343 (744)
Q Consensus 271 ~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 343 (744)
+.++ +.+ +..++.++ .++.+...+.. +..+...............+.+|+++.+.+++.++..++..++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 247 (377)
T PRK11102 171 PKERRQPFHLRTTIRNFASLFR--HKRVLGYMLAS-GFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT 247 (377)
T ss_pred cccccCCCChHHHHHHHHHHHc--ChHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 0000 001 11111221 11122211111 11111111111111112235678899999999999999999999
Q ss_pred hhhHHhhhccCCchhhHHHHHHHHHHHHHH-HHHh-hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHH
Q psy15142 344 VPGGFFASRYPANRIFGTAIACTSFLHLFV-PTAI-KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATI 421 (744)
Q Consensus 344 ~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~ 421 (744)
++.|++.||+|||+.+..+.++..+..+.. .... ..+.+.+.+...+.+.+.+...+....++.|..| +.|+++.++
T Consensus 248 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 326 (377)
T PRK11102 248 IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSL 326 (377)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHH
Confidence 999999999999999888876544433221 0111 2234444444444444445555566677788776 889999998
Q ss_pred HHHH-hhhHHHhhHHHHH
Q psy15142 422 AFCG-TYAGIVLGLPISA 438 (744)
Q Consensus 422 ~~~~-~~~g~~ig~~i~~ 438 (744)
.+.. ..+|..+++++++
T Consensus 327 ~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 327 AGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 7754 4566777776654
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=192.50 Aligned_cols=310 Identities=11% Similarity=-0.006 Sum_probs=214.1
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
+|.+. +.+++.+++.++..++.+++|+++||+ |||+.++++.++++++.+++++++|.+.+++.|++.|
T Consensus 36 l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~----------Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G 105 (495)
T PRK14995 36 LGASGNELLWIIDIYSLVMAGMVLPMGALGDRI----------GFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLA 105 (495)
T ss_pred hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34443 349999999999999999999999999 7888999999999999999999999999999999999
Q ss_pred Hhhhccccccccccccc-Cc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh---h------Hhhhhh-
Q psy15142 202 AFSGFAISGYNVNHLDI-AP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA---T------KEGLEK- 269 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~-~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~- 269 (744)
++.+...+.....+.+. .| ++|++.+|++....++|.+++|.+.....+...+.+...... . .....+
T Consensus 106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998877766655454 45 579999999999999999998876544433222211100000 0 000000
Q ss_pred hch---hhHHHH-------------H----------------------------HHHhhhhc--------CCCc-ceehh
Q psy15142 270 FNI---EREVAT-------------Y----------------------------IKQYFENA--------YGPY-WQCVV 296 (744)
Q Consensus 270 ~~~---~~~~~~-------------~----------------------------~~~~~~~~--------~~~~-~~~~~ 296 (744)
... +.+... . ...+...+ .+++ .....
T Consensus 186 ~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~ 265 (495)
T PRK14995 186 AGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGV 265 (495)
T ss_pred CCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHH
Confidence 000 000000 0 00000000 0000 01111
Q ss_pred hhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH
Q psy15142 297 GRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA 376 (744)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~ 376 (744)
...+...........+...+.+..+|.++.+.|+....+.++..++.++.|++.||+|+|+++..+.++.+++.+++...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~ 345 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT 345 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh
Confidence 11111111111111112222345578999999999999999999999999999999999999888888877776553211
Q ss_pred -hhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh
Q psy15142 377 -IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE 442 (744)
Q Consensus 377 -~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~ 442 (744)
..++.+...+..++.|++.+...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 346 ~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 346 DFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred cCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123455566678889999999888888899999999999999999999999999999999998865
|
|
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=185.86 Aligned_cols=259 Identities=11% Similarity=0.014 Sum_probs=188.3
Q ss_pred cccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh------cChHHHHHHH
Q psy15142 315 LGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK------LNPGSVIIVR 388 (744)
Q Consensus 315 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 388 (744)
..+.+++|++..+.+++.++. ....++++++|++.||+|+|++++++.++++++.++. +++ .+++.+.+.|
T Consensus 51 ~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~--ala~~~~i~~s~~~l~l~r 127 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLF--ALTFQEVIEGSVVRLSVYN 127 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHhcccccCcHHHHHHHH
Confidence 344688999999999988763 3445677789999999999999999999999999884 444 5788999999
Q ss_pred HHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHh-hHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 389 ICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVL-GLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 389 ~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~i-g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
++.|+|.+...+.....+.+++| ++||++.|+...+..+|+++ +++..+++. .+|+..|++.+++.+++.++++++
T Consensus 128 ~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 128 GLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888888999999997 78999999999999999976 444444443 368888888888888877777666
Q ss_pred cccCCCC-----CCCCChHHHHHH-------------------------------------HH---------------hh
Q psy15142 468 SFEKPCL-----HPTISGRELLYI-------------------------------------EK---------------SL 490 (744)
Q Consensus 468 ~~e~p~~-----~~~~~~~~~~~~-------------------------------------~~---------------~~ 490 (744)
+++.|.. .++.+++|.... .. ..
T Consensus 205 vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~ 284 (591)
T PTZ00207 205 MRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVI 284 (591)
T ss_pred eeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 6554321 111233332200 00 00
Q ss_pred ----------------c----c-ccc---------------cc--------C-C-CCCCCcHHHHhhcHHHHHHHHHHHH
Q psy15142 491 ----------------G----S-SVQ---------------VA--------M-P-TLATTPWREFAHSMPVYAIIVANFC 524 (744)
Q Consensus 491 ----------------~----~-~~~---------------~~--------~-~-~~~~~~~~~l~~~~~~~~~~~~~~~ 524 (744)
+ + +.+ .+ + . .....++.+.+++..+|++.+.+++
T Consensus 285 ~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~c 364 (591)
T PTZ00207 285 VLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFC 364 (591)
T ss_pred HHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHH
Confidence 0 0 000 00 0 0 0011267788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhh--HHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 525 RSWNFYLLVLFQASYLKSTFHLQIQE--TGFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 525 ~~~~~~~~~~~~p~~l~~~~g~s~~~--~~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
.......+.+.+.++.+..-|.+... ...+.++.++.+.+|++..|++.....+|
T Consensus 365 g~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~ 421 (591)
T PTZ00207 365 CVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKR 421 (591)
T ss_pred hhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhh
Confidence 98888888888888888733763332 33367889999999999999998444444
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.1e-17 Score=179.47 Aligned_cols=141 Identities=13% Similarity=0.149 Sum_probs=123.0
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc-cCCchhhHHHHHHHHHHHHHHHHHhhcChH-HHHHHHHHHhh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR-YPANRIFGTAIACTSFLHLFVPTAIKLNPG-SVIIVRICQGL 393 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~ 393 (744)
+..+++|++.++.+++.+.+.....+..+++|+++|| +||||++.++.++++++.++ ++++.+.. .++++|+++|+
T Consensus 40 yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~--~~~~~~~~~ll~~~~~l~~i 117 (489)
T PRK10207 40 FFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFM--TGMSLLKPDLIFIALGTIAV 117 (489)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHH--HHHhccchhHHHHHHHHHHh
Confidence 3456799999999999999998888888899999999 99999999999999999988 45555533 35578999999
Q ss_pred hhhhhhhHHhHHhhhccCcc--chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHH
Q psy15142 394 VEGVCYPAVHGIWRFWAPPL--ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGL 458 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~--~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~ 458 (744)
|.|...|...++++|.+|++ +|+.+.++++.+.++|..+||.+++++.+++||++.|++.++..+
T Consensus 118 g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 118 GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 99999999999999999887 458899999999999999999999999999999999998655433
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.3e-18 Score=187.34 Aligned_cols=315 Identities=13% Similarity=-0.005 Sum_probs=203.2
Q ss_pred hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhh-hhHHhhhhhHHHHHHHHHHhcCC------hhH
Q psy15142 121 AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVR-KLFNCGGFGMEAFFFVVVAYTKS------EVT 192 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gR-k~~~~~~~~~~~~~~~~~~~~~~------~~~ 192 (744)
..+|.+.. .|++.++..+...+..++.|+++||.++|. || |+.++++....+++.+++.+.++ .++
T Consensus 28 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~------Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 28 DVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRW------GKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCC------CCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 34455543 499999999999999999999999987665 45 66788888888877777776553 345
Q ss_pred HHHHHHHHHHhhhcccccccccccccCc--chhhHHHHHHhhhhhhhhHHHhhh-----ccCCcccchhhHHHhH--hh-
Q psy15142 193 ATMALCLGVAFSGFAISGYNVNHLDIAP--RYASILMGMSNGIGTIDIFISYIG-----RRGKSTMDADMQQKAI--DA- 262 (744)
Q Consensus 193 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p--~~rg~~~g~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~--~~- 262 (744)
+++.+++.+++.++...+..++..|+.+ ++|++..++.+...++|.+++..+ ...........++... ..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 5566777787878777788888899874 469999999988888876654322 1111000111111110 00
Q ss_pred ---hH-----hhh-hhh---chh----hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCch
Q psy15142 263 ---TK-----EGL-EKF---NIE----REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVA 326 (744)
Q Consensus 263 ---~~-----~~~-~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 326 (744)
.. ... ++. +.+ ....+.++..++ .++.+...+ ..+...............+....++ +..
T Consensus 182 l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 257 (437)
T TIGR00792 182 IGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFK--NDQLLILCL-AYLFYNLAFNIKNGVQVYYFTYVLG-DPE 257 (437)
T ss_pred HHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhC--CHHHHHHHH-HHHHHHHHHHHHcchhheeEeeecC-ChH
Confidence 00 000 110 000 001122222222 112222221 2121111111111111111122334 345
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh-cChHHHHHHHHHHhhhhhhhhhHHhHH
Q psy15142 327 QESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK-LNPGSVIIVRICQGLVEGVCYPAVHGI 405 (744)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~ 405 (744)
..+++.++..++.+++.+++++++||+|+|+++..+.++.+++.++. .+. ++.+.+++..++.|++.+...+..+++
T Consensus 258 ~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (437)
T TIGR00792 258 LFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIF--FFAGSNLPLILVLIILAGFGQNFVTGLVWAL 335 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777788889999999999999999999999999988877776653 332 355666677788899998889999999
Q ss_pred hhhccC-------ccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCch
Q psy15142 406 WRFWAP-------PLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWE 447 (744)
Q Consensus 406 ~~e~~p-------~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~ 447 (744)
++|..+ ++.+|.+.|+.+....+|..+++.+.|.+.+..||.
T Consensus 336 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 336 VADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 998865 456799999999999999999999999998877763
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-22 Score=222.08 Aligned_cols=333 Identities=12% Similarity=-0.005 Sum_probs=216.7
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC---ChhHHHHHHHHHHHhhh
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK---SEVTATMALCLGVAFSG 205 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g 205 (744)
.+++.++.+++..+|++++|+++||+ |||+.++++.++..++.++.++++ +++.+.+.|++.|++.|
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~----------GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g 117 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRY----------GRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIG 117 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccc----------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 37899999999999999999999999 777788899999999999999999 99999999999999999
Q ss_pred cccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccc------------------------------hh
Q psy15142 206 FAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMD------------------------------AD 254 (744)
Q Consensus 206 ~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~------------------------------~~ 254 (744)
...+....++.|++|+ +||+..++.+....+|.+++.++........ .+
T Consensus 118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~w 197 (451)
T PF00083_consen 118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRW 197 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence 9999999999999985 6999999999999888777765443332211 11
Q ss_pred hHHHh-HhhhHhhhhhhchh----hHHH---H----------HHHHhhhh-cCCCcceehhhhhhcccccchhhheeeec
Q psy15142 255 MQQKA-IDATKEGLEKFNIE----REVA---T----------YIKQYFEN-AYGPYWQCVVGRNFGSYVSFETHYIYFYL 315 (744)
Q Consensus 255 ~~~~~-~~~~~~~~~~~~~~----~~~~---~----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (744)
...+. .+++.+.+++.+.+ ++.. + ..++.+++ +++++....+.........+.....++..
T Consensus 198 L~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 277 (451)
T PF00083_consen 198 LLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSP 277 (451)
T ss_pred ecccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 11110 01111222211100 0000 0 01112222 11223333333333332333222222323
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH--HHh-hcC----hHHHHHHH
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP--TAI-KLN----PGSVIIVR 388 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~--~~~-~~~----~~~~~~~~ 388 (744)
...+..+.+.. -....+..+...++.+.+..+.||+|||++++.+.++++++.+.+. ... .++ ....++.-
T Consensus 278 ~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 355 (451)
T PF00083_consen 278 SIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFL 355 (451)
T ss_pred ccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceee
Confidence 33345555554 1222233444556667778999999999999999888777766531 111 111 11112222
Q ss_pred HHHh-hhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 389 ICQG-LVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 389 ~l~G-~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.+.. ....+..+..+.+.+|.+|++.|+++.|+......++..+++.+...+.+..+-...+.+.++++++..+..+++
T Consensus 356 ~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~ 435 (451)
T PF00083_consen 356 ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFF 435 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEE
Confidence 2222 222245567778999999999999999999999999999999998888877663456666666666776777777
Q ss_pred cccCCC
Q psy15142 468 SFEKPC 473 (744)
Q Consensus 468 ~~e~p~ 473 (744)
.||+..
T Consensus 436 lpET~g 441 (451)
T PF00083_consen 436 LPETKG 441 (451)
T ss_pred EeeCCC
Confidence 788843
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-17 Score=180.71 Aligned_cols=318 Identities=10% Similarity=-0.029 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHHhCCcccchhhhh-HHhhhhhHHHHHHHHHHhc---CChhHHHHHHHHHHHhhhcccccccccccc
Q psy15142 142 IVVPCGGMLADHLRKKGILSTTMVRKL-FNCGGFGMEAFFFVVVAYT---KSEVTATMALCLGVAFSGFAISGYNVNHLD 217 (744)
Q Consensus 142 ~g~~~~G~lsDr~~~r~~l~~~~gRk~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e 217 (744)
++++++|+++||+.+.+. |||+ .++++.++.+++.+.+++. ++.+++.+.+++.+++.+...+...++..|
T Consensus 60 ~~~~l~gpl~Dr~~~~~~-----Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~ 134 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFL-----GRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTD 134 (491)
T ss_pred HHHHHHHHHHHcccccCC-----CCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999844322 4554 5667777777777777665 467778888889998888888888999999
Q ss_pred cCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcc-cchhhHHHhHhh--------hHhhhhhhc----hhhH----HHHH
Q psy15142 218 IAP-RYASILMGMSNGIGTIDIFISYIGRRGKST-MDADMQQKAIDA--------TKEGLEKFN----IERE----VATY 279 (744)
Q Consensus 218 ~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~----~~~~----~~~~ 279 (744)
+.| ++||+..|+...+..+|.++++.+...... ...+........ .....++.. .++. ....
T Consensus 135 ~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~~~~~~~~~~~ 214 (491)
T PRK11010 135 VLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAP 214 (491)
T ss_pred hcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhhhHHHH
Confidence 998 579999999999999988888654332222 111111100000 000001110 0000 1112
Q ss_pred HHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHH-HHHHHHHHhhhhhHHhhhccCCchh
Q psy15142 280 IKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDS-SFFWGYLITQVPGGFFASRYPANRI 358 (744)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~Dr~Grr~~ 358 (744)
+++.+++ ++.|.......... ............+..+.+|++..+.+++.. ...++.+++.+++|+++||+|+|+.
T Consensus 215 l~~~~~~--~~~~~~ll~~~l~~-~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 215 LRDFFGR--NNAWLILLLIVLYK-LGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA 291 (491)
T ss_pred HHHHHcC--cCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3333322 12233222221111 111111111112223467999999999874 5567899999999999999999998
Q ss_pred hHHHHHHHHHHHHHHH-HHhh-cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHH
Q psy15142 359 FGTAIACTSFLHLFVP-TAIK-LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI 436 (744)
Q Consensus 359 l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i 436 (744)
+.++.++.++..+... .+.. ++...+.+..++..++.+...+...++..+..+++.+++..|+.+....+|..+++.+
T Consensus 292 l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 292 LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 8776665554433210 1222 3444444455555555565667778889999999999999999999999999999999
Q ss_pred HHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 437 SAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 437 ~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.|.+.+.+||+..|.+.++++++..++..++
T Consensus 372 ~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 372 AGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888876666555
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-18 Score=194.00 Aligned_cols=327 Identities=13% Similarity=0.033 Sum_probs=204.0
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc--CChhHHHHHHHHHHHhhhc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT--KSEVTATMALCLGVAFSGF 206 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 206 (744)
.|++.+++++++.++++++|+++||+ |||+++.+++++.+++.++++++ .+.+.++++|++.|++.+.
T Consensus 78 ~g~~~s~~~~~~~~~~~~~g~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~ 147 (465)
T TIGR00894 78 QGLILSSHFYGQIIIQIPVGYLAGKY----------VFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS 147 (465)
T ss_pred hhHHHHHHHHHHHHHHcchHHHHHHh----------CcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence 49999999999999999999999999 67778888888888887776543 5677888899999999999
Q ss_pred ccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCccc-chhhHHHh----Hhh-----hHhhh-hhhc--h
Q psy15142 207 AISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTM-DADMQQKA----IDA-----TKEGL-EKFN--I 272 (744)
Q Consensus 207 ~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~----~~~-----~~~~~-~~~~--~ 272 (744)
..+....++.|+.|+ +||+++|+.+.+..+|.++++.+....... ..+..... ... ..... ++.. .
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~ 227 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP 227 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC
Confidence 999999999999985 799999999999999988886643222111 11110000 000 00000 0000 0
Q ss_pred --hhHHHHHHHHhhhh-----c----------CCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHH
Q psy15142 273 --EREVATYIKQYFEN-----A----------YGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSF 335 (744)
Q Consensus 273 --~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 335 (744)
+++..+...+.... + .+..|...+ ..+...........+.+.+..+.+|.+..+.+++.++.
T Consensus 228 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~ 306 (465)
T TIGR00894 228 CISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWF-AIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLP 306 (465)
T ss_pred CCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHH
Confidence 00001111110000 0 000111111 11111111222112222233567888999999999999
Q ss_pred HHHHHHhhhhhHHhhhccCCchhh--------HHHHHHHHHHHHHHHHHh-hcChHHHHHHHHHHhhhhhhhhhHHhHHh
Q psy15142 336 FWGYLITQVPGGFFASRYPANRIF--------GTAIACTSFLHLFVPTAI-KLNPGSVIIVRICQGLVEGVCYPAVHGIW 406 (744)
Q Consensus 336 ~~~~~~~~~~~g~l~Dr~Grr~~l--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 406 (744)
.++..++.+++|+++||+++|+.. ..+......+..+..... ..+....+++..+.+.+.+...+......
T Consensus 307 ~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 386 (465)
T TIGR00894 307 YLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINS 386 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhch
Confidence 999999999999999998755321 111111111111100111 22333334444455555555555555566
Q ss_pred hhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc---CchhHHHHHHHHHHHHHHHHHhh
Q psy15142 407 RFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF---SWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 407 ~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.|..| +.+|.+.|+.+....+|+.++|.+.|.+.+.. +|...|.+.++..++..++..++
T Consensus 387 ~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 387 LDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred hhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 67776 48999999999999999999999999887643 38888888887777766555444
|
|
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-16 Score=175.90 Aligned_cols=239 Identities=12% Similarity=0.066 Sum_probs=163.3
Q ss_pred cccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCC-chhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhh
Q psy15142 315 LGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPA-NRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGL 393 (744)
Q Consensus 315 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 393 (744)
....+++|++..+.|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+ ..+.++++.+++.|++.|+
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 104 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF--AAQVTTPAGMFPVLLANSL 104 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHH
Confidence 33457789999999999999999999999999999999965 77777777777676666 4566788888889999998
Q ss_pred hhhhhhhHHhHHhh--------hccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 394 VEGVCYPAVHGIWR--------FWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 394 ~~~~~~~~~~~~~~--------e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
+.+...+...++.. |......|.+..| .+|.+++|++++.+....+|. +|++.+++.++..++.
T Consensus 105 ~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~- 176 (418)
T TIGR00889 105 AYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFA- 176 (418)
T ss_pred HHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHH-
Confidence 87766666555432 2222223444333 468888888888774333344 3555555555544443
Q ss_pred hhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy15142 466 WLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFH 545 (744)
Q Consensus 466 ~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 545 (744)
+..||+|+..++.+... . +....+.++++|+|.++.+.+..++..........+.+.|+++ .|
T Consensus 177 ~~~~e~~~~~~~~~~~~----~------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 239 (418)
T TIGR00889 177 LTLPDIPVAKSTAKMSI----K------------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FG 239 (418)
T ss_pred hcCCCCCCCccccccCH----H------------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hc
Confidence 44577643221100000 0 0001234567888888777777777666666666777888876 46
Q ss_pred CCh--------hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 546 LQI--------QETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 546 ~s~--------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.++ ...+...++..+..+++.++.|+++||+|+|+
T Consensus 240 ~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~ 282 (418)
T TIGR00889 240 RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK 282 (418)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 543 55688888888999999999999999999885
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-18 Score=187.18 Aligned_cols=300 Identities=18% Similarity=0.103 Sum_probs=208.2
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
.++.+. +.|++.+++.++..++.+++|+++||+ |||++++++.++.+++.++..++++.+.+++.|++.
T Consensus 26 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (352)
T PF07690_consen 26 ELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF----------GRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLL 95 (352)
T ss_dssp CSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-----------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccc
Confidence 344444 349999999999999999999999999 677788899998888866666778888888899999
Q ss_pred HHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHH---hH-hhhH-----hhh-hh
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQK---AI-DATK-----EGL-EK 269 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~-~~~~-----~~~-~~ 269 (744)
|++.+...+...+++.|+.|+ +|++.+|+.+.+.++|.++++.+........++.... .. .... ... ++
T Consensus 96 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 96 GIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---
T ss_pred ccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhc
Confidence 999999999999999999986 7999999999999999999977655443322221110 00 0000 000 00
Q ss_pred hch------hhH---HHHH----HHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccC-chhhHHHHHHH
Q psy15142 270 FNI------ERE---VATY----IKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT-VAQESAVDSSF 335 (744)
Q Consensus 270 ~~~------~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~ 335 (744)
... .++ .... ++..++++ ..| ..+...+...........+...+..+.+|++ ..+.+.+.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (352)
T PF07690_consen 176 PPPRERESPKESESKKPKPLKPGFKSLFKNP--VLW-ILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIF 252 (352)
T ss_dssp STTTT--SSTTTT--HHHCCCH-CTHHHHHH--CCH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc--hhh-hhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHH
Confidence 000 000 1110 11111111 122 1111111111111111112222235778888 78889999999
Q ss_pred HHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-HhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccc
Q psy15142 336 FWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-AIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLE 414 (744)
Q Consensus 336 ~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~ 414 (744)
.++..++.++.|+++||+|+|+..........+..+.... ....+....++..++.|++.+...+...+++.|.+|+++
T Consensus 253 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 332 (352)
T PF07690_consen 253 GIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY 332 (352)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999988877777666665554211 122344566667788999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhHHHhhH
Q psy15142 415 RSRLATIAFCGTYAGIVLGL 434 (744)
Q Consensus 415 Rg~~~g~~~~~~~~g~~ig~ 434 (744)
||++.|+.+...++|..+||
T Consensus 333 ~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 333 RGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999987
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.1e-18 Score=185.68 Aligned_cols=321 Identities=12% Similarity=0.062 Sum_probs=215.3
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHH---HhcCChhHHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVV---AYTKSEVTATMAL 197 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 197 (744)
.++.+. +.|++.+.++++..+++++.|+++||+ |||+++.+++.+.+++.+++ .++++++.+++.|
T Consensus 55 ~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~----------G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r 124 (438)
T PRK10133 55 AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL----------SYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGL 124 (438)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 344444 349999999999999999999999999 78889999999999998775 4678999999999
Q ss_pred HHHHHhhhcccccccccccccCcch-hhHHHHHHhhhhhhhhHHHhhhcc-----CCcc--------cc-hh--hHH---
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAPRY-ASILMGMSNGIGTIDIFISYIGRR-----GKST--------MD-AD--MQQ--- 257 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p~~-rg~~~g~~~~~~~~g~~~~~~~~~-----~~~~--------~~-~~--~~~--- 257 (744)
++.|++.|...+....++.|+.|++ |++.+++.+....+|..+++++.. ..+. .. .. .++
T Consensus 125 ~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~ 204 (438)
T PRK10133 125 FIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSL 204 (438)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHH
Confidence 9999999999999888889987764 666789999998898888876432 1110 00 00 010
Q ss_pred ----HhHh---h------h-Hhhhhhhc---hhhHH-------HHHHHHhhhhcCCCcceehhhhhhcccccchhhheee
Q psy15142 258 ----KAID---A------T-KEGLEKFN---IEREV-------ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYF 313 (744)
Q Consensus 258 ----~~~~---~------~-~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (744)
+... . . .......+ .++.. .+..++.+++ +..+...+.. +.........+.+.
T Consensus 205 ~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~--~~~~~~~l~~-~~~~~~~~~~~~~~ 281 (438)
T PRK10133 205 VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARI--RHWRWAVLAQ-FCYVGAQTACWSYL 281 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhC--chHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0000 0 0 00000000 00000 0011112211 1112222111 11111111111111
Q ss_pred ecc-cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHh
Q psy15142 314 YLG-KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQG 392 (744)
Q Consensus 314 ~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 392 (744)
..+ .++.+|.++.+.++....+.++..++.+++|++.||+|+|+++..+.++.+++.++ ..+.++. ..+...++.|
T Consensus 282 ~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~--~~~~~~~-~~~~~~~l~g 358 (438)
T PRK10133 282 IRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLI--SAFAGGH-VGLIALTLCS 358 (438)
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH--HHHcCCh-HHHHHHHHHH
Confidence 222 24567999999999999999999999999999999999999998887777666555 3334443 2345567889
Q ss_pred hhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHH
Q psy15142 393 LVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLW 460 (744)
Q Consensus 393 ~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~ 460 (744)
++.+..+|...+...+..|+ +.+.+.++... ..+|+.++|.+.|.+.+..| -+..|++..+..+..
T Consensus 359 lg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 99999999999999999875 45677777753 44788889999999999887 677877655544443
|
|
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.9e-18 Score=184.06 Aligned_cols=330 Identities=10% Similarity=-0.020 Sum_probs=203.8
Q ss_pred hhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHH---HhcC-----Chh
Q psy15142 121 AKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVV---AYTK-----SEV 191 (744)
Q Consensus 121 ~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~---~~~~-----~~~ 191 (744)
..++.+. +.|++.+++.++..+++++.|+++||+ |||+.++.++.+.++..... .+.+ ...
T Consensus 31 ~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~----------grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
T TIGR00882 31 DVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL----------GLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILV 100 (396)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3445655 349999999999999999999999999 66666666555444333221 1211 122
Q ss_pred HHHHHHHHHHHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHH--hH-hh--h--H
Q psy15142 192 TATMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQK--AI-DA--T--K 264 (744)
Q Consensus 192 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-~~--~--~ 264 (744)
..++.+++.+++.+...+....+..|..+ +++...|......++|.++++.+.............. .. .. . .
T Consensus 101 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 101 GAIVGGLYLGFVFSAGAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred HHHHHHHHHHHHhccchhhHHHHHHHhhh-hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHH
Confidence 23444666666666666666666555433 3455667777777787777766543332221110000 00 00 0 0
Q ss_pred -hhhhhhchhh------------HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccc---cccccCchhh
Q psy15142 265 -EGLEKFNIER------------EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKV---KHINWTVAQE 328 (744)
Q Consensus 265 -~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~s~~~~ 328 (744)
...++...++ ...+...+.++ .++.|...+.... ....+.........+.. .+.+.+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 256 (396)
T TIGR00882 180 MFAKPKAPSSATVANALGANASAFSLKLALELFR--QRKFWMFVLYVVG-VACVYDVFDQQFANFFTSFFATPQQGTRVF 256 (396)
T ss_pred HHhCCCCchhhhhhcccccccCCCCHHHHHHHHc--CCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccccchHHH
Confidence 0000000000 00011222221 1222222221111 11111110000111111 1224455667
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhh
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRF 408 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e 408 (744)
+.+.++..+...++.+..|++.||+|+|+.+.++.++.++...+ ....++.+.+++..++.|++..........+..+
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 334 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIG--SSFATTALEVVILKMLHAFEVPFLLVGCFKYITS 334 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH--HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999988888887766 4567788888888899998877766677778888
Q ss_pred ccCccchhHHHHH-HHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHh
Q psy15142 409 WAPPLERSRLATI-AFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 409 ~~p~~~Rg~~~g~-~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 466 (744)
..|++.++++.+. ++....+|..+++.++|++.+.+||+..|.+.+++.++..++..+
T Consensus 335 ~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 335 QFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred hCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 8898888887776 568899999999999999999999999999998888777665543
|
|
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=182.51 Aligned_cols=326 Identities=14% Similarity=0.066 Sum_probs=224.9
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHH---hc--CChhHHHHHHHHHHH
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA---YT--KSEVTATMALCLGVA 202 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~ 202 (744)
..|++.++..+-..+.++++|.++||+. ||++++.+-++.++..++.+ +. .+++.++++-++.|+
T Consensus 46 ~valv~~a~~LP~~Llsl~aG~laDr~d----------rrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~ 115 (524)
T PF05977_consen 46 MVALVQAASTLPILLLSLFAGALADRFD----------RRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI 115 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc----------chHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 4488999999999999999999999994 55556555544443332222 22 366778888999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh-----hHhh---hhh-hc-
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA-----TKEG---LEK-FN- 271 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~-~~- 271 (744)
+.++..|+..+++.|+.|+ +...+.++.+...++..++||.+.................. .... .+. ..
T Consensus 116 ~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~ 195 (524)
T PF05977_consen 116 GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP 195 (524)
T ss_pred HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 9999999999999999996 58888899888888877777654332211111000000000 0000 000 00
Q ss_pred ---hhhHHHHHHHHhhhh-cCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhH
Q psy15142 272 ---IEREVATYIKQYFEN-AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGG 347 (744)
Q Consensus 272 ---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 347 (744)
..+.....+++-++- ...+.....+...+.........+....+...+.+|.++...|++.+++.+|.++|+++.+
T Consensus 196 ~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~ 275 (524)
T PF05977_consen 196 SSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLP 275 (524)
T ss_pred cccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111112221110 0111111111111111111111222222333567888899999999999999999999999
Q ss_pred HhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhh
Q psy15142 348 FFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTY 427 (744)
Q Consensus 348 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~ 427 (744)
++.+|+++++++..+.++++++.+. .+++++.+..++..++.|++.........+.+.+..|++.||+.++++++...
T Consensus 276 ~l~~~~~~~~lv~~~~~~~a~~~~~--lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 276 RLRRRLSSRRLVLLASLLFALALLL--LALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF 353 (524)
T ss_pred HhhcccCcchhhHHHHHHHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence 9999999999999898888887777 67888888888888999999988888899999999999999999999999999
Q ss_pred hHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 428 AGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 428 ~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
.+..+|.++.|.+.+.+|.+..+.+.++..++..++..
T Consensus 354 g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998887776655555443
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=206.79 Aligned_cols=319 Identities=15% Similarity=-0.003 Sum_probs=212.8
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHh---hhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhh
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNC---GGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSG 205 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 205 (744)
.++..+++++.+.+.++++|+++||+ |||+++. .+.++.++..++....+++++++++|++.|++.+
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~----------~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a 123 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKY----------DKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSA 123 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhc----------cHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 37788899999999999999999999 4554432 2222222222333344789999999999999999
Q ss_pred cccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh---h------Hhhhhhhch---
Q psy15142 206 FAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA---T------KEGLEKFNI--- 272 (744)
Q Consensus 206 ~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~--- 272 (744)
+..+...+++.|+.|+ +|++++|+.+++.++|.++|+.+...+.....+........ . ....+....
T Consensus 124 ~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1140)
T PRK06814 124 LFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPD 203 (1140)
T ss_pred hhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 9999999999999985 69999999999999999999775544333222211110000 0 000000000
Q ss_pred ---hh----HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhh
Q psy15142 273 ---ER----EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVP 345 (744)
Q Consensus 273 ---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 345 (744)
.. +....++... +.+..|...++.++.... +.....+...+..+.+|.+....+++.+.+.++.++++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~ 280 (1140)
T PRK06814 204 LKIDRNIIRSTITLLKYAK--ADKRIWLAILGISWFWLV-GAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFL 280 (1140)
T ss_pred CeeccchHHHHHHHHHHHh--cCchHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011122211 122223333222222221 1121122223335668889999999999999999999999
Q ss_pred hHHhhhccCCchhhHHHHHHHHHHHHHHHHH------------------hhcChHHHHHHHHHHhhhhhhhhhHHhHHhh
Q psy15142 346 GGFFASRYPANRIFGTAIACTSFLHLFVPTA------------------IKLNPGSVIIVRICQGLVEGVCYPAVHGIWR 407 (744)
Q Consensus 346 ~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 407 (744)
.|+++|+.++++.+..+.++.+++.+.++.. ...+.+.+++..++.|++.+...+...+++.
T Consensus 281 ~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 360 (1140)
T PRK06814 281 ASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQ 360 (1140)
T ss_pred HHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999888777666666555554432111 1156667777888899999999989999999
Q ss_pred hccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-ccCchhHHHHHHHHHHHH
Q psy15142 408 FWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-HFSWEAMFYFYGCMGLLW 460 (744)
Q Consensus 408 e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-~~gw~~~f~~~~~~~~~~ 460 (744)
+.+|++.||+++|+.+....+|..+++++.+.+.+ ..++...+++.+++.++.
T Consensus 361 ~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 361 AWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIV 414 (1140)
T ss_pred hhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998874 445666666555544333
|
|
| >KOG0253|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-18 Score=172.21 Aligned_cols=328 Identities=13% Similarity=-0.005 Sum_probs=200.5
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcc
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFA 207 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 207 (744)
+..+++...+.++.+|+..+|.++|++| ||+...+...+..+.-.+.+..+|+.++.++|.+.++|.|.
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d~~g----------rr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg- 182 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSADTIG----------RRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG- 182 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehhhhh----------cchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-
Confidence 4488899999999999999999999995 44455566777777777888999999999999999999998
Q ss_pred cccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhcc---------------------------CCcccchhhHHHh
Q psy15142 208 ISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRR---------------------------GKSTMDADMQQKA 259 (744)
Q Consensus 208 ~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~---------------------------~~~~~~~~~~~~~ 259 (744)
.|...++=.|..|. +|+..+-+. +.+.+|.+....+.. .++++++......
T Consensus 183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G 261 (528)
T KOG0253|consen 183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKG 261 (528)
T ss_pred ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcC
Confidence 77666666788884 788877666 666666554433222 1222221110000
Q ss_pred -HhhhHhhhhhh---c------------h---hhHH---------------HHHHHHhhhhcCCCcceehhhhhhccccc
Q psy15142 260 -IDATKEGLEKF---N------------I---EREV---------------ATYIKQYFENAYGPYWQCVVGRNFGSYVS 305 (744)
Q Consensus 260 -~~~~~~~~~~~---~------------~---~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (744)
.+.+.+.+++. + . .++. .....+.+..+.++........+|+....
T Consensus 262 ~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs 341 (528)
T KOG0253|consen 262 DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS 341 (528)
T ss_pred ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHH
Confidence 00111111110 0 0 0000 00112223233333333333344444333
Q ss_pred chhhheee-eccc-ccccc-----------------cCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHH
Q psy15142 306 FETHYIYF-YLGK-VKHIN-----------------WTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACT 366 (744)
Q Consensus 306 ~~~~~~~~-~~~~-~~~~g-----------------~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~ 366 (744)
++...... .+.. .+..+ .+...--.=.-+..+.-..|.++.+++.||+|||+.+..+++++
T Consensus 342 yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f 421 (528)
T KOG0253|consen 342 YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILF 421 (528)
T ss_pred HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHH
Confidence 33311110 0000 00000 01110000112234556678889999999999999999999999
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 367 SFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
++..+++......|.. .+.-+..-++..+.+.+.+.|..|.+|+..|+++.|......++|+++.|+++ +.....-
T Consensus 422 ~iflfll~~c~~rn~~--tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~ 497 (528)
T KOG0253|consen 422 GIFLFLLTTCKTRNAY--TVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELST 497 (528)
T ss_pred HHHHHHHHHhcCcchh--HHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccce
Confidence 9988874333333332 22222333344555667899999999999999999999999999999999998 3333344
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 447 EAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 447 ~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
..+..+++.++++..+...++.-|+
T Consensus 498 sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 498 SLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred eehHHHHHHHHHHHHHHheeeeecc
Confidence 5666777778888888887775454
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.3e-17 Score=178.86 Aligned_cols=243 Identities=15% Similarity=0.072 Sum_probs=178.4
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc----cCCch-hhHHHHHHHHHHHHHHHHHhhcC------hHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR----YPANR-IFGTAIACTSFLHLFVPTAIKLN------PGSVII 386 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 386 (744)
.+.+|+++.+.|++.++..+..++..++.|+++|| +|||| .++.+.+.++++.++ +...++ ...+++
T Consensus 27 ~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~ 104 (437)
T TIGR00792 27 TDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL--LFTTPDFSATGKLVYAYI 104 (437)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH--HHhCCCCCcchHHHHHHH
Confidence 46789999999999999999999999999999998 67755 566777777776665 333332 344566
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhcc-CccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-------ccCchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWA-PPLERSRLATIAFCGTYAGIVLGLPISAILTE-------HFSWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~-p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-------~~gw~~~f~~~~~~~~ 458 (744)
.+++.+++.+.......++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ..||+..+.+.+++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~ 184 (437)
T TIGR00792 105 TYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGV 184 (437)
T ss_pred HHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHH
Confidence 677788887777777788888887 56899999999999888988887776655542 4589999999888887
Q ss_pred HHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
+..++.++..+|++++.+. ++ +.+......++.++++|.++..++..++...+.+....+.+.
T Consensus 185 ~~~~~~~~~~~e~~~~~~~---~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
T TIGR00792 185 VSLIICFFGTKERYSEIPK---NI--------------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVY 247 (437)
T ss_pred HHHHHHHcCCEecCCCCCc---cc--------------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhhe
Confidence 7776666666665421110 00 000001224667888999988887777777777766666666
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|.+...+ ++...+.+..+..++.+++.++.++++||+|+|+
T Consensus 248 ~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~ 288 (437)
T TIGR00792 248 YFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI 288 (437)
T ss_pred eEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 6665445 4556667777778999999999999999999874
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8e-18 Score=174.20 Aligned_cols=334 Identities=11% Similarity=0.075 Sum_probs=217.8
Q ss_pred ccccchhhhhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChh
Q psy15142 113 GMKCNLGFAKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV 191 (744)
Q Consensus 113 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~ 191 (744)
.+...+. ..++++. |.+++.++|.+...+..++-|.+.||+| -|++..+++++..+-.+..+++...+
T Consensus 35 ~l~~~i~-~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfG----------gR~~~~~s~~l~~IP~~~~~~a~~~~ 103 (417)
T COG2223 35 PLGVFIK-SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFG----------GRKWTILSMLLLLIPCLGLAFAVTYP 103 (417)
T ss_pred HHHhhhc-cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccC----------chHHHHHHHHHHHHHHHHHHHHccCC
Confidence 3444444 4445554 4499999999999999999999999995 33355567777777777777765444
Q ss_pred ---HHHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchh-hHH-----HhHh
Q psy15142 192 ---TATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDAD-MQQ-----KAID 261 (744)
Q Consensus 192 ---~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~-----~~~~ 261 (744)
+++++..+.|++.+ ..+....+++.+.|+ +.|.++|++. .+|+|..+..++.-..-..... .++ ....
T Consensus 104 ~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~ 181 (417)
T COG2223 104 STWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVA 181 (417)
T ss_pred chHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88888888887644 566677888899986 5999999999 8898876553322111111110 011 1111
Q ss_pred hhHhh------hhhhch-hh---HHH-HHHHHhhhhcCCCcceeh--hhhhhcccccchhhheeeecccccccccCchhh
Q psy15142 262 ATKEG------LEKFNI-ER---EVA-TYIKQYFENAYGPYWQCV--VGRNFGSYVSFETHYIYFYLGKVKHINWTVAQE 328 (744)
Q Consensus 262 ~~~~~------~~~~~~-~~---~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 328 (744)
..... .++.+. .. +.. ..++...+ .++.|... ....|+.++.+.. +...+..+++++++.+.
T Consensus 182 l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~--~~~~W~lsllY~~tFG~Fvgfs~---~l~~~~~~~fg~~~~~A 256 (417)
T COG2223 182 LAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFS--NKDTWLLSLLYFATFGGFVGFSA---YLPMYLVTQFGLSPVTA 256 (417)
T ss_pred HHHHHHHHHHHhCCChhhhccccccchhHHHHHhc--CcchHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCChhhH
Confidence 11100 011000 00 001 11222221 22334332 2223333332222 23334468899999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh-------cChHHHHHHHHHHhhhhhhhhhH
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK-------LNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
+.+...+.+...+..+.+|+++||+|.+|++++....++++..+. ... .+....+...+..+++.|.....
T Consensus 257 g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGs 334 (417)
T COG2223 257 GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALL--SLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGS 334 (417)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHH--HccccccccCcchHHHHHHHHHHHHHhccCcch
Confidence 999999999999999999999999999999999998888888773 322 23333333333344444444445
Q ss_pred HhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHhh
Q psy15142 402 VHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 402 ~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.+.++..++| ++-|...|+....+.+|+..-|...+...+..| +...|++...+.+++.++.+..
T Consensus 335 vfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 335 VFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred heeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777776 477899999999999999999999999888877 8888998888888877765544
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-17 Score=180.37 Aligned_cols=322 Identities=10% Similarity=-0.044 Sum_probs=208.6
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .|++.+++.++..++++++|.++||++|+.. .+|.+. ++..+. .......+++.+.+++.|++.+
T Consensus 34 ~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~-----~~~~~~-~~~~~~--~~~~~~~~~~~~~l~i~~~l~g 105 (382)
T PRK11128 34 QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP-----ALRLLA-LLTLLF--AVAFWFGAHSFWLLFVAIGLFN 105 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH-----HHHHHH-HHHHHH--HHHHHHhcccHHHHHHHHHHHH
Confidence 455553 4999999999999999999999999976431 233333 222221 2233345678888888999999
Q ss_pred HhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHH---HhH----hhhHhhh--hhhch
Q psy15142 202 AFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQ---KAI----DATKEGL--EKFNI 272 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~--~~~~~ 272 (744)
++.+...+...+++.++ .++|++..|.....+++|.++++.+.......-++... ... ....... +..+.
T Consensus 106 ~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 184 (382)
T PRK11128 106 LFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMPQ 184 (382)
T ss_pred HHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCCc
Confidence 98888888777777765 45578888888888888888776654332211111100 000 0000000 00000
Q ss_pred h---hH---HHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhh
Q psy15142 273 E---RE---VATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPG 346 (744)
Q Consensus 273 ~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 346 (744)
+ +. .....++.++ .++.|...+..++.... ......+...+. ++.|.+..+.|.+.++..++..+..++.
T Consensus 185 ~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 260 (382)
T PRK11128 185 GESRQQESAGWPAWKALLK--EPTVWRFLLCVSLLQGS-HAAYYGFSAIYW-QAAGYSASTIGYLWSLGVVAEVLIFAFS 260 (382)
T ss_pred cccccccccccchHHHHHc--ChhHHHHHHHHHHHHHH-hHhHHHHHHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0112222222 22223322222222111 111111111122 4578888889999998888888999999
Q ss_pred HHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHH-HH
Q psy15142 347 GFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAF-CG 425 (744)
Q Consensus 347 g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~-~~ 425 (744)
|++.||+|+|+.+..+.++.+++.++ ....++.+.+++..++.|++.+...+....++.+. +++++++..++.+ ..
T Consensus 261 g~l~~r~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 337 (382)
T PRK11128 261 NRLFRRWSARDLLLLSAICGVVRWGL--MGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALA 337 (382)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHH--HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHH
Confidence 99999999999999998888887766 45677888888899999999998888888998887 5666788899886 55
Q ss_pred hhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHH
Q psy15142 426 TYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWY 461 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~ 461 (744)
..+|..+||.++|.+.+.+|+ ..|+..+++.++.+
T Consensus 338 ~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 338 MGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 678889999999999999887 46666665554443
|
|
| >KOG0253|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.9e-16 Score=156.78 Aligned_cols=276 Identities=14% Similarity=0.136 Sum_probs=195.5
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
...|.+..+.+++......+..+++..+|.++|++|||+.+....+..++...+ .+.++|+..+++.|.+.|+|.|+
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~i--s~~spnf~~L~~f~~l~~~g~gg- 182 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVI--SGASPNFASLCVFRALWGFGVGG- 182 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHh--hcCCCCeehhhHHHHHHhccCCC-
Confidence 445677778899999999999999999999999999999999998888888877 68899999999999999999998
Q ss_pred hhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC-
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT- 477 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~- 477 (744)
.|...++-.|..|...|+..+-+. ..+.+|.+....+.-.++.++||||......++..+.+.+.++ .||+|+..-.
