Psyllid ID: psy15158
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 709 | 2.2.26 [Sep-21-2011] | |||||||
| Q6GNL7 | 902 | Cytosolic 10-formyltetrah | N/A | N/A | 0.873 | 0.686 | 0.512 | 0.0 | |
| Q63ZT8 | 902 | Cytosolic 10-formyltetrah | yes | N/A | 0.873 | 0.686 | 0.513 | 0.0 | |
| Q8K009 | 923 | Mitochondrial 10-formylte | yes | N/A | 0.873 | 0.670 | 0.519 | 0.0 | |
| Q3SY69 | 923 | Mitochondrial 10-formylte | yes | N/A | 0.873 | 0.670 | 0.488 | 0.0 | |
| P28037 | 902 | Cytosolic 10-formyltetrah | no | N/A | 0.873 | 0.686 | 0.474 | 0.0 | |
| Q8R0Y6 | 902 | Cytosolic 10-formyltetrah | no | N/A | 0.874 | 0.687 | 0.472 | 0.0 | |
| Q5RFM9 | 902 | Cytosolic 10-formyltetrah | no | N/A | 0.873 | 0.686 | 0.475 | 0.0 | |
| O75891 | 902 | Cytosolic 10-formyltetrah | no | N/A | 0.873 | 0.686 | 0.478 | 0.0 | |
| P51647 | 501 | Retinal dehydrogenase 1 O | no | N/A | 0.575 | 0.814 | 0.439 | 1e-105 | |
| O74187 | 500 | Aldehyde dehydrogenase OS | N/A | N/A | 0.588 | 0.834 | 0.414 | 1e-105 |
| >sp|Q6GNL7|AL1L1_XENLA Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/705 (51%), Positives = 472/705 (66%), Gaps = 86/705 (12%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTPA 71
I ++ E+IHNFIRG D PGA TV++ ++ F SS + +G P+ + G+ PA
Sbjct: 211 INWDQPAEDIHNFIRGNDKVPGAWTVVDDQQLTFFGSSFTRNGPAPDGQPLEIPGASRPA 270
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMI 131
++ GL+ G+DG+++ N + D KMI
Sbjct: 271 LVTKTGLVLFGNDGERLTVKNIQFE------------------------------DGKMI 300
Query: 132 HACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILN--SEVSEDTDFFQSGAGSMDVVR 189
A + K DSA L L+E E+ + ++ W IL SE+ + TDFF++GA SMDVVR
Sbjct: 301 PASQYFKTADSAA-LQLSEEEQKVSEEIRAAWRRILTNVSEIEDSTDFFKAGAASMDVVR 359
Query: 190 LIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVS 248
L+EE+K + LQNEDV M++ F +F V+ R D +L + ++ +N M V
Sbjct: 360 LVEEVKLKCNGLQLQNEDVYMATKFEEFIQMVVRRMRGEDGEEELVIDYVEKEINNMTVK 419
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSR 307
P+QLFING+F+++ GG S + INP + + IC V +A D+D A AA++AFE GEW +
Sbjct: 420 IPHQLFINGQFMDAEGGKSYDTINPTDGTAICKVSLAQISDIDRAVAAAKEAFENGEWGK 479
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
++ RDRG L+++LADLME+++EELATIES+DSGAVYTLALKTHVGMSI T++YFAGWCDK
Sbjct: 480 MNPRDRGRLLYRLADLMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDK 539
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I G TIPI ARPN N TFT+REPIGVCG++ PWNYPLMML+WK A CL AGNTVV+KP+
Sbjct: 540 IQGRTIPINQARPNRNLTFTRREPIGVCGIVIPWNYPLMMLAWKTAACLTAGNTVVLKPA 599
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+V+PLTALK AELSV+AG PKGVINILPG G++ G+ +S H +RK+GFTGST G +IM
Sbjct: 600 QVTPLTALKFAELSVKAGIPKGVINILPGAGSLIGQRLSDHPDVRKIGFTGSTPIGKQIM 659
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
KS A SN+KKVSLELGGKSPL+IF D +LDKAVRM M VFFNKGENCI+AGR+F++ +I
Sbjct: 660 KSCAVSNVKKVSLELGGKSPLIIFHDCDLDKAVRMGMSSVFFNKGENCIAAGRLFLEESI 719
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
+D F+++VV EVKKM NHKAHLDKLI+YC+ EG +L+ GGK++
Sbjct: 720 HDEFVKRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGGKLVYGGKQV 779
Query: 593 DRP-----------------------------------GDVDAVIKRANSTEYGLASGIF 617
+RP GD+D V+KRAN +E+GLASG+F
Sbjct: 780 ERPGFFFEPTIFTDVTDEMFIAKEESFGPVMIISKFNDGDIDGVLKRANDSEFGLASGVF 839
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
T DINKA+Y +K+ +GTVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 840 TKDINKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 884
|
Xenopus laevis (taxid: 8355) EC: 1EC: .EC: 5EC: .EC: 1EC: .EC: 6 |
| >sp|Q63ZT8|AL1L1_XENTR Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/705 (51%), Positives = 473/705 (67%), Gaps = 86/705 (12%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTPA 71
I ++ E IHNFIRG D PGA TV+ ++ F SS + +G P+ + G+ PA
Sbjct: 211 INWDQPAEAIHNFIRGNDKVPGAWTVVGDQQLTFFGSSFISNGPAPDGQPLEIPGAFRPA 270
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMI 131
++ GL+ G+DGQK ++V F+ D KMI
Sbjct: 271 VVTKTGLVLFGNDGQK--------------------LSVKNIQFE----------DGKMI 300
Query: 132 HACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILN--SEVSEDTDFFQSGAGSMDVVR 189
A + K DSA L L++ E+ ++ W IL SE+ + TDFF++GA SMDVVR
Sbjct: 301 PASQYYKTADSAA-LQLSDEEKKFSEEIRAAWKRILTNVSEIEDSTDFFKAGAASMDVVR 359
Query: 190 LIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVS 248
L+EE+K + LQNEDV M++ F +F V+ R D +L + ++ +N M V
Sbjct: 360 LVEEVKLKCNGLQLQNEDVYMATKFEEFIQMVVRRLRGEDGEEELVVDYVEKEINNMTVK 419
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSR 307
P+QLFING+F+++ GG + + +NP + + IC V +A D+D A AA++AFE GEW +
Sbjct: 420 IPHQLFINGQFIDAEGGKTYDTVNPTDGTAICKVSLAQVSDIDRAVAAAKEAFENGEWGK 479
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
++ RDRG ++++LAD+ME+++EELATIES+DSGAVYTLALKTHVGMSI T++YFAGWCDK
Sbjct: 480 MNPRDRGRILYRLADIMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDK 539
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I GSTIPI ARPN N TFT+REPIGVCG++ PWNYPLMML+WK A CLAAGNTVV+KP+
Sbjct: 540 IQGSTIPINQARPNRNLTFTRREPIGVCGIVIPWNYPLMMLAWKTAACLAAGNTVVLKPA 599
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+V+PLTALK AELSV+AG PKGVINILPG G++ G+ +S H +RK+GFTGST G IM
Sbjct: 600 QVTPLTALKFAELSVKAGIPKGVINILPGAGSLIGQRLSDHPDVRKIGFTGSTPIGKHIM 659
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
KS A N+KKVSLELGGKSPL+IF D +LDKAVRM M VFFNKGENCI+AGR+F++ +I
Sbjct: 660 KSCAVGNVKKVSLELGGKSPLIIFQDCDLDKAVRMGMSSVFFNKGENCIAAGRLFLEESI 719
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
+D F+++VV EVKKM NHKAHLDKLI+YC+ EGA+L+ GGK++
Sbjct: 720 HDEFVKRVVGEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGAKLVYGGKQV 779
Query: 593 DRP-----------------------------------GDVDAVIKRANSTEYGLASGIF 617
+RP GDVD V+KRAN+TE+GLASG+F
Sbjct: 780 ERPGFFFEPTIFTDVTDEMFIAKEESFGPIMIISKFKDGDVDEVLKRANNTEFGLASGVF 839
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
T DI+KA+Y +K+ +GTVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 840 TKDISKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 884
|
Xenopus tropicalis (taxid: 8364) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|Q8K009|AL1L2_MOUSE Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/704 (51%), Positives = 470/704 (66%), Gaps = 85/704 (12%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
+ ++ E +HN+IRG D PGA +NG V + SS+ + G P+ + G+ P +
Sbjct: 233 VSWDQPAEGLHNWIRGHDKVPGAWAEINGQMVTFYGSSLLTSSVPSGEPLDIRGAKKPGL 292
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+ +GL+ G+DG+ L++R+L D KMI
Sbjct: 293 VTKNGLVLFGNDGKA------------LMVRNLQFE------------------DGKMIP 322
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGIL-NSEVSED-TDFFQSGAGSMDVVRL 190
A + +++ + LT E + +K IWA IL N+ V ED TDFF+SGA SMDVVRL
Sbjct: 323 ASQYFSAGETSV-VELTAEELKVAETIKVIWARILSNTPVIEDSTDFFKSGASSMDVVRL 381
Query: 191 IEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSF 249
+EEI+++ + LQNEDV M++ F DF KV+ R D ++ + + VN M V
Sbjct: 382 VEEIRQSCGGLQLQNEDVYMATKFGDFIQKVVRRLRGEDEEAEMVVDYVSKEVNGMTVKI 441
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRL 308
P Q FING+FV++ G + +NP + +TIC V A+ DVD A AA+ AFE GEW R+
Sbjct: 442 PYQCFINGQFVDAEDGETYATVNPTDGTTICRVSYASLADVDRAVAAAKDAFENGEWGRM 501
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+ARDRG LM++LADLME+N+EELATIE+LDSGAVYTLALKTH+GMS+ T++YFAGWCDKI
Sbjct: 502 NARDRGRLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKI 561
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
GSTIPI ARPN N TFTK+EP+G C +I PWNYPLMML+WK A CLAAGNT+V+KP++
Sbjct: 562 QGSTIPINQARPNYNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQ 621
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALK AEL+V+AGFPKGVINI+PG+G V G+ +SQH IRK+GFTGST G +IMK
Sbjct: 622 VTPLTALKFAELTVKAGFPKGVINIIPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMK 681
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
S A SNLKKVSLELGGKSPL+IF D +L+KAVRM MG VFFNKGENCI+AGR+FV+ I+
Sbjct: 682 SCAVSNLKKVSLELGGKSPLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIH 741
Query: 549 DAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ +VV E+KKM NH+AHL+KL+ YCE EGA L+ GG+++
Sbjct: 742 DEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQ 801
Query: 594 RP-----------------------------------GDVDAVIKRANSTEYGLASGIFT 618
RP GD+D V++RAN+TEYGLASG+FT
Sbjct: 802 RPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFT 861
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
DINKAMY DK+++GTVFINTYNKTDVAAPFGG KQSGFGKDL
Sbjct: 862 RDINKAMYVSDKLEAGTVFINTYNKTDVAAPFGGMKQSGFGKDL 905
|
Mus musculus (taxid: 10090) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|Q3SY69|AL1L2_HUMAN Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/747 (48%), Positives = 469/747 (62%), Gaps = 128/747 (17%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I ++ E +HN+IRG D PGA T +NG V + S++ + G P+ ++G+ P +
Sbjct: 233 ISWDQSAEVLHNWIRGHDKVPGAWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGL 292
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+ +GL+ G+DG+ + N + D KMI
Sbjct: 293 VTKNGLVLFGNDGKALTVRNLQFE------------------------------DGKMIP 322
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGIL-NSEVSED-TDFFQSGAGSMDVVRL 190
A + +++ + LT E + +K IWAGIL N + ED TDFF+SGA SMDV RL
Sbjct: 323 ASQYFSTGETSV-VELTAEEVKVAETIKVIWAGILSNVPIIEDSTDFFKSGASSMDVARL 381
Query: 191 IEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSF 249
+EEI++ + LQNEDV M++ F F KV+ R D +L + I VN++ V
Sbjct: 382 VEEIRQKCGGLQLQNEDVYMATKFEGFIQKVVRKLRGEDQEVELVVDYISKEVNEIMVKM 441
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRL 308
P Q FING+F ++ G + + INP + STIC V A+ DVD A AA+ AFE GEW R+
Sbjct: 442 PYQCFINGQFTDADDGKTYDTINPTDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRM 501
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+AR+RG LM++LADL+E+N+EELATIE+LDSGAVYTLALKTH+GMS+ T++YFAGWCDKI
Sbjct: 502 NARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKI 561
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
GSTIPI ARPN N TFTK+EP+GVC +I PWNYPLMML+WK A CLAAGNT+V+KP++
Sbjct: 562 QGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQ 621
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALK AELSV+AGFPKGVINI+PG+G + G+ +S+H IRK+GFTGST G +IMK
Sbjct: 622 VTPLTALKFAELSVKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMK 681
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
S A SNLKKVSLELGGKSPL+IF+D LDKAVRM MG VFFNKGENCI+AGR+FV+ +I+
Sbjct: 682 SCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIH 741
Query: 549 DAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ +VV E+KKM NHKAHL+KL+ YCE EGA L+ GG+++
Sbjct: 742 DEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQ 801
Query: 594 RPG-----------------------------------DVDAVIKRANSTEYGLASGIFT 618
RPG D+D V++RANSTEYGLASG+FT
Sbjct: 802 RPGFFMEPTVFTDVEDYMYLAKEESFGPIMVISKFQNGDIDGVLQRANSTEYGLASGVFT 861
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678
DI NKAMY +K+++GT
Sbjct: 862 RDI-------------------------------------------NKAMYVSEKLEAGT 878
Query: 679 VFINTYNKTDVAAPFGGFKQSGFGKDL 705
VFINTYNKTDVAAPFGG KQSGFGKDL
Sbjct: 879 VFINTYNKTDVAAPFGGVKQSGFGKDL 905
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|P28037|AL1L1_RAT Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/748 (47%), Positives = 467/748 (62%), Gaps = 129/748 (17%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA-NIEGTPVTVEGSDTPA 71
I ++ E IHN+IRG D PGA T G ++ F S++ + +G + + G+ P
Sbjct: 211 INWDQPAEAIHNWIRGNDKVPGAWTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPG 270
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMI 131
++ GL+ G+D R L++ N+ L D KM+
Sbjct: 271 VVTKAGLILFGNDD-----------------RMLLVKNIQ-------------LEDGKMM 300
Query: 132 HACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVVR 189
A F K S+ DL LTE+E A +++ W IL + EV + TDFF+SGA S+DVVR
Sbjct: 301 PASQFFKGSASS-DLELTEAELATAEAVRSSWMRILPNVPEVEDSTDFFKSGAASVDVVR 359
Query: 190 LIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVS 248
L+EE+KE + L+NEDV M++ FR F ++ R D ++ ++ VNK+ +
Sbjct: 360 LVEEVKELCDGLELENEDVYMATTFRGFIQLLVRKLRGEDDESECVINYVEKAVNKLTLQ 419
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSR 307
P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AFE G W +
Sbjct: 420 MPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGK 479
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++YFAGWCDK
Sbjct: 480 INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK 539
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGNTVV+KP+
Sbjct: 540 IQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA 599
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST G IM
Sbjct: 600 QVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 659
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
KS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR+FV+ +I
Sbjct: 660 KSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESI 719
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
++ F++KVV EV+KM NH+AHL KL++YC++ EGA L+ GG ++
Sbjct: 720 HNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 779
Query: 593 DRPG-----------------------------------DVDAVIKRANSTEYGLASGIF 617
RPG DVDAV+ RAN+TE+GLASG+F
Sbjct: 780 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 839
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSG 677
T DI NKA+Y DK+ +G
Sbjct: 840 TRDI-------------------------------------------NKALYVSDKLQAG 856
Query: 678 TVFINTYNKTDVAAPFGGFKQSGFGKDL 705
TVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 857 TVFINTYNKTDVAAPFGGFKQSGFGKDL 884
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|Q8R0Y6|AL1L1_MOUSE Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/749 (47%), Positives = 464/749 (61%), Gaps = 129/749 (17%)
Query: 12 VIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTP 70
+I ++ E IHN+IRG D PGA T G ++ F S++ + +G + + G+ P
Sbjct: 210 MINWDQPAEAIHNWIRGNDKVPGAWTEACGQKLTFFNSTLNTSGLVAQGEALPIPGAHRP 269
Query: 71 AILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKM 130
++ GL+ G+D R L++ N+ L D KM
Sbjct: 270 GLVTKAGLILFGNDD-----------------RMLLVKNIQ-------------LEDGKM 299
Query: 131 IHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVV 188
+ A F K S+ L LTE E A +++ W IL + EV + TDFF+SGA S+DVV
Sbjct: 300 MPASQFFKGSASSA-LELTEEELATAEAVRSSWMRILPNVPEVEDSTDFFKSGAASVDVV 358
Query: 189 RLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDV 247
RL+EE+KE + L+NEDV M++ F DF ++ R D ++ ++ V K+ +
Sbjct: 359 RLVEEVKELCDGLELENEDVYMATTFGDFIQLLVRKLRGEDGESECVINYVEKAVKKLTL 418
Query: 248 SFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWS 306
P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AFE G W
Sbjct: 419 QMPYQLFIGGEFVDAEGAKTYSTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWG 478
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
+++ARDRG L+++LADLMEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++YFAGWCD
Sbjct: 479 KINARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCD 538
Query: 367 KILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426
KI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGNTVV+KP
Sbjct: 539 KIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKP 598
Query: 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST G I
Sbjct: 599 AQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHI 658
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
MKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR+FV+ +
Sbjct: 659 MKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDS 718
Query: 547 IYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKR 591
I+D F++KVV EV KM NH+AHL KL++YC++ EGA L+ GG +
Sbjct: 719 IHDQFVQKVVEEVGKMKIGNPLDRDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQ 778
Query: 592 LDRPG-----------------------------------DVDAVIKRANSTEYGLASGI 616
+ RPG DVDAV+ RAN+TE+GLASG+
Sbjct: 779 VPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGV 838
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676
FT DI NKA+Y DK+ +
Sbjct: 839 FTRDI-------------------------------------------NKALYVSDKLQA 855
Query: 677 GTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
GTVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 856 GTVFVNTYNKTDVAAPFGGFKQSGFGKDL 884
|
Mus musculus (taxid: 10090) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|Q5RFM9|AL1L1_PONAB Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/748 (47%), Positives = 465/748 (62%), Gaps = 129/748 (17%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTPA 71
I ++ E IHN+IRG D PGA T ++ F S++ + EG + + G+ P
Sbjct: 211 INWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPG 270
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMI 131
++ GL+ G+D + L++ N+ L D KMI
Sbjct: 271 VVTKAGLILFGNDD-----------------KMLLVKNIQ-------------LEDGKMI 300
Query: 132 HACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVVR 189
A NF K S+ L LTE+E ++++W IL + EV + TDFF+SGA S+DVVR
Sbjct: 301 LASNFFKGAASSA-LELTEAELVTAEAVRSVWQRILPNVLEVEDSTDFFKSGAASVDVVR 359
Query: 190 LIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVS 248
L+EE+KE + L+NEDV M+S F DF ++ R D + + + +++ VNK +
Sbjct: 360 LVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDDEEGECSIDYVEMAVNKRTIR 419
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSR 307
P+QLFI GEFV++ G + E INP + S IC V +A DVD A AA+ AFE G W +
Sbjct: 420 IPHQLFIGGEFVDAEGAKTYETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGK 479
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
+SARDRG L+++LADLMEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++YFAGWCDK
Sbjct: 480 ISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK 539
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I GSTIPI ARPN N T T++EP+GVCG+I PWNYPLMMLSWK A CLAAGNTVV+KP+
Sbjct: 540 IQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPA 599
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+V+PLTALK AEL+++AG PKGV+N+LPG+G++ G+ +S H +RK+GFTGST G IM
Sbjct: 600 QVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 659
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
KS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR+FV+ +I
Sbjct: 660 KSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSI 719
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
+D F+ +VV EV+KM NH AHL KL++YC++ EGA L+ GG ++
Sbjct: 720 HDEFVRRVVEEVRKMKVGDPLDRDTDHGPQNHHAHLMKLMEYCQRGVKEGATLVCGGNQV 779
Query: 593 DRPG-----------------------------------DVDAVIKRANSTEYGLASGIF 617
RPG DVD V+ RAN+TE+GLASG+F
Sbjct: 780 PRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDVDTVLSRANATEFGLASGVF 839
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSG 677
T DI NKA+Y DK+ +G
Sbjct: 840 TRDI-------------------------------------------NKALYVSDKLQAG 856
Query: 678 TVFINTYNKTDVAAPFGGFKQSGFGKDL 705
TVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 857 TVFVNTYNKTDVAAPFGGFKQSGFGKDL 884
|
Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|O75891|AL1L1_HUMAN Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/748 (47%), Positives = 464/748 (62%), Gaps = 129/748 (17%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTPA 71
I ++ E IHN+IRG D PGA T ++ F S++ + EG + + G+ P
Sbjct: 211 INWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPG 270
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMI 131
++ GL+ G+D + L++ N+ L D KMI
Sbjct: 271 VVTKAGLILFGNDD-----------------KMLLVKNIQ-------------LEDGKMI 300
Query: 132 HACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVVR 189
A NF K S+ L LTE+E ++++W IL EV + TDFF+SGA S+DVVR
Sbjct: 301 LASNFFKGAASSV-LELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVR 359
Query: 190 LIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVS 248
L+EE+KE + L+NEDV M+S F DF ++ R D + + + +++ VNK V
Sbjct: 360 LVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDDEEGECSIDYVEMAVNKRTVR 419
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSR 307
P+QLFI GEFV++ G + E INP + S IC V +A DVD A AA+ AFE G W +
Sbjct: 420 MPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGK 479
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
+SARDRG LM++LADLMEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++YFAGWCDK
Sbjct: 480 ISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK 539
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I GSTIPI ARPN N T T++EP+GVCG+I PWNYPLMMLSWK A CLAAGNTVV+KP+
Sbjct: 540 IQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPA 599
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+V+PLTALK AEL+++AG PKGV+N+LPG+G++ G+ +S H +RK+GFTGST G IM
Sbjct: 600 QVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 659
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
KS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR+FV+ +I
Sbjct: 660 KSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSI 719
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
+D F+ +VV EV+KM NH AHL KL++YC+ EGA L+ GG ++
Sbjct: 720 HDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQV 779
Query: 593 DRPG-----------------------------------DVDAVIKRANSTEYGLASGIF 617
RPG D+DAV+ RAN+TE+GLASG+F
Sbjct: 780 PRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVF 839
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSG 677
T DI NKA+Y DK+ +G
Sbjct: 840 TRDI-------------------------------------------NKALYVSDKLQAG 856
Query: 678 TVFINTYNKTDVAAPFGGFKQSGFGKDL 705
TVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 857 TVFVNTYNKTDVAAPFGGFKQSGFGKDL 884
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 6 |
| >sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/462 (43%), Positives = 274/462 (59%), Gaps = 54/462 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
++FIN E+ +SV G +NPA E IC V+ + DVD A AA +AF+ W +
Sbjct: 21 TKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTM 80
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L+ KLADLME+++ LATIE+++ G V+ A + +G SI KY AGW DKI
Sbjct: 81 DASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKI 140
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP FTFT+REPIGVCG I PWN+PL+M WK+ P L+ GNTVV+KP+E
Sbjct: 141 HGQTIP----SDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAE 196
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL +A L AGFP GV+NI+PG G G AIS H+ + KV FTGST G I +
Sbjct: 197 QTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +SNLK+V+LELGGKSP ++F D +LD AV + GVF+++G+ C++A RIFV+ ++Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316
Query: 549 DAFLEKVVTEVKK----------MNH-----KAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ K V KK +N K DK++D E K EGA+L GG R
Sbjct: 317 DEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 376
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G +D VIKRAN+T YGLA+G+FT D
Sbjct: 377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKD 436
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+++A+ + +G V++N Y PFGGFK SG G++L
Sbjct: 437 LDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGREL 478
|
Is capable of converting 9-cis and all-trans retinal to corresponding retinoic acid with high efficiency, 9-cis retinal being 2-fold more active than all-trans retinal. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|O74187|ALDH_AGABI Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/470 (41%), Positives = 279/470 (59%), Gaps = 53/470 (11%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
V K S LFINGEFV+ V ++++ +NPAN I + A D+DIA AA KAF
Sbjct: 13 VYKGSTSINTGLFINGEFVDGVKNTTIDVVNPANGKLITKISEATEADIDIAVEAAHKAF 72
Query: 302 EGEWS-RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E W S RG +++KLA LME+N ++L+ IE+LD+G + A + +SI T K+
Sbjct: 73 ETTWGLNCSGSKRGDMLYKLAQLMEKNIDDLSAIEALDNGKTFLWAKSVDLSLSISTIKH 132
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G I + T+++ EPIGV G I PWN+PL+ML+WK+ P LA GN
Sbjct: 133 YAGWADKNFGQVIETDEKK----LTYSRHEPIGVVGQIIPWNFPLLMLAWKIGPALATGN 188
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
+V+KPSE +PL+AL++ L AGFP GV+N++ G G+ TG+AIS H+KI KV FTGST
Sbjct: 189 CIVLKPSEFTPLSALRMCALIQEAGFPPGVVNVVTGYGSTTGQAISSHMKIDKVAFTGST 248
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
+ G K+M++AA+SNLK V+LELGGKSP+VIFDD +L+++V + G+F+N G+ C + R
Sbjct: 249 LVGRKVMEAAAKSNLKNVTLELGGKSPVVIFDDADLEQSVNWTAHGLFWNHGQACCAGTR 308
Query: 541 IFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARL 585
IFV IYD FL+K ++K++ + D+++ Y E ++EGA +
Sbjct: 309 IFVQEGIYDKFLQKFTDKIKEIKLGDPFGLGIDQGPQVSQIQYDRIMSYIESGRAEGATV 368
Query: 586 LIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGL 612
+GG+R G D VIK+AN + YGL
Sbjct: 369 HVGGERHGNEGYFIQPTIFTDTTPDMKIVKEEIFGPVGAVIKFKDGKEVIKQANDSNYGL 428
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +F+ DINKA+ +GT ++N N D PFGG+KQSG G++L
Sbjct: 429 AAAVFSQDINKAIETAHAFKAGTAWVNCANTIDAGVPFGGYKQSGIGREL 478
|
Agaricus bisporus (taxid: 5341) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 709 | ||||||
| 328713300 | 922 | PREDICTED: 10-formyltetrahydrofolate deh | 0.873 | 0.671 | 0.592 | 0.0 | |
| 357631685 | 927 | putative aldehyde dehydrogenase [Danaus | 0.873 | 0.667 | 0.555 | 0.0 | |
| 332029989 | 899 | 10-formyltetrahydrofolate dehydrogenase | 0.868 | 0.685 | 0.547 | 0.0 | |
| 156537109 | 902 | PREDICTED: aldehyde dehydrogenase family | 0.860 | 0.676 | 0.540 | 0.0 | |
| 91084907 | 915 | PREDICTED: similar to aldehyde dehydroge | 0.870 | 0.674 | 0.535 | 0.0 | |
| 340729606 | 919 | PREDICTED: aldehyde dehydrogenase family | 0.870 | 0.671 | 0.537 | 0.0 | |
| 291233521 | 923 | PREDICTED: aldehyde dehydrogenase 1 fami | 0.877 | 0.673 | 0.522 | 0.0 | |
| 307186303 | 900 | 10-formyltetrahydrofolate dehydrogenase | 0.870 | 0.685 | 0.542 | 0.0 | |
| 340729604 | 902 | PREDICTED: aldehyde dehydrogenase family | 0.870 | 0.684 | 0.537 | 0.0 | |
| 380020652 | 900 | PREDICTED: LOW QUALITY PROTEIN: cytosoli | 0.870 | 0.685 | 0.552 | 0.0 |
| >gi|328713300|ref|XP_001951227.2| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/701 (59%), Positives = 513/701 (73%), Gaps = 82/701 (11%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
+ ++ G +I NFIRGLDSSPGA T++N EVK++ SS+W + G VTV+ PAI
Sbjct: 235 VDWSRSGVDIQNFIRGLDSSPGAWTIINETEVKLYKSSIWTNETPTGEQVTVDTIQFPAI 294
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+H +GLL T +DG +K+N++RL VD KM+
Sbjct: 295 VHSNGLLITCNDG-------------------------------LKINIERLSVDGKMMA 323
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIE 192
A N+G + + T+ E+A IPV+++IW ILN E+ +DT FFQSGAGSMDVVRLIE
Sbjct: 324 ASNYGNADTVQETIDYTDQEKAYIPVVESIWKNILNMEIGKDTHFFQSGAGSMDVVRLIE 383
Query: 193 EIKENLQITLQNEDVLMSSVFRDFYIKVIEVSR-QGDVSNQLNHESIKLNVNKMDVSFPN 251
EIK+ L+ TL+N+DV MS VF DF +++ SR D + ++ ++ + ++VN M + F
Sbjct: 384 EIKDKLKFTLKNDDVYMSPVFSDFCNTLVKRSRGSTDDNTRVEYDPVVVDVNNMKLQFAK 443
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
QLFING+FV+S G ++ECINPA+ES ICS+Q A+ DVD A +AA +AFEGEWS +S R
Sbjct: 444 QLFINGQFVDSESGKTLECINPADESVICSIQCASEADVDQAVIAASRAFEGEWSEMSPR 503
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
DRG +++K+ADL+++N+EELATIES+DSGAVYTLALKTH+GMSID WKYFAGW DKI G
Sbjct: 504 DRGAVLYKIADLLDKNREELATIESIDSGAVYTLALKTHIGMSIDVWKYFAGWADKIHGQ 563
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIPI+HARPN N TFTK+EP GVCG+ITPWNYPLMMLSWKMA CLAAGNTVVMKP+EVSP
Sbjct: 564 TIPISHARPNRNLTFTKKEPFGVCGIITPWNYPLMMLSWKMAACLAAGNTVVMKPTEVSP 623
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALK AELSV AGFP GVINILPG G+ G AI++H IRKVGFTGST TG IMK++A
Sbjct: 624 LTALKFAELSVEAGFPAGVINILPGLGSEAGRAIAEHPDIRKVGFTGSTATGHAIMKASA 683
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
ESNLKKVSLELGGKSPL+I DD +LDK+VRMSMGGVFFNKGENCI+AGR+FV+S+I+D F
Sbjct: 684 ESNLKKVSLELGGKSPLIILDDCDLDKSVRMSMGGVFFNKGENCIAAGRVFVESSIHDKF 743
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
++KVV EVKK+ NHKAHL+KLI+YC+KAK+EGA L IGGKR+DRPG
Sbjct: 744 IDKVVEEVKKIKIGNPLERDTHHGPQNHKAHLEKLINYCKKAKNEGAELKIGGKRVDRPG 803
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
D+DAVIKRANST+YGL+SGIFT DI
Sbjct: 804 YYFEPTVFTGVEDHMFIAQEEAFGPIMAVTKFSSSDLDAVIKRANSTDYGLSSGIFTKDI 863
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+KA+ F +KID+GTVFINTYNKTDVAAPFGGFK+SGFGKDL
Sbjct: 864 SKALRFAEKIDAGTVFINTYNKTDVAAPFGGFKKSGFGKDL 904
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357631685|gb|EHJ79154.1| putative aldehyde dehydrogenase [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/715 (55%), Positives = 489/715 (68%), Gaps = 96/715 (13%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLN-------------GIEVKVFASSMWE-DANIE 58
I ++ G +HNFIRGLDSSPGA+T + IE+K F SS+WE + E
Sbjct: 226 IDWSKGGLALHNFIRGLDSSPGATTFIKPQNKDGVDKTSDANIEIKFFGSSLWEAEYETE 285
Query: 59 GTPVTVEGSDTPAILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMK 118
G + + G + PA++H DGLL T +DG +K
Sbjct: 286 GDKLFITGLNKPAVVHADGLLITANDG-------------------------------IK 314
Query: 119 VNVKRLLVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFF 178
+N++RL V+ KMI+A NF K ++ L LT E+ I + +W IL E+ DTDFF
Sbjct: 315 LNIQRLKVNGKMINAQNFYKGSENKVSLDLTAEEKQFIEKARDVWKAILRIEIENDTDFF 374
Query: 179 QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESI 238
SGAGSMDVVRL+EEIK+ ++ LQNED+ M++ F DFY I R G S ++ ++ +
Sbjct: 375 ASGAGSMDVVRLVEEIKDISELELQNEDIYMNTTFEDFYNAAILKQRGGSGSKEVIYDGV 434
Query: 239 KLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAE 298
++ +NKM + FP QLFINGEFVNS GG + +NP +ES IC VQ A DVD A AAE
Sbjct: 435 EMEINKMKIKFPTQLFINGEFVNSDGGKTTAIVNPTDESVICKVQAATVSDVDRAVKAAE 494
Query: 299 KAF-EGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDT 357
KAF EGEWS++SAR+RG L+FKLADLMEQ+KEELATIES+DSGAVYTLALKTHVGMSI+T
Sbjct: 495 KAFGEGEWSKISARERGQLLFKLADLMEQHKEELATIESIDSGAVYTLALKTHVGMSIET 554
Query: 358 WKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLA 417
W+YFAGWCDKI GSTIPI+HARPN N T TKREPIGVCGLITPWNYPLMMLSWKMA CLA
Sbjct: 555 WRYFAGWCDKITGSTIPISHARPNKNLTLTKREPIGVCGLITPWNYPLMMLSWKMAACLA 614
Query: 418 AGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFT 477
AGNTVVMKP+ V PLTALK AEL V AG P GV+NI+ G+GA+ G+A++ H +IRK+GFT
Sbjct: 615 AGNTVVMKPAAVCPLTALKFAELCVLAGIPPGVVNIVTGSGALAGQALADHPRIRKLGFT 674
Query: 478 GSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCIS 537
GST G IMKS A SNLKKVSLELGGKSPL+IF+D +LDKAV+ M VFFNKGENCI+
Sbjct: 675 GSTEIGQTIMKSCAASNLKKVSLELGGKSPLIIFEDCDLDKAVKNGMASVFFNKGENCIA 734
Query: 538 AGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEG 582
AGR+FV+ I+D F+ +VV E KKM NHKAH+DKLI Y E EG
Sbjct: 735 AGRLFVEEKIHDEFVRRVVEETKKMSIGDPLNRGTAHGPQNHKAHMDKLISYVETGVKEG 794
Query: 583 ARLLIGGKRLDRPG-----------------------------------DVDAVIKRANS 607
A+L+ GGKRLDRPG ++D VI+RAN+
Sbjct: 795 AKLVYGGKRLDRPGYFFQPTIFTDVTDNMVIAKEESFGPIMIISKFSSNNLDEVIRRANN 854
Query: 608 TEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
TEYGLASG+FT D+++A+ +++++GTVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 855 TEYGLASGVFTKDVSRALRVAERVEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 909
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332029989|gb|EGI69814.1| 10-formyltetrahydrofolate dehydrogenase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/701 (54%), Positives = 483/701 (68%), Gaps = 85/701 (12%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I + +E+H+FIRGLDS+PGA T L+G EV++F SS+W D E TV + I
Sbjct: 215 IDWTKPAKELHDFIRGLDSTPGAWTTLDGEEVRLFGSSLWSDKQPE-VEKTVNLEERKGI 273
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+H GLL + VDGQ+ VNV+R+ K IH
Sbjct: 274 VHQRGLLI------------EAVDGQF-------------------VNVERIKTGTKTIH 302
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIE 192
A +G+ DS + + TE E I L+ IW IL +V EDTDFF SG GSMDVVRL+E
Sbjct: 303 ASKYGQVNDS-QVVEFTEKELNITNSLRQIWTDILKIDVDEDTDFFASGGGSMDVVRLVE 361
Query: 193 EIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQ 252
E+K+N ++LQN DV M+ VF++F VI +R + ++ ++++++ VN M + FP Q
Sbjct: 362 EVKDNFGVSLQNIDVFMAPVFKEFATTVILTARGNLAAKEIKYDAVEIQVNNMILRFPRQ 421
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSAR 311
LFINGEFVN G+ + INP +ES ICSV+ N++DVD A AA+KAFE GEW ++SAR
Sbjct: 422 LFINGEFVNG-HGNPVNTINPHDESVICSVESGNAEDVDRAVRAAKKAFEEGEWGKISAR 480
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+RG L+FKLADLME++KEELAT+E+LDSGAVYTLALKTHVGMSI+TW+YFAGWCDKI GS
Sbjct: 481 ERGALLFKLADLMEEHKEELATLETLDSGAVYTLALKTHVGMSIETWRYFAGWCDKIQGS 540
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIPI+HARPN N TFT+REPIGVCGL+TPWNYPLMMLSWKMA CLAAGNTVVMKP++ SP
Sbjct: 541 TIPISHARPNRNLTFTRREPIGVCGLVTPWNYPLMMLSWKMAACLAAGNTVVMKPAQASP 600
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALK AELS RAG P GVINI+ G G+ G I +H IRK+GFTGST G IMK A
Sbjct: 601 LTALKFAELSARAGIPSGVINIVCGVGSAVGNVIVEHPLIRKLGFTGSTQIGQTIMKCCA 660
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+SNLKKVSLELGGKSPLVIF+D ++ +AVR+ MG VFFNKGENCI+AGR+FV+ I+D F
Sbjct: 661 DSNLKKVSLELGGKSPLVIFEDADMQQAVRIGMGSVFFNKGENCIAAGRLFVEETIHDEF 720
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
+ +VV E+KK+ NHKAHLDKL+++ + EGA+L+ GGKRL+RPG
Sbjct: 721 VRRVVDEIKKITIGNPLDRSTAHGPQNHKAHLDKLLEFVQSGVEEGAKLVYGGKRLNRPG 780
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
++D +I RAN+TE+GLASG+ T DI
Sbjct: 781 WYFEPTVFTDVEDNMYIAKEESFGPVMVISKFSSKNIDQMIARANNTEFGLASGVLTKDI 840
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
++A+ F +KI++GTVFINTYNKTDVAAPFGGFK SGFGKDL
Sbjct: 841 SRALRFAEKIEAGTVFINTYNKTDVAAPFGGFKMSGFGKDL 881
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156537109|ref|XP_001602871.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/697 (54%), Positives = 479/697 (68%), Gaps = 87/697 (12%)
Query: 19 GEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWE--DANIEGTPVTVEGSDTPAILHPD 76
++ H+FIR LDS+PGA T+++G E +++ SS+W+ + GT V ++G PA++H