T Consensus 183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w-~~ESpRf~~~~ 260 (528)
T KOG0253|consen 183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVW-VYESPRFYLAK 260 (528)
T ss_pred ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhh-cccCcchhhhc
Confidence 899999999999999999887777 8899999999999999999999999999888776666555544 5999986422
Q ss_pred -CChHHHHHHHHhhccc--------------------------ccccCCCCCCCcHHHHhhc---HHHHHHHHHHHHHHH
Q psy15142 478 -ISGRELLYIEKSLGSS--------------------------VQVAMPTLATTPWREFAHS---MPVYAIIVANFCRSW 527 (744)
Q Consensus 478 -~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~ 527 (744)
.+.+..+.+++..+.+ ...+..+.......+++.. +........+|.+.+
T Consensus 261 G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnaf 340 (528)
T KOG0253|consen 261 GDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAF 340 (528)
T ss_pred CChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHH
Confidence 2222222222111000 0000011122334444432 223445666777888
Q ss_pred HHHHHHHHHHHHHHHhc--C-----------------CChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHH
Q psy15142 528 NFYLLVLFQASYLKSTF--H-----------------LQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVR 588 (744)
Q Consensus 528 ~~~~~~~~~p~~l~~~~--g-----------------~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r 588 (744)
.+|+........++... + .+......=..+..+....|.++.++++||+|||+
T Consensus 341 syyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKk-------- 412 (528)
T KOG0253|consen 341 SYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKK-------- 412 (528)
T ss_pred HHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchh--------
Confidence 88888877777766421 1 11111111234556778899999999999999985
Q ss_pred HHHHHHhHHHHHHHHHHHhcc
Q psy15142 589 KLFNCGGFGMEAFFFVVVAYT 609 (744)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~ 609 (744)
.+..++++.+++++++...
T Consensus 413 --TMal~l~~f~iflfll~~c 431 (528)
T KOG0253|consen 413 --TMALSLILFGIFLFLLTTC 431 (528)
T ss_pred --HHHHHHHHHHHHHHHHHHh
Confidence 3444555555555544433
|
|
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=175.97 Aligned_cols=307 Identities=11% Similarity=-0.037 Sum_probs=200.3
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+. +.|++.+++.++..++.+++|+++||+ |||+.+++++++.+++.++++++++.+.+++.|++.|
T Consensus 36 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 36 LQTSASAVSASLSLFLAGFALGQLLWGPLSDRY----------GRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc----------CCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34443 349999999999999999999999999 6777888888888888888899999999999999999
Q ss_pred HhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----h----hHhhh-hhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----A----TKEGL-EKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~-~~~~ 271 (744)
++.+...+...+++.|..|+ ++++..+..+....++..+++.+.....+...+....... . ..... ++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKK 185 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 98887777777888898876 5888888888878887777765433222211111100000 0 00001 1100
Q ss_pred hh--hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHh
Q psy15142 272 IE--REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFF 349 (744)
Q Consensus 272 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 349 (744)
.+ ++.....++.++++ +.+...+.... ....+.....+.... .+++|++..+.++......++..++.+..+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~p~~-~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l 261 (401)
T PRK11043 186 ARKQSQDALTFKQLLKSK--TYLGNVLIFAA-CSAAFFAWLTGSPFI-LEQMGYSPADIGLSYVPQTIAFLVGGYGCRAA 261 (401)
T ss_pred ccccchHHHHHHHHHcCh--hHHHHHHHHHH-HHHHHHHHHHHhHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 11111222222211 11211111111 111111111111111 24578888889988888888889999999999
Q ss_pred hhccCCchhhHHHHHHHHHHHHHHH-HHh--hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHh
Q psy15142 350 ASRYPANRIFGTAIACTSFLHLFVP-TAI--KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGT 426 (744)
Q Consensus 350 ~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~ 426 (744)
.||+|+|+.+....+..+++.+... ... .++.+.+++...+.|++.+..++...+...+..| +.||++.|+.+...
T Consensus 262 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~ 340 (401)
T PRK11043 262 LQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQ 340 (401)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHH
Confidence 9999999977665554444332210 111 2344555556677888888888988888888776 68999999999988
Q ss_pred hhHHHhhHHHHHHhhhcc
Q psy15142 427 YAGIVLGLPISAILTEHF 444 (744)
Q Consensus 427 ~~g~~ig~~i~~~l~~~~ 444 (744)
..+..+++.+.+.+.+..
T Consensus 341 ~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 341 LGLCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHHHHccCCC
Confidence 888888888888887643
|
|
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=175.71 Aligned_cols=320 Identities=11% Similarity=-0.033 Sum_probs=199.5
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
.++..++++++..++.+++|+++||+ |||++++.++++.+++.++++++++.++++++|++.|++.+...
T Consensus 53 ~~~~~s~~~~~~~~~~~~~G~l~dr~----------Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~ 122 (413)
T PRK15403 53 APASVSLYLAGGMALQWLLGPLSDRI----------GRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIA 122 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHc----------CchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 38889999999999999999999999 78888999999999999999999999999999999999988766
Q ss_pred ccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhh------h---Hhhhhh-hch-hh--
Q psy15142 209 SGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDA------T---KEGLEK-FNI-ER-- 274 (744)
Q Consensus 209 ~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~-~~~-~~-- 274 (744)
+...+++.|..|+ +|++.+++.+.+..+|.++++.+.....+...+........ . .....+ ... ++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~ 202 (413)
T PRK15403 123 TVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPF 202 (413)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCC
Confidence 6667888898875 59999999999999988888775543322212211110000 0 000011 000 00
Q ss_pred HH---HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhh
Q psy15142 275 EV---ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFAS 351 (744)
Q Consensus 275 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~D 351 (744)
.. .+..+..++ +++.|...+...+ ............+....+.+|.+..+.++.......+..++..+.+++.+
T Consensus 203 ~~~~~~~~~~~ll~--~~~~~~~~l~~~~-~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~ 279 (413)
T PRK15403 203 SAKSVLRDFRNVFR--NRLFLTGAATLSL-SYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVK 279 (413)
T ss_pred ChHHHHHHHHHHHc--CHHHHHHHHHHHH-HHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 111112221 1222222222111 11111111111222334567899999999887778888888888887765
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHH---hhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhh
Q psy15142 352 RYPANRIFGTAIACTSFLHLFVPTA---IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYA 428 (744)
Q Consensus 352 r~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~ 428 (744)
+.++++.+.....+..++.++...+ ..++++..++..++.++|.+...|......- .-....+|++.++.+.....
T Consensus 280 ~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~ 358 (413)
T PRK15403 280 DPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILM 358 (413)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHH
Confidence 5544444333322323333221111 1223333456777888888888777764332 11233579999999988888
Q ss_pred HHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q psy15142 429 GIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 429 g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 463 (744)
+..+++..++++.++ +-...|...++++.+....
T Consensus 359 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 359 VMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHH
Confidence 889999999888765 5566666555554444333
|
|
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-16 Score=174.01 Aligned_cols=309 Identities=11% Similarity=-0.055 Sum_probs=200.3
Q ss_pred hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 121 AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
..++.+.. .|++.++..++..++.+++|+++||+ |||+.+.+++++.+++.+++.++++.+.+++.|++
T Consensus 36 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~----------grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 105 (394)
T PRK11652 36 RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV----------GRRPVILVGMSIFILGTLVALFAHSLTVLIAASAI 105 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc----------CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 33455543 39999999999999999999999999 77778888988889988888899999999999999
Q ss_pred HHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----hh----hH-hhh-h
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI----DA----TK-EGL-E 268 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~----~~-~~~-~ 268 (744)
.|++.+...+....++.|..++ ++++..++.+.+..++.++++.+.........+...... .. .. ... +
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999887777777778888774 699999999999988888877654332222111111000 00 00 000 1
Q ss_pred hhchhh---HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhh
Q psy15142 269 KFNIER---EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVP 345 (744)
Q Consensus 269 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 345 (744)
+.+.++ +..+..++.++++ +.+...+. .+..................+.+|.+..+.+++.....++..+++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 262 (394)
T PRK11652 186 TRPADARRTRVLASYRTLLSNR--RFNCYLLM-LIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWF 262 (394)
T ss_pred cCccccchhHHHHHHHHHHcCh--HHHHHHHH-HHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1111222222211 11211111 11111111111111111223457888888899888888889999999
Q ss_pred hHHhhhccCCchhhHHHHHHHHHHHHHHHHH-hhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHH
Q psy15142 346 GGFFASRYPANRIFGTAIACTSFLHLFVPTA-IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFC 424 (744)
Q Consensus 346 ~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~ 424 (744)
.+++.||+|++........+.+......+.. ...+.+.+++..++.|++.+...|...++..|.+| +.+|++.++.+.
T Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 341 (394)
T PRK11652 263 AGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGG 341 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHH
Confidence 9999999984333222222222111111111 12345566777788999999999999999999987 678999999999
Q ss_pred HhhhHHHhhHHHHHHhhhc
Q psy15142 425 GTYAGIVLGLPISAILTEH 443 (744)
Q Consensus 425 ~~~~g~~ig~~i~~~l~~~ 443 (744)
...+|..+++.+++.+...
T Consensus 342 ~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 342 LQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHccCC
Confidence 9999999999999887654
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-17 Score=181.30 Aligned_cols=348 Identities=11% Similarity=-0.055 Sum_probs=224.2
Q ss_pred Eeeccccchhhhh--hcccc-cccccccchHHHHHHHHHHHHHHHHH-HHHhCCcccchhhhhHHhhhhhHHHHHHHHHH
Q psy15142 110 ISFGMKCNLGFAK--LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADH-LRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA 185 (744)
Q Consensus 110 ~~~~~~~~~~~~~--~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr-~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~ 185 (744)
...+++.|+. .. +|++. +.|++.+++.++..++.+++|+++|| + |||+.+++++++.+++.++.+
T Consensus 29 ~~~~L~~yl~-~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~----------G~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 29 MQGILAVYLV-QQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVW----------GTKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhc----------chHHHHHHHHHHHHHHHHHHH
Confidence 3444555543 22 45555 44999999999999999999999999 7 788889999999999999999
Q ss_pred hcCChhHHHHHHHHHHHhhhcccccccccccccCcc----hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh
Q psy15142 186 YTKSEVTATMALCLGVAFSGFAISGYNVNHLDIAPR----YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID 261 (744)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~----~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (744)
++++.+.+.+.+.+.+++.|+..+...++++|..|+ +|++.+++++.+.++|.++++.+.....+...+.......
T Consensus 98 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~ 177 (475)
T TIGR00924 98 MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLA 177 (475)
T ss_pred hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 988888888889999999999989999999998863 3888999999999999988876533222111111000000
Q ss_pred h------------hHhhhhh----hc--hhhHHHHHH----------------------------------------HHh
Q psy15142 262 A------------TKEGLEK----FN--IEREVATYI----------------------------------------KQY 283 (744)
Q Consensus 262 ~------------~~~~~~~----~~--~~~~~~~~~----------------------------------------~~~ 283 (744)
. ..+...+ .. .+++..... .+.
T Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (475)
T TIGR00924 178 AVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRL 257 (475)
T ss_pred HHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000 00 000000000 000
Q ss_pred hhhc-----CCCccee---hhhhhhcccccchhhheeeecccccccccCc----hhhHHHHHHHHHHHHHhhhhhH----
Q psy15142 284 FENA-----YGPYWQC---VVGRNFGSYVSFETHYIYFYLGKVKHINWTV----AQESAVDSSFFWGYLITQVPGG---- 347 (744)
Q Consensus 284 ~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~----~~~~~~~~~~~~~~~~~~~~~g---- 347 (744)
..++ .+++... .+......+..+........++..++.+.+. -..+++.++..+..++.+++..
T Consensus 258 ~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~ 337 (475)
T TIGR00924 258 AFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWT 337 (475)
T ss_pred HHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 0000 0011111 1111111112111111111111112222211 1256778888888777777655
Q ss_pred Hhhhc-cCCchhh--HHHHHHHHHHHHHHHHH-------hhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhH
Q psy15142 348 FFASR-YPANRIF--GTAIACTSFLHLFVPTA-------IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSR 417 (744)
Q Consensus 348 ~l~Dr-~Grr~~l--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~ 417 (744)
++.+| .+.+... .+|.++.+++.+..... ...|++.+++..++.++|.....|...+++++..|++.||+
T Consensus 338 ~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~ 417 (475)
T TIGR00924 338 RLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQ 417 (475)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHH
Confidence 44444 3334444 66777777776663111 13578888999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 418 LATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 418 ~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
++|++.....+|..+++.+.....+..+|...|...++.+++..++.+++.
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988777767888888888887777766665543
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >KOG3764|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=168.65 Aligned_cols=325 Identities=15% Similarity=0.099 Sum_probs=226.0
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcc
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFA 207 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 207 (744)
+.|++.+...+.+.+.+++.|.+.||+ |+|..+++|+.+....+++.++.++++.+++.|.++|+|.++.
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~i----------Gy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRI----------GYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHh----------ccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHH
Confidence 459999999999999999999999999 8888999999999999999999999999999999999999999
Q ss_pred cccccccccccCcc--hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHh-------HhhhHhh--hhhhchh---
Q psy15142 208 ISGYNVNHLDIAPR--YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKA-------IDATKEG--LEKFNIE--- 273 (744)
Q Consensus 208 ~~~~~~~~~e~~p~--~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~--- 273 (744)
.....++++|..|+ +||+++|+.-....+|.++||......-+.-....... .+...+. ++....+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 99999999999985 49999999999999999999765444333222111100 0111111 1111111
Q ss_pred hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeec--ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhh
Q psy15142 274 REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYL--GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFAS 351 (744)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~D 351 (744)
.+...++.+.+..++ .+.......+ .+....+.-+.+ .+.+.+..+.-+.|+..--..+.+.++..+.|.++|
T Consensus 257 ~~~~~~~~~Ll~dP~--I~~~agai~~---~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~ 331 (464)
T KOG3764|consen 257 TEQGTPMWSLLMDPY--ILLIAGAITF---SNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLAD 331 (464)
T ss_pred cccCccHHHHHhCch--Hhhhhcchhh---ccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHH
Confidence 111122333333222 1122222211 122222222322 224555533337777777778889999999999999
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCc---c---chhHHHHHHHHH
Q psy15142 352 RYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPP---L---ERSRLATIAFCG 425 (744)
Q Consensus 352 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~---~---~Rg~~~g~~~~~ 425 (744)
|++.-+.+.....+..++..+.+.-+++++..+++-++..+++.+.......-...+..+. + .-|...++...+
T Consensus 332 k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a 411 (464)
T KOG3764|consen 332 KYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAA 411 (464)
T ss_pred hcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHH
Confidence 9995544443333333333333345677888888888888887776665554444444433 2 457889999999
Q ss_pred hhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 426 TYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
..+|..+||.++|.+.+.+|++|...+.++..++...+..++
T Consensus 412 ~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 412 FSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888888776655544
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=173.92 Aligned_cols=338 Identities=11% Similarity=-0.019 Sum_probs=202.8
Q ss_pred eccccchhhhhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchh-hhhHHhhhhhHHHHHHHHHHhcC-
Q psy15142 112 FGMKCNLGFAKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMV-RKLFNCGGFGMEAFFFVVVAYTK- 188 (744)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~g-Rk~~~~~~~~~~~~~~~~~~~~~- 188 (744)
..+|.++. ..|++.++ |++.++... .+.++++|+++||+..+.. | ||+.+.++.++.+++..+.++.+
T Consensus 20 ~~~~~~l~--~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~-----g~rr~~l~~~~~~~~l~~~~l~~~~~ 90 (402)
T PRK11902 20 GTLQAWMT--VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLL-----GRRRGWLLLTQVGLAASIAAMAFCPP 90 (402)
T ss_pred HHHHHHHH--HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCC-----CcchhHHHHHHHHHHHHHHHHHhcCc
Confidence 34455443 34676654 888777776 6999999999999932211 3 34467777777777777777663
Q ss_pred --ChhHHHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc-cchhhHHHhH---h
Q psy15142 189 --SEVTATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST-MDADMQQKAI---D 261 (744)
Q Consensus 189 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~---~ 261 (744)
+.+.+.++.++.+++.+...+...+++.|+.|+ +|+++.++...+..+|.+++..+...... ...+...... .
T Consensus 91 ~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~ 170 (402)
T PRK11902 91 HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGL 170 (402)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHH
Confidence 456666666666777777788889999999986 59999999998888888877553322211 1111110000 0
Q ss_pred -----hhHhhhhhh-ch---hh----HHHHHHHHhhhhcCCCcceehhhhhhcccc-cchhhheeeecccccccccCchh
Q psy15142 262 -----ATKEGLEKF-NI---ER----EVATYIKQYFENAYGPYWQCVVGRNFGSYV-SFETHYIYFYLGKVKHINWTVAQ 327 (744)
Q Consensus 262 -----~~~~~~~~~-~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~s~~~ 327 (744)
......++. .. ++ +..+.+++.++++ ..+...+...+.... .....+..+ ...+++|+++.+
T Consensus 171 ~l~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~l~~~~~~~~~~~~~~--~l~~~~G~~~~~ 246 (402)
T PRK11902 171 MLAGALTTLWAPEPEVPARPPRSLGEAVVGPLRDFFSRR--GAWALLLLIVLYKLGDAFAGSLSTT--FLIRGAGFSAGE 246 (402)
T ss_pred HHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHhCc--CHHHHHHHHHHHHhHHHHHHHHHHH--HHHHhcCCCHHH
Confidence 000000111 00 00 1111222333222 122222211111111 111111111 224567999999
Q ss_pred hHHHHHHHH-HHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHhh-cChHHHHHHHH----HHhhhhhhhhh
Q psy15142 328 ESAVDSSFF-WGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAIK-LNPGSVIIVRI----CQGLVEGVCYP 400 (744)
Q Consensus 328 ~~~~~~~~~-~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~----l~G~~~~~~~~ 400 (744)
.+++.+... ++..++.+++|++.||+|+|+.+..+.++.++..+... .+.. ++.+.+++..+ +.|++.+...+
T Consensus 247 ~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 326 (402)
T PRK11902 247 VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVA 326 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999876654 45788999999999999999988777766555443310 1233 34454444443 44555666666
Q ss_pred HHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHh
Q psy15142 401 AVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 401 ~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 466 (744)
....++.+.+|.+. .++.+....+|..+++.++|.+.+.+||+..|.+.++++++..++.+.
T Consensus 327 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 327 LLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 67777777776544 455555667777777778999999999999999988888776555433
|
|
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.5e-17 Score=175.14 Aligned_cols=296 Identities=8% Similarity=-0.098 Sum_probs=184.1
Q ss_pred hcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhH-HhhhhhHHHHHHHHHHhc---CChhHHHHHH
Q psy15142 123 LQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLF-NCGGFGMEAFFFVVVAYT---KSEVTATMAL 197 (744)
Q Consensus 123 ~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 197 (744)
.|.+.+. |++..+ .+...+ ++++|+++||+..|+. |||+. ++.+.++.++...+.++. .+.+.+..+.
T Consensus 18 ~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~-----Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~ 90 (356)
T TIGR00901 18 KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFF-----GRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLA 90 (356)
T ss_pred cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCC-----CccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHH
Confidence 3455433 777544 333344 9999999999954432 67665 567777777777777776 3445555666
Q ss_pred HHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCc-ccch-----hhHHHhHhh--------
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKS-TMDA-----DMQQKAIDA-------- 262 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~-----~~~~~~~~~-------- 262 (744)
++.+++.+...++..+++.|+.|+ +|+++.|+...+.++|.++++.+..... .... +.++.....
T Consensus 91 ~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~ 170 (356)
T TIGR00901 91 FLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPG 170 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHH
Confidence 677777777778888999999974 6999999999999999888765442221 1111 001111100
Q ss_pred -hH-h-hhhhhc----hhhH----HHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHH
Q psy15142 263 -TK-E-GLEKFN----IERE----VATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAV 331 (744)
Q Consensus 263 -~~-~-~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 331 (744)
.. . ..++.. .+++ ..+.+++.++++..+.+...+...+.....+.........+.. ++|++..+.+.+
T Consensus 171 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~g~~ 249 (356)
T TIGR00901 171 LLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLL-DMGFSKEEIALV 249 (356)
T ss_pred HHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHH
Confidence 00 0 001100 0000 1112233332222111222222222222222222222222223 388999999988
Q ss_pred HHHHH-HHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh----------cChHHHHHHHHHHhhhhhhhhh
Q psy15142 332 DSSFF-WGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK----------LNPGSVIIVRICQGLVEGVCYP 400 (744)
Q Consensus 332 ~~~~~-~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~G~~~~~~~~ 400 (744)
.++.. ++..++.+++|+++||+|||+.+..+.++.+++..+.. ... ++.+.+..+.++.+++.+...+
T Consensus 250 ~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (356)
T TIGR00901 250 AKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFV-WLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTV 328 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-HHHhcCcccccccchHHHHHHHHHHHHHHhHHHHH
Confidence 87665 56788999999999999999998888887776655421 111 2345667778888999999999
Q ss_pred HHhHHhhhccCccchhHHHHHHHHHhh
Q psy15142 401 AVHGIWRFWAPPLERSRLATIAFCGTY 427 (744)
Q Consensus 401 ~~~~~~~e~~p~~~Rg~~~g~~~~~~~ 427 (744)
...+++.|.+|+++||+.+|+.+...+
T Consensus 329 ~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 329 AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 999999999999999999999887654
|
|
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-21 Score=215.24 Aligned_cols=249 Identities=18% Similarity=0.195 Sum_probs=181.1
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc---ChHHHHHHHHHHhhhhhhhhhHH
Q psy15142 326 AQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL---NPGSVIIVRICQGLVEGVCYPAV 402 (744)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~ 402 (744)
...+++.+...+|..+|++++|+++||+|||+.++++.++..++.++ .++++ +++.+.++|++.|++.|+..+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSIL--IAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence 45788999999999999999999999999999999999999999988 67888 89999999999999999999999
Q ss_pred hHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc---cCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q psy15142 403 HGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH---FSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTIS 479 (744)
Q Consensus 403 ~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~ 479 (744)
..|+.|..|++.|+...++.+....+|..++..++..+... .+||..+.+.++++++..+.. ++.||+|++.-...
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~ 202 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKG 202 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceecccc
Confidence 99999999999999999999999999999888877655433 359999999988887765555 45599999854332
Q ss_pred h-HHHHHHHHhhccc------ccc-----cCCCCCCCcHHHHhhcHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 480 G-RELLYIEKSLGSS------VQV-----AMPTLATTPWREFAHSMP-----VYAIIVANFCRSWNFYLLVLFQASYLKS 542 (744)
Q Consensus 480 ~-~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 542 (744)
+ +|.++..+...+. ..+ +..+..+..++++++++. +..+.+..+....+.+...+|.+.++++
T Consensus 203 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~ 282 (451)
T PF00083_consen 203 RDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN 282 (451)
T ss_pred cccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 2 1222211111100 000 000011134666666632 2233333344445555666777777765
Q ss_pred hcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 543 TFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 543 ~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.|.+.. -.......+...++.+++.++.||+|||+
T Consensus 283 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~ 317 (451)
T PF00083_consen 283 -AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK 317 (451)
T ss_pred -cccccc--ccccccccccccccccccccccccccccc
Confidence 566655 23334555667778888889999999985
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-16 Score=172.44 Aligned_cols=314 Identities=11% Similarity=0.015 Sum_probs=203.5
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHh---cCChhHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY---TKSEVTATMALC 198 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 198 (744)
++.+. +.|++.+..+++..+++++.|+++||+ |||+.+++++++.+++.++... .++++.+++.|+
T Consensus 33 ~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~----------G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 33 FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL----------SYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 34444 349999999999999999999999999 7888899999998888877643 467888899999
Q ss_pred HHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCc--ccc---------------------hh
Q psy15142 199 LGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKS--TMD---------------------AD 254 (744)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~--~~~---------------------~~ 254 (744)
+.|++.|...+....++.+..|+ +|++.+++.+...++|..+++.+..... ... +.
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 99999999999888888888875 6999999999999999888876432211 000 00
Q ss_pred hHHHhHhh-------h---Hhhhhhhch---hhHHH----HHHHHhhhhcCCCcceehhhhhhcccccchhhheeeeccc
Q psy15142 255 MQQKAIDA-------T---KEGLEKFNI---EREVA----TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGK 317 (744)
Q Consensus 255 ~~~~~~~~-------~---~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (744)
..++.... . .-...+.+. +++.+ +..++.++ +++.+...+.. +.........+.+...+.
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~-f~yvg~e~~~~s~l~~y~ 259 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLAR--IRHYREGVIAQ-FFYVGVQIMCWTFIIQYA 259 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHh--ChhHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 00111100 0 000011110 00000 11111111 11122222222 211111111222111111
Q ss_pred cc-ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhh
Q psy15142 318 VK-HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 318 ~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 396 (744)
.+ ..+.+....+...+.+..+..+|.++++++.||+++|+++.++.++.++..++ ....++.. .....++.|++.+
T Consensus 260 ~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll--~~~~~~~~-~~~~l~~~glf~s 336 (410)
T TIGR00885 260 VRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLG--SIFAGGHV-GLYCLTLCSAFMS 336 (410)
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH--HHHcCChH-HHHHHHHHHHHHH
Confidence 11 22344444455666677788999999999999999999998888888877776 34444433 3556677889999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc------CchhHHHHHH
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF------SWEAMFYFYG 454 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~------gw~~~f~~~~ 454 (744)
..+|...++..+..+++.+....++... .+|+.+.|++.|.+.|.. +.+..|++..
T Consensus 337 ~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 337 LMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 9999999999999987665444444443 399999999999999954 4666776543
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-14 Score=158.04 Aligned_cols=241 Identities=11% Similarity=0.082 Sum_probs=172.9
Q ss_pred ccccccCchhhHHHH--HHHHHHHHHhhhhh-HHhhhccCCchhhHHHHHHHHH-HHHHHH-HHhhcC-hHHHHHHHHHH
Q psy15142 318 VKHINWTVAQESAVD--SSFFWGYLITQVPG-GFFASRYPANRIFGTAIACTSF-LHLFVP-TAIKLN-PGSVIIVRICQ 391 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~--~~~~~~~~~~~~~~-g~l~Dr~Grr~~l~~~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~l~ 391 (744)
.++.|.+.+++|++. ++..+...+.+++. ++..||+||||..++...+... ....+. .....+ ...++...++.
T Consensus 28 l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (390)
T TIGR02718 28 LREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACA 107 (390)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHH
Confidence 366799999999973 55677776777777 5579999999987655533222 121110 111222 22334444556
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
+++.+...+...++..|..++++++.+.+....+..+|..+|+...+.+.+++|||..|++.+++.++..+..+++.|++
T Consensus 108 ~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 108 SLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 66777777888888999999888898888888888999999999999999999999999999988877666655553333
Q ss_pred CCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Q psy15142 472 PCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQET 551 (744)
Q Consensus 472 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 551 (744)
+++.+ . ++ ....++++++|+|.++...+..++...+......+.+.|+++ .|+++.+.
T Consensus 188 ~~~~~-~--~~------------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~i 245 (390)
T TIGR02718 188 VASPE-A--PL------------------ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWI 245 (390)
T ss_pred cCccc-c--ch------------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHH
Confidence 21110 0 00 001236678888888877777777777777777888999987 69999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHhHHhhhcC
Q psy15142 552 GFIGSLPHL-LMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 552 ~~~~~~~~~-~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.+.....+ ..+++.+++|++.||+++|+
T Consensus 246 g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 275 (390)
T TIGR02718 246 GRLGMAGGAVTVLLGCGGGAWLVRRAGLWR 275 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 998877764 56677899999999999874
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.1e-17 Score=175.35 Aligned_cols=294 Identities=10% Similarity=-0.043 Sum_probs=186.9
Q ss_pred hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC-ChhHHHHHHH
Q psy15142 121 AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK-SEVTATMALC 198 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 198 (744)
..++.+.. .|++.++..++..++++++|+++||+ |||+.++++.++.+++.+++++++ +.+.+++.|+
T Consensus 30 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 99 (366)
T TIGR00886 30 DDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF----------GPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRL 99 (366)
T ss_pred HHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44566653 49999999999999999999999999 777788899999999999999998 9999999999
Q ss_pred HHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc----------cchhhHHH-hH----hh
Q psy15142 199 LGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST----------MDADMQQK-AI----DA 262 (744)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~-~~----~~ 262 (744)
+.|++.+. ......+++|+.|+ +|++.+++.....++|..+++.+...... ...+.+.. .. ..
T Consensus 100 ~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 100 FIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 99998654 44567788999975 69999999987777766555432211000 00111110 00 00
Q ss_pred h----H-hh-hhhhch---hhHHH-H------------HHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccc
Q psy15142 263 T----K-EG-LEKFNI---EREVA-T------------YIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKH 320 (744)
Q Consensus 263 ~----~-~~-~~~~~~---~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (744)
. . .. .+.... +.+.. . ...+.++ .++.|...+.. +...........+...+..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 255 (366)
T TIGR00886 179 LPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFR--DRHTWILALLY-SVTFGSFLGVSSIFAMFFKDQ 255 (366)
T ss_pred HHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHh--ccchhhHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 010000 00000 0 1111111 12222222221 111111111111222233456
Q ss_pred cccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc--ChHHHHHHHHHHhhhhhhh
Q psy15142 321 INWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL--NPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 321 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~ 398 (744)
+|+++.+.+++.++..+...++.+++|+++||+|+|+.+..+....+++..++...... +.+..++..++.+++.+..
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (366)
T TIGR00886 256 FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAG 335 (366)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccc
Confidence 78889999999999999999999999999999999998887776666655543222222 4444444445555555666
Q ss_pred hhHHhHHhhhccCccchhHHHHHHHHHhhhH
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAFCGTYAG 429 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g 429 (744)
.+...+++++..| +.+|++.|+.+...++|
T Consensus 336 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 336 NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6667778888887 69999999998877765
|
|
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.6e-16 Score=170.36 Aligned_cols=326 Identities=13% Similarity=0.059 Sum_probs=225.3
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc--CChhHHHHHHHHHHHhhhcc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT--KSEVTATMALCLGVAFSGFA 207 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~ 207 (744)
++..++..+..++-.|+.|.++|+-++ ||+++.+...+.++..++..+. ++++...++.+++.++.+..
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~---------Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~ 143 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGR---------RKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEAS 143 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccc---------chHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 667788999999999999999997643 5556666666666666666664 34555666777777788888
Q ss_pred cccccccccccCcc-hh--------------------------hHHHHHHhhhhhhhhHHHhhhccCCcccchhh-----
Q psy15142 208 ISGYNVNHLDIAPR-YA--------------------------SILMGMSNGIGTIDIFISYIGRRGKSTMDADM----- 255 (744)
Q Consensus 208 ~~~~~~~~~e~~p~-~r--------------------------g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~----- 255 (744)
.....+++.|++++ .+ +++.|.....+++|+++..++...........
T Consensus 144 ~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~ 223 (477)
T PF11700_consen 144 NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTW 223 (477)
T ss_pred HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccch
Confidence 88899999999964 46 99999999999999988766433221111000
Q ss_pred -HHHh----------HhhhH-hhhhhhch-------hhHHHHHHHHh---hh--hcCCCcceehhhhhhcccccchhhhe
Q psy15142 256 -QQKA----------IDATK-EGLEKFNI-------EREVATYIKQY---FE--NAYGPYWQCVVGRNFGSYVSFETHYI 311 (744)
Q Consensus 256 -~~~~----------~~~~~-~~~~~~~~-------~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (744)
.+.. ..... ..+++.+. .......+++. ++ ++++. ....+...+...+...+...
T Consensus 224 ~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~-~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 224 AIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQ-LFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHHHHHH
Confidence 0100 00000 00011100 00011112221 11 12221 11222222222333333333
Q ss_pred eeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCc--hhhHHHHHHHHHHHHHHHHHh--------hcCh
Q psy15142 312 YFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPAN--RIFGTAIACTSFLHLFVPTAI--------KLNP 381 (744)
Q Consensus 312 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr--~~l~~~~~~~~~~~~~~~~~~--------~~~~ 381 (744)
...++..+.+|++..+...+..+..+..++|++++|++.||+|.| +++++++++..+..+. ..+ ..+.
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~--g~~G~~~~~~g~~~~ 380 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLY--GLFGFWPSFFGLKSP 380 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH--HHHHhhhcccCcccH
Confidence 344444678999999998888889999999999999999999999 8888887776544443 122 4567
Q ss_pred HHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHH
Q psy15142 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLW 460 (744)
Q Consensus 382 ~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~ 460 (744)
+.+.+..++.|++.|..++..-++.+|+.|+++.+..+|++.......+.+||++.|.+.+..| -|..+....++.++.
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~g 460 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIG 460 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 7888889999999999999999999999999999999999999999999999999999998876 788888877777776
Q ss_pred HHHHHhh
Q psy15142 461 YLCWLWL 467 (744)
Q Consensus 461 ~~~~~~~ 467 (744)
+++.++.
T Consensus 461 l~ll~~v 467 (477)
T PF11700_consen 461 LILLFFV 467 (477)
T ss_pred HHHHhhc
Confidence 6665443
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >KOG2615|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.7e-16 Score=157.04 Aligned_cols=247 Identities=15% Similarity=0.070 Sum_probs=161.3
Q ss_pred cCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHH
Q psy15142 323 WTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAV 402 (744)
Q Consensus 323 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 402 (744)
.+..-.|.+.+.+++...+.++.+|.++||+|||+++.+|++..++..++ ++.+.|+..+++.|++.|+.-|-. .++
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll--~~~S~~F~afv~aR~l~Gi~kgnl-~v~ 141 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLL--WALSRNFAAFVLARFLGGIFKGNL-SVI 141 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhccCch-HHH
Confidence 34456789999999999999999999999999999999999999998887 788999977777799999997654 668
Q ss_pred hHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh---ccCchhHHHH-H---HHHHHHHHHHHHhhcccCCCCC
Q psy15142 403 HGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE---HFSWEAMFYF-Y---GCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 403 ~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~---~~gw~~~f~~-~---~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
.++++|.++++.|+.+++......++|.++||.++|++.+ ..|- .+|.. + .++.........++.||+-+.+
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~-~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGS-YPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhcc-CchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence 8999999999999999999999999999999999999987 2232 22222 1 1111111223345558874333
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVY-------AIIVANFCRSWNFYLLVLFQASYLKSTFHLQI 548 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 548 (744)
++. +|...+.+....+ .+..+.....-..++||++.. .+.+..+.....+..+.++.+.+....+|+++
T Consensus 221 k~~--~~~~~~~~~~~~~--~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss 296 (451)
T KOG2615|consen 221 KRN--DEHSTLQEAADDR--LALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSS 296 (451)
T ss_pred hhc--ccccchhhhhhhh--hhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCCh
Confidence 222 1111111111000 000000011111233443321 22333344444444444444444445689999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy15142 549 QETGFIGSLPHLLMTIVVPCGGMLADHLR 577 (744)
Q Consensus 549 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 577 (744)
.+.|.+.+..++.+.+.+.......+|.+
T Consensus 297 ~~~G~vl~~tGl~m~~~ql~~~~~l~~~~ 325 (451)
T KOG2615|consen 297 MQQGKVLSTTGLLMLVIQLALVPILPRYK 325 (451)
T ss_pred hhheeeeehhhHHHHHHHHhccccccccc
Confidence 99999888887777777776555555544
|
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-14 Score=162.33 Aligned_cols=144 Identities=13% Similarity=0.091 Sum_probs=119.1
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc-cCCchhhHHHHHHHHHHHHHHHHHhhc-ChHHHHHHHHHHhh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR-YPANRIFGTAIACTSFLHLFVPTAIKL-NPGSVIIVRICQGL 393 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~ 393 (744)
+..+++|++.++.+++.+.+........+++|+++|| +|||+++..+.++.+++.++ ++++. +.+.+++.+++.|+
T Consensus 47 yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l--~~~~~~~~~~l~~~~~l~gi 124 (500)
T PRK09584 47 YLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL--VAWSGHDAGIVYMGMATIAV 124 (500)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH--HHHhcccHHHHHHHHHHHHH
Confidence 3457899999988888887776666666789999999 59999999999999988777 44543 45566778899999
Q ss_pred hhhhhhhHHhHHhhhccCccc--hhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHH
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLE--RSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWY 461 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~--Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~ 461 (744)
+.|...+...++++|++|+++ |..+.++++.+.++|..++|.+++++.+++||++.|++.++..++..
T Consensus 125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999888988999999998653 45678889999999999999999999999999999998876544443
|
|
| >KOG0252|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-17 Score=169.10 Aligned_cols=330 Identities=12% Similarity=-0.035 Sum_probs=198.6
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC---C----hhHHHHHHHHHHH
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK---S----EVTATMALCLGVA 202 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~ 202 (744)
+.+.++.++|..+|++++|+++||+ |||.++...+++..++++++++.. + .+++...|++.|+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~----------GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKF----------GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh----------cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhc
Confidence 8899999999999999999999999 777788888888888888777542 1 2567778999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHH----hhhccCC-cccch-------h-hHHHhHhh------
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFIS----YIGRRGK-STMDA-------D-MQQKAIDA------ 262 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~----~~~~~~~-~~~~~-------~-~~~~~~~~------ 262 (744)
|.|+.+|.+.+..+|.+-+ .||...+...+...+|.+.| .++.... ...++ + .|+...-.
T Consensus 157 GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~ 236 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPAL 236 (538)
T ss_pred cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999964 69998776655555544333 2221110 01111 1 12111100
Q ss_pred -----hHhhhhhhchh----hHH---HHH----------------------------HHHhhhhcCCCcceehhhhhhcc
Q psy15142 263 -----TKEGLEKFNIE----REV---ATY----------------------------IKQYFENAYGPYWQCVVGRNFGS 302 (744)
Q Consensus 263 -----~~~~~~~~~~~----~~~---~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~ 302 (744)
+....++...+ ++. ..+ +...+.+.+.++.+......|..
T Consensus 237 ~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFll 316 (538)
T KOG0252|consen 237 LVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLL 316 (538)
T ss_pred HHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 00000000000 000 000 00011011111111111111111
Q ss_pred cccchhhheeeecccccccccCchhhHH--------HHH-HHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHH
Q psy15142 303 YVSFETHYIYFYLGKVKHINWTVAQESA--------VDS-SFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFV 373 (744)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~~-~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~ 373 (744)
-..++. .....-...+.+|+.+..... ... +...+++.|..+...++|++|||++.+.+++++++..+.
T Consensus 317 Diafy~-~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~- 394 (538)
T KOG0252|consen 317 DIAFYG-QNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFV- 394 (538)
T ss_pred hhhhhc-cccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHH-
Confidence 111111 010111112334444443222 111 122233345566778999999999999999999998877
Q ss_pred HHHhhcC----hHHHHHHHHHHh-hhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-----c
Q psy15142 374 PTAIKLN----PGSVIIVRICQG-LVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-----H 443 (744)
Q Consensus 374 ~~~~~~~----~~~~~~~~~l~G-~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-----~ 443 (744)
.+...| -..++++..+.. ++..+.......+.+|.+|++.|+++-|+..+.+-+|++++......+.+ .
T Consensus 395 -~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 395 -IAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred -HcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcc
Confidence 444444 111222222222 22333445577788999999999999999999999999999999999988 7
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 444 FSWEAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 444 ~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
.|.++.+++.+.+.++..+..+++ ||+..
T Consensus 474 ~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~ 502 (538)
T KOG0252|consen 474 IGVRNVFIILAGCMLLGILFTLLI-PETKG 502 (538)
T ss_pred ccchHHHHHHHHHHHHhHheeEEe-ecccc
Confidence 789999999999988887776655 67643
|
|
| >KOG4686|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=147.22 Aligned_cols=248 Identities=13% Similarity=0.100 Sum_probs=177.5
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc-cCCchhhHHHHHHHHHHHHHHH-HHhhcChHHHHHHHHHHhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR-YPANRIFGTAIACTSFLHLFVP-TAIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~~ 395 (744)
..+.+++.++..++.+.|++-.++.++++|++.|| +|-|..-++-++...++-++.. -...+.+|++.++|++.|+|.
T Consensus 71 k~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGg 150 (459)
T KOG4686|consen 71 KLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGG 150 (459)
T ss_pred hcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCc
Confidence 45667777788899999999999999999999997 5877765555555555655522 134567999999999999998
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCch------hH---HHHHHHHHHHHHHHHHh
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWE------AM---FYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~------~~---f~~~~~~~~~~~~~~~~ 466 (744)
-....+.+.|+.-|+..++.+.++|+.....++|..+.-.+.+++.+..+-- .. .+......+..-+....
T Consensus 151 ESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical 230 (459)
T KOG4686|consen 151 ESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL 230 (459)
T ss_pred hhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8788889999999999999999999999999999999988888887753310 01 11111111111111111
Q ss_pred hcccCCCCCCCCChHHHHHHH-HhhcccccccCCCCCCCcHHHHh-hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15142 467 LSFEKPCLHPTISGRELLYIE-KSLGSSVQVAMPTLATTPWREFA-HSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTF 544 (744)
Q Consensus 467 ~~~e~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 544 (744)
.. . ..++..+.+. ++.+...+ .+ + ..+.. -.|++|.+.+.+++.....+-+....|.++++.+
T Consensus 231 ~l-------g-~~D~rAerilh~e~g~~Ge--~p---k--Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rf 295 (459)
T KOG4686|consen 231 SL-------G-LSDDRAERILHLEEGFLGE--EP---K--LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRF 295 (459)
T ss_pred Hh-------h-hhhhHHHHHHhhhcCcccC--Cc---c--cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh
Confidence 10 0 0111111111 11111111 11 1 11111 1488999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 545 HLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 545 g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|+|+..++.+.+.......+.+++.|.++||+|++-
T Consensus 296 GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 296 GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL 331 (459)
T ss_pred CCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee
Confidence 999999999999999999999999999999999984
|
|
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-15 Score=165.73 Aligned_cols=315 Identities=11% Similarity=-0.053 Sum_probs=185.7
Q ss_pred hhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhh-HHhhhhhHHHHHHHHH-Hh----cCC--hh
Q psy15142 121 AKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKL-FNCGGFGMEAFFFVVV-AY----TKS--EV 191 (744)
Q Consensus 121 ~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~-~~~~~~~~~~~~~~~~-~~----~~~--~~ 191 (744)
...|++. +.|++.++..+...+..++.|+++||.++|. |||+ .++++.+...+...+. .. ..+ .+
T Consensus 37 ~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~------Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 37 DVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRW------GKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCC------cCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 4445555 3499999999999999999999999997664 4544 5455544343333332 11 111 12
Q ss_pred HHHHHHHHHHHhhhcccccccccccccCc--chhhHHHHHHhhhhh-----hhhHHHhhhccCCcc-cchhh-HHHhHhh
Q psy15142 192 TATMALCLGVAFSGFAISGYNVNHLDIAP--RYASILMGMSNGIGT-----IDIFISYIGRRGKST-MDADM-QQKAIDA 262 (744)
Q Consensus 192 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p--~~rg~~~g~~~~~~~-----~g~~~~~~~~~~~~~-~~~~~-~~~~~~~ 262 (744)
+..+...+.+++.++..++..++..|+.+ ++|.+..++...+.+ ++.++++++...... ..... .......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 33444556677777777788888888774 368888776654433 344445544322111 11111 1111000
Q ss_pred hH---------h-hhhhhchh---hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhH
Q psy15142 263 TK---------E-GLEKFNIE---REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQES 329 (744)
Q Consensus 263 ~~---------~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 329 (744)
.. . ..++...+ ....+..+..++++ + +.......+..+............+....+|.+....+
T Consensus 191 v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~n~--~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 267 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNR--P-LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTV 267 (448)
T ss_pred HHHHHHHHHHHcCcEeccCCCccCCCHHHHHHHHhCCc--h-HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHH
Confidence 00 0 00010000 01112222333222 1 22111111111211111111111122345666554444
Q ss_pred HHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh--cChHHHHHHHHHHhhhhhhhhhHHhHHhh
Q psy15142 330 AVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK--LNPGSVIIVRICQGLVEGVCYPAVHGIWR 407 (744)
Q Consensus 330 ~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 407 (744)
+......++..++.+++++++||+|+|+++.++.++.+++.++. .+. .+.+.+++..++.|+|.+...+...++.+
T Consensus 268 ~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~ 345 (448)
T PRK09848 268 LVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLF--FWVSVWSLPVALVALAIASIGQGVTMTVMWALEA 345 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444466778889999999999999999999988888777663 332 34566666778889999999999999999
Q ss_pred hccCcc-------chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 408 FWAPPL-------ERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 408 e~~p~~-------~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
|..|.+ .+|...|+.+....+|..+++.+.+.+.+..|+
T Consensus 346 ~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 346 DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 988754 459999999999999999999999988876665
|
|
| >KOG2615|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.2e-16 Score=156.77 Aligned_cols=300 Identities=15% Similarity=0.101 Sum_probs=206.8
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcccc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAIS 209 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 209 (744)
|++.+.+.+++++.++.+|.+|||+ |||+++++|++..++...+.+.+.|+..+++.|+++|+..|- ..
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~y----------GRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~ 139 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRY----------GRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LS 139 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhh----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hH
Confidence 9999999999999999999999999 899999999999999999999999995555569999999885 45
Q ss_pred cccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccc---hhhHHH--h-----Hhhh------Hhhhhhhch
Q psy15142 210 GYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMD---ADMQQK--A-----IDAT------KEGLEKFNI 272 (744)
Q Consensus 210 ~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~--~-----~~~~------~~~~~~~~~ 272 (744)
.+.++++|+.+ ++|+..++.++.+..+|.++||.+.......+ ...... . .... ....|..+.
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~ 219 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPL 219 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 67889999996 57999999999999999999998765544411 000000 0 0000 000011110
Q ss_pred hhH---------HHHH------HH---Hh-hhhcCCCcc-ee---hhhhhhcccccchhhheeeec-ccccccccCchhh
Q psy15142 273 ERE---------VATY------IK---QY-FENAYGPYW-QC---VVGRNFGSYVSFETHYIYFYL-GKVKHINWTVAQE 328 (744)
Q Consensus 273 ~~~---------~~~~------~~---~~-~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~ 328 (744)
+++ ..+. .. +. .-+.+...- .. .++.-...+.-.+..+.+... .....+|+++.+.
T Consensus 220 rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~ 299 (451)
T KOG2615|consen 220 RKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQ 299 (451)
T ss_pred hhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhh
Confidence 000 0000 00 00 001111110 01 111111111111111111111 1246799999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccC--CchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHh
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYP--ANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIW 406 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 406 (744)
|-+.+...++..+.+....+..||.. -+-.+..++.++.-..++ .........+..+..+..+..+...+....++
T Consensus 300 G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~ll--ls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv 377 (451)
T KOG2615|consen 300 GKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLL--LSLARTPVVLYLGSTLKSFSTASVVTCLTSLV 377 (451)
T ss_pred eeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH--HhccccchhhhHHHHHHHHHHHHhhHHHHHHH
Confidence 99888888888888888888888876 555555555555555544 45666677777888888888888888899999
Q ss_pred hhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh
Q psy15142 407 RFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE 442 (744)
Q Consensus 407 ~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~ 442 (744)
....|.++||..+|+......++-++||+++|.+..
T Consensus 378 ~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 378 HKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 999999999999999999999999999999988765
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.5e-14 Score=153.10 Aligned_cols=248 Identities=13% Similarity=0.079 Sum_probs=169.1
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhh----ccCCchhhHHH-HHHHHHHHHHHHHHhhcCh------------
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFAS----RYPANRIFGTA-IACTSFLHLFVPTAIKLNP------------ 381 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~D----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~~------------ 381 (744)
+.+|.+....+++..+..+...+.+++.|+++| |+||||.++++ .+..+++.++ ..++.+.
T Consensus 32 ~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~l--l~~~~~~~~~~~~~~~~~~ 109 (477)
T TIGR01301 32 QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVIL--IGFAADIGHLFGDNLDKKT 109 (477)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHH--HHhCchhhhhccccccccc
Confidence 568999999999999999999999999999999 59999998875 4444455455 3343332
Q ss_pred -----HHHHHHHHHHhhhhhhhhhHHhHHhhhccCccch--hHHHHHHHHHhhhHHHhhHHHHHHh--hhcc--------
Q psy15142 382 -----GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLER--SRLATIAFCGTYAGIVLGLPISAIL--TEHF-------- 444 (744)
Q Consensus 382 -----~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~R--g~~~g~~~~~~~~g~~ig~~i~~~l--~~~~-------- 444 (744)
+..+++..+..++.....+...++++|.+|+++| +.+.++.+....+|+.+|+.+++.. .+.+
T Consensus 110 ~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~ 189 (477)
T TIGR01301 110 KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEAC 189 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccc
Confidence 2223333445557777788889999999998865 6799999999999999999999865 2211
Q ss_pred -----CchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCh-HHHHHHHHhhcccccccCCCCCCCcHHHHhhc-----H
Q psy15142 445 -----SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISG-RELLYIEKSLGSSVQVAMPTLATTPWREFAHS-----M 513 (744)
Q Consensus 445 -----gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~ 513 (744)
+.+..|++.+++.++..++..+..+|.|........ +|. ++..+ ......+++++++ +
T Consensus 190 ~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~i~~~~~~mP~ 258 (477)
T TIGR01301 190 GVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEA-------APPSK----HGEEAFFGELFGAFKYLPR 258 (477)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhc-------ccccc----cchhhhHHHHHHHHHHCCH
Confidence 467889998888888888888888887642211100 010 00000 0011223444432 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh------hH---H-HHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 514 PVYAIIVANFCRSWNFYLLVLFQASYLKS-TFHLQIQ------ET---G-FIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~------~~---~-~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
.++.+++..++..++++.+..|.+.|+.+ .++.++. +. | +......+...+.+++-..+.+++|+|
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~ 335 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77889999999999999999999998874 4554321 11 2 223344455556666777788888754
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >KOG0255|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-14 Score=163.78 Aligned_cols=332 Identities=11% Similarity=-0.002 Sum_probs=203.5
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
..+..+++++|..+|++++|.++||+ |||+++++++++..++.++.++++|++.++++|++.|++.+...
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~----------GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRF----------GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhc----------ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 38889999999999999999999998 89999999999999999999999999999999999999999999
Q ss_pred ccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCC------------------------cccchhhHHHhH-hh
Q psy15142 209 SGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGK------------------------STMDADMQQKAI-DA 262 (744)
Q Consensus 209 ~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~------------------------~~~~~~~~~~~~-~~ 262 (744)
.....+++|+.+ ++|+.+..+.......|.+..+++.+.. .+.+++...... ++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred HHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHH
Confidence 999999999995 6799999983333333322222222211 122222211111 11
Q ss_pred hHhhhhhh--------chhhHHHHH--HHHhhh---hc-C--CCcce---ehhhhhhcccccchhhheeeeccc-ccccc
Q psy15142 263 TKEGLEKF--------NIEREVATY--IKQYFE---NA-Y--GPYWQ---CVVGRNFGSYVSFETHYIYFYLGK-VKHIN 322 (744)
Q Consensus 263 ~~~~~~~~--------~~~~~~~~~--~~~~~~---~~-~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 322 (744)
+.+.+++. ......... .+.... .+ . ...+. .........+..+.....++.+.. ...+|
T Consensus 270 a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg 349 (521)
T KOG0255|consen 270 AIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLG 349 (521)
T ss_pred HHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcC
Confidence 11111111 000000000 000000 00 0 00000 000011111111111222222211 23333
Q ss_pred cCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC--h-HHHHHHHHHHhhhhhhhh
Q psy15142 323 WTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN--P-GSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 323 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~l~G~~~~~~~ 399 (744)
.+. .+................+.+.|++|||.....+.++..++.++. +.... . +...+...+..++.+..+
T Consensus 350 ~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
T KOG0255|consen 350 GNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLF--GWLPDDLGGWLHWILPLLGKFFIGSAF 424 (521)
T ss_pred chH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHhhccchhHHHHHHHHHHHHHHHHHH
Confidence 322 233333333444455556899999999999999999988888774 33332 2 134445555556666667
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHP 476 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~ 476 (744)
.....+.+|.+|+..|..+.+.......+|.+++|.+...... ......+.+.+....+..++..++.||+.....
T Consensus 425 ~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 425 NLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 7779999999999999999999999999999999998765544 222223333455666666666566688865433
|
|
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=161.90 Aligned_cols=320 Identities=11% Similarity=0.024 Sum_probs=189.8
Q ss_pred cccchhhhhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhh-hhHHhhhhhHHHHHHHHHHhcCC--
Q psy15142 114 MKCNLGFAKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVR-KLFNCGGFGMEAFFFVVVAYTKS-- 189 (744)
Q Consensus 114 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gR-k~~~~~~~~~~~~~~~~~~~~~~-- 189 (744)
++.++. ...|.+.. .|++..+..+..++..|+.|+++||...|. || |+.++.+.+..++..++.-..++
T Consensus 32 l~~~~t-~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~------Grrrp~il~~~~~~~i~~~l~f~~p~~~ 104 (444)
T PRK09669 32 LAYFYT-DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH------GQFRPYLLWFAIPFGVVCLLTFYTPDFG 104 (444)
T ss_pred HHHHHH-HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC------CCcchhHHHHHHHHHHHHHHHHhCCCCC
Confidence 333333 44566653 399999999999999999999999986554 45 66777776666666655444432
Q ss_pred ----hhHHHHHHHHHHHhhhcccccccccccccCc--chhhHHHHHHhhhhhhhhHHHhhh-----ccCCcccchhhHHH
Q psy15142 190 ----EVTATMALCLGVAFSGFAISGYNVNHLDIAP--RYASILMGMSNGIGTIDIFISYIG-----RRGKSTMDADMQQK 258 (744)
Q Consensus 190 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p--~~rg~~~g~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~ 258 (744)
.+++.+..++.+.+......+..++.+|+.+ ++|++..++.....++|+.++..+ ...........+..
T Consensus 105 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 105 ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 2344444444455555666677889999985 469999888888888876666432 11110010111110
Q ss_pred hH--hhh---H----hhh---hhhchh----hHHHHHHHHhhhhcCCCcceehhhhhhcccccch--hhheeeecccccc
Q psy15142 259 AI--DAT---K----EGL---EKFNIE----REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFE--THYIYFYLGKVKH 320 (744)
Q Consensus 259 ~~--~~~---~----~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 320 (744)
.. ... . ... ++...+ ....+.++..++++ + ++..+...+....... .....++. ...
T Consensus 185 ~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~--~-~~~l~~~~~~~~~~~~~~~~~~~y~~--~~~ 259 (444)
T PRK09669 185 AMMVMGLLGVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNS--Q-WRIMFIFNVVLLTAVVTRGGATLYYV--NYV 259 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCc--h-HHHHHHHHHHHHHHHHHHhhhhheee--eee
Confidence 00 000 0 000 000000 01122233333222 2 2222222111111111 11111111 111
Q ss_pred cccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhh
Q psy15142 321 INWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYP 400 (744)
Q Consensus 321 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 400 (744)
++ ++...+.+.....+..+++.+++++++||+|+|+.+.++.++.+++.+.+.....++.+.+++..++.|++.+...+
T Consensus 260 ~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 338 (444)
T PRK09669 260 LL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTP 338 (444)
T ss_pred cC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHH
Confidence 22 22333455556667777888899999999999999988877665443332111234566677777889999999999
Q ss_pred HHhHHhhhccCc-------cchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 401 AVHGIWRFWAPP-------LERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 401 ~~~~~~~e~~p~-------~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
..+++++|..+. +..|...|+......+|..+|+.++|.+.+..|+
T Consensus 339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999998862 3346778888899999999999999999887776
|
|
| >KOG2504|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=7e-15 Score=163.13 Aligned_cols=325 Identities=13% Similarity=0.075 Sum_probs=232.0
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHH-HHHHHHhhhcc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMA-LCLGVAFSGFA 207 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~ 207 (744)
.+++.++......+.+++.+.+.||+ |.|.+++.|.++.+++.++.+|+++.|.+++. =++.|+|.|+.
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rf----------g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~ 152 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRF----------GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLI 152 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhc----------CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhh
Confidence 48999999999999999999999999 77778999999999999999999999887775 78889999999
Q ss_pred cccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHH---hH---hh-------hH----------
Q psy15142 208 ISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQK---AI---DA-------TK---------- 264 (744)
Q Consensus 208 ~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~---~~-------~~---------- 264 (744)
+..+..++..+.+++|+.++|+...+..+|.++-+.+.....+...+.... .. .. ..
T Consensus 153 ~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~ 232 (509)
T KOG2504|consen 153 YLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEE 232 (509)
T ss_pred hcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhh
Confidence 999999999999999999999999998887665543322111111110000 00 00 00
Q ss_pred -------------------hhh--hhhchh-----h-HHH------H--HHHH---hhhhc---CCCcceehhhhhhccc
Q psy15142 265 -------------------EGL--EKFNIE-----R-EVA------T--YIKQ---YFENA---YGPYWQCVVGRNFGSY 303 (744)
Q Consensus 265 -------------------~~~--~~~~~~-----~-~~~------~--~~~~---~~~~~---~~~~~~~~~~~~~~~~ 303 (744)
... .....+ . ... . ..+. .++.. .+..+...++..+. +
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~-~ 311 (509)
T KOG2504|consen 233 KDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFA-Y 311 (509)
T ss_pred hhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHH-H
Confidence 000 000000 0 000 0 0000 00000 01111111111111 1
Q ss_pred ccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCC--chhhHHHHHHHHHHHHHHHHHhhcCh
Q psy15142 304 VSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPA--NRIFGTAIACTSFLHLFVPTAIKLNP 381 (744)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Gr--r~~l~~~~~~~~~~~~~~~~~~~~~~ 381 (744)
..+..... +.....+..+.+..+.+.+.++..+...++.+..|+++|+... +.+..++.++.+++.+. ..+.+++
T Consensus 312 ~g~~~p~~-~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~--~p~~~~~ 388 (509)
T KOG2504|consen 312 LGFNVPFV-YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLF--LPFATTY 388 (509)
T ss_pred HHHHHHHH-HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH--HHHhccH
Confidence 11111111 1111235789999999999999999999999999999999984 44555666666666655 5678899
Q ss_pred HHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHH
Q psy15142 382 GSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLW 460 (744)
Q Consensus 382 ~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~ 460 (744)
+.++...++.|++.|.........+.|+.+.++-..+.|+...+..++..+||.++|.+.+..| |...|+++++..++.
T Consensus 389 ~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s 468 (509)
T KOG2504|consen 389 VGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLS 468 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHH
Confidence 9999999999999999988888899999999999999999999999999999999999988777 999999999998888
Q ss_pred HHHHHhh
Q psy15142 461 YLCWLWL 467 (744)
Q Consensus 461 ~~~~~~~ 467 (744)
.+++++.
T Consensus 469 ~~~~~~~ 475 (509)
T KOG2504|consen 469 AVLLLIL 475 (509)
T ss_pred HHHHHHh
Confidence 7776655
|
|
| >KOG1330|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.8e-16 Score=159.86 Aligned_cols=309 Identities=13% Similarity=0.021 Sum_probs=191.2
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcc
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFA 207 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 207 (744)
..|++.....+...+.+|++|+|+||++ ||.++.+|..+.+++.++++++..+|+++++|.+.|+|-+..
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryN----------R~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~ 138 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYN----------RKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASY 138 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcC----------cceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence 3499999999999999999999999994 566888999999999999999999999999999999999999
Q ss_pred cccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh----------hhHhhhh-hhch---
Q psy15142 208 ISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID----------ATKEGLE-KFNI--- 272 (744)
Q Consensus 208 ~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~--- 272 (744)
.+.++++++|..|. +|++++++++++..+|..+|.++.........++++ +.. ....... +++.
T Consensus 139 ~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~-af~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 139 SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW-AFRGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE-EEEeehHHHHHHHHHHHhhccCcccccc
Confidence 99999999999996 699999999999999999998766655555443211 110 0000000 0100
Q ss_pred -----hh----HHHHHHHHhhhh-cCCCcceehhhhhhcccccchhhheeeeccc--ccccccCchhhHHHHHHHHHHHH
Q psy15142 273 -----ER----EVATYIKQYFEN-AYGPYWQCVVGRNFGSYVSFETHYIYFYLGK--VKHINWTVAQESAVDSSFFWGYL 340 (744)
Q Consensus 273 -----~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~s~~~~~~~~~~~~~~~~ 340 (744)
+. .....+++.... +........+......+..+...+..+.... .+-.|.+..+..++..+...+..
T Consensus 218 ~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~ 297 (493)
T KOG1330|consen 218 DEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGS 297 (493)
T ss_pred cccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhch
Confidence 00 001112221111 0011112223332233333332222221111 12233445555667778888899
Q ss_pred HhhhhhHHhhhcc----CC---chhhHHHHHHH---HHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh-hhHHhHHhhhc
Q psy15142 341 ITQVPGGFFASRY----PA---NRIFGTAIACT---SFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC-YPAVHGIWRFW 409 (744)
Q Consensus 341 ~~~~~~g~l~Dr~----Gr---r~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~~~~e~ 409 (744)
+|.+++|.++||+ .+ .++-.+...+. ++..+.+......+...+.+..++.|...... .....-+..|.
T Consensus 298 lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~v 377 (493)
T KOG1330|consen 298 LGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEV 377 (493)
T ss_pred hhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEe
Confidence 9999999999993 22 22211111111 11111110112222222333444555544333 34455567899
Q ss_pred cCccchhHHHHHHHHHhh-hHHHhhHHHHHHhhhc-cCch
Q psy15142 410 APPLERSRLATIAFCGTY-AGIVLGLPISAILTEH-FSWE 447 (744)
Q Consensus 410 ~p~~~Rg~~~g~~~~~~~-~g~~ig~~i~~~l~~~-~gw~ 447 (744)
.|+++|.++.++-..... +|-.-+|.+.|.+.++ .||+
T Consensus 378 V~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 378 VPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred cCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 999999999999885544 5556667688888875 4665
|
|
| >KOG2532|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-15 Score=162.99 Aligned_cols=333 Identities=12% Similarity=0.052 Sum_probs=208.6
Q ss_pred cccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC--ChhHHHHHHHHH
Q psy15142 124 QFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK--SEVTATMALCLG 200 (744)
Q Consensus 124 ~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 200 (744)
.++. ++|++.+..+.|+.++.+.+|+++||+ |-|+++..+.++.++.+++.+++. +.+.++++|+++
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~----------G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lq 138 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKF----------GARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQ 138 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc----------CchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHh
Confidence 3443 459999999999999999999999999 555577888999999999999764 455678899999
Q ss_pred HHhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHh-hhccCCcccchhhHHHh-Hh---h----h--Hhhhh
Q psy15142 201 VAFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISY-IGRRGKSTMDADMQQKA-ID---A----T--KEGLE 268 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~---~----~--~~~~~ 268 (744)
|++.|...++...+.+.++| ++|++..++...+..+|.+++. +........-.|....- .. . . .-..+
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999998 5899999999999988887774 33333222122211100 00 0 0 00000
Q ss_pred hhch----hhHHHHHHHHhhh----h-----cC------CCcceehhhhhhcccccchhhheeeecccccccccCchhhH
Q psy15142 269 KFNI----EREVATYIKQYFE----N-----AY------GPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQES 329 (744)
Q Consensus 269 ~~~~----~~~~~~~~~~~~~----~-----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 329 (744)
++.. .++..+.+.+... + ++ ...|.+ ....++....+.....+.+.++.+-+|++..+.|
T Consensus 219 ~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai-~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G 297 (466)
T KOG2532|consen 219 SPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAI-WISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETG 297 (466)
T ss_pred CcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhh
Confidence 0000 0011111111000 0 00 011222 2222333333333344444455677899999999
Q ss_pred HHHHHHHHHHHHhhhhhHHhhhccCCc--------hhh-HHHHHHHHHHHHHHHHHhhcC-hHHHHHHHHHHhhhhhhhh
Q psy15142 330 AVDSSFFWGYLITQVPGGFFASRYPAN--------RIF-GTAIACTSFLHLFVPTAIKLN-PGSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 330 ~~~~~~~~~~~~~~~~~g~l~Dr~Grr--------~~l-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~~~ 399 (744)
++.++-.+...+..+++|.++||.-+| |++ .++....+++.+. .++.++ .....+..+..+.+..+..
T Consensus 298 ~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~--l~~~~~~~~~~a~~~l~~~~~~~g~~ 375 (466)
T KOG2532|consen 298 FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLV--LAFTSDEHRLLAVILLTIAIGLSGFN 375 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHe--eeecCCCcchHHHHHHHHHHHHcccc
Confidence 999999999999999999999998653 222 2333333443433 333332 1111111112222222221
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh---ccCchhHHHHHHHHHHHHHHHHHhhcc
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE---HFSWEAMFYFYGCMGLLWYLCWLWLSF 469 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~---~~gw~~~f~~~~~~~~~~~~~~~~~~~ 469 (744)
............++.-+..+|+.+....+.++++|.+.+.+.. .-.|+..|++.+++.++..++..++..
T Consensus 376 ~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 376 ISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred hhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 1111111222145777999999999999999999999999884 246999999999998888766655543
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=149.27 Aligned_cols=324 Identities=13% Similarity=0.040 Sum_probs=218.3
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCC--hh-HHHHHHHHHHHhhhc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS--EV-TATMALCLGVAFSGF 206 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~g~ 206 (744)
|...++..+..++-+++-|.++|+.|+ ||+.+-+...+..+++.+..++++ .+ ..+++..+..++...
T Consensus 61 gy~~aia~llia~LapiLG~iaD~~g~---------Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~ 131 (438)
T COG2270 61 GYASAIAGLLIALLAPILGTIADYPGP---------RKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEF 131 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCC---------cchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcch
Confidence 888899999999999999999999865 444565666666777777776655 43 444567777888888
Q ss_pred ccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC----------------cccchhhH---------HHhH
Q psy15142 207 AISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK----------------STMDADMQ---------QKAI 260 (744)
Q Consensus 207 ~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~----------------~~~~~~~~---------~~~~ 260 (744)
......+++.++.++ +.|+..++....+.+|+++..+..... +.-..... |+..
T Consensus 132 s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li 211 (438)
T COG2270 132 SNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLL 211 (438)
T ss_pred hheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHH
Confidence 888899999999976 588888888888888777664432100 00010000 0000
Q ss_pred hhh---Hhhhhhh----chhhHHHHHHHH---hhhhc-CCCcceehhhhhhcccccchhhheeeecccccccccCchhhH
Q psy15142 261 DAT---KEGLEKF----NIEREVATYIKQ---YFENA-YGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQES 329 (744)
Q Consensus 261 ~~~---~~~~~~~----~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 329 (744)
... ....+.. +..+.....+++ .+++- .++.....+...+...+...+.......+...++|++..+..
T Consensus 212 ~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~ll 291 (438)
T COG2270 212 FALPMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELL 291 (438)
T ss_pred HHhHHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHH
Confidence 000 0000000 111111111221 11111 111222222222222333233333333344568999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhc
Q psy15142 330 AVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFW 409 (744)
Q Consensus 330 ~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~ 409 (744)
++....++..++|++++|+|.||+|.|++++.++++..+..+. ..+......++++..+.|+..|+.+...-+|.++.
T Consensus 292 l~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~--~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~l 369 (438)
T COG2270 292 LIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALY--LIFLEGELDFWILGLLVGTSLGGAQASSRSYLARL 369 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHH--HHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988777766 33444555677777899999999999999999999
Q ss_pred cCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHH
Q psy15142 410 APPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCW 464 (744)
Q Consensus 410 ~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~ 464 (744)
+|+++-++.+|+++.....+..+||++.+.+.+..| -|..+....++.++.+++.
T Consensus 370 vp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 370 VPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred CCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 999999999999999999999999999999887654 5666655555554444443
|
|
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-13 Score=143.42 Aligned_cols=251 Identities=14% Similarity=0.052 Sum_probs=158.2
Q ss_pred eecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHH--HHHHHHHHh----hcChH-HHH
Q psy15142 313 FYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSF--LHLFVPTAI----KLNPG-SVI 385 (744)
Q Consensus 313 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~--~~~~~~~~~----~~~~~-~~~ 385 (744)
..+...+..|++.+++|.+.++..+...+.+++.|.++||+|.||-++....+..+ +.... ..+ ..|.+ ..+
T Consensus 30 ~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~-~v~~pll~~n~~lg~i 108 (412)
T PF01306_consen 30 FPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI-YVFGPLLQSNFWLGAI 108 (412)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH-HTHHHHHHTT-HHHHH
T ss_pred HHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 33444556899999999999999999999999999999999977766544433222 21111 111 22332 233
Q ss_pred HHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 386 IVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 386 ~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
++.+..|++.....|+..+|+.++. ++.+.-.|-....+++|.+++..++|.+.+. +-+..|++....+++..++.+
T Consensus 109 ig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~ 185 (412)
T PF01306_consen 109 IGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLL 185 (412)
T ss_dssp HTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHH
Confidence 3444456666666777777776654 4445566777788999999999999998864 456777776666655555555
Q ss_pred hhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q psy15142 466 WLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTF- 544 (744)
Q Consensus 466 ~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~- 544 (744)
+..|+.+++....+.++. +.++.......+++|+|++|.+.+........+..+....+.|+...+
T Consensus 186 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~ 252 (412)
T PF01306_consen 186 LLKPDVPPQAEVADALGA-------------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQ 252 (412)
T ss_dssp SS---SSSSS-SSTTSSS-------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HcCCcCchhhhhhccccc-------------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 554444333221111000 000001123457889999998887777766777777777888887532
Q ss_pred --CCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 545 --HLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 545 --g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.+....|.+.+...+..++.-.+..++.+|+|.|+
T Consensus 253 ~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~ 290 (412)
T PF01306_consen 253 SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN 290 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh
Confidence 223345677777778888888999999999999885
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.5e-14 Score=156.96 Aligned_cols=245 Identities=8% Similarity=-0.050 Sum_probs=162.7
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhh----ccCCc-hhhHHHHHHHHHHHHHHHHHhhc----C--hHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFAS----RYPAN-RIFGTAIACTSFLHLFVPTAIKL----N--PGSVII 386 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~D----r~Grr-~~l~~~~~~~~~~~~~~~~~~~~----~--~~~~~~ 386 (744)
.+.+|+++..+|.+..+.-+.-++..++.|+++| |+||| +.++++.+.++++..++ ...+ + +..+++
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll--f~~p~~~~~~~~~~~~~ 111 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL--FSAHLFEGTAQYVFVCV 111 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH--HcCCCCCccHHHHHHHH
Confidence 4667999999999999999999999999999999 66995 55566777767665552 2212 1 223444
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhcc-CccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-------cCchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWA-PPLERSRLATIAFCGTYAGIVLGLPISAILTEH-------FSWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~-p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-------~gw~~~f~~~~~~~~ 458 (744)
..++.+++.........++.+|+. ++++|.+..++-..+..+|+.+++.+...+.+. .+|+....+.+++.+
T Consensus 112 ~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~ 191 (473)
T PRK10429 112 TYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFI 191 (473)
T ss_pred HHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 455667777777777889999998 589999999987777777766666555443222 245555555555555
Q ss_pred HHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
++.++.++..+|.+........+ +++...+..++.+++|++++.+++..++..........+.+.
T Consensus 192 ~~~~~~~~~~~e~~~~~~~~~~~---------------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y 256 (473)
T PRK10429 192 VSTIITLRNVHEVYSSDNQVSAE---------------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIY 256 (473)
T ss_pred HHHHHHHcCceecCCcccccccc---------------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 55545544445543211100000 000011223455678898888777777777766666666666
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|++...+ +....+.+.....++.+++.++.+++.||+|+|+
T Consensus 257 ~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 257 YFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 6554333 4555666666667888999999999999999884
|
|
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.8e-14 Score=154.91 Aligned_cols=242 Identities=15% Similarity=0.145 Sum_probs=184.7
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhh----ccCCchhhH-HHHHHHHHHHHHHHHHhh-c-------ChHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFAS----RYPANRIFG-TAIACTSFLHLFVPTAIK-L-------NPGSV 384 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~D----r~Grr~~l~-~~~~~~~~~~~~~~~~~~-~-------~~~~~ 384 (744)
.+.+|+++...|++..+..+..++..++.|.++| |+||||.++ ++.+..+++..++ ... + ....+
T Consensus 29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~ll--f~~~p~~~~~~~~~~~~ 106 (428)
T PF13347_consen 29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLL--FSPPPAGLSFTAKLVWL 106 (428)
T ss_pred HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHh--hccccchhhhhhHHHHH
Confidence 4667999999999999999999999999999999 899777654 5677777777663 222 2 12234
Q ss_pred HHHHHHHhhhhhhhhhHHhHHhhhccC-ccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-------CchhHHHHHHHH
Q psy15142 385 IIVRICQGLVEGVCYPAVHGIWRFWAP-PLERSRLATIAFCGTYAGIVLGLPISAILTEHF-------SWEAMFYFYGCM 456 (744)
Q Consensus 385 ~~~~~l~G~~~~~~~~~~~~~~~e~~p-~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-------gw~~~f~~~~~~ 456 (744)
.+..++..++.........++.+|..+ +++|.+..++-..+..+|..+...+.+.+.+.. +|++..++.+++
T Consensus 107 ~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv 186 (428)
T PF13347_consen 107 FVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIV 186 (428)
T ss_pred HHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHH
Confidence 556666788888888888999999997 578999999999999999877777777665432 588888888888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 457 GLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQ 536 (744)
Q Consensus 457 ~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (744)
.++..++..+..+|++++.. ..+++......++.+++||+++.+.+..++...+........
T Consensus 187 ~~v~~~i~~~~~ke~~~~~~------------------~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~ 248 (428)
T PF13347_consen 187 GLVFFLITFFFVKERSVEVT------------------EQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFL 248 (428)
T ss_pred HHHHhhhhhheeeecccccc------------------ccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHH
Confidence 88777777777666211110 000111224457888999999988888888888888888888
Q ss_pred HHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 537 ASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 537 p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.|.+...|.+ ...+.+.....++.+++.++.++++||+|+|+
T Consensus 249 ~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~ 291 (428)
T PF13347_consen 249 PYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK 291 (428)
T ss_pred HHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee
Confidence 88888877766 55667777888999999999999999999986
|
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=161.66 Aligned_cols=345 Identities=13% Similarity=-0.003 Sum_probs=202.0
Q ss_pred Eeeccccchhhhhhcccccc-cccccchHHHHHHHHHHHHHHHHH-HHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc
Q psy15142 110 ISFGMKCNLGFAKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADH-LRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT 187 (744)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr-~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~ 187 (744)
+..+++.|+. ..+|++... +.+.+..........+++|+++|| + |||+.++++.++.+++..+++++
T Consensus 40 ~~~~l~~yl~-~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~----------G~r~~~~~g~~~~~ig~~l~~~~ 108 (500)
T PRK09584 40 LQGIMAVYLV-KQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVL----------GTKRVIMLGAIVLAIGYALVAWS 108 (500)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------chHHHHHHHHHHHHHHHHHHHHh
Confidence 3334555543 445665533 566555555555556799999999 6 67778889999999998888887
Q ss_pred C-ChhHHHHHHHHHHHhhhcccccccccccccCcc---hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh--
Q psy15142 188 K-SEVTATMALCLGVAFSGFAISGYNVNHLDIAPR---YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID-- 261 (744)
Q Consensus 188 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~---~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 261 (744)
+ +.+.+.+.+.+.+++.|...+...+++.|..|+ +|+..+++++++.++|+++++.+.....+...+.......
T Consensus 109 ~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 109 GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 5 445566678899999998888888899998863 2556788889999999988876543332211111100000
Q ss_pred ----------hhHhhhhhh--chh---hHHHH--------------------------------------H-HHHhh--h
Q psy15142 262 ----------ATKEGLEKF--NIE---REVAT--------------------------------------Y-IKQYF--E 285 (744)
Q Consensus 262 ----------~~~~~~~~~--~~~---~~~~~--------------------------------------~-~~~~~--~ 285 (744)
......++. ..+ .+... . ..... +
T Consensus 189 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (500)
T PRK09584 189 GMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMK 268 (500)
T ss_pred HHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 000000000 000 00000 0 00000 0
Q ss_pred hcCCCcceehhhhhhcccccchhhheeeecc--c--cc-----ccccCchhhHHHHHHHHHHHHHhhhhh----HHhhhc
Q psy15142 286 NAYGPYWQCVVGRNFGSYVSFETHYIYFYLG--K--VK-----HINWTVAQESAVDSSFFWGYLITQVPG----GFFASR 352 (744)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-----~~g~s~~~~~~~~~~~~~~~~~~~~~~----g~l~Dr 352 (744)
+..+++....+..+ .....+...+...... . .+ ..|+. ...+++.++..+...+..++. +++.+|
T Consensus 269 ~~~~~~~~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r 346 (500)
T PRK09584 269 GAARRKMIVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNKMGDR 346 (500)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC
Confidence 00011111111111 1111111111111111 0 01 11211 124556666665555555554 666777
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHhh-------cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHH
Q psy15142 353 YPANRIFGTAIACTSFLHLFVPTAIK-------LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG 425 (744)
Q Consensus 353 ~Grr~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~ 425 (744)
++..+.+.+|.++.+++.+.++.+.. -+.+.++...++.|+|.....|...+++.+..|++.||+++|++...
T Consensus 347 ~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~ 426 (500)
T PRK09584 347 LPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLT 426 (500)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 77778888999999988877432221 12457888899999999999999999999999999999999988877
Q ss_pred hhhHHHhhHHHHHHhh----------hccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 426 TYAGIVLGLPISAILT----------EHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~----------~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
..+|..++..+..... ...+..+.|...++.++++.++.+..
T Consensus 427 ~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 427 TAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777766654221 01135677777777666555444443
|
|
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-12 Score=143.34 Aligned_cols=146 Identities=12% Similarity=0.099 Sum_probs=118.2
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-CCchhhHHHHHHHHHHHHHHHHHhhc-ChHHHHHHHHHHhh
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY-PANRIFGTAIACTSFLHLFVPTAIKL-NPGSVIIVRICQGL 393 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~ 393 (744)
+..+++|+++.+.+.+.+.+.+...++++++|+++||+ ||||++.++.++.+++.++ .+... +...+.+...+.++
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ll--l~~~~~~~~~~~l~l~li~i 112 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV--LGASEIHPSFLYLSLAIIVC 112 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHH--HHHhhcchhHHHHHHHHHHH
Confidence 33566899999999999999999999999999999999 9999999999999888766 33322 22333444445556
Q ss_pred hhhhhhhHHhHHhhhccCcc--chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q psy15142 394 VEGVCYPAVHGIWRFWAPPL--ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~--~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 463 (744)
|.|...+...++++|.+|++ +|.++.++.+.+.++|+.++|.+.+++.+.+||++.|.+.++..++.++.
T Consensus 113 G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 113 GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 66667777889999999976 79999999999999999999999999999999999999877654444333
|
|
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-14 Score=151.62 Aligned_cols=331 Identities=15% Similarity=0.115 Sum_probs=193.1
Q ss_pred hhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 121 AKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 121 ~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
...|++. |.|++.++..+...++.+++|+++||..+ +|+.+.+..++.++...+..+.+++++++++.++
T Consensus 30 ~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~---------~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l 100 (400)
T PF03825_consen 30 ESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGS---------AKRILALLSLLSALALLLLAFSSSFWWLFVIMLL 100 (400)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhh---------HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3346665 45999999999999999999999999853 4446666666677777777778888877777666
Q ss_pred HHHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhh----ccCCcccchh-hHHHhH---h--hhHhh--h
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIG----RRGKSTMDAD-MQQKAI---D--ATKEG--L 267 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~----~~~~~~~~~~-~~~~~~---~--~~~~~--~ 267 (744)
..+......|-..++..+...+ ++.-.|-....+++|-+++.+. .......... ...... . ..... +
T Consensus 101 ~~~~~~p~~pl~dsi~~~~~~~-~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~l 179 (400)
T PF03825_consen 101 FSFFFSPTMPLSDSIALSYLGD-RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFL 179 (400)
T ss_pred HHHHHccHHHHHHHHHHHHccc-ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhC
Confidence 6666555555555555554421 1122222222222222222100 0011111110 000000 0 00000 0
Q ss_pred hhhch----hhHHH----HHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccc-cCchhhHHHHHHHHHH
Q psy15142 268 EKFNI----EREVA----TYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHIN-WTVAQESAVDSSFFWG 338 (744)
Q Consensus 268 ~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~ 338 (744)
.+.+. +...+ ....+.++++ .....+...+.........+.+...+ -++.| .+....+.+.++..+.
T Consensus 180 p~~~~~~~~~~~~~~~~~~~~~~llk~~---~~~~Fll~~~l~~~~~~~~~~f~~~y-l~~~gg~~~~~~g~~~~l~~~a 255 (400)
T PF03825_consen 180 PKTPPKRSAKESVKKLLGLDALKLLKNP---RFLVFLLAAFLIGISHAAYYTFFSIY-LQELGGYSGSTIGILWALGVVA 255 (400)
T ss_pred CCCccccccCCCcccccchHHHHHhcCc---cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcccchhhHHHHHHHHHHHH
Confidence 01000 00000 1111222221 12222222222222222222222222 24455 5666667776766677
Q ss_pred HHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh-cChHHHHHH----HHHHhhhhhhhhhHHhHHhhhccCcc
Q psy15142 339 YLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK-LNPGSVIIV----RICQGLVEGVCYPAVHGIWRFWAPPL 413 (744)
Q Consensus 339 ~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~l~G~~~~~~~~~~~~~~~e~~p~~ 413 (744)
=++.-...+++..|+|.|++++++.+..++=..+ .+.. ++.+...+. ..+.|+..+..+.....|+.+.+|++
T Consensus 256 Ei~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l--~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~ 333 (400)
T PF03825_consen 256 EIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLL--YAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE 333 (400)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH--HHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc
Confidence 7777788999999999999999999998887776 4444 444433333 34699999999999999999999999
Q ss_pred chhHHHHHHHH-HhhhHHHhhHHHHHHhhhccCch------hHHHHHHHHHHHHHHHHHhh
Q psy15142 414 ERSRLATIAFC-GTYAGIVLGLPISAILTEHFSWE------AMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 414 ~Rg~~~g~~~~-~~~~g~~ig~~i~~~l~~~~gw~------~~f~~~~~~~~~~~~~~~~~ 467 (744)
.|+++.+++.. ..++|..+|.+++|++.+++|-+ ..+.+.+++.++..++.+++
T Consensus 334 ~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 334 LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999885 57899999999999999987644 34455555554544444444
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.2e-14 Score=156.13 Aligned_cols=316 Identities=9% Similarity=-0.041 Sum_probs=189.1
Q ss_pred hhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhh-hhHHhhhhhHHHHHHHHHHhcCC------hhH
Q psy15142 121 AKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVR-KLFNCGGFGMEAFFFVVVAYTKS------EVT 192 (744)
Q Consensus 121 ~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gR-k~~~~~~~~~~~~~~~~~~~~~~------~~~ 192 (744)
...|.+.. .|.+..+.-+..++..|+.|+++||...|. || |+.++++....+++..++-..++ .++
T Consensus 35 ~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~------Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 35 DVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW------GKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC------CCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 44556553 399999999999999999999999874443 44 77888888777777555543322 223
Q ss_pred HHHHHHHHHHhhhcccccccccccccCc--chhhHHHHHHhhhhhhhhHHHhhhcc-C---Ccccchhh-HHHh-H-hh-
Q psy15142 193 ATMALCLGVAFSGFAISGYNVNHLDIAP--RYASILMGMSNGIGTIDIFISYIGRR-G---KSTMDADM-QQKA-I-DA- 262 (744)
Q Consensus 193 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p--~~rg~~~g~~~~~~~~g~~~~~~~~~-~---~~~~~~~~-~~~~-~-~~- 262 (744)
+.+..++..++..+...+..++..|+++ ++|.++.++.....++|+++...+.. . ........ .... . ..
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 4444455566666777888899999994 46999999877777776444422111 0 01111110 0100 0 00
Q ss_pred ------hHh---hhhhhc-h----hhHHHHHHHHhhh--hcCCCcceehhhhhhcccccchh--hheeeecccccccccC
Q psy15142 263 ------TKE---GLEKFN-I----EREVATYIKQYFE--NAYGPYWQCVVGRNFGSYVSFET--HYIYFYLGKVKHINWT 324 (744)
Q Consensus 263 ------~~~---~~~~~~-~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~s 324 (744)
... ..++.. . +++.+..+++.++ .++ +.++..+...+........ .+..++. ....+ +
T Consensus 189 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~ll~~~~~~~~~~~~~~~~~~y~~--~y~~~-~ 264 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKN-DQLSCLLGMALAYNIASNIINGFAIYYF--TYVIG-D 264 (473)
T ss_pred HHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHhhheeeEE--EEECC-C
Confidence 000 001100 0 0000011222221 112 2233333222222222221 1111111 11122 3
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH---hhcChHHHHHHHHHHhhhhhhhhhH
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA---IKLNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.+..... ...+.+.+++..++.|++.+...+.
T Consensus 265 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~ 344 (473)
T PRK10429 265 ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVL 344 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777778888999999999999999999988887766555442111 1234556666777889999989999
Q ss_pred HhHHhhhccC-------ccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 402 VHGIWRFWAP-------PLERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 402 ~~~~~~e~~p-------~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
..++++|..+ .+..|...|.......+|..+++.+.|.+.+..|+
T Consensus 345 ~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 345 QVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999965 23346688888899999999999999998876665
|
|
| >KOG2563|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=143.10 Aligned_cols=276 Identities=13% Similarity=0.110 Sum_probs=196.5
Q ss_pred hcCCCcceehhhhhhcccccchhhheeeec--ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHH
Q psy15142 286 NAYGPYWQCVVGRNFGSYVSFETHYIYFYL--GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAI 363 (744)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~ 363 (744)
+-+++||.+++...+..+.+......|... .....+| +....-|...+|++.++...+++-|+.|++|-|..++++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 457788988877777666554432222222 1124456 5666779999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc------ChH--HHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHH
Q psy15142 364 ACTSFLHLFVPTAIKL------NPG--SVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLP 435 (744)
Q Consensus 364 ~~~~~~~~~~~~~~~~------~~~--~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~ 435 (744)
.+.+++..+ -..+. .++ ....+..+.+..+-.......-+..-|||+++|+.+..+...++.+|.+++.+
T Consensus 117 ~ln~iGa~I--r~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 117 VLNGIGAWI--RLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHH--hhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999877 33322 233 44456666666655555555567788999999999999999999999999999
Q ss_pred HHHHhhhcc------Cchh--HHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHH
Q psy15142 436 ISAILTEHF------SWEA--MFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWR 507 (744)
Q Consensus 436 i~~~l~~~~------gw~~--~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (744)
+.+.+..+- .|.. .|+...+++.+.+++..+..+++|+..+........ ......+.+
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~--------------~~~f~~si~ 260 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ--------------DASFPKSIK 260 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh--------------cCcHHHHHH
Confidence 888876542 3543 344444444444444445545555443322211110 011244678
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 508 EFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 508 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
+.++++++....+.+......++++.+.+-..+.. .|++...+|.......++++++.++.|.+.||.+.-
T Consensus 261 ~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 261 SCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred HHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 89999999988888888888888887776655544 478888899999999999999999999999998765
|
|
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.1e-14 Score=152.39 Aligned_cols=324 Identities=13% Similarity=-0.012 Sum_probs=180.2
Q ss_pred cccccc-ccc--ccchHHHHHHHHHHH-HHHHHHHHHhCCcccchhhhhHHhhhh-hHHHHHHHHHH---hcCC-hhHHH
Q psy15142 124 QFEGRT-GFI--GSLPHLLMTIVVPCG-GMLADHLRKKGILSTTMVRKLFNCGGF-GMEAFFFVVVA---YTKS-EVTAT 194 (744)
Q Consensus 124 ~~~~~~-g~~--~~~~~~~~~~g~~~~-G~lsDr~~~r~~l~~~~gRk~~~~~~~-~~~~~~~~~~~---~~~~-~~~~~ 194 (744)
|.+.+. |++ .+++++..++.+++. ++.+||+ |||+..++++ ++.+......+ ...+ ..+++
T Consensus 32 g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~----------g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 32 GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL----------GRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC----------CcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 555544 886 477888887777777 4467776 4444433332 22222222222 2222 22333
Q ss_pred HHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHH---HhH-h---hhH--
Q psy15142 195 MALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQ---KAI-D---ATK-- 264 (744)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~-~---~~~-- 264 (744)
.+..+..+......+...++..|..++ +++...+....+..+|.+++........+...+... ... . ...
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444555555565554 467777777777777777775422111111111100 000 0 000
Q ss_pred hhhhhhch--h--hHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHH-HH
Q psy15142 265 EGLEKFNI--E--REVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFW-GY 339 (744)
Q Consensus 265 ~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~ 339 (744)
...++.+. + +......++.++++ ..+.... ..+.........+.+...+. .+.|+++++.+++.....+ ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~-~~~l~~~~~~~~~~~~~~~l-~~~G~s~~~ig~~~~~~~~~~~ 257 (390)
T TIGR02718 182 WLKDRAVASPEAPLARRASLFRFFRRP--LAWSLLA-LALLSAMTAVSGFGLSKLYL-VDAGWPLEWIGRLGMAGGAVTV 257 (390)
T ss_pred HcCCCCcCccccchhhHHHHHHHHcCc--CHHHHHH-HHHHHHHHHHHHHHHhhHHH-HhcCCCHHHHHHHHhHHHHHHH
Confidence 00011100 0 01111222333222 1222222 22222222222222222222 4579999999998887764 56
Q ss_pred HHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh-----hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCc-c
Q psy15142 340 LITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI-----KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPP-L 413 (744)
Q Consensus 340 ~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~-~ 413 (744)
.++.++.|++.||+|+|+++..+.++.++..+.. ... ..+...++...++.+++.+...+...++..+..++ +
T Consensus 258 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (390)
T TIGR02718 258 LLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW-FAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD 336 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 6778899999999999999888776653333221 111 12233334444555666777777788887777776 8
Q ss_pred chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHH
Q psy15142 414 ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYL 462 (744)
Q Consensus 414 ~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~ 462 (744)
.+++.+++.+...++|..++|.++|.+.+..|++..|+..+++.++..+
T Consensus 337 ~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 337 QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999887776665543
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-11 Score=137.06 Aligned_cols=240 Identities=14% Similarity=0.108 Sum_probs=177.3
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHH-HHHHHHHHHhhc-ChHHHHHHHHHHhhhhhhhhhHHhHH
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTS-FLHLFVPTAIKL-NPGSVIIVRICQGLVEGVCYPAVHGI 405 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~ 405 (744)
.++..++..+..++..++.|-++|+-|+||.++..+.+.+ ++..++ ....+ +++...+..++.-++.+......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l-~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALL-WFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHH-HHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888889999999999988887766555444 344442 22233 34444445555666777778889999
Q ss_pred hhhccCccch--------------------------hHHHHHHHHHhhhHHHhhHHHHHHhhhc--------cCchhHHH
Q psy15142 406 WRFWAPPLER--------------------------SRLATIAFCGTYAGIVLGLPISAILTEH--------FSWEAMFY 451 (744)
Q Consensus 406 ~~e~~p~~~R--------------------------g~~~g~~~~~~~~g~~ig~~i~~~l~~~--------~gw~~~f~ 451 (744)
+.|+.+++.+ ++..+.....+++|+++.-.+.-.+... ...|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999988 9999999999999999887776554322 23477888
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHH
Q psy15142 452 FYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYL 531 (744)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 531 (744)
+.++..++..+..+++.|+.|+.+....... .+....++ ....++++.+.|.+...++++++..-+...