Sbjct: 222 AKQAHDFIRALDSTPGAWTLIDGEEARLYGSSLWKGNETIPSGTAVDIDGR--PAVVHET 279
Query: 77 GLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIHACNF 136
GLL Q DG +L NV+ L + + I A +
Sbjct: 280 GLLM------------QAEDGNWL-------------------NVEVLKIGTRTISASKY 308
Query: 137 GKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIEEIKE 196
G+ + + L TE E + ++ IW IL ++ +DTDFF GAGSMDVVRL+EE+K+
Sbjct: 309 GQAQSNGTCLEFTEEERQAVETIRKIWQSILRRDIDDDTDFFACGAGSMDVVRLVEEMKD 368
Query: 197 NLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFIN 256
+L I LQN DV M+ VF + I R S + +E++ L N MD+SFP QLF+N
Sbjct: 369 SLDIHLQNTDVFMAPVFMELVNSAILAKRGASASQNIAYEAVVLQANNMDLSFPRQLFVN 428
Query: 257 GEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGH 315
G+FVN G + +NP +ES ICSV+ A+ +DVD A AA+KAFE GEWS++SAR+RG
Sbjct: 429 GKFVNG-RGKPIVSVNPHDESVICSVESASIEDVDEAVKAAKKAFEEGEWSKISARERGA 487
Query: 316 LMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI 375
L+FKLADLMEQ+KEELAT+ESLDSGAVYTLALKTHVGMSI+TW+YFAGWCDKI G+T+PI
Sbjct: 488 LLFKLADLMEQHKEELATLESLDSGAVYTLALKTHVGMSIETWRYFAGWCDKIQGATVPI 547
Query: 376 AHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTAL 435
+HARPN N T T++EPIGVCGL+TPWNYPLMMLSWKMA CLAAGNTVVMKP++ S LTAL
Sbjct: 548 SHARPNRNLTMTRKEPIGVCGLVTPWNYPLMMLSWKMAACLAAGNTVVMKPAQTSALTAL 607
Query: 436 KLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL 495
K AELS +AG P GVINI+PG+G++TG AI H +RK+GFTGST G IM+S A+SNL
Sbjct: 608 KFAELSAKAGIPPGVINIVPGSGSITGNAIVNHHLVRKLGFTGSTEIGQMIMRSCADSNL 667
Query: 496 KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKV 555
KKVSLELGGKSPLVIF+D ++ +AVR++M VFFNKGENCI+AGRIFV+ I D FL++V
Sbjct: 668 KKVSLELGGKSPLVIFEDADMQQAVRLAMSSVFFNKGENCIAAGRIFVEERILDEFLDRV 727
Query: 556 VTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---- 596
V E KK+ NHKAHLDKL+++ EK EGARL+ GG+RLDRPG
Sbjct: 728 VAETKKIAIGDPLNRGTSHGPQNHKAHLDKLLEFVEKGVKEGARLVYGGRRLDRPGFYFE 787
Query: 597 -------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAM 625
D+D VI RAN+TEYGLASG+ T DI++A+
Sbjct: 788 PTIFADVRDGGFLATEESFGPIMIVSSFSSNDLDKVIARANATEYGLASGVLTKDISRAL 847
Query: 626 YFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
F +KID+GTVF+NTYNKTDVAAPFGGFK+SGFGKDL
Sbjct: 848 RFAEKIDAGTVFVNTYNKTDVAAPFGGFKRSGFGKDL 884
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91084907|ref|XP_969916.1| PREDICTED: similar to aldehyde dehydrogenase [Tribolium castaneum] gi|270008989|gb|EFA05437.1| hypothetical protein TcasGA2_TC015614 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/706 (53%), Positives = 485/706 (68%), Gaps = 89/706 (12%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLN----GIEVKVFASSMWEDANIEGTPVTVEGSD 68
I + G E+H+FIRG+DS PGAS + EV +F SS+W+ +G V +EG
Sbjct: 225 IDWGKTGPELHDFIRGMDSVPGASCRVKVNDKYHEVALFGSSVWKGGKPQGLDVGIEGGP 284
Query: 69 TPAILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDN 128
+H DGL+ TGSDG VNVKR+ ++
Sbjct: 285 N-GTIHEDGLILTGSDG-------------------------------TMVNVKRVKIEG 312
Query: 129 KMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVV 188
++ A N + + LTE E++ I ++ IW ILN+E+ ++TDFF SGAGSMDVV
Sbjct: 313 RVKLASNLLQTGQQVT-IELTEDEKSQIESMRGIWKSILNTEIEDETDFFASGAGSMDVV 371
Query: 189 RLIEEIKENLQIT-LQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDV 247
RL+EEIK+ L++ QNEDV ++ VF +F + + R G+ ++N++ +++ N + +
Sbjct: 372 RLVEEIKDLLKLEDYQNEDVFLNPVFTEFSLNAVLKKRGGETPKEINYKGVEIEANGLKI 431
Query: 248 SFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWS 306
P QLFINGEFV++ G ++ +NP E TIC VQ ++ DVD A AA+KAF EGEWS
Sbjct: 432 KVPCQLFINGEFVDAENGKTLPTVNPTTEETICQVQCGSAKDVDRAVQAAKKAFYEGEWS 491
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
++SARDRG L+FKLADLM Q++EELATIES+DSGAVYTLALKTHVGMSI+TW+YFAGW D
Sbjct: 492 KISARDRGQLLFKLADLMHQHREELATIESIDSGAVYTLALKTHVGMSIETWRYFAGWAD 551
Query: 367 KILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426
KI GSTIP++HARPN N +FTKREPIGVCGLITPWNYPLMMLSWKMA CLAAGNTV++KP
Sbjct: 552 KIHGSTIPVSHARPNKNLSFTKREPIGVCGLITPWNYPLMMLSWKMAACLAAGNTVIIKP 611
Query: 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
++V PLTALK AEL+V+AG P GVIN++PGTG+ TG+AI+ H ++RK+GFTGST G I
Sbjct: 612 AQVCPLTALKFAELAVKAGIPPGVINVVPGTGSTTGQAIATHPEVRKLGFTGSTGIGQVI 671
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
MKS AESNLKKVSLELGGKSPLVIF D +LDKAVR+ M VFFNKGENCI+AGR+FV+ +
Sbjct: 672 MKSCAESNLKKVSLELGGKSPLVIFADCDLDKAVRLGMQSVFFNKGENCIAAGRLFVEES 731
Query: 547 IYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKR 591
I+D F+ +VVTE KK+ NH+AHL KL+DY + EGA+L GG+R
Sbjct: 732 IHDEFIRRVVTETKKITIGDPLNKSTAHGPQNHQAHLTKLLDYIKMGVKEGAKLEYGGER 791
Query: 592 LDRP-----------------------------------GDVDAVIKRANSTEYGLASGI 616
L+R GD+D V+KRAN+TEYGLASG+
Sbjct: 792 LNRKGYFLQPTIFSHVEDHMYIAKEESFGPIMVISKFSNGDIDGVLKRANATEYGLASGV 851
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
FT D++KA+ F +K+++GTVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 852 FTRDLSKALKFAEKVEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 897
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340729606|ref|XP_003403089.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/701 (53%), Positives = 489/701 (69%), Gaps = 84/701 (11%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I + +++H+FIRGLDS+PGA T ++G EV++F S++W D + + ++ D
Sbjct: 234 IDWTKPAKKVHDFIRGLDSTPGAWTTIDGQEVRLFGSTLWTDDKLPEDRIALQVEDRLGY 293
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+H +GLL + +D Q+ +NVKR+ V NK I
Sbjct: 294 MHENGLLI------------KAIDNQF-------------------INVKRMKVGNKTIV 322
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIE 192
A FG++ + L TE E+ + LK+IW IL ++V EDTDFF GAGSMDVVRL+E
Sbjct: 323 ANKFGQQSEKIT-LEFTEEEQKNVETLKSIWENILKTDVDEDTDFFACGAGSMDVVRLVE 381
Query: 193 EIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQ 252
E+K+NL++TLQN DV M+ VF +F VI V+R S ++ ++++++ N M + FP Q
Sbjct: 382 EVKDNLKVTLQNVDVFMAPVFIEFANMVILVARGISASKEIKYDAVEIQANNMVLKFPRQ 441
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSAR 311
LFINGEFVN ++ +NP +ES ICSV+ A+ +DV+ A AA+KAFE GEWS++SAR
Sbjct: 442 LFINGEFVNG-SQEPLDTVNPHDESVICSVETASVEDVNKAVKAAKKAFEEGEWSKISAR 500
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+RG L+FKLADLME++KEELATIES+DSGAVYTLALKTH+GMSI+TW+YFAGWCDKI GS
Sbjct: 501 ERGALLFKLADLMEEHKEELATIESIDSGAVYTLALKTHIGMSIETWRYFAGWCDKIQGS 560
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIPI HARPN N TFT++EPIGVCGL+TPWNYPLMMLSWKMA CLAAGNTVVMKP++ SP
Sbjct: 561 TIPITHARPNRNLTFTRKEPIGVCGLVTPWNYPLMMLSWKMAACLAAGNTVVMKPAQTSP 620
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALK AEL++RAGFP GVINI+PG+G G AI +H +RK+GFTGST G +M A
Sbjct: 621 LTALKFAELTIRAGFPPGVINIVPGSGTEAGAAICEHPLVRKLGFTGSTQVGQSVMSCCA 680
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+SNLKKVSLELGGKSPLVIF+D +L +AV++ M VFFNKGENCI+AGR+FV+ I+D F
Sbjct: 681 KSNLKKVSLELGGKSPLVIFEDTDLQQAVKIGMSSVFFNKGENCIAAGRLFVEETIHDEF 740
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
++KVV E KK+ NH+AH++KL++Y ++ EGA+L+ GGKRL+RPG
Sbjct: 741 VKKVVEETKKISIGNPLDRSTAHGPQNHEAHMNKLLNYVKRGVQEGAKLVYGGKRLNRPG 800
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
++D +I RAN+TEYGLASGI T DI
Sbjct: 801 WYFEPTIFIDVKDDMYIANEESFGPIMVISKFSSKNMDEMIARANNTEYGLASGILTKDI 860
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+KA+ F +KI++GTVFINTYNKTDVAAPFGGFK SGFGKDL
Sbjct: 861 SKALKFAEKIEAGTVFINTYNKTDVAAPFGGFKMSGFGKDL 901
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|291233521|ref|XP_002736701.1| PREDICTED: aldehyde dehydrogenase 1 family, member L1-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/708 (52%), Positives = 493/708 (69%), Gaps = 86/708 (12%)
Query: 9 SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSD 68
S+ I +N E +HNFIRG D PGA + ++G ++ + SS+++ ++ EG+ + + G
Sbjct: 230 SVAEINWNQPAEVLHNFIRGNDKQPGAWSTVDGQQLTFYGSSLFDGSDPEGSALEIPGMS 289
Query: 69 TPAILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLV-D 127
P I+H DGL+ G+DG+K+ NVK LL D
Sbjct: 290 KPGIIHKDGLVLYGNDGKKL-------------------------------NVKTLLCED 318
Query: 128 NKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGIL-NSEVSEDTDFFQSGAGSMD 186
KM+ A +G+ ++ + + LT EEA+ +K +WAGIL N ++ +TDFF+ GAGSMD
Sbjct: 319 GKMVQASRYGQAAEAMEKVELTPEEEAMAAAIKAVWAGILSNDNITAETDFFKMGAGSMD 378
Query: 187 VVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKM 245
V RL+EE+++ I LQNEDV M++ + +F V+ R G+ + +++++++VN M
Sbjct: 379 VARLVEEVQQKCNGIKLQNEDVYMATTYDEFVQLVVRKGR-GEGEEEFTYDAVEMDVNNM 437
Query: 246 DVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GE 304
++ FP+QLFIN +FV++ G + + INP +ES IC V + DVDIA AA+ AFE GE
Sbjct: 438 NLKFPHQLFINNKFVDAHDGKTFDTINPCDESVICKVAKGSGPDVDIAVKAAKAAFEEGE 497
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W +++ARDRG LM++LAD+M+++KEELAT+ES+DSGAVYTLALKTHVGMSIDT++YFAGW
Sbjct: 498 WGKMNARDRGTLMYRLADIMDEHKEELATLESIDSGAVYTLALKTHVGMSIDTFRYFAGW 557
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
CDKI G+TIPI +ARPN N TFTKREP+GVC ++ PWNYPLMML+WKMA C+AAGNTVV+
Sbjct: 558 CDKIQGTTIPINNARPNRNLTFTKREPLGVCAIVIPWNYPLMMLAWKMAACIAAGNTVVL 617
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KP++V+PLTALK AELSV+AGFP GVINILPG+GAV G+A+S H IRK+GFTGST G
Sbjct: 618 KPAQVTPLTALKFAELSVKAGFPPGVINILPGSGAVVGQAMSDHPDIRKLGFTGSTPIGK 677
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
IMKS A +NLKKVSLELGGKSPL+IF+D +LDKAVR G VFFNKGENCI+AGR+FV+
Sbjct: 678 HIMKSCALANLKKVSLELGGKSPLLIFNDCDLDKAVRNGCGAVFFNKGENCIAAGRLFVE 737
Query: 545 SNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGG 589
+I+D F+EKV+ E+KKM NH+AH++KL++YC+ EGA L GG
Sbjct: 738 ESIHDEFVEKVIEEIKKMKIGDPLDRSTSHGPQNHRAHMEKLLEYCDIGVKEGATLAYGG 797
Query: 590 KRLDRP-----------------------------------GDVDAVIKRANSTEYGLAS 614
K++DRP GDVD V+K AN+TEYGLAS
Sbjct: 798 KQVDRPGLFLMPTVFTNVEDHMMLAKEESFGPIMIISKFKNGDVDNVLKSANATEYGLAS 857
Query: 615 GIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
G+FT D++KA+Y DK+D+GTVF+N YNKTDVAAPFGGFKQSGFGKDL
Sbjct: 858 GVFTKDMSKALYCADKLDAGTVFMNCYNKTDVAAPFGGFKQSGFGKDL 905
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|307186303|gb|EFN71966.1| 10-formyltetrahydrofolate dehydrogenase [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/701 (54%), Positives = 478/701 (68%), Gaps = 84/701 (11%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I + +E+HNFIRGLDS+PGA T+LN EV++F SS+W + + + V+ + I
Sbjct: 215 IDWTKPAKEVHNFIRGLDSTPGAWTILNNEEVRLFGSSLWSNGKLPEVQMEVDLEERKGI 274
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+H DGLL DGQ V NV+R+ + K IH
Sbjct: 275 VHSDGLLIKAGDGQCV-------------------------------NVERIKIGTKTIH 303
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIE 192
+ +G+ DS K + TE E I+ VL IW IL +V +TDFF SGA SMDVVRLIE
Sbjct: 304 SSKYGQTSDS-KIVEFTEEELKIVNVLHRIWTDILKIDVDNETDFFASGASSMDVVRLIE 362
Query: 193 EIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQ 252
E+K+ + ++LQN DV M+ VF++F V+ +R ++ ++++ + N M + FP Q
Sbjct: 363 ELKDAVGVSLQNTDVFMAPVFKEFATTVVLAARGNVAVKEIKYDAVVVEANNMTLRFPKQ 422
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSAR 311
LFINGEFVN G ++ INP +ES ICSV+ A ++VD A AA+KAFE GEW ++SAR
Sbjct: 423 LFINGEFVNG-HGKPVDAINPHDESVICSVESATVENVDRAVKAAKKAFEEGEWGKISAR 481
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+RG L+FKLA+LME++KEELAT+ES+DSGAVYTLALKTHVGMSI+TW+YFAGWCDKI GS
Sbjct: 482 ERGALLFKLANLMEEHKEELATLESIDSGAVYTLALKTHVGMSIETWRYFAGWCDKIHGS 541
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIPI+HARPN N TFT+REPIGVCGL+TPWNYPLMMLSWKMA CLAAGNTVVMKP++ SP
Sbjct: 542 TIPISHARPNRNLTFTRREPIGVCGLVTPWNYPLMMLSWKMAACLAAGNTVVMKPAQASP 601
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALK AELSVRAG P GVINI+ G G+ G AI H +RK+GFTGST G IMKS A
Sbjct: 602 LTALKFAELSVRAGIPPGVINIVCGFGSTVGNAIVGHPLVRKLGFTGSTQIGQTIMKSCA 661
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+SNLKKVSLELGGKSPLVIF+D ++ +AVR+ M VFFNKGENCI+AGR+FV+ I+DAF
Sbjct: 662 DSNLKKVSLELGGKSPLVIFEDADMQQAVRIGMSSVFFNKGENCIAAGRLFVEETIHDAF 721
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
++ VV EVKK+ NHKAHL KL+ + + EGA L+ GGKRL+RPG
Sbjct: 722 VKHVVEEVKKISIGNPLDRSTAHGPQNHKAHLGKLLQFVQIGIEEGATLVYGGKRLNRPG 781
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
++D +I RAN+TE+GLASGI T DI
Sbjct: 782 WYFEPTVFTDVKDNMYIAKEESFGPIMVISKFSSKNIDEMIARANNTEFGLASGILTKDI 841
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
++A+ F +KI++GTVFINTYNKTDVAAPFGGFK SGFGKDL
Sbjct: 842 SRALRFAEKIEAGTVFINTYNKTDVAAPFGGFKMSGFGKDL 882
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340729604|ref|XP_003403088.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/701 (53%), Positives = 489/701 (69%), Gaps = 84/701 (11%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I + +++H+FIRGLDS+PGA T ++G EV++F S++W D + + ++ D
Sbjct: 217 IDWTKPAKKVHDFIRGLDSTPGAWTTIDGQEVRLFGSTLWTDDKLPEDRIALQVEDRLGY 276
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+H +GLL + +D Q+ +NVKR+ V NK I
Sbjct: 277 MHENGLLI------------KAIDNQF-------------------INVKRMKVGNKTIV 305
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIE 192
A FG++ + L TE E+ + LK+IW IL ++V EDTDFF GAGSMDVVRL+E
Sbjct: 306 ANKFGQQSEKIT-LEFTEEEQKNVETLKSIWENILKTDVDEDTDFFACGAGSMDVVRLVE 364
Query: 193 EIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQ 252
E+K+NL++TLQN DV M+ VF +F VI V+R S ++ ++++++ N M + FP Q
Sbjct: 365 EVKDNLKVTLQNVDVFMAPVFIEFANMVILVARGISASKEIKYDAVEIQANNMVLKFPRQ 424
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSAR 311
LFINGEFVN ++ +NP +ES ICSV+ A+ +DV+ A AA+KAFE GEWS++SAR
Sbjct: 425 LFINGEFVNG-SQEPLDTVNPHDESVICSVETASVEDVNKAVKAAKKAFEEGEWSKISAR 483
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+RG L+FKLADLME++KEELATIES+DSGAVYTLALKTH+GMSI+TW+YFAGWCDKI GS
Sbjct: 484 ERGALLFKLADLMEEHKEELATIESIDSGAVYTLALKTHIGMSIETWRYFAGWCDKIQGS 543
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIPI HARPN N TFT++EPIGVCGL+TPWNYPLMMLSWKMA CLAAGNTVVMKP++ SP
Sbjct: 544 TIPITHARPNRNLTFTRKEPIGVCGLVTPWNYPLMMLSWKMAACLAAGNTVVMKPAQTSP 603
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALK AEL++RAGFP GVINI+PG+G G AI +H +RK+GFTGST G +M A
Sbjct: 604 LTALKFAELTIRAGFPPGVINIVPGSGTEAGAAICEHPLVRKLGFTGSTQVGQSVMSCCA 663
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+SNLKKVSLELGGKSPLVIF+D +L +AV++ M VFFNKGENCI+AGR+FV+ I+D F
Sbjct: 664 KSNLKKVSLELGGKSPLVIFEDTDLQQAVKIGMSSVFFNKGENCIAAGRLFVEETIHDEF 723
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
++KVV E KK+ NH+AH++KL++Y ++ EGA+L+ GGKRL+RPG
Sbjct: 724 VKKVVEETKKISIGNPLDRSTAHGPQNHEAHMNKLLNYVKRGVQEGAKLVYGGKRLNRPG 783
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
++D +I RAN+TEYGLASGI T DI
Sbjct: 784 WYFEPTIFIDVKDDMYIANEESFGPIMVISKFSSKNMDEMIARANNTEYGLASGILTKDI 843
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+KA+ F +KI++GTVFINTYNKTDVAAPFGGFK SGFGKDL
Sbjct: 844 SKALKFAEKIEAGTVFINTYNKTDVAAPFGGFKMSGFGKDL 884
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380020652|ref|XP_003694195.1| PREDICTED: LOW QUALITY PROTEIN: cytosolic 10-formyltetrahydrofolate dehydrogenase-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/701 (55%), Positives = 483/701 (68%), Gaps = 84/701 (11%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I + +++H+FIR LDS+PGA T+++G EV++F S++W I + V D I
Sbjct: 215 INWTKSAKQVHDFIRSLDSTPGAWTIIDGEEVRLFGSTLWSGDQIPEHEIEVNVEDRLGI 274
Query: 73 LHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIH 132
+H DGLL + VD + VNV+R+ V + I
Sbjct: 275 IHKDGLLI------------KAVDNHF-------------------VNVERMKVGTRTIL 303
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIE 192
A FG +K + TE E+ II LK IW GILN +V+EDTDFF GAGSMDVVRL+E
Sbjct: 304 ASKFG-QKSEDTTIEFTEEEQKIIESLKRIWEGILNMDVNEDTDFFACGAGSMDVVRLVE 362
Query: 193 EIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQ 252
E+K+NL++TLQN DV M+ VF F KV+ +R S ++ ++++K+ N M + FP Q
Sbjct: 363 EVKDNLEVTLQNIDVFMAPVFIQFVNKVVLTARGISASKEIKYDAVKVETNNMTLKFPRQ 422
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLSAR 311
LFINGEFVN G+ ++ INP +E+ ICSV+ DDVD A AA+KAF EGEWS++SAR
Sbjct: 423 LFINGEFVNG-HGNPIDTINPHDETIICSVETGTVDDVDKAVKAAKKAFEEGEWSKISAR 481
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+RG L+FKLADLMEQ+KEELATIES+DSGAVYTLALKTH+GMSI+TW+YFAGWCDKI GS
Sbjct: 482 ERGALLFKLADLMEQHKEELATIESIDSGAVYTLALKTHIGMSIETWRYFAGWCDKIQGS 541
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIPIAHARPN N T T++EPIGVCGL+TPWNYPLMMLSWKMA CLAAGNTVVMKP++ SP
Sbjct: 542 TIPIAHARPNRNLTXTRKEPIGVCGLVTPWNYPLMMLSWKMAACLAAGNTVVMKPAQASP 601
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALK AEL RAGFP GV+NI+PG G TG AI +HL IRK+GFTGST G IM+S A
Sbjct: 602 LTALKFAELIARAGFPPGVVNIVPGNGTETGNAICEHLLIRKLGFTGSTQIGQSIMRSCA 661
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
SNLKKVSLELGGKSPLVIF+D +L +A+++++ VFFNKGENCI+AGR+FV+ I+D F
Sbjct: 662 NSNLKKVSLELGGKSPLVIFEDADLQQAIKIAISSVFFNKGENCIAAGRLFVEETIHDEF 721
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
L ++V E KK+ NH+AHL+KL+ + E EGA+L+ GGKRLDRPG
Sbjct: 722 LRRIVEETKKISIGNPLDRSTAHGPQNHEAHLNKLLKFVECGVKEGAKLIYGGKRLDRPG 781
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
+VD +I RAN TEYGLASGI T DI
Sbjct: 782 WYFEPTIFTNVKDDMYIAKEESFGPIMIISKFSSKNVDDMIARANDTEYGLASGILTRDI 841
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
++A+ F +KI++GTVFINTYNKTDVAAPFGGFK SGFGKDL
Sbjct: 842 SRALRFAEKIEAGTVFINTYNKTDVAAPFGGFKMSGFGKDL 882
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 709 | ||||||
| UNIPROTKB|E2RC62 | 923 | ALDH1L2 "Uncharacterized prote | 0.795 | 0.611 | 0.549 | 2.4e-177 | |
| FB|FBgn0032945 | 913 | CG8665 [Drosophila melanogaste | 0.805 | 0.625 | 0.517 | 4.7e-172 | |
| UNIPROTKB|E1BMG9 | 902 | ALDH1L1 "Uncharacterized prote | 0.803 | 0.631 | 0.538 | 4.2e-171 | |
| UNIPROTKB|O75891 | 902 | ALDH1L1 "Cytosolic 10-formylte | 0.811 | 0.637 | 0.537 | 6.9e-171 | |
| UNIPROTKB|E1BDG9 | 911 | ALDH1L2 "Uncharacterized prote | 0.812 | 0.632 | 0.537 | 2.3e-170 | |
| RGD|621294 | 902 | Aldh1l1 "aldehyde dehydrogenas | 0.811 | 0.637 | 0.530 | 1.3e-169 | |
| MGI|MGI:1340024 | 902 | Aldh1l1 "aldehyde dehydrogenas | 0.811 | 0.637 | 0.529 | 1.9e-168 | |
| WB|WBGene00000109 | 908 | alh-3 [Caenorhabditis elegans | 0.815 | 0.636 | 0.510 | 2.4e-166 | |
| UNIPROTKB|F1P130 | 909 | LOC100857360 "Uncharacterized | 0.854 | 0.666 | 0.526 | 3.1e-166 | |
| ZFIN|ZDB-GENE-100519-4 | 904 | aldh1l1 "aldehyde dehydrogenas | 0.918 | 0.720 | 0.492 | 7.9e-165 |
| UNIPROTKB|E2RC62 ALDH1L2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1605 (570.0 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 332/604 (54%), Positives = 422/604 (69%)
Query: 127 DNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGIL-NSEVSED-TDFFQSGAGS 184
D +MI A + +++ + LT E + +K IWAGIL N V ED TDFF+SGA S
Sbjct: 317 DGRMIPASQYFSAGETSV-VELTAEEVKVAGTIKVIWAGILSNVPVIEDSTDFFKSGASS 375
Query: 185 MDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVN 243
MDVVRL+EEI++ + LQNEDV M++ F DF KV+ R D +L + + VN
Sbjct: 376 MDVVRLVEEIRQRCGGLQLQNEDVYMATKFEDFIQKVVRKLRGEDQEVELVVDYVSKEVN 435
Query: 244 KMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE- 302
+M V P Q FING+F ++ G + + INP + STIC V A+ DVD A AA+ AFE
Sbjct: 436 EMTVKMPYQCFINGQFTDANDGKTYDTINPTDGSTICKVSYASLVDVDKAVAAAKDAFEK 495
Query: 303 GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFA 362
GEW R++AR+RG LM++LADL+E+N+EELATIE+LDSGAVYTLALKTH+GMS+ T++YFA
Sbjct: 496 GEWGRMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFA 555
Query: 363 GWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422
GWCDKI GSTIPI ARPN N TFTK+EP+GVC +I PWNYPLMML+WK A CLAAGNT+
Sbjct: 556 GWCDKIQGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTL 615
Query: 423 VMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVT 482
V+KP++V+PLTALK AELS +AGFPKGVINI+PG+G V G+ +S+H IRK+GFTGST
Sbjct: 616 VLKPAQVTPLTALKFAELSSKAGFPKGVINIIPGSGGVAGQRLSEHPHIRKLGFTGSTAI 675
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIF 542
G +IMKS A SNLKKVSLELGGKSPL+IF+D LDKAVRM MG VFFNKGENCI+AGR+F
Sbjct: 676 GKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLF 735
Query: 543 VDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLI 587
V+ +I+D F+ KVV E+KKM NH+AHL+KL+ YCE EGA L+
Sbjct: 736 VEESIHDEFVTKVVEEIKKMKIGDPLDRSTDHGPQNHQAHLEKLLQYCEAGVKEGATLVY 795
Query: 588 GGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF-INTYNKTDV 646
GG+++ RPG + + +FT D+ MY + G + I+ + D+
Sbjct: 796 GGRQVCRPG-------------FFMEPTVFT-DVEDHMYLAKEESFGPIMVISKFQNGDI 841
Query: 647 AAPFGGFKQSGFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGF 701
+ +G DINKAMY +K+++GTVF+NTYNKTDVAAPFGG KQSGF
Sbjct: 842 DGVLQRANNTEYGLASGVFTRDINKAMYVSEKLEAGTVFVNTYNKTDVAAPFGGVKQSGF 901
Query: 702 GKDL 705
GKDL
Sbjct: 902 GKDL 905
|
|
| FB|FBgn0032945 CG8665 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1574 (559.1 bits), Expect = 4.7e-172, Sum P(2) = 4.7e-172
Identities = 318/614 (51%), Positives = 420/614 (68%)
Query: 119 VNVKRLLVDNKMIHACNFGKEKDSAKDLVLTE-SEEAIIP--VLKTIWAGILNSEVSEDT 175
VN++R+ K+I A + K+ A+D +T+ SE+ ++ +L IW IL +V T
Sbjct: 298 VNIRRIKRGTKVISASEWFKQ---AEDQSITDFSEDELVKRSLLAGIWKAILKEDVESST 354
Query: 176 DFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDV---SNQ 232
DFF SGAGSMDVVRL+EE+KE + LQNE V M+ VF +F+ ++ RQG + Q
Sbjct: 355 DFFASGAGSMDVVRLVEEVKEAFDVPLQNEQVFMAPVFEEFFSLLVRFLRQGSAGFGNQQ 414
Query: 233 LNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDI 292
L+ E+ L NK ++ P QLFINGEFV++ ++E +NP NE +C V A++ DVD
Sbjct: 415 LDFEAFTLKANKREIRVPTQLFINGEFVDAEAQRTLEIVNPTNEEVLCKVACASATDVDK 474
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVG 352
A AA AF G W +++ R RG LM LADLME+NKEELATIES+DSGAVYTLALKTHVG
Sbjct: 475 AVRAAHSAFYGSWRQITPRQRGQLMLNLADLMERNKEELATIESVDSGAVYTLALKTHVG 534
Query: 353 MSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412
MSI+ W+YFAGWCDKI G+TIP+ ARPN+ TFT++EPIGVCGLITPWNYPLMMLSWKM
Sbjct: 535 MSIEAWRYFAGWCDKIQGNTIPVNPARPNNVLTFTRKEPIGVCGLITPWNYPLMMLSWKM 594
Query: 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIR 472
A C+AAGNT ++KP++ PLTALK AEL+VRAGFP GVIN+LPG G+ G+A++ H +R
Sbjct: 595 AACIAAGNTCLIKPAQTCPLTALKFAELTVRAGFPPGVINVLPGKGSDAGQAVADHELVR 654
Query: 473 KVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKG 532
K+GFTGST G IMKS A+SNLKK SLELGGKSPL+IF D ++DKAV+ M VFFNKG
Sbjct: 655 KLGFTGSTPIGKHIMKSCADSNLKKCSLELGGKSPLIIFADCDMDKAVKHGMSSVFFNKG 714
Query: 533 ENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEK 577
ENCI+AGR+FV+ I+D F+ +V+ +++ M NHKAH DKL+++C +
Sbjct: 715 ENCIAAGRLFVEDRIHDEFIRRVLKDLRTMTIGDPLDRSTAHGPQNHKAHFDKLLEFCRR 774
Query: 578 AKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
EGA+L+ GG R+ P N Y +FT+ + M+ + G +
Sbjct: 775 GVDEGAKLVYGGCRV--P----------NLKGYFFTPTVFTN-VTDDMFIAQEESFGPIM 821
Query: 638 I-NTYNKTDVAAPFGGFKQSGFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDVAA 691
I + +N +D+ + ++ +G DI KA+ F D+I++GTVF+N YNKTDVAA
Sbjct: 822 IISKFNGSDIDSLMQRANRTEYGLASGVFTKDIGKALNFADRIEAGTVFVNVYNKTDVAA 881
Query: 692 PFGGFKQSGFGKDL 705
PFGGFKQSG+GKDL
Sbjct: 882 PFGGFKQSGYGKDL 895
|
|
| UNIPROTKB|E1BMG9 ALDH1L1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1573 (558.8 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 329/611 (53%), Positives = 423/611 (69%)
Query: 121 VKRL-LVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDF 177
VK + L D KMI A +F ++ +S+ L LTE E ++ W IL S EV E TDF
Sbjct: 289 VKNIQLEDGKMIPAAHFFEKVESSA-LELTEEELGTAEAVRGAWKRILPSVPEVDESTDF 347
Query: 178 FQSGAGSMDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHE 236
F+SGA S+DVVRL+EE+KE + L+NEDV M++ F DF ++ R GD + +
Sbjct: 348 FKSGAASVDVVRLVEEVKELCDGLELENEDVYMATTFGDFIQLLVRRLRGGDKETECAID 407
Query: 237 SIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALA 296
++ VNK+ + P+QLFI G FV++ GG + E INP + S +C V +A DVD A A
Sbjct: 408 YVEKAVNKLTLRMPHQLFIGGTFVDAEGGKTYETINPTDGSALCQVSLAQVSDVDKAVAA 467
Query: 297 AEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSI 355
A+ AFE G W ++SARDRG L+++LA+LMEQ++EELATIE+LD+GAVYTLALKTHVGMSI
Sbjct: 468 AKDAFEIGGWGKISARDRGRLLYRLAELMEQHQEELATIEALDAGAVYTLALKTHVGMSI 527
Query: 356 DTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPC 415
T++YFAGWCDKI GSTIPI ARPN N T T+REPIGVCG+I PWNYPLMMLSWK A C
Sbjct: 528 QTFRYFAGWCDKIQGSTIPINQARPNRNLTMTRREPIGVCGIIIPWNYPLMMLSWKTAAC 587
Query: 416 LAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVG 475
LAAGNTVV+KP++V+PLTALK AEL+++AG PKGV+N+LPG+G++ G+ +S H +RK+G
Sbjct: 588 LAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIG 647
Query: 476 FTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENC 535
FTGST G IMKS A SN+KKVSLELGGKSPL+IF D +L KAV+M M VFFNKGENC
Sbjct: 648 FTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLLIFADCDLGKAVQMGMSSVFFNKGENC 707
Query: 536 ISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKS 580
I+AGR+FV+ +I+D F+ +VV EV KM NH AHL KL++YC++
Sbjct: 708 IAAGRLFVEDSIHDQFVRRVVEEVGKMKIGNPLDRDTNHGPQNHLAHLQKLLEYCQRGVE 767
Query: 581 EGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI-N 639
EGA L+ GGK++ RPG + +FT D+ M+ + G + I +
Sbjct: 768 EGATLVCGGKQVPRPG-------------FFFEPTVFT-DVQDHMFIAREESFGPIMIIS 813
Query: 640 TYNKTDVAAPFGGFKQSGFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDVAAPFG 694
+ DV A + FG DINKA+Y DK+++GTVF+NTYNKTDVAAPFG
Sbjct: 814 RFADGDVDAVLTRANATEFGLASGVFTRDINKALYVSDKLEAGTVFVNTYNKTDVAAPFG 873
Query: 695 GFKQSGFGKDL 705
GFKQSGFGKDL
Sbjct: 874 GFKQSGFGKDL 884
|
|
| UNIPROTKB|O75891 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1582 (562.0 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 331/616 (53%), Positives = 424/616 (68%)
Query: 116 DMKVNVKRL-LVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVS 172
D + VK + L D KMI A NF K S+ L LTE+E ++++W IL EV
Sbjct: 284 DKMLLVKNIQLEDGKMILASNFFKGAASSV-LELTEAELVTAEAVRSVWQRILPKVLEVE 342
Query: 173 EDTDFFQSGAGSMDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSN 231
+ TDFF+SGA S+DVVRL+EE+KE + L+NEDV M+S F DF ++ R D
Sbjct: 343 DSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDDEEG 402
Query: 232 QLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVD 291
+ + + +++ VNK V P+QLFI GEFV++ G + E INP + S IC V +A DVD
Sbjct: 403 ECSIDYVEMAVNKRTVRMPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVD 462
Query: 292 IAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350
A AA+ AFE G W ++SARDRG LM++LADLMEQ++EELATIE+LD+GAVYTLALKTH
Sbjct: 463 KAVAAAKDAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTH 522
Query: 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410
VGMSI T++YFAGWCDKI GSTIPI ARPN N T T++EP+GVCG+I PWNYPLMMLSW
Sbjct: 523 VGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582
Query: 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLK 470
K A CLAAGNTVV+KP++V+PLTALK AEL+++AG PKGV+N+LPG+G++ G+ +S H
Sbjct: 583 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPD 642
Query: 471 IRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530
+RK+GFTGST G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFN
Sbjct: 643 VRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFN 702
Query: 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575
KGENCI+AGR+FV+ +I+D F+ +VV EV+KM NH AHL KL++YC
Sbjct: 703 KGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYC 762
Query: 576 EKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGT 635
+ EGA L+ GG ++ RPG + +FT D+ M+ + G
Sbjct: 763 QHGVKEGATLVCGGNQVPRPG-------------FFFEPTVFT-DVEDHMFIAKEESFGP 808
Query: 636 VFI-NTYNKTDVAAPFGGFKQSGFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDV 689
V I + + D+ A + FG DINKA+Y DK+ +GTVF+NTYNKTDV
Sbjct: 809 VMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDV 868
Query: 690 AAPFGGFKQSGFGKDL 705
AAPFGGFKQSGFGKDL
Sbjct: 869 AAPFGGFKQSGFGKDL 884
|
|
| UNIPROTKB|E1BDG9 ALDH1L2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1536 (545.8 bits), Expect = 2.3e-170, Sum P(2) = 2.3e-170
Identities = 319/594 (53%), Positives = 411/594 (69%)
Query: 127 DNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGS 184
D KMI A + + + + LT E + +K IWAGIL++ + + TDFF+SGA S
Sbjct: 303 DGKMIPASQYFSSGEMSM-VELTAEEVKVAETIKVIWAGILSNVPAIEDSTDFFKSGASS 361
Query: 185 MDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVN 243
MDV RL+EEI++ + LQNEDV M++ F DF KV+ R D +L + + +N
Sbjct: 362 MDVARLVEEIRQKCGGLQLQNEDVYMATKFEDFIQKVVRKLRGEDQEAELVVDYVSKEIN 421
Query: 244 KMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE- 302
M V P Q FING+F ++ G + + INP + STIC V A+ DVD A AA+ AFE
Sbjct: 422 DMTVKMPYQCFINGQFTDAEDGQTYDTINPTDGSTICKVSYASLVDVDKAVAAAKDAFEN 481
Query: 303 GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFA 362
GEW R++ARDRG LM++LADLME+ +EELATIE+LDSGAVYTLALKTH+GMS+ T++YFA
Sbjct: 482 GEWGRMNARDRGRLMYRLADLMEEKQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFA 541
Query: 363 GWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422
GWCDKI GSTIPI ARPN N TFTK+EP+GVC +I PWNYPLMML+WK A CLAAGNT+
Sbjct: 542 GWCDKIQGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTL 601
Query: 423 VMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVT 482
V+KP++V+PLTALK AELSV+AGFPKGVINI+PG+G V G+ +S+H IRK+GFTGST+
Sbjct: 602 VLKPAQVTPLTALKFAELSVKAGFPKGVINIIPGSGGVVGQHLSEHPDIRKLGFTGSTLI 661
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRM--SMGGVFFNKGENCISAGR 540
G +IMKS A SNLKKVSLELGGKSPL+IF D LDKAVRM MG VFFNKGENCI+AGR
Sbjct: 662 GKQIMKSCAMSNLKKVSLELGGKSPLIIFSDCELDKAVRMPKGMGAVFFNKGENCIAAGR 721
Query: 541 IFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYC-EKAKSEGARLLIGGKRLDRPGDVD 599
+FV+ +I+D F+ ++V E+KKM LD+ D+ + K+ +LL + + G
Sbjct: 722 LFVEESIHDEFVTRMVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCEAGVKEG-AT 780
Query: 600 AVI--KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF-INTYNKTDVAAPFGGFKQS 656
V ++ + + +FT D+ MY + G + I+ + DV +
Sbjct: 781 LVYGGRQVQRPGFFMEPTVFT-DVEDHMYLAKEESFGPIMVISKFQNGDVDGVLQRANNT 839
Query: 657 GFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
+G DINKAMY +K+++GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 840 EYGLASGVFTRDINKAMYVSEKLEAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 893
|
|
| RGD|621294 Aldh1l1 "aldehyde dehydrogenase 1 family, member L1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1567 (556.7 bits), Expect = 1.3e-169, Sum P(2) = 1.3e-169
Identities = 327/616 (53%), Positives = 426/616 (69%)
Query: 116 DMKVNVKRL-LVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVS 172
D + VK + L D KM+ A F K S+ DL LTE+E A +++ W IL + EV
Sbjct: 284 DRMLLVKNIQLEDGKMMPASQFFKGSASS-DLELTEAELATAEAVRSSWMRILPNVPEVE 342
Query: 173 EDTDFFQSGAGSMDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSN 231
+ TDFF+SGA S+DVVRL+EE+KE + L+NEDV M++ FR F ++ R D +
Sbjct: 343 DSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMATTFRGFIQLLVRKLRGEDDES 402
Query: 232 QLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVD 291
+ ++ VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD
Sbjct: 403 ECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVD 462
Query: 292 IAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350
A AA++AFE G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTH
Sbjct: 463 KAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTH 522
Query: 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410
VGMSI T++YFAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSW
Sbjct: 523 VGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 582
Query: 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLK 470
K A CLAAGNTVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H
Sbjct: 583 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPD 642
Query: 471 IRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530
+RK+GFTGST G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFN
Sbjct: 643 VRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFN 702
Query: 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575
KGENCI+AGR+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC
Sbjct: 703 KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYC 762
Query: 576 EKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGT 635
++ EGA L+ GG ++ RPG + +FT D+ MY + G
Sbjct: 763 QRGVKEGATLVCGGNQVPRPG-------------FFFQPTVFT-DVEDHMYIAKEESFGP 808
Query: 636 VFI-NTYNKTDVAAPFGGFKQSGFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDV 689
+ I + + DV A + FG DINKA+Y DK+ +GTVFINTYNKTDV
Sbjct: 809 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDV 868
Query: 690 AAPFGGFKQSGFGKDL 705
AAPFGGFKQSGFGKDL
Sbjct: 869 AAPFGGFKQSGFGKDL 884
|
|
| MGI|MGI:1340024 Aldh1l1 "aldehyde dehydrogenase 1 family, member L1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1557 (553.2 bits), Expect = 1.9e-168, Sum P(2) = 1.9e-168
Identities = 326/616 (52%), Positives = 422/616 (68%)
Query: 116 DMKVNVKRL-LVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVS 172
D + VK + L D KM+ A F K S+ L LTE E A +++ W IL + EV
Sbjct: 284 DRMLLVKNIQLEDGKMMPASQFFKGSASSA-LELTEEELATAEAVRSSWMRILPNVPEVE 342
Query: 173 EDTDFFQSGAGSMDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSN 231
+ TDFF+SGA S+DVVRL+EE+KE + L+NEDV M++ F DF ++ R D +
Sbjct: 343 DSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMATTFGDFIQLLVRKLRGEDGES 402
Query: 232 QLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVD 291
+ ++ V K+ + P QLFI GEFV++ G + INP + S IC V +A DVD
Sbjct: 403 ECVINYVEKAVKKLTLQMPYQLFIGGEFVDAEGAKTYSTINPTDGSVICQVSLAQVSDVD 462
Query: 292 IAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350
A AA++AFE G W +++ARDRG L+++LADLMEQ++EELATIE+LD+GAVYTLALKTH
Sbjct: 463 KAVAAAKEAFENGLWGKINARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTH 522
Query: 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410
VGMSI T++YFAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSW
Sbjct: 523 VGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 582