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~--~~~~g~~~---------l~~t~k~~~~~~~~~~fLia~~l~~dg~~t 299 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSS--YLRFGFKR---------LWRTFKEIRKLRQLFLFLIAYFLYSDGVNT 299 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchh--HHHHHHHH---------HHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 8888877777777777788765321111111 11111000 122456667778888889999999999999
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 532 LVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 532 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
+......|.++.+|++..+...+..+..+.+++|.++.|++.||+|.|
T Consensus 300 i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 300 IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999988999999999999999999999999999999999988
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.9e-13 Score=149.60 Aligned_cols=240 Identities=10% Similarity=-0.014 Sum_probs=160.6
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc----cCCchh-hHHHHHHHHHHHHHHHHHhhcC------hHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR----YPANRI-FGTAIACTSFLHLFVPTAIKLN------PGSVII 386 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 386 (744)
.+.+|+++...|.+.++..+..++..++.|+++|| +||||. ++.+.+..+++.+++ ...++ ...+++
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~--f~~p~~~~~~~~~~~~~ 114 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT--FYTPDFGATGKIIYACV 114 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH--HhCCCCCcchHHHHHHH
Confidence 46789999999999999999999999999999999 787554 556666666666542 22222 234444
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhcc-CccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-------ccCchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWA-PPLERSRLATIAFCGTYAGIVLGLPISAILTE-------HFSWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~-p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-------~~gw~~~f~~~~~~~~ 458 (744)
..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..||+..+.+.+++++
T Consensus 115 ~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~ 194 (444)
T PRK09669 115 TYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGV 194 (444)
T ss_pred HHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 555666666666666778999988 56889999898888888888888766554433 2367777777777776
Q ss_pred HHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
+..++.++..+|.+...+ + .+......++.+++|++++.+++..++............+.
T Consensus 195 v~~~~~~~~~~e~~~~~~----~----------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y 254 (444)
T PRK09669 195 VLFFCCFFMTKERYTPEV----D----------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLY 254 (444)
T ss_pred HHHHHHhCCeEEecCCCC----c----------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 665555555454322110 0 00011234677889999888777766655555444444444
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|.+...+ ++...+.+.....+..+++.++.++++||+|+|+
T Consensus 255 ~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~ 295 (444)
T PRK09669 255 YVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR 295 (444)
T ss_pred eeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 4443333 2333444555556777888899999999999874
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.8e-14 Score=156.98 Aligned_cols=336 Identities=11% Similarity=-0.021 Sum_probs=205.9
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHH-HHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhH-HHHHH
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADH-LRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVT-ATMAL 197 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr-~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 197 (744)
..+|++.+. +++.+++.....+..+++|+++|| + |||+.++++.++++++.++++++.+... +.+.|
T Consensus 43 ~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~----------G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~ 112 (489)
T PRK10207 43 KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLL----------GTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL 112 (489)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhcc----------chHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 345555543 777788888888888999999999 8 7888999999999999999998876554 44679
Q ss_pred HHHHHhhhcccccccccccccCcc---hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh------------h
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAPR---YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID------------A 262 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p~---~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~ 262 (744)
.+.+++.|...+...+++.|..|+ +|++.+++++++.++|.++++.+.....+.-.+.+..... .
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~ 192 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFA 192 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999989999998863 3578899999999998887765332221111111100000 0
Q ss_pred hHhhhhhh---c-h-hhHHH-----------------------HH----------------HHHhhhh--cCCCcceehh
Q psy15142 263 TKEGLEKF---N-I-EREVA-----------------------TY----------------IKQYFEN--AYGPYWQCVV 296 (744)
Q Consensus 263 ~~~~~~~~---~-~-~~~~~-----------------------~~----------------~~~~~~~--~~~~~~~~~~ 296 (744)
..+..++. + . +.+.. .. +.+..+. ..+++.....
T Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~ 272 (489)
T PRK10207 193 CRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAF 272 (489)
T ss_pred cchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 00000000 0 0 00000 00 0000000 0011111111
Q ss_pred hh---hhcccccchhhheeeecccc-----cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchh-------hHH
Q psy15142 297 GR---NFGSYVSFETHYIYFYLGKV-----KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRI-------FGT 361 (744)
Q Consensus 297 ~~---~~~~~~~~~~~~~~~~~~~~-----~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~-------l~~ 361 (744)
.+ ....+..+.........+.+ ...|+.. ..+++.++..+..++.+++.+++.||+|+|+. +.+
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~ 351 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL 351 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH
Confidence 11 11111111111111111111 1112211 23556666667777888889999999999974 667
Q ss_pred HHHHHHHHHHHHH---HHh-----hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhh
Q psy15142 362 AIACTSFLHLFVP---TAI-----KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLG 433 (744)
Q Consensus 362 ~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig 433 (744)
|+++.+++.+... ... ..+.+.++...++.|+|.+...+...+++.+..|++.+|.++|+++....+|+.++
T Consensus 352 G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg 431 (489)
T PRK10207 352 GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLG 431 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666654310 011 12466677788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh----------ccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 434 LPISAILTE----------HFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 434 ~~i~~~l~~----------~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
..++..... .-...+.|...++.++++.++.+++
T Consensus 432 ~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 432 GYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888765421 0013466666666666665555444
|
|
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.8e-12 Score=138.95 Aligned_cols=240 Identities=13% Similarity=0.056 Sum_probs=165.2
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccC-CchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYP-ANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
++.|+|..++|.+.++..+..+++++++|.++||.+ +|+++.+..++.++..+. ....++++.+++..++..++...
T Consensus 30 ~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~--~~~~~~f~~~~~~~~l~~~~~~p 107 (400)
T PF03825_consen 30 ESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL--LAFSSSFWWLFVIMLLFSFFFSP 107 (400)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHcc
Confidence 567899999999999999999999999999999985 566776766666665555 45667788777777788888888
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHH-HHHhhhccCc---hhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI-SAILTEHFSW---EAMFYFYGCMGLLWYLCWLWLSFEKPC 473 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i-~~~l~~~~gw---~~~f~~~~~~~~~~~~~~~~~~~e~p~ 473 (744)
..|...++..+... +++.-.|-....+++|-+++.+. ++.+....++ ...+++.+...++.....+ ..|+.|.
T Consensus 108 ~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l-~lp~~~~ 184 (400)
T PF03825_consen 108 TMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL-FLPKTPP 184 (400)
T ss_pred HHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence 88888888888765 33444454555566666665443 2223222222 2345555544444433333 3466653
Q ss_pred CCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Q psy15142 474 LHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGF 553 (744)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 553 (744)
++...+ + .++....+..+++|+|++....+..++.........+|.+.|+++.-|.+....+.
T Consensus 185 ~~~~~~--~---------------~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~ 247 (400)
T PF03825_consen 185 KRSAKE--S---------------VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGI 247 (400)
T ss_pred ccccCC--C---------------cccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHH
Confidence 211100 0 00011123457899999988888888888888889999999999853377777787
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 554 IGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 554 ~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+.++..+.-++.-...+++..|+|.++
T Consensus 248 ~~~l~~~aEi~~f~~~~~~~~r~g~~~ 274 (400)
T PF03825_consen 248 LWALGVVAEIPFFFFSGRFLKRFGIKW 274 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 777777888888888899999998774
|
|
| >KOG4686|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.7e-14 Score=136.30 Aligned_cols=325 Identities=10% Similarity=-0.012 Sum_probs=194.9
Q ss_pred ceeEeeccccchh-hhhhcccccc---cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHH
Q psy15142 107 GFIISFGMKCNLG-FAKLQFEGRT---GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFV 182 (744)
Q Consensus 107 ~~~~~~~~~~~~~-~~~~~~~~~~---g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~ 182 (744)
+.++.+--|..+. ++.++.+++. -++-+++..-..+-+.++|++.||.- |-|+..++-++...++-+
T Consensus 55 gsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~f---------gir~gtii~~~fv~~Gql 125 (459)
T KOG4686|consen 55 GSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRF---------GIRLGTIILCIFVFLGQL 125 (459)
T ss_pred cceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhh---------hhhHHHHHHHHHHHHHHH
Confidence 3355555666554 3444555532 77778888888888999999999862 333333222222223322
Q ss_pred HH---HhcCChhHHHHHHHHHHHhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhc--------cCCcc
Q psy15142 183 VV---AYTKSEVTATMALCLGVAFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGR--------RGKST 250 (744)
Q Consensus 183 ~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~--------~~~~~ 250 (744)
+. +..+.+|.+++.|++-|+|.-....+-..++.-+.. |+-+.++|+.....-+|..+-.++. ...+.
T Consensus 126 iFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~ 205 (459)
T KOG4686|consen 126 IFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPG 205 (459)
T ss_pred HHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhccc
Confidence 22 355678899999999888876666666777666665 6899999998887777654332211 00110
Q ss_pred cchhhH--H---HhHhhhHhhhhhh---chhhHHHHHHH----------Hhhh-hc-CCCcceehhhhhhcccccchhhh
Q psy15142 251 MDADMQ--Q---KAIDATKEGLEKF---NIEREVATYIK----------QYFE-NA-YGPYWQCVVGRNFGSYVSFETHY 310 (744)
Q Consensus 251 ~~~~~~--~---~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (744)
...... + ....+........ -.++..+..+. +.-+ +. +.+.|. ++.+++..++...-.+
T Consensus 206 ~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~-~~iicv~yyva~fPFi 284 (459)
T KOG4686|consen 206 VGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWV-LVIICVLYYVAWFPFI 284 (459)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHH-HHHHHHHHHHHHHHHh
Confidence 001000 0 0000000000000 00000000000 0000 12 223333 3333333333222222
Q ss_pred eeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHH-HHHHHHHHhhcChHHHHHHHH
Q psy15142 311 IYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSF-LHLFVPTAIKLNPGSVIIVRI 389 (744)
Q Consensus 311 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 389 (744)
.......++.+|+|+..++.+.+......++.+++.|.++||+|++-..+.+..+..+ +... ..+ +.+.=.+...
T Consensus 285 ~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~--l~F--t~lsPy~~m~ 360 (459)
T KOG4686|consen 285 TLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG--LFF--TFLSPYTSMT 360 (459)
T ss_pred hhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh--HHh--hhccHHHHHH
Confidence 2222333688999999999998888888889999999999999999887776554433 3333 112 2333345566
Q ss_pred HHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC
Q psy15142 390 CQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS 445 (744)
Q Consensus 390 l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g 445 (744)
+.|+.........+..++-..|.++.|++.|..+...++|-.+.|+++|.+.++-|
T Consensus 361 ~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 361 FLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 77888777766678888899999999999999999999999999999999998644
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-12 Score=134.60 Aligned_cols=186 Identities=8% Similarity=-0.089 Sum_probs=144.6
Q ss_pred HhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc------------
Q psy15142 376 AIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH------------ 443 (744)
Q Consensus 376 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~------------ 443 (744)
+...++..+++..++.|.|.+...+..+.|+++..|++++++.+++.+.++.+|..++|++++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 45567889999999999999999999999999999999999999999999999999999999987732
Q ss_pred ----cCchhHHHHHHHHHHHHHHHHHhh-cccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHH
Q psy15142 444 ----FSWEAMFYFYGCMGLLWYLCWLWL-SFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAI 518 (744)
Q Consensus 444 ----~gw~~~f~~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 518 (744)
..|+++|++.+.+.++..+++.+. .||.+++ +.++ . . . . .....++.+++|.++..
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~----~~~~---~----~---~--~---~~~~~~~~~~~~~~~l~ 145 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEA----DVAR---V----S---S--G---DTTQKTSAFQFTHLVLG 145 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc----cccc---c----c---c--c---cccchhhHHhhHHHHHH
Confidence 468999887766655554444333 1221110 0000 0 0 0 0 00112346778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 519 IVANFCRSWNFYLLVLFQASYLKST--FHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+..|+......++..|.+.|+.+. +|+++.+.+...+....+.++|+++++++.||+++|+
T Consensus 146 ~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~ 209 (310)
T TIGR01272 146 ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR 209 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 8888887778889999999999853 6899999999999999999999999999999999773
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.8e-13 Score=134.75 Aligned_cols=340 Identities=13% Similarity=0.018 Sum_probs=231.0
Q ss_pred Eeeccccchhhhh--hcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHh
Q psy15142 110 ISFGMKCNLGFAK--LQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY 186 (744)
Q Consensus 110 ~~~~~~~~~~~~~--~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~ 186 (744)
.++.+.+.++... .|.+... |+++++|.++..+.+++..+++.|++ -.+.+..++++.+++.++=..
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g----------~er~l~~~Llli~~G~~iR~~ 96 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFG----------EERSLFLALLLIAAGILIRSL 96 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----------hHHHHHHHHHHHHHHHHHHhc
Confidence 4445555555433 3444433 99999999999999999999999995 444677888888888877776
Q ss_pred cCChhHHHHHHHHHHHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHHhhhccCCcccc-hhhHHHhHhhhHh
Q psy15142 187 TKSEVTATMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMD-ADMQQKAIDATKE 265 (744)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 265 (744)
. +.+.+...-.+.|.+.+....-.++.+-+-.|++.|..+|+|..+.++|+.+++.+..-..+.. .+...........
T Consensus 97 ~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~a 175 (395)
T COG2807 97 G-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLA 175 (395)
T ss_pred c-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHH
Confidence 6 6667777788889999988888899999999999999999999999998888865443322222 1211111111110
Q ss_pred hh------hhhchhh--HHH-H--HHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHH
Q psy15142 266 GL------EKFNIER--EVA-T--YIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSS 334 (744)
Q Consensus 266 ~~------~~~~~~~--~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 334 (744)
.+ .....++ ... + .....+ +.+..|.+.+...+.....+......+.+ ..+.|+|..+.|++.+.
T Consensus 176 llAl~~WlPq~~r~~~~~~~~~~~~~~~vw--~~~~aW~vtLfmGlqS~~~Y~~~~WLP~i--li~~G~sa~~aG~llsl 251 (395)
T COG2807 176 LLALLIWLPQALREQAASIATKLVSVRKVW--RSPLAWQVTLFMGLQSLLYYIVIGWLPAI--LIDRGLSAAEAGSLLSL 251 (395)
T ss_pred HHHHHHHhhhcccccccccccccccccccc--cCchhHHHHHHHHhhHHHHHHHHHHHHHH--HHHcCCCHHHhhhHHHH
Confidence 00 0000000 000 0 000011 11223444444444333333333333333 35679999999999999
Q ss_pred HHHHHHHhhhhhHHhhhcc-CCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCc-
Q psy15142 335 FFWGYLITQVPGGFFASRY-PANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPP- 412 (744)
Q Consensus 335 ~~~~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~- 412 (744)
..+.....++....+++|. .+|+..+...+++.++.+. +.+.+....+.. .++.|+|.|+.+|...+.+....+.
T Consensus 252 ~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G--~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a 328 (395)
T COG2807 252 MQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVG--LLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDA 328 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH--HHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCCh
Confidence 9999999999999999976 6777777777777777766 334443322222 4889999999999999999887754
Q ss_pred cchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHhh
Q psy15142 413 LERSRLATIAFCGTYAGIVLGLPISAILTEHF-SWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 413 ~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
++-+...|+.+..+++=..+||.+.|++-|.. +|+..+...+...++..+.-+..
T Consensus 329 ~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 329 AIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 55577888999999999999999999998865 58888887777776666555444
|
|
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.9e-14 Score=156.86 Aligned_cols=315 Identities=14% Similarity=0.049 Sum_probs=205.3
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc-C-------Chh
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT-K-------SEV 191 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~-~-------~~~ 191 (744)
...+.+... |++..+.-+..++..|+.|+++||...|.. .||+.+++|.+..+++..++... + ...
T Consensus 30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~G-----rrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWG-----RRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccc-----ccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 444555433 888888888888999999999998755532 36677778888888887777765 3 123
Q ss_pred HHHHHHHHHHHhhhcccccccccccccCcc--hhhHHHHHHhhhhhhhhHHHhhhccC-Ccccch--h--hHHHhHhh--
Q psy15142 192 TATMALCLGVAFSGFAISGYNVNHLDIAPR--YASILMGMSNGIGTIDIFISYIGRRG-KSTMDA--D--MQQKAIDA-- 262 (744)
Q Consensus 192 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~--~rg~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~--~--~~~~~~~~-- 262 (744)
++.+..++-.++..+...+..++..|++++ +|.+..+..+....+|.++...+... ...... . ........
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~ 184 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA 184 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence 345555555777777788899999999973 69999999999888888644332211 111111 0 11111000
Q ss_pred h---H------hhhhh---hchhhHH----HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCch
Q psy15142 263 T---K------EGLEK---FNIEREV----ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVA 326 (744)
Q Consensus 263 ~---~------~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 326 (744)
. . ...++ ...+++. .+.++..+++ + .+...+...+...............+....+|.+ .
T Consensus 185 iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~n--r-~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~ 260 (428)
T PF13347_consen 185 IVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRN--R-PFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-G 260 (428)
T ss_pred HHHHHHhhhhhheeeeccccccccccccccccchhhhccc--c-hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-h
Confidence 0 0 00011 0001111 1122222222 1 2222332222222222221111111122334433 4
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh--cChHHHHHHHHHHhhhhhhhhhHHhH
Q psy15142 327 QESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK--LNPGSVIIVRICQGLVEGVCYPAVHG 404 (744)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~ 404 (744)
..+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++. .+. ++.+.+++..++.|++.+..+...++
T Consensus 261 ~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a 338 (428)
T PF13347_consen 261 LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL--FFLGPGSPWLVLILFILAGIGYGAFFVIPWA 338 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH--HHHHhhhHHHHHHHHHHhHhhhccccccccc
Confidence 66777888899999999999999999999999999999999888774 344 48888999999999999999999999
Q ss_pred HhhhccCc-------cchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 405 IWRFWAPP-------LERSRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 405 ~~~e~~p~-------~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
+++|..+. ++.|...|+......+|..+++.+.+.+.+..|+
T Consensus 339 ~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 339 MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 99998873 3358899999999999999999999988776554
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.6e-13 Score=146.90 Aligned_cols=344 Identities=11% Similarity=-0.031 Sum_probs=210.3
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhh-hhhHHHHHHHHHHhcCChh---------
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCG-GFGMEAFFFVVVAYTKSEV--------- 191 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~-~~~~~~~~~~~~~~~~~~~--------- 191 (744)
++.+. ..+++..+..+...+..++.|++|||...|. |||+..++ +.+...++.++.+++.+..
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~------GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF------GRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC------CChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 44444 3388999999999999999999999863332 56655544 5777777777877766532
Q ss_pred --------HHHHHHHHHHHhhhcccccccccccccCcc-hh--hHHHHHHhhhhhhhhHHHhhhccCC------cccc-h
Q psy15142 192 --------TATMALCLGVAFSGFAISGYNVNHLDIAPR-YA--SILMGMSNGIGTIDIFISYIGRRGK------STMD-A 253 (744)
Q Consensus 192 --------~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~r--g~~~g~~~~~~~~g~~~~~~~~~~~------~~~~-~ 253 (744)
.+++...+..+..+...++..++++|..|+ +| +.+.++.+...++|.++++.+.... +... .
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 233334455557777777889999999984 33 6899999999999988887644321 0000 0
Q ss_pred ------hhHHHhHhh-----hH-------hhhhhhc------------hh--hHHHHHHHHhhh--hcCCCcceehhhhh
Q psy15142 254 ------DMQQKAIDA-----TK-------EGLEKFN------------IE--REVATYIKQYFE--NAYGPYWQCVVGRN 299 (744)
Q Consensus 254 ------~~~~~~~~~-----~~-------~~~~~~~------------~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~ 299 (744)
...+..... .. ...|... .. ......+++.++ +..++..+.+....
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vq 267 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVT 267 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHH
Confidence 000000000 00 0001000 00 000111222222 22223333333344
Q ss_pred hcccccchhhheeeecccc-cccccCc------hh----hHHHHHHHHHHHHHhhhhhHHhhhccCC-chhhHHHHHHHH
Q psy15142 300 FGSYVSFETHYIYFYLGKV-KHINWTV------AQ----ESAVDSSFFWGYLITQVPGGFFASRYPA-NRIFGTAIACTS 367 (744)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~-~~~g~s~------~~----~~~~~~~~~~~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~ 367 (744)
+..+..+...+.|.+.... +-++-++ .+ ..+...++.+...+.+++.-++.+|+|+ |++..++.++.+
T Consensus 268 ffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~ 347 (477)
T TIGR01301 268 CLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILA 347 (477)
T ss_pred HHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 4444433333333222221 1122111 01 1233444555556777778889999995 677788877777
Q ss_pred HHHHHHHHHhh--cC-----------------hHHHHHHHHHHhhhhhhhhhHHhHHhhhccCcc--chhHHHHHHHHHh
Q psy15142 368 FLHLFVPTAIK--LN-----------------PGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPL--ERSRLATIAFCGT 426 (744)
Q Consensus 368 ~~~~~~~~~~~--~~-----------------~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~--~Rg~~~g~~~~~~ 426 (744)
++.+.+..... ++ .+..++...+.|+..+..+.+-++++++..|++ ..|..+|+.+.+.
T Consensus 348 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I 427 (477)
T TIGR01301 348 ICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAI 427 (477)
T ss_pred HHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHH
Confidence 77666321111 11 256677778899999999999999999999954 4599999999999
Q ss_pred hhHHHhhHHHHHHhhhccC--chhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 427 YAGIVLGLPISAILTEHFS--WEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 427 ~~g~~ig~~i~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
.+.+.+..+..|.+.+.+| -...+.+.++..++..++.++..|+.+
T Consensus 428 ~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 428 VIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988888665554 567788888888888888888877654
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=150.99 Aligned_cols=328 Identities=11% Similarity=-0.011 Sum_probs=194.8
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHH-HHHHHHHhcCChh-HHHHHH
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEA-FFFVVVAYTKSEV-TATMAL 197 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 197 (744)
..++.+... +.+.++..+...+ ++++|.++||+...++ .||+.++++.++.+ +.....+..++.. ...+++
T Consensus 54 ~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~-----rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 127 (468)
T TIGR00788 54 DDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGY-----TKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFI 127 (468)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCc-----cchHHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 334555533 7888888888888 5559999999964443 46677777766652 4434444444533 344478
Q ss_pred HHHHHhhhcccccccccccccCcchhhH---HHHHHhhhhhhhhHHHhhhccCCcccchhhHH---Hh-HhhhH----hh
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAPRYASI---LMGMSNGIGTIDIFISYIGRRGKSTMDADMQQ---KA-IDATK----EG 266 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p~~rg~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~-~~~~~----~~ 266 (744)
++.+++.+..-....++..|..+++++. ..++...+.++|.+++..+.....+...+... .. ..... ..
T Consensus 128 ~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~ 207 (468)
T TIGR00788 128 FLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL 207 (468)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh
Confidence 8888888887788899999988732322 22222222334555543322211110000000 00 00000 00
Q ss_pred h-hhh----ch-hh---------------HHHHHHHHhhhh-cCCCcceehhhhhhcccccchhhheeeecccccccccC
Q psy15142 267 L-EKF----NI-ER---------------EVATYIKQYFEN-AYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWT 324 (744)
Q Consensus 267 ~-~~~----~~-~~---------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 324 (744)
. ++. +. .+ ...+.+++.+.- +.+..|......++... ................+|++
T Consensus 208 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~~~~~~~~f~~~~~~lG~s 286 (468)
T TIGR00788 208 SKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA-NLPGASGSVFCATTQCLPGG 286 (468)
T ss_pred cccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hcCCCCceeEEEEcccCCCC
Confidence 0 000 00 00 001111111110 11112222222222011 11111111111223578999
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH---h-----hcChHHHHHHHHHHhhhhh
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA---I-----KLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~l~G~~~~ 396 (744)
+...|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..+.. . .++.+.++...++.+++.+
T Consensus 287 ~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g 366 (468)
T TIGR00788 287 PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQ 366 (468)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHH
Confidence 9999999999999999999999999999999999999998888776442100 0 1233344556678888888
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-----chhHHHHHHH
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-----WEAMFYFYGC 455 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-----w~~~f~~~~~ 455 (744)
..+.....++++..|++.+|+..++.....++|..+++.+++.+.++.| ++..+....+
T Consensus 367 ~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i 430 (468)
T TIGR00788 367 LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG 430 (468)
T ss_pred HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH
Confidence 8888899999999999999999999999999999999999999998877 5555444333
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.8e-13 Score=146.49 Aligned_cols=313 Identities=12% Similarity=0.015 Sum_probs=178.0
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCC------hhHH
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS------EVTA 193 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~------~~~~ 193 (744)
...|.+... |++..+.-+--++.-|+.|+++||...|.+ .||+.++++.+..++..+++-..++ ..++
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~G-----r~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWG-----KFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCC-----CcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 444554433 777788888888999999999999865542 3567777787767766665544432 2344
Q ss_pred HHHHHHHHHhhhcccccccccccccCc--chhhHHHHHHhhhhhhhhHHHhhhc-----cCCcccchhhHHHh--Hhhh-
Q psy15142 194 TMALCLGVAFSGFAISGYNVNHLDIAP--RYASILMGMSNGIGTIDIFISYIGR-----RGKSTMDADMQQKA--IDAT- 263 (744)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~e~~p--~~rg~~~g~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~--~~~~- 263 (744)
.+.-++-..+..+...+..++..|+++ ++|.++.++...+.++|.++++.+. ..........+... ....
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 444455566667777889999999996 3699999999998888876654321 11101000001100 0000
Q ss_pred --Hh-------hhhhhchhh---HHHHHHHHhhhhcCCCcceehhhhhhccccc---chhhheeeecccccccccCchhh
Q psy15142 264 --KE-------GLEKFNIER---EVATYIKQYFENAYGPYWQCVVGRNFGSYVS---FETHYIYFYLGKVKHINWTVAQE 328 (744)
Q Consensus 264 --~~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~s~~~~ 328 (744)
.. ..++...+. ...+.++..++++ .|+..+...+..... ......++..+ -++. +...
T Consensus 193 ~~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk---~~~~l~~~~~~~~~~~~~~~~~~~y~~~y---~~g~-~~~~ 265 (460)
T PRK11462 193 AFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQND---QWRIVGLLTIFNILAVCVRGGAMMYYVTW---ILGT-PEVF 265 (460)
T ss_pred HHHHHHHHHhcceeccCCCccCCCHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHhHhhhhhhh---hcCC-hHHH
Confidence 00 001100000 0122222222221 232222222111111 11111221111 1222 2334
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-ChHHHHHHHHHHhhhhhhhhhHHhHHhh
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL-NPGSVIIVRICQGLVEGVCYPAVHGIWR 407 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 407 (744)
+.+.+++.++.+++.+++++++||+|+|+++..+.++.++..++. ..... +...+++.-++.|++.+...+..+++++
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAM-FFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888999999999999999998775555444333331 12222 2223444456678777777777777887
Q ss_pred hccC-----ccch--hHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 408 FWAP-----PLER--SRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 408 e~~p-----~~~R--g~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
|..+ +.+| |...+.......+|..+++.++|.+.+..|+
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7765 2234 5555666688999999999999988876555
|
|
| >KOG2533|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-13 Score=149.41 Aligned_cols=310 Identities=11% Similarity=0.009 Sum_probs=189.0
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
-|.+.+++++++.+|.+++|.|.||+.- .+.+....++.++..++....+|.+.++++|++.|+.++..+
T Consensus 83 l~~~~t~F~v~Yii~~~p~~~L~~r~~l----------s~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 83 LGVLDTVFYVGYIIGQFPSGLLGDRFPL----------SKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred hhhHHHHHHHHHHHHHhhHHHHHHhCCh----------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccc
Confidence 3999999999999999999999999942 124444455555656566678999999999999999999999
Q ss_pred ccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcc------cchhhHHHhHhhhHh-------------hhh
Q psy15142 209 SGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKST------MDADMQQKAIDATKE-------------GLE 268 (744)
Q Consensus 209 ~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-------------~~~ 268 (744)
|+...++.-+.. ++||+.+|+++++..+|.++|.++..++.. ...|.+....+-... ..+
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 999999888886 579999999999999988888776666322 222211111100000 000
Q ss_pred --hhchhhH-------H-------------HHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCch
Q psy15142 269 --KFNIERE-------V-------------ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVA 326 (744)
Q Consensus 269 --~~~~~~~-------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 326 (744)
....+++ . ...+++.+ +..+.|...+..++.....+...+..+ +...+..|++..
T Consensus 233 ~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~dp~vw~~~l~~~~~~lv~~~~~~~lp-l~l~~~~~~s~~ 309 (495)
T KOG2533|consen 233 KAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEAL--KDPGVWPFSLCYFFLKLVNYGFSYWLP-LYLKSNGGYSEL 309 (495)
T ss_pred hccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHH--hchhHHHHHHHHHHHhhccccHHHHHH-HHHHcCCCcChH
Confidence 0000000 0 00111111 112233333443333333333322222 222334678899
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHhhhc----cCCchhhHHHHHHHHHHH-HHHHHHhhcChHHHHHHHHHHhhhhhhhhhH
Q psy15142 327 QESAVDSSFFWGYLITQVPGGFFASR----YPANRIFGTAIACTSFLH-LFVPTAIKLNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~g~l~Dr----~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
+.+.+.+.+.++.+++.+++|+++|| ..+|..+.....+..+.. +. .....+......+.+....+.....+.
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAIS--LLAAAVLPGAYGAFLIGPYGLIATAII 387 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH--HHhhccchHHhHHHHhcchhhHHHHHH
Confidence 99999999999999999999999999 566666665555554433 33 222233333333333444445666677
Q ss_pred HhHHhhhccCccchhH-HHHHHHHHhhhHHHhhHH-HHHHhhhccCchhHHHHH
Q psy15142 402 VHGIWRFWAPPLERSR-LATIAFCGTYAGIVLGLP-ISAILTEHFSWEAMFYFY 453 (744)
Q Consensus 402 ~~~~~~e~~p~~~Rg~-~~g~~~~~~~~g~~ig~~-i~~~l~~~~gw~~~f~~~ 453 (744)
.....++....+.|.. ..+....+.+.++.++|. ..+.....++|...|...
T Consensus 388 ~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 388 ALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred HHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 7788887776655543 334444444444444443 334444557888888433
|
|
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-12 Score=143.69 Aligned_cols=241 Identities=10% Similarity=0.029 Sum_probs=150.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc----CCchhh-HHHHHHHHHHHHHHHHHh----hcC--hHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY----PANRIF-GTAIACTSFLHLFVPTAI----KLN--PGSVII 386 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~----Grr~~l-~~~~~~~~~~~~~~~~~~----~~~--~~~~~~ 386 (744)
.+.+|+++.+.|.+.++..+..++..++.|+++||. ||||.+ .++.+...+...++ ... +.+ ...+++
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 114 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV-FWVPTDWSHSSKVVYAYL 114 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH-HhCcCCCCcchHHHHHHH
Confidence 566899999999999999999999999999999996 777755 45555444443332 111 111 122333
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhccCc-cchhHHHHHHHHHhh-----hHHHhhHHHHHHhhhcc--CchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWAPP-LERSRLATIAFCGTY-----AGIVLGLPISAILTEHF--SWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~p~-~~Rg~~~g~~~~~~~-----~g~~ig~~i~~~l~~~~--gw~~~f~~~~~~~~ 458 (744)
..++.+++.+...+...++..+..+. ++|.+..++-..+.. ++..++|.+.+...... +|.....+.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~ 194 (448)
T PRK09848 115 TYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGM 194 (448)
T ss_pred HHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 44567777777777777777776644 678887666554433 44445555554321111 11111122222322
Q ss_pred HHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
+..++.....||++..+. ++......++.+++||.++...+..++...+........|.
T Consensus 195 ~~~~~~~~~~~e~~~~~~---------------------~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~ 253 (448)
T PRK09848 195 VLYFICFKSTRENVVRIV---------------------AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLF 253 (448)
T ss_pred HHHHHHHcCcEeccCCCc---------------------cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhee
Confidence 222222223344322110 00011224677899999988888888888887777778888
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|+++.+|.+....++......++.+++.++.+++.||+++|+
T Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~ 295 (448)
T PRK09848 254 YVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN 295 (448)
T ss_pred eEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 888878877666555555556677888999999999999874
|
|
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-11 Score=137.96 Aligned_cols=239 Identities=10% Similarity=-0.047 Sum_probs=161.9
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc----cCCchhhH-HHHHHHHHHHHHHHHHhhcC------hHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR----YPANRIFG-TAIACTSFLHLFVPTAIKLN------PGSVII 386 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~~~------~~~~~~ 386 (744)
.+.+|+++..+|.+..+.-+.-++..++.|.++|| +||||..+ ++.+.++++.+++ ...++ ...+.+
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll--f~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA--YSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH--HhCCCCCcchHHHHHHH
Confidence 46789999999999999999999999999999996 68876654 5656666666553 22221 223444
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhccC-ccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-------CchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWAP-PLERSRLATIAFCGTYAGIVLGLPISAILTEHF-------SWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~p-~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-------gw~~~f~~~~~~~~ 458 (744)
..++..++.........++.+|..+ +++|++..++...+..+|..+++.+...+.+.. ||+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 5556677777777778889999987 789999999999999999888887766555433 46666666666665
Q ss_pred HHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
++.++.+...+|.++..+ + +...+..++..++|++++.++...++..............
T Consensus 195 i~~~i~~~~~kE~~~~~~-----~----------------~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y 253 (460)
T PRK11462 195 MMLAFCFFTTKERVEAPP-----T----------------TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMY 253 (460)
T ss_pred HHHHHHHhcceeccCCCc-----c----------------CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 555554444444322110 0 0001223567788888877666555555554444444444
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
|.+...|. +...+.+.....++++++.++++++.||+++|+
T Consensus 254 ~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~ 294 (460)
T PRK11462 254 YVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT 294 (460)
T ss_pred hhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 44444443 333445666777888999999999999999874
|
|
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.4e-13 Score=123.69 Aligned_cols=136 Identities=22% Similarity=0.333 Sum_probs=119.6
Q ss_pred HHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCc
Q psy15142 333 SSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPP 412 (744)
Q Consensus 333 ~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~ 412 (744)
+.+.++..+++++.|++.||+|||+.+..+..+.+++.++ ....++.+.+.+.+++.|++.+...+....++.|.+|+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAM--FALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 4567788889999999999999999999998888888776 45667888888999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 413 LERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 413 ~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
++|+++.++.+....+|..+++.+.+.+.+..+|++.+++.+++.++..+...++.||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999998999999998888877776666655443
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.1e-12 Score=134.18 Aligned_cols=265 Identities=12% Similarity=0.038 Sum_probs=191.0
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc----cCCchhh-HHHHHHHHHHHHHHHHHhhc------ChHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR----YPANRIF-GTAIACTSFLHLFVPTAIKL------NPGSVII 386 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr----~Grr~~l-~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 386 (744)
.+..|+++..+|.+..+.=+.-++.-++.|.++|| +||+|.. +++.+..++...+ +..++ +.....+
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l--~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVL--LFITPDFSMTGKLIYALV 117 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHH--HHcCCCcccCcchHHHHH
Confidence 46789999999999999999999999999999996 6876654 5565666666665 33333 2334555
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhccC-ccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-------ccCchhHHHHHHHHHH
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWAP-PLERSRLATIAFCGTYAGIVLGLPISAILTE-------HFSWEAMFYFYGCMGL 458 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~p-~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-------~~gw~~~f~~~~~~~~ 458 (744)
...+.+++.........++.+|+.+ +++|.+..++-+.+..+|..+...+.+.+.. ..||+....+.+++.+
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 6678888888888888889999875 5889999999999999998887777766654 3467777777777777
Q ss_pred HHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 LWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQAS 538 (744)
Q Consensus 459 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 538 (744)
+..+++++-.+|++.+....+.. .+......+..+++|+++...++..++...+.+........
T Consensus 198 i~~l~~~~~v~ER~~~~~~~~~~----------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~y 261 (467)
T COG2211 198 ILLLFCFFNVKERVVETQPTKTG----------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVY 261 (467)
T ss_pred HHHHHHHHHhhcccCccccCccc----------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 77777776666665422111000 00111223446789999988888888888888877788888
Q ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccC
Q psy15142 539 YLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 610 (744)
Q Consensus 539 ~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 610 (744)
|.+..+|.+.............+.+++.++...+.+|+|+|+ +..++.++..++.+++.+.+
T Consensus 262 y~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~----------~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 262 YVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK----------LFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred eEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH----------HHHHHHHHHHHHHHHHHhhc
Confidence 888778887777777777777777888999999999999984 33344445555444444444
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-12 Score=137.60 Aligned_cols=325 Identities=12% Similarity=-0.018 Sum_probs=205.0
Q ss_pred ccccchhhhhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCC--
Q psy15142 113 GMKCNLGFAKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS-- 189 (744)
Q Consensus 113 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~-- 189 (744)
++..++. ...|.+.. .|.+..+.-+--++.-|+.|.++||..+|.. .||+.++.+.+-.++...++-.+++
T Consensus 34 yLl~fYT-dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~G-----rfRP~lL~g~ip~~i~~~l~F~~p~~~ 107 (467)
T COG2211 34 YLLFFYT-DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWG-----RFRPWLLWGAIPFAIVAVLLFITPDFS 107 (467)
T ss_pred HHHHHHh-cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccc-----cccHHHHHHhHHHHHHHHHHHcCCCcc
Confidence 3333333 44455442 2666677777777899999999999876653 4678888888888888777766653
Q ss_pred ----hhHHHHHHHHHHHhhhcccccccccccccCc--chhhHHHHHHhhhhhhhhHHHhh-----hccCCcccchhhHHH
Q psy15142 190 ----EVTATMALCLGVAFSGFAISGYNVNHLDIAP--RYASILMGMSNGIGTIDIFISYI-----GRRGKSTMDADMQQK 258 (744)
Q Consensus 190 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p--~~rg~~~g~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~ 258 (744)
...+.+.-.+.+++..+...+..++..|+.+ ++|.+..+.-..+.++|.++... +............+.
T Consensus 108 ~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~ 187 (467)
T COG2211 108 MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQG 187 (467)
T ss_pred cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHH
Confidence 3455566667777777888889999999995 47999999999999998665533 222211110111110
Q ss_pred hH------------hhhHhhhhhhc----hhhHHHHHHHHhhh-hcCCCcceehhhhhhcccccchh---hheeeecccc
Q psy15142 259 AI------------DATKEGLEKFN----IEREVATYIKQYFE-NAYGPYWQCVVGRNFGSYVSFET---HYIYFYLGKV 318 (744)
Q Consensus 259 ~~------------~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 318 (744)
.. .+....-|+.. .+...+..+++.+. -...+.|+..+...+........ ...|+. .
T Consensus 188 ~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~---~ 264 (467)
T COG2211 188 TALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYV---T 264 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeE---E
Confidence 00 00001111111 11101122221111 01112233322222222222221 222222 2
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
-.+|.+.....+.......+.+++.+++.++++|+|+|+++.++.++.+++.++....-.++.+.+++..++.++|.+..
T Consensus 265 y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~ 344 (467)
T COG2211 265 YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIA 344 (467)
T ss_pred EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcc
Confidence 23455555666777777777788889999999999999999999999999888742222346777788889999999999
Q ss_pred hhHHhHHhhhccCc-----cch--hHHHHHHHHHhhhHHHhhHHHHHHhhhccCc
Q psy15142 399 YPAVHGIWRFWAPP-----LER--SRLATIAFCGTYAGIVLGLPISAILTEHFSW 446 (744)
Q Consensus 399 ~~~~~~~~~e~~p~-----~~R--g~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw 446 (744)
.+..+++++|..+- ..| |...|....+.-+|..++..+.|++....|+
T Consensus 345 ~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 345 NPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred ccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999887642 223 6777888888889999999999988776554
|
|
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=133.97 Aligned_cols=315 Identities=15% Similarity=0.068 Sum_probs=215.0
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHH---hcCChhHHHHHHHHHHHhh
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA---YTKSEVTATMALCLGVAFS 204 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 204 (744)
+.+++-...+.+++++++..|++.+|+ |+|.-+++|+.+.+++..+.. ...++..++...++.+.|.
T Consensus 49 ~a~liqfaff~gYf~~~lpa~~~~kk~----------gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi 118 (422)
T COG0738 49 EASLIQFAFFGGYFIMSLPAGLLIKKL----------GYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGI 118 (422)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHh----------hhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhh
Confidence 459999999999999999999999999 677788999999999988884 4457788888899999999
Q ss_pred hcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcc------cchhhH--HHhH--------hhh----
Q psy15142 205 GFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKST------MDADMQ--QKAI--------DAT---- 263 (744)
Q Consensus 205 g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~--~~~~--------~~~---- 263 (744)
|..-++...+++.+.|+ ...+-+++.+....+|++++|++.-.... +..... .... ...
T Consensus 119 ~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~ 198 (422)
T COG0738 119 GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGL 198 (422)
T ss_pred HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99999999999999975 58888999999999999999875422211 111110 0000 000
Q ss_pred -----Hhh-hhhhch-hh----HHH-H--HHHHhhhhcCCCcceehhhhhhcccccchh-hheeeecccccccccCchhh
Q psy15142 264 -----KEG-LEKFNI-ER----EVA-T--YIKQYFENAYGPYWQCVVGRNFGSYVSFET-HYIYFYLGKVKHINWTVAQE 328 (744)
Q Consensus 264 -----~~~-~~~~~~-~~----~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~ 328 (744)
... ..+.+. +. ..+ + ...+.+++++ +.......+ .++.... .+.+...+..+..|++..+.
T Consensus 199 lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~---~~~gvl~~F-lYVG~Eva~gsfl~~y~~~~~g~~~~~a 274 (422)
T COG0738 199 LVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKH---LRLGVLAIF-LYVGAEVAIGSFLVSYLEELLGLNEQQA 274 (422)
T ss_pred HHHHHHHHHhccCCcCCcccccccccccchHHHHHhChH---HHHHHHHHH-HHHhHHHHHHHHHHHHHHhcCCccHHHH
Confidence 000 001010 00 000 0 1112222221 111111111 1221111 11222222234478888899
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhh
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRF 408 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e 408 (744)
+...+.+..+.++|.+++.++..|+...|.+....++..+.++. .++.++.. -+...++.|++.+..+|...+...+
T Consensus 275 a~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~--~~l~~g~v-~~~~l~~ig~F~simfPTIfslal~ 351 (422)
T COG0738 275 AYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA--VALIGGVV-ALYALFLIGLFNSIMFPTIFSLALK 351 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH--HHHhcChH-HHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988877766665555 45566644 3445678899999999999999999
Q ss_pred ccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHH
Q psy15142 409 WAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWY 461 (744)
Q Consensus 409 ~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~ 461 (744)
..| +-....|..-....+|+++.|.+.|++.|..|-...+.....+|.+..
T Consensus 352 ~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 352 NLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred ccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 998 333444555566778999999999999999998888775555554444
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=99.44 E-value=4e-12 Score=141.71 Aligned_cols=252 Identities=10% Similarity=-0.013 Sum_probs=162.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccC-----CchhhHHHHHHHH-HHHHHHHHHhhcChH-HHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYP-----ANRIFGTAIACTS-FLHLFVPTAIKLNPG-SVIIVRIC 390 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l 390 (744)
.+++|++.++++.+.++..+...+-.+ +|.++||++ ||+.++++.++.+ ++... .+..++.. ...+..++
T Consensus 53 ~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~--l~~~~~~~~~~~~~~~l 129 (468)
T TIGR00788 53 TDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL--LPGKVSSAKVAAAFIFL 129 (468)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh--cccccchHHHHHHHHHH
Confidence 567899999999999999999888766 999999997 7777777766653 33222 23334433 33447888
Q ss_pred HhhhhhhhhhHHhHHhhhccCccchhHH---HHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 391 QGLVEGVCYPAVHGIWRFWAPPLERSRL---ATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 391 ~G~~~~~~~~~~~~~~~e~~p~~~Rg~~---~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
.+++.+....+..++..|..+ ++++.. .++......+|..+++.++|.+.+.++|+..|++.+++.++..+.. ++
T Consensus 130 ~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~-~~ 207 (468)
T TIGR00788 130 AALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVS-NL 207 (468)
T ss_pred HHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999998 555443 3344444568999999999999999999999999888877774444 44
Q ss_pred cccCCCC-CCCCChHHH---HHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q psy15142 468 SFEKPCL-HPTISGREL---LYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFC-RSWNFYLLVLFQASYLKS 542 (744)
Q Consensus 468 ~~e~p~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~ 542 (744)
.+|++.. .+...+++. ......... .........+..+++|.++...+..++ ..........+. .+.++
T Consensus 208 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~ 281 (468)
T TIGR00788 208 SKERRAFVRPRIGTYLEMNMALLTLGVLA-----NVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQ 281 (468)
T ss_pred cccccccccccccccchhhhhhhhhhHHH-----HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcc
Confidence 4665311 111000000 000000000 000001124455777887764444444 211111111100 02223
Q ss_pred hcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 543 TFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 543 ~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..|+++.+.|++....+++.+++..+.+++.+|++.|+
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~ 319 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL 319 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH
Confidence 57999999999999999999999999998888888763
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >KOG3626|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.9e-13 Score=148.67 Aligned_cols=264 Identities=13% Similarity=0.167 Sum_probs=203.0
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH--h----------------
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA--I---------------- 377 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~---------------- 377 (744)
...+.++++.++.|++.+.+-++..+...+..+..-|.-|-+++-+|.++++++.++..+- +
T Consensus 122 tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 122 TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 3467899999999999999999999999999999999999999999999999998874200 0
Q ss_pred -----------------------------hcC--hH-HHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHH
Q psy15142 378 -----------------------------KLN--PG-SVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCG 425 (744)
Q Consensus 378 -----------------------------~~~--~~-~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~ 425 (744)
..+ .+ .++++.++.|+|....++...+|+-|...+++-...+|+.+..
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 001 22 4667889999999999999999999999999999999999999
Q ss_pred hhhHHHhhHHHHHHhhhcc-------------------CchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHH
Q psy15142 426 TYAGIVLGLPISAILTEHF-------------------SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYI 486 (744)
Q Consensus 426 ~~~g~~ig~~i~~~l~~~~-------------------gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~ 486 (744)
..+|.++|-++++++...+ -|+..|++.+.+.++..+..+++.++-|+..++.+.++.+..
T Consensus 282 ~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~ 361 (735)
T KOG3626|consen 282 AILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVL 361 (735)
T ss_pred HHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhccc
Confidence 9999999999999876421 277778888888888888877775454544332222221111
Q ss_pred HHhhcccccc-cC---CCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH
Q psy15142 487 EKSLGSSVQV-AM---PTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLM 562 (744)
Q Consensus 487 ~~~~~~~~~~-~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~ 562 (744)
+..-...... .. .+......+++++||.+...+++..+....+.++.+|+|-|++..+|.++..+..+.....+..
T Consensus 362 k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~ 441 (735)
T KOG3626|consen 362 KTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPA 441 (735)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhh
Confidence 1110000000 00 0112235677889999999999999999999999999999999999999999999986666554
Q ss_pred -HHHHHHHHHHhHHhhhc
Q psy15142 563 -TIVVPCGGMLADHLRKK 579 (744)
Q Consensus 563 -~i~~~~~g~l~dr~g~r 579 (744)
.+|.+++|++++|+.-+
T Consensus 442 ~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 442 AAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred hhhhhhccceeeeeeccc
Confidence 67888999999998755
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-14 Score=161.51 Aligned_cols=263 Identities=14% Similarity=0.142 Sum_probs=3.0
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH--Hh-----------------
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT--AI----------------- 377 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~--~~----------------- 377 (744)
.++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+.+|.++++++.++... ..
T Consensus 29 iErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 29 IERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 46889999999999999999999999999999999988888888999999888877310 00
Q ss_pred -----h----------------------c--ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhh
Q psy15142 378 -----K----------------------L--NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYA 428 (744)
Q Consensus 378 -----~----------------------~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~ 428 (744)
. . -+..++++.++.|+|....++...+|+-|.++++.-+..+|+.++...+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 0 0 1345778899999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHhhhc---------------------c-CchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHH
Q psy15142 429 GIVLGLPISAILTEH---------------------F-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYI 486 (744)
Q Consensus 429 g~~ig~~i~~~l~~~---------------------~-gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~ 486 (744)
|.++|-++++.+... . .|...|++.+++.++..+..+++.++-|...+....++.+..
T Consensus 189 GPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~ 268 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSER 268 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhc
Confidence 999999999876542 1 277778888888777777777774444433111111110000
Q ss_pred H------Hhhccccc----ccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Q psy15142 487 E------KSLGSSVQ----VAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGS 556 (744)
Q Consensus 487 ~------~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 556 (744)
+ +...+... ....+......+++++||.+....++.....+...++.+|+|.|++..++.++.+++++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G 348 (539)
T PF03137_consen 269 KEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTG 348 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 0 00000000 0111223345678899999999999999999999999999999999999999999998876
Q ss_pred HHHH-HHHHHHHHHHHHhHHhhhc
Q psy15142 557 LPHL-LMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 557 ~~~~-~~~i~~~~~g~l~dr~g~r 579 (744)
+..+ ++++|.+++|++.+|++-+
T Consensus 349 ~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 349 IVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ------------------------
T ss_pred hhhcchhheehheEEEEEEEecCc
Confidence 6655 5578899999999998654
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-12 Score=139.80 Aligned_cols=147 Identities=11% Similarity=0.053 Sum_probs=125.5
Q ss_pred cCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHH
Q psy15142 323 WTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAV 402 (744)
Q Consensus 323 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 402 (744)
.+....|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++++=..+ ++++++.+.+.+.+.+.|+-.+......
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~--~~~~~~~~~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIG--SGFATNPWVISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH--HHT--SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH--HhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788888888888888889999999999999999999998888777 7889999999999999999999999999
Q ss_pred hHHhhhccCccchhHHHHHH-HHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 403 HGIWRFWAPPLERSRLATIA-FCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 403 ~~~~~e~~p~~~Rg~~~g~~-~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
.-|+++.+|++..++...+. +...++|..+.+.++|.+.|+.|.+..|++.+.+.++..++..+..+++
T Consensus 334 fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 334 FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 99999999999999988886 5888999999999999999999999999999988888777777776544
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=141.65 Aligned_cols=302 Identities=13% Similarity=0.016 Sum_probs=179.4
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhh
Q psy15142 126 EGRTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSG 205 (744)
Q Consensus 126 ~~~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 205 (744)
+....|+.....++..++.++.|+|||.+ |||.+.+++.++..++.++++-++|...+++...+.|++.|
T Consensus 77 ~~~~~w~~~~~~l~~av~~~~~G~LSDlf----------GRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG 146 (599)
T PF06609_consen 77 SDNWSWFSTAWTLASAVSFPFVGRLSDLF----------GRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAG 146 (599)
T ss_pred CccchHHHHHHHHHHHHHHHhhHHHHHHh----------cchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhH
Confidence 33458999999999999999999999999 88889999999999999999999999999999999999877
Q ss_pred cccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHh-------------------------
Q psy15142 206 FAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKA------------------------- 259 (744)
Q Consensus 206 ~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------------- 259 (744)
.... ....++|+.|+ .|+...++..........+++.+.........|.+...
T Consensus 147 ~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~ 225 (599)
T PF06609_consen 147 VQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQL 225 (599)
T ss_pred HHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 7554 34557999985 58776655443222211111111110000000000000
Q ss_pred -------HhhhHhh---------------hh------hh-ch--hhH-HHH-----------HHHHhh-h--hc------
Q psy15142 260 -------IDATKEG---------------LE------KF-NI--ERE-VAT-----------YIKQYF-E--NA------ 287 (744)
Q Consensus 260 -------~~~~~~~---------------~~------~~-~~--~~~-~~~-----------~~~~~~-~--~~------ 287 (744)
.+...+. +. .. .. ... ... .+.+.+ . ++
T Consensus 226 ~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~L 305 (599)
T PF06609_consen 226 HGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRL 305 (599)
T ss_pred ccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHH
Confidence 0000000 00 00 00 000 000 000111 0 00
Q ss_pred --CCCcceeh-hhhhhcccccchhhheeeecccccccccCc---hhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhh-H
Q psy15142 288 --YGPYWQCV-VGRNFGSYVSFETHYIYFYLGKVKHINWTV---AQESAVDSSFFWGYLITQVPGGFFASRYPANRIF-G 360 (744)
Q Consensus 288 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~---~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l-~ 360 (744)
.++.+... +..++..+..+.....++.. ...-++-++ ...++....+.++..+++++.|.+.-+++|-|.. +
T Consensus 306 f~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~-~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li 384 (599)
T PF06609_consen 306 FKDRRGFAALLVISFISGMNFFSVNILWPQQ-VVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLI 384 (599)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHH
Confidence 01111111 11112222211111122111 111222222 2467788888888899999999999988877665 4
Q ss_pred HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHH
Q psy15142 361 TAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAI 439 (744)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~ 439 (744)
++.+++.++..++...-.+|....+..-++.|++.|...........-..|++.-|.+.|+..+...+|+.+|..+...
T Consensus 385 ~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 5655555443332122334555667778899999988887777777778899999999999999999988888766543
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.6e-11 Score=124.88 Aligned_cols=324 Identities=12% Similarity=0.026 Sum_probs=212.1
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHH-HhCCcccchhhhhHHhhhhhHHHHHHHHHHhc-----C-------Ch--hH--
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLR-KKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT-----K-------SE--VT-- 192 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~-~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~-----~-------~~--~~-- 192 (744)
|.+.+++++.+++ .+.+|+.||+.. ..++ .|-+.++.|+++...+..+.+++ . +. +.
T Consensus 18 ~~lval~~~~ap~-R~~~G~~SD~~~s~~G~-----rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~ 91 (403)
T PF03209_consen 18 ALLVALHYLVAPL-RVWFGHRSDTHPSILGW-----RRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLAL 91 (403)
T ss_pred HHHHHHHHHHHHH-HHHhccccccCcccCcC-----CchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHH
Confidence 7888899988885 999999999986 3332 35667777888777766665542 2 22 22
Q ss_pred HHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhcc-CCcccchhhHHHhHhh------hH
Q psy15142 193 ATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRR-GKSTMDADMQQKAIDA------TK 264 (744)
Q Consensus 193 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~------~~ 264 (744)
+.+...+.|++.+...+...++++|.+|+ +|+++.++...+.-+|.+++..+.. .....+.......... ..
T Consensus 92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l 171 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLL 171 (403)
T ss_pred HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 22346666777777778899999999975 6999999999998888888755332 2222222211111100 00
Q ss_pred hh-----hhhh---------chhhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHH
Q psy15142 265 EG-----LEKF---------NIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESA 330 (744)
Q Consensus 265 ~~-----~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 330 (744)
.. .|+. ..+....+.+++.+..+..++....+. .....+...=...-++-.+-||++..+...
T Consensus 172 ~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~---l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~ 248 (403)
T PF03209_consen 172 NLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLF---LGTLAFFMQDVILEPYGGEVFGMSVGETTR 248 (403)
T ss_pred HHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHH---HHHHHHHhhHHHcCCchhHHcCCCHHHHHH
Confidence 00 0000 000111223333333333222222211 112222221111222224668999999999
Q ss_pred HHHHHHHHHHHhhhhhHHhhh-ccCCchhhHHHHHHHHHHHHHHH-HHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhh
Q psy15142 331 VDSSFFWGYLITQVPGGFFAS-RYPANRIFGTAIACTSFLHLFVP-TAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRF 408 (744)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~l~D-r~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e 408 (744)
++.....|..++-...|++.. |.+.++.-.+++.+.+++..++. .+...+.+.+...-++.|++.|.+.....+...+
T Consensus 249 Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~ 328 (403)
T PF03209_consen 249 LTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMD 328 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 999999999999988888877 67888888888887777665532 2344567788889999999999999999999999
Q ss_pred ccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc----------cCchhHHHHHHHHHHHHHH
Q psy15142 409 WAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH----------FSWEAMFYFYGCMGLLWYL 462 (744)
Q Consensus 409 ~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~----------~gw~~~f~~~~~~~~~~~~ 462 (744)
..++++.|..+|.+.....++..++..++|.+.|. .+|...|.+-++..+++++
T Consensus 329 lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 329 LTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988763 2344555555555444433
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=136.60 Aligned_cols=340 Identities=11% Similarity=-0.015 Sum_probs=196.7
Q ss_pred Eeeccccchhhhhhccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC
Q psy15142 110 ISFGMKCNLGFAKLQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 188 (744)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~ 188 (744)
+..+++.|+. ..+|++.. .+.+.+++.....++.+++|+++||+. |||+.++++.++.+++.+++++.+
T Consensus 28 ~~~~L~~yL~-~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRil---------Grrr~iliG~il~~lg~lll~~~~ 97 (493)
T PRK15462 28 MRALLILYLT-NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVL---------GNRMAVMLGALLMAIGHVVLGASE 97 (493)
T ss_pred HHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------CcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555554 34566654 388888999999999999999999982 466677888888888777666543
Q ss_pred -ChhHHHHHHHHHHHhhhcccccccccccccCcc---hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----
Q psy15142 189 -SEVTATMALCLGVAFSGFAISGYNVNHLDIAPR---YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI---- 260 (744)
Q Consensus 189 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~---~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---- 260 (744)
+.....+...+..++.|...+...+++.|..|+ +|++.+++.+...++|+.++|.+.....+...+......
T Consensus 98 ~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG 177 (493)
T ss_pred cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Confidence 223333344455566777777778889998873 599999999999999988887654332211111000000
Q ss_pred --------hhhHhhhhhh-----chh--hH---------------------------HHH------------H----HHH
Q psy15142 261 --------DATKEGLEKF-----NIE--RE---------------------------VAT------------Y----IKQ 282 (744)
Q Consensus 261 --------~~~~~~~~~~-----~~~--~~---------------------------~~~------------~----~~~ 282 (744)
....+...+. +.. ++ ... . .+.
T Consensus 178 m~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (493)
T PRK15462 178 MIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRK 257 (493)
T ss_pred HHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000000 000 00 000 0 000
Q ss_pred hhhhcCCCcceehhhhhh---cccccchhhheeeeccccc----c-cccCchhhHHHHHHHHHHHHHhhhhhHHhhhccC
Q psy15142 283 YFENAYGPYWQCVVGRNF---GSYVSFETHYIYFYLGKVK----H-INWTVAQESAVDSSFFWGYLITQVPGGFFASRYP 354 (744)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~G 354 (744)
..++..+++....+.+++ ..+..+........++..+ + +|++ -..+|+.++..+..++.+++.+++=.|.+
T Consensus 258 ~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~ 336 (493)
T PRK15462 258 AENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESV 336 (493)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHh
Confidence 001111222222111111 1111111111111111111 1 2322 23577788888888888877777756653
Q ss_pred C--ch-----hhHHHHHHHHHHHHHHHHHh--h-----cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHH
Q psy15142 355 A--NR-----IFGTAIACTSFLHLFVPTAI--K-----LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLAT 420 (744)
Q Consensus 355 r--r~-----~l~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g 420 (744)
| |. =+.+|+++.+++.+.+..+. . .+.+++++..+++++|.-...|+..+.+++..|++.||+.+|
T Consensus 337 ~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg 416 (493)
T PRK15462 337 AGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTG 416 (493)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHH
Confidence 2 21 15677777777766532211 1 255667888899999999999999999999999999999999
Q ss_pred HHHHH-hhhHHHhhHHHHHHhhhc------------cCchhHHHHHHHHHHHH
Q psy15142 421 IAFCG-TYAGIVLGLPISAILTEH------------FSWEAMFYFYGCMGLLW 460 (744)
Q Consensus 421 ~~~~~-~~~g~~ig~~i~~~l~~~------------~gw~~~f~~~~~~~~~~ 460 (744)
++... ..+|..++..+++..... ..+...|...++..+++
T Consensus 417 ~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 417 IYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99764 367777776666654310 12445676666666555
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.2e-10 Score=116.62 Aligned_cols=240 Identities=10% Similarity=0.021 Sum_probs=172.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC---hHHHHHHHHHHhhhhhhhhhHHh
Q psy15142 327 QESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN---PGSVIIVRICQGLVEGVCYPAVH 403 (744)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~~~~~~~~~~ 403 (744)
..+...++..+..++.+++.|.++|+.|+||-.+..+....+..... ..+.++ ++..++...+..++.........
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~-L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFL-LWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHH-HHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 34566777778888888999999999998887665555444333332 333333 34455566677788777788899
Q ss_pred HHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHH--h-h---------------hccCchhHHHHHHHHHHHHHHHHH
Q psy15142 404 GIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAI--L-T---------------EHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 404 ~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~--l-~---------------~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
+++.+..++++-++..++.....++|+.+.-++.-. + . +...-|..+.+.++..++..+-.+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 999999999988998888888888888776554311 1 1 122356777777777777777666
Q ss_pred hhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy15142 466 WLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFH 545 (744)
Q Consensus 466 ~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 545 (744)
+..++.++.. ..+...+....++ ...+++++.+++.+....++.+...=+.+++..+...|-...+|
T Consensus 218 ~~v~~~~~~~----~~~~~~l~~g~k~---------L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~g 284 (438)
T COG2270 218 LNVHDAEKIS----SPPPTALRNGFKE---------LKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLG 284 (438)
T ss_pred hccccccccc----ccchHHHHHHHHH---------HHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence 6666554321 0111111111110 12346677777888888889999888999999999999998899
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 546 LQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 546 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
++..+..++.....+.+++|+++.|+|.||++.|+
T Consensus 285 ls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~ 319 (438)
T COG2270 285 LSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP 319 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce
Confidence 99999999999999999999999999999999985
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.8e-12 Score=131.57 Aligned_cols=263 Identities=10% Similarity=-0.017 Sum_probs=169.3
Q ss_pred hcCChhHHHHHHHHHHHhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCccc---c---------
Q psy15142 186 YTKSEVTATMALCLGVAFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTM---D--------- 252 (744)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~---~--------- 252 (744)
...+++.+++..++.|.|.++.-+.++.+++++.| +++++.+++.+.+..+|.+++|++....... +
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 34577888999999999999999999999999987 4699999999999999999998855422210 0
Q ss_pred -hhhHHHhHhhhH-------h----hhh--hhchhhHHH----HH--HHHhhhhcCCCcceehhhhhhcccccchhhhee
Q psy15142 253 -ADMQQKAIDATK-------E----GLE--KFNIEREVA----TY--IKQYFENAYGPYWQCVVGRNFGSYVSFETHYIY 312 (744)
Q Consensus 253 -~~~~~~~~~~~~-------~----~~~--~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (744)
+...+....... . ..+ +.+.+++.. +. .+..+ +++..+. .....+.....-.....+
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l-~~~~~f~yvg~e~~~~~w 162 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAF--QFTHLVL-GALGIFVYVGAEVSAGSF 162 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHH--hhHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 001111111100 0 000 000000000 00 00011 1111122 111111111111111111
Q ss_pred eecccc--cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHH
Q psy15142 313 FYLGKV--KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRIC 390 (744)
Q Consensus 313 ~~~~~~--~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (744)
...+.. ..+|+++.+.++..+.+..+..++.+..+++.||+|+|+++.++.++.+++.++ ....++.. .....++
T Consensus 163 ~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l--~~~~~~~~-~~~~~~l 239 (310)
T TIGR01272 163 LVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG--AALTHGYV-AMWFVLA 239 (310)
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH--HHHcCCHH-HHHHHHH
Confidence 112222 347899999999999999999999999999999999999988888777776655 23333332 2345567
Q ss_pred HhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHH
Q psy15142 391 QGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCM 456 (744)
Q Consensus 391 ~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~ 456 (744)
.|++.+..+|...+...+..|++ .+++.++. ....+|+.++|.+.|.+.|..|.+..|++..++
T Consensus 240 ~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 240 LGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 89999999999999999988753 45666665 567799999999999999988988888744433
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-10 Score=122.19 Aligned_cols=147 Identities=18% Similarity=0.227 Sum_probs=127.5
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-CCchhhHHHHHHHHHHHHHHHHHhh--cChHHHHHHHHHHhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY-PANRIFGTAIACTSFLHLFVPTAIK--LNPGSVIIVRICQGLVE 395 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~ 395 (744)
+.+|++++++.-+.+.|..-.-+..+++|+++||+ |+|+.+..|.+++++|.+. .+.+ .+...+.++.++.++|.
T Consensus 54 ~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~--L~~~~~~~~~gl~i~L~~I~iG~ 131 (498)
T COG3104 54 DGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLV--LAISSVSGPGGLYIGLALIIVGT 131 (498)
T ss_pred ccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH--HhccccccccHHHHHHHHHHhcc
Confidence 34779999888888888887778889999999997 9999999999999999988 4454 35677888888889999
Q ss_pred hhhhhHHhHHhhhccCcc--chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 396 GVCYPAVHGIWRFWAPPL--ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~--~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
|..=+...+++.|.+|++ +|-.++++++.+.++|+.++|++.+++.+++||...|...++-..+.++..++.
T Consensus 132 Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 132 GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999874 367788999999999999999999999999999999999888877776665544
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-11 Score=142.40 Aligned_cols=108 Identities=10% Similarity=0.019 Sum_probs=93.6
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC-------------------
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK------------------- 188 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~------------------- 188 (744)
+.|++.+.+.+++.++.++.|+++||. |||+.+.+++++.+++.+++++.+
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~----------~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKL----------HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhccc----------CcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 449999999999999999999999999 666688889999999998887652
Q ss_pred --------------------------------ChhHHHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhh
Q psy15142 189 --------------------------------SEVTATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGT 235 (744)
Q Consensus 189 --------------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~ 235 (744)
.+..+++.|++.|++.+...+...+++.|..|+ +|++..|+++.+..
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 134566789999999999999999999999985 69999999999999
Q ss_pred hhhHHHhhhc
Q psy15142 236 IDIFISYIGR 245 (744)
Q Consensus 236 ~g~~~~~~~~ 245 (744)
+|.++|+++.
T Consensus 219 iG~~lG~llg 228 (633)
T TIGR00805 219 FGPAFGYLLG 228 (633)
T ss_pred hhhHHHHHHH
Confidence 9988886643
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-09 Score=111.69 Aligned_cols=240 Identities=14% Similarity=0.055 Sum_probs=161.8
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccC-----CchhhHH-HHHHHHHHHHHHHHH---hhc-------ChH
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYP-----ANRIFGT-AIACTSFLHLFVPTA---IKL-------NPG 382 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~G-----rr~~l~~-~~~~~~~~~~~~~~~---~~~-------~~~ 382 (744)
.+++++....+.+.++..+.. ...+.+|+.+|+.+ ||..+++ |.++++.+..+.|.+ .+. +.+
T Consensus 8 vEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 567887777777777766554 45788999999998 7776654 455555554443322 122 221
Q ss_pred ----HHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHH
Q psy15142 383 ----SVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGL 458 (744)
Q Consensus 383 ----~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~ 458 (744)
...+...+.|+|.+.......++++|..|+++|+++.++.....-+|.+++..+.+.+.+.++-....-+.....+
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~ 166 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL 166 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 2344566789999999999999999999999999999999999999999999999999887664333333222222
Q ss_pred H---HHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 459 L---WYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLF 535 (744)
Q Consensus 459 ~---~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (744)
+ ..++. .+..|.+....... ..++.......+++++.+|+...+.+..+....+++.--..
T Consensus 167 i~~~l~~ia-~wg~E~r~~~~~~~---------------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~i 230 (403)
T PF03209_consen 167 IALLLNLIA-LWGQEPRRSRRAAA---------------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVI 230 (403)
T ss_pred HHHHHHHHH-HHhcccCCcccccC---------------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHH
Confidence 2 22222 22233322211100 00011112335677777887766666666666666666666
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy15142 536 QASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADH 575 (744)
Q Consensus 536 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr 575 (744)
+-.|--+++|+++.+..-+......+..++-.+.|++..|
T Consensus 231 LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~ 270 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR 270 (403)
T ss_pred cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6666677899999999999999999999999999988774
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.6e-10 Score=113.30 Aligned_cols=234 Identities=15% Similarity=0.028 Sum_probs=159.9
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
+++|++..+++.+.........+...+.|.++||+|||+.-++.+++.+++++. -..+++..++++|++.|++....
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~---k~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT---KHSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH---HhccccHHHHHHHHHHHHHHHHH
Confidence 578999999999999888899999999999999999999998888888888765 45688999999999999999999
Q ss_pred hhHHhHHh-hhcc----CccchhHHHHHHH-HHhhhHHHhhHHHHHHhhhccCc--hhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 399 YPAVHGIW-RFWA----PPLERSRLATIAF-CGTYAGIVLGLPISAILTEHFSW--EAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 399 ~~~~~~~~-~e~~----p~~~Rg~~~g~~~-~~~~~g~~ig~~i~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
+.+-.++. .|.- |++..+.-.+... ..+.+-.+++.+++-++.+..+. ..+|....++.++..++.....+|
T Consensus 139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 88887774 4442 3333333333333 23334445555555566665544 788888877777776666555566
Q ss_pred CCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChh
Q psy15142 471 KPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLV-LFQASYLKSTFHLQIQ 549 (744)
Q Consensus 471 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~ 549 (744)
+..+.... .+..+.. ...++.++++|+++.+.+...+.-...+.+. .|.|..- . .+ ...
T Consensus 219 Nyg~~~~~-~~~~~~~----------------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~-~~-~~~ 278 (354)
T PF05631_consen 219 NYGDTSSS-SSLSGSF----------------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-P-DD-EEL 278 (354)
T ss_pred cCCCcccc-cchHHHH----------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-C-CC-CCC
Confidence 64432111 0000111 1235667788999888777777766666665 4566543 2 12 233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy15142 550 ETGFIGSLPHLLMTIVVPCGGMLADH 575 (744)
Q Consensus 550 ~~~~~~~~~~~~~~i~~~~~g~l~dr 575 (744)
--|++++..++..++|+.+..++..+
T Consensus 279 P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 279 PLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 47888888889999998887655543
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-10 Score=124.65 Aligned_cols=293 Identities=12% Similarity=-0.030 Sum_probs=183.0
Q ss_pred hhcccc-c-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHH
Q psy15142 122 KLQFEG-R-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCL 199 (744)
Q Consensus 122 ~~~~~~-~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (744)
.++++. + .|.+.++.+.++.++.+++|+++||+ |-|+++.++++..++..++.+++++.+.+.++|++
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl----------G~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~l 124 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL----------RYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVF 124 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445554 4 59999999999999999999999999 56668889999999999999999999999999999
Q ss_pred HHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhH----------hhhH----
Q psy15142 200 GVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAI----------DATK---- 264 (744)
Q Consensus 200 ~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~---- 264 (744)
.|++.|... +...++..+.|+ +|++++|+.+.+..+|.++++.+.-..... .+..-... ....
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~-gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTL-GWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999 999999999985 799999999999999988886543222111 11100000 0000
Q ss_pred ----hh----------------hhhhchh----hH--HH----H---HHHHhhh----hcCCCcceehhh--hhhccccc
Q psy15142 265 ----EG----------------LEKFNIE----RE--VA----T---YIKQYFE----NAYGPYWQCVVG--RNFGSYVS 305 (744)
Q Consensus 265 ----~~----------------~~~~~~~----~~--~~----~---~~~~~~~----~~~~~~~~~~~~--~~~~~~~~ 305 (744)
+. .+..+.+ .. .+ . .+...+. ++....|-+..+ .+....+.
T Consensus 203 P~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~ 282 (511)
T TIGR00806 203 KRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLIT 282 (511)
T ss_pred CCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHH
Confidence 00 0000000 00 00 0 0111111 221122222211 11111122
Q ss_pred chhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHH
Q psy15142 306 FETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVI 385 (744)
Q Consensus 306 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (744)
.+....+-.....++ .--|.+-++..+..++.++..|++-.++.+---+.++.+...-+.+++-++..+|.+...
T Consensus 283 ~Y~Q~LW~~v~~~~~-----~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y 357 (511)
T TIGR00806 283 YYVHTLWGTLDESLN-----KYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLY 357 (511)
T ss_pred HHHHHHHHHcCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHH
Confidence 222111111111111 122555666677778888899998666644333444433333233232267788999999
Q ss_pred HHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHH
Q psy15142 386 IVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIV 431 (744)
Q Consensus 386 ~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ 431 (744)
++.++.+.......++...-++.....+.-|..+|+..+...+=..
T Consensus 358 ~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQt 403 (511)
T TIGR00806 358 VTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKT 403 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHH
Confidence 9999998888888888888888888777778888887765444333
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2e-10 Score=128.85 Aligned_cols=109 Identities=14% Similarity=0.022 Sum_probs=88.7
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc------CChhHH
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT------KSEVTA 193 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~------~~~~~~ 193 (744)
..++++... +++.++... ..++.+++|+++||+ |||++++++.++.+++.++++++ .+.+.+
T Consensus 55 ~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~----------G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l 123 (591)
T PTZ00207 55 ARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYL----------GPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL 123 (591)
T ss_pred HHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHh----------CcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence 334555433 666665433 345677899999999 78889999999999999999987 578889
Q ss_pred HHHHHHHHHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHH
Q psy15142 194 TMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFI 240 (744)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~ 240 (744)
.+.|++.|++.+...++....+.++.|++||++.|+...+.++|+++
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888999999999999999988888753
|
|
| >KOG2816|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.3e-09 Score=114.48 Aligned_cols=258 Identities=17% Similarity=0.058 Sum_probs=168.0
Q ss_pred HHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhh--hhhhhhHHhHHhhhccCcc
Q psy15142 336 FWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLV--EGVCYPAVHGIWRFWAPPL 413 (744)
Q Consensus 336 ~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~--~~~~~~~~~~~~~e~~p~~ 413 (744)
.+...+.++..|.++||+|||..+....+...+..+. ..+.. +|.++ +.++. .+.......+++++....+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~--~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALC--LLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHH--HHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 5666778888999999999999999888877776665 22322 33332 33332 2455677899999999999
Q ss_pred chhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhccc
Q psy15142 414 ERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSS 493 (744)
Q Consensus 414 ~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~ 493 (744)
.|....|+.......+..++|.+++.+....|.-..|.+.++..++..+...+++||+-.+....+ +.... ...+..
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~--~~~~~~ 221 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRE--LTPGSL 221 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccc--cCCCcc
Confidence 999999999999999999999999999999999999999999888888888888888754433211 00000 000000
Q ss_pred ccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHH-H
Q psy15142 494 VQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYL-LVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGG-M 571 (744)
Q Consensus 494 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g-~ 571 (744)
... ............-.+|..+.+++..+........ ..-..+.|+...+|++..+.+.+.+.......++.++.. .
T Consensus 222 ~~~-~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~ 300 (463)
T KOG2816|consen 222 DSS-HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPL 300 (463)
T ss_pred cch-hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000111111123444433333333222221 111234556667899999999888888888988887766 6
Q ss_pred HhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchHH
Q psy15142 572 LADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVT 614 (744)
Q Consensus 572 l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (744)
+...++.++ ....|++.-.+..+...+....|.
T Consensus 301 l~~~l~~~~----------~i~lGl~~~~~~~~~~af~~~~w~ 333 (463)
T KOG2816|consen 301 LSSILGEKR----------LISLGLLSEFLQLLLFAFATETWM 333 (463)
T ss_pred HHHHHhhhh----------HhhHHHHHHHHHHHHHHHhccchh
Confidence 777777662 666677777776666666655544
|
|
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.1e-09 Score=111.81 Aligned_cols=333 Identities=14% Similarity=0.064 Sum_probs=200.9
Q ss_pred ccccc--cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC--ChhHHHHHHHHH
Q psy15142 125 FEGRT--GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK--SEVTATMALCLG 200 (744)
Q Consensus 125 ~~~~~--g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 200 (744)
+|.+. ++..+-..+ -.+..+++||++||+- |+|+.+++|.++.+++.++.+..+ +...+.+...+.
T Consensus 58 ~~~~~A~~l~~~y~sl-VY~t~i~GG~laDr~L---------G~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I 127 (498)
T COG3104 58 FDETHATGLFSAYGSL-VYLTPIIGGWLADRVL---------GTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALI 127 (498)
T ss_pred cChHhhHHHHHHHHHH-HHHHHHHHHHHHHHhc---------chhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHH
Confidence 55433 444333333 3456789999999982 788889999999999999999874 667777878888
Q ss_pred HHhhhcccccccccccccCcc---hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHH--------------------
Q psy15142 201 VAFSGFAISGYNVNHLDIAPR---YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQ-------------------- 257 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p~---~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------------------- 257 (744)
++|.|+.=+...+++.|.-|+ +|-..++++.++.|+|++++|++.......-.+...
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 899999999999999998863 366677888888888877776643211110000000
Q ss_pred ----------------Hh--------HhhhHhhh-hhhchhhHHH------------HHHHHhhhh----cCCCcceehh
Q psy15142 258 ----------------KA--------IDATKEGL-EKFNIEREVA------------TYIKQYFEN----AYGPYWQCVV 296 (744)
Q Consensus 258 ----------------~~--------~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~ 296 (744)
.. ........ -.....+... ..+.+.+.+ ..+++....+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~ 287 (498)
T COG3104 208 HVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAI 287 (498)
T ss_pred hhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHH
Confidence 00 00000000 0000000000 001111110 1112222111
Q ss_pred hh------hhcccccchhhheeeeccc-ccc-cccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCch-------hhHH
Q psy15142 297 GR------NFGSYVSFETHYIYFYLGK-VKH-INWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANR-------IFGT 361 (744)
Q Consensus 297 ~~------~~~~~~~~~~~~~~~~~~~-~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~-------~l~~ 361 (744)
-+ ++..+....+....+.... ..+ +|+ .-..++..+...+..++.+++..++.-+.++++ =+.+
T Consensus 288 ~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~-~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFal 366 (498)
T COG3104 288 PLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGF-EVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFAL 366 (498)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHhhcccccce-ecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHH
Confidence 11 1112222222222222211 122 332 123467788888888888888888877755441 2345
Q ss_pred HHHHHHHHHHHHHHH---hh-----cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhh
Q psy15142 362 AIACTSFLHLFVPTA---IK-----LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLG 433 (744)
Q Consensus 362 ~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig 433 (744)
+.++++.+.+++... .. .+.++++...+++++|.-+..|+..++++...|++..+..++++......|..++
T Consensus 367 Gl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~ 446 (498)
T COG3104 367 GLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLG 446 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhh
Confidence 566666666553222 11 2567788899999999999999999999999999999999999999999999888
Q ss_pred HHHHHH------hhhccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 434 LPISAI------LTEHFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 434 ~~i~~~------l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
..+++. ..+.......|+.++...++..+..+...
T Consensus 447 g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 447 GQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred ceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 887773 23344556777777777777666655443
|
|
| >KOG2816|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-08 Score=109.89 Aligned_cols=296 Identities=14% Similarity=0.004 Sum_probs=190.2
Q ss_pred ccccccch----HHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHH--
Q psy15142 129 TGFIGSLP----HLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVA-- 202 (744)
Q Consensus 129 ~g~~~~~~----~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (744)
++...... .+...+.+++.|.++||+ |||..+.+.++...+..+...+.. ||+.+ +.++
T Consensus 60 ~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~----------grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g 124 (463)
T KOG2816|consen 60 NGLLLGVKQVTAGLLTLISSPLIGALSDRY----------GRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSG 124 (463)
T ss_pred hhhhhhHHHHhhHHHHHHHHhhhHHhhhhh----------hhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hccccc
Confidence 35555555 678889999999999999 777788777776666655555554 45544 2222
Q ss_pred hhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhh----HHHhH------hhhHhhhhhhc
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKSTMDADM----QQKAI------DATKEGLEKFN 271 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~ 271 (744)
+.+...+...++++|++.. +|....|+.+.+...+..+++............. ..... .......+..+
T Consensus 125 ~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 125 GFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred chhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 2233566788999999974 6999999999988777777766433222111100 00000 00000000000
Q ss_pred hh-----------------hHHHHHHHHhhh-hcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHH
Q psy15142 272 IE-----------------REVATYIKQYFE-NAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDS 333 (744)
Q Consensus 272 ~~-----------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 333 (744)
.+ ....+..+.... ++.+..+.+.+...+..........-..+.+....++++..+.+.+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~ 284 (463)
T KOG2816|consen 205 EKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLS 284 (463)
T ss_pred ccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHH
Confidence 00 000111111111 112222222222222222211111101133346789999999999888
Q ss_pred HHHHHHHHhhhhhH-HhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCc
Q psy15142 334 SFFWGYLITQVPGG-FFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPP 412 (744)
Q Consensus 334 ~~~~~~~~~~~~~g-~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~ 412 (744)
.......+++++.. .+...+|-|+++..|++.-.+..++ .+++++.|+++...++.++. ....|...+.++.+..+
T Consensus 285 ~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~--~af~~~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~ 361 (463)
T KOG2816|consen 285 LVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLL--FAFATETWMMFAAGVVVALA-GIVFPAIRAFASILVSP 361 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHH--HHHhccchhhhHHHHHHHhh-cchhHHHHhHHHhhccc
Confidence 88888888887765 7888899999999999988888888 78888988888777766554 56788899999999999
Q ss_pred cchhHHHHHHHHHhhhHHHhhHHHHHHhhh
Q psy15142 413 LERSRLATIAFCGTYAGIVLGLPISAILTE 442 (744)
Q Consensus 413 ~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~ 442 (744)
+++|+..++......+..+++|.+-+.+..
T Consensus 362 ~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 362 EEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred ccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999988877653
|
|
| >KOG2325|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.6e-08 Score=103.30 Aligned_cols=225 Identities=13% Similarity=0.084 Sum_probs=147.4
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCC-chhhHHHHHHHHHHHHHH-HHHh-hc-ChHHHHHHHHHHhhhh
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPA-NRIFGTAIACTSFLHLFV-PTAI-KL-NPGSVIIVRICQGLVE 395 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Gr-r~~l~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~l~G~~~ 395 (744)
|.+.+.+..|++.++..++.+++++..|+...|.|. |+.++.|.++++++.++- .... .+ ..+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 466777788999999999999999999999999986 777888888888888773 1122 22 4678899999999997
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-------c------CchhHHHHHHHHHHHHHH
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-------F------SWEAMFYFYGCMGLLWYL 462 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-------~------gw~~~f~~~~~~~~~~~~ 462 (744)
+.. ...-+|+++....++|.++++....+..+|..+||.+...+... . -+..+-|+++++.++.++
T Consensus 145 ~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 145 GNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred ccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 654 56889999988889999999998888888888888877655321 0 134566777888777777
Q ss_pred HHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 463 CWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKS 542 (744)
Q Consensus 463 ~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 542 (744)
+..++.+|.++.......++.++.+ .+.+..+..+.++ ...+.+.+..+...+....+-+..+.+...
T Consensus 224 ~i~~~f~E~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~ 291 (488)
T KOG2325|consen 224 IILFFFKEVYRGIIDKKKRSVEEEK------SDIEKVKKPKLDW------VAVLVCIFLRFVVNFIATTIETLSSALTMV 291 (488)
T ss_pred HHHhheeecccCccccccccchhhc------cchhhhccCChhH------HHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 7766667765543222111110000 0000000111112 122344455555555555555555555555
Q ss_pred hcCCChhhHHHHHHH
Q psy15142 543 TFHLQIQETGFIGSL 557 (744)
Q Consensus 543 ~~g~s~~~~~~~~~~ 557 (744)
.++.+..++....+.
T Consensus 292 ~y~w~~~~av~~~gi 306 (488)
T KOG2325|consen 292 MYGWTGSEAVLYNGI 306 (488)
T ss_pred HhccccchHHHhhhh
Confidence 577766666555443
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.1e-07 Score=91.93 Aligned_cols=177 Identities=10% Similarity=-0.002 Sum_probs=119.5
Q ss_pred ceehhhhhhcccccchh-hheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHH
Q psy15142 292 WQCVVGRNFGSYVSFET-HYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLH 370 (744)
Q Consensus 292 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~ 370 (744)
|...++..+.+...+.. .+..+....++.+|+|+++...+.+.-.+|..+| ++.|.+.|++|++.++++|.+...++.
T Consensus 2 W~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 2 WLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred hhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 44444333333333222 3344555557889999999999999999998775 789999999999999999999998888
Q ss_pred HHHHHHhh-----cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC
Q psy15142 371 LFVPTAIK-----LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS 445 (744)
Q Consensus 371 ~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g 445 (744)
.++..... .+.+.+.+..++.|.+.............+.|| +.||++.|+.-....+++.+-..+...+... +
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~ 158 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-D 158 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-C
Confidence 77433332 245566666666666665555666666778888 6899999999999999988877776666554 2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 446 WEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 446 w~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
-...+.+.++...+..++..++++..
T Consensus 159 ~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 159 PSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHhhheecc
Confidence 22333444444433333333343433
|
|
| >KOG2325|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.6e-09 Score=113.35 Aligned_cols=347 Identities=12% Similarity=-0.005 Sum_probs=189.8
Q ss_pred eEeeccccchhhhhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHH-H-
Q psy15142 109 IISFGMKCNLGFAKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVV-A- 185 (744)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~-~- 185 (744)
+.+..+-+|+.....+.+.+- |++.++..++..++++++|+.+.|.++ .|| .++.+.++..++.++. +
T Consensus 52 I~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~--------~k~-Pli~s~ii~~~g~llY~~l 122 (488)
T KOG2325|consen 52 IYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGS--------VKK-PLIVSFLIAIIGNLLYLAL 122 (488)
T ss_pred EEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCC--------ccc-CHHHHHHHHHHHHHHHHHH
Confidence 344445455442223333343 999999999999999999999998732 244 4556777777777777 3
Q ss_pred -hc-C-ChhHHHHHHHHHHHhhhcccccccccccccC-cchhhHHHHHHhhhhhhhhHHHhhhccCCcccch--------
Q psy15142 186 -YT-K-SEVTATMALCLGVAFSGFAISGYNVNHLDIA-PRYASILMGMSNGIGTIDIFISYIGRRGKSTMDA-------- 253 (744)
Q Consensus 186 -~~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~-p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-------- 253 (744)
+. + ..+.++++|++.|+|.|. .+..-+|+++.+ ++.|-++++..+.+..+|.++||.+......+.+
T Consensus 123 ~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~ 201 (488)
T KOG2325|consen 123 AYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPG 201 (488)
T ss_pred HhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCc
Confidence 22 3 456777889999998775 345667777866 5678888888888778887777764432211111
Q ss_pred --------hhHHHhH-hh-----hHhhhhhhchh---hHH-----HHHHHHhhhhcCCCcceehhhhhhcccc---cchh
Q psy15142 254 --------DMQQKAI-DA-----TKEGLEKFNIE---REV-----ATYIKQYFENAYGPYWQCVVGRNFGSYV---SFET 308 (744)
Q Consensus 254 --------~~~~~~~-~~-----~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 308 (744)
..+--.. .. ..-.+++...+ ++. .+.-.+.. +..+.-|...+...+..+. .+..
T Consensus 202 ~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~vc~~~~~~~~~~~~~ 280 (488)
T KOG2325|consen 202 LIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKV-KKPKLDWVAVLVCIFLRFVVNFIATT 280 (488)
T ss_pred ceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccchhhh-ccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00 00001111100 000 00000001 1111112222222222221 1111
Q ss_pred hheeeecccccccccCchhhHHHHHHHHHHHH----HhhhhhHHhh-hccCCchhhHHHHHHHHHHHHHH--HHHh----
Q psy15142 309 HYIYFYLGKVKHINWTVAQESAVDSSFFWGYL----ITQVPGGFFA-SRYPANRIFGTAIACTSFLHLFV--PTAI---- 377 (744)
Q Consensus 309 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~----~~~~~~g~l~-Dr~Grr~~l~~~~~~~~~~~~~~--~~~~---- 377 (744)
.-..........++++.++.-...+....... ...+..+... -++..|+.+..++++......+. |..+
T Consensus 281 iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~p 360 (488)
T KOG2325|consen 281 IETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGP 360 (488)
T ss_pred HHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccc
Confidence 11112222245677777766554443333222 2222222222 23344555555544333333221 1111
Q ss_pred -----------------------hcChHHHHHH-HHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhh
Q psy15142 378 -----------------------KLNPGSVIIV-RICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLG 433 (744)
Q Consensus 378 -----------------------~~~~~~~~~~-~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig 433 (744)
..+.+.+++. -++.|.+.-.......++-+|...++.+++..|++.....++..++
T Consensus 361 v~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~ 440 (488)
T KOG2325|consen 361 VQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVG 440 (488)
T ss_pred cccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhh
Confidence 0012223333 3345666555566788889999999999999999999999999999
Q ss_pred HHHHHHhhhccCchhHHHHHHHHHHHHHHHHHh
Q psy15142 434 LPISAILTEHFSWEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 434 ~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 466 (744)
|++...+....|.++.+.+.+...++...++..