Query: 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLK 470
K A CLAAGNTVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H
Sbjct: 583 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPD 642
Query: 471 IRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530
+RK+GFTGST G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFN
Sbjct: 643 VRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFN 702
Query: 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575
KGENCI+AGR+FV+ +I+D F++KVV EV KM NH+AHL KL++YC
Sbjct: 703 KGENCIAAGRLFVEDSIHDQFVQKVVEEVGKMKIGNPLDRDTNHGPQNHEAHLRKLVEYC 762
Query: 576 EKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGT 635
++ EGA L+ GG ++ RPG + +FT D+ MY + G
Sbjct: 763 QRGVKEGATLVCGGNQVPRPG-------------FFFQPTVFT-DVEDHMYIAKEESFGP 808
Query: 636 VFI-NTYNKTDVAAPFGGFKQSGFGK-----DLDINKAMYFVDKIDSGTVFINTYNKTDV 689
+ I + + DV A + FG DINKA+Y DK+ +GTVF+NTYNKTDV
Sbjct: 809 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDV 868
Query: 690 AAPFGGFKQSGFGKDL 705
AAPFGGFKQSGFGKDL
Sbjct: 869 AAPFGGFKQSGFGKDL 884
|
|
| WB|WBGene00000109 alh-3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1505 (534.8 bits), Expect = 2.4e-166, Sum P(2) = 2.4e-166
Identities = 308/603 (51%), Positives = 411/603 (68%)
Query: 119 VNVKRLLVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDTDFF 178
V V + + K + A +G+ D ++LVLT+ E++ + LK IW GIL ++VS DTDFF
Sbjct: 297 VIVDTVKIGTKTVPASKYGQGADQVQELVLTDEEKSTVAKLKKIWTGILKTQVSSDTDFF 356
Query: 179 QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESI 238
+SGA S DV RL+EEIK N L++ + + I ++ + +G+ + ++ I
Sbjct: 357 ESGASSADVTRLVEEIKFNTGAELESGQIYAGPTLGE-NIDIVIRNLRGEGGISVTYDPI 415
Query: 239 KLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAE 298
LNVN M++ FP+ FI+G+FV S G + + INPA E IC + +A DVD A AA+
Sbjct: 416 VLNVNNMELKFPHDQFIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAK 475
Query: 299 KAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDT 357
KAFE GEW ++SAR+RG ++KLA+LME++KEELAT+ESLD+GAVYTLALKTHVGMSID
Sbjct: 476 KAFERGEWRQMSARERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDV 535
Query: 358 WKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLA 417
W+YFAGWCDKI G TIPI++ARPN N T REPIGV GLITPWNYPLMMLSWKMA CLA
Sbjct: 536 WRYFAGWCDKIQGKTIPISNARPNKNLCLTLREPIGVVGLITPWNYPLMMLSWKMAACLA 595
Query: 418 AGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFT 477
AGNTVV KP++V+PLTALK AELSV AG P GVINI+ G+G++ G ++ H +RK+GFT
Sbjct: 596 AGNTVVHKPAQVTPLTALKFAELSVLAGIPPGVINIVTGSGSLVGNRLTAHPDVRKIGFT 655
Query: 478 GSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCIS 537
GST G +M+S A+SN+KKVSLELGGKSPL+IF D +L+KAV+ + G VFFNKGENCI+
Sbjct: 656 GSTEIGATVMESCAKSNIKKVSLELGGKSPLIIFADADLEKAVKQACGAVFFNKGENCIA 715
Query: 538 AGRIFVDSNIYDAFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEG 582
AGR+F+ +I+D F++K+V E K+ NH AHL+KL++Y EKA + G
Sbjct: 716 AGRVFIAKSIHDDFVKKLVEEAKQYQIGDPLDRSTAHGPQNHLAHLNKLVEYVEKAVAGG 775
Query: 583 ARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642
A++ +GGKRL+R G +N + A+ + + D D V + N
Sbjct: 776 AKVEVGGKRLEREGLYFPPTILSNIDDENFAASEESFGPIMCVSSFDDDDIEDV-LRRAN 834
Query: 643 KTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 702
T+ G F + D +K++ + + +GTVF+NTY KTDVAAPFGGFKQSGFG
Sbjct: 835 DTEFGLAAGVFTR-------DSSKSLRVAEALHAGTVFVNTYQKTDVAAPFGGFKQSGFG 887
Query: 703 KDL 705
KD+
Sbjct: 888 KDM 890
|
|
| UNIPROTKB|F1P130 LOC100857360 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1524 (541.5 bits), Expect = 3.1e-166, Sum P(2) = 3.1e-166
Identities = 334/634 (52%), Positives = 429/634 (67%)
Query: 97 GQYLILRS-----LVLMN-VTRFLFDMK-VNVKRL-LVDNKMIHACNFGKEKDSAKDLVL 148
GQ L +R LV N + F D K V V+ L D KMI A + D L L
Sbjct: 261 GQELAIRGASRPGLVTKNGLVIFGNDGKMVLVRNLQFQDGKMIPASKYFSA-DETTTLEL 319
Query: 149 TESEEAIIPVLKTIWAGIL-NSEVSED-TDFFQSGAGSMDVVRLIEEIKENLQ-ITLQNE 205
TE E+ + +K IW GIL N V ED TDFF+SGA SM VVR++EEIK+ + LQNE
Sbjct: 320 TEEEKKMAEDIKAIWKGILSNVPVIEDSTDFFKSGASSMHVVRMLEEIKQKYSGLQLQNE 379
Query: 206 DVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGG 265
DV M++ F DF + R + +L + + NVN M V+ P Q FING+FVN+ G
Sbjct: 380 DVYMATKFADFIQMAVRKLRGENGEEELVIDYVSKNVNNMTVNMPYQCFINGQFVNADDG 439
Query: 266 SSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLM 324
+ + INP + S I SV A+ DVD A AA++AFE GEW R++AR+RG LM+KLADLM
Sbjct: 440 KTYDTINPTDGSVIASVSSASLADVDRAVAAAKEAFENGEWGRMNARERGRLMYKLADLM 499
Query: 325 EQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNF 384
E+++EELATIES+DSGAVYTLALKTH+GMS+ T++YFAGWCDKI G+TIPI ARPN N
Sbjct: 500 EEHQEELATIESIDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGATIPINQARPNHNL 559
Query: 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444
TFTK+EPIGVC ++ PWNYPLMML+WK A CLAAGNT+V+K ++V+PLTALK AELS +A
Sbjct: 560 TFTKKEPIGVCAIVIPWNYPLMMLAWKSAACLAAGNTLVLKTAQVTPLTALKFAELSAKA 619
Query: 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS----AAESNLKKVSL 500
GFPKGVINILPG+G + G+ +S+H +RKVGFTGST TG +IMKS +A +NLKKVSL
Sbjct: 620 GFPKGVINILPGSGGLVGQHLSKHPDVRKVGFTGSTPTGKEIMKSFFFSSAATNLKKVSL 679
Query: 501 ELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVK 560
ELGGKSPL+IF+D LDKAV+M MG V+FNKGENCI+AGR+FV+ +I+D F+ KVV E+K
Sbjct: 680 ELGGKSPLIIFNDCELDKAVKMGMGAVYFNKGENCIAAGRLFVEESIHDEFVRKVVEEIK 739
Query: 561 KMNHKAHLDKLIDYC-EKAKSEGARLLIGGKRLDRPGDVDAVI--KRANSTEYGLASGIF 617
KM LD+ D+ + K+ +LL + + G V ++ Y + +F
Sbjct: 740 KMKIGDPLDRSTDHGPQNHKAHLEKLLKYCETGVKEG-ATLVYGGRQVRRPGYFMEPTVF 798
Query: 618 TSDINKAMYFVDKIDSGTVF-INTYNKTDVAAPFGGFKQSGFGK-----DLDINKAMYFV 671
T D+ MY + G V I+ + D+ + +G DI+KA+Y
Sbjct: 799 T-DVEDHMYIAQEESFGPVMVISKFKNGDIDGVLQRANTTEYGLASGVFTKDISKALYIS 857
Query: 672 DKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
+K+++GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 858 EKLEAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 891
|
|
| ZFIN|ZDB-GENE-100519-4 aldh1l1 "aldehyde dehydrogenase 1 family, member L1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 346/702 (49%), Positives = 459/702 (65%)
Query: 29 LDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAILHPDGLLFTGSDGQKV 88
+D + A + N I W A I+G V+ GS +L D S+GQ +
Sbjct: 211 IDWNQPAEAIHNWIRGNDRVPGAW--AEIDGKSVSFYGS---TLLENDHF---SSNGQPL 262
Query: 89 RNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLVDNKMIHACNFGKEKDSAKDLVL 148
+ + + LVL + ++ N++ D KMI + K ++ + L
Sbjct: 263 KIPGAS-RAALVTKNGLVLFGNDGKMVILRKNLQ--FEDGKMIPGSQYFKAGVTST-VEL 318
Query: 149 TESEEAIIPVLKTIWAGIL-NSEVSEDT-DFFQSGAGSMDVVRLIEEIK-ENLQITLQNE 205
+E E ++ +W IL N E EDT DFF+SGA SMDVVRL+EE+K Q+ LQNE
Sbjct: 319 SEDENRFAEQMRVVWKSILTNVEKIEDTTDFFKSGAASMDVVRLVEEVKLRAAQLQLQNE 378
Query: 206 DVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGG 265
DV M++ F++F + R D + N + ++ +N M + P+QLFINGEFV++ GG
Sbjct: 379 DVYMATSFQEFIQMCVRKLRGEDEEEEFNVDYVEKKLNNMTIHIPHQLFINGEFVDAEGG 438
Query: 266 SSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLM 324
+ + INP + IC V +A DV+ A AA++AFE GEW +++ RDRG L++KLADLM
Sbjct: 439 KTYKSINPTDGQVICDVSLAQISDVEKAVAAAKEAFEEGEWGKMNPRDRGKLLYKLADLM 498
Query: 325 EQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNF 384
+Q++EELATIES+DSGAVYTLALKTH+GMSI T++YFAGWCDKI G TIPI ARPN N
Sbjct: 499 KQHQEELATIESIDSGAVYTLALKTHIGMSIQTFRYFAGWCDKIQGCTIPINQARPNRNL 558
Query: 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444
TFTK+EPIGVCG++ PWNYPLMML+WK A CLAAGNTVV+KP++V+PLTALK AEL+ A
Sbjct: 559 TFTKKEPIGVCGIVIPWNYPLMMLAWKTAACLAAGNTVVLKPAQVTPLTALKFAELTALA 618
Query: 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504
FPKGV+NILPG+G++ G+ +S H +RK+GFTGST G IMKS A SN+KKVSLELGG
Sbjct: 619 KFPKGVVNILPGSGSLVGQRLSDHPDVRKLGFTGSTEIGKHIMKSCAVSNVKKVSLELGG 678
Query: 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-- 562
KSPL+IF+D +LDKAVRM M VFFNKGENCI+AGR+F++ +I+D FLE+VV+E++KM
Sbjct: 679 KSPLIIFNDCDLDKAVRMGMSSVFFNKGENCIAAGRLFIEESIHDIFLERVVSEIRKMKI 738
Query: 563 -------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTE 609
NHKAHLDKL++YCEK EGA+L+ GGK+++RPG
Sbjct: 739 GDPLDRSTDHGPQNHKAHLDKLVEYCEKGVKEGAKLVCGGKQVERPG------------- 785
Query: 610 YGLASGIFTSDINKAMYFVDKIDSGTVFI-NTYNKTDVAAPFGGFKQSGFGK-----DLD 663
+ +FT D+ MY + G V I + ++ +V + FG D
Sbjct: 786 FFFEPTVFT-DVQDHMYIAVEESFGPVMIISKFSNGEVDKVLQRANATEFGLASGVFTRD 844
Query: 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
I+KA+Y +K+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 845 ISKALYVSEKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 886
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q63ZT8 | AL1L1_XENTR | 1, ., 5, ., 1, ., 6 | 0.5134 | 0.8730 | 0.6862 | yes | N/A |
| Q8K009 | AL1L2_MOUSE | 1, ., 5, ., 1, ., 6 | 0.5198 | 0.8730 | 0.6706 | yes | N/A |
| Q3SY69 | AL1L2_HUMAN | 1, ., 5, ., 1, ., 6 | 0.4886 | 0.8730 | 0.6706 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 709 | |||
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-174 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-172 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-164 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-157 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-152 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-149 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-148 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-148 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-147 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-145 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-145 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-143 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-140 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-140 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-138 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-135 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-133 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-132 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-131 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-129 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-126 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-123 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-122 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-121 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-118 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-117 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-117 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-117 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-116 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-116 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-115 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-114 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-111 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-109 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-108 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-108 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-107 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-107 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-106 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-105 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-102 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-102 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-102 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-97 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-96 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-96 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-95 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 2e-93 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 5e-93 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 7e-93 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-92 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 2e-85 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 3e-85 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-84 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 3e-84 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-82 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-82 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 2e-82 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 2e-81 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 5e-80 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 3e-78 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 6e-78 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-77 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 8e-73 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 3e-72 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-71 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 5e-70 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 4e-68 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 1e-67 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 7e-62 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-60 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 4e-60 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 4e-57 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-56 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-55 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 7e-53 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-50 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 7e-49 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 7e-49 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-48 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-47 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 8e-47 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 4e-46 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 7e-44 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-43 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 4e-43 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-40 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 4e-39 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 6e-37 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 7e-37 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 8e-37 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 9e-37 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 1e-36 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-36 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 8e-35 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 5e-31 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 2e-27 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 8e-27 | |
| cd08703 | 100 | cd08703, FDH_Hydrolase_C, The C-terminal subdomain | 9e-26 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-24 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 3e-23 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 5e-21 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 7e-21 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-19 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 7e-17 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 3e-13 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 2e-10 | |
| pfam02911 | 100 | pfam02911, Formyl_trans_C, Formyl transferase, C-t | 2e-09 | |
| cd08704 | 87 | cd08704, Met_tRNA_FMT_C, C-terminal domain of Form | 6e-09 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 2e-06 | |
| pfam00550 | 66 | pfam00550, PP-binding, Phosphopantetheine attachme | 2e-06 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-06 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 5e-06 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 2e-05 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-05 | |
| PRK00005 | 309 | PRK00005, fmt, methionyl-tRNA formyltransferase; R | 9e-05 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 9e-05 | |
| COG0223 | 307 | COG0223, Fmt, Methionyl-tRNA formyltransferase [Tr | 2e-04 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-04 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 3e-04 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 4e-04 | |
| cd08702 | 92 | cd08702, Arna_FMT_C, C-terminal subdomain of the f | 0.003 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 712 bits (1840), Expect = 0.0
Identities = 296/468 (63%), Positives = 356/468 (76%), Gaps = 51/468 (10%)
Query: 246 DVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GE 304
+ P+QLFINGEFV++ GG + INP + S IC V +A +DVD A AA++AFE GE
Sbjct: 1 TLKMPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGE 60
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W +++ARDRG LM++LADLME+++EELATIESLDSGAVYTLALKTHVGMSI T++YFAGW
Sbjct: 61 WGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGW 120
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
CDKI G TIPI ARPN N T TKREPIGVCG++ PWNYPLMML+WKMA CLAAGNTVV+
Sbjct: 121 CDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVL 180
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KP++V+PLTALK AEL+V+AGFPKGVINILPG+G++ G+ +S H +RK+GFTGST G
Sbjct: 181 KPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGK 240
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
IMKS A SNLKKVSLELGGKSPL+IF D ++DKAVRM M VFFNKGENCI+AGR+FV+
Sbjct: 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVE 300
Query: 545 SNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGG 589
+I+D F+ +VV EVKKM NHKAHLDKL++YCE+ EGA L+ GG
Sbjct: 301 ESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGG 360
Query: 590 KRLDRPG-----------------------------------DVDAVIKRANSTEYGLAS 614
K++DRPG DVD V++RAN TEYGLAS
Sbjct: 361 KQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLAS 420
Query: 615 GIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
G+FT DINKA+Y DK+++GTVF+NTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 421 GVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 468
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 626 bits (1616), Expect = 0.0
Identities = 228/463 (49%), Positives = 291/463 (62%), Gaps = 53/463 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSR 307
P LFIN EFV+SV G + INPA E IC V A+ +DVD A AA AFE G W +
Sbjct: 2 QPTGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRK 61
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
+ R+RG L+ KLADL+E++++ELA +ESLD+G + K V +SI +Y+AGW DK
Sbjct: 62 MDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADK 121
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I G TIPI + +T+REPIGVCG I PWN+PL+ML+WK+AP LAAGNTVV+KP+
Sbjct: 122 IQGKTIPI----DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPA 177
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
E +PL+AL LAEL AGFP GV+NI+PG G G AIS H+ + K+ FTGST G IM
Sbjct: 178 EQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIM 237
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
++AA+SNLKKV+LELGGKSP ++FDD +LDKAV + G+FFN+G+ C + RIFV +I
Sbjct: 238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESI 297
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
YD F+EK +K KA DK++ Y E K EGA LL GG+R
Sbjct: 298 YDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERH 357
Query: 593 DRPG---------------------------------DVDAVIKRANSTEYGLASGIFTS 619
G D VI+RAN TEYGLA+G+FT
Sbjct: 358 GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTK 417
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
DINKA+ + +GTV++NTYN D A PFGGFKQSGFG++L
Sbjct: 418 DINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGREL 460
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 506 bits (1305), Expect = e-174
Identities = 185/453 (40%), Positives = 271/453 (59%), Gaps = 57/453 (12%)
Query: 259 FVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMF 318
+V+S + +E INPA I +V A ++DVD A AA AF+ W++ +R ++
Sbjct: 1 WVDSSSET-IEVINPATGEVIATVPAATAEDVDAAVAAARAAFK-AWAKTPPSERAAILL 58
Query: 319 KLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHA 378
K ADL+E+ ++ELA +E+L++G A + V +IDT +Y+AG K+ G T+P
Sbjct: 59 KAADLLEERRDELAELETLETGKPLAEA-RGEVPRAIDTLRYYAGLARKLEGETLPSDPG 117
Query: 379 RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLA 438
+T+REP+GV G ITPWN+PL++ +WK+AP LAAGNTVV+KPSE++PLTAL LA
Sbjct: 118 V----LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLA 173
Query: 439 ELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKV 498
EL AG P GV+N++ G+G+ G+A+ +H + KV FTGST G +I K+AA+ NLK+V
Sbjct: 174 ELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRV 232
Query: 499 SLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTE 558
+LELGGK+PL++FDD +LD AV ++ G F N G+ C + R+ V +IYD F+E++V
Sbjct: 233 TLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEA 292
Query: 559 VKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------- 596
K + K ++++ Y E AK EGA+LL GG+ G
Sbjct: 293 AKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTV 352
Query: 597 --------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDK 630
D D I+ AN TEYGLA+G+FT+D+ +A+ +
Sbjct: 353 LADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARR 412
Query: 631 IDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDL 662
+++G V+IN Y D A PFGGFKQSGFG++
Sbjct: 413 LEAGMVWINDYTTGDPEALPFGGFKQSGFGREG 445
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 501 bits (1292), Expect = e-172
Identities = 196/462 (42%), Positives = 271/462 (58%), Gaps = 54/462 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
++FIN E+ +SV G + INPA IC VQ + DVD A AA AF+ W +
Sbjct: 7 TKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTM 66
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L+ KLADL+E+++ LA++E+LD+G ++ + + +I +Y+AGW DKI
Sbjct: 67 DASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKI 126
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP+ FT+T+ EP+GVCG I PWN+PL+M +WK+AP LA GNTVV+KP+E
Sbjct: 127 HGKTIPM----DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAE 182
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL LA L AGFP GV+N++PG G G AIS H I KV FTGST G I +
Sbjct: 183 QTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +SNLK+V+LELGGKSP ++F D +LD AV + +FFN G+ C + R FV +IY
Sbjct: 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY 302
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+++ V KK + K+++ E K EGA+L GGKR
Sbjct: 303 DEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHG 362
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G +D VI+RAN+T YGLA+ +FT D
Sbjct: 363 DKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKD 422
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
I+KA+ F + + +GTV++N YN APFGG+K SG G++L
Sbjct: 423 IDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGREL 464
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 481 bits (1240), Expect = e-164
Identities = 199/465 (42%), Positives = 273/465 (58%), Gaps = 57/465 (12%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLS 309
P LFIN EFV S G +++ +NP+ I SV A +DVD A AA KAFE WS+++
Sbjct: 7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVT 66
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
+RG L+ KLADL+E+N++ LA IE+LDSG Y + I +Y+AGW DKI
Sbjct: 67 GEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQ 126
Query: 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
G TIP + + +T EP GVCG I PWNYPL M +WK+AP LAAGNTVV+KP+E
Sbjct: 127 GKTIPTSPNK----LAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAEN 182
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
+PL+ L A L AGFP GV+NI+PG GAV G A+++H + K+ FTGST TG +MK+
Sbjct: 183 TPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKA 242
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
AA NLK V+LE GGKSP ++F+D +LD+AV+ + G+ +N G+NC + RI+V +IYD
Sbjct: 243 AA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYD 301
Query: 550 AFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
F+EK V VK+ K D+++ Y EK K EGA+L+ GG++
Sbjct: 302 KFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAP 361
Query: 594 RPG------------------------------------DVDAVIKRANSTEYGLASGIF 617
+ IK+AN T YGLA+ +F
Sbjct: 362 EGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVF 421
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
T DI +A ++++G V+IN+ N +DV PFGGFK SG G++L
Sbjct: 422 TKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGREL 466
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 461 bits (1189), Expect = e-157
Identities = 176/444 (39%), Positives = 254/444 (57%), Gaps = 58/444 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKE 329
INPA V A++ DVD A AA AFE G W +L+ +RG L+ +LADL+E N E
Sbjct: 2 INPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAE 61
Query: 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKR 389
ELA +E+ D+G + + V + ++Y+AG DKI G+ IP+ FT+R
Sbjct: 62 ELAELETRDNGKLIR-ETRAQVRYLAEWYRYYAGLADKIEGAVIPV---DKGDYLNFTRR 117
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP+GV ITPWN PL++L+ K+AP LAAGNTVV+KPSE +P + L+LA+L+ AGFP G
Sbjct: 118 EPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPG 177
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
V+N++ G G TGEA+ +H + K+ FTG T TG I ++AAE NL V+LELGGKSP +
Sbjct: 178 VVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNI 236
Query: 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK------MN 563
+FDD +LD AV + G+F G+ C++ R+ V +IYD F+E++V + ++
Sbjct: 237 VFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLD 296
Query: 564 ---------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
+ L+K+ Y +A+ EGAR+L GG+R
Sbjct: 297 PETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTND 356
Query: 597 -------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
D + I AN +EYGLA+GI+T D+ +A I++GTV+
Sbjct: 357 MRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVW 416
Query: 638 INTYNKTDVAAPFGGFKQSGFGKD 661
+NTY ++PFGGFK SG G++
Sbjct: 417 VNTYRALSPSSPFGGFKDSGIGRE 440
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 449 bits (1158), Expect = e-152
Identities = 176/461 (38%), Positives = 265/461 (57%), Gaps = 60/461 (13%)
Query: 265 GSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADL 323
G + INPA + V ++ DVD A AA +AFE G WSRLS +R ++ +LADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 324 MEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSN 383
+E +++ELA +E+LD G + AL V + +T++++A DK+ G P
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT----GPDA 116
Query: 384 FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR 443
REP+GV G + PWN+PL+M +WK+AP LAAGN+VV+KP+E SPLTAL+LAEL++
Sbjct: 117 LALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALE 176
Query: 444 AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELG 503
AG P GV+N++PG G GEA+ H+ + + FTGST G + ++ + +SNLK+V LE G
Sbjct: 177 AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECG 236
Query: 504 GKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM 562
GKSP ++F D +LD A + G+F+N+GE C + R+ V +I D FLEKVV ++
Sbjct: 237 GKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREW 296
Query: 563 N---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------- 596
+AH DK++ Y E K+EGARL+ GGKR+
Sbjct: 297 KPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFD 356
Query: 597 ------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKID 632
+ + AN + YGLA+ ++TSD+++A ++
Sbjct: 357 GVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLR 416
Query: 633 SGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDK 673
+GTV++N +++ D+ PFGGFKQSG G+D K+++ +DK
Sbjct: 417 AGTVWVNCFDEGDITTPFGGFKQSGNGRD----KSLHALDK 453
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 441 bits (1136), Expect = e-149
Identities = 176/422 (41%), Positives = 254/422 (60%), Gaps = 56/422 (13%)
Query: 291 DIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350
D A AA AF+ W+ L +R ++ KLADL+E+ +EELA +E+L++G
Sbjct: 1 DAAVAAARAAFKA-WAALPPAERAAILRKLADLLEERREELAALETLETGKPIE-EALGE 58
Query: 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410
V + DT++Y+AG ++ G IP +REP+GV G ITPWN+PL++ +W
Sbjct: 59 VARAADTFRYYAGLARRLHGEVIPSPDPGE---LAIVRREPLGVVGAITPWNFPLLLAAW 115
Query: 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLK 470
K+AP LAAGNTVV+KPSE++PLTAL LAEL AG P GV+N++ G G G A++ H +
Sbjct: 116 KLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPR 175
Query: 471 IRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530
+ K+ FTGST G IM++AAE NLK+V+LELGGKSPL++FDD +LD AV+ ++ G F N
Sbjct: 176 VDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGN 234
Query: 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKK---------------MNHKAHLDKLIDYC 575
G+ C +A R+ V +IYD F+E++V VK + A LD+++ Y
Sbjct: 235 AGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYI 294
Query: 576 EKAKSEGARLLIGGKRLDRPG----------------------------------DVDAV 601
E AK+EGA+LL GGKRL+ D +
Sbjct: 295 EDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEA 354
Query: 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGK 660
I+ AN TEYGLA+G+FT D+ +A+ +++++GTV+IN Y+ + +APFGG KQSG G+
Sbjct: 355 IELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGR 414
Query: 661 DL 662
+
Sbjct: 415 EG 416
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 440 bits (1133), Expect = e-148
Identities = 197/465 (42%), Positives = 275/465 (59%), Gaps = 53/465 (11%)
Query: 247 VSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWS 306
P LFINGEFV+SV G +++ NP+ I + A DVDIA A AFE +W
Sbjct: 3 YEQPTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWG 62
Query: 307 R-LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWC 365
+S RG + KLADLME+N + LA+IE+LD+G + A + V S DT++Y+ GW
Sbjct: 63 LKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWA 122
Query: 366 DKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425
DKI G I + T+T+ EPIGVCG I PWN+PL+M +WK+AP LAAGNT+V+K
Sbjct: 123 DKIHGQVIETDIKK----LTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLK 178
Query: 426 PSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485
PSE++PL+AL + +L AGFP GVIN++ G G G AIS H+ I KV FTGST+ G K
Sbjct: 179 PSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRK 238
Query: 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
+M++AA+SNLKKV+LELGGKSP ++FDD +L+ AV + G+FFN G+ C + RI+V
Sbjct: 239 VMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQE 298
Query: 546 NIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGK 590
IYD F+++ + KK+ + ++++ Y E K+EGA + GGK
Sbjct: 299 GIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGK 358
Query: 591 RLDRPG---------------------------------DVDAVIKRANSTEYGLASGIF 617
R G + IKRAN + YGLA+ +F
Sbjct: 359 RHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVF 418
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
T++IN A+ + + +GTV++N YN PFGG+KQSG G++L
Sbjct: 419 TNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGREL 463
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 438 bits (1128), Expect = e-148
Identities = 187/439 (42%), Positives = 266/439 (60%), Gaps = 54/439 (12%)
Query: 272 NPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331
NPA I V A+++DVD A AA AFE WS + +RG ++++LA+L+ N +EL
Sbjct: 3 NPATGELIARVAQASAEDVDAAVAAARAAFEA-WSAMDPAERGRILWRLAELILANADEL 61
Query: 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREP 391
A +ESLD+G A + V + DT++Y+AGW DKI G IP+ R +T REP
Sbjct: 62 ARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPV---RG-PFLNYTVREP 117
Query: 392 IGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVI 451
+GV G I PWN+PLM +WK+AP LAAGNTVV+KP+E++PL+AL++AEL AGFP GV+
Sbjct: 118 VGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVL 177
Query: 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIF 511
N++ G G V G A+ +H + K+ FTGST G KIM+ AA NLK+VSLELGGKS ++F
Sbjct: 178 NVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVF 236
Query: 512 DDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV--------------- 556
D +LD AVR + G+F+N+G+ C + R+ V +IYD FLE+
Sbjct: 237 ADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPK 296
Query: 557 TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG-------------------- 596
T++ + +A D+++DY + + EGARLL GGKR G
Sbjct: 297 TQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQE 356
Query: 597 -------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK 643
D + ++ AN TEYGLA+G++T D+ +A + +GTV+INTYN+
Sbjct: 357 EIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNR 416
Query: 644 TDVAAPFGGFKQSGFGKDL 662
D +PFGG+KQSGFG+++
Sbjct: 417 FDPGSPFGGYKQSGFGREM 435
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 437 bits (1126), Expect = e-147
Identities = 183/458 (39%), Positives = 258/458 (56%), Gaps = 57/458 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
+L I+GE+V+ G S++E INPA I +V A ++DVD A AA AFE WSRLSA
Sbjct: 1 YKLLIDGEWVD--GASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE-AWSRLSA 57
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+R ++ ++ADL+E EELA + +L++G + A + + D +Y+A ++ G
Sbjct: 58 EERAAILRRIADLLEARAEELAALITLETGKPISEARGE-IARAADFIRYYAEEARRLEG 116
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
TIP + +REP+GV G ITPWN+PL + +WK+AP LAAGNTVV+KPSE +
Sbjct: 117 ETIPT----DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQT 172
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PL+AL LAEL+ AG P GV+N++ G GA G+A+ H + + FTGST G I +A
Sbjct: 173 PLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAA 232
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A NLK V+LELGGKSP ++ +D +LD AV ++ G FFN G+ C +A R+ V ++YD
Sbjct: 233 AA-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDE 291
Query: 551 FLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-- 593