T Consensus 441 ~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~ 473 (488)
T KOG2325|consen 441 PIFSTAIFTLSGPRPVWIILLCLLLVVAALWIV 473 (488)
T ss_pred HHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 999999988889888887777666655544433
|
|
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.7e-06 Score=88.71 Aligned_cols=291 Identities=12% Similarity=0.055 Sum_probs=179.9
Q ss_pred ccccCchhhH-HHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 320 HINWTVAQES-AVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 320 ~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
+.|++..+.. -+.-...-.+.+..++...+.|..|.|++++++.+...+..++ ..+.++...+-+..++.|++.+.
T Consensus 34 ~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~l--ll~~~sv~~mq~~q~~yg~~~a~- 110 (412)
T PF01770_consen 34 DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLL--LLFGTSVLAMQLMQFFYGLATAA- 110 (412)
T ss_pred ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH--HHHHCcHHHHHHHHHHHHHHHHH-
Confidence 3677777653 2333334445667788999999999999999998887777776 56778999999999999998776
Q ss_pred hhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc--cCchhHHHHHHHHHHHHHHHHHhhcccCCCC--
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH--FSWEAMFYFYGCMGLLWYLCWLWLSFEKPCL-- 474 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~-- 474 (744)
..+..+|+--..|+++--++.+...+..-+|..++.+++-.+... .++.....+......+.+++.+++ |..++.
T Consensus 111 evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL-P~~~~S~~ 189 (412)
T PF01770_consen 111 EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL-PMPKRSLF 189 (412)
T ss_pred HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCcccc
Confidence 456778887788888878888888888888888888877766553 334445444444444444444444 544321
Q ss_pred -CCCCCh-H-----HHHHHHHhhccc-ccccCCCCC-----------CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 475 -HPTISG-R-----ELLYIEKSLGSS-VQVAMPTLA-----------TTPWREFAHSMPVYAIIVANFCRSWNFYLLVLF 535 (744)
Q Consensus 475 -~~~~~~-~-----~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (744)
++.... + +.+...+..... ...+.+... ...+++..++|.++...+-+.+...+++.+.+|
T Consensus 190 f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nY 269 (412)
T PF01770_consen 190 FHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINY 269 (412)
T ss_pred eeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHH
Confidence 111100 0 000000000000 000000000 112344456777777777777777778777777
Q ss_pred HHHHHHHh--cCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchH
Q psy15142 536 QASYLKST--FHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV 613 (744)
Q Consensus 536 ~p~~l~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (744)
.....++. -+-+..-.|.+-++..+.+.++.+..|++..++.+-. ...+....++.+.+++++.+.++.+
T Consensus 270 vQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~--------~l~l~~~S~l~a~~L~lm~~t~~Iw 341 (412)
T PF01770_consen 270 VQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG--------ELALGVFSLLQAGLLFLMSFTGNIW 341 (412)
T ss_pred HHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH--------HHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 77776653 1233344677777778888888888898855554432 2344444455566666667777776
Q ss_pred HHHHHHHHH
Q psy15142 614 TATMALCLG 622 (744)
Q Consensus 614 ~~~~~~~~~ 622 (744)
...+.+.+.
T Consensus 342 v~Y~~yIif 350 (412)
T PF01770_consen 342 VCYAGYIIF 350 (412)
T ss_pred HHHHHHHHH
Confidence 655554443
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.8e-06 Score=97.48 Aligned_cols=147 Identities=13% Similarity=0.094 Sum_probs=116.3
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc-cCCchhhHHHHHHHHHHHHHHHHHhhcC--------hHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASR-YPANRIFGTAIACTSFLHLFVPTAIKLN--------PGSVIIVR 388 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 388 (744)
.+.+|++.+.+..+...+....-+..+++|+++|+ +|+++.+.++.++..++.+++ +++.. ....+++.
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~ll--ai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALL--SFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH--HhccCcccccchHHHHHHHHH
Confidence 35678888888888888888788888999999997 599999999999988888774 33211 12355667
Q ss_pred HHHhhhhhhhhhHHhHHhhhccCcc---chhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-------CchhHHHHHHHHHH
Q psy15142 389 ICQGLVEGVCYPAVHGIWRFWAPPL---ERSRLATIAFCGTYAGIVLGLPISAILTEHF-------SWEAMFYFYGCMGL 458 (744)
Q Consensus 389 ~l~G~~~~~~~~~~~~~~~e~~p~~---~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-------gw~~~f~~~~~~~~ 458 (744)
.+..+|.|++-|...+...|.++++ +|-....+++.+.++|+.+++.+.+++.+.+ +|...|.+.+++.+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 7788899999999999999999754 3677888899999999999999999887443 69899988888877
Q ss_pred HHHHHHHh
Q psy15142 459 LWYLCWLW 466 (744)
Q Consensus 459 ~~~~~~~~ 466 (744)
+..++...
T Consensus 173 ia~lvf~~ 180 (654)
T TIGR00926 173 LALIVFMA 180 (654)
T ss_pred HHHHHHHH
Confidence 77655543
|
|
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.5e-07 Score=98.23 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=113.4
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc---C--CchhhHHHHHHHHHHHHHHHHHh---hcChHHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY---P--ANRIFGTAIACTSFLHLFVPTAI---KLNPGSVIIVRI 389 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~---G--rr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 389 (744)
.+++|+++++...+.++..+...+- ++.|.++|-+ | ||+-++++.++.+++.+.+ ... ..+.....+..+
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~-~~~~~~~~s~~~~~~~l~ 94 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVL-ALLPASESSAAIAVVLLF 94 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHH-HhcccccchhhhHHHHHH
Confidence 5789999999888888777776554 5689999987 3 4444455665554444332 111 124555566667
Q ss_pred HHhhhhhhhhhHHhHHhhhccC--ccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 390 CQGLVEGVCYPAVHGIWRFWAP--PLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 390 l~G~~~~~~~~~~~~~~~e~~p--~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
+..+|......++.+++.|... ++.||...+.......+|.+++..++|.+.+..+++..|.+.+++.++..+..+++
T Consensus 95 la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 95 LASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred HHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 7888888889999999999873 23478888999999999999999999999999999999999888887776666666
Q ss_pred ccc
Q psy15142 468 SFE 470 (744)
Q Consensus 468 ~~e 470 (744)
.+|
T Consensus 175 ~~e 177 (433)
T PF03092_consen 175 LEE 177 (433)
T ss_pred hhh
Confidence 555
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.1e-07 Score=98.39 Aligned_cols=323 Identities=15% Similarity=0.092 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc----CChhHHHHHHHHHHHhhhcccccccccccc
Q psy15142 142 IVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT----KSEVTATMALCLGVAFSGFAISGYNVNHLD 217 (744)
Q Consensus 142 ~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e 217 (744)
..+++.|.++|-+--.|. .||+.++++.++.+++.+.++.. .+...+.++.++..++....-..+-++..|
T Consensus 39 ~~Kp~~g~lsD~~pi~G~-----rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE 113 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIFGY-----RRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVE 113 (433)
T ss_pred HHhhhHHhhcccccccCC-----cchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 458899999999854443 57788888887776655555543 245566667777888888888888889999
Q ss_pred cCc---chhhHHHHHHhhhhhhhhHHHhhhccCCcc-cc-hhhHH--HhHhh-----hHhhhhh---------h--chh-
Q psy15142 218 IAP---RYASILMGMSNGIGTIDIFISYIGRRGKST-MD-ADMQQ--KAIDA-----TKEGLEK---------F--NIE- 273 (744)
Q Consensus 218 ~~p---~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~-~~-~~~~~--~~~~~-----~~~~~~~---------~--~~~- 273 (744)
.+. ..||...+....+..+|++++..+...... .+ ..... ..... .....++ . ..+
T Consensus 114 ~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~ 193 (433)
T PF03092_consen 114 LARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEE 193 (433)
T ss_pred HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccc
Confidence 884 247888888888888888877543321111 11 00000 00000 0000010 0 000
Q ss_pred -hH----HHHHHHHhhhh-cCCCcceehh-hhhhcccccchh-h-heeeecccccccccCchhhHHHHHHHHHHHHHhhh
Q psy15142 274 -RE----VATYIKQYFEN-AYGPYWQCVV-GRNFGSYVSFET-H-YIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQV 344 (744)
Q Consensus 274 -~~----~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 344 (744)
.. .++...+.++- ..+..|...+ ..++........ . ..++........|+++...+.+..+..++..++..
T Consensus 194 ~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~ 273 (433)
T PF03092_consen 194 VPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGIL 273 (433)
T ss_pred cchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 00 11111111110 0111222222 122211111111 1 11221111112337888888888778888888888
Q ss_pred hhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhh---------cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccch
Q psy15142 345 PGGFFASRYPANRIFGTAIACTSFLHLFVPTAIK---------LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLER 415 (744)
Q Consensus 345 ~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~R 415 (744)
+..+..-+..-|+++.++.++.++..+.- ..+. ++.+..+.--++..+.....+-....+++|..|+..-
T Consensus 274 ~y~~~~~~~~~R~~~~~t~~~~~~~~l~~-~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~E 352 (433)
T PF03092_consen 274 LYRKYFSNWSWRRIFVVTTLVSVLASLFD-LLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSE 352 (433)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHhccc-EEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCch
Confidence 88777777788888877777666554431 0111 1112223334455555555566677889999999999
Q ss_pred hHHHHHHHHHhhhHHHhhHHHHHHhhhccCc--------hhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 416 SRLATIAFCGTYAGIVLGLPISAILTEHFSW--------EAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 416 g~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw--------~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
|+..++.....++|..++..++..+.+.++. .+..++..++.++.+.+..++ |+.
T Consensus 353 gt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lL-p~~ 415 (433)
T PF03092_consen 353 GTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLL-PPQ 415 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 9999999999999999999999988876552 233444444544444444344 543
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=85.81 Aligned_cols=106 Identities=18% Similarity=0.096 Sum_probs=92.5
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhcccc
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAIS 209 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 209 (744)
|++.+...++..++++++|+++||+ |||+.+..+..+..++.++..++++.+...+.+++.|++.+...+
T Consensus 1 g~~~~~~~~~~~~~~~~~g~~~d~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 70 (141)
T TIGR00880 1 GLLLAGYALGQLIYSPLSGLLTDRF----------GRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALV 70 (141)
T ss_pred CEEEEeehhHHHHHHhhHHHHHhhc----------chhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 4667888899999999999999999 666677788888888888888888988888899999999998888
Q ss_pred cccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhc
Q psy15142 210 GYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGR 245 (744)
Q Consensus 210 ~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~ 245 (744)
...+++.|..|+ +|++..|+.+....+|..+++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 107 (141)
T TIGR00880 71 AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLG 107 (141)
T ss_pred hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhH
Confidence 888999999985 699999999999999998887643
|
|
| >KOG3762|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.6e-07 Score=100.57 Aligned_cols=147 Identities=17% Similarity=0.165 Sum_probs=128.9
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
++++-.+...|........+-++.-++.+++..|+|+-+++.+++++.++=.+. .+...|+|+.+..-+++|+..+.+
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~--~S~L~n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLY--YSYLQNPWMVLPIEILQGITHALI 476 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHH--HHHhcCchheeeHHHHHHHHHHHH
Confidence 566656666776677777777778888999999999999999999988887777 678899999999999999999999
Q ss_pred hhHHhHHhhhccCccchhHHHHHHH-HHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 399 YPAVHGIWRFWAPPLERSRLATIAF-CGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~Rg~~~g~~~-~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
+.++.+|++...||+.|+++.++.+ ....+|-.+|.+++|.+.+.+|-+..|.++++.+++.+++...+
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988 66789999999999999999999999999999888776655443
|
|
| >KOG2563|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.1e-06 Score=86.21 Aligned_cols=326 Identities=9% Similarity=-0.050 Sum_probs=179.5
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCCh------h--HHHHHHHHHH
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSE------V--TATMALCLGV 201 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~ 201 (744)
-+++-++.+.+....+.+-|+.|++ |-|...+++..+-+++..+-..+... + .....-.+.+
T Consensus 82 ~wlsmIym~v~vp~gf~~mw~ldk~----------GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa 151 (480)
T KOG2563|consen 82 DWLSMIYMVVSVPFGFAAMWILDKF----------GLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAA 151 (480)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhccc----------chHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHH
Confidence 6888889999999999999999999 55666777777777776665544322 2 2222333333
Q ss_pred HhhhcccccccccccccC-cchhhHHHHHHhhhhhhhhHHHhhhccCCcccc---hhhHHHh---H---hhh------Hh
Q psy15142 202 AFSGFAISGYNVNHLDIA-PRYASILMGMSNGIGTIDIFISYIGRRGKSTMD---ADMQQKA---I---DAT------KE 265 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~-p~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~---~---~~~------~~ 265 (744)
..+-+....-.-+.+-+. |++|+.+..+-.++..+|.+++.++.-.....+ +...+.. . ... ..
T Consensus 152 ~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~ 231 (480)
T KOG2563|consen 152 AAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALV 231 (480)
T ss_pred HhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332222122222234 468999998888888888888866443222211 1111111 0 000 00
Q ss_pred h--hhh-hchh---hH-------HHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHH
Q psy15142 266 G--LEK-FNIE---RE-------VATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVD 332 (744)
Q Consensus 266 ~--~~~-~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 332 (744)
. ..+ ...+ .. ....+++.+.++ +.....+ ........++..+..... ....-|.+....|++.
T Consensus 232 ~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~--~F~il~~-~ygi~~g~F~~l~~~l~~-~l~~sgY~~~~aG~ig 307 (480)
T KOG2563|consen 232 LFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNR--QFIILAI-CYGIGLGLFNSLSTLLNL-ALCPSGYEGVFAGYIG 307 (480)
T ss_pred HHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCc--cHHHHHH-HHhhhHHHHHHHHHHhhh-ccccccCCccccchhH
Confidence 0 000 0000 00 111222222211 1111111 111111112221111111 1123355567789999
Q ss_pred HHHHHHHHHhhhhhHHhhhccCCch-hhHHHHHHHHHHHHHHH-HH-hhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhc
Q psy15142 333 SSFFWGYLITQVPGGFFASRYPANR-IFGTAIACTSFLHLFVP-TA-IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFW 409 (744)
Q Consensus 333 ~~~~~~~~~~~~~~g~l~Dr~Grr~-~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~ 409 (744)
.+..++.+++++.+|.+.||...-+ +..+......++.+.+. +. .....+.+.....+.|++..+..|+..-+..|.
T Consensus 308 ~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~ 387 (480)
T KOG2563|consen 308 ALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVET 387 (480)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeee
Confidence 9999999999999999999985444 44444444444422210 11 112234455566678888888899988888888
Q ss_pred cCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC----chhHHHHHHHHHHHHHHHHHhhcc
Q psy15142 410 APPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS----WEAMFYFYGCMGLLWYLCWLWLSF 469 (744)
Q Consensus 410 ~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g----w~~~f~~~~~~~~~~~~~~~~~~~ 469 (744)
.-|..-++..|+.+..+.+-+++-.++-+...+..+ |...-+.....+++.+++..++.|
T Consensus 388 TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 388 TYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred ccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 766677778888888888877777877777777655 443344444444555555555543
|
|
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.0004 Score=76.41 Aligned_cols=245 Identities=11% Similarity=0.058 Sum_probs=142.9
Q ss_pred chhhHHHHHHHHHHHHHh-hhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc------------------------
Q psy15142 325 VAQESAVDSSFFWGYLIT-QVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL------------------------ 379 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~-~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~------------------------ 379 (744)
.....++.+...+...+. .++.+++++|++|++++-+....+.+..++....+-+
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 356777777666665555 7889999999999999877666555544442111110
Q ss_pred -----ChHHHHHHHHHHhhhhhhhhh-HHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc--------cC
Q psy15142 380 -----NPGSVIIVRICQGLVEGVCYP-AVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH--------FS 445 (744)
Q Consensus 380 -----~~~~~~~~~~l~G~~~~~~~~-~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~--------~g 445 (744)
+.|...+..+...+......+ .-+++++|.++.++-.+..++...+.++|..+++.+...+.+. ..
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~ 201 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDG 201 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCh
Confidence 122222333334444444444 7889999999999999999999999999999999888887631 12
Q ss_pred ch----hHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHH
Q psy15142 446 WE----AMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVA 521 (744)
Q Consensus 446 w~----~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 521 (744)
|. ..+.+.++.+++...+..++ .+.....+.....+ + +..+.+.+.....+++.++++|.+..+++.
T Consensus 202 ~~~~~~~l~~i~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~-----~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~ 272 (472)
T TIGR00769 202 WHVSLKNLMVIVICSGLAIILLYWWV-NRNVLTDPRSYNPA-----L---KEKKVKPKMSTMESLKFLVSSPYILDLALL 272 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCccccchh-----h---ccccCCCCCCHHHHHHHHHhCHHHHHHHHH
Confidence 32 23333333433333333333 22111111100011 0 000111111123457778899998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhh-HH---HHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 522 NFCRSWNFYLLVLFQASYLKSTFHLQIQE-TG---FIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 522 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-~~---~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
..+.+.+.+.+..-.-..+.+.+ -++.+ .. .+....++..++..++.+++.+|+|-+
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 77777777766655555555543 23322 22 234444555556667778888888865
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2e-05 Score=81.95 Aligned_cols=132 Identities=25% Similarity=0.411 Sum_probs=104.9
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcC--hHHHHHHHHHHhhhhhhhhhHHh
Q psy15142 326 AQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLN--PGSVIIVRICQGLVEGVCYPAVH 403 (744)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~G~~~~~~~~~~~ 403 (744)
...++..+.+.++..+++++.|.++||+|||+.+..+.....++.++ ..+..+ .+.+++.|++.|++.+...+...
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 116 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLL--LALAPNVGLALLLILRLLQGLGGGGLLPVAS 116 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHH--HHhCccchHHHHHHHHHHHHhhhHHHHHHHH
Confidence 46788899999999999999999999999998888877654444444 344444 77888999999999999999999
Q ss_pred HHhhhccCc-cchhHHHHHHHH-HhhhHHHhhHHHHHHhhhc--cCchhHHHHHHHHHHH
Q psy15142 404 GIWRFWAPP-LERSRLATIAFC-GTYAGIVLGLPISAILTEH--FSWEAMFYFYGCMGLL 459 (744)
Q Consensus 404 ~~~~e~~p~-~~Rg~~~g~~~~-~~~~g~~ig~~i~~~l~~~--~gw~~~f~~~~~~~~~ 459 (744)
+++.|++|. +.|+...+.... ...+|..+++.+++.+... .+|+..|.........
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 117 ALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999999998 678998888887 5778888888777766653 5788866665555433
|
|
| >KOG3098|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00028 Score=76.67 Aligned_cols=298 Identities=11% Similarity=-0.006 Sum_probs=170.9
Q ss_pred ccc-ccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 130 GFI-GSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 130 g~~-~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
|.. .++-+....+.+++++.+.|.+ |-|+.++++..+.....+..-+. |-+.+...-.+.|+|.++.+
T Consensus 52 Gy~~~aiiY~~ftv~~l~~psiv~~i----------~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw 120 (461)
T KOG3098|consen 52 GYYGQAIIYAFFTVSCLFAPSIVNFL----------GPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLW 120 (461)
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHh----------hHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHhee
Confidence 555 6888888999999999999999 66778888888877766655544 56677788889999999999
Q ss_pred ccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC----cc--cchhhH-------------HHhHh---hhHh
Q psy15142 209 SGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK----ST--MDADMQ-------------QKAID---ATKE 265 (744)
Q Consensus 209 ~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~----~~--~~~~~~-------------~~~~~---~~~~ 265 (744)
.+.-.+++|.+++ .+.+..++.-.....+.++|-...+.. .. ...... ..... ....
T Consensus 121 ~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~ 200 (461)
T KOG3098|consen 121 TGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAIS 200 (461)
T ss_pred cccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHH
Confidence 9999999999975 477777777666666666553322211 10 101000 00000 0000
Q ss_pred hh-----hhhch-h-------h--HHHHHHHHhhhhcCCCcceehhhhhh-cccccchhhheeeeccc-ccccccCch-h
Q psy15142 266 GL-----EKFNI-E-------R--EVATYIKQYFENAYGPYWQCVVGRNF-GSYVSFETHYIYFYLGK-VKHINWTVA-Q 327 (744)
Q Consensus 266 ~~-----~~~~~-~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~g~s~~-~ 327 (744)
.+ ...+. . . ...+.++..++.-..++.++++..++ .++.......+++.... ....+.+.. -
T Consensus 201 ~l~~i~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~ 280 (461)
T KOG3098|consen 201 VLSIINFDFLPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYL 280 (461)
T ss_pred HHHhhheeecCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhH
Confidence 00 00000 0 0 11111222221111111111111111 11111111111111111 112222222 1
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhh---ccCCchhhHHHHHHHHHHHHHHHHHh----------------hcChHHHHHHH
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFAS---RYPANRIFGTAIACTSFLHLFVPTAI----------------KLNPGSVIIVR 388 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~D---r~Grr~~l~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~ 388 (744)
.+...-...++..++..+.+.+.+ ++||++.+.++.++..++.+++-... .++....++.-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 222233344455555566666665 57999999998888777776632111 11344667778
Q ss_pred HHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHH
Q psy15142 389 ICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAI 439 (744)
Q Consensus 389 ~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~ 439 (744)
++.|++-+......+.++...+ +++|..+.+++-.-..++..++-+..+.
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 8999999999999999999999 5888888888887777777766555443
|
|
| >KOG4332|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00013 Score=71.46 Aligned_cols=236 Identities=11% Similarity=0.021 Sum_probs=125.2
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
..+|+...+++.+..+.....++...+.|-++|+-|||+.-+.-++...++++- -.++.+-.++++|++-|+..+..
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT---KhSpqYkVLmVGR~LGGiaTsLL 141 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT---KHSPQYKVLMVGRVLGGIATSLL 141 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh---hcCCceEEEeehhhhhhHHHHHH
Confidence 456666777777766655566677778899999999999765555544444322 35677888999999999999988
Q ss_pred hhHHhHH-hhhccCccchhHHHHH--------HHHHhhhHHHhhHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHHhh
Q psy15142 399 YPAVHGI-WRFWAPPLERSRLATI--------AFCGTYAGIVLGLPISAILTEHF--SWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 399 ~~~~~~~-~~e~~p~~~Rg~~~g~--------~~~~~~~g~~ig~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
+....++ ++|.. ++|+.-.-+ ...++.+-.+++.+.+-.+.+.+ |--.+|-..+.+..+...+.+--
T Consensus 142 FSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~ 219 (454)
T KOG4332|consen 142 FSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSS 219 (454)
T ss_pred HHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhh
Confidence 8877765 45654 233321111 12334444455555555555554 44455544433333332222211
Q ss_pred cccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy15142 468 SFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAII-VANFCRSWNFYLLVLFQASYLKSTFHL 546 (744)
Q Consensus 468 ~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~ 546 (744)
..|.- ....+.++..++- +...+.+..++++.++. +...+-...+..+..|.|..--+..
T Consensus 220 W~ENy----gdps~~kdlltqf-------------~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e-- 280 (454)
T KOG4332|consen 220 WSENY----GDPSENKDLLTQF-------------KGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE-- 280 (454)
T ss_pred hhhcc----CChhhhHHHHHHh-------------hHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcc--
Confidence 12211 1111222222221 11233444555554333 2222223333333445554211111
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 547 QIQETGFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 547 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
..--|++++-+.+..++|+-+..++..|-..+
T Consensus 281 -~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ 312 (454)
T KOG4332|consen 281 -EIPHGFIFATFMLASMLGSSLASRLLSRSSPK 312 (454)
T ss_pred -cCCchhHHHHHHHHHHHhhHHHHHHHhcCCcc
Confidence 12246777777778888877776666654433
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.0021 Score=70.00 Aligned_cols=244 Identities=14% Similarity=0.046 Sum_probs=132.1
Q ss_pred HHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHH----HHHHhh--c----ChHHHHH---HHHHHhhhhhh-hhh
Q psy15142 335 FFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLF----VPTAIK--L----NPGSVII---VRICQGLVEGV-CYP 400 (744)
Q Consensus 335 ~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~----~~~~~~--~----~~~~~~~---~~~l~G~~~~~-~~~ 400 (744)
-.+..++.++..|.+.||..|.++...+.+..-++..+ ....+. . +.+.... .-.+.|...-. ...
T Consensus 47 ~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~ 126 (432)
T PF06963_consen 47 RSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIA 126 (432)
T ss_pred HHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455667778899999999999887775532222211 101111 1 1122211 11122211111 111
Q ss_pred HHhHHhhhcc------CccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc----cc
Q psy15142 401 AVHGIWRFWA------PPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS----FE 470 (744)
Q Consensus 401 ~~~~~~~e~~------p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~----~e 470 (744)
...+.=-||. ++..+.+..+...-.--+..+++|++.|.+.+..+......+.++..++..++=+++. ..
T Consensus 127 ~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~ 206 (432)
T PF06963_consen 127 NTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNS 206 (432)
T ss_pred hhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122223332 2344455555555556678999999999999888888777777776666554433222 12
Q ss_pred CCCCCCCCChHHHHHHHHhhcccccc----------cCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15142 471 KPCLHPTISGRELLYIEKSLGSSVQV----------AMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYL 540 (744)
Q Consensus 471 ~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 540 (744)
.|.-..+.+.++.+............ .........|+..++.+.+.......++ ++...++...+..|+
T Consensus 207 ~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl 285 (432)
T PF06963_consen 207 VPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYL 285 (432)
T ss_pred ChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHH
Confidence 22111100000000000000000000 0000113456777777766554443333 333445567778888
Q ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 541 KSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 541 ~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
... |+++...|.+-+...+.++.++++..++.+|+|..+
T Consensus 286 ~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr 324 (432)
T PF06963_consen 286 KSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVR 324 (432)
T ss_pred HHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 874 999999999999999999999999999999999664
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >KOG3098|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00086 Score=72.90 Aligned_cols=106 Identities=9% Similarity=0.022 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccC
Q psy15142 332 DSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAP 411 (744)
Q Consensus 332 ~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p 411 (744)
.++.+..+.+++++++.+.|+.|.|+.+.++.....+..+. . +-.|-+-+++.-.+.|+|.+..+...-.|++|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~g--f-l~~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLG--F-LFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHH--H-HhcchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 56667778888999999999999999999999888776655 2 34566778888999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhhhHHHhhHHHHHHh
Q psy15142 412 PLERSRLATIAFCGTYAGIVLGLPISAIL 440 (744)
Q Consensus 412 ~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l 440 (744)
++.+.+..++.......+.++|..+...+
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 99999999999888888888887665444
|
|
| >KOG0637|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=77.78 Aligned_cols=249 Identities=14% Similarity=0.055 Sum_probs=145.2
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc----cCCchhhHHHHH-HHHHHHHHHHHH------hhcC-------
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASR----YPANRIFGTAIA-CTSFLHLFVPTA------IKLN------- 380 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr----~Grr~~l~~~~~-~~~~~~~~~~~~------~~~~------- 380 (744)
..+|++....+.+..+..+...+.+++.|..+|| |||||.++.... ..+++..+++.+ +.++
T Consensus 60 ~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ 139 (498)
T KOG0637|consen 60 QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKP 139 (498)
T ss_pred HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccch
Confidence 5788888888888888888899999999999996 899998766544 444555553221 1111
Q ss_pred --hHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhH-HHHHHHHHhhhHHHhhHHHHHHhhhccCch--hHHHHHHH
Q psy15142 381 --PGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSR-LATIAFCGTYAGIVLGLPISAILTEHFSWE--AMFYFYGC 455 (744)
Q Consensus 381 --~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~-~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~--~~f~~~~~ 455 (744)
...+++...+.-+........+-++++|....+++.+ +.+++..+..+|+.+|..+++.+ +|+ ..|.....
T Consensus 140 rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~ 215 (498)
T KOG0637|consen 140 RAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTA 215 (498)
T ss_pred HHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHH
Confidence 1233344445555666777889999999998877777 99999999999999998888743 333 22222222
Q ss_pred HHHHHHHHHHh-------hcccC------CCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHh--hcHHHHHHHH
Q psy15142 456 MGLLWYLCWLW-------LSFEK------PCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFA--HSMPVYAIIV 520 (744)
Q Consensus 456 ~~~~~~~~~~~-------~~~e~------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~ 520 (744)
+.+.+..+-.. ...++ |.+++...+ . ... +.+... .+ ........+ ..|+.+.+++
T Consensus 216 ~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~-~-~~~--~~~~~~---~~--~~~e~fG~~~~mpr~m~~L~i 286 (498)
T KOG0637|consen 216 CDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPK-G-TTA--RSKSSK---LP--FLLEIFGALKVMPRPMRMLLI 286 (498)
T ss_pred HHHHHHHHHHHHHHhhhhhheecccccccccccCCCCC-c-ccc--cccccC---cc--hHHHHhchHhhCChhHHHHHH
Confidence 22222211111 11111 000000000 0 000 000000 00 000000112 2467888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hcCCChhh---------------HH-HHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 521 ANFCRSWNFYLLVLFQASYLKS-TFHLQIQE---------------TG-FIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 521 ~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~~---------------~~-~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
...+..++.+.+..|.+.++-+ .++-++.. .| +=..+..+...+.+...-++++|+|-|+
T Consensus 287 ~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~ 363 (498)
T KOG0637|consen 287 VTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRK 363 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcce
Confidence 9999999999988888887754 34333211 11 1234555667777888888999999443
|
|
| >KOG3810|consensus | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00032 Score=71.57 Aligned_cols=263 Identities=13% Similarity=0.021 Sum_probs=146.7
Q ss_pred HHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHH
Q psy15142 339 YLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRL 418 (744)
Q Consensus 339 ~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~ 418 (744)
+.+.-++.-.+.|-.--|++++.-.+.......+ ..+.++.+.+-+.-++.|...+.- .+.++|+-+..+++++-++
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~--lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIM--LVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHH--HHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHHH
Confidence 3444456667899888888887665555555555 457778888878888888776543 4577888888899999999
Q ss_pred HHHHHHHhhhHHHhhHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccc
Q psy15142 419 ATIAFCGTYAGIVLGLPISAILTEHF--SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQV 496 (744)
Q Consensus 419 ~g~~~~~~~~g~~ig~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 496 (744)
.|...+..-.|...|..++-.+...- ++...=.+......+..++..+ .|..++..--..+++ +....+..+....
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~f-LP~v~rSl~f~~~~~-~~~v~~~e~~~~~ 209 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALF-LPRVKRSLYFHRLED-KISVGDLEEMNPQ 209 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhh-CCCCchhhhhhcccc-cceeccchhcCcc
Confidence 99888888888888777776665432 2333323333333333333333 354432210000000 0000000000000
Q ss_pred cCCCC--------CCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChhhHHHHHHHHHHHHHHHHH
Q psy15142 497 AMPTL--------ATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFH-LQIQETGFIGSLPHLLMTIVVP 567 (744)
Q Consensus 497 ~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g-~s~~~~~~~~~~~~~~~~i~~~ 567 (744)
.+... ....+.+..+||.+..-.+-+.+...+++-+.+|....-.+... -...-.|..=++..+.++++.+
T Consensus 210 ~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~ 289 (433)
T KOG3810|consen 210 ASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAAL 289 (433)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHH
Confidence 00000 00123344567777666666667777777777777666555321 1111233344555566777788
Q ss_pred HHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchHH
Q psy15142 568 CGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVT 614 (744)
Q Consensus 568 ~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (744)
..|++.-.+.|.. ..++.++.+.-+.+++.+..+.+.|+
T Consensus 290 ~~g~l~i~w~r~g--------~~ll~~~s~~~agllf~m~~t~~Iw~ 328 (433)
T KOG3810|consen 290 AAGYLNINWNRWG--------DLLLAVGSAVQAGLLFIMAQTQHIWV 328 (433)
T ss_pred HHHheeeccchhh--------HHHHHHHHHHhhhhhhhhhcccceeh
Confidence 8888766655542 45566665555555555655555443
|
|
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00029 Score=65.22 Aligned_cols=108 Identities=6% Similarity=-0.037 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhcc
Q psy15142 331 VDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWA 410 (744)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~ 410 (744)
-.++.+....+++++.+.+.+++|.|+.+++|.+...+-.+. .+-++.+.++..-++.|++.+..+.....++.+..
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~---~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS---FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 345566667788888899999999999999999888765544 24557788889999999999999999999999999
Q ss_pred CccchhHHHHHHHHHhhhHHHhhHHHHHHhh
Q psy15142 411 PPLERSRLATIAFCGTYAGIVLGLPISAILT 441 (744)
Q Consensus 411 p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~ 441 (744)
+++.|++..++.......+.++|.++...+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888888887765553
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.017 Score=64.17 Aligned_cols=245 Identities=10% Similarity=0.086 Sum_probs=132.9
Q ss_pred chhhHHHHHHHHH-HHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh-------hc-----------------
Q psy15142 325 VAQESAVDSSFFW-GYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI-------KL----------------- 379 (744)
Q Consensus 325 ~~~~~~~~~~~~~-~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~----------------- 379 (744)
++.+..+-....+ ...+..+...+++++++|.+++-+....+.....+.+... .+
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~ 136 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKG 136 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHH
Confidence 4444554443333 3445556789999999999988766555444443321100 00
Q ss_pred -----ChHHHHHHHHHHhhhhhhhhh-HHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh---------cc
Q psy15142 380 -----NPGSVIIVRICQGLVEGVCYP-AVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE---------HF 444 (744)
Q Consensus 380 -----~~~~~~~~~~l~G~~~~~~~~-~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~---------~~ 444 (744)
+.|...+..+..-+-.....+ .-+.+..|.++.++-.+..++...+.++|.++++.+...+.+ ..
T Consensus 137 ~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~ 216 (491)
T PF03219_consen 137 FIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVD 216 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 112222222222222233333 468899999999999999999999999999999888887776 12
Q ss_pred CchhHHHHHH----HHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHH
Q psy15142 445 SWEAMFYFYG----CMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIV 520 (744)
Q Consensus 445 gw~~~f~~~~----~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 520 (744)
.|...+.... +.+++...+..++ .+.....+ +.. .....+.+.+.+.....+++.++++|.+..+++
T Consensus 217 ~~~~~l~~l~~~v~~~g~~i~~~~~~~-~~~vl~~~-----~~~---~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~ 287 (491)
T PF03219_consen 217 AWELSLNSLMGIVLILGIVIILLYRYM-NKNVLTDP-----RFY---PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIAL 287 (491)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcc-----ccc---hhhhcccccCCCccHHHHHHHHHhCHHHHHHHH
Confidence 3543332221 1222222222222 21111100 000 000000011111112245677788898888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhh-H---HHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q psy15142 521 ANFCRSWNFYLLVLFQASYLKSTFHLQIQE-T---GFIGSLPHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 521 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-~---~~~~~~~~~~~~i~~~~~g~l~dr~g~r 579 (744)
...+.+.+.+.+-...-..+++.+- ++.+ + |-.....++..++..++++.+.+|+|.+
T Consensus 288 lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 288 LVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 7777777777666655555555332 2222 2 2334555666666677888888888865
|
One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane |
| >KOG3762|consensus | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0026 Score=68.95 Aligned_cols=74 Identities=11% Similarity=0.011 Sum_probs=51.9
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCcc
Q psy15142 508 EFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGIL 582 (744)
Q Consensus 508 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~ 582 (744)
.++.++....+.+..+..+.+...+.+++=-++++ .|..+..-|...+....+-++.-++.+++.+|+|+-+.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 45666666655666666666666666666556666 465556666666666777788888999999999988743
|
|
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0005 Score=55.38 Aligned_cols=62 Identities=24% Similarity=0.317 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 518 IIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
+-..++....+...+..|+|.|+++ .|+|+.++|++.++..+..+++.++.|.++||.++++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 3455677778888889999999997 7999999999999999999999999999999999984
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=97.58 E-value=1.3e-05 Score=90.31 Aligned_cols=314 Identities=10% Similarity=-0.036 Sum_probs=2.4
Q ss_pred hhhhcccc---cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC--------
Q psy15142 120 FAKLQFEG---RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK-------- 188 (744)
Q Consensus 120 ~~~~~~~~---~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~-------- 188 (744)
..++.|++ +.|++.+.+-++..+..++..++.+|..| -+.+-+|.++.+++.+++++-+
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hr----------prwig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHR----------PRWIGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----------cceeeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 34444554 44999999999999999999999887643 2355567777777666654210
Q ss_pred ------------------------------------------ChhHHHHHHHHHHHhhhcccccccccccccCcc-hhhH
Q psy15142 189 ------------------------------------------SEVTATMALCLGVAFSGFAISGYNVNHLDIAPR-YASI 225 (744)
Q Consensus 189 ------------------------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~ 225 (744)
-++.+++..++.|+|....++...+|+-|.+++ +.+.
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPL 177 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCcc
Confidence 012344456777778777888899999999975 6899
Q ss_pred HHHHHhhhhhhhhHHHhhhccCCcc-------c-----------chh--hHHHhHhh--------------hHhhhhhh-
Q psy15142 226 LMGMSNGIGTIDIFISYIGRRGKST-------M-----------DAD--MQQKAIDA--------------TKEGLEKF- 270 (744)
Q Consensus 226 ~~g~~~~~~~~g~~~~~~~~~~~~~-------~-----------~~~--~~~~~~~~--------------~~~~~~~~- 270 (744)
..|++.++..+|-++|+++.-.... . ++| .||..... ..+.+.+.
T Consensus 178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~ 257 (539)
T PF03137_consen 178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTS 257 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcc
Confidence 9999999999988888664321110 0 111 12211100 00000000
Q ss_pred -----------chhhHHH-------------HHHHHhhh---hcCCCcceehhhhhhcccccchh-hheeeecccccccc
Q psy15142 271 -----------NIEREVA-------------TYIKQYFE---NAYGPYWQCVVGRNFGSYVSFET-HYIYFYLGKVKHIN 322 (744)
Q Consensus 271 -----------~~~~~~~-------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 322 (744)
..++... ..+++... +-..+...+...+.......... ...+.+-+.+.+|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~ 337 (539)
T PF03137_consen 258 ERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFG 337 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0000000 00111110 00001111111111111111111 22223334567899
Q ss_pred cCchhhHHHHHHHHH-HHHHhhhhhHHhhhcc--CCchhhHHHHHHHHHHHHH-HHHH---------------h------
Q psy15142 323 WTVAQESAVDSSFFW-GYLITQVPGGFFASRY--PANRIFGTAIACTSFLHLF-VPTA---------------I------ 377 (744)
Q Consensus 323 ~s~~~~~~~~~~~~~-~~~~~~~~~g~l~Dr~--Grr~~l~~~~~~~~~~~~~-~~~~---------------~------ 377 (744)
.++++++++.++..+ +.++|.+++|++..|+ +.|.++.+..+...++.++ .+.. .
T Consensus 338 ~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~ 417 (539)
T PF03137_consen 338 LSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSS 417 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCC
Confidence 999999998877666 5678889999999997 3455444443333322222 0000 0
Q ss_pred ------------------------------hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhh
Q psy15142 378 ------------------------------KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTY 427 (744)
Q Consensus 378 ------------------------------~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~ 427 (744)
...+..+++..++.-+..+.........+-..+|+++|+.++|+.....+
T Consensus 418 ~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~r 497 (539)
T PF03137_consen 418 SPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIR 497 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHH
Confidence 00122333333343344444444455556688899999999999986655
Q ss_pred -hHHHhhHHHHHHhhhc
Q psy15142 428 -AGIVLGLPISAILTEH 443 (744)
Q Consensus 428 -~g~~ig~~i~~~l~~~ 443 (744)
+|.+-||++.|.+.|.
T Consensus 498 llg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 498 LLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -----------------
T ss_pred hhcCcchHHHHhHHHhh
Confidence 5777799999988874
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >KOG0637|consensus | Back alignment and domain information |
|---|
Probab=97.57 E-value=3.3e-05 Score=81.72 Aligned_cols=111 Identities=14% Similarity=0.009 Sum_probs=76.8
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHH---------------
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTAT--------------- 194 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 194 (744)
+++--..-+...+.+++.|..|||...|.. .||+++..+....++..++.+++.+...++
T Consensus 70 S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G-----RRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~ 144 (498)
T KOG0637|consen 70 SIIWLCGPLSGLLVQPLVGSASDRCTSRYG-----RRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVL 144 (498)
T ss_pred cccccccccccceecccccccccccccccc-----cccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHH
Confidence 444455556667789999999999966642 467788888888889998988876543222
Q ss_pred --HHHHHHHHhhhcccccccccccccCc-chhhH-HHHHHhhhhhhhhHHHhhhc
Q psy15142 195 --MALCLGVAFSGFAISGYNVNHLDIAP-RYASI-LMGMSNGIGTIDIFISYIGR 245 (744)
Q Consensus 195 --~~~~~~~~~~g~~~~~~~~~~~e~~p-~~rg~-~~g~~~~~~~~g~~~~~~~~ 245 (744)
+..-+.-+.......++-++.+|... .++-+ +.+++.+..++|+.+|+...
T Consensus 145 ~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 145 FILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred HHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 11222222333455678899999984 33444 88888888999988887654
|
|
| >KOG3626|consensus | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.011 Score=67.41 Aligned_cols=120 Identities=9% Similarity=0.010 Sum_probs=86.4
Q ss_pred ccchhhhhhcccc---cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc----
Q psy15142 115 KCNLGFAKLQFEG---RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT---- 187 (744)
Q Consensus 115 ~~~~~~~~~~~~~---~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~---- 187 (744)
...+...+..+++ +.|++.+.+-++..+...+..+.+-|.. |=+.+-+|+++.+++.+++++-
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~H----------rPr~Ig~G~~~m~lgsll~alPHf~~ 186 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGH----------RPRWIGIGLVLMGLGSLLFALPHFFS 186 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccC----------ccceeeechhHHHHHHHHHhChHHhc
Confidence 3333445555555 3499999999999999999999888873 3346667888888887777642
Q ss_pred --------------CC---------------------------------hh-HHHHHHHHHHHhhhcccccccccccccC
Q psy15142 188 --------------KS---------------------------------EV-TATMALCLGVAFSGFAISGYNVNHLDIA 219 (744)
Q Consensus 188 --------------~~---------------------------------~~-~~~~~~~~~~~~~g~~~~~~~~~~~e~~ 219 (744)
.+ .+ .+++..++.|+|.....+...+|+-|.+
T Consensus 187 ~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnv 266 (735)
T KOG3626|consen 187 GPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNV 266 (735)
T ss_pred CcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccc
Confidence 00 11 2233466677777667788889999998
Q ss_pred c-chhhHHHHHHhhhhhhhhHHHhhh
Q psy15142 220 P-RYASILMGMSNGIGTIDIFISYIG 244 (744)
Q Consensus 220 p-~~rg~~~g~~~~~~~~g~~~~~~~ 244 (744)
. ++-...+|+..+...+|-++|+++
T Consensus 267 k~~~SplYlgi~~~~~~lGPaiGfll 292 (735)
T KOG3626|consen 267 KKKNSPLYLGILYSMAILGPAIGFLL 292 (735)
T ss_pred cccCCcHHHHHHHHHHHhhhHHHHHH
Confidence 6 468999999999999888877664
|
|
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.1 Score=55.99 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhh
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRF 408 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e 408 (744)
+.+.-+..+...+..+.+.++.+|+.-+.=+..+.++++++.++ .+++++.+.-+++-++.+++.|..-.....+.+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~--va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLL--VAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhh--eeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 44444455566666777888899987555556666677777777 577788888888888888888877766666644
Q ss_pred ccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCc--hhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 409 WAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSW--EAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 409 ~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
.+++ ..++.+..+.+.++++|+..--.+.+ .|+ |..+++..++.++..+..++..|.+
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5553 34666777777788888876655555 454 6677777777666655555555543
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0029 Score=67.70 Aligned_cols=112 Identities=17% Similarity=0.113 Sum_probs=77.9
Q ss_pred chhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH---HHhhcChHHHHHHHHHHhhhhhhhhhH
Q psy15142 325 VAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP---TAIKLNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
..+..+...+|.+|..++.--.. +. |+ |++.+.+.+-..-..+++. .-+.++.+.+++..+..|+..|+.+..
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~-~~-ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLP-FF-RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhccee-ee-eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 45667788888888776643221 11 33 4444443332221111110 223467787888888999999999999
Q ss_pred HhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHh
Q psy15142 402 VHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAIL 440 (744)
Q Consensus 402 ~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l 440 (744)
....+.|-.|+++|-.++|....+-.+|..++.+++-.+
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988877544
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0056 Score=63.84 Aligned_cols=77 Identities=14% Similarity=-0.001 Sum_probs=60.7
Q ss_pred hcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
.+++. +.+.+....+....+.+++.|.++||+ |||+..++..++.++..+ .-..++.+.+++.|+++|
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~----------Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRY----------GRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGG 132 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHH
Confidence 44544 348888999999999999999999999 677677666666666553 445678999999999999
Q ss_pred Hhhhccccc
Q psy15142 202 AFSGFAISG 210 (744)
Q Consensus 202 ~~~g~~~~~ 210 (744)
++.......