F+E++V + + LD++ Y E A +EGARLL GGKR
Sbjct: 292 FVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGY 351
Query: 594 --RPG---------------------------DVDAVIKRANSTEYGLASGIFTSDINKA 624
P D + I+ AN TEYGLA+ IFT D+ +A
Sbjct: 352 FVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARA 411
Query: 625 MYFVDKIDSGTVFINTYNKT--DVAAPFGGFKQSGFGK 660
++++G V IN Y PFGG KQSG G+
Sbjct: 412 FRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGR 449
|
Length = 472 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 433 bits (1115), Expect = e-145
Identities = 178/463 (38%), Positives = 261/463 (56%), Gaps = 61/463 (13%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARD 312
+I+GE+V + G + + INPAN I +V ++D A AA +AF+ GEW L A++
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R L+F++AD + ++ EELA +E+L++G + + + + ++Y+AG K G
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEV 119
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
P + T REP+GVCGLITPWNYPL+ +WK+AP LAAGNTVV+KPSEV+PL
Sbjct: 120 YD----VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPL 175
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
T + L EL AG P GV+N++ G+GA G +++ + V FTG T TG IM++AA
Sbjct: 176 TTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG 235
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAG-RIFVDSNIYDAF 551
N+KKV+LELGGK+P ++F D + + AV ++ GVFFN G+ C SAG R+ V+ +I+D F
Sbjct: 236 -NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVC-SAGSRLLVEESIHDKF 293
Query: 552 LEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
+ + KK+ H +K++ Y + K EGARL+ GGKR
Sbjct: 294 VAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDE 353
Query: 597 -------------DVDA------------------------VIKRANSTEYGLASGIFTS 619
DVD I+ AN T YGLA ++T
Sbjct: 354 LAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTK 413
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
DI +A ++ +GTV+IN Y+ AP+GG+KQSG G++L
Sbjct: 414 DIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGREL 456
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-145
Identities = 185/469 (39%), Positives = 270/469 (57%), Gaps = 57/469 (12%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRL 308
+LFING+FV++ G + I+P N I V +++DVD A AA KAF EG W R+
Sbjct: 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRM 62
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+ +R ++ + ADL+E++ +ELA +E+ D+G Y A V ++ ++Y+AGW DKI
Sbjct: 63 TGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKI 122
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G T+P + +T EPIGV G I PWN+PL+M +WK+ P LA GNT+V+KP+E
Sbjct: 123 HGMTLPAD----GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAE 178
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PL+AL A+L+ AG P GV+NI+ G G G AI+ H+ + KV FTGST G IM+
Sbjct: 179 QTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
AA+SNLK V+LELGGKSP ++ +D ++DKAV ++ +FFN+G+ C + R FV +IY
Sbjct: 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY 298
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+EK K K +K++ Y E K EGA L+ GG R+
Sbjct: 299 DEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIG 358
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G VD VIKRAN+++YGLA+G+F+ +
Sbjct: 359 SKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKN 418
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMY 669
I+ A + +GTV++N Y+ D + PFGG+K SG G++ K +Y
Sbjct: 419 IDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGRE----KGIY 463
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 427 bits (1100), Expect = e-143
Identities = 171/443 (38%), Positives = 247/443 (55%), Gaps = 58/443 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
NPA + V + +VD A AA++AF G WSR+S +R ++ K+ADL+E +E
Sbjct: 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG-WSRMSPAERARILHKVADLIEARADE 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
LA +ESLD+G TLA + + +++FA + ++ G + P N + R+
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALN----YVLRQ 116
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P+GV GLITPWN PLM+L+WK+AP LA GNTVV+KPSE +PLTA LAEL+ AG P GV
Sbjct: 117 PVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGV 176
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+N++ G G G A+ H + + FTG T TG IM++AA NLK VSLELGGK+P ++
Sbjct: 177 VNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIV 235
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK--------- 561
F D +LD+AV ++ F N GE C++ RI V +IYD FLE+ V K
Sbjct: 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDP 295
Query: 562 ------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------- 596
+ K HL+K++ Y E A++EGA +L GG R + P
Sbjct: 296 DTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDS 355
Query: 597 ------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
D + I+ AN T YGLA+ ++T D+ +A ++++GTV++
Sbjct: 356 RVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWV 415
Query: 639 NTYNKTDVAAPFGGFKQSGFGKD 661
N + D+ PFGG K SG G++
Sbjct: 416 NCWLVRDLRTPFGGVKASGIGRE 438
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 419 bits (1080), Expect = e-140
Identities = 167/440 (37%), Positives = 244/440 (55%), Gaps = 56/440 (12%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
INPA I V A + D D A AA AF+ W + +AR+R ++ + ADL+ + E+
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFK-TWRKTTARERAAILRRWADLIRERAED 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
LA + +L+ G A + V + ++FA +I G TIP + ++
Sbjct: 61 LARLLTLEQGKPLAEA-RGEVDYAASFLEWFAEEARRIYGRTIP---SPAPGKRILVIKQ 116
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P+GV ITPWN+P M++ K+AP LAAG TVV+KP+E +PL+AL LAEL+ AG P GV
Sbjct: 117 PVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGV 176
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+N++ G+ A GEA+ ++RK+ FTGST G +M AA+ +K+VSLELGG +P ++
Sbjct: 177 LNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIV 235
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562
FDD +LDKAV ++ F N G+ C+ A RI+V +IYD F+EK+V VKK+
Sbjct: 236 FDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDE 295
Query: 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
N +A ++K+ E A ++GA++L GGKRL G
Sbjct: 296 GTDMGPLINERA-VEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIM 354
Query: 597 ---------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
D VI RAN T YGLA+ +FT D+ +A + +++G V INT
Sbjct: 355 NEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTG 414
Query: 642 NKTDVAAPFGGFKQSGFGKD 661
+D APFGG K+SG G++
Sbjct: 415 LISDAEAPFGGVKESGLGRE 434
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 419 bits (1078), Expect = e-140
Identities = 189/463 (40%), Positives = 263/463 (56%), Gaps = 58/463 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
FI+GE+V G++ E INPAN I +V A +DV+ A AA +A GEW+ +S +R
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ-GEWAAMSPMER 59
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
G ++ + ADL+ + EELA +E+LD+G + + D +++FAG + G I
Sbjct: 60 GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
P+ +F +T REP+GVC I WNYPL + SWK+AP LAAGN +V KPSE +PLT
Sbjct: 120 PL----GGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLT 175
Query: 434 ALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493
ALK+AE+ AG PKGV N++ G GA G + H + KV FTG TG KIM +AA
Sbjct: 176 ALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAG- 234
Query: 494 NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLE 553
+LK V++ELGGKSPL++FDD +L+ AV +M G FF+ G+ C + R+FV I + FL
Sbjct: 235 HLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLA 294
Query: 554 KVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG-- 596
++V +++ AH DK++ Y EK K+EGA L GG R + G
Sbjct: 295 RLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQ 354
Query: 597 -----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
D D VI RAN TEYGLA G+FT+D+
Sbjct: 355 NGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADL 414
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDI 664
+A D++++GTV+INTYN APFGG+KQSG G++
Sbjct: 415 GRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGK 457
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 415 bits (1070), Expect = e-138
Identities = 173/461 (37%), Positives = 263/461 (57%), Gaps = 59/461 (12%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
L+I+G +V + G + E INPA + +VQ A DV+ A +A++ + W+ ++A
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK-IWAAMTAM 66
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ + D++ + +ELA +E+LD+G + D +Y+AG + G
Sbjct: 67 ERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGE 126
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
IP+ +F +T+REP+GVC I WNYP+ + WK AP LAAGN ++ KPSEV+P
Sbjct: 127 QIPLR----GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTP 182
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTALKLAE+ AG P GV N++ G G V G +++H I KV FTG TG K+M +AA
Sbjct: 183 LTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
S LK+V++ELGGKSPL++FDD +LD+A ++M F++ G+ C + R+FV +I AF
Sbjct: 242 AS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAF 300
Query: 552 LEKVVTEVKKM----------NH-----KAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
+++ V+++ N AH DK++ Y EK K+EGARLL GG+RL G
Sbjct: 301 EARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGG 360
Query: 597 -------------------------------------DVDAVIKRANSTEYGLASGIFTS 619
D D VI RAN TEYGLA+G+FT+
Sbjct: 361 FANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTA 420
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGK 660
D+++A + ++++G +INT+ ++ P GG+KQSG G+
Sbjct: 421 DLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGR 461
|
Length = 488 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 406 bits (1045), Expect = e-135
Identities = 187/460 (40%), Positives = 269/460 (58%), Gaps = 53/460 (11%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSA 310
+LFINGEFV++ G + E +P I + + +DVD+A AA +AF+ G W R+S
Sbjct: 22 KLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSG 81
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+RG +M K ADL+E++ EELA ++++D+G ++ L + + +Y+AG DKI G
Sbjct: 82 FERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHG 141
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
T+ ++ +T +EPIGV G I PWN+P M K+AP LAAG T+V+KP+E +
Sbjct: 142 ETLKMSRQL----QGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQT 197
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PL+AL A L+ AG P GVIN++ G G G AI+ H+ + KV FTGST G KIM++A
Sbjct: 198 PLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAA 257
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A SNLK+VSLELGGKSPL+IFDD ++D AV +++ G+F+NKGE C+++ R++V IYD
Sbjct: 258 ATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDE 317
Query: 551 FLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP 595
F++K+V + K K +K++ Y E K EGA LL GGK
Sbjct: 318 FVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDK 377
Query: 596 G---------------------------------DVDAVIKRANSTEYGLASGIFTSDIN 622
G V+ IK+AN+T+YGLA+GI T D++
Sbjct: 378 GYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLD 437
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A I +GT+++N Y D PFGG+K SGFG+D
Sbjct: 438 VANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQ 477
|
Length = 501 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-133
Identities = 174/444 (39%), Positives = 255/444 (57%), Gaps = 61/444 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
I PA + +V A ++DVD+A +A+ A + EWS S +RG ++ K ADL+ + +E
Sbjct: 2 IEPATGEVLATVHCAGAEDVDLAVKSAKAAQK-EWSATSGMERGRILRKAADLLRERNDE 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
+A +E++D+G A + + S D +Y+AG + G +P+ P +F +T+RE
Sbjct: 61 IARLETIDNGKPIEEA-RVDIDSSADCLEYYAGLAPTLSGEHVPL----PGGSFAYTRRE 115
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P+GVC I WNYP+ + SWK AP LA GN +V KPS +PLTAL LAE+ AG P GV
Sbjct: 116 PLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGV 175
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
N++ G G TG+ + +H + KV FTGS TG K+M +AA +K V+LELGGKSPL+I
Sbjct: 176 FNVVQGGGE-TGQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLII 233
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN------- 563
FDD +L+ AV +M F ++G+ C + R+FV +I D F E++V KK+
Sbjct: 234 FDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDE 293
Query: 564 --------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----------RP--------- 595
+ HL+K++ Y E AK EGA++L GG+R+ P
Sbjct: 294 DTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDD 353
Query: 596 ---------GDV---------DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
G V + VI+RAN T YGLA+G+FT D+ +A + ++ +GT +
Sbjct: 354 MTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCW 413
Query: 638 INTYNKTDVAAPFGGFKQSGFGKD 661
INTYN + V PFGG+KQSGFG++
Sbjct: 414 INTYNISPVEVPFGGYKQSGFGRE 437
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 398 bits (1025), Expect = e-132
Identities = 165/463 (35%), Positives = 246/463 (53%), Gaps = 58/463 (12%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLS 309
+L INGE V G NPA + + A++ VD A AA+ AF WS+ +
Sbjct: 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE-WSQTT 59
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
++R + KLAD +E+N +E A +ESL+ G LAL + +D +++FAG +
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 370 GSTIPIAHARPNSNFT-FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G A T +R+P+GV I PWNYPLMM +WK+AP LAAGNTVV+KPSE
Sbjct: 120 GK----AAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSE 175
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
++PLTALKLAEL+ P GV+N++ G GA G+A+ H K+R V TGS TG ++
Sbjct: 176 ITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLS 234
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+AA ++K+ LELGGK+P+++FDD +LD V ++N G++C +A RI+ IY
Sbjct: 235 AAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY 293
Query: 549 DAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEG-ARLLIGGKRL 592
D + K+ TE+ + AH D++ + E+AK+ G R++ GG+
Sbjct: 294 DDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP 353
Query: 593 DRPG---------------------------------DVDAVIKRANSTEYGLASGIFTS 619
D G D D ++ AN ++YGLAS ++T
Sbjct: 354 DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTR 413
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
D+ +A ++ G ++NT+ P GG KQSG+GKD+
Sbjct: 414 DVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDM 456
|
Length = 475 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-131
Identities = 162/373 (43%), Positives = 232/373 (62%), Gaps = 29/373 (7%)
Query: 296 AAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSI 355
AA AF+ W+ L +R ++ K+ADL+E+ +EELA +E+L++G AL V +I
Sbjct: 2 AARAAFK-AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAI 59
Query: 356 DTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPC 415
DT++Y AG DK+ G +P + +REP+GV G+ITPWN+PL++ +WK+AP
Sbjct: 60 DTFRYAAGLADKLGGPELPSPDPGG---EAYVRREPLGVVGVITPWNFPLLLAAWKLAPA 116
Query: 416 LAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVG 475
LAAGNTVV+KPSE++PLTAL LAEL AG P GV+N++PG G G A+ H ++ K+
Sbjct: 117 LAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKIS 176
Query: 476 FTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENC 535
FTGST G IMK+AAE NLK V+LELGGKSP+++ +D +LD AV ++ G FFN G+ C
Sbjct: 177 FTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQIC 235
Query: 536 ISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGG-----K 590
+A R+ V +IYD F+EK+VT ++ + A+ I G
Sbjct: 236 TAASRLLVHESIYDEFVEKLVT-------------VLVDVD-PDMPIAQEEIFGPVLPVI 281
Query: 591 RLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK-TDVAAP 649
R D + I AN TEYGL +G+FT D+N+A+ +++ +GTV+IN + AP
Sbjct: 282 RFK---DEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAP 338
Query: 650 FGGFKQSGFGKDL 662
FGG K SG G++
Sbjct: 339 FGGVKNSGIGREG 351
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-129
Identities = 168/460 (36%), Positives = 234/460 (50%), Gaps = 66/460 (14%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+I+G +V G +++ INPA E I +V + + DVD A AA +AF WS S +
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPA-WSATSVEE 59
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R L+ ++A+ E +ELA +L+ GA TLA VG+ I + A L
Sbjct: 60 RAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAA----DALK-D 114
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
R NS REPIGVCGLITPWN+PL + K+AP LAAG TVV+KPSEV+PL
Sbjct: 115 FEFEERRGNSLVV---REPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPL 171
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
+A+ LAE+ AG P GV N++ G G V GEA+S H + V FTGST G ++ ++AA+
Sbjct: 172 SAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+ +K+V+LELGGKS +I DD +L+KAV + F N G++C + R+ V + Y
Sbjct: 232 T-VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAE 290
Query: 553 EKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP-- 595
E + + A D++ Y +K EGARL+ GG RP
Sbjct: 291 EIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGG--PGRPEG 348
Query: 596 ------------GDV--DAVIKR----------------------ANSTEYGLASGIFTS 619
DV D I R AN T YGLA ++++
Sbjct: 349 LERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSA 408
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
D +A ++ +G V IN + APFGG+KQSG G
Sbjct: 409 DPERARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNG 447
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 382 bits (984), Expect = e-126
Identities = 170/442 (38%), Positives = 245/442 (55%), Gaps = 55/442 (12%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
++PA I +V A++ DVD A AA AF W R + +R + KLAD +E+N EE
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS-WRRTTPAERSKALLKLADAIEENAEE 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
LA +ES ++G L + ++D +++FAG + G P A + + +RE
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEG---PAAGEYLPGHTSMIRRE 117
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
PIGV I PWNYPLMM +WK+AP LAAGNTVV+KPSE +PLT L LAEL+ P GV
Sbjct: 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGV 176
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+N++ G GA G+A+ H ++R V TGS TG K+ ++AA LK+V LELGGK+P+++
Sbjct: 177 VNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIV 235
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK--------- 561
FDD +LD AV ++N G++C +A R++V ++YD F+ +V V
Sbjct: 236 FDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDE 295
Query: 562 ------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------- 596
+N A +++ + E+A AR+L GG+R + PG
Sbjct: 296 DTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQ 354
Query: 597 --------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642
D D I+ AN EYGLAS ++T D+ +AM ++D GTV++NT+
Sbjct: 355 EEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHI 414
Query: 643 KTDVAAPFGGFKQSGFGKDLDI 664
P GGFKQSG+GKDL I
Sbjct: 415 PLAAEMPHGGFKQSGYGKDLSI 436
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 376 bits (967), Expect = e-123
Identities = 172/466 (36%), Positives = 259/466 (55%), Gaps = 59/466 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLS 309
QL ING+FV++ G + ++P I V +++DV+ A AA KAF EG W +++
Sbjct: 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMT 117
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
A +R ++ + ADL+E++ +ELA +E+ D+G Y + K + M ++Y+AGW DKI
Sbjct: 118 AYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIH 177
Query: 370 GSTIP---IAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426
G T+P H + T EPIGV G I PWN+PL+M +WK+ P LA GNT+V+K
Sbjct: 178 GLTVPADGPHHVQ-------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 230
Query: 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
+E +PL+AL A+L AG P GV+N++ G G G A++ H+ + K+ FTGST TG +
Sbjct: 231 AEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 290
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
++ AA+SNLK V+LELGGKSP ++ +D ++DKAV ++ +FFN+G+ C + R FV
Sbjct: 291 LELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHER 350
Query: 547 IYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR 591
+YD F+EK K +K++ Y + GA L GG R
Sbjct: 351 VYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDR 410
Query: 592 LDRPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618
G D+D VI+RAN+T YGLA+G+FT
Sbjct: 411 FGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFT 470
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDI 664
+++ A + GTV++N ++ D A PFGG+K SG G++ I
Sbjct: 471 QNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGI 516
|
Length = 538 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 371 bits (956), Expect = e-122
Identities = 166/459 (36%), Positives = 247/459 (53%), Gaps = 62/459 (13%)
Query: 254 FINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+I+GE+V GG E NP++ S + A+++D D A AA AF W R S
Sbjct: 4 YIDGEWV--AGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA-WRRTSPEA 60
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL-KTHVGMSIDTWKYFAGWCDKILGS 371
R ++ K D +E KEELA + + + G TL + V + ++Y+AG ++ G
Sbjct: 61 RADILDKAGDELEARKEELARLLTREEGK--TLPEARGEVTRAGQIFRYYAGEALRLSGE 118
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
T+P RP T REP+GV GLITPWN+P+ + +WK+AP LA GNTVV KP+E++P
Sbjct: 119 TLP--STRPGV-EVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTP 175
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
+A L E+ AG P GV N++ G+G+ G+A+ +H + V FTGST G +I +AA
Sbjct: 176 ASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA 235
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+ +V LE+GGK+PLV+ DD +LD AV ++ G FF+ G+ C ++ R+ V I+D F
Sbjct: 236 -ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRF 294
Query: 552 LEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP- 595
+E +V K + + L+K + Y E A+SEGA+L+ GG+RL RP
Sbjct: 295 VEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPD 354
Query: 596 -------------------------GDVDAVIK---------RANSTEYGLASGIFTSDI 621
G V AVI+ AN TE+GL++GI T+ +
Sbjct: 355 EGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSL 414
Query: 622 NKAMYFVDKIDSGTVFIN-TYNKTDVAAPFGGFKQSGFG 659
A +F ++++G V +N D PFGG K S +G
Sbjct: 415 KHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYG 453
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 369 bits (950), Expect = e-121
Identities = 156/442 (35%), Positives = 237/442 (53%), Gaps = 59/442 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
+P+ + + DVD A AA +AFE W RLS +RG L+ ++A L+ ++ +E
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADE 61
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
LA +ESLD+G T A + V + ++Y+ G DK+ G TIP+ F +T RE
Sbjct: 62 LARLESLDTGKPLTQA-RADVEAAARYFEYYGGAADKLHGETIPLG----PGYFVYTVRE 116
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P GV G I PWNYPL + +AP LAAGN VV+KP+E +PLTAL+LAEL+ AG P G
Sbjct: 117 PHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGA 176
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+N++ G GA G A+ H + + FTGS TG+ +M++AAE N+ V+LELGGKSP ++
Sbjct: 177 LNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIV 235
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAG-RIFVDSNIYDAFLEKVVTEVKK-------- 561
F D +L+ A+ + + + N G+ C SAG R+ V +IYD LE++V +
Sbjct: 236 FADADLEAALPVVVNAIIQNAGQTC-SAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE 294
Query: 562 ------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP-------------------- 595
+ LD++ + +A++ GAR++ GG+ +
Sbjct: 295 DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSR 354
Query: 596 ----------------GDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639
D I AN T+YGL +G++T D ++A+ ++ +G VF+N
Sbjct: 355 LAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVN 414
Query: 640 TYNKT-DVAAPFGGFKQSGFGK 660
Y + PFGG K+SG G+
Sbjct: 415 NYGAGGGIELPFGGVKKSGHGR 436
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-118
Identities = 168/465 (36%), Positives = 260/465 (55%), Gaps = 64/465 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
FI+GEFV S G + E ++PA + SV + DVD AA AA++AF+ W+ L A +
Sbjct: 3 HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK-RWAELKAAE 61
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWC-DKILGS 371
R + K+ADL+EQ+ +E+A +E LD G + V + + +++FA C + + G
Sbjct: 62 RKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMDGR 120
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
T P+ +++ +T R P+G GLITPWN P M+ +WK+AP LA GNTVV+KP+E SP
Sbjct: 121 TYPV-----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSP 175
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTA +LAE++ AG P GV N++ G G G+A+ H ++ V FTG T TG IM++ A
Sbjct: 176 LTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA 235
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
++ LK+ S+ELGGKSP+++FDD +L++A+ + +F GE C ++ R+ V +I + F
Sbjct: 236 DT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDF 294
Query: 552 LEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--- 593
+EK+V TEV + H HL K++ Y E A+ EGA +L+GG+R
Sbjct: 295 VEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFR 354
Query: 594 --RPGD---------VDA--------------------------VIKRANSTEYGLASGI 616
G A I++AN T YGLA +
Sbjct: 355 GEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYV 414
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+T+D+ +A +++G +++N+ N + PFGG K SG G++
Sbjct: 415 WTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGRE 459
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 360 bits (926), Expect = e-117
Identities = 172/455 (37%), Positives = 248/455 (54%), Gaps = 55/455 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
+INGEFV S G +++ +NPA + +V A ++D D A AAE A + W RL A +R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK-AWERLPAIER 59
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+ KLADL+ +N +ELA + + G +LA + V + D Y A W +I G I
Sbjct: 60 AAYLRKLADLIRENADELAKLIVEEQGKTLSLA-RVEVEFTADYIDYMAEWARRIEGEII 118
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
P RPN N F + PIGV I PWN+P +++ K+AP L GNT+V+KPSE +PL
Sbjct: 119 P--SDRPNENI-FIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLN 175
Query: 434 ALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493
AL+ AEL AG P GV+NI+ G G+V G+A+ H K+ + TGST G KIM++AAE
Sbjct: 176 ALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE- 234
Query: 494 NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLE 553
N+ KVSLELGGK+P ++ D +LD AV+ + N G+ C A R++V +IYD F+E
Sbjct: 235 NITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFME 294
Query: 554 KVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD-RPG- 596
K+V ++K + ++A LDK+ + E+A GA LL GGKR + G
Sbjct: 295 KLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGY 354
Query: 597 --------------------------------DVDAVIKRANSTEYGLASGIFTSDINKA 624
+D I+ AN +EYGL S I+T ++N A
Sbjct: 355 FYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTA 414
Query: 625 MYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
M ++++ G +IN N + G+K+SG G
Sbjct: 415 MRATNELEFGETYINRENFEAMQGFHAGWKKSGLG 449
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 360 bits (927), Expect = e-117
Identities = 163/485 (33%), Positives = 255/485 (52%), Gaps = 66/485 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
FI+G V ++ NPA E I SV A DVD A +A +AF W++ + +
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAE 61
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
RG ++ +LADL+EQ+ EELA +E+L SG L+ VG S + +YFAGW KI G T
Sbjct: 62 RGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGET 121
Query: 373 IPIAHARPN-SNFT-FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
+ + +T FT+REP+GV I PWN+ +M+ WK+ LA G T+V+KPSE +
Sbjct: 122 LAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFT 181
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLT L++AEL+ AG P GV+N++ G GAV G + H + KV FTGS TG KI + A
Sbjct: 182 PLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQA 240
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A S+L +V+LELGGK+ D ++D V + F ++G+ C + R +V + +D
Sbjct: 241 A-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDE 299
Query: 551 FLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP 595
+ K+ + + ++ H DK+ Y + A++EG ++ GG+ L
Sbjct: 300 LVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGE 359
Query: 596 G---------------------------------DVDAVIKRANSTEYGLASGIFTSDIN 622
G D + +I+ N T +GL + ++T++++
Sbjct: 360 GYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLS 419
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682
KA+ ++ +I++GTV++N + D A PFGG KQSG G++ G+ FI+
Sbjct: 420 KALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREF--------------GSAFID 465
Query: 683 TYNKT 687
Y +
Sbjct: 466 DYTEL 470
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-117
Identities = 174/447 (38%), Positives = 244/447 (54%), Gaps = 65/447 (14%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKE 329
+PA+ + +DVD A AA KAF+ G W R+S +R ++ K+ADL+ +E
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSN-----F 384
LA IE+L+SG + A + + + D W+Y A L T+ H +N
Sbjct: 62 RLALIETLESGKPISQA-RGEIEGAADLWRYAAS-----LARTL---HGDSYNNLGDDML 112
Query: 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444
REPIGV G+ITPWN+P ++LS K+ LAAG TVV+KPSE + T L LAEL + A
Sbjct: 113 GLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA 172
Query: 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504
G P GV+NI+ G GA G+A+++H + V FTGST G I +AA NLKKVSLELGG
Sbjct: 173 GLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGG 231
Query: 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV-------- 556
K+P ++F D +LD A + GV+FN GE C S R+ V +I DAF+ VV
Sbjct: 232 KNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRV 291
Query: 557 -------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-RPG------------ 596
T+V + ++A L K+ DY + ++EGA LL+GG+RL G
Sbjct: 292 GDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVT 351
Query: 597 ---------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGT 635
VD I AN T YGL++G+++ DI+ A+ +I +GT
Sbjct: 352 PDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGT 411
Query: 636 VFINTYNKTDVAAPFGGFKQSGFGKDL 662
V++NT+ PFGGFKQSG G++L
Sbjct: 412 VWVNTFLDGSPELPFGGFKQSGIGREL 438
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-116
Identities = 157/463 (33%), Positives = 231/463 (49%), Gaps = 61/463 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLSAR 311
LFI G +V G +++ ++PA E + V A DVD A AA +AF G W RLS
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ +LAD +E +ELA + + ++G + + + +Y+A L
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAA-----LAR 115
Query: 372 TIPIAHARPNSNF--TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
P RP S +REP+GV I PWN PL + + K+AP LAAG TVV+KPS
Sbjct: 116 DFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPE 175
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
+PL A LAE + AG P GV+N++P GE + +H + KV FTGST G +I
Sbjct: 176 TPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
E L +V+LELGGKS ++ DD +LD AV + N G+ C++ RI V + YD
Sbjct: 235 CGE-RLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYD 293
Query: 550 AFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR--- 591
+E + V + +++ Y K ++EGARL+ GG R
Sbjct: 294 EVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAG 353
Query: 592 LDR-----P---GDVD--AVIKR----------------------ANSTEYGLASGIFTS 619
LDR P DVD I + AN ++YGL+ ++T+
Sbjct: 354 LDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTA 413
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
D+ + + +I +GTV +N + + D APFGGFKQSG G++
Sbjct: 414 DVERGLAVARRIRTGTVGVNGF-RLDFGAPFGGFKQSGIGREG 455
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-116
Identities = 170/468 (36%), Positives = 248/468 (52%), Gaps = 66/468 (14%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
FINGE+V G + NP N +C + + ++DVD+A AA +AF+ W + S
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT-WGKTSVA 60
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R +++ K+AD +E+N E LA E+LD+G L + ++ID ++YFAG GS
Sbjct: 61 ERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGS 120
Query: 372 TIPIAHARPNSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
I + + ++ EP+GV G I PWN+PL+M +WK+AP LAAGNTVV+KP+ +
Sbjct: 121 LSEI-----DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQT 175
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PL+ L L EL + PKGV+N++ G G+ G+ ++ H +I K+ FTGST G IM+ A
Sbjct: 176 PLSILVLMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYA 234
Query: 491 AESNLKKVSLELGGKSPLVIFDD-----YNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
AE NL V+LELGGKSP + FDD + D G FN+GE C R V
Sbjct: 235 AE-NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQE 293
Query: 546 NIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGK 590
+IYD F+E+ V + + K L+K++ Y + K EGA +L GG+
Sbjct: 294 SIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGE 353
Query: 591 RLDRPG-------------------------------------DVDAVIKRANSTEYGLA 613
RL G D + I AN TEYGL
Sbjct: 354 RLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLG 413
Query: 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
G++T DIN+A+ I +G V++N Y++ APFGG+K+SG G++
Sbjct: 414 GGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRE 461
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 354 bits (910), Expect = e-115
Identities = 156/438 (35%), Positives = 226/438 (51%), Gaps = 61/438 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
INPA S +A+ +D A AA+ AF G WS +R + +AD +E N EE
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG-WSATPLEERRAALLAIADAIEANAEE 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNF-TFTKR 389
LA + +L+ G A + VG ++ +Y A +P + +R
Sbjct: 61 LARLLTLEQGKPLAEA-QFEVGGAVAWLRYTAS-------LDLPDEVIEDDDTRRVELRR 112
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
+P+GV I PWN+PL++ +WK+AP L AGNTVV+KPS +PL LKL EL + P G
Sbjct: 113 KPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGEL-AQEVLPPG 171
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
V+N++ G + G A++ H IRK+ FTGST TG K+M SAA+ LK+V+LELGG +
Sbjct: 172 VLNVVSGGDEL-GPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAI 229
Query: 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562
+ D ++D G F N G+ C + R++V +IYD F E +V K
Sbjct: 230 VLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLD 289
Query: 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
+K DK+ + E AK++GA++L GG+ LD PG
Sbjct: 290 PGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIV 349
Query: 597 ---------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
D D VI RAN +EYGL + +++SD+ +A ++++GTV+INT+
Sbjct: 350 DEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTH 409
Query: 642 NKTDVAAPFGGFKQSGFG 659
D APFGG KQSG G
Sbjct: 410 GALDPDAPFGGHKQSGIG 427
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-114
Identities = 163/443 (36%), Positives = 250/443 (56%), Gaps = 55/443 (12%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
INPA E+TI + A ++DVD A AA +AF W + + +R + +A+ + + +EE
Sbjct: 2 INPATEATIGEIPAATAEDVDAAVRAARRAFPR-WKKTTGAERAKYLRAIAEGVRERREE 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFT-FTKR 389
LA +E+ D+G A V ++Y+A ++ L + A P+ +F +R
Sbjct: 61 LAELEARDNGKPLDEAA-WDVDDVAGCFEYYADLAEQ-LDAKAERAVPLPSEDFKARVRR 118
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP+GV GLITPWN+PL+M +WK+AP LAAG TVV+KPSE++ LT L+LAE++ AG P G
Sbjct: 119 EPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPG 178
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
V+N++ GTG G ++ H I K+ FTGST TG ++M++AA+ ++K VSLELGGKSP++
Sbjct: 179 VLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPII 237
Query: 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN------ 563
+FDD +L+KAV +M G F+N G+ C + R+ V +I DAFLE++ T + +
Sbjct: 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 564 ---------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG-----------DV----- 598
+A +K++ + + K EGARLL GG+R DV
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357
Query: 599 -------------------DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639
D I AN +EYGLA+ + + D + + +++G V+IN
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417
Query: 640 TYNKTDVAAPFGGFKQSGFGKDL 662
AP+GG+K+SG G++L
Sbjct: 418 CSQPCFPQAPWGGYKRSGIGREL 440
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 344 bits (884), Expect = e-111
Identities = 166/462 (35%), Positives = 250/462 (54%), Gaps = 64/462 (13%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANS-DDVDIAALAAEKAFEGEWSRLSARD 312
+I GE+V+S G + + NPA+ + ++ DVD A AA +AF EW ++ A
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAF-PEWRKVPAPR 60
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R +F+ A+L+++ KEELA + + + G + V +ID +Y AG ++ G T
Sbjct: 61 RAEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRRLFGET 119
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
+P PN T+R+PIGV LITPWN+P+ + SWK+ P L GNTVV KP+E +P
Sbjct: 120 VP--SELPN-KDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPA 176
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
ALKL EL AG P GV+N++ G G GEA+ +H + V FTGST G +I ++ A
Sbjct: 177 CALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR 236
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
N K+V+LE+GGK+P+++ DD +LD A+ ++ F G+ C + R+ V ++YD FL
Sbjct: 237 PN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFL 295
Query: 553 EKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--- 594
++ V K++ ++A L+K+++Y E K EGA LL+GG+RL
Sbjct: 296 KRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGY 355
Query: 595 -------P------------------GDVDAVIKR---------ANSTEYGLASGIFTSD 620
P G V A+I+ AN TEYGL+S I+T D
Sbjct: 356 EKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTED 415
Query: 621 INKAMYFVDKIDSGTVFINTYNKT---DVAAPFGGFKQSGFG 659
+NKA +++G ++N T +V PFGG K+SG G
Sbjct: 416 VNKAFRARRDLEAGITYVN--APTIGAEVHLPFGGVKKSGNG 455
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 341 bits (876), Expect = e-109
Identities = 170/479 (35%), Positives = 250/479 (52%), Gaps = 69/479 (14%)
Query: 245 MDVSFPN-QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE- 302
M + P QLFI GE+ V G + +NPA E TI + A ++DVD A AA KAF+
Sbjct: 1 MAIPVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKR 60
Query: 303 ---GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDT-- 357
+W+R + R + +A + + K ELA +E+LD G A +D
Sbjct: 61 NKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-----WDMDDVA 115
Query: 358 --WKYFAGWCDKILG-STIPIAHARPNSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMA 413
++Y+A + + P++ P F + +EP+GV GLITPWNYPL+M +WK+A
Sbjct: 116 GCFEYYADLAEALDAKQKAPVS--LPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVA 173
Query: 414 PCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRK 473
P LAAG T V+KPSE++ +T L+LA++ G P GV+N++ G G G ++ H + K
Sbjct: 174 PALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDK 233
Query: 474 VGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGE 533
+ FTGST TG KIM +AA+ +K VSLELGGKSP+++FDD +LDKAV +M G F+ G+
Sbjct: 234 IAFTGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQ 292
Query: 534 NCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKA 578
C + R+ V I FLEK+V K + + +K++ + A
Sbjct: 293 ICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTA 352
Query: 579 KSEGARLLIGGKRLD-----------RPGDV------------------------DAVIK 603
KSEGA +L GGKR + DV D I+
Sbjct: 353 KSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIE 412
Query: 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
AN + YGLA + ++D+ + + +G V+IN AP+GG K+SGFG++L
Sbjct: 413 LANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGREL 471
|
Length = 503 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-108
Identities = 173/463 (37%), Positives = 259/463 (55%), Gaps = 61/463 (13%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
LFINGE+V G +++ NPAN T+ + A DVD A AA++AF+ W + +
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK-TWRKTTVA 60
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R +++ K+AD++++NKE LA +E+LD+G + ++ D ++YFAG GS
Sbjct: 61 ERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS 120
Query: 372 TIPIAHARPNSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
I + + + REPIGV G I PWN+P +M +WK+AP LAAGNTVV+KPS +
Sbjct: 121 ANMI-----DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTT 175
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
L+ L+LA++ ++ PKGV+NI+ G G+ +GE + H + K+ FTGST G + +A
Sbjct: 176 SLSLLELAKI-IQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAA 234
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A+ L +LELGGKS +IFDD N DKA+ + G+ FN+G+ C + RIFV IYD
Sbjct: 235 AK-KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDE 293
Query: 551 FLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP 595
F+ K+ + + + +K LDK++ Y + AK EGA++L GG RL
Sbjct: 294 FVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTEN 353
Query: 596 G-------------------------------------DVDAVIKRANSTEYGLASGIFT 618
G D VI AN +EYGL G+FT
Sbjct: 354 GLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFT 413
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
DIN+A+ +++G V++NTYN+ APFGG+K+SG G++
Sbjct: 414 KDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRE 456
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 334 bits (859), Expect = e-108
Identities = 158/442 (35%), Positives = 239/442 (54%), Gaps = 56/442 (12%)
Query: 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327
+E I+P + I V +A+ +DV+ A AA++ + E L A +R ++ + A L+E+
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK-EMKSLPAYERAEILERAAQLLEER 59
Query: 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI-AHARPNSNFTF 386
+EE A +L++G A K V +I+T + A ++ G TIP A F
Sbjct: 60 REEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGF 118
Query: 387 TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF 446
T REPIGV ITP+N+PL +++ K+ P +AAGN VV+KP+ +PL+ALKLAEL + AG
Sbjct: 119 TIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGL 178
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
PKG +N++ G+G G+A+ ++R + FTGS G I + A LKKV+LELG +
Sbjct: 179 PKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSNA 235
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK----- 561
+++ D +L+KAV + G F N G+ CIS RIFV +IYD FLE+ V KK
Sbjct: 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGD 295
Query: 562 ----------MNHKAHLDKLIDYCEKAKSEGARLLIGGKR-------------------- 591
M +A +++ ++ E+A GARLL GGKR
Sbjct: 296 PLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVV 355
Query: 592 ----------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN-- 639
L+ +D I AN + YGL +G+FT+D+ KA+ +++ G V IN
Sbjct: 356 CEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDS 415
Query: 640 -TYNKTDVAAPFGGFKQSGFGK 660
T+ + D P+GG K+SG G+
Sbjct: 416 STF-RVD-HMPYGGVKESGTGR 435
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 333 bits (856), Expect = e-107
Identities = 163/449 (36%), Positives = 237/449 (52%), Gaps = 69/449 (15%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
INPA I V + + DVD A AA+ AF EW+ AR+RG L+ ++AD +E EE
Sbjct: 2 INPATGQVIGEVPRSRAADVDRAVAAAKAAF-PEWAATPARERGKLLARIADALEARSEE 60
Query: 331 LATIESLDSGAVYTLALKTH----VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTF 386
LA + +L++G AL+T + D ++YF G ++ G T+P P+ T+
Sbjct: 61 LARLLALETGN----ALRTQARPEAAVLADLFRYFGGLAGELKGETLP---FGPDV-LTY 112
Query: 387 TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF 446
T REP+GV G I PWN PLM+ + K+AP L AGNTVV+K +E +PL L LAE+ +
Sbjct: 113 TVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-L 171
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
P GV+N++ G G G A+ H + KV FTGST G I ++AA+ L VSLELGGKS
Sbjct: 172 PAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKS 230
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNK-GENCISAGRIFVDSNIYDAFLEKVVTEVKKMN-- 563
P+++F D +LD AV ++ G+ F + G++C + R+FV +IYDAFLEK+V ++ K+
Sbjct: 231 PMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIG 290
Query: 564 -------------HKAHLDKLIDYCEKAKSE-GARLLIGGK------------------- 590
+ K+ Y + S GA +L GG
Sbjct: 291 DPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFS 350
Query: 591 ------RLDRP------------GDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKID 632
RL R D D VI AN + YGLA+ ++T D+ +A+ ++
Sbjct: 351 GVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALE 410
Query: 633 SGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+G V +N +GGFKQSG G++
Sbjct: 411 AGWVQVNQGGGQQPGQSYGGFKQSGLGRE 439
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-107
Identities = 160/472 (33%), Positives = 260/472 (55%), Gaps = 58/472 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLS 309
N+LFINGE+ + + E ++P ++ + + S D+D A AA FE G+WS S
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
R ++ KLADLME + EELA +E+LD+G +L+ + + +++A DK+
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
G + + REP+GV I PWN+PL++ WK+ P LAAGN+V++KPSE
Sbjct: 140 GEVATTS----SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEK 195
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
SPL+A++LA L+ AG P GV+N++ G G G+A+S+H I + FTGST TG +++K
Sbjct: 196 SPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255
Query: 490 AAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A +SN+K+V LE GGKS ++F D +L +A + G+F+N+G+ CI+ R+ ++ +I
Sbjct: 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA 315
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D FL + + + AH D + + + +S+G +LL+ G+
Sbjct: 316 DEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAG 374
Query: 594 RPG--------DVDA--------------VIKR----------ANSTEYGLASGIFTSDI 621
DVD V+ R AN ++YGL + ++T D+
Sbjct: 375 LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDL 434
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDK 673
++A ++ +G+VF+N YN D+ PFGG+KQSG G+D K+++ ++K
Sbjct: 435 SRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRD----KSLHALEK 482
|
Length = 494 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 330 bits (847), Expect = e-106
Identities = 158/456 (34%), Positives = 241/456 (52%), Gaps = 61/456 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
INPA + V A++ DVD A AA AF EW + +R ++ +LA + ++ EE
Sbjct: 2 INPATGQVLARVPAASAADVDRAVAAARAAFP-EWRATTPLERARMLRELATRLREHAEE 60
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
LA I++LD G + A+ V ++ YFAG ++ G TIP+ N +T RE
Sbjct: 61 LALIDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTELKGETIPVGGR----NLHYTLRE 115
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P GV I +N+PLM + K+A LAAGNTVV+KP E +PL+AL+LAEL R P GV
Sbjct: 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAEL-AREVLPPGV 174
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
NILPG GA G A+ +H ++++ GS TG IM++AAE +K V+LELGGK+ L++
Sbjct: 175 FNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIV 233
Query: 511 FDDYNLDKAVRMSMGGVFFN-KGENCISAGRIFVDSNIYDAFLEKVVTEVKK-------- 561
F D + + A ++ G+ F G++C S R+FV +IYD L +VV V
Sbjct: 234 FPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTD 293
Query: 562 -------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
+ + D+++ Y + AK EGARL+ GG R + P
Sbjct: 294 PATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPG 353
Query: 597 -------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
D ++ +AN EYGL + I+T+DI++A ++++G V+
Sbjct: 354 MRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVW 413
Query: 638 INTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDK 673
IN ++ + APFGG K SG G++ + + + + +
Sbjct: 414 INGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQE 449
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 330 bits (847), Expect = e-105
Identities = 151/457 (33%), Positives = 235/457 (51%), Gaps = 65/457 (14%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
FING++V S INPA + SV A +DVD A AA AFE WS L
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES-WSALPGHV 82
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R ++++A +++++ A +ESLD+G + + + + + AGW
Sbjct: 83 RARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL----- 137
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
+ +P+GV G I PWN+PL+ML+WK+ P LA GNTVV+KP+E +PL
Sbjct: 138 ---------LDTELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPL 188
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
TAL AE+ AG P GV+NI+ G G+ G A++ H + KV FTGST G + ++ A
Sbjct: 189 TALLFAEICAEAGLPPGVLNIVTGNGS-FGSALANHPGVDKVAFTGSTEVGRALRRATAG 247
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+ KK+SLELGGKSP ++FDD +LD AV + ++FN+G+ C + R+ V ++ + +
Sbjct: 248 TG-KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELI 306
Query: 553 EKVVTEVKKMNHKAHLDKLID---------------YCEKAKSEGARL------------ 585
K+ + + LDK ID E+ ++EGA +
Sbjct: 307 RKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGP 366
Query: 586 -----LIGG----KRLDR---PGDVDAV---------IKRANSTEYGLASGIFTSDINKA 624
L R+ + G V V + AN+T YGLA+ +++ +++ A
Sbjct: 367 FYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLA 426
Query: 625 MYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+ + +G V+IN +N D AA FGG+++SGFG++
Sbjct: 427 LEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGRE 463
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = e-102
Identities = 160/462 (34%), Positives = 241/462 (52%), Gaps = 56/462 (12%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
Q I G++ ++ G + NPA I +V + + A +A AF WS+L
Sbjct: 23 LRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP-SWSKL 81
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A +R ++ + DL+ NKE+LA + +L+ G A+ V +YFA ++
Sbjct: 82 TASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRV 140
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G IP ++P+GV G ITPWN+PL M++ K+ P LAAG TVV+KPSE
Sbjct: 141 YGDIIPSPFPDRR---LLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSE 197
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
++PLTAL AEL+++AG P GV+N++ G G+A+ K+RK+ FTGST G K+M
Sbjct: 198 LTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMA 257
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
AA + +K+VSLELGG +P ++FDD +LD AV+ ++ F N G+ C+ A RI V IY
Sbjct: 258 GAAAT-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY 316
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F E V+K+ ++A + K+ + + A S+GA++L+GGKR
Sbjct: 317 DKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHS 376
Query: 594 RPG----------------------------------DVDAVIKRANSTEYGLASGIFTS 619
G + +A I AN TE GLA+ IFT
Sbjct: 377 LGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA-IAIANDTEAGLAAYIFTR 435
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
D+ +A + ++ G V +N + APFGG KQSG G++
Sbjct: 436 DLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGRE 477
|
Length = 498 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 321 bits (824), Expect = e-102
Identities = 147/446 (32%), Positives = 216/446 (48%), Gaps = 54/446 (12%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLSARDRGHLMFKLADLMEQNKE 329
INPA E I + A + DVD A AA +AF G+WS A +R + +L + +E KE
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWST-DAEERARCLRQLHEALEARKE 60
Query: 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS-TIPIAHARPNSNFTFTK 388
EL + + GA A V I +YFA D +P+ R +
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 389 REPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPK 448
REP+GV ITPWN+P + K+AP LAAGNTVV+KP+ +PL+AL L E+ P
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPA 180
Query: 449 GVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508
GV+N++ G+ GEA++ ++ V FTGST G +IM AA LK+V LELGGKS
Sbjct: 181 GVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKSAN 239
Query: 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNH---- 564
++ DD +L A ++G N G+ C R+ V + YD +E + + +
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPA 299
Query: 565 -----------KAHLDKLIDYCEKAKSEGARLLIGGKRLDR--PG--------------- 596
A D++ Y + + EGARL+ GG R G
Sbjct: 300 DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDM 359
Query: 597 ------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
D D ++ AN ++YGL+ G++++D+++A +I +G+V I
Sbjct: 360 RIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGI 419
Query: 639 NTYNKTDVAAPFGGFKQSGFGKDLDI 664
N APFGG+KQSG G++ I
Sbjct: 420 NGGGGYGPDAPFGGYKQSGLGRENGI 445
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 321 bits (824), Expect = e-102
Identities = 153/443 (34%), Positives = 240/443 (54%), Gaps = 53/443 (11%)
Query: 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327
+E NPAN I +V + ++V A AEKA + S L A R ++ K+A+L+E+
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD-VMSNLPAYKRYKILMKVAELIERR 59
Query: 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSN-FTF 386
KEELA + +++ G + + V +I +K A + G TIP+ N F
Sbjct: 60 KEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAF 118
Query: 387 TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF 446
T REPIGV G ITP+N+P + + K+AP +A GN+VV+KPS +PLTA++LA++ AG
Sbjct: 119 TVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGL 178
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
P GVIN++ G G+ G+ I + K+ + FTGST G+ I A KKV+LELGG
Sbjct: 179 PPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAG-GTGKKVALELGGSD 237
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN--- 563
P+++ D +L++AV +++ G F N G+ C + RI V+ +YD FL+ +V +VKK+
Sbjct: 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGD 297
Query: 564 ------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD------------------ 593
++++ + A +G ++L GGKR +
Sbjct: 298 PLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIV 357
Query: 594 -------------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN- 639
+ D + ++ ANSTEYGL + +FT+DIN+A+ ++++G V IN
Sbjct: 358 MKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVIND 417
Query: 640 -TYNKTDVAAPFGGFKQSGFGKD 661
T + D PFGGFK+SG G++
Sbjct: 418 STRFRWD-NLPFGGFKKSGIGRE 439
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = 1e-97
Identities = 144/423 (34%), Positives = 230/423 (54%), Gaps = 61/423 (14%)
Query: 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLA-L 347
DVD A AA A + W+ ++R ++ K A+++E+ ++E+A +SG+ A
Sbjct: 1 DVDRAYAAAAAAQK-AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF 59
Query: 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407
+ ++I + AG + G +P + +R P+GV G+I+P+N+PL+
Sbjct: 60 EVGAAIAI--LREAAGLPRRPEGEILPSDVP---GKESMVRRVPLGVVGVISPFNFPLI- 113
Query: 408 LSWK-MAPCLAAGNTVVMKPSEVSPLT-ALKLAELSVRAGFPKGVINILPGTGAVTGEAI 465
L+ + +AP LA GN VV+KP +P+T L +AE+ AG PKGV+N++PG G+ G+A+
Sbjct: 114 LAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDAL 173
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG 525
+H ++R + FTGST G I + A +LKKV+LELGG +PL++ DD +LD AV +
Sbjct: 174 VEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAF 232
Query: 526 GVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------------NHKAHLD 569
G F ++G+ C++AGRI V ++YD F+EK+V + K + N + +D
Sbjct: 233 GAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQ-VD 291
Query: 570 KLIDYCEKAKSEGARLLIGGKRLD---RP---GDVDA----------------------- 600
++ E A + GARLL GG +P DV
Sbjct: 292 RVHAIVEDAVAAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDE 351
Query: 601 -VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN--TYNKTDVAAPFGGFKQSG 657
++ AN TEYGL++ +FT D+ +AM F +++++G V IN T N + PFGG K SG
Sbjct: 352 EAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVND-EPHVPFGGVKASG 410
Query: 658 FGK 660
G+
Sbjct: 411 GGR 413
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 306 bits (786), Expect = 1e-96
Identities = 163/467 (34%), Positives = 235/467 (50%), Gaps = 69/467 (14%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
FI GE+V V G + I P C V + ++D+++A AA A E W + S +R
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA-WGKTSVAER 62
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+++ K+AD ME N E LA E+ D+G L + ++ID ++YFAG GS
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS 122
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
I + + EP+GV G I PWN+PL+M +WK+AP LAAGN VV+KP+E +P +
Sbjct: 123 EI----DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPAS 178
Query: 434 ALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493
L L EL + P GV+N++ G G G+ ++ +I KV FTG T TG IM+ A+E
Sbjct: 179 ILVLMEL-IGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE- 236
Query: 494 NLKKVSLELGGKSPLVIF------DDYNLDKAVRMSMGGVFF--NKGENCISAGRIFVDS 545
N+ V+LELGGKSP + F DD DKA+ G V F N+GE C R +
Sbjct: 237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALE---GFVMFALNQGEVCTCPSRALIQE 293
Query: 546 NIYDAFLEKVVTEVK--KMNH-------------KAHLDKLIDYCEKAKSEGARLLIGGK 590
+IYD F+E+ + VK K + L+K++ Y + K EGA +L GG+
Sbjct: 294 SIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGE 353
Query: 591 RLDRPG------------------------------------DVDAVIKRANSTEYGLAS 614
R + G D + ++ AN T YGL +
Sbjct: 354 RNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGA 413
Query: 615 GIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
G++T D N A I +G V+ N Y+ A FGG+KQSG G++
Sbjct: 414 GVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRE 460
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 306 bits (787), Expect = 1e-96
Identities = 144/463 (31%), Positives = 224/463 (48%), Gaps = 65/463 (14%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
I GE+V S GG + NPAN I V A+ +DV+ A AA +AF EW ++ A R
Sbjct: 2 VIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAF-KEWRKVPAPRR 59
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
G ++ ++ + + + KE L + SL+ G + L V ID Y G + G TI
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTI 118
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
P RP + + P+GV G+IT +N+P+ + W A L GNTVV KPSE +PLT
Sbjct: 119 P--SERPG-HRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLT 175
Query: 434 ALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
A+ + ++ G P GV+N++ G G GE + ++ V FTGST G ++ ++
Sbjct: 176 AIAVTKILAEVLEKNGLPPGVVNLVTGGGDG-GELLVHDPRVPLVSFTGSTEVGRRVGET 234
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
A +V LELGG + +++ DD +LD AVR + G+ C + R+ V ++YD
Sbjct: 235 VARRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYD 293
Query: 550 AFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR 594
FLE++V K+ + ++A ++K ++ E AKS+G +L GGKR+D
Sbjct: 294 EFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG 353
Query: 595 --PG---------------------------------DVDAVIKRANSTEYGLASGIFTS 619
PG ++ I N GL+S IFT
Sbjct: 354 GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTE 413
Query: 620 DINKAMYFVDK--IDSGTVFINT-YNKTDVAAPFGGFKQSGFG 659
D+ +A ++ D G V +N + ++ FGG K++G G
Sbjct: 414 DLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG 456
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 303 bits (777), Expect = 1e-95
Identities = 156/440 (35%), Positives = 232/440 (52%), Gaps = 54/440 (12%)
Query: 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327
+ +NPA+ S V + + D + A AA AF W+ + +R ++ K A++ME+
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPA-WAATTPSERERILLKAAEIMERR 59
Query: 328 KEELATIESLDSGAVYTLAL-KTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTF 386
++L + + G+ Y A +T + + AG C ++ G T+P + +
Sbjct: 60 ADDLIDLLIDEGGSTYGKAWFETTFTPEL--LRAAAGECRRVRGETLP---SDSPGTVSM 114
Query: 387 TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF 446
+ R P+GV ITP+NYPL++ + K+A LAAGNTVV+KPSE +P+ LK+AE+ AG
Sbjct: 115 SVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGL 174
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
PKGV N++ G GA G+ + ++R V FTGST G +I A +LKK++LELGGK+
Sbjct: 175 PKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREI-AEKAGRHLKKITLELGGKN 233
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKA 566
PL++ D +LD AVR + G F ++G+ C+SA RI V+ +YD F++K V K+
Sbjct: 234 PLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGD 293
Query: 567 HLDK------LID---------YCEKAKSEGARLLIGGKRLDR---P---GDV--DAVIK 603
D LI E A ++GA+LL GGK P DV D I
Sbjct: 294 PRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIF 353
Query: 604 R----------------------ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
R AN TEYGL++ I T+D+ +A ++++SG V IN
Sbjct: 354 REETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDP 413
Query: 642 NKTDVA-APFGGFKQSGFGK 660
D A PFGG K SGFG+
Sbjct: 414 TILDEAHVPFGGVKASGFGR 433
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 2e-93
Identities = 156/440 (35%), Positives = 239/440 (54%), Gaps = 57/440 (12%)
Query: 272 NPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331
NPA I SV D+ + A AA +AF+ W +A++R L+ K +LM +NK++L
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFK-TWRATTAKERSSLLRKWYNLMMENKDDL 61
Query: 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREP 391
A + +L++G A K + + ++FA ++ G TIP + + ++P
Sbjct: 62 ARLITLENGKPLKEA-KGEILYAASFLEWFAEEAKRVYGDTIP---SPQSDKRLIVIKQP 117
Query: 392 IGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVI 451
+GVC ITPWN+P M++ K LAAG TVV+KP+E +PL+AL LA L+ +AG PKGV+
Sbjct: 118 VGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVL 177
Query: 452 NILPGTGAVT-GEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
N++ G+ A G ++ +RK+ FTGST G +MK +A S +KKVS+ELGG +P ++
Sbjct: 178 NVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIV 236
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562
FDD +LD+AV +M F N G+ C+ A R++V IYD F +K+ VKK+
Sbjct: 237 FDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDE 296
Query: 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
N KA ++K+ + A +GA+++ GGKR + G
Sbjct: 297 GVTQGPLINEKA-VEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVS 355
Query: 597 ---------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
D + VI AN TE GLA+ F+ D+++ + ++ G V INT
Sbjct: 356 KEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTG 415
Query: 642 NKTDVAAPFGGFKQSGFGKD 661
++V APFGG KQSG G++
Sbjct: 416 LISNVVAPFGGVKQSGLGRE 435
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 296 bits (759), Expect = 5e-93
Identities = 139/441 (31%), Positives = 223/441 (50%), Gaps = 52/441 (11%)
Query: 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327
++ NP + I V + D + A A E L +R ++ + ADL+++
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAEN-RRALPPHERMAILERAADLLKKR 59
Query: 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI-AHARPNSNFTF 386
EE A I + + G A V +IDT + A ++I G IP+ A ++ +
Sbjct: 60 AEEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAW 118
Query: 387 TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF 446
T REP+GV ITP+N+PL +++ K+AP +A G VV+KP+ +PL+AL+LA++ V AG
Sbjct: 119 TIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGV 178
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
P+GV+ ++ G V G+A + ++ + FTGS G + +A K+++LELGG +
Sbjct: 179 PEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG---GKRIALELGGNA 235
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN--- 563
P+++ D +LD A+ G F++ G+ CIS RI+V +YD F+E V VKK+
Sbjct: 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295
Query: 564 ------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD------------------ 593
+ +++ + E+A GARLL GG+R
Sbjct: 296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLS 355
Query: 594 ------------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
R D + I+ ANST+YGL +GIFT D+N A +K++ G V +N
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415
Query: 642 NKTDV-AAPFGGFKQSGFGKD 661
+ PFGG K+SG G++
Sbjct: 416 SAFRTDWMPFGGVKESGVGRE 436
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 7e-93
Identities = 144/462 (31%), Positives = 225/462 (48%), Gaps = 57/462 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
FING FV S G + INP + I V A + +VD A AA A +G W +++ +R
Sbjct: 4 FINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAER 61
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
L++ +AD +E+ ++ E D+G +LA + ++ FA
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
+A + R+P+GV G+I+PWN PL++++WK+ P LA GNTVV+KPSE +P T
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181
Query: 434 ALKLAELSVRAGFPKGVINILPGTG-AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
A L E+ G PKGV N++ G G GE +++H + + FTG T TG IMK+AA+
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+K VS ELGGK+ ++F D + D AV + F N G+ C+ R++V+ I+D F+
Sbjct: 242 G-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFV 300
Query: 553 EKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGD 597
+ + + H DK++ Y A EGA ++ GG D
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDA 360
Query: 598 VDA--------------------------------------VIKRANSTEYGLASGIFTS 619
+ VI AN T YGLA+ ++T
Sbjct: 361 LAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTE 420
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
D+++A +++ G V++N++ D+ PFGG K SG G++
Sbjct: 421 DLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGRE 462
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 294 bits (755), Expect = 3e-92
Identities = 158/463 (34%), Positives = 246/463 (53%), Gaps = 56/463 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
++L INGE V+ G NPA I + A+++ VD A AA+ AF EW + +
Sbjct: 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAF-AEWGQTTP 59
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+ R + KLAD++E+N + A +ES + G + +D +++FAG + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
A + + +R+P+GV I PWNYPLMM +WK+AP LAAGN VV+KPSE++
Sbjct: 120 LA---AGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 176
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLTALKLAEL+ + FP GV+NIL G G G+ ++ H K+R V TGS TG I+
Sbjct: 177 PLTALKLAELA-KDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHT 235
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A S +K+ +ELGGK+P+++FDD ++D V F+N G++C +A RI+ IYD
Sbjct: 236 APS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDT 294
Query: 551 FLEKV---------------VTEVKKMNHKAHLDKLIDYCEKAKSEG-ARLLIGGKRLDR 594
+EK+ TE+ ++ AHL++++ E+AK+ G +++ GG++
Sbjct: 295 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKG 354
Query: 595 PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
G D + V+ AN ++YGLAS ++T D+
Sbjct: 355 NGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDV 414
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDI 664
+A ++ G ++NT+ P GG K SG+GKD+ +
Sbjct: 415 GRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 457
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 276 bits (707), Expect = 2e-85
Identities = 133/444 (29%), Positives = 205/444 (46%), Gaps = 65/444 (14%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
NPA + V + + +V A A A + W+ L R + + + + +E
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAA-QRAWAALGVEGRAQRLLRWKRALADHADE 59
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKR- 389
LA + ++G A V ++++ + A ++L P K+
Sbjct: 60 LAELLHAETGKPRADAG-LEVLLALEAIDWAARNAPRVLAP-----RKVPTGLLMPNKKA 113
Query: 390 ----EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG 445
P GV G+I+PWNYPL+ + P LAAGN VV+KPSEV+PL LAE AG
Sbjct: 114 TVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAG 173