T Consensus 133 iaTSLLfS~ 141 (354)
T PF05631_consen 133 IATSLLFSA 141 (354)
T ss_pred HHHHHHHHH
Confidence 999886654
|
|
| >PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0022 Score=69.59 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=86.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhc-C------hHHHHHHHHHHhhhhhhhhhHHhHHhhhccCcc---chhHHHHHHHHHh
Q psy15142 357 RIFGTAIACTSFLHLFVPTAIKL-N------PGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPL---ERSRLATIAFCGT 426 (744)
Q Consensus 357 ~~l~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~---~Rg~~~g~~~~~~ 426 (744)
|+++++.++..+|.+++..+..+ . ...+.++.++.++|.|+.=|...++.+|.++++ +|..+..+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56777888888888774333222 2 246788888999999999999999999999876 4677888999999
Q ss_pred hhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q psy15142 427 YAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 427 ~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 465 (744)
++|..++..+.+++-+++||.+.|.+.++..++..+..+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888777665544
|
The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C. |
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0014 Score=53.36 Aligned_cols=67 Identities=12% Similarity=0.073 Sum_probs=57.8
Q ss_pred ccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHH
Q psy15142 316 GKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSV 384 (744)
Q Consensus 316 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (744)
.+.++.++|.++.+++.+.+++|+.+|++...++.++..+++.+..+.+...+..+. +++.++.+.+
T Consensus 17 ~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~--ma~~~~~~~w 83 (85)
T PF06779_consen 17 LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA--MALTHSFWLW 83 (85)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH--HHHHhchHHH
Confidence 346888999999999999999999999999999999988889999999888888877 6666665543
|
Note that many members are hypothetical proteins. |
| >KOG4332|consensus | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.055 Score=53.54 Aligned_cols=135 Identities=12% Similarity=0.091 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhhccCCc--hhhHHHHHHHHHHHHHHHH-H--hhc---ChHHHHHHHHHHhhhhhhhh
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFASRYPAN--RIFGTAIACTSFLHLFVPT-A--IKL---NPGSVIIVRICQGLVEGVCY 399 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr--~~l~~~~~~~~~~~~~~~~-~--~~~---~~~~~~~~~~l~G~~~~~~~ 399 (744)
-|.+++.+++..++|+-+..++..|-..| ..+.+.+++.++...+ |. . .++ +...-+++..+.-.+.|..+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~L-pilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLL-PILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHH-HHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 48899999999999998888887765444 3344444433333222 11 1 112 22233445555666778889
Q ss_pred hHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q psy15142 400 PAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLC 463 (744)
Q Consensus 400 ~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 463 (744)
|...-+=+++.|.+.|++.+.++..-.++-.-++-..--.-....+-|..|-++.+...+..+.
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 9999999999999999988877765444333222111000000134567777777666555433
|
|
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0021 Score=51.80 Aligned_cols=49 Identities=10% Similarity=0.108 Sum_probs=43.4
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHH
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACT 366 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~ 366 (744)
.++.|+++.++|.+.++..+...++++++|.++||+|+++.++....++
T Consensus 27 ~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 27 LKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3568999999999999999999999999999999999999887665543
|
|
| >COG3202 ATP/ADP translocase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.67 E-value=1.4 Score=48.18 Aligned_cols=247 Identities=11% Similarity=0.030 Sum_probs=134.7
Q ss_pred chhhHHHHHHHHH-HHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh-------------hc-----------
Q psy15142 325 VAQESAVDSSFFW-GYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI-------------KL----------- 379 (744)
Q Consensus 325 ~~~~~~~~~~~~~-~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-------------~~----------- 379 (744)
+..++++-+..-+ +.++..++.+++.+++-+.+++-+.+..+....++.+... +.
T Consensus 60 ae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~ 139 (509)
T COG3202 60 AESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLK 139 (509)
T ss_pred chhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccce
Confidence 4556666666555 5667778889999999999998766665555554422111 00
Q ss_pred ------ChHHHHHHHHHHhhhhhhhhh-HHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhcc-C------
Q psy15142 380 ------NPGSVIIVRICQGLVEGVCYP-AVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHF-S------ 445 (744)
Q Consensus 380 ------~~~~~~~~~~l~G~~~~~~~~-~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~-g------ 445 (744)
+.|...+..++.-+-...... .-+....|.+..++-.+..++++.+.+++..++..+..++..+- .
T Consensus 140 ~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~ 219 (509)
T COG3202 140 WFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFK 219 (509)
T ss_pred eeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHH
Confidence 112222222222222223333 56778899999999999999999999999999988888876521 1
Q ss_pred ---chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHH
Q psy15142 446 ---WEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVAN 522 (744)
Q Consensus 446 ---w~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 522 (744)
.+..+.+.+..++++..+..+.-+......... .+.. +++.+...+.....+.+.++|+|-++.+++..
T Consensus 220 ~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~-------~~~~-~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~v 291 (509)
T COG3202 220 DLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFY-------LRAK-KKKKKKKLKLGLIESFKMILRSKYLGAIALLV 291 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh-------HHHh-cccccccccCcHHHHHHHHHhhhHHHHHHHHH
Confidence 233344444444444444443322211111100 0000 00000001111123566778888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhHHH---HHHHHHHH-HHHHHHHHHHHhHHhhhc
Q psy15142 523 FCRSWNFYLLVLFQASYLKSTFHLQIQETGF---IGSLPHLL-MTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 523 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~---~~~~~~~~-~~i~~~~~g~l~dr~g~r 579 (744)
.+.+.+.+.+-...-.-.+..+-...+..++ +....++. .++...+++-+..|.|-.
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 7777777666544333333322222223332 23344444 444556777777777743
|
|
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.004 Score=64.34 Aligned_cols=105 Identities=14% Similarity=0.041 Sum_probs=83.9
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCC--hhHHHHHHHHHHHhhhc
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS--EVTATMALCLGVAFSGF 206 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 206 (744)
.++..+...++..++.++.|+++||+ |||..+..+.....++.++.++..+ .+.+++.|.+.|++.|.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 110 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRY----------GRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGG 110 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccc----------cchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHH
Confidence 48889999999999999999999999 5655666666544555566666665 77788889988999998
Q ss_pred ccccccccccccCcc--hhhHHHHHHhh-hhhhhhHHHhh
Q psy15142 207 AISGYNVNHLDIAPR--YASILMGMSNG-IGTIDIFISYI 243 (744)
Q Consensus 207 ~~~~~~~~~~e~~p~--~rg~~~g~~~~-~~~~g~~~~~~ 243 (744)
..+...+++.|..|+ +|+...+.... ...+|.++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 111 LLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999986 68999888888 46667676653
|
|
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.089 Score=56.58 Aligned_cols=97 Identities=8% Similarity=-0.142 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhh
Q psy15142 328 ESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWR 407 (744)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 407 (744)
-|.+-++..+.+.++++..|++-.++.+-.-+.++.+....+.++..++..++.+...++.++.+.......++...-++
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA 366 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIA 366 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37777788888888899999997777665555544443333333322577788888888888777776666666666666
Q ss_pred hccCccchhHHHHHHHH
Q psy15142 408 FWAPPLERSRLATIAFC 424 (744)
Q Consensus 408 e~~p~~~Rg~~~g~~~~ 424 (744)
.....+.-|..+|+...
T Consensus 367 ~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 367 KNLSEERYALVFGINTF 383 (412)
T ss_pred HhccccceeeeeeeHHH
Confidence 66665666666665554
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.005 Score=61.88 Aligned_cols=110 Identities=14% Similarity=0.062 Sum_probs=78.6
Q ss_pred hhhcccccc-cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc-------CChhH
Q psy15142 121 AKLQFEGRT-GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT-------KSEVT 192 (744)
Q Consensus 121 ~~~~~~~~~-g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~-------~~~~~ 192 (744)
..+++|.++ ..+.....+|..+| ++.|.+.|++ |-+..+++|.+...++..++..+ .+.|.
T Consensus 30 ~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~----------gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~ 98 (250)
T PF06813_consen 30 SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF----------GPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWL 98 (250)
T ss_pred HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc----------chHHHHHHHHHHHHHHHHHHHHHHhCccCccchHH
Confidence 445666544 88888888998875 8999999999 56667778877777776666532 23455
Q ss_pred HHHHHHHHHHhhhcccccccccccccCcchhhHHHHHHhhhhhhhhHHH
Q psy15142 193 ATMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFIS 241 (744)
Q Consensus 193 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~rg~~~g~~~~~~~~g~~~~ 241 (744)
+.++.++++.+++....++......-.|++||++.|+.-....+++.+-
T Consensus 99 ~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~ 147 (250)
T PF06813_consen 99 MCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIF 147 (250)
T ss_pred HHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHH
Confidence 5556677777766655555444456669899999999988888876654
|
|
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.026 Score=52.27 Aligned_cols=103 Identities=11% Similarity=-0.047 Sum_probs=81.0
Q ss_pred ccc-ccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHHHhhhccc
Q psy15142 130 GFI-GSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAI 208 (744)
Q Consensus 130 g~~-~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (744)
|.. .++.+....+++++.+.+.+++ |.|+.+++|.++..+..+.. +-++.+.++..-.+.|++.+..+
T Consensus 39 G~~slai~Y~~~~~s~l~~P~iv~~l----------g~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW 107 (156)
T PF05978_consen 39 GYYSLAILYGSFAISCLFAPSIVNKL----------GPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLW 107 (156)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHH----------hhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhh
Confidence 443 4777888889999999999999 67778888888887665544 44567777888899999999999
Q ss_pred ccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhh
Q psy15142 209 SGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYI 243 (744)
Q Consensus 209 ~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~ 243 (744)
++.-.++.+.+.+ .+++..|+.-.....+.++|.+
T Consensus 108 ~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~ 143 (156)
T PF05978_consen 108 TAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNL 143 (156)
T ss_pred HhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9988899998865 5888888877777766666644
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.34 Score=53.64 Aligned_cols=75 Identities=15% Similarity=0.030 Sum_probs=56.4
Q ss_pred HHHHHHhhhhhhhhhHHhHHhhhccCc-cchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHH
Q psy15142 386 IVRICQGLVEGVCYPAVHGIWRFWAPP-LERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLW 460 (744)
Q Consensus 386 ~~~~l~G~~~~~~~~~~~~~~~e~~p~-~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~ 460 (744)
+.-++.|+.........-..+.+.+|. ++|+..+|-.+...++...+..++++.+.+.+||.....+.-++.++.
T Consensus 271 ~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 271 LLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344456666666666677778888874 568889998888888888777777799999999998877776665553
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.11 Score=58.59 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=82.1
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHH-HHHHHH-HHHHHHHH--HhhcCh-HHHHHHHHHHhhh
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGT-AIACTS-FLHLFVPT--AIKLNP-GSVIIVRICQGLV 394 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~-~~~~~~-~~~~~~~~--~~~~~~-~~~~~~~~l~G~~ 394 (744)
-+|-+....+.+.+++.+|..+|+.+++++.++.-++....- +..+.+ ++..++.. ...... ..+....++.++.
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 123 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLL 123 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777889999999999999988887643222222111 111111 11111101 111111 1123334556777
Q ss_pred hhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh-hccCchhHHHHHHHHHHHHHH
Q psy15142 395 EGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT-EHFSWEAMFYFYGCMGLLWYL 462 (744)
Q Consensus 395 ~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~-~~~gw~~~f~~~~~~~~~~~~ 462 (744)
.|+..|....+..+... +.-+...|-.+..+.+|+++|.++.+++. ..+|-....++.+.+.+++.+
T Consensus 124 ~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 124 IGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 78888877666654322 23466788889999999999999988765 466755555555555444443
|
|
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.1 Score=42.55 Aligned_cols=78 Identities=14% Similarity=0.077 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHH
Q psy15142 526 SWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVV 605 (744)
Q Consensus 526 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~ 605 (744)
+.+-+.+...+|...++ .++|..+.+++.+...++..+|.+.+.++.++.+++ .+...+++...+.++.
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~----------~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR----------RLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH----------HHHHHHHHHHHHHHHH
Confidence 45566777788988877 699999999999999999999999999888875543 3555666666776666
Q ss_pred HhccCchHH
Q psy15142 606 VAYTKSEVT 614 (744)
Q Consensus 606 ~~~~~~~~~ 614 (744)
..+.++.+.
T Consensus 74 ma~~~~~~~ 82 (85)
T PF06779_consen 74 MALTHSFWL 82 (85)
T ss_pred HHHHhchHH
Confidence 666655443
|
Note that many members are hypothetical proteins. |
| >KOG3574|consensus | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.52 Score=49.47 Aligned_cols=212 Identities=12% Similarity=0.043 Sum_probs=109.3
Q ss_pred hhhHHhhh-----ccCCchhhHHH-HHHHHHHHHHHHH----Hh-----hcChHHHHHHHHHHhhhhhhhhhHHhHHhhh
Q psy15142 344 VPGGFFAS-----RYPANRIFGTA-IACTSFLHLFVPT----AI-----KLNPGSVIIVRICQGLVEGVCYPAVHGIWRF 408 (744)
Q Consensus 344 ~~~g~l~D-----r~Grr~~l~~~-~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e 408 (744)
+++.++.| |+||||..++- -.+.+..++++.. .. .++...+....++.-+..+..-.+.-.+.-.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 57888999 99999965432 2222222222110 01 1222223334455566666666666677777
Q ss_pred ccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh-------ccCc---------hhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 409 WAPPLERSRLATIAFCGTYAGIVLGLPISAILTE-------HFSW---------EAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 409 ~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~-------~~gw---------~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
+..+++-|-+......+...|.+++..+.-.+-. ..+| ...+++.+.+.++...+..++.+|.+
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 7777777766655555555555554433211111 0112 23344555555566555555533332
Q ss_pred CCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHH
Q psy15142 473 CLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETG 552 (744)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 552 (744)
.+ .++|+...+.. ....++++++-|.+..++......-.++.+--...+.-+.+ .|++..+.+
T Consensus 241 ~~---~~~e~~~~i~~-------------~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~La 303 (510)
T KOG3574|consen 241 ES---VDEELELGIHE-------------SYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELA 303 (510)
T ss_pred hh---hhhhhhcCHHH-------------HHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHhe
Confidence 21 11111000000 11234566666777666666666666666666666666666 699888766
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHh
Q psy15142 553 FIGSLPHLLMTIVVPCGGMLADHL 576 (744)
Q Consensus 553 ~~~~~~~~~~~i~~~~~g~l~dr~ 576 (744)
++. ++.+..+++.+++.-|+
T Consensus 304 l~~----v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 304 LIA----VPLVPLQIALPLYIGKW 323 (510)
T ss_pred eee----eehhhHHHhhhhhheee
Confidence 654 44555555555555554
|
|
| >KOG1237|consensus | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.099 Score=59.39 Aligned_cols=146 Identities=10% Similarity=0.038 Sum_probs=107.7
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-CCchhhHHHHHHHHHHHHHHHHHh-----h-------------c
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRY-PANRIFGTAIACTSFLHLFVPTAI-----K-------------L 379 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~-----~-------------~ 379 (744)
..++.+...+.-..+.+.-......+.+++++|-| ||-+++.++.++..++..+++... . .
T Consensus 66 ~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~ 145 (571)
T KOG1237|consen 66 LELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCE 145 (571)
T ss_pred HHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCccc
Confidence 45666666666666667666777778899999976 999999999888877765532111 0 0
Q ss_pred --C---hHHHHHHHHHHhhhhhhhhhHHhHHhhhccC---c-cc--hhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchh
Q psy15142 380 --N---PGSVIIVRICQGLVEGVCYPAVHGIWRFWAP---P-LE--RSRLATIAFCGTYAGIVLGLPISAILTEHFSWEA 448 (744)
Q Consensus 380 --~---~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p---~-~~--Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~ 448 (744)
+ ...+.....+..+|.|+.-|...++-+|-++ + +. +...+.+++...++|..++..+..++-++.||..
T Consensus 146 ~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~l 225 (571)
T KOG1237|consen 146 SPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKL 225 (571)
T ss_pred CcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhccccee
Confidence 1 1234555566778999999999999999998 2 22 2477888899999999999888888878899999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy15142 449 MFYFYGCMGLLWYLCW 464 (744)
Q Consensus 449 ~f~~~~~~~~~~~~~~ 464 (744)
.|.+..++.++..++.
T Consensus 226 gf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 226 GFGIPTVLNALAILIF 241 (571)
T ss_pred eccHHHHHHHHHHHHH
Confidence 9988887776665544
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=94.90 E-value=2 Score=47.15 Aligned_cols=119 Identities=8% Similarity=-0.190 Sum_probs=83.7
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH--HHhhc------ChHHHHHHHHHH
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP--TAIKL------NPGSVIIVRICQ 391 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~l~ 391 (744)
.-|+++...|..-++..+..+.+.+...++.+|+|..|.-+++...-.++..+.. ..... +...++.+-++.
T Consensus 287 ~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~S 366 (432)
T PF06963_consen 287 SQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALS 366 (432)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHH
Confidence 3489999999999999999999999999999999999987777664433322210 11111 122233333333
Q ss_pred hhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHH
Q psy15142 392 GLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISA 438 (744)
Q Consensus 392 G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~ 438 (744)
=+|.=+.--...-++.|..|+++||...|.-....++.-++-..++-
T Consensus 367 R~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 367 RIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444455566778899999999999999999999988887766543
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] | Back alignment and domain information |
|---|
Probab=94.66 E-value=2.4 Score=46.51 Aligned_cols=66 Identities=9% Similarity=-0.058 Sum_probs=40.5
Q ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy15142 507 REFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLR 577 (744)
Q Consensus 507 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 577 (744)
.++++-|++..+++..+..-.++.+--.-...=+.+ .|++.++.+++. +..+...++.|+++-|+.
T Consensus 272 ~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 272 WKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWS 337 (544)
T ss_pred HHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhh
Confidence 345566777766666666666555444444444444 699888766553 455666666666666663
|
This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane |
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=94.46 E-value=2.4 Score=46.80 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=50.6
Q ss_pred ChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHH
Q psy15142 380 NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAI 439 (744)
Q Consensus 380 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~ 439 (744)
+-+..++..++.|+..|-....+..+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566778899999999999999999999999999999888888888888888876543
|
|
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=94.16 E-value=5.6 Score=43.91 Aligned_cols=97 Identities=10% Similarity=-0.006 Sum_probs=48.1
Q ss_pred HHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH--Hh-hc---ChHHHHHHHHHHhhhhhhhhhHHhHHhh
Q psy15142 334 SFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT--AI-KL---NPGSVIIVRICQGLVEGVCYPAVHGIWR 407 (744)
Q Consensus 334 ~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~--~~-~~---~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 407 (744)
...+...+..+..-.+.-|+..|.=+..++++..+..++... .. .+ .++..++.-++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 334444444444555566665433333343332222222101 01 11 2445556667788888888887888777
Q ss_pred hccCccchhHHHHHHHHHhhhHHHhhHH
Q psy15142 408 FWAPPLERSRLATIAFCGTYAGIVLGLP 435 (744)
Q Consensus 408 e~~p~~~Rg~~~g~~~~~~~~g~~ig~~ 435 (744)
.+|++ .++....+.+++++++.+
T Consensus 133 -~fp~~----~~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 133 -VFPST----YSSAVMSGQGLAGVLTSL 155 (437)
T ss_pred -cCCHH----HHHHHHhcchhHHHHHHH
Confidence 45643 344444455555554443
|
|
| >KOG4830|consensus | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.01 Score=58.10 Aligned_cols=65 Identities=9% Similarity=0.166 Sum_probs=43.2
Q ss_pred CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHH
Q psy15142 503 TTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVP 567 (744)
Q Consensus 503 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~ 567 (744)
+.+|..-|++-.++.+.+.+++.-...+.-..|++.|..+.+.++....+++-.+..+.....+.
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence 34566667777788888888887777777888888888776666655555544444444444333
|
|
| >KOG1479|consensus | Back alignment and domain information |
|---|
Probab=93.28 E-value=6.2 Score=42.43 Aligned_cols=106 Identities=13% Similarity=0.056 Sum_probs=67.9
Q ss_pred HHHHH-HHHHHHHhhhhhHHhhhccCCchhhHHHHHH-HHHHHHHHHH------HhhcChHHHHHHHHHHhhhhhhhhhH
Q psy15142 330 AVDSS-FFWGYLITQVPGGFFASRYPANRIFGTAIAC-TSFLHLFVPT------AIKLNPGSVIIVRICQGLVEGVCYPA 401 (744)
Q Consensus 330 ~~~~~-~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~l~G~~~~~~~~~ 401 (744)
.+..+ +++.-.+|.+.+.++-+. +||.....+++= ..+-.+.+ + ..-.+-+.+++...+.|+..|-....
T Consensus 286 ~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~-cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 286 LLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLL-CNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHH-hccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 34444 788888886666555443 344444433321 11111110 1 11335566778888999999988889
Q ss_pred HhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHH
Q psy15142 402 VHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPIS 437 (744)
Q Consensus 402 ~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~ 437 (744)
...+..+.+|++++-.+-.+.......|...|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999998887777777777777777766654
|
|
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.29 Score=56.73 Aligned_cols=105 Identities=12% Similarity=-0.085 Sum_probs=78.1
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCC--------hhHHHHHHHHHH
Q psy15142 130 GFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKS--------EVTATMALCLGV 201 (744)
Q Consensus 130 g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 201 (744)
..+...+.....+..+++|+++|++- ||++.++++.++..++.++.++... ....++...+..
T Consensus 26 ~~i~~~f~~l~yl~pilGg~iAD~~l---------G~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia 96 (654)
T TIGR00926 26 TVLFHTFTYLCYLTPLIGAIIADGWL---------GKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIA 96 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHH
Confidence 44445555566677889999999983 6777888888888888877776422 123455677888
Q ss_pred HhhhcccccccccccccCc-c---hhhHHHHHHhhhhhhhhHHHhh
Q psy15142 202 AFSGFAISGYNVNHLDIAP-R---YASILMGMSNGIGTIDIFISYI 243 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p-~---~rg~~~g~~~~~~~~g~~~~~~ 243 (744)
+|.|..-+...+...|..+ + +|-..+.++..+.|+|++++..
T Consensus 97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~ 142 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTI 142 (654)
T ss_pred hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889888888888888764 2 2667788888999999888755
|
|
| >KOG3097|consensus | Back alignment and domain information |
|---|
Probab=92.48 E-value=4.9 Score=41.59 Aligned_cols=72 Identities=4% Similarity=-0.003 Sum_probs=52.1
Q ss_pred HHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhcc
Q psy15142 336 FWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWA 410 (744)
Q Consensus 336 ~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~ 410 (744)
.+..+.++++.+.+..++|-|.++.++.......... -.-+.+..++....+.|++.+..+..--+|+++..
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~---Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA---NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh---hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 4555666677779999999999998877766544322 23345667888888999999888877777766554
|
|
| >KOG3574|consensus | Back alignment and domain information |
|---|
Probab=91.06 E-value=3.2 Score=43.84 Aligned_cols=62 Identities=6% Similarity=-0.061 Sum_probs=50.6
Q ss_pred HHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchh
Q psy15142 387 VRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEA 448 (744)
Q Consensus 387 ~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~ 448 (744)
...+.+......+....+..+.+.||..-|+.+.+.+...++|+..-..+..++.+.++|+.
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 34556666666777788999999999999999999999999998887777888888766654
|
|
| >KOG1479|consensus | Back alignment and domain information |
|---|
Probab=90.92 E-value=11 Score=40.61 Aligned_cols=29 Identities=14% Similarity=0.183 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhHHhHHhhhc
Q psy15142 381 PGSVIIVRICQGLVEGVCYPAVHGIWRFW 409 (744)
Q Consensus 381 ~~~~~~~~~l~G~~~~~~~~~~~~~~~e~ 409 (744)
+...++.-++.+++.+..+.......++.
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~ 145 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF 145 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC
Confidence 34455556677777777777777776665
|
|
| >PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) | Back alignment and domain information |
|---|
Probab=89.52 E-value=5.8 Score=39.79 Aligned_cols=100 Identities=6% Similarity=0.007 Sum_probs=54.6
Q ss_pred cchhHHHHHHHHHhhhHHHhhHHH--HH-Hhhh--ccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHHHH
Q psy15142 413 LERSRLATIAFCGTYAGIVLGLPI--SA-ILTE--HFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIE 487 (744)
Q Consensus 413 ~~Rg~~~g~~~~~~~~g~~ig~~i--~~-~l~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~ 487 (744)
++|+....+...+..+|.++.-.. .. -..+ .-.|++.+.+.+++.++-+++..++..+- +....+ |+.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f--d~~~~~-~k~---- 74 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF--DIYSPK-EKQ---- 74 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cccCcc-ccc----
Confidence 456666666667777777665332 22 0111 12499999988888877777776663321 111111 000
Q ss_pred HhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHH
Q psy15142 488 KSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCR 525 (744)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 525 (744)
.+.+.....+.+..+.+|++..|...+.+...
T Consensus 75 ------~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 75 ------EKENSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred ------ccccccccccchHHHHHccchHHHHHHHHHHH
Confidence 00001111235688999999988766555443
|
|
| >KOG3430|consensus | Back alignment and domain information |
|---|
Probab=89.11 E-value=0.86 Score=36.80 Aligned_cols=68 Identities=57% Similarity=1.167 Sum_probs=55.1
Q ss_pred CcccchhhHHHhHhhhHhhhhhhc-hhhHHHHHHHHhhhhcCCCcceehhhhhhcccccchh-hheeeec
Q psy15142 248 KSTMDADMQQKAIDATKEGLEKFN-IEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFET-HYIYFYL 315 (744)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 315 (744)
-..+++..+..+...+..+++.++ .++++...+++.+++++.+.|.++++-.|+++++... .++++++
T Consensus 10 ~tDM~~~mq~~a~~~a~~al~~f~~~~k~iA~~iKkefDkkyG~~WhcivG~~FGs~vThe~g~Fiyf~~ 79 (90)
T KOG3430|consen 10 ATDMPEEMQQEAIELARQALEKFNVIEKDIAAFIKKEFDKKYGPTWHCIVGRNFGSYVTHETGHFIYFYL 79 (90)
T ss_pred cCCCChHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhhhcCCccEEEEcCCcceEEEeecCcEEEEEe
Confidence 356778888888888888888877 5667788899999999999999999999999988877 4554443
|
|
| >KOG3810|consensus | Back alignment and domain information |
|---|
Probab=82.57 E-value=34 Score=36.04 Aligned_cols=132 Identities=10% Similarity=-0.051 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHhhhccCCchhhHH--HHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHh
Q psy15142 329 SAVDSSFFWGYLITQVPGGFFASRYPANRIFGT--AIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIW 406 (744)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 406 (744)
|..-++..+.++++.+..|++--++.|..-+++ +.+..+...++ ++.+.++|...++.++.........++...-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~--m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFI--MAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhh--hhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 444456667778888899999877766643333 33333333333 56677888877777777766666677777777
Q ss_pred hhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-----------chhHHHHHHHHHHHHHHHHH
Q psy15142 407 RFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-----------WEAMFYFYGCMGLLWYLCWL 465 (744)
Q Consensus 407 ~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-----------w~~~f~~~~~~~~~~~~~~~ 465 (744)
++....+.-|..+|+.....-+ +-.++.-...|.-| +...|.+.+++.++...+..
T Consensus 352 A~nL~~e~~gLvFGiNTFvAl~---lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVALI---LQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred HHhhhhhhheeeeehHHHHHHH---HHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 7777777778877776654333 22333323333211 33456666666665544433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 744 | ||||
| 1re6_A | 94 | Localisation Of Dynein Light Chains 1 And 2 And The | 6e-21 | ||
| 1pwj_A | 89 | Structure Of The Monomeric 8-Kda Dynein Light Chain | 6e-21 | ||
| 3p8m_A | 92 | Human Dynein Light Chain (Dynll2) In Complex With A | 6e-21 | ||
| 3brl_A | 89 | Crystal Structure Of Lc8 S88e SWA Length = 89 | 1e-20 | ||
| 2pg1_A | 91 | Structural Analysis Of A Cytoplasmic Dynein Light C | 1e-20 | ||
| 1rhw_A | 89 | The Solution Structure Of The Ph-Induced Monomer Of | 1e-20 | ||
| 3dvh_A | 91 | Lc8 Point Mutant K36p Length = 91 | 4e-20 | ||
| 3rjs_A | 89 | Crystal Structure Of Dynein Light Chain 8a (Dlc8) F | 1e-19 | ||
| 1pwk_A | 91 | Structure Of The Monomeric 8-Kda Dynein Light Chain | 2e-19 | ||
| 1f3c_A | 89 | Refined Solution Structure Of 8kda Dynein Light Cha | 4e-19 | ||
| 1cmi_A | 85 | Structure Of The Human PinLC8 DIMER WITH A BOUND PE | 4e-19 | ||
| 1yo3_A | 102 | 1.65 Angstrom Structure Of The Dynein Light Chain 1 | 2e-17 | ||
| 4ds1_A | 97 | The Structure Of A Yeast Dyn2-Nup159 Complex And Th | 2e-10 |
| >pdb|1RE6|A Chain A, Localisation Of Dynein Light Chains 1 And 2 And Their Pro- Apoptotic Ligands Length = 94 | Back alignment and structure |
|
| >pdb|1PWJ|A Chain A, Structure Of The Monomeric 8-Kda Dynein Light Chain And Mechanism Of Domain Swapped Dimer Assembly Length = 89 | Back alignment and structure |
|
| >pdb|3P8M|A Chain A, Human Dynein Light Chain (Dynll2) In Complex With An In Vitro Evolved Peptide Dimerized By Leucine Zipper Length = 92 | Back alignment and structure |
|
| >pdb|3BRL|A Chain A, Crystal Structure Of Lc8 S88e SWA Length = 89 | Back alignment and structure |
|
| >pdb|2PG1|A Chain A, Structural Analysis Of A Cytoplasmic Dynein Light Chain- Intermediate Chain Complex Length = 91 | Back alignment and structure |
|
| >pdb|1RHW|A Chain A, The Solution Structure Of The Ph-Induced Monomer Of Dynein Light Chain Lc8 From Drosophila Length = 89 | Back alignment and structure |
|
| >pdb|3DVH|A Chain A, Lc8 Point Mutant K36p Length = 91 | Back alignment and structure |
|
| >pdb|3RJS|A Chain A, Crystal Structure Of Dynein Light Chain 8a (Dlc8) From Toxoplasma Gondii At 1.5 A Resolution Length = 89 | Back alignment and structure |
|
| >pdb|1PWK|A Chain A, Structure Of The Monomeric 8-Kda Dynein Light Chain And Mechanism Of Domain Swapped Dimer Assembly Length = 91 | Back alignment and structure |
|
| >pdb|1F3C|A Chain A, Refined Solution Structure Of 8kda Dynein Light Chain (Dlc8) Length = 89 | Back alignment and structure |
|
| >pdb|1CMI|A Chain A, Structure Of The Human PinLC8 DIMER WITH A BOUND PEPTIDE Length = 85 | Back alignment and structure |
|
| >pdb|1YO3|A Chain A, 1.65 Angstrom Structure Of The Dynein Light Chain 1 From Plasmodium Falciparum Length = 102 | Back alignment and structure |
|
| >pdb|4DS1|A Chain A, The Structure Of A Yeast Dyn2-Nup159 Complex And The Molecular Basis For The Dynein Light Chain - Nuclear Pore Interaction Length = 97 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 9e-36
Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 5/320 (1%)
Query: 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLF--VPTA 376
++ S Y ++ G + R + + + LF
Sbjct: 55 VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW 114
Query: 377 IKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPI 436
+ + ++ G +G+ +P W ER + ++ C G + +
Sbjct: 115 ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLL 174
Query: 437 SAILTEHF-SWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQ 495
+ F W A Y +L L + + P E +
Sbjct: 175 FLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKA 234
Query: 496 VAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555
T + + ++ I +AN Y ++ + +YLK H + ++ +
Sbjct: 235 EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAY 294
Query: 556 SLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTA 615
L G ++D + + T V + ++ ++
Sbjct: 295 FLYEYAGIPGTLLCGWMSDKVFRGNR-GATGVFFMT-LVTIATIVYWMNPAGNPTVDMIC 352
Query: 616 TMALCLGIEGRWTVVFLIAA 635
+ + I G ++ L A
Sbjct: 353 MIVIGFLIYGPVMLIGLHAL 372
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 6/159 (3%)
Query: 313 FYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLF 372
YL +VKH + S + + + + G+ + + T + + + +
Sbjct: 277 TYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 334
Query: 373 VPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIA----FCGTYA 428
G+ + IC ++ + Y V I + T A G
Sbjct: 335 TIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG 394
Query: 429 GIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467
G V I + F W+ F +L + + +
Sbjct: 395 GSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 433
|
| >4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae} Length = 97 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 8e-27
Identities = 24/69 (34%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 251 MDADMQQKAIDATKEGLEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFET-H 309
+ +++ + +K+ L+K+ +ER++A +K+ + YG W +VG+NFGSYV+ E H
Sbjct: 21 ITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGH 80
Query: 310 YIYFYLGKV 318
++YFY+G +
Sbjct: 81 FVYFYIGPL 89
|
| >1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ... Length = 102 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 1e-24
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 251 MDADMQQKAIDATKEGLEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFET-H 309
M +MQ AID + L+K+N+E+++A +IK+ F+ Y P W CVVGRNFGSYV+ ET +
Sbjct: 26 MTEEMQIDAIDCANQALQKYNVEKDIAAHIKKEFDRKYDPTWHCVVGRNFGSYVTHETKN 85
Query: 310 YIYFYLGKV 318
+IYFY+G+V
Sbjct: 86 FIYFYIGQV 94
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 12/128 (9%), Positives = 32/128 (25%), Gaps = 4/128 (3%)
Query: 347 GFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIW 406
+R A S + ++ + V+I++
Sbjct: 280 PLIINRIGGKNALLLAGTIMSVR--IIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYI 337
Query: 407 RFWAPPLERSRL-ATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLC-W 464
+ + ++ ++ + E ++ + G + L + L
Sbjct: 338 TSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISV 397
Query: 465 LWLSFEKP 472
LS P
Sbjct: 398 FTLSGPGP 405
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 744 | |||
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 99.95 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 99.95 | |
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 99.93 | |
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 99.92 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 99.91 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 99.91 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 99.9 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 99.9 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 99.87 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.83 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.8 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 99.78 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 99.78 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 99.75 |
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=263.53 Aligned_cols=260 Identities=14% Similarity=0.125 Sum_probs=214.0
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHh----hcChHHHHHHHHHHhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAI----KLNPGSVIIVRICQGL 393 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~ 393 (744)
.+++ .+..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.++ .++ +++++.++++|++.|+
T Consensus 55 ~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~l~G~ 131 (451)
T 1pw4_A 55 VEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF--MGFVPWATSSIAVMFVLLFLCGW 131 (451)
T ss_dssp TSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH--HHHCHHHHSSSSHHHHHHHHHHH
T ss_pred HHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHH--HHhhhhccccHHHHHHHHHHHHH
Confidence 4667 89999999999999999999999999999999999999999999999988 567 8899999999999999
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
+.+...+...++++|++|+++|++++++.+.+..+|..++|.+++.+.+.+| ||+.|++.+++.++..++.+++.||+|
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 211 (451)
T 1pw4_A 132 FQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTP 211 (451)
T ss_dssp HHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSS
T ss_pred HhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCH
Confidence 9999999999999999999999999999999999999999999999888888 999999999988887777767778877
Q ss_pred CCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHH
Q psy15142 473 CLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETG 552 (744)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 552 (744)
++....+.++.+............+........+++++++|.++...+..++.....+.+..++|.|+++.+|+++.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 291 (451)
T 1pw4_A 212 QSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSS 291 (451)
T ss_dssp TTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHH
T ss_pred hhcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 65332211110000000000000000001111246778899999999999999999999999999999987899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHh--hhcC
Q psy15142 553 FIGSLPHLLMTIVVPCGGMLADHL--RKKG 580 (744)
Q Consensus 553 ~~~~~~~~~~~i~~~~~g~l~dr~--g~r~ 580 (744)
++.++..++.+++.++.|++.||+ ++|+
T Consensus 292 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 321 (451)
T 1pw4_A 292 WAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 321 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 999999999999999999999999 7763
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-26 Score=249.95 Aligned_cols=269 Identities=12% Similarity=0.042 Sum_probs=217.9
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHH-HhhcChHHHHHHHHHHhhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPT-AIKLNPGSVIIVRICQGLVE 395 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~~~ 395 (744)
..+++|++..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.++... ..+++++.+++.|++.|++.
T Consensus 52 ~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 131 (438)
T 3o7q_A 52 FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGL 131 (438)
T ss_dssp HHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhH
Confidence 35789999999999999999999999999999999999999999999999999887211 67789999999999999999
Q ss_pred hhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhh-hccC-------------------------chhH
Q psy15142 396 GVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILT-EHFS-------------------------WEAM 449 (744)
Q Consensus 396 ~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~-~~~g-------------------------w~~~ 449 (744)
+...+...++++|++|+++|++++++.+.+..+|..++|.+++.+. +..+ ||+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 211 (438)
T 3o7q_A 132 GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTP 211 (438)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999999999988 5554 8999
Q ss_pred HHHHHHHHHHHHHHHHhh-cccCCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHH
Q psy15142 450 FYFYGCMGLLWYLCWLWL-SFEKPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWN 528 (744)
Q Consensus 450 f~~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 528 (744)
|++.+++.++..++.++. .||++++.+.. ++......++++++++|.++...+..++....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T 3o7q_A 212 YMIIVAIVLLVALLIMLTKFPALQSDNHSD------------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGA 273 (438)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCCTTTCCCC------------------SSTTSHHHHHHHHTTCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccccccc------------------ccccchhhhHHHHHhChHHHHHHHHHHHHHHH
Confidence 988877766665554433 23332211000 00111123577889999999988888888888
Q ss_pred HHHHHHHHHHH-HHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHh
Q psy15142 529 FYLLVLFQASY-LKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVA 607 (744)
Q Consensus 529 ~~~~~~~~p~~-l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 607 (744)
...+..++|.| +++.+|+++.+++.+.++..++.+++.++.|+++||+++|+ ....+.++..+++++..
T Consensus 274 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~----------~~~~~~~~~~~~~~~~~ 343 (438)
T 3o7q_A 274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK----------VLAAYALIAMALCLISA 343 (438)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH----------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH----------HHHHHHHHHHHHHHHHH
Confidence 88999999999 88877999999999999999999999999999999999874 33333444444454455
Q ss_pred ccCchH
Q psy15142 608 YTKSEV 613 (744)
Q Consensus 608 ~~~~~~ 613 (744)
+.++.+
T Consensus 344 ~~~~~~ 349 (438)
T 3o7q_A 344 FAGGHV 349 (438)
T ss_dssp HCCHHH
T ss_pred HcCCcH
Confidence 444443
|
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=247.21 Aligned_cols=343 Identities=12% Similarity=-0.039 Sum_probs=228.3
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHh------------------cCCh
Q psy15142 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY------------------TKSE 190 (744)
Q Consensus 129 ~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~------------------~~~~ 190 (744)
.|++.+++++|..+|++++|+++||+ |||+.++++++++.++.+++++ ++|.
T Consensus 57 ~g~~~s~~~~G~~iG~~~~G~laDr~----------GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~ 126 (491)
T 4gc0_A 57 LGFCVASALIGCIIGGALGGYCSNRF----------GRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYV 126 (491)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHT----------CHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh----------cCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhH
Confidence 38999999999999999999999999 8999999999999999999884 7789
Q ss_pred hHHHHHHHHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCc--------------------
Q psy15142 191 VTATMALCLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKS-------------------- 249 (744)
Q Consensus 191 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~-------------------- 249 (744)
++++++|++.|++.|...+...++++|++|+ +||+..++.+.+..+|.++++.+.....
T Consensus 127 ~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (491)
T 4gc0_A 127 PEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASE 206 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhh
Confidence 9999999999999999999999999999985 6999999999998888777655432211
Q ss_pred ---------------ccchhhHHHh-HhhhHhhhhhhchhhHH-------HHHHHHh------hhhcCCCcceehhhhhh
Q psy15142 250 ---------------TMDADMQQKA-IDATKEGLEKFNIEREV-------ATYIKQY------FENAYGPYWQCVVGRNF 300 (744)
Q Consensus 250 ---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~~~~~~~~~~ 300 (744)
+.+.+..... .++..+.+++...+... .....+. ......++........+
T Consensus 207 ~~~~~~~~~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
T 4gc0_A 207 CIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSI 286 (491)
T ss_dssp HHHHHHHHHHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHH
T ss_pred hhhhhhhhhhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHH
Confidence 1111110000 00011111111000000 0000000 00111111222222222
Q ss_pred cccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhc-
Q psy15142 301 GSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKL- 379 (744)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~- 379 (744)
...........++.....+..+.+.........+..+...++.++++++.||+|||+.++.+...++++.+.+......
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~ 366 (491)
T 4gc0_A 287 FQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ 366 (491)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhhHHHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcc
Confidence 2222222222222222234556666666667777788888999999999999999999999888877776653222221
Q ss_pred -ChHHHHHH-HHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhh------ccCchhHHH
Q psy15142 380 -NPGSVIIV-RICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTE------HFSWEAMFY 451 (744)
Q Consensus 380 -~~~~~~~~-~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~------~~gw~~~f~ 451 (744)
+....++. .++.+....+..++.+.+.+|.+|++.|++++|+....+++|+.+++.+.+.+.+ ..++...|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~ 446 (491)
T 4gc0_A 367 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYW 446 (491)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 22222222 2222222334557788999999999999999999999999999999988776643 346777888
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCChHHHHH
Q psy15142 452 FYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLY 485 (744)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~ 485 (744)
+.++++++..++.+++.|||. .++.||.++
T Consensus 447 i~~~~~~~~~i~~~~~~PETk----g~tLeei~~ 476 (491)
T 4gc0_A 447 IYGCMGVLAALFMWKFVPETK----GKTLEELEA 476 (491)
T ss_dssp HHHHHHHHHHHHHHHHCCCCT----TCCHHHHGG
T ss_pred HHHHHHHHHHHHHHheecCCC----CCCHHHHHH
Confidence 888888888888888889874 345666543
|
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=237.22 Aligned_cols=253 Identities=13% Similarity=0.101 Sum_probs=185.2
Q ss_pred CchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH------------------hhcChHHHH
Q psy15142 324 TVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA------------------IKLNPGSVI 385 (744)
Q Consensus 324 s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~ 385 (744)
+....|++.+++.+|.++|++++|+++||+|||++++++.+++.++.++ .+ .++++++++
T Consensus 53 ~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~--~a~~~~~~~~~~~~~~~~~~~a~~~~~l~ 130 (491)
T 4gc0_A 53 ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVG--SAWPELGFTSINPDNTVPVYLAGYVPEFV 130 (491)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--HHCTTTTTSCSSSSSSCCGGGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH--HHHHhhhhhhhcchhHHHHHHhhhHHHHH
Confidence 4456789999999999999999999999999999999999999999887 44 477899999
Q ss_pred HHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc--------cCchhHHHHHHHHH
Q psy15142 386 IVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH--------FSWEAMFYFYGCMG 457 (744)
Q Consensus 386 ~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~--------~gw~~~f~~~~~~~ 457 (744)
++|+++|++.|+..+...++++|+.|+++|++..++.+.+..+|..+++.++..+... .+|+..+.+..+..
T Consensus 131 ~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (491)
T 4gc0_A 131 IYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPA 210 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhh
Confidence 9999999999999999999999999999999999999999999999999888776543 34677776666666
Q ss_pred HHHHHHHHhhcccCCCCCCCCC-hHHH-HHHHHhhcccccc---------cCCCCCCCcHHHHhhcHHH-HHHHHHHHHH
Q psy15142 458 LLWYLCWLWLSFEKPCLHPTIS-GREL-LYIEKSLGSSVQV---------AMPTLATTPWREFAHSMPV-YAIIVANFCR 525 (744)
Q Consensus 458 ~~~~~~~~~~~~e~p~~~~~~~-~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~ 525 (744)
++..+.. ++.||+|++..... .++. +.+++...+.... .....+.......++.+.. .......+.+
T Consensus 211 ~~~~~~~-~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (491)
T 4gc0_A 211 LLFLMLL-YTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQ 289 (491)
T ss_dssp HHHHHHG-GGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHH
T ss_pred hhhhhhh-hcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHH
Confidence 5554444 45699987632221 1221 1111111000000 0000001112223333333 3445555566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 526 SWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 526 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+.+.+..|.|.+.+. .+.+.........+..+...++.++++++.||+|||+
T Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~ 343 (491)
T 4gc0_A 290 FVGINVVLYYAPEVFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP 343 (491)
T ss_dssp HTCHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHH
T ss_pred HhhhhHHHhcchHHHHh-cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 66777778888887776 6777777777788888999999999999999999985
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-23 Score=231.17 Aligned_cols=260 Identities=13% Similarity=0.051 Sum_probs=191.6
Q ss_pred ccccCchhhHHHHHHHHHHHHHhhhhhHHhhhc-cCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhh
Q psy15142 320 HINWTVAQESAVDSSFFWGYLITQVPGGFFASR-YPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVC 398 (744)
Q Consensus 320 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 398 (744)
++|++..+.+++.+++.++..++++++|+++|| +|||+++..+.++.+++.++ .+++++.+.++++|++.|++.+..