Query: 446 FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505
P+GV+ ++ G GA TG A+ + KV FTGS TG K+M +AAE L V LELGGK
Sbjct: 174 PPQGVLQVVTGDGA-TGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGK 230
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK---- 561
P+++ D +L++A ++ G N G+ CIS R++V ++YD F+ ++V + +
Sbjct: 231 DPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPG 290
Query: 562 -----------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG-------------- 596
M LD + + + A ++GA+ L GG R + G
Sbjct: 291 ADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHD 350
Query: 597 -------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
D D I AN + YGL++ +F+ D+ +A ++++G V
Sbjct: 351 MDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS 410
Query: 638 IN--TYNKTDVAAPFGGFKQSGFG 659
IN A PFGG K SG G
Sbjct: 411 INDVLLTAGIPALPFGGVKDSGGG 434
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 3e-85
Identities = 138/419 (32%), Positives = 202/419 (48%), Gaps = 64/419 (15%)
Query: 296 AAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSI 355
A AF W + S +R L+ KLADL+ + K+ELA + +L+ G A + V
Sbjct: 7 RAHAAFL-AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCA 64
Query: 356 DTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM--- 412
+Y+A + L PI + + + EP+GV I PWN+P W++
Sbjct: 65 WICRYYAENAEAFLADE-PIETDAGKA---YVRYEPLGVVLGIMPWNFPF----WQVFRF 116
Query: 413 -APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
AP L AGNTV++K + P AL + EL AGFP+GV L I+ ++
Sbjct: 117 AAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIA-DPRV 175
Query: 472 RKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNK 531
R V TGS G + A + NLKK LELGG P ++ DD +LDKAV+ ++ G N
Sbjct: 176 RGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234
Query: 532 GENCISAGRIFVDSNIYDAFLEKVVTEVKK---------------MNHKAHLDKLIDYCE 576
G++CI+A R V ++YD FLEK V + + K D+L + E
Sbjct: 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVE 294
Query: 577 KAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIK 603
+A + GA LL+GGKR D PG D + I
Sbjct: 295 EAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIA 354
Query: 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
AN + +GL +FT+D+ +A ++++G VFIN K+D PFGG K+SG+G++L
Sbjct: 355 LANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGREL 413
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 272 bits (699), Expect = 2e-84
Identities = 137/422 (32%), Positives = 210/422 (49%), Gaps = 60/422 (14%)
Query: 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348
D D A AA AF WS+ +R ++ K ADL+E ++E ++GA A
Sbjct: 1 DADQAVEAAAAAFP-AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWA-G 58
Query: 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMML 408
+V ++ + A +I+G +IP +P + +EP+GV I PWN P+++
Sbjct: 59 FNVDLAAGMLREAASLITQIIGGSIPSD--KPGTL-AMVVKEPVGVVLGIAPWNAPVILG 115
Query: 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINIL---PGTGAVTGEAI 465
+ +A LAAGNTVV+K SE+SP T + + AG PKGV+N++ P EA+
Sbjct: 116 TRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEAL 175
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG 525
H +RKV FTGST G I ++AA+ +LK V LELGGK+P ++ +D +LD A ++
Sbjct: 176 IAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALF 234
Query: 526 GVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------------NHKAHLDKLI 572
G F N G+ C+S RI V +I D F+EK+ +K+ + +L+
Sbjct: 235 GAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELV 294
Query: 573 DYCEKAKSEGARLLIGGKRLDRPG----------------------------------DV 598
D A S+GA+L++GG + P D
Sbjct: 295 D---DALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDE 351
Query: 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSG 657
+ ++ AN +EYGL++ +FT D+ +A+ +I+SG V IN D P GG K SG
Sbjct: 352 EEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSG 411
Query: 658 FG 659
+G
Sbjct: 412 YG 413
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 273 bits (700), Expect = 3e-84
Identities = 132/443 (29%), Positives = 216/443 (48%), Gaps = 60/443 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLSARDRGHLMFKLADLMEQNKE 329
I+PA I + + + A AA +AF E +W+ R R ++ +LAD E N E
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAE 60
Query: 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKR 389
LA + +L++G + A + + +I +Y+AG G I P +F+ R
Sbjct: 61 RLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEP---EPG-SFSLVLR 115
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAE-LSVRAGFPK 448
EP+GV G+I PWN P+++L +AP LAAG TVV+KP+ + + L+ P
Sbjct: 116 EPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPA 175
Query: 449 GVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508
GV+N+ +G+ + + + FTGST TG IM +AA LK++ LELGGK+P
Sbjct: 176 GVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPC 234
Query: 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV------------ 556
++FDD +LD A+ + G+ C++ R+ V +I D +++
Sbjct: 235 IVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGL 294
Query: 557 ---TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD---------RP-----GDVD 599
+++ + +A++D++ E+A + GA +++ G + RP D D
Sbjct: 295 DPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPD 354
Query: 600 AVI----------------------KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
A I AN T+YGLA+ ++T D+ +AM I +GTV+
Sbjct: 355 ADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVW 414
Query: 638 INTYNKTDVAAPFGGFKQSGFGK 660
IN +NK A GG++QSG G+
Sbjct: 415 INDWNKLFAEAEEGGYRQSGLGR 437
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (691), Expect = 1e-82
Identities = 163/462 (35%), Positives = 251/462 (54%), Gaps = 56/462 (12%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
F Q INGE++++ G ++ NPAN + SV +D+ A AA +A W L
Sbjct: 9 FRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-WRAL 67
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A++R +++ + +LM +++++LA + +L+ G A K + + ++FA +I
Sbjct: 68 TAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRI 126
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP H + + K +PIGV ITPWN+P M++ K P LAAG T+V+KP+
Sbjct: 127 YGDTIP-GH-QADKRLIVIK-QPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPAS 183
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGT-GAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+P +AL LAEL++RAG P GV N++ G+ GAV GE S L +RK+ FTGST G ++M
Sbjct: 184 QTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPL-VRKLSFTGSTEIGRQLM 242
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
+ A+ ++KKVSLELGG +P ++FDD +LDKAV ++ F N G+ C+ A R++V +
Sbjct: 243 EQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGV 301
Query: 548 YDAFLEKVVTEVKKMNHKAHLDK------LID---------YCEKAKSEGARLLIGGKR- 591
YD F EK+ V K++ L+K LID + A +GAR++ GGK
Sbjct: 302 YDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 361
Query: 592 --------------------------------LDRPGDVDAVIKRANSTEYGLASGIFTS 619
L R D VI +AN TE+GLA+ +
Sbjct: 362 ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYAR 421
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
D+++ + ++ G V INT ++ APFGG K SG G++
Sbjct: 422 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGRE 463
|
Length = 482 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 1e-82
Identities = 133/444 (29%), Positives = 211/444 (47%), Gaps = 63/444 (14%)
Query: 269 ECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328
E NP + V +A DD++ A AA KAF L A R ++ +E+
Sbjct: 2 EVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR-PMRALPAHRRAAILLHCVARLEERF 60
Query: 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI-AHARPNSNFTFT 387
EELA L++G A + V +IDT++ A +I G +P+ AR
Sbjct: 61 EELAETIVLEAGKPIKDA-RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLV 119
Query: 388 KREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFP 447
+R PIG ITP+N+PL +++ K+AP +AAG V+KP+ +PL+AL L E+ G P
Sbjct: 120 RRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLP 179
Query: 448 KGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507
KG ++LP + + + +I+ + FTGS G + A + KKV LELGG +
Sbjct: 180 KGAFSVLPCSRDDA-DLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAA 235
Query: 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK------ 561
+++ D +LD A + + G F+ G++CIS R+ V ++YD F ++V VK
Sbjct: 236 VIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDP 295
Query: 562 ---------MNHKAHLDKLIDYCEKAKSEGARLLIGGKR--------------------- 591
M ++ +++ + +A GA+LL GGKR
Sbjct: 296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNC 355
Query: 592 ---------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642
++ D D + N +++GL +G+FT D+ KA+ D+++ G V IN
Sbjct: 356 EEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIN--- 412
Query: 643 KTDV------AAPFGGFKQSGFGK 660
DV P+GG K SG G+
Sbjct: 413 --DVPTFRVDHMPYGGVKDSGIGR 434
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 2e-82
Identities = 147/467 (31%), Positives = 220/467 (47%), Gaps = 71/467 (15%)
Query: 253 LFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
L I G+ V +E NPA+ S + +VQ A ++ + A AA AF W R
Sbjct: 35 LVIGGKEV--RTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP-TWRRTPPE 91
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R L+ + A L+ + + ELA L+ G + A V +ID +Y+A ++ G
Sbjct: 92 ERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGF 150
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
P+ N P+GV +I+PWN+PL +L+ L GNTVV+KP+E +P
Sbjct: 151 --PVEMVPGEDNRYVY--RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTP 206
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
+ A KL E+ AG P GV+N LPG G G+ + +H +R + FTGS G++I + AA
Sbjct: 207 VIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAA 266
Query: 492 -----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+ LK+V E+GGK+ +++ +D +LD+A + F +G+ C + R+ V +
Sbjct: 267 KVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHES 326
Query: 547 IYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR 591
+YD FLE++V K + K D++ Y E KSEG RLL+GG+
Sbjct: 327 VYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEV 385
Query: 592 LDRP-----------GDVD---------------AVIKR---------ANSTEYGLASGI 616
L+ DV AVIK AN TEYGL G+
Sbjct: 386 LELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGV 445
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVA----APFGGFKQSGFG 659
F+ + + G ++ N K A PFGGFK SG G
Sbjct: 446 FSRSPEHLERARREFEVGNLYAN--RKITGALVGRQPFGGFKMSGTG 490
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 266 bits (681), Expect = 2e-81
Identities = 151/455 (33%), Positives = 234/455 (51%), Gaps = 61/455 (13%)
Query: 257 GEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHL 316
GE+ + +++ +NP T+ + A+ +DVD A AA A + EW+ ++R +
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAA-QKEWAATLPQERAEI 59
Query: 317 MFKLADLMEQNKEELATIESLDSGAVYTLA-LKTHVGMSI-DTWKYFAGWCD-KILGSTI 373
+ K A ++E+ ++E+ +SG+ A ++ M+I F + +IL S +
Sbjct: 60 LEKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDV 119
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
P R REP+GV G+I+PWN+PL + +AP LA GN VV+KP+ +P+T
Sbjct: 120 PGKENR-------VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPIT 172
Query: 434 A-LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
L LA++ AG PKGV+N++ G G+ G+A +H R + FTGST G I + A
Sbjct: 173 GGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR 232
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+LKKV+LELGG +P V+ +D ++D AV ++ G F ++G+ C++ RI V ++YD F+
Sbjct: 233 -HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFV 291
Query: 553 EKVVTEVKKM----------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR-- 594
EK V VK + N +D L+D E+A EGA LL+GG+
Sbjct: 292 EKFVERVKALPYGDPSDPDTVVGPLINESQ-VDGLLDKIEQAVEEGATLLVGGEAEGNVL 350
Query: 595 -P---GDVDA------------------------VIKRANSTEYGLASGIFTSDINKAMY 626
P DV ++ AN TEYGL+ +FTSD+ + +
Sbjct: 351 EPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQ 410
Query: 627 FVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGK 660
F +ID+G IN D PFGG K SG G+
Sbjct: 411 FARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR 445
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 5e-80
Identities = 141/432 (32%), Positives = 218/432 (50%), Gaps = 61/432 (14%)
Query: 278 TICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESL 337
+ V +A++ DVD AA A A + W+ R+R ++ + ADL+E++ +E+A
Sbjct: 3 VLGEVGVADAADVDRAAARAAAA-QRAWAATPPRERAAVLRRAADLLEEHADEIADWIVR 61
Query: 338 DSGAVYTLALKTH--VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVC 395
+SG++ K VG +I AG + G +P A R + +R P+GV
Sbjct: 62 ESGSI---RPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLS----LARRVPLGVV 114
Query: 396 GLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTA-LKLAELSVRAGFPKGVINIL 454
G+I+P+N+PL++ +AP LA GN VV+KP +P++ + +A L AG P GV+++L
Sbjct: 115 GVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVL 174
Query: 455 PGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDY 514
PG GA GEA+ + + + FTGST G K+ AA +LKKVSLELGGK+ L++ DD
Sbjct: 175 PG-GADAGEALVEDPNVAMISFTGSTAVGRKV-GEAAGRHLKKVSLELGGKNALIVLDDA 232
Query: 515 NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK------MNHKAHL 568
+LD A G F ++G+ C++AGR V ++ DA+ K+ + K + L
Sbjct: 233 DLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVAL 292
Query: 569 DKLIDYCEKAKSE---------GARLLIGGKR---------LD--RPG------------ 596
LI+ + + GARL GG L +PG
Sbjct: 293 GPLINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPV 352
Query: 597 -------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN--TYNKTDVA 647
+ + AN TEYGL++GI + D+ +AM D++ +G + IN T N +
Sbjct: 353 APVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVND-EPH 411
Query: 648 APFGGFKQSGFG 659
PFGG SG G
Sbjct: 412 NPFGGMGASGNG 423
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 3e-78
Identities = 142/464 (30%), Positives = 215/464 (46%), Gaps = 82/464 (17%)
Query: 260 VNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFK 319
V+ G + E P + +V ++ + DV+ AA A +A + W+ R+R ++ +
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVE-AAFARARAAQRAWAATPVRERAAVLLR 84
Query: 320 LADLMEQNKEELATIESLDSGAVYTLALK--THVGMSIDTWKYFAGWCDKIL-----GST 372
DL+ +N+EEL + L++G A + V + T +Y+A K+L
Sbjct: 85 FHDLVLENREELLDLVQLETGKARRHAFEEVLDVAL---TARYYARRAPKLLAPRRRAGA 141
Query: 373 IPIA-HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
+P+ R+P GV G+I+PWNYPL + P L AGN VV+KP +P
Sbjct: 142 LPVLTKTTEL-------RQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTP 194
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LTAL EL AG P+ + ++ G G V G A+ + + FTGST TG + + A
Sbjct: 195 LTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG 252
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
L SLELGGK+P+++ DD +LDKA ++ F N G+ CIS RI+V +IYD F
Sbjct: 253 R-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEF 311
Query: 552 LEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP- 595
+ V V+ M +A L+ + + + A ++GA +L GGK RP
Sbjct: 312 VRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKA--RPD 369
Query: 596 -----------------------------------GDVDAVIKRANSTEYGLASGIFTSD 620
DVD ++RAN T YGL + ++T D
Sbjct: 370 LGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGD 429
Query: 621 INKAMYFVDKIDSGTVFIN-----TYNKTDVAAPFGGFKQSGFG 659
+ +I +GTV +N + D AP GG K SG G
Sbjct: 430 TARGRAIAARIRAGTVNVNEGYAAAWGSVD--APMGGMKDSGLG 471
|
Length = 524 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 6e-78
Identities = 136/471 (28%), Positives = 209/471 (44%), Gaps = 69/471 (14%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+LFINGE+V S ++ NPA I V +A +++VD A AA+ AF WS
Sbjct: 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP-AWSATPVL 60
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
R +MFK L+E+N +ELA + +L+ G A + V ++ ++ + G
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLKGE 119
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
+ + T++ R+P+GV ITP+N+P M+ W +A GNT V+KPSE P
Sbjct: 120 YLENV--ARGID-TYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVP 176
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
A++LAEL AG P GV+N++ G G A+ H I+ V F GST G I + AA
Sbjct: 177 GAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+N K+V G K+ V+ D +L++ +G F G+ C++ + D +
Sbjct: 236 -ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEW 294
Query: 552 LEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
+ K+V KK+ A +++ E EGA+L++ G+ + PG
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG 354
Query: 597 -------------------------------------DVDAVIKRANSTEYGLASGIFTS 619
+D I N+ YG + IFT
Sbjct: 355 YENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTR 414
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAP-----FGGFKQSGFGKDLDIN 665
A F ++D+G V IN + P FGG+K S FG DL
Sbjct: 415 SGAAARKFQREVDAGMVGIN----VPIPVPLAFFSFGGWKGSFFG-DLHFY 460
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 2e-77
Identities = 145/455 (31%), Positives = 218/455 (47%), Gaps = 55/455 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
INGE+ S G ++E +P + I SV ++ ++ AA A A G W + +R
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEER 63
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+ K ADL+++NKEE+A + + G ALK V +ID + ++ G ++
Sbjct: 64 IDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSL 122
Query: 374 PIAHARPNSNFT-FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
P +REP+GV I P+NYPL + K+ P L GNTVV KP+ L
Sbjct: 123 PGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL 182
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
+ LAE AGFPKGV+N++ G G G+ + H +I + FTGST G ++ K
Sbjct: 183 LGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP- 241
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+K++ LELGGK P ++ D +L+ A + + G G+ C + R+ V ++ D +
Sbjct: 242 --MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELV 299
Query: 553 EKVVTEVKKM------NHKAHLDKLI-----DYCEK----AKSEGARLLIGGKR------ 591
E + EV K+ ++ + LI D+ E A ++GA +L GG R
Sbjct: 300 ELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLI 359
Query: 592 ----LD---------------------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMY 626
LD R D++ I+ AN + YGL + IFT DINKA
Sbjct: 360 YPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARK 419
Query: 627 FVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFG 659
D ++ GTV IN+ + D PF G K SG G
Sbjct: 420 LADALEVGTVNINSKCQRGPDH-FPFLGRKDSGIG 453
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 242 bits (621), Expect = 8e-73
Identities = 129/441 (29%), Positives = 195/441 (44%), Gaps = 60/441 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
I+P + S I +A+ + V A A A +G W + +R ++ + +L+ N +E
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKG-WRAVPLEERKAIVTRAVELLAANTDE 59
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFT-FTKR 389
+A + G A GM ++ +Y ++ L F + +R
Sbjct: 60 IAEELTWQMGRPIAQAGGEIRGM-LERARYMISIAEEALADIRV----PEKDGFERYIRR 114
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP+GV +I PWNYP + + P L AGN V++K S +PL + A AG P+G
Sbjct: 115 EPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEG 174
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
V +L + + I+ +I V FTGS G I ++AA KV LELGGK P
Sbjct: 175 VFQVLHLSHETSAALIADP-RIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAY 232
Query: 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-------- 561
+ D +LD A + G FFN G++C S RI+V +IYDAF+E V VK
Sbjct: 233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLD 292
Query: 562 -------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRL--DRPG----------DVD--- 599
+ D + A ++GAR LI G D+ G +VD
Sbjct: 293 PSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSM 352
Query: 600 ---------------AV------IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
V I N +EYGL + ++T DI +A +++++GTVF+
Sbjct: 353 RVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFM 412
Query: 639 NTYNKTDVAAPFGGFKQSGFG 659
N + D A + G K SG G
Sbjct: 413 NRCDYLDPALAWTGVKDSGRG 433
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 3e-72
Identities = 128/453 (28%), Positives = 203/453 (44%), Gaps = 82/453 (18%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
P + + + DV+ AA A +A + W+ +R + + DL+ + ++E
Sbjct: 1 EAPFTGEPLGELPQSTPADVE-AAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDE 59
Query: 331 LATIESLDSGAVYTLALK--THVGMSIDTWKYFAGWCDKIL-----GSTIP-IAHARPNS 382
L + L++G A + V + +Y+A +++L IP + N
Sbjct: 60 LLDLIQLETGKARRHAFEEVLDVAI---VARYYARRAERLLKPRRRRGAIPVLTRTTVN- 115
Query: 383 NFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV 442
R P GV G+I+PWNYPL + P L AGN VV+KP + LTAL EL +
Sbjct: 116 ------RRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLI 169
Query: 443 RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLEL 502
AG P+ + ++ G G+ G AI + V FTGST TG + + A L SLEL
Sbjct: 170 EAGLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAGR-RLIGCSLEL 226
Query: 503 GGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM 562
GGK+P+++ +D +LDKA ++ F N G+ C+S RI+V ++YD F+ + V + +
Sbjct: 227 GGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRAL 286
Query: 563 NHKA---------------HLDKLIDYCEKAKSEGARLLIGGKRLDRP------------ 595
A LD++ + + A ++GA +L GG+ RP
Sbjct: 287 RLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRA--RPDLGPYFYEPTVL 344
Query: 596 ------------------------GDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKI 631
D D I+ AN T+YGL + ++T D + ++
Sbjct: 345 TGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARL 404
Query: 632 DSGTVFIN-----TYNKTDVAAPFGGFKQSGFG 659
+GTV +N + D AP GG K SG G
Sbjct: 405 RAGTVNVNEGYAAAWASID--APMGGMKDSGLG 435
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 240 bits (616), Expect = 2e-71
Identities = 142/476 (29%), Positives = 218/476 (45%), Gaps = 87/476 (18%)
Query: 248 SFPNQLFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWS 306
+P L I GE + + INPAN+S + V A + + A AA +AFE W
Sbjct: 36 DYP--LIIGGERIT--TEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE-TWK 90
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
+ S DR ++ + A ++ + K E + ++G + A +ID +Y+A
Sbjct: 91 KWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYAR--- 146
Query: 367 KILGSTIPIAHARP------NSNFTFTKREPIGVCGLITPWNYPL-MMLSWKMAPCLAAG 419
+ +A +P N F P+GV +I+PWN+P +M +A + AG
Sbjct: 147 ----QMLKLADGKPVESRPGEHNRYFY--IPLGVGVVISPWNFPFAIMAGMTLAA-IVAG 199
Query: 420 NTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGS 479
NTV++KP+ +P+ A K E+ AG P GV+N +PG+G+ G+ + H K R + FTGS
Sbjct: 200 NTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGS 259
Query: 480 TVTGMKIMKSAAESN-----LKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGEN 534
G++I + AA+ LK+V E+GGK +V+ +D +LD A + F G+
Sbjct: 260 REVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQK 319
Query: 535 CISAGRIFVDSNIYDAFLEKVVTEVKKMN--------------HKAHLDKLIDYCEKAKS 580
C + R V ++YD LEKVV K++ ++A DK++ Y E K
Sbjct: 320 CSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKE 379
Query: 581 EGARLLIGGKRLDRPG---------DVD---------------AVIKR---------ANS 607
EG RL++GG+ D G DVD A IK AN+
Sbjct: 380 EG-RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANN 438
Query: 608 TEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY-NKTDVAA-----PFGGFKQSG 657
TEYGL + +++ + G N Y N+ A PFGGF SG
Sbjct: 439 TEYGLTGAVISNNREHLEKARREFHVG----NLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 5e-70
Identities = 120/392 (30%), Positives = 190/392 (48%), Gaps = 54/392 (13%)
Query: 317 MFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIA 376
+ K+A + + E++ + + G + LA + V + D Y A W + G I
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQ-- 57
Query: 377 HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436
RP N KR +GV I PWN+P +++ KMAP L GNT+V+KPSE +P A+
Sbjct: 58 SDRPGENILLFKR-ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 116
Query: 437 LAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLK 496
A++ G PKGV N++ G G G+ ++ + K+ V TGS G KIM +AA+ N+
Sbjct: 117 FAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NIT 175
Query: 497 KVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV 556
KV LELGGK+P ++ DD +LD AV+ + N G+ C A R++V IYD F+ ++
Sbjct: 176 KVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLG 235
Query: 557 TEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---- 596
++ + + A L+++ +A EGAR+ +GGK ++ G
Sbjct: 236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYP 295
Query: 597 -----DV------------------------DAVIKRANSTEYGLASGIFTSDINKAMYF 627
DV + I AN ++YGL S I+T ++N AM
Sbjct: 296 PTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKA 355
Query: 628 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
+ + G +IN N + G+++SG G
Sbjct: 356 IKGLKFGETYINRENFEAMQGFHAGWRKSGIG 387
|
Length = 409 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 230 bits (588), Expect = 4e-68
Identities = 137/453 (30%), Positives = 221/453 (48%), Gaps = 63/453 (13%)
Query: 269 ECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328
E NP + +V + + ALA ++ S L+ R ++ K A L+E +
Sbjct: 2 EVRNPYTGEVVGTVPAGTEEALR-EALALAASYR---STLTRYQRSAILNKAAALLEARR 57
Query: 329 EELATIESLDSGAVYTLALKT---HVGMSIDTWKYFAGWCDKILGSTIP--IAHARPNSN 383
EE A + +L+SG L LK VG + D ++ A + G + + +
Sbjct: 58 EEFARLITLESG----LCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANG-KAR 112
Query: 384 FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR 443
FT REP+GV ITP+N+PL ++ K+AP +AA N +V+KPSE +PL+A+ LA+L
Sbjct: 113 KIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYE 172
Query: 444 AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELG 503
AG P +++++ G G+ + H + V FTG G I AA + K+ LELG
Sbjct: 173 AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELG 229
Query: 504 GKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-- 561
G PL++ DD +L++A +++ G + N G+ C + RI V ++ D F++ +V +
Sbjct: 230 GNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALV 289
Query: 562 ----MNHKAHLDKLID---------YCEKAKSEGARLLIGGKR---------LD------ 593
M+ + +ID E+A ++GAR+L+G +R LD
Sbjct: 290 VGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDA 349
Query: 594 ---------------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
R D+D I +NST YGL+SG+ T+D++ V+++D GTV +
Sbjct: 350 ELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNV 409
Query: 639 NTYNKTDVA-APFGGFKQSGFGKDLDINKAMYF 670
N +PFGG K SG G + +AM
Sbjct: 410 NEVPGFRSELSPFGGVKDSGLGGKEGVREAMKE 442
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 1e-67
Identities = 140/465 (30%), Positives = 199/465 (42%), Gaps = 97/465 (20%)
Query: 272 NPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331
+PA + SV +DVD A AA A EW++ S +R ++ L + +N+EE+
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQR-EWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 332 ATIESLDSGAVYTLALKTHVGMSID----TWKYFAGWCDKILGSTIPIAH--------AR 379
+ D+G KT V S+ T C+KI + H +R
Sbjct: 61 CRVACRDTG-------KTMVDASLGEILVT-------CEKI---RWTLKHGEKALRPESR 103
Query: 380 PNSNFTFTKR-----EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE-----V 429
P F KR EP+GV G I WNYP L + L AGN +V+K SE
Sbjct: 104 PGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSS 163
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
++ L+ G ++ ++ T EA++ H I + F GS G K+M +
Sbjct: 164 GFFLSIIRECLAAC-GHDPDLVQLVTCLPE-TAEALTSHPVIDHITFIGSPPVGKKVMAA 221
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
AAES L V LELGGK P ++ DD +LD+ + M G F + G+NCI R+ V IYD
Sbjct: 222 AAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYD 280
Query: 550 AFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR 594
LE + V+ M A D+L + A +GARLL GGKR
Sbjct: 281 KLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPH 340
Query: 595 PG-------------------------------------DVDAVIKRANSTEYGLASGIF 617
P D + ++ ANSTEYGL + +F
Sbjct: 341 PEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKT--DVAAPFGGFKQSGFGK 660
DI +A ++++G V IN + PFGG K SGFG+
Sbjct: 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGR 445
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 215 bits (548), Expect = 7e-62
Identities = 135/476 (28%), Positives = 218/476 (45%), Gaps = 90/476 (18%)
Query: 253 LFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
L INGE V + + INP ++S + +V A+ + + A AA KAFE W +
Sbjct: 35 LVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFE-AWKKTDPE 91
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++FK A ++ + + E + + + G + A V +ID +Y+A
Sbjct: 92 ERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEA-DAEVAEAIDFMEYYAR-------Q 143
Query: 372 TIPIAHARPNSNFTFTKRE----PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I +A +P ++ + P GV +I+PWN+P ++ + GN VV+KP+
Sbjct: 144 MIELAKGKPVNSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPA 203
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
E +P+ A K E+ AG PKGV+ +PG+G+ G+ + H K + FTGS G +I
Sbjct: 204 EAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIF 263
Query: 488 KSAA-----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIF 542
+ AA + +LK+V E+GGK +++ +D +++ A + + F G+ C + R
Sbjct: 264 ERAAKVQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAV 323
Query: 543 VDSNIYDAFLEKVV--TEVKKMN-------------HKAHLDKLIDYCEKAKSEGARLLI 587
V +YD +E+ V TE K+ + +K+++Y E K+EG RL+
Sbjct: 324 VHEKVYDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVS 382
Query: 588 GGKRLDRPG---------DVD---------------AVIKR---------ANSTEYGLAS 614
GG D G DVD A I+ AN+TEYGL
Sbjct: 383 GGCGDDSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTG 442
Query: 615 GIFTSD---INKA--------MYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
G+ +++ IN+A +YF I V PFGGFK SG
Sbjct: 443 GVISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQ---------PFGGFKMSGTD 489
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 1e-60
Identities = 142/466 (30%), Positives = 210/466 (45%), Gaps = 60/466 (12%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLSA 310
+L I+G+ V G+ +NPA E + A + D+D A AA +AF E +WSR
Sbjct: 2 RLLIDGKLVAGSAGT-FPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSR-DT 59
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
R + +L D + + EEL + + GA L + +D + A +
Sbjct: 60 ALRVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAW 119
Query: 371 STIPIAHARPN--SNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
+T + A P +RE +GV G ITPWN+P + K+ P LAAGNTVV+KP+
Sbjct: 120 TT-DLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 429 VSPLTALKLAELSVR-AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+P A L EL FP GV+NI+ + G +++ ++ V FTGST TG +M
Sbjct: 179 DTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM 238
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
AA + LKKV LELGGKS ++ DD +L A M+ V + G+ C R+ V
Sbjct: 239 ADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRAR 297
Query: 548 YDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR- 591
YD + + + D++ Y + A +EG R GG R
Sbjct: 298 YDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRP 357
Query: 592 LDRP-----------------------------------GDVDAVIKRANSTEYGLASGI 616
DR GD DAV + AN + YGL+ +
Sbjct: 358 ADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAV-RIANDSPYGLSGTV 416
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
F +D +A ++ +GTV +N APFGG+KQSG G+++
Sbjct: 417 FGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREM 462
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 4e-60
Identities = 133/441 (30%), Positives = 207/441 (46%), Gaps = 55/441 (12%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
INPA T+ + D+VD A A F ++ + R ADL+E ++
Sbjct: 6 INPATGETVKTFTALTDDEVDAAIARAHARFR-DYRTTTFAQRARWANAAADLLEAEADQ 64
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
+A + +L+ G A K ++Y+A + +L P A ++ + + +
Sbjct: 65 VAALMTLEMGKTLASA-KAEALKCAKGFRYYAEHAEALLADE-PADAAAVGASRAYVRYQ 122
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P+GV + PWN+PL + AP L AGN ++K + P TAL LA+L RAGFP G
Sbjct: 123 PLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGC 182
Query: 451 I-NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
+L G+GAV EAI + ++ TGS G + A + +KK LELGG P +
Sbjct: 183 FQTLLVGSGAV--EAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLELGGSDPFI 239
Query: 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV------------- 556
+ +LD+A ++ N G++CI+A R V +++YDAF EK V
Sbjct: 240 VMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTD 299
Query: 557 --TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
T+V + + D++ + A + GA +L GGKR D PG
Sbjct: 300 PDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLY 359
Query: 597 ---------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
D+D I+ AN+T +GL S +T D + F+D +++G VFIN
Sbjct: 360 TEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGM 419
Query: 642 NKTDVAAPFGGFKQSGFGKDL 662
+ PFGG K+SG+G++L
Sbjct: 420 TVSYPELPFGGVKRSGYGREL 440
|
Length = 457 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 4e-57
Identities = 140/476 (29%), Positives = 225/476 (47%), Gaps = 82/476 (17%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
L I GE V+ +E P N + + +V A+ DDV A A A+ L+ +
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVR-RAFAIAAAYR---PTLTRYE 59
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT---HVGMSIDTWKYFAGWCDKIL 369
R ++ + A L+ KEE++ + +L+SG L+ K VG D + A +
Sbjct: 60 RSAILDRAAALLAARKEEISDLITLESG----LSKKDSLYEVGRVADVLTFAAAEALRDD 115
Query: 370 GSTI-----PIAHARPNSNFTFTKREPI-GVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
G P AR FT+REP+ GV ITP+N+P+ ++ K+AP +A N +V
Sbjct: 116 GQIFSCDLTPHGKARK----VFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMV 171
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTG 483
+KPSE +PL+AL LA++ AG P ++ ++ G + + + + V FTG G
Sbjct: 172 VKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIG 231
Query: 484 MKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFV 543
I AA + ++ LELGG PL++ +D +LD+A +++ G + N G+ C + R+ V
Sbjct: 232 KYI---AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLV 288
Query: 544 DSNIYDAFLEKVVTEVKK------MNHKAHLDKLID-----YCE----KAKSEGARLLIG 588
++ D F E +V + + M+ + +ID E +A ++GARLL+G
Sbjct: 289 QESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLG 348
Query: 589 GKR---------LDRPG---------------------DVDAVIKRANSTEYGLASGIFT 618
R LDR D+D I+ +NST YGL+SG+ T
Sbjct: 349 NVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCT 408
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDV------AAPFGGFKQSGFGKDLDINKAM 668
+ ++ F+ ++ GTV N +V PFGG K SG G + +AM
Sbjct: 409 NRLDYITRFIAELQVGTV-----NVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAM 459
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 2e-56
Identities = 127/426 (29%), Positives = 196/426 (46%), Gaps = 72/426 (16%)
Query: 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGA------- 341
VD A AA AF W+ LS +R ++ + A+L++ NKEELA + S ++G
Sbjct: 1 QVDAAVAAARAAF-PGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT 59
Query: 342 -VYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITP 400
V +A K + +SI + G ++ P+A R + P GV + P
Sbjct: 60 EVAAMAGK--IDISIKAYHERTG--ER----ATPMAQGR-----AVLRHRPHGVMAVFGP 106
Query: 401 WNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAV 460
+N+P + + + P L AGNTVV KPSE++P A + EL AG P GV+N++ G G
Sbjct: 107 FNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRE 165
Query: 461 TGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAV 520
TGEA++ H I + FTGS TG+ + + A K ++LE+GG +PLV++D ++D A
Sbjct: 166 TGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAA 225
Query: 521 RMSMGGVFFNKGENCISAGRIFV-DSNIYDAFLEKVVTEVKKMN---------------H 564
+ + F G+ C A R+ V D + DAFLE++V K++
Sbjct: 226 YLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLII 285
Query: 565 KAHLDKLIDYCEKAKSEGARLLIGGKRLD------RPG---------------------- 596
A + + + + G L+ +RL PG
Sbjct: 286 AAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQV 345
Query: 597 ----DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN-TYNKTDVAAPFG 651
D D I AN+T +GL++G+ + D F+ +I +G V N APFG
Sbjct: 346 YRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFG 405
Query: 652 GFKQSG 657
G SG
Sbjct: 406 GVGLSG 411
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 1e-55
Identities = 134/459 (29%), Positives = 219/459 (47%), Gaps = 63/459 (13%)
Query: 256 NGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGH 315
+GE+ GG + I+PAN I V+ A +D + AA++AF+ EW + A RG
Sbjct: 4 DGEWG--GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK-EWRDVPAPKRGE 60
Query: 316 LMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI 375
++ ++ D + + KE L + SL+ G + L V ID + G ++ G TIP
Sbjct: 61 IVRQIGDALRKKKEALGKLVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIP- 118
Query: 376 AHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTAL 435
RP + + P+GV G+IT +N+P+ + W A L GN VV KPS +PLTA+
Sbjct: 119 -SERPG-HRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAI 176
Query: 436 K----LAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
+A + + G P + +++ G GA GEA+ + ++ V FTGST G ++ ++ A
Sbjct: 177 AVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+ LELGG + +++ +D +LD AVR + G+ C + R+ V +IYD
Sbjct: 236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEV 294
Query: 552 LEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
LE++ K+ ++ KA +D + E+AKS+G +L GGK +D PG
Sbjct: 295 LERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPG 354
Query: 597 --------------------------------DVDAVIKRANSTEYGLASGIFTSDINKA 624
++ I N GL+S IFT+D+ A
Sbjct: 355 NYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNA 414
Query: 625 MYFVDKI--DSGTVFINT-YNKTDVAAPFGGFKQSGFGK 660
++ D G V +N + ++ FGG K++G G+
Sbjct: 415 FRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGR 453
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 7e-53
Identities = 131/467 (28%), Positives = 215/467 (46%), Gaps = 82/467 (17%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
LFI+G++ G S NPA + + A++ V+ A AA AF W+RLS +
Sbjct: 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA-WARLSLEE 58
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGA--------VYTLALKTHVGMSIDTWKYFAGW 364
R ++ + A L+E+ KE LA + + ++G V ++ K V +SI + G
Sbjct: 59 RIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGK--VAISIKAYHERTG- 115
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
+ +P A + P GV + P+N+P + + + P L AGNTVV
Sbjct: 116 ---ESENPMPDGRA-------VLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVF 165
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KPSE++P A + +L +AG P GV+N++ G TG A++ H I + FTGS+ TG
Sbjct: 166 KPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGH 224
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
+ + A K ++LE+GG +PL++ + ++D AV + + F + G+ C A R+ V
Sbjct: 225 LLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVP 284
Query: 545 SNIY-DAFLEKVVTEVKKM-----------------NHKAHLDKLIDYCEKAKSEGARLL 586
DAFL ++V +++ + +A +L+ K + G + L
Sbjct: 285 DGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQA-AQRLLAAQAKLLALGGKSL 343
Query: 587 IGGKRLD------RPG--------------------------DVDAVIKRANSTEYGLAS 614
+ ++LD PG D D I AN+T +GL++
Sbjct: 344 LAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSA 403
Query: 615 GIFTSDINKAMYFVDKIDSGTVFINTYNK----TDVAAPFGGFKQSG 657
G+ + D F+ +I +G V +NK AAPFGG SG
Sbjct: 404 GLLSDDRELYDRFLLEIRAGIV---NWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 3e-50
Identities = 132/468 (28%), Positives = 212/468 (45%), Gaps = 84/468 (17%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
L+ING+++ G + E NP + + A + VD A AA AF W+RLS +
Sbjct: 3 LWINGDWIAGQG-EAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA-WARLSFEE 60
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGA--------VYTLALKTHVGMSIDTWKYFAGW 364
R ++ + A L+E+NKEELA + + ++G V + K + +SI + G
Sbjct: 61 RQAIVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINK--IAISIQAYHERTGE 118
Query: 365 -CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
++ + H P GV + P+N+P + + + P L AGNTVV
Sbjct: 119 KRSEMADGAAVLRH------------RPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVV 166
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTG 483
KPSE++P A +L +AG P GV+N++ G G TG+A++ H I + FTGS TG
Sbjct: 167 FKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTG 225
Query: 484 MKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFV 543
+ + A K ++LE+GG +PLVI + ++D AV + + F + G+ C A R+ V
Sbjct: 226 YLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLV 285
Query: 544 DSNIY-DAFLEKVVTEVKKM-----------------NHKAHLDKLIDYCEKAKSEGARL 585
DAFL ++V K++ + +A L+ + + G +
Sbjct: 286 PQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQA-AQGLVAAQAQLLALGGKS 344
Query: 586 LIGGKRLD--------------------------------RPGDVDAVIKRANSTEYGLA 613
L+ +L R D D I+ AN+T +GL+
Sbjct: 345 LLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLS 404
Query: 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNK----TDVAAPFGGFKQSG 657
+G+ + D F+ +I +G V +NK AAPFGG SG
Sbjct: 405 AGLLSDDREDYDQFLLEIRAGIV---NWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 7e-49
Identities = 135/464 (29%), Positives = 215/464 (46%), Gaps = 71/464 (15%)
Query: 254 FINGEFVNSVGGSSMECINPA-NESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
INGE + G I+PA +E TI V +A+++DVD AALA A WS +
Sbjct: 36 IINGEE--TETGEGAPVIDPADHERTIGEVSLADAEDVD-AALAIAAAAFAGWSATPVEE 92
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMS--IDTWKYFAGWCDKILG 370
R ++ K ADL+E N+ EL + + ++G TLA + ID +Y+A ++
Sbjct: 93 RAEILEKAADLLEANRGELIALAAAEAGK--TLA-DADAEVREAIDFCRYYAAQARELFS 149
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
+ R + VC I+PWN+PL + + ++A LAAGNTV+ KP+E +
Sbjct: 150 DPELPGPTGELNGLELHGRG-VFVC--ISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQT 206
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PL A + EL AG P+ V+ ++PG G GEA+ H +I V FTGST T I ++
Sbjct: 207 PLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRAL 266
Query: 491 AESNLKKVSL--ELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI-FVDSNI 547
AE + + L E GGK+ +++ ++AV+ + F + G+ C SA R+ ++ I
Sbjct: 267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRC-SALRLLYLQEEI 325
Query: 548 YDAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSE----------- 581
+ F+E + T+V + K L + E + E
Sbjct: 326 AERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDD 385
Query: 582 --------GARLLIGGKRLDR-------------PGDVDAVIKRANSTEYGLASGIFTSD 620
G ++G L D+D I+ N+T YGL GI + D
Sbjct: 386 GNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRD 445
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAA-----PFGGFKQSGFG 659
+ Y+ +++++G ++I N+ A PFGG+ SG G
Sbjct: 446 EREIEYWRERVEAGNLYI---NRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 7e-49
Identities = 122/465 (26%), Positives = 211/465 (45%), Gaps = 65/465 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
L I GE+V++ M ++P S + + A+ + + A AA AF W
Sbjct: 21 LVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAF-KTWKDWPQE 77
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
DR L+ K ADL+ + + EL + + G + A+ V +ID +Y+A ++
Sbjct: 78 DRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDD-VAEAIDFIRYYARAALRLRYP 136
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
+ + N +F +G +I+PWN+P+ + + + +A GNTV+ KP+E +
Sbjct: 137 AVEVVPYPGEDNESFYV--GLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAV 194
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
+ K+ E+ AGFP GV+ LPG G G +++H +IR + FTGS TG KI ++AA
Sbjct: 195 VVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAA 254
Query: 492 E-----SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+ K++ +E GGK+ +++ + + + V + F +G+ C +A R+ +
Sbjct: 255 RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQG 314
Query: 547 IYDAFLEKVVTEVKKM------NHKAHLDKLID---------YCEKAKSEGARLLIGGKR 591
Y+ LE+++ +++ + L +ID Y E K+EG +L++GGKR
Sbjct: 315 AYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKR 373
Query: 592 LDRPG-----------------------------------DVDAVIKRANSTEYGLASGI 616
L+ G D ++ ANST YGL G+
Sbjct: 374 LEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGV 433
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAA--PFGGFKQSGFG 659
++ + G ++IN + PFGGFK SG
Sbjct: 434 YSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTN 478
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 2e-48
Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 67/329 (20%)
Query: 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444
+ EP+GV +I PWNYPL + + +AAGNTVV+KPSE++P T+ LA+L +
Sbjct: 94 AYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKL-IPK 152
Query: 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504
F + ++ G V +++ + FTGS G +M++AA+ +L V+LELGG
Sbjct: 153 YFDPEAVAVVEGGVEVATALLAE--PFDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGG 209
Query: 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVK---- 560
KSP ++ D NL+ A R G F N G+ CI+ + V +I D +E++ +K
Sbjct: 210 KSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYG 269
Query: 561 ----------KMNHKAHLDKLIDYCEKAKSEGARLLIGGKR----------------LDR 594
++ ++ H D+L + K ++IGG+ D
Sbjct: 270 EDPKESPDYGRIINERHFDRLASLLDDGK-----VVIGGQVDKEERYIAPTILDDVSPDS 324
Query: 595 P----------------GDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
P D+D I+ NS LA +F+ D + + SG V +
Sbjct: 325 PLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCV 384
Query: 639 NTYNKTDV-------AAPFGGFKQSGFGK 660
N DV PFGG SG G
Sbjct: 385 N-----DVLLHAAIPNLPFGGVGNSGMGA 408
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 3e-47
Identities = 119/444 (26%), Positives = 187/444 (42%), Gaps = 64/444 (14%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
+NPA + + A +DD++ A A F +W + R + + + EE
Sbjct: 12 VNPATGEQLSVLPWAGADDIENALQLAAAGFR-DWRETNIDYRAQKLRDIGKALRARSEE 70
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARP----NSNFTF 386
+A + + + G A + V S A CD + A P N
Sbjct: 71 MAQMITREMGKPINQA-RAEVAKS-------ANLCDWYAEHGPAMLKAEPTLVENQQAVI 122
Query: 387 TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF 446
R P+G I PWN+PL + P L AGN ++K + A +A++ AG
Sbjct: 123 EYR-PLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGI 181
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
P+GV L + I+ +I V TGS G I A + LKK LELGG
Sbjct: 182 PQGVYGWLNADNDGVSQMINDS-RIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELGGSD 239
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKA 566
P ++ +D +L+ AV+ ++ G + N G+ C +A R ++ I AF E+ V +
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGD 299
Query: 567 HL---------------DKLIDYCEKAKSEGARLLIGGKRLDRPG--------------- 596
D+L E +EGARLL+GG+++ G
Sbjct: 300 PRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEM 359
Query: 597 ------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
D + ++ AN +E+GL++ IFT+D +A +++ G VFI
Sbjct: 360 TAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFI 419
Query: 639 NTYNKTDVAAPFGGFKQSGFGKDL 662
N Y +D FGG K+SGFG++L
Sbjct: 420 NGYCASDARVAFGGVKKSGFGREL 443
|
Length = 462 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 8e-47
Identities = 115/463 (24%), Positives = 195/463 (42%), Gaps = 65/463 (14%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+I G+F G+ + NPA V A+ D+VD A +A + F W + S
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLT-WGQTSLA 60
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
R ++ + L++++++E+A + + + G ++ A V ++ ++ G + G
Sbjct: 61 QRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGE 119
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
T R + ++ R+P+GVC ITP+N+P M+ W +A GNT V+KPSE P
Sbjct: 120 TSTQVATRVD---VYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVP 176
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
A+KLAEL AG P GV+N++ G + + +H ++ V F GST G I + +
Sbjct: 177 SAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
K+V G K+ +V+ D + D A +G + G+ C+ A V D +
Sbjct: 236 AHG-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCM-AISAAVLVGAADEW 293
Query: 552 LEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596
+ ++ +K+ D++ +EGA +L+ G+ G
Sbjct: 294 VPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDG 353
Query: 597 -------------------------------------DVDAVIKRANSTEYGLASGIFTS 619
++ I N++ YG + IFT
Sbjct: 354 YEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTR 413
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAP---FGGFKQSGFG 659
D A F +I+ G V +N V P F G+K S FG
Sbjct: 414 DGAAARRFQHEIEVGQVGVNV--PIPVPLPYFSFTGWKDSFFG 454
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 4e-46
Identities = 124/445 (27%), Positives = 204/445 (45%), Gaps = 62/445 (13%)
Query: 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327
+E +NP + I V + +D A A F + L A +R ++ +LADLME+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEER 60
Query: 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL----GSTIPIAHARPNSN 383
+ELA + + + G A K V +ID + L G IP+ ++
Sbjct: 61 ADELALLIAREGGKPLVDA-KVEVTRAIDGVE----LAADELGQLGGREIPMGLTPASAG 115
Query: 384 -FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV 442
FT REPIGV I+ +N+PL ++ ++AP +AAG V++KP+ +PL+ L +L
Sbjct: 116 RIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH 175
Query: 443 RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLEL 502
AG P+G +P E + ++ F GS G + A + +LE
Sbjct: 176 EAGLPEGWCQAVP-CENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGT--RCALEH 232
Query: 503 GGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV------ 556
GG +P+++ +LD + + G F++ G+ C+S R+FV + I D F +++
Sbjct: 233 GGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKL 292
Query: 557 ---------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRL-----------DRPG 596
TEV + +D++ ++ +A + GARLL GGKRL D P
Sbjct: 293 VVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPR 352
Query: 597 D--------------------VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTV 636
D +D I +ANS + +FT D++ A+ V ++D+ V
Sbjct: 353 DAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAV 412
Query: 637 FIN--TYNKTDVAAPFGGFKQSGFG 659
+N T + D PF G +QSG+G
Sbjct: 413 MVNDHTAFRVD-WMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 7e-44
Identities = 132/460 (28%), Positives = 209/460 (45%), Gaps = 65/460 (14%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
+ +GE+ S G S+ NP+ T VQ ++V+ A+ + KA + W++ R
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVN-KAMESAKAAQKAWAKTPLWKR 77
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLA-----LKTHVGMSIDTWKYFAGWCDKI 368
L+ K A +++++K +A E L V +A T V S D Y A +I
Sbjct: 78 AELLHKAAAILKEHKAPIA--ECL----VKEIAKPAKDAVTEVVRSGDLISYTAEEGVRI 131
Query: 369 LGS-TIPIAHARPN---SNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
LG ++ + P + + T + P+GV I P+NYP+ + K+AP L AGN VV+
Sbjct: 132 LGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVL 191
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KP + AL + AGFPKG+I+ + G G+ G+ ++ H + + FTG TG+
Sbjct: 192 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGD-TGI 250
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
I K A L+ +ELGGK ++ +D +LD A + G F G+ C + + V
Sbjct: 251 AISKKAGMVPLQ---MELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVM 307
Query: 545 SNIYDAFLEKVVTEVKKMN--------------HKAHLDKLIDYCEKAKSEGARLLIGGK 590
++ DA +EKV +V K+ ++ + + AK +GA K
Sbjct: 308 ESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK 367
Query: 591 R---------LD---------------------RPGDVDAVIKRANSTEYGLASGIFTSD 620
R LD R V+ I N++ +GL +FT D
Sbjct: 368 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 427
Query: 621 INKAMYFVDKIDSGTVFINTY-NKTDVAAPFGGFKQSGFG 659
INKA+ D +++GTV IN+ + PF G K SG G
Sbjct: 428 INKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIG 467
|
Length = 496 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 1e-43
Identities = 99/333 (29%), Positives = 153/333 (45%), Gaps = 78/333 (23%)
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP GVC +I+PWNYP + + +AAGNT ++KPSE++P T+ +A++ +R F +
Sbjct: 99 EPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKI-IREAFDED 157
Query: 450 VINILPGTGAVTGEAISQ---HLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
+ + G V + H + FTGS G +M +AA+ +L V+LELGGKS
Sbjct: 158 EVAVFEGDAEVAQALLELPFDH-----IFFTGSPAVGKIVMAAAAK-HLASVTLELGGKS 211
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN--- 563
P ++ + +L KA + G F N G+ CI+ +FV ++ DAF+E + E++K
Sbjct: 212 PTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKD 271
Query: 564 -------------HKAHLDKLIDYCEKAKSEGARLLIGGK-----RLDRPG--------- 596
+ H D+L + A ++GA++ GG+ R P
Sbjct: 272 AARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDM 331
Query: 597 ------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKI----DSG 634
D+D VI+ N+ LA +F+ D KA V+K+ SG
Sbjct: 332 KIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKD--KA--NVNKVLARTSSG 387
Query: 635 TVFINTYNKTDVAA-------PFGGFKQSGFGK 660
V +N DV PFGG SG G
Sbjct: 388 GVVVN-----DVVLHFLNPNLPFGGVNNSGIGS 415
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 4e-43
Identities = 98/329 (29%), Positives = 139/329 (42%), Gaps = 72/329 (21%)
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
+P+GV G+I PWNYPL + + LAAGN V++KPSE +P T+ LAEL + F +
Sbjct: 100 QPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAEL-LAEYFDED 158
Query: 450 VINILPGTGAVTGEAISQ----HLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505
+ ++ G GA A S HL FTGST G +M++AAE NL V+LELGGK
Sbjct: 159 EVAVVTG-GADVAAAFSSLPFDHLL-----FTGSTAVGRHVMRAAAE-NLTPVTLELGGK 211
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562
SP +I D +L KA G N G+ C++ + V + + F+ V KM
Sbjct: 212 SPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPT 271
Query: 563 --NHK--------AHLDKLIDYCEKAKSEGARLL-IGGKRLDRPG--------------- 596
++ H +L E A+++GAR++ + D
Sbjct: 272 LADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDD 331
Query: 597 -------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
+D I N+ LA F D + + + SG V
Sbjct: 332 MRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVT 391
Query: 638 INTYNKTDVA-------APFGGFKQSGFG 659
IN D PFGG SG G
Sbjct: 392 IN-----DTLLHVAQDDLPFGGVGASGMG 415
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 1e-40
Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 55/323 (17%)
Query: 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444
++EP+GV +I PWNYP+++ + +AAG TVV+KPSE++P TA LAEL V
Sbjct: 102 PRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPK 160
Query: 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504
++ G T + Q K+ +TGS G I ++AA+ +L V+LELGG
Sbjct: 161 YLDPDAFQVVQGGVPETTALLEQKFD--KIFYTGSGRVGRIIAEAAAK-HLTPVTLELGG 217
Query: 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLE---KVV----- 556
KSP+++ + +L+ A + + G F N G+ C++ + VD ++YD F+E KV+
Sbjct: 218 KSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYP 277
Query: 557 ------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKR------------LDRPGD- 597
+ ++ + H ++L + K + ++IGG+ D D
Sbjct: 278 GGANASPDYTRIVNPRHFNRLKSLLDTTKGK---VVIGGEMDEATRFIPPTIVSDVSWDD 334
Query: 598 -------------------VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
+D IK NS + LA IFT D ++ + + + SG V I
Sbjct: 335 SLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVI 394
Query: 639 N-TYNKTDV-AAPFGGFKQSGFG 659
N T V APFGG SG+G
Sbjct: 395 NDTLIHVGVDNAPFGGVGDSGYG 417
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 4e-39
Identities = 89/331 (26%), Positives = 144/331 (43%), Gaps = 75/331 (22%)
Query: 386 FTKREPIGVCGLITPWNYPLMMLSWKMAP---CLAAGNTVVMKPSEVSPLTALKLAELSV 442
+ EP GV +I PWNYP + +AP +AAGNT V+KPSE++P T+ +A++ +
Sbjct: 95 YIYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLKPSELTPNTSKVIAKI-I 150
Query: 443 RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLEL 502
F + + ++ G E + Q K + FTGS G +M++AA+ +L V+LEL
Sbjct: 151 EETFDEEYVAVVEGGVEENQELLDQ--KFDYIFFTGSVRVGKIVMEAAAK-HLTPVTLEL 207
Query: 503 GGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM 562
GGKSP ++ +D NL A + + G F N G+ C++ + V ++ + F++++ E+KK
Sbjct: 208 GGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKF 267
Query: 563 N--------------HKAHLDKLIDYCEKAKSEGARLLIGGKR-----------LDRPGD 597
++ H D+L + K ++ GG LD
Sbjct: 268 YGEDPLESPDYGRIINEKHFDRLAGLLDNGK-----IVFGGNTDRETLYIEPTILDNVTW 322
Query: 598 VDAV---------------------IKRANSTEYGLASGIFTSDINKAMYFVDKIDSG-- 634
D V I+ S LA +F+ D ++ + G
Sbjct: 323 DDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGG 382
Query: 635 ----TV--FINTYNKTDVAAPFGGFKQSGFG 659
T+ N Y PFGG SG G
Sbjct: 383 CINDTIMHLANPY------LPFGGVGNSGMG 407
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 146 bits (369), Expect = 6e-37
Identities = 128/479 (26%), Positives = 204/479 (42%), Gaps = 76/479 (15%)
Query: 244 KMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEG 303
+M PN I G FV S S ++ INPA + + V + +++ A AA++AF
Sbjct: 109 QMPPRVPN--LIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP- 165
Query: 304 EWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVG---MSIDTWKY 360
W R +M K +L+ +N ++LA + + G LK G ++ ++
Sbjct: 166 LWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGK----TLKDSHGDIFRGLEVVEH 221
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
G +G +P N T++ REP+GVC I P+N+P M+ W + GN
Sbjct: 222 ACGMATLQMGEYLPNV---SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 278
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
T ++KPSE P ++ LAEL++ AG P GV+NI+ GT T AI IR V F GS
Sbjct: 279 TFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTND-TVNAICDDEDIRAVSFVGSN 337
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
GM I AA K++ +G K+ ++ D N+D + + F G+ C++
Sbjct: 338 TAGMHIYARAAAKG-KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALST 396
Query: 541 -IFV-DSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGA 583
+FV D+ ++ +K+V K + K +++ + +GA
Sbjct: 397 VVFVGDAKSWE---DKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGA 453
Query: 584 RLLIGGKRLDRPG-------------------------------------DVDAVIKRAN 606
+LL+ G+ + PG D I N
Sbjct: 454 KLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIIN 513
Query: 607 STEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGF--KQSGFGKDLD 663
+YG + IFTS A F I++G + IN V PF F ++ F DL+
Sbjct: 514 KNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINV--PIPVPLPFFSFTGNKASFAGDLN 570
|
Length = 604 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 7e-37
Identities = 119/455 (26%), Positives = 196/455 (43%), Gaps = 81/455 (17%)
Query: 264 GGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLAD 322
GG INPA+ + + +V A DV+ A AA A WS +R ++ + AD
Sbjct: 125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP-IWSATPPAERAAILERAAD 183
Query: 323 LMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNS 382
LME +L + ++G + A+ V ++D +Y+AG
Sbjct: 184 LMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQA------------RDTFG 230
Query: 383 NFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV 442
N T P+ VC I+PWN+PL + + ++A LAAGN+V+ KP+E +PL A + L
Sbjct: 231 NLTHRPLGPV-VC--ISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLH 287
Query: 443 RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSL-- 500
AG P GV+ +LPG G G A++ ++ V FTGST I + A+ + + L
Sbjct: 288 EAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIA 347
Query: 501 ELGGKSPLVIFDDYNL-DKAVRMSMGGVFFNKGENCISAGRI-FVDSNIYDAFLE--KVV 556
E GG++ + I D L ++ V + F + G+ C SA R+ + ++ D L K
Sbjct: 348 ETGGQNAM-IVDSSALAEQVVADVLASAFDSAGQRC-SALRVLCLQEDVADRILTMLKGA 405
Query: 557 TEVKKMNHKAHL-------------DKLIDYCEKAKSEGARL------------------ 585
++ + L + + + +S+G +
Sbjct: 406 MAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPT 465
Query: 586 LIGGKRLD----------------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVD 629
LI + LD + ++D VI + N+T YGL G+ T + +
Sbjct: 466 LIELENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTE 525
Query: 630 KIDSGTVFINTYNKTDVAA-----PFGGFKQSGFG 659
+ +G +++ N+ V A PFGG SG G
Sbjct: 526 RAHAGNLYV---NRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 8e-37
Identities = 120/462 (25%), Positives = 201/462 (43%), Gaps = 91/462 (19%)
Query: 262 SVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKL 320
V G + +NPA+ + +V A+++DV+ A AA+ AF EWS A +R ++ +
Sbjct: 563 DVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP-EWSATPAAERAAILERA 621
Query: 321 ADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARP 380
ADLME + EL + ++G A+ V ++D +Y+A A AR
Sbjct: 622 ADLMEAHMPELFALAVREAGKTLANAI-AEVREAVDFLRYYA-------------AQAR- 666
Query: 381 NSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440
+P+G I+PWN+PL + + ++A L AGNTV+ KP+E +PL A + L
Sbjct: 667 -RLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRL 725
Query: 441 SVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSL 500
AG PK + +LPG G G A+ +I V FTGST I ++ A+ + V L
Sbjct: 726 LHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL 785
Query: 501 --ELGGKSPLVIFDDYNL-DKAVRMSMGGVFFNKGENCISAGRI-FVDSNIYDAFLE--- 553
E GG++ + I D L ++ V + F + G+ C SA R+ + ++ D L
Sbjct: 786 IAETGGQNAM-IVDSSALPEQVVADVIASAFDSAGQRC-SALRVLCLQEDVADRVLTMLK 843
Query: 554 ------------KVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP------ 595
++ T+V + + + E ++ G + +L P
Sbjct: 844 GAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLV----HQLPLPAETEKG 899
Query: 596 --------------------------------GDVDAVIKRANSTEYGLASGIFTSDINK 623
++D VI N+T YGL G+ + I++
Sbjct: 900 TFVAPTLIEIDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSR-IDE 958
Query: 624 AM-YFVDKIDSGTVFINTYNKTDVAA-----PFGGFKQSGFG 659
+ + +I +G +++ N+ + A PFGG SG G
Sbjct: 959 TIAHVTSRIRAGNIYV---NRNIIGAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 9e-37
Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 57/332 (17%)
Query: 377 HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436
P ++ EP+GV +I WNYPL + +A +AAGNTVV+KPSE+SP T+
Sbjct: 97 VFGPGK--SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKL 154
Query: 437 LAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLK 496
+A+L + + ++ G VT E + + + FTGS G +M++AAE NL
Sbjct: 155 MAKL-LTKYLDPSYVRVIEGGVEVTTELLKEPFDH--IFFTGSPRVGKLVMQAAAE-NLT 210
Query: 497 KVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV 556
+LELGGKSP+++ NL A R G F N G+ C++ + V +I D F+E +
Sbjct: 211 PCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALK 270
Query: 557 TEVKKMN--------------HKAHLDKLIDYCEKAKSEGARLLIGGK------------ 590
+K+ ++ H +L E K G +++ GG+
Sbjct: 271 EAIKEFFGEDPKKSEDYSRIVNEFHTKRLA---ELIKDHGGKVVYGGEVDIENKYVAPTI 327
Query: 591 ----RLDRP----------------GDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDK 630
LD P ++D V++ NS LA F D ++
Sbjct: 328 IVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLEN 387
Query: 631 IDSGTVFIN--TYNKTDVAAPFGGFKQSGFGK 660
SG V IN ++ + PFGG SG G
Sbjct: 388 TSSGAVVINDCVFHLLNPNLPFGGVGNSGMGA 419
|
Length = 493 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 1e-36
Identities = 119/455 (26%), Positives = 192/455 (42%), Gaps = 81/455 (17%)
Query: 265 GSSMECINPANESTIC-SVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADL 323
G + NPA+ I V AN V A +A++AF W+ A++R + +LADL
Sbjct: 50 GEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP-TWNATPAKERAAKLDRLADL 108
Query: 324 MEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSN 383
+E + EL + ++G A+ V ++D +Y+A +LG
Sbjct: 109 LELHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVLG------------E 155
Query: 384 FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR 443
F+ E GV I+PWN+PL + + +++ LAAGNTV+ KP+E + L A + EL
Sbjct: 156 FS---VESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE 212
Query: 444 AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSL--E 501
AGFP G I +LPG GA G A++ +I V FTGST I ++ A+ V L E
Sbjct: 213 AGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAE 272
Query: 502 LGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI-FVDSNIYDAFLE------- 553
GG++ +++ ++ VR + F + G+ C SA R+ V ++ D L
Sbjct: 273 TGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRC-SALRVLCVQEDVADRVLTMIQGAMQ 331
Query: 554 ---------------KVVTEVKKMNHKAHLDKLIDYCEK---AKSEGAR----------L 585
V+ K N AH++ + +K + +R
Sbjct: 332 ELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPT 391
Query: 586 LIGGKRLD----------------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVD 629
L + + ++D ++ + N T YGL G+ + +
Sbjct: 392 LFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEK 451
Query: 630 KIDSGTVFINTYNKTDVAA-----PFGGFKQSGFG 659
G ++ N+ V A PFGG SG G
Sbjct: 452 HARVGNCYV---NRNQVGAVVGVQPFGGQGLSGTG 483
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 2e-36
Identities = 118/462 (25%), Positives = 204/462 (44%), Gaps = 63/462 (13%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
++ GE+ G + +NPAN I V A+ +D + A E+A + W ++ A R
Sbjct: 24 YVGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK-IWMQVPAPKR 80
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
G ++ ++ D + + L + SL+ G + + V ID + G ++ GS I
Sbjct: 81 GEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIG-EVQEIIDMCDFAVGLSRQLNGSII 139
Query: 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433
P RPN + P+G+ G+IT +N+P +L W L GN VV K + +PL
Sbjct: 140 P--SERPN-HMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
Query: 434 ALKL----AELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
+ + AE+ + P + G GA GEAI++ +I V FTGS+ G+ +++
Sbjct: 197 TIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGL-MVQQ 254
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
+ K LEL G + +++ DD ++ AVR + G+ C + R+ + +IYD
Sbjct: 255 TVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYD 314
Query: 550 AFLEKVVTEVKKMNHKAHLDK---------------LIDYCEKAKSEGARLLIGGKRLDR 594
LE+++T K++ L+K E KS+G ++L GG ++
Sbjct: 315 DVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIES 374
Query: 595 PGD--------------------------------VDAVIKRANSTEYGLASGIFTSDIN 622
G+ ++ I+ NS GL+S IFT +
Sbjct: 375 EGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPE 434
Query: 623 KAMYFVDKI--DSGTVFINT-YNKTDVAAPFGGFKQSGFGKD 661
++ + D G V +N N ++ FGG K +G G++
Sbjct: 435 TIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
|
Length = 508 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 141 bits (359), Expect = 8e-35
Identities = 138/487 (28%), Positives = 211/487 (43%), Gaps = 101/487 (20%)
Query: 248 SFPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWS 306
+F + + G +N G + ++PA+ + V A+++ V+ A AA AF WS
Sbjct: 545 AFLEKQWQAGPIING-EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA-WS 602
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWK------- 359
R +R ++ + ADL+E N+ EL + ++G KT + +I +
Sbjct: 603 RTPVEERAAILERAADLLEANRAELIALCVREAG-------KT-LQDAIAEVREAVDFCR 654
Query: 360 YFAGWCDKILGSTIPIAHARP----NSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPC 415
Y+A ++ G+ + P SN GV I+PWN+PL + ++A
Sbjct: 655 YYAAQARRLFGAPEKL----PGPTGESNELR--LHGRGVFVCISPWNFPLAIFLGQVAAA 708
Query: 416 LAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVG 475
LAAGNTV+ KP+E +PL A + +L AG PK V+ +LPG GA G A++ +I V
Sbjct: 709 LAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVA 768
Query: 476 FTGSTVTGMKIMKSAAESNLKKVSL--ELGGKSPLVIFDDYNL-----DKAVRMSMGGVF 528
FTGST T I ++ A + V L E GG++ + I D L D V + F