T Consensus 48 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~~~ 125 (491)
T 4aps_A 48 DLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIV--LALPFGASALFGSIILIIIGTGFL 125 (491)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH--HHSCCSTTHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHhc
Confidence 389999999999999999999999999999999 89999999999999999888 678889999999999999999999
Q ss_pred hhHHhHHhhhccCccc--hhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCC-
Q psy15142 399 YPAVHGIWRFWAPPLE--RSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH- 475 (744)
Q Consensus 399 ~~~~~~~~~e~~p~~~--Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~- 475 (744)
.+...++++|++|+++ |+.++++++.+..+|..++|.+++.+.+..||++.|++.++..++..++.++..++..++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (491)
T 4aps_A 126 KPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHY 205 (491)
T ss_dssp HHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred cchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccc
Confidence 9999999999999988 7788888999999999999999999999999999999988777766665554434322111
Q ss_pred ----CCCChHHHHHHHHh----------------hcccccccC--------------------CCCCCCcHHHHhhcHHH
Q psy15142 476 ----PTISGRELLYIEKS----------------LGSSVQVAM--------------------PTLATTPWREFAHSMPV 515 (744)
Q Consensus 476 ----~~~~~~~~~~~~~~----------------~~~~~~~~~--------------------~~~~~~~~~~l~~~~~~ 515 (744)
...+.++.+...+. ..+...... .+.......+..+....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
T 4aps_A 206 LRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSY 285 (491)
T ss_dssp SCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTTH
T ss_pred cCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Confidence 11122222221111 000000000 00000000111122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCc
Q psy15142 516 YAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGI 581 (744)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~ 581 (744)
+.+.+..+.....+.....++|.|+++..+.+....+.+..+..++.+++.++.+++.||++||+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~ 351 (491)
T 4aps_A 286 IPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQP 351 (491)
T ss_dssp HHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCC
Confidence 444545555566666677788889988777776778888888899999999999999999999853
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=238.76 Aligned_cols=328 Identities=13% Similarity=0.000 Sum_probs=237.4
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHh----cCChhHHHHHHHHHHHh
Q psy15142 128 RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAY----TKSEVTATMALCLGVAF 203 (744)
Q Consensus 128 ~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 203 (744)
+.|++.+++.++..++++++|+++||+ |||++++++.++.+++.+++++ +++++.++++|++.|++
T Consensus 63 ~~g~~~~~~~~~~~~~~~~~G~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 132 (451)
T 1pw4_A 63 DLGFALSGISIAYGFSKFIMGSVSDRS----------NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF 132 (451)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHS----------CHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhc----------CchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHH
Confidence 349999999999999999999999999 7888999999999999999999 99999999999999999
Q ss_pred hhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccch-hh---HHHh-Hhh-----hHhhh-hhhc
Q psy15142 204 SGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMDA-DM---QQKA-IDA-----TKEGL-EKFN 271 (744)
Q Consensus 204 ~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~---~~~~-~~~-----~~~~~-~~~~ 271 (744)
.+...+...+++.|+.| ++|++++|+.+.+.++|.++++.+......... +. .... ... ..... +...
T Consensus 133 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 212 (451)
T 1pw4_A 133 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQ 212 (451)
T ss_dssp HHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSST
T ss_pred hhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCHh
Confidence 99999999999999998 579999999999999998888665422111000 10 0000 000 00000 0000
Q ss_pred h-------h--h--------HH--HHHHHHh-hhhcCC-CcceehhhhhhcccccchhhheeeecccccccccCchhhHH
Q psy15142 272 I-------E--R--------EV--ATYIKQY-FENAYG-PYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESA 330 (744)
Q Consensus 272 ~-------~--~--------~~--~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 330 (744)
. + + +. ....++. .....+ +.........+...........+...+..+.+|++..+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 292 (451)
T 1pw4_A 213 SCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW 292 (451)
T ss_dssp TTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHH
T ss_pred hcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 0 0 0 00 0000000 001111 11111111112222222222222223334558999999999
Q ss_pred HHHHHHHHHHHhhhhhHHhhhcc--CCchhhHHHHHHHH-HHHHHHHHHhh--cChHHHHHHHHHHhhhhhhhhhHHhHH
Q psy15142 331 VDSSFFWGYLITQVPGGFFASRY--PANRIFGTAIACTS-FLHLFVPTAIK--LNPGSVIIVRICQGLVEGVCYPAVHGI 405 (744)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~l~Dr~--Grr~~l~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~ 405 (744)
+.++..++..++.++.|+++||+ |||+.+..+.++.. ++.++ .... .+.+.+.+..++.|++.+...+...++
T Consensus 293 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 370 (451)
T 1pw4_A 293 AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV--YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLH 370 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHH--TTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH--HHHhcccCHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 99999999999999999999999 99999888877766 55544 3333 366677778888999888888889999
Q ss_pred hhhccCccchhHHHHHHHHHhhh-HHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhh
Q psy15142 406 WRFWAPPLERSRLATIAFCGTYA-GIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467 (744)
Q Consensus 406 ~~e~~p~~~Rg~~~g~~~~~~~~-g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 467 (744)
+.|.+|++.|+++.|+.+....+ |..++|.+.|.+.+..||+..|++.+++.++..++.++.
T Consensus 371 ~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 433 (451)
T 1pw4_A 371 ALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 433 (451)
T ss_dssp HHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999999999888887776666554
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-24 Score=230.38 Aligned_cols=239 Identities=11% Similarity=0.062 Sum_probs=210.2
Q ss_pred ccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhh
Q psy15142 318 VKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGV 397 (744)
Q Consensus 318 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 397 (744)
.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++ ...+++++.+++.|++.|++.+.
T Consensus 27 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~g~~~~~ 104 (375)
T 2gfp_A 27 ARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLV--AVTTSSLTVLIAASAMQGMGTGV 104 (375)
T ss_dssp HTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHHh
Confidence 5778999999999999999999999999999999999999999999999999888 56778999999999999999999
Q ss_pred hhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy15142 398 CYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPT 477 (744)
Q Consensus 398 ~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~~~ 477 (744)
..+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..||++.|++.+++.++..++..+..||++++.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
T 2gfp_A 105 GGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAP 184 (375)
T ss_dssp HHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTTCC
T ss_pred hhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCCCCcc
Confidence 99999999999999999999999999999999999999999999988999999998888777766455555766543211
Q ss_pred CChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q psy15142 478 ISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSL 557 (744)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 557 (744)
. +....++++++++|.++...+..++.......+..+.|.|+++.+|+++.+.+.+.+.
T Consensus 185 ~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 243 (375)
T 2gfp_A 185 R---------------------TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFIL 243 (375)
T ss_dssp C---------------------CCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHT
T ss_pred c---------------------ccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 0 0123346678899999988888888888999999999999988789999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhc
Q psy15142 558 PHLLMTIVVPCGGMLADHLRKK 579 (744)
Q Consensus 558 ~~~~~~i~~~~~g~l~dr~g~r 579 (744)
..++.+++.++.+++.||.+++
T Consensus 244 ~~~~~~~~~~~~~~l~~r~~~~ 265 (375)
T 2gfp_A 244 PIPAAFFGAWFAGRPNKRFSTL 265 (375)
T ss_dssp HHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999863
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=229.67 Aligned_cols=321 Identities=11% Similarity=0.026 Sum_probs=232.6
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHH---HhcCChhHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVV---AYTKSEVTATMALC 198 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 198 (744)
++.+.. .|++.+++.++..++.+++|+++||+ |||+.+++++++.+++.+++ +++++++.+++.|+
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~----------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (438)
T 3o7q_A 56 FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL----------SYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_dssp SCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHS----------CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh----------cchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 444443 49999999999999999999999999 78889999999999999999 88899999999999
Q ss_pred HHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCCc-ccchh-----------------h----
Q psy15142 199 LGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGKS-TMDAD-----------------M---- 255 (744)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~~-----------------~---- 255 (744)
+.|++.|...+...++++|+.|+ +|++.+|+.+.+.++|.++++.+..... ..... .
T Consensus 126 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (438)
T 3o7q_A 126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLV 205 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhh
Confidence 99999999999999999999985 6999999999999999999987544332 21110 0
Q ss_pred --HHHhHhh------hH---hhh----hhhc------hhhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeee
Q psy15142 256 --QQKAIDA------TK---EGL----EKFN------IEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFY 314 (744)
Q Consensus 256 --~~~~~~~------~~---~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (744)
++..... .. -.. +... .+.......++.+++ +..+...+.. +...........+..
T Consensus 206 ~~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~ 282 (438)
T 3o7q_A 206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARI--RHWRWAVLAQ-FCYVGAQTACWSYLI 282 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTCCCCSSTTSHHHHHHHHTTC--SHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccchhhhHHHHHhC--hHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 1111100 00 000 0000 001112223333321 1122222222 222222222222222
Q ss_pred cc-cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhh
Q psy15142 315 LG-KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGL 393 (744)
Q Consensus 315 ~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 393 (744)
.+ ..+.+|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.++ ....++.+.+ +..++.|+
T Consensus 283 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~g~ 359 (438)
T 3o7q_A 283 RYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLI--SAFAGGHVGL-IALTLCSA 359 (438)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH--HHHCCHHHHH-HHHHHHHH
T ss_pred HHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH--HHHcCCcHHH-HHHHHHHH
Confidence 23 34566999999999999999999999999999999999999999998888887766 4455555443 34478889
Q ss_pred hhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhccC-chhHHHHHHHHHHHHH
Q psy15142 394 VEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEHFS-WEAMFYFYGCMGLLWY 461 (744)
Q Consensus 394 ~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~g-w~~~f~~~~~~~~~~~ 461 (744)
+.+..++...++..|.+|++ |+.+.++.. ...+|..++|.+.|.+.+..| ++..|++.+++.++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 426 (438)
T 3o7q_A 360 FMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_dssp HHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 99999999999999999966 888888877 667999999999999999998 9999887665544443
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-22 Score=225.80 Aligned_cols=336 Identities=12% Similarity=0.021 Sum_probs=224.9
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHH-HHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADH-LRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLG 200 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr-~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (744)
++.+.. .|++.+++.++..++++++|+++|| + |||+++++++++.+++.++++++++.+.+++.|++.
T Consensus 49 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (491)
T 4aps_A 49 LHITRATAASIMAIYASMVYLSGTIGGFVADRII----------GARPAVFWGGVLIMLGHIVLALPFGASALFGSIILI 118 (491)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----------CHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 455543 4999999999999999999999999 8 788899999999999999999999999999999999
Q ss_pred HHhhhcccccccccccccCc-ch--hhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh---h----------hH
Q psy15142 201 VAFSGFAISGYNVNHLDIAP-RY--ASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID---A----------TK 264 (744)
Q Consensus 201 ~~~~g~~~~~~~~~~~e~~p-~~--rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~----------~~ 264 (744)
|++.|...+...++++|+.| ++ |++.+++++.+.++|.++++.+.....+...+....... . ..
T Consensus 119 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 198 (491)
T 4aps_A 119 IIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGK 198 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999997 45 788899899999999888876543322211111100000 0 00
Q ss_pred hhhhh----hc---hhhHHHHHHHH--------------------------------------------hhh-----hcC
Q psy15142 265 EGLEK----FN---IEREVATYIKQ--------------------------------------------YFE-----NAY 288 (744)
Q Consensus 265 ~~~~~----~~---~~~~~~~~~~~--------------------------------------------~~~-----~~~ 288 (744)
+...+ .. ..++..+..+. .++ ...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
T 4aps_A 199 KTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTE 278 (491)
T ss_dssp TTCCSCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred ccccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHH
Confidence 00000 00 00000010000 000 011
Q ss_pred CCcceeh---hhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhH-----
Q psy15142 289 GPYWQCV---VGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFG----- 360 (744)
Q Consensus 289 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~----- 360 (744)
+++.... ....+..+..+.........+..+.++.+....+++.+...++..++.++.|+++||+|||+...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~ 358 (491)
T 4aps_A 279 HLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFA 358 (491)
T ss_dssp ---CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHH
Confidence 1111111 11111111111111111111223445555566778888888888999999999999999987655
Q ss_pred HHHHHHHHHHHHHHHHhh---------cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHH
Q psy15142 361 TAIACTSFLHLFVPTAIK---------LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIV 431 (744)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ 431 (744)
.+.++.+++.+++ ... .+.+.+++..++.|++.+...+...+++.|.+|++.|+++.|+.+....+|..
T Consensus 359 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 436 (491)
T 4aps_A 359 VGLMFAGLSFLLM--AIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSA 436 (491)
T ss_dssp HHHHHHHHHHTTT--HHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 6666666665542 222 26667777888899999998999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 432 LGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 432 ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
+++.+.+.+.+. ++...|.+.++++++..++.+++.++.
T Consensus 437 i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (491)
T 4aps_A 437 LNAQLVTLYNAK-SEVAYFSYFGLGSVVLGIVLVFLSKRI 475 (491)
T ss_dssp HHHHHGGGGGGS-STTHHHHHTHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887654 677788888888777766666554443
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=204.23 Aligned_cols=250 Identities=11% Similarity=0.067 Sum_probs=161.3
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHH-HHhhcCh-HHHHHHHHHHhhh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVP-TAIKLNP-GSVIIVRICQGLV 394 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~G~~ 394 (744)
..+++|+++.+.|++.+++.++..++++++|+++||+|||++++++.++.+++..... ....... ..++..+++.|++
T Consensus 34 l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (417)
T 2cfq_A 34 LHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIY 113 (417)
T ss_dssp HHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSS
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566899999999999999999999999999999999999999988876654321100 1111111 0123344555554
Q ss_pred hhhhhhHHhHHhhhccCc--cchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 395 EGVCYPAVHGIWRFWAPP--LERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 395 ~~~~~~~~~~~~~e~~p~--~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
.+..++.....+.++.++ +.|+...|.......+|..++|.+++.+.+ .+|+..|++.+++.++..++.++..||++
T Consensus 114 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 192 (417)
T 2cfq_A 114 LGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAP 192 (417)
T ss_dssp TTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCCCS
T ss_pred HHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 444443333334444332 456777788888889999999999999887 58999998877765544444433333332
Q ss_pred CCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---Chh
Q psy15142 473 CLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHL---QIQ 549 (744)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~---s~~ 549 (744)
+..+ .++. . +.+..+.....+++++++|.++...+..+.....+..+..++|.|+.+.++. +..
T Consensus 193 ~~~~---~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (417)
T 2cfq_A 193 SSAT---VANA---------V-GANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTR 259 (417)
T ss_dssp CSSC---SSSS---------S-SSCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTH
T ss_pred cccc---cccc---------c-ccccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChh
Confidence 2110 0000 0 0000011112356788899988776665555556666666788888764432 234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 550 ETGFIGSLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 550 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
..+++.++..++.+++.++.++++||+++|+
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 290 (417)
T 2cfq_A 260 VFGYVTTMGELLNASIMFFAPLIINRIGGKN 290 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcHHH
Confidence 4567777777888899999999999999884
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-21 Score=209.75 Aligned_cols=336 Identities=10% Similarity=-0.021 Sum_probs=200.0
Q ss_pred hhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHH---HHHHhcCCh-hHHHHH
Q psy15142 122 KLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFF---VVVAYTKSE-VTATMA 196 (744)
Q Consensus 122 ~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~ 196 (744)
.+|.+. +.|++.++..+++.++++++|+++||+ |||+++++++.+.+++. ....+++.. ...+..
T Consensus 37 ~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~----------Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T 2cfq_A 37 INHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----------GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVG 106 (417)
T ss_dssp TTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTS----------TTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345655 449999999999999999999999999 66667766665544321 111222111 112334
Q ss_pred HHHHHHhhhcccccccccccccCc---chhhHHHHHHhhhhhhhhHHHhhhccCCcccc-hhhHHHhH--h--h-hH-hh
Q psy15142 197 LCLGVAFSGFAISGYNVNHLDIAP---RYASILMGMSNGIGTIDIFISYIGRRGKSTMD-ADMQQKAI--D--A-TK-EG 266 (744)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~e~~p---~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~--~--~-~~-~~ 266 (744)
+.+.+.+.|...+.....+.++.+ +++|...|..+..+++|..+++.+........ ........ . . .. ..
T Consensus 107 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~~~~~~~f~~~~~~~~~~~~~~~~ 186 (417)
T 2cfq_A 107 SIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFF 186 (417)
T ss_dssp HHGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHHHCSHHHHTTTTTTTTTHHHHSCS
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Confidence 555555555544444444444443 34677788888888888777765332111100 00000000 0 0 00 00
Q ss_pred -hhhh------------chhhHHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeeccccccc---ccCchhhHH
Q psy15142 267 -LEKF------------NIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHI---NWTVAQESA 330 (744)
Q Consensus 267 -~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~ 330 (744)
.++. ..++......++.++++ +.+...+. .+.....+.........+..+.+ +.+....++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 263 (417)
T 2cfq_A 187 AKTDAPSSATVANAVGANHSAFSLKLALELFRQP--KLWFLSLY-VIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGY 263 (417)
T ss_dssp SCCCCSCSSCSSSSSSSCCCCCCHHHHHHHTTCH--HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHH
T ss_pred cCcccccccccccccccccccccHHHHHHHhcCC--chhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHH
Confidence 0000 00000001111222111 11211111 11111111100000000111112 223445677
Q ss_pred HHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhcc
Q psy15142 331 VDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWA 410 (744)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~ 410 (744)
+.++..++..++.++.|+++||+|||+++..+.++.+++.++ .++.++.+.+++..++.+++.+...+....+++|.+
T Consensus 264 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 341 (417)
T 2cfq_A 264 VTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIG--SSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQF 341 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HTTCCSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH--HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 777888888899999999999999999998888887777655 455667777777777788877777777889999999
Q ss_pred CccchhHHHHHH-HHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15142 411 PPLERSRLATIA-FCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKP 472 (744)
Q Consensus 411 p~~~Rg~~~g~~-~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e~p 472 (744)
|++.||++.++. +....+|+.++|.++|.+.+..|+...|.+.+++.++..++.+++.||++
T Consensus 342 p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~ 404 (417)
T 2cfq_A 342 EVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPG 404 (417)
T ss_dssp CHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCCSC
T ss_pred CHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 999999999994 78888999999999999999888888998888888777766666555543
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.6e-19 Score=198.88 Aligned_cols=147 Identities=16% Similarity=0.073 Sum_probs=132.1
Q ss_pred ccccc------cCchhhHHHHHHHHHHHHHhhhhhHHhhhcc-CCchhhHHHHHHHHHHHHHHHHHhhc-ChHHHHHHHH
Q psy15142 318 VKHIN------WTVAQESAVDSSFFWGYLITQVPGGFFASRY-PANRIFGTAIACTSFLHLFVPTAIKL-NPGSVIIVRI 389 (744)
Q Consensus 318 ~~~~g------~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 389 (744)
.+++| ++..+.+++.+++.++..++++++|+++||+ |||+++.++.++.+++.++ .++++ +.+.+++.|+
T Consensus 40 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 117 (524)
T 2xut_A 40 MTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAF--LAIFEHSVQGFYTGLF 117 (524)
T ss_dssp HHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHH--HHHTSSCHHHHHHHHH
T ss_pred HHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH--HHHhcccHHHHHHHHH
Confidence 45677 9999999999999999999999999999999 9999999999999998887 56777 8999999999
Q ss_pred HHhhhhhhhhhHHhHHhhhccCccchhHHHHH---HHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHh
Q psy15142 390 CQGLVEGVCYPAVHGIWRFWAPPLERSRLATI---AFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLW 466 (744)
Q Consensus 390 l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~---~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 466 (744)
+.|++.+...+...++++|++|+++|+++.+. .+.+..+|..++|.+++.+.+..||++.|++.+++.++..++.++
T Consensus 118 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 197 (524)
T 2xut_A 118 LIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWL 197 (524)
T ss_dssp HHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876666 889999999999999999998899999999988887666555443
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-21 Score=207.96 Aligned_cols=315 Identities=10% Similarity=-0.081 Sum_probs=215.9
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMALCLGV 201 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (744)
++.+.. .|++.++..++..++++++|+++||+ |||+.++++.++.+++.++.+++++.+.+++.|++.|
T Consensus 30 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 99 (375)
T 2gfp_A 30 LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRV----------GRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQG 99 (375)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTS----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 344443 49999999999999999999999999 6777888999999999999999999999999999999
Q ss_pred HhhhcccccccccccccCc-chhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHhhh---Hh-h-----hhhhc
Q psy15142 202 AFSGFAISGYNVNHLDIAP-RYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDAT---KE-G-----LEKFN 271 (744)
Q Consensus 202 ~~~g~~~~~~~~~~~e~~p-~~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-----~~~~~ 271 (744)
++.+...+...+++.|..| ++|++.+|+.+....+|.++++.+.....+...+......... .. . .++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (375)
T 2gfp_A 100 MGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETR 179 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCS
T ss_pred HHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccC
Confidence 9999999999999999997 5799999999999999999998765444332121111100000 00 0 00000
Q ss_pred h-hh---HHHHHHHHhhhhcCCCcceehhhhhhcccccchhhheeeecccccccccCchhhHHHHHHHHHHHHHhhhhhH
Q psy15142 272 I-ER---EVATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGG 347 (744)
Q Consensus 272 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 347 (744)
. ++ +..+..++.++++ +.+...+..+ ...........+...+..+.+|.++.+.+++.+...++..++.++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 256 (375)
T 2gfp_A 180 PVDAPRTRLLTSYKTLFGNS--GFNCYLLMLI-GGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAG 256 (375)
T ss_dssp TTTCCCCCTTTCSTHHHHHH--HHHHHHHHHH-HHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHhcCc--chHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0000011111111 1111111111 11111112222222333455788888999999999999999999999
Q ss_pred HhhhccCCchhhHHHHHH-HHHHHHHHHHHh--hcChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccchhHHHHHHHH
Q psy15142 348 FFASRYPANRIFGTAIAC-TSFLHLFVPTAI--KLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERSRLATIAFC 424 (744)
Q Consensus 348 ~l~Dr~Grr~~l~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~Rg~~~g~~~~ 424 (744)
++.||+|++ +..+..+ ..++..+..... .++.+.+++..++.|++.+...+...+++.|.+| ++|+++.|+.+.
T Consensus 257 ~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~ 333 (375)
T 2gfp_A 257 RPNKRFSTL--MWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGG 333 (375)
T ss_dssp TTTTHHHHH--HHHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cccchHHHHHHH
Confidence 999999882 2233322 222221100111 2355666677888999999999999999999998 899999999999
Q ss_pred HhhhHHHhhHHHHHHhhhccCchhHHHHH
Q psy15142 425 GTYAGIVLGLPISAILTEHFSWEAMFYFY 453 (744)
Q Consensus 425 ~~~~g~~ig~~i~~~l~~~~gw~~~f~~~ 453 (744)
...+|..++|.+.+.+.+..++...+.+.
T Consensus 334 ~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 362 (375)
T 2gfp_A 334 LQNIGSGVLASLSAMLPQTGQGSLGLLMT 362 (375)
T ss_dssp HHHHHHHCCSTTCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 99999999999999998877777666653
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.9e-19 Score=198.22 Aligned_cols=336 Identities=10% Similarity=-0.094 Sum_probs=200.0
Q ss_pred cccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcC-ChhHHHHHHHHHHH
Q psy15142 125 FEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK-SEVTATMALCLGVA 202 (744)
Q Consensus 125 ~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 202 (744)
.+.. .|++.+++.++..++.+++|+++||+ .|||++++++.++.+++.+++++++ +.+.+++.|++.|+
T Consensus 51 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~---------~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 121 (524)
T 2xut_A 51 LRGAVAKDVFHSFVIGVYFFPLLGGWIADRF---------FGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIAL 121 (524)
T ss_dssp TTTTTHHHHHHHHHHHHHHTHHHHHHHHTTS---------SCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 5554 49999999999999999999999998 0456678888899999999999998 99999999999999
Q ss_pred hhhcccccccccccccCcc-hhhHHHHH---HhhhhhhhhHHHhhhccCCcccchhhHHHhHh---h----hHhhh--hh
Q psy15142 203 FSGFAISGYNVNHLDIAPR-YASILMGM---SNGIGTIDIFISYIGRRGKSTMDADMQQKAID---A----TKEGL--EK 269 (744)
Q Consensus 203 ~~g~~~~~~~~~~~e~~p~-~rg~~~g~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~--~~ 269 (744)
+.|...+...+++.|..|+ +||+..++ ++.+.++|.++++.+.........+....... . ..... ..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 201 (524)
T 2xut_A 122 GSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKR 201 (524)
T ss_dssp HHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred hccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999985 58776655 88888998888876543322211111100000 0 00000 00
Q ss_pred h---chhhHH-HH---H----HH--------------------------------------------------Hh---hh
Q psy15142 270 F---NIEREV-AT---Y----IK--------------------------------------------------QY---FE 285 (744)
Q Consensus 270 ~---~~~~~~-~~---~----~~--------------------------------------------------~~---~~ 285 (744)
. ..+.+. .+ . .+ .. .+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (524)
T 2xut_A 202 YIHMPPEPKDPHGFLPVIRSALLTKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLE 281 (524)
T ss_dssp CCCCC--------------------CTTHHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHH
T ss_pred ccccCCCCccchhHHHHHHHHHhhhhcccCccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccchhhHHh
Confidence 0 000000 00 0 00 00 00
Q ss_pred ----------hcCCCcceehhhhhhcccccc--hhhheeeecccccccccCc-hhhHHHHHHHHHHHHHhhhhhHHhh--
Q psy15142 286 ----------NAYGPYWQCVVGRNFGSYVSF--ETHYIYFYLGKVKHINWTV-AQESAVDSSFFWGYLITQVPGGFFA-- 350 (744)
Q Consensus 286 ----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~-- 350 (744)
....++..............+ .............+.+.+. ...+++.+...++..++.++.+++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (524)
T 2xut_A 282 RARKSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVKPQWFEPAMMQALNPLLVMLLIPFNNFVLYP 361 (524)
T ss_dssp HSCCSCCSSSSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHSCCCSSSCHHHHHTTSGGGHHHHGGGTTTC---
T ss_pred hhhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhcCCCeeecHHHHHHHHHHHHHHhHHHHHhhhHH
Confidence 001111111111111100000 0000000000011122211 1345555555556666666666654
Q ss_pred --hccCCc----hhhHHHHHHHHHHHHHHHHHhh---------cChHHHHHHHHHHhhhhhhhhhHHhHHhhhccCccch
Q psy15142 351 --SRYPAN----RIFGTAIACTSFLHLFVPTAIK---------LNPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLER 415 (744)
Q Consensus 351 --Dr~Grr----~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~p~~~R 415 (744)
||.|+| +.+.++.++.+++.++ .+.. .+.+.+++..++.|++.+...+...+++.|.+|++.|
T Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~ 439 (524)
T 2xut_A 362 AIERMGVKLTALRKMGAGIAITGLSWIV--VGTIQLMMDGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMK 439 (524)
T ss_dssp ---------CCHHHHHTHHHHHHHHHHT--TTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCC
T ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 554432 4556666776666655 3332 3566677788899999999999999999999999999
Q ss_pred hHHHHHHHHHhhhHHHhhHHHHHHhhhcc--Cc---------hhHHHHHHHHHHHHHHHHHhhcccC
Q psy15142 416 SRLATIAFCGTYAGIVLGLPISAILTEHF--SW---------EAMFYFYGCMGLLWYLCWLWLSFEK 471 (744)
Q Consensus 416 g~~~g~~~~~~~~g~~ig~~i~~~l~~~~--gw---------~~~f~~~~~~~~~~~~~~~~~~~e~ 471 (744)
|+++|+.+....+|..++|.+.+.+.+.. +| +..|++.+++.++..++.+++.++.
T Consensus 440 g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (524)
T 2xut_A 440 GTIMSFWTLSVTVGNLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYARSY 506 (524)
T ss_dssp TTTHHHHGGGHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999887632 23 2336666666666666555554443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 744 | ||||
| d3e2ba1 | 87 | d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fru | 3e-25 | |
| d1pw4a_ | 447 | f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es | 1e-15 | |
| d1pw4a_ | 447 | f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es | 1e-07 | |
| d1pv7a_ | 417 | f.38.1.2 (A:) Lactose permease {Escherichia coli [ | 2e-07 |
| >d3e2ba1 d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 87 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DLC superfamily: DLC family: DLC domain: Dynein light chain 1 (DLC1) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 97.9 bits (244), Expect = 3e-25
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 248 KST-MDADMQQKAIDATKEGLEKFNIEREVATYIKQYFENAYGPYWQCVVGRNFGSYVSF 306
K+ M +MQQ A+D + LEK+NIE+++A YIK+ F+ Y P W C+VGRNFGSYV+
Sbjct: 7 KNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTH 66
Query: 307 ET-HYIYFYLGKV 318
ET H+IYFYLG+V
Sbjct: 67 ETRHFIYFYLGQV 79
|
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Score = 77.4 bits (189), Expect = 1e-15
Identities = 42/333 (12%), Positives = 91/333 (27%), Gaps = 8/333 (2%)
Query: 322 NWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIF--GTAIACTSFLHLFVPTAIKL 379
++ S Y ++ G + R G +A L +
Sbjct: 55 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATS 114
Query: 380 NPGSVIIVRICQGLVEGVCYPAVHGIWRFWAPPLERS-RLATIAFCGTYAGIVLGLPISA 438
+ + ++ G +G+ +P W ER ++ G + L
Sbjct: 115 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL 174
Query: 439 ILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLHPTISGRELLYIEKSLGSSVQVAM 498
+ W A Y +L L + + P E +
Sbjct: 175 GMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQE 234
Query: 499 PTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIGSLP 558
T + + ++ I +AN Y ++ + +YLK H + ++ + L
Sbjct: 235 LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLY 294
Query: 559 HLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATMA 618
G ++D + + +T + A + + +
Sbjct: 295 EYAGIPGTLLCGWMSDKVFRGNRGATGVF-----FMTLVTIATIVYWMNPAGNPTVDMIC 349
Query: 619 LCLGIEGRWTVVFLIAATVHFIGITFYAIFASG 651
+ + + V LI + A A+G
Sbjct: 350 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAG 382
|
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Score = 52.4 bits (124), Expect = 1e-07
Identities = 41/436 (9%), Positives = 87/436 (19%), Gaps = 43/436 (9%)
Query: 73 PSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQF------E 126
P R P ID R R+ + G+ + ++ N A
Sbjct: 5 PHKARLPAAEIDPTYR------RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSR 58
Query: 127 GRTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNC--------------- 171
G GF S + G ++D + L ++
Sbjct: 59 GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAV 118
Query: 172 -------GGFGMEAFFFVVVAYTKSEVTATMALCLGVAFSGFAISGYNVNHL-------- 216
G+ + + + ++ G + L
Sbjct: 119 MFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW 178
Query: 217 DIAPRYASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAIDATKEGLEKFNIEREV 276
A + + + F + + K +
Sbjct: 179 FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAK 238
Query: 277 ATYIKQYFENAYGPYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFF 336
+++ N Y + + + +
Sbjct: 239 QIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAG 298
Query: 337 WGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEG 396
+ R + + + NP +I I G +
Sbjct: 299 IPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIY 358
Query: 397 VCYPAVHGIWRFWAPPLERSR-LATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGC 455
+ AP G G V I + F W+ F
Sbjct: 359 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG 418
Query: 456 MGLLWYLCWLWLSFEK 471
+L + + + +
Sbjct: 419 GSILAVILLIVVMIGE 434
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Score = 51.3 bits (121), Expect = 2e-07
Identities = 34/359 (9%), Positives = 77/359 (21%), Gaps = 24/359 (6%)
Query: 129 TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTK 188
TG I + L + P G+L+D L + L + F F +
Sbjct: 45 TGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIIT--GMLVMFAPFFIFIFGPLLQYN 102
Query: 189 SEVTATMALCLGVAFSGFAISGYNVNHLDIAPRYASILMGMSNGIGTIDIFISYIGRRGK 248
V + + ++ R + I
Sbjct: 103 ILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMF 162
Query: 249 STMDADMQQKAIDA-------------------TKEGLEKFNIEREVATYIKQYFENAYG 289
+ + + T N + F
Sbjct: 163 TINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKL 222
Query: 290 PYWQCVVGRNFGSYVSFETHYIYFYLGKVKHINWTVAQESAVDSSFFWGYLITQVPGGFF 349
+ V +Y F+ + F+ V +
Sbjct: 223 WFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLI 282
Query: 350 ASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFW 409
+R A S + A + V+I++
Sbjct: 283 INRIGGKNALLLAGTIMSVRIIGSSFAT--SALEVVILKTLHMFEVPFLLVGCFKYITSQ 340
Query: 410 APPLERSRLATIAF-CGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWL 467
+ + + F ++ ++ + E ++ + G + L + L ++
Sbjct: 341 FEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFT 399
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 744 | |||
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 99.95 | |
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 99.9 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.85 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.75 |
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=3.4e-27 Score=257.85 Aligned_cols=262 Identities=13% Similarity=0.087 Sum_probs=211.4
Q ss_pred cccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHH--hhcChHHHHHHHHHHhhhhh
Q psy15142 319 KHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTA--IKLNPGSVIIVRICQGLVEG 396 (744)
Q Consensus 319 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~G~~~~ 396 (744)
.++|+|.++.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.++.+.. ...+++.+++.|++.|++.+
T Consensus 52 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 131 (447)
T d1pw4a_ 52 VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQG 131 (447)
T ss_dssp TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhh
Confidence 4689999999999999999999999999999999999999999999988888773211 23478889999999999999
Q ss_pred hhhhHHhHHhhhccCccchhHHHHHHHHHhhhHHHhhHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy15142 397 VCYPAVHGIWRFWAPPLERSRLATIAFCGTYAGIVLGLPISAILTEH-FSWEAMFYFYGCMGLLWYLCWLWLSFEKPCLH 475 (744)
Q Consensus 397 ~~~~~~~~~~~e~~p~~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~e~p~~~ 475 (744)
...+...++++|++|+++|++++++.+.+..+|..+++.+++.+... .+|++.|++.+++.++..++.+++.+++|+..
T Consensus 132 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (447)
T d1pw4a_ 132 MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSC 211 (447)
T ss_dssp HTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTT
T ss_pred hhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhc
Confidence 99999999999999999999999999999999999999998877664 47999999999888888777777777776554
Q ss_pred CCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH
Q psy15142 476 PTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKSTFHLQIQETGFIG 555 (744)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 555 (744)
.....++.+........+.............+..++++.++......++.....+.+..+.|.|+++..+++..+.+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T d1pw4a_ 212 GLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAY 291 (447)
T ss_dssp CCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHH
T ss_pred ccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhh
Confidence 33222221110000000011111112233456678889999998888998999999999999999988899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcC
Q psy15142 556 SLPHLLMTIVVPCGGMLADHLRKKG 580 (744)
Q Consensus 556 ~~~~~~~~i~~~~~g~l~dr~g~r~ 580 (744)
.+..+..+++.+++|++.||++++.
T Consensus 292 ~~~~~~~~~~~~~~g~~~~~~~~~~ 316 (447)
T d1pw4a_ 292 FLYEYAGIPGTLLCGWMSDKVFRGN 316 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred hcchhhhhhhhhhhhhhhhhccccc
Confidence 9999999999999999999999875
|
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1.8e-24 Score=235.99 Aligned_cols=335 Identities=13% Similarity=0.018 Sum_probs=225.8
Q ss_pred hccccc-ccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhc----CChhHHHHHH
Q psy15142 123 LQFEGR-TGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYT----KSEVTATMAL 197 (744)
Q Consensus 123 ~~~~~~-~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 197 (744)
++.+.. .|++.+++.++..++++++|+++||+ |||+++.+++++.+++.++++++ ++.+.++++|
T Consensus 54 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (447)
T d1pw4a_ 54 QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS----------NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL 123 (447)
T ss_dssp STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS----------CHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHH
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHH
Confidence 455554 49999999999999999999999999 88889999999999988888765 4778899999
Q ss_pred HHHHHhhhcccccccccccccCcc-hhhHHHHHHhhhhhhhhHHHhhhccCC-cccchhhH--H-Hh-Hhhh-----Hhh
Q psy15142 198 CLGVAFSGFAISGYNVNHLDIAPR-YASILMGMSNGIGTIDIFISYIGRRGK-STMDADMQ--Q-KA-IDAT-----KEG 266 (744)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~e~~p~-~rg~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~--~-~~-~~~~-----~~~ 266 (744)
++.|++.|...+...++++|+.|+ +||+++|+.+.+..+|.++++.+.... .....+.. . .. .... ...
T Consensus 124 ~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 203 (447)
T d1pw4a_ 124 FLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAM 203 (447)
T ss_dssp HHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHh
Confidence 999999999999999999999975 699999999999999888776532211 11111100 0 00 0000 000
Q ss_pred hhhh------------ch--hhHHHHHH------HHhhhhc-CCC--cceehhhhhhcccccchhhheeeeccccccccc
Q psy15142 267 LEKF------------NI--EREVATYI------KQYFENA-YGP--YWQCVVGRNFGSYVSFETHYIYFYLGKVKHINW 323 (744)
Q Consensus 267 ~~~~------------~~--~~~~~~~~------~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 323 (744)
..+. .. .++..+.. ++...+. .+. .|......++. .........+...+..+.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 282 (447)
T d1pw4a_ 204 MRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFV-YLLRYGILDWSPTYLKEVKHF 282 (447)
T ss_dssp CCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHBTTBSCC
T ss_pred cccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhh-hhhhhcchhhhhhhccccccc
Confidence 0000 00 00000000 0000011 111 11111111111 111111111222233567788
Q ss_pred CchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHH---HHHhhcChHHHHHHHHHHhhhhhhhhh
Q psy15142 324 TVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFV---PTAIKLNPGSVIIVRICQGLVEGVCYP 400 (744)
Q Consensus 324 s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~G~~~~~~~~ 400 (744)
+..+.++..++..++..++.+++|+++||++|++..........+..... ......+.+..+++.++.|++.++..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 362 (447)
T d1pw4a_ 283 ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVM 362 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHH
T ss_pred ccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998875544433332222221 011234566677777888988888888
Q ss_pred HHhHHhhhccCccchhHHHHHHHHHhhh-HHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhc
Q psy15142 401 AVHGIWRFWAPPLERSRLATIAFCGTYA-GIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLS 468 (744)
Q Consensus 401 ~~~~~~~e~~p~~~Rg~~~g~~~~~~~~-g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 468 (744)
....+..|.+|++.||++.|+.+...++ |.+++|++.|.+.+++||+..|++.+++.++..++..++.
T Consensus 363 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 431 (447)
T d1pw4a_ 363 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 431 (447)
T ss_dssp HHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888777 5677899999999999999999888887777666555543
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=4.4e-22 Score=213.06 Aligned_cols=336 Identities=10% Similarity=-0.010 Sum_probs=210.6
Q ss_pred hhhcccc-cccccccchHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhHHhhhhhHHHHHHHHHHhcCChhHHHH----
Q psy15142 121 AKLQFEG-RTGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEVTATM---- 195 (744)
Q Consensus 121 ~~~~~~~-~~g~~~~~~~~~~~~g~~~~G~lsDr~~~r~~l~~~~gRk~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 195 (744)
..+|.+. +.|++.+++.++..++++++|+++||+ |||+.++++..+.+++.++..+..+......
T Consensus 36 ~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~----------grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (417)
T d1pv7a_ 36 DINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----------GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILV 105 (417)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH----------TTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHH
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 3455555 349999999999999999999999999 6777888888878887777777665544333
Q ss_pred HHHHHHHhhhcccccccccccccC-cc--hhhHHHHHHhhhhhhhhHHHhhhccCCcccchhhHHHhHh---hhHh---h
Q psy15142 196 ALCLGVAFSGFAISGYNVNHLDIA-PR--YASILMGMSNGIGTIDIFISYIGRRGKSTMDADMQQKAID---ATKE---G 266 (744)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~e~~-p~--~rg~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~ 266 (744)
.+.+.+.+.+...........+.. ++ ++....+........+..+++.+................. .... .
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 185 (417)
T d1pv7a_ 106 GSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLF 185 (417)
T ss_dssp HHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 333333333333333222222222 22 2444555555555555555544322221111111000000 0000 0
Q ss_pred --h-hhh---chhhHH--------HHHHHHhhhhcCCCcceehhhh--hhcccccchhhheeeecccccccccCchhhHH
Q psy15142 267 --L-EKF---NIEREV--------ATYIKQYFENAYGPYWQCVVGR--NFGSYVSFETHYIYFYLGKVKHINWTVAQESA 330 (744)
Q Consensus 267 --~-~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 330 (744)
. +.. ..+++. .....+... .+..+...... .......................+.+....+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417)
T d1pv7a_ 186 FAKTDAPSSATVANAVGANHSAFSLKLALELFR--QPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGY 263 (417)
T ss_dssp SSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHhcccccchhhhhhhhhhcccccccccccccc--cccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhcc
Confidence 0 000 000000 001111111 11111111111 11111111111111111122334455666777
Q ss_pred HHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHhhhhhhhhhHHhHHhhhcc
Q psy15142 331 VDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGSVIIVRICQGLVEGVCYPAVHGIWRFWA 410 (744)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~e~~ 410 (744)
..+...++..++..+.+++.||+|+|+++.++.++.+++.++ ....++.+.+++..++.|++.+...+...+++.|.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 341 (417)
T d1pv7a_ 264 VTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIG--SSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQF 341 (417)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhc--cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 888888899999999999999999999999999998888877 677888998999999999999999999999999999
Q ss_pred CccchhHHHHHHH-HHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 411 PPLERSRLATIAF-CGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 411 p~~~Rg~~~g~~~-~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
|++.|+++.|+.. ....+|..++|.+.|.+.+++|++..|++.+++.++..++..++.++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 402 (417)
T d1pv7a_ 342 EVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG 402 (417)
T ss_dssp CGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999865 56779999999999999999999999999998888777776666543
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=1.3e-17 Score=177.64 Aligned_cols=271 Identities=10% Similarity=0.048 Sum_probs=164.9
Q ss_pred cccccccCchhhHHHHHHHHHHHHHhhhhhHHhhhccCCchhhHHHHHHHHHHHHHHHHHhhcChHH----HHHHHHHHh
Q psy15142 317 KVKHINWTVAQESAVDSSFFWGYLITQVPGGFFASRYPANRIFGTAIACTSFLHLFVPTAIKLNPGS----VIIVRICQG 392 (744)
Q Consensus 317 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G 392 (744)
..+++|+|.++.|++.+++.++..++++++|+++||+|||++++++.++.+++..+ .....+... .++.+++.+
T Consensus 34 l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 111 (417)
T d1pv7a_ 34 LHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAP--FFIFIFGPLLQYNILVGSIVGG 111 (417)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHH--HHHHTHHHHHHTTCHHHHHHTT
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH--HHHhhhhhhHHHHHHHHHHHhh
Confidence 45678999999999999999999999999999999999999999988888777766 333333222 334444444
Q ss_pred hhhhhhhhHHhHHhhhccCc--cchhHHHHHHHHHhhhHHHhhHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHhhccc
Q psy15142 393 LVEGVCYPAVHGIWRFWAPP--LERSRLATIAFCGTYAGIVLGLPISAILTEHFSWEAMFYFYGCMGLLWYLCWLWLSFE 470 (744)
Q Consensus 393 ~~~~~~~~~~~~~~~e~~p~--~~Rg~~~g~~~~~~~~g~~ig~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~e 470 (744)
.+.+...........+..++ +.+....+........+..+++.+++.+.+. +|+..+........+..++.++..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (417)
T d1pv7a_ 112 IYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTD 190 (417)
T ss_dssp TTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred hcccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhcc
Confidence 44444444433333333322 3445566777788888999999999888765 56666666666665665555566566
Q ss_pred CCCCCCCCChHHHHHHHHhhcccccccCCCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC
Q psy15142 471 KPCLHPTISGRELLYIEKSLGSSVQVAMPTLATTPWREFAHSMPVYAIIVANFCRSWNFYLLVLFQASYLKST---FHLQ 547 (744)
Q Consensus 471 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~g~s 547 (744)
++......++++. .............++.+..+......+.............+.+.... .+.+
T Consensus 191 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (417)
T d1pv7a_ 191 APSSATVANAVGA-------------NHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQG 257 (417)
T ss_dssp SCSSSCSSHHHHS-------------CCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHH
T ss_pred cccchhhhhhhhh-------------hcccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccc
Confidence 6554332211110 00111112233344444444433333333333333333333333221 1234
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCccchhhHHHHHHHHhHHHHHHHHHHHhccCchH
Q psy15142 548 IQETGFIGSLPHLLMTIVVPCGGMLADHLRKKGILSTTMVRKLFNCGGFGMEAFFFVVVAYTKSEV 613 (744)
Q Consensus 548 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (744)
....+.......++..++..+.+++.||.++++ ....+..+.++.++.....++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 313 (417)
T d1pv7a_ 258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKN----------ALLLAGTIMSVRIIGSSFATSAL 313 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHH----------HHHHHHHHHHHHHHHHHTCCCHH
T ss_pred hhhhcccccccccccccchhhhhhhhccccccc----------chhhhHHHHHHhhhccccccccc
Confidence 455666677778888999999999999999873 34444445555555555555443
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