Sbjct: 769 FTGSTETARIINRTLAARDGPIVPLIAETGGQNAM-IVDSTALPEQVVDDVVTSA----F 823
Query: 529 FNKGENCISAGRI-FVDSNIYDAFLE---------------KVVTEVKKMNHKAHLDKLI 572
+ G+ C SA R+ FV +I D +E + T+V + L
Sbjct: 824 RSAGQRC-SALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLD 882
Query: 573 DYCEKAKSEGARLL---------------------IGG-KRLDR-------------PGD 597
+ E+ K E ARLL I +L+R D
Sbjct: 883 AHIERMKRE-ARLLAQLPLPAGTENGHFVAPTAFEIDSISQLEREVFGPILHVIRYKASD 941
Query: 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA-----PFGG 652
+D VI N+T YGL GI + A D++ G V++ N+ + A PFGG
Sbjct: 942 LDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYV---NRNQIGAVVGVQPFGG 998
Query: 653 FKQSGFG 659
SG G
Sbjct: 999 QGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 5e-31
Identities = 96/336 (28%), Positives = 142/336 (42%), Gaps = 83/336 (24%)
Query: 386 FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG 445
+ +EP+GV +I WNYPL + + +AAGN VV+KPSEVSP TA LAEL
Sbjct: 95 YIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELI---- 150
Query: 446 FPK-------GVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKV 498
PK V+ G T E + Q + + +TGST G +M++AA+ +L V
Sbjct: 151 -PKYLDKECYPVVL---GGVEETTELLKQ--RFDYIFYTGSTSVGKIVMQAAAK-HLTPV 203
Query: 499 SLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTE 558
+LELGGKSP + ++D A R G F N G+ CI+ + + + F+E +
Sbjct: 204 TLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKT 263
Query: 559 VKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGK--RLDR------- 594
+K+ N + H +L G ++ IGG+ +R
Sbjct: 264 LKEFYGEDPKESPDYGRIINDR-HFQRLKKLL-----SGGKVAIGGQTDEKERYIAPTVL 317
Query: 595 ----PGD-------------------VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKI 631
P D +D I+ NS E LA +F+++ +
Sbjct: 318 TDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNT 377
Query: 632 DSGTVFINTYNKTDV-------AAPFGGFKQSGFGK 660
SG V +N D + PFGG SG G
Sbjct: 378 SSGGVCVN-----DTIMHYTLDSLPFGGVGNSGMGA 408
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-27
Identities = 92/322 (28%), Positives = 145/322 (45%), Gaps = 60/322 (18%)
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP+GV +I+ WN+P ++ + +AAGN VV+KPSE++P T+ LA+L +
Sbjct: 100 EPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYLDTK 158
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
I ++ G G A+ + K K+ FTGS G IM +AA+ +L V+LELGGK P++
Sbjct: 159 AIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVI 215
Query: 510 IFDDYNLDKAVRMSMGGVF-FNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562
+ +L AVR GG + N G+ CI+ + V+ + ++ + ++K
Sbjct: 216 VDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPK 275
Query: 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKR------------LDRPGD----- 597
+ H +L S +++ GG+R LD P D
Sbjct: 276 ESKDLSRIVNSHHFQRLSRLL-DDPSVADKIVHGGERDEKNLYIEPTILLDPPLDSSIMT 334
Query: 598 ---------------VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642
++ I+ NS LA+ +FT + V + SG V T+N
Sbjct: 335 EEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGV---TFN 391
Query: 643 KTDV-----AAPFGGFKQSGFG 659
T V PFGG +SGFG
Sbjct: 392 DTVVQYAIDTLPFGGVGESGFG 413
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 8e-27
Identities = 109/482 (22%), Positives = 195/482 (40%), Gaps = 97/482 (20%)
Query: 253 LFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
L I G+ V + G++ + + P + + + + A++ V+ A AA +A EW+R+
Sbjct: 35 LVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEA-RKEWARMPFE 91
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMS--------------IDT 357
DR + K ADL+ Y L T +G ID
Sbjct: 92 DRAAIFLKAADLLSGKYR-------------YELNAATMLGQGKNVWQAEIDAACELIDF 138
Query: 358 WKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLA 417
++ + +++ P++ N R G ++P+N+ + + AP L
Sbjct: 139 LRFNVKYAEELYAQQ-PLSSPAGVWNRL-EYRPLEGFVYAVSPFNFTAIGGNLAGAPALM 196
Query: 418 AGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFT 477
GN V+ KPS+ + L+ + ++ AG P GVIN +PG G V G+ + + + FT
Sbjct: 197 -GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255
Query: 478 GSTVTGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKG 532
GST T + K E+ ++ E GGK+ ++ ++D V ++ G F +G
Sbjct: 256 GSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQG 315
Query: 533 ENCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEK 577
+ C +A R +V +++ E+++ E+K++ + D++ Y +
Sbjct: 316 QKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDH 375
Query: 578 AKSE-GARLLIGGKRLDRPG-----------------------------------DVDAV 601
AKS+ A ++ GGK D G D +
Sbjct: 376 AKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEET 435
Query: 602 IKRANST-EYGLASGIFTSD---INKAMYFVDKIDSGTVFINTYNKTDVAA--PFGGFKQ 655
++ ++T Y L IF D I +A + +G +IN V PFGG +
Sbjct: 436 LELVDTTSPYALTGAIFAQDRKAIREATD-ALRNAAGNFYINDKPTGAVVGQQPFGGARA 494
Query: 656 SG 657
SG
Sbjct: 495 SG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|187731 cd08703, FDH_Hydrolase_C, The C-terminal subdomain of the hydrolase domain on the bi-functional protein 10-formyltetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 9e-26
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 32/127 (25%)
Query: 12 VIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPA 71
I ++ E +HNFIRG D PGA ++G +V +F SS+W+ G V VEG + P
Sbjct: 5 KINWDQTAEALHNFIRGNDKVPGAWATIDGEQVTLFGSSLWKGGKPPGGEVEVEGLERPG 64
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLLV-DNKM 130
I+H +GLL TGSDG+ VNVKRL D KM
Sbjct: 65 IVHKNGLLITGSDGK-------------------------------MVNVKRLQFEDGKM 93
Query: 131 IHACNFG 137
I A +G
Sbjct: 94 IPASKYG 100
|
The family represents the C-terminal subdomain of the hydrolase domain on the bi-functional protein, 10-formyltetrahydrofolate dehydrogenase (FDH). FDH catalyzes the conversion of 10-formyltetrahydrofolate, a precursor for nucleotide biosynthesis, to tetrahydrofolate. The protein comprises two functional domains: the N-terminal hydrolase domain that removes a formyl group from 10-formyltetrahydrofolate and the C-terminal NADP-dependent dehydrogenase domain that reduces the formyl group to carbon dioxide. The hydrolase domain contains an N-terminal formyl transferase catalytic core subdomain and this C-terminal subdomain, which may be involved in substrate binding. Length = 100 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 114/479 (23%), Positives = 191/479 (39%), Gaps = 90/479 (18%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEG--EWSRLSA 310
L I GE V + G + ++P N + + N+ + A E A + EWS L
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAK-ATNATEELANK-AVEAALDAKKEWSLLPF 90
Query: 311 RDRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
DR + K ADL+ + E+ L A V ID +++ A + ++
Sbjct: 91 YDRAAIFLKAADLLSGPYRAEILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARELY 150
Query: 370 GSTIPI--------AHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT 421
PI RP F + I+P+N+ + + AP L GNT
Sbjct: 151 EQQ-PISAPGEWNRTEYRPLEGFVYA----------ISPFNFTAIAGNLAGAPALM-GNT 198
Query: 422 VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTV 481
V+ KPS+ + L+ + + AG P GVIN +PG G + + + + + FTGST
Sbjct: 199 VIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTP 258
Query: 482 TGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCI 536
T + K A++ N ++ E GGK V+ +++ V ++ G F +G+ C
Sbjct: 259 TFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCS 318
Query: 537 SAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSE 581
+ R++V +++ F +++ E+ ++ + K++ Y E AKS+
Sbjct: 319 ACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSD 378
Query: 582 GARLLI--GGKRLDRPG-----------DVDAVIKRA----------------------- 605
+ L I GGK D G D + +
Sbjct: 379 PSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDL 438
Query: 606 --NSTEYGLASGIFTSDINKAMYFVDKI---DSGTVFINTYNKTDVAA--PFGGFKQSG 657
++T YGL +F D A+ DK+ +G +IN V PFGG + SG
Sbjct: 439 VDSTTSYGLTGAVFAKD-RDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-23
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 24/220 (10%)
Query: 265 GSSMECINPANESTICS-VQMANSDDVDIAALAAEKAFEGE-WSRLSARDRGHLMFKLAD 322
G INPA+ I V+ A +V+ A +A A W +R ++ + AD
Sbjct: 658 GEMSPVINPADPRDIVGYVREATPAEVEQALESAVNA--APIWFATPPAERAAILERAAD 715
Query: 323 LMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNS 382
LME + L + ++G ++ A+ V ++D +Y+AG R +
Sbjct: 716 LMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAG-------------QVRDD- 760
Query: 383 NFTFTKREPIG--VCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440
F P+G VC I+PWN+PL + + ++A LAAGN+V+ KP+E +PL A + +
Sbjct: 761 -FDNDTHRPLGPVVC--ISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI 817
Query: 441 SVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
+ AG P GV+ +LPG G G A+ ++R V FTGST
Sbjct: 818 LLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGST 857
|
Length = 1318 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 5e-21
Identities = 90/327 (27%), Positives = 142/327 (43%), Gaps = 65/327 (19%)
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP+GV + + WN+P+ + + +AAGN VV+KPSE++P T+ LA ++
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAA-NIPKYLDSK 165
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
+ ++ G G GE + QH K K+ FTGS G IM +AA +L V+LELGGK P
Sbjct: 166 AVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIM-TAAAKHLTPVALELGGKCP-C 221
Query: 510 IFD----DYNLDKAVRMSMGGVFFN-KGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN- 563
I D + AV +GG + + G+ CI+ + V+ +E + + +KK
Sbjct: 222 IVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFG 281
Query: 564 -------------HKAHLDKLIDYCEKAKSEGARLLIGGKR------------LDRPGDV 598
+K H +L + + A ++ GG L+ P D
Sbjct: 282 ENPRESKSMARILNKKHFQRLSNLLKD-PRVAASIVHGGSIDEKKLFIEPTILLNPPLDS 340
Query: 599 DAV--------------------IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFI 638
D + I NS LA FT++ + + SG+V
Sbjct: 341 DIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSV-- 398
Query: 639 NTYNKTDV-----AAPFGGFKQSGFGK 660
T+N + + PFGG +SGFG+
Sbjct: 399 -TFNDAIIQYACDSLPFGGVGESGFGR 424
|
Length = 484 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 7e-21
Identities = 96/327 (29%), Positives = 147/327 (44%), Gaps = 70/327 (21%)
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
EP+GV +I+ WNYP ++ + ++AGN VV+KPSE++P ++ LA+L +
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYLDSS 169
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
+ ++ G T + Q K K+ +TGS+ G IM +AA+ +L V LELGGKSP+V
Sbjct: 170 AVRVVEGAVTETTALLEQ--KWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVV 226
Query: 510 IFDDYNLDKAVRMSMGGVF-FNKGENCISAGRIFVDS----NIYDA-------FLEKVVT 557
+ D +L VR + G + N G+ CIS I + DA F K
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPM 286
Query: 558 EVKKM------NHKAHLDKLIDYCEKAKSEGARLLIGGKR------------LDRP---- 595
E K M H L KL+D EK S+ +++ GG++ LD P
Sbjct: 287 ESKDMSRIVNSTHFDRLSKLLD--EKEVSD--KIVYGGEKDRENLKIAPTILLDVPLDSL 342
Query: 596 -------GDVDAVIKRANSTEY---------GLASGIFTSDINKAMYFVDKIDSGTVFIN 639
G + ++ N E LA+ +FT + F + +G + +N
Sbjct: 343 IMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVN 402
Query: 640 TYNKTDVAA-------PFGGFKQSGFG 659
D+A PFGG +SG G
Sbjct: 403 -----DIAVHLALHTLPFGGVGESGMG 424
|
Length = 484 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 3e-19
Identities = 60/281 (21%), Positives = 109/281 (38%), Gaps = 33/281 (11%)
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVG 352
A LAA+ + + RL+ R + ++ + ++A L +G + A +
Sbjct: 4 ALLAADISTKA-ARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAEN--IC 60
Query: 353 MSIDTWKYFAGWCDKILGSTIPIAHA---RPNSNFTFTKRE---PIGVCGLITPWNYPLM 406
+ A + + I H P G +I +N+PL
Sbjct: 61 GDQVQLRARAF-----VIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLW 115
Query: 407 MLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAI 465
+ ++A LA GN V++KP + + L AG P + ++ G G T +A+
Sbjct: 116 IPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQAL 174
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDD-----YNLDKAV 520
H + V FTGS+ K+ A ++ ++ LEL G + V+ D Y + V
Sbjct: 175 LLHPNPKMVLFTGSSRVAEKLALDAKQA---RIYLELAGFNWKVLGPDAQAVDYVAWQCV 231
Query: 521 R-MSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVK 560
+ M+ G+ C + +FV N +V ++K
Sbjct: 232 QDMTAC-----SGQKCTAQSMLFVPENWS---KTPLVEKLK 264
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 7e-17
Identities = 77/300 (25%), Positives = 114/300 (38%), Gaps = 42/300 (14%)
Query: 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349
VD AA AA AFE + LS R + +AD +E +EL ++G A
Sbjct: 1 VDAAAAAAAAAFE-SYRALSPARRAAFLEAIADEIEALGDELVARAHAETG--LPEARLQ 57
Query: 350 -HVGMSIDTWKYFA------GWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWN 402
+G + + FA W D + P P + P+G + N
Sbjct: 58 GELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLV-PLGPVAVFGASN 116
Query: 403 YPLM--MLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA----GFPKGVINILPG 456
+PL + A LAAG VV+K P T+ +A A G P GV ++L G
Sbjct: 117 FPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQG 176
Query: 457 TGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL-KKVSLELGGKSPLVIF---- 511
G G A+ +H I+ VGFTGS G + +AA ELG +P+ I
Sbjct: 177 GGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGAL 236
Query: 512 --------DDYNLDKAVRMSMG-GVFFNKGENCISAGRIFV-DSNIYDAFLEKVVTEVKK 561
+ +++G G F C + G + V DAF+ + +
Sbjct: 237 AERGEAIAQGF----VGSLTLGAGQF------CTNPGLVLVPAGPAGDAFIAALAEALAA 286
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 71.9 bits (176), Expect = 3e-13
Identities = 73/348 (20%), Positives = 125/348 (35%), Gaps = 21/348 (6%)
Query: 320 LADLMEQNKEELATIESLDSGA-VYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHA 378
+A+ + ++ LA+ + GA + +L M K D G T + H
Sbjct: 25 IANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESK-LYKNIDTERGITASVGHI 83
Query: 379 ----RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTA 434
P++ T+ + PIGV I P PL ++ +A N + +P +P T
Sbjct: 84 QDVLLPDNGETYVRAFPIGVTMHILPSTNPLSGIT-SALRGIATRNQCIFRPHPSAPFTN 142
Query: 435 LKLAEL---SVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LA L + A PK ++ +P E + H KI + TG +K +
Sbjct: 143 RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP 202
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+ G SP+V+ + + ++A FF+ C S ++V ++ D
Sbjct: 203 HIPVIGFG---AGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPL 258
Query: 552 LEKVVTEVKKMNHKAHLDKLIDYCEKAKSEG-------ARLLIGGKRLDRPGDVDAVIKR 604
E+ ++ K + E S L + LD V+
Sbjct: 259 YEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEALESMTPLECQFRVLDVISAVENAWMI 318
Query: 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGG 652
S ++T INK FV ID+ + + N +K A G
Sbjct: 319 IESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGK 366
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 2e-10
Identities = 73/334 (21%), Positives = 129/334 (38%), Gaps = 43/334 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIA-ALAAEKAFEGEWSR-LSAR 311
++ G + G+ +P + V ++ +D+A A A + G R L+
Sbjct: 8 YVAGRWQAG-SGAGTPLFDPVTGEELVRV---SATGLDLAAAFAFAREQGGAALRALTYA 63
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID----TWKYFAGWCDK 367
R L+ + +++ N++ I + +SG + + ID T Y+A
Sbjct: 64 QRAALLAAIVKVLQANRDAYYDIATANSGTT-----RNDSAVDIDGGIFTLGYYAKL--- 115
Query: 368 ILGSTIPIAHARPNSNFTFTKREPI-----------GVCGLITPWNYPLMMLSWKMAPCL 416
G+ + A + ++P GV I +N+P L K AP L
Sbjct: 116 --GAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPAL 173
Query: 417 AAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKIRKV- 474
AG V++KP+ + ++ + V AG P G ++++ G+ A + HL+ V
Sbjct: 174 LAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSA----GLLDHLQPFDVV 229
Query: 475 GFTGSTVTGMKIMKSAA------ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVF 528
FTGS T + A N++ SL P D V+ + +
Sbjct: 230 SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMT 289
Query: 529 FNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM 562
G+ C + RIFV +YDA E + + K
Sbjct: 290 VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKT 323
|
Length = 521 |
| >gnl|CDD|217282 pfam02911, Formyl_trans_C, Formyl transferase, C-terminal domain | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-09
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I ++ EEIH IR L PGA T LNG VK+ + + ED++ +P T+ D
Sbjct: 9 IDWSQPAEEIHRLIRALSPWPGAYTFLNGKRVKILKAEVVEDSSGAASPGTIVSVD---- 64
Query: 73 LHPDGLLFTGSDG 85
GLL DG
Sbjct: 65 --KGGLLVACGDG 75
|
Length = 100 |
| >gnl|CDD|187732 cd08704, Met_tRNA_FMT_C, C-terminal domain of Formyltransferase and other enzymes | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 6e-09
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVE 65
I ++ EEIHN IR L+ PGA T LNG +K+ + + E++ +
Sbjct: 5 IDWSKSAEEIHNLIRALNPWPGAYTTLNGKRLKILKAEVLEESGEAAPGTILA 57
|
C-terminal domain of formyl transferase and other proteins with diverse enzymatic activities. Proteins found in this family include methionyl-tRNA formyltransferase, ArnA, and 10-formyltetrahydrofolate dehydrogenase. Methionyl-tRNA formyltransferases constitute the majority of the family and also demonstrate greater sequence diversity. Although most proteins with formyltransferase activity contain the C-terminal domain, some formyltransferases ( for example, prokaryotic glycinamide ribonucleotide transformylase (GART)) only have the core catalytic domain, indicating that the C-terminal domain is not a requirement for catalytic activity and may be involved in substrate binding. For example, the C-terminal domain of methionyl-tRNA formyltransferase is involved in the tRNA binding. Length = 87 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 10/198 (5%)
Query: 381 NSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP----SEVSPLTAL 435
+ N T EPIGV ITP P + +K L N+++ P +V+ A
Sbjct: 84 DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143
Query: 436 KLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL 495
L + +V AG P+ +I G ++Q L ++ G TG + AA S+
Sbjct: 144 LLLQAAVAAGAPENLI----GWIDNPSIELAQRL-MKFPGIGLLLATGGPAVVKAAYSSG 198
Query: 496 KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKV 555
K G +P+VI + ++ +AV+ + F+ G C S + V ++YD +
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLF 258
Query: 556 VTEVKKMNHKAHLDKLID 573
+ L ++
Sbjct: 259 EGQGAYKLTAEELQQVQP 276
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|215989 pfam00550, PP-binding, Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 2e-06
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 159 LKTIWAGILN--SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDF 216
L+ I A +L E+ D D F G S+ V L+ ++E + + D+ +
Sbjct: 3 LREIVAEVLGIPDEIDPDDDLFDLGLDSLLAVELLARLEEEFGVEIPPSDLFEHPTLGEL 62
|
A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Vibrio anguillarum angR has the attachment serine replaced by an alanine. Length = 66 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 4e-06
Identities = 66/306 (21%), Positives = 122/306 (39%), Gaps = 47/306 (15%)
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHV---GMSIDTWKYFAGWC-DKIL 369
G + ++A + + + +E + + +A K+ G + T K+ + D++
Sbjct: 65 GDVSHRVAHELRKPE-----VEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVR 119
Query: 370 ----GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425
+P H S+ R P G +ITP+N+PL + + ++ L GN ++K
Sbjct: 120 FLARSFNVPGDHQGQQSSGY---RWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLK 176
Query: 426 -PSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
S+VS + + L G P ++++ G + + + R FTGS+
Sbjct: 177 VDSKVS-VVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEA-NPRMTLFTGSS---- 230
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFV 543
K+ + A KV LE G ++ D ++D + G+ C + +F
Sbjct: 231 KVAERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFA 290
Query: 544 DSNIYDA-FLEKV--VTEVKKMNH--------------KAHLDKLIDYCEKAKSEGARLL 586
N A L+K+ + E +K+ H+DKL GA++L
Sbjct: 291 HENWVQAGILDKLKALAEQRKLEDLTIGPVLTWTTERILDHVDKL------LAIPGAKVL 344
Query: 587 IGGKRL 592
GGK L
Sbjct: 345 FGGKPL 350
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 5e-06
Identities = 60/255 (23%), Positives = 95/255 (37%), Gaps = 48/255 (18%)
Query: 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348
D D AA A G W AR R + ++ + E+A +G + +A +
Sbjct: 85 DPDALLAAARAAMPG-WRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQ 143
Query: 349 ---THV---GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKR---EPIGV----- 394
H G+ + + +I + + K P GV
Sbjct: 144 AGGPHAQDRGLEAVAYAWRE--MSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIG 201
Query: 395 CGLITPWN-YPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR--------AG 445
C WN YP + S LA GN V++KP P L LA ++V+ AG
Sbjct: 202 CSTFPTWNGYPGLFAS------LATGNPVIVKP---HPAAILPLA-ITVQVAREVLAEAG 251
Query: 446 FPKGVINILPGTGAVTGEAISQHL----KIRKVGFTGSTVTGMKIMKSAAESNLKKVSLE 501
F ++ + T E I+Q L ++R + FTGS G + +A + +V E
Sbjct: 252 FDPNLVTLAADT---PEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ---AQVYTE 305
Query: 502 LGGKSPLVI--FDDY 514
G + +V+ DD
Sbjct: 306 KAGVNTVVVDSTDDL 320
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 2e-05
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 25/274 (9%)
Query: 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATI--ESLDSGAVYTL 345
VD A AA+ A + ++ + + DR ++ + + + N EELA + E G V
Sbjct: 4 ATVDDAVAAAKAAQK-QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK 62
Query: 346 ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSN-FTFTKREPIGVCGLITPWNYP 404
K H+ +K G+ A N T + P GV G ITP P
Sbjct: 63 IAKNHLAA------------EKTPGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNP 110
Query: 405 LMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL----SVRAGFPKGVINILPGTGAV 460
+ LAAGN VV P + + EL AG P ++ +
Sbjct: 111 TETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIE 170
Query: 461 TGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAV 520
T + H I + TG G ++K+A S KK G P+V+ + +++KA
Sbjct: 171 TTNELMAHPDINLLVVTG----GPAVVKAALSSG-KKAIGAGAGNPPVVVDETADIEKAA 225
Query: 521 RMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEK 554
R + G F+ CI+ + ++ D +
Sbjct: 226 RDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAA 259
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 2e-05
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 27/218 (12%)
Query: 384 FTFTKREPIGVCGLITPWNYP--------LMMLSWKMAPCLAAGNTVVMKP----SEVSP 431
T + P GV G +TP P + ML AAGN+VV P +VS
Sbjct: 122 LTLIEYAPFGVIGAVTPSTNPTETIINNAISML--------AAGNSVVFSPHPGAKKVSL 173
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
L E V AG P+ ++ + T + + +H I + TG G ++K+A
Sbjct: 174 RAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTG----GPAVVKAAM 229
Query: 492 ESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
+S KK + G +P V+ D+ +++KA R + G F+ CI+ + V ++ D
Sbjct: 230 KSG-KKA-IGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADE 287
Query: 551 FLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIG 588
+ + + +KL K + +G
Sbjct: 288 LMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVG 325
|
Length = 465 |
| >gnl|CDD|234567 PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed | Back alignment and domain information |
|---|
Score = 44.7 bits (107), Expect = 9e-05
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTV 64
I ++ E+ N IRG + PGA T L+G +K+ + + +A+ G P T+
Sbjct: 211 IDWSKPAAELENHIRGFNPWPGAWTELDGQRLKILEAEL-VEASGSGAPGTI 261
|
Length = 309 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 9e-05
Identities = 63/257 (24%), Positives = 100/257 (38%), Gaps = 52/257 (20%)
Query: 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348
D D AA A G W AR R + ++ + E+A +G + +A +
Sbjct: 85 DGDALLDAAHAALPG-WRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQ 143
Query: 349 T---HV---GMSIDTWKY--------FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGV 394
H G+ + Y A W +K G P+ + FT R G+
Sbjct: 144 AGGPHAQDRGLEAVAYAYREMSRIPETAVW-EKPQGKNDPLKLKK---RFTIVPR---GI 196
Query: 395 -----CGLITPWN-YPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR----- 443
C WN YP + S LA GN V++KP P L LA L+V+
Sbjct: 197 ALVIGCSTFPTWNTYPGLFAS------LATGNPVLVKPH---PGAILPLA-LTVQVAREV 246
Query: 444 ---AGFPKGVINILPGT-GAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVS 499
AGF ++ + G + ++ +R + FTGS G + ++A ++ +V
Sbjct: 247 LGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQA---QVY 303
Query: 500 LELGGKSPLVI--FDDY 514
E G + ++I DDY
Sbjct: 304 TEKAGVNTVIIESTDDY 320
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|223301 COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTV 64
I ++ +I N IR + PGA T L G +K++ + + + G P +
Sbjct: 212 IDWSKPAAQILNKIRAFNPWPGAWTELGGKRIKIWEARV-LEGASNGKPGEI 262
|
Length = 307 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF-PKGVI 451
GV I +N+P+ L K AP AG + KP+ + A L V +G P+G +
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 452 NILPGTGAVTGEAISQHLKIRK-VGFTGSTVTGMK------IMKSAAESNLKKVSLELGG 504
++ G+ G+ + HL R V FTGS T + +++ N + SL
Sbjct: 206 QLICGS---AGDLLD-HLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAI 261
Query: 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM 562
D+ D + + + G+ C + R+ V + +A L+ + + K+
Sbjct: 262 LGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKV 319
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 41/256 (16%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIA-ALAAEKAFEGEWSR-LS 309
Q ++ G++ G + + V +S+ +D A A+A + G R L+
Sbjct: 2 QSYVAGQWHAGTGDGR-TLHDAVTGEVVARV---SSEGLDFAAAVAYAREKGGPALRALT 57
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
+R ++ LA + + KE+L + S +GA + + I T +A L
Sbjct: 58 FHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDS-WIDIDGGIGTLFAYAS-----L 110
Query: 370 GSTIPIAHARPNSNF-------------TFTKRE---PI-GVCGLITPWNYPLMMLSWKM 412
G PN++F TF + P GV I +N+P+ + K
Sbjct: 111 GRREL-----PNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKF 165
Query: 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKI 471
AP L AG V++KP+ + + + V +G P+G + ++ G+ G+ + HL
Sbjct: 166 APALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGS---VGD-LLDHLGE 221
Query: 472 RK-VGFTGSTVTGMKI 486
+ V FTGS T K+
Sbjct: 222 QDVVAFTGSAATAAKL 237
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 4e-04
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 13/176 (7%)
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL----SVRAG 445
P+GV + P P +K + A N +V P + ++ +L + AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162
Query: 446 FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505
P+G I + T E ++ +K + TG + M AA S+ G
Sbjct: 163 APEGAIGCIT---VPTIEGTNELMKNKDTSLI--LATGGEAMVKAAYSSGTPAIGVGPGN 217
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK 561
P I N+ KAVR + F+ G C S I V+ DA VV E+KK
Sbjct: 218 GPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDA----VVEELKK 269
|
Length = 488 |
| >gnl|CDD|187730 cd08702, Arna_FMT_C, C-terminal subdomain of the formyltransferase domain on ArnA, which modifies lipid A with 4-amino-4-deoxy-l-arabinose | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.003
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSS-PGASTVLNGIEVKVFASSMWEDANIEGTPVTV 64
I + + EI+N +R + PGA T + G ++K++ + +DA G P V
Sbjct: 5 IDWRMSAREIYNLVRAVTKPYPGAFTFVGGQKIKIWKARPVDDAFYNGEPGKV 57
|
Domain found in ArnA with similarity to the C-terminal domain of Formyltransferase. ArnA is a bifunctional enzyme required for the modification of lipid A with 4-amino-4-deoxy-l-arabinose (Ara4N) that leads to resistance to cationic antimicrobial peptides (CAMPs) and clinical antimicrobials such as polymyxin. The C-terminal domain of ArnA is a dehydrogenase domain that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the N-terminal domain is a formyltransferase domain that catalyzes the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). This domain family represents the C-terminal subdomain of the formyltransferase domain, downstream of the N-terminal subdomain containing the catalytic center. ArnA forms a hexameric structure (a dimer of trimers), in which the dehydrogenase domains are arranged at the center with the transformylase domains on the outside of the complex. Length = 92 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 709 | |||
| KOG2452|consensus | 881 | 100.0 | ||
| KOG2450|consensus | 501 | 100.0 | ||
| KOG2451|consensus | 503 | 100.0 | ||
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| KOG2455|consensus | 561 | 100.0 | ||
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| KOG2454|consensus | 583 | 100.0 | ||
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| KOG2456|consensus | 477 | 100.0 | ||
| KOG2453|consensus | 507 | 100.0 | ||
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.96 | |
| KOG4165|consensus | 433 | 99.9 | ||
| PF02911 | 100 | Formyl_trans_C: Formyl transferase, C-terminal dom | 99.7 | |
| COG0223 | 307 | Fmt Methionyl-tRNA formyltransferase [Translation, | 99.65 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.6 | |
| TIGR00460 | 313 | fmt methionyl-tRNA formyltransferase. The top-scor | 99.47 | |
| PRK00005 | 309 | fmt methionyl-tRNA formyltransferase; Reviewed | 99.41 | |
| PLN02285 | 334 | methionyl-tRNA formyltransferase | 99.39 | |
| PRK06988 | 312 | putative formyltransferase; Provisional | 99.37 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.21 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.89 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.61 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 98.01 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.88 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 96.87 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.45 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.36 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.32 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.29 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.16 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.12 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 95.96 | |
| KOG2449|consensus | 157 | 94.54 | ||
| TIGR00517 | 77 | acyl_carrier acyl carrier protein. S (Ser) at posi | 94.11 | |
| PRK05828 | 84 | acyl carrier protein; Validated | 93.73 | |
| KOG2450|consensus | 501 | 93.62 | ||
| CHL00124 | 82 | acpP acyl carrier protein; Validated | 93.49 | |
| PRK07081 | 83 | acyl carrier protein; Provisional | 93.48 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 93.28 | |
| PRK05087 | 78 | D-alanine--poly(phosphoribitol) ligase subunit 2; | 92.71 | |
| TIGR01688 | 73 | dltC D-alanine--poly(phosphoribitol) ligase, subun | 92.67 | |
| PRK07639 | 86 | acyl carrier protein; Provisional | 92.21 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 92.06 | |
| PRK07117 | 79 | acyl carrier protein; Validated | 92.01 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 91.47 | |
| KOG2451|consensus | 503 | 91.44 | ||
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 91.24 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 91.19 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 91.09 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 90.84 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 90.83 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 90.74 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 90.61 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 90.58 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 90.57 | |
| PRK05350 | 82 | acyl carrier protein; Provisional | 90.49 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 90.45 | |
| PRK00982 | 78 | acpP acyl carrier protein; Provisional | 90.37 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 90.35 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 90.27 | |
| PTZ00171 | 148 | acyl carrier protein; Provisional | 90.21 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 90.19 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 90.13 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 90.12 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 90.06 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 90.05 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 89.99 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 89.98 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 89.91 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 89.88 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 89.88 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 89.79 | |
| PRK07579 | 245 | hypothetical protein; Provisional | 89.74 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 89.62 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 89.57 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 89.57 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 89.55 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 89.51 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 89.5 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 89.3 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 89.2 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 89.03 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 88.98 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 88.93 | |
| KOG2452|consensus | 881 | 88.76 | ||
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 88.76 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 88.72 | |
| PRK08172 | 82 | putative acyl carrier protein IacP; Validated | 88.68 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 88.47 | |
| PRK05883 | 91 | acyl carrier protein; Validated | 88.47 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 88.41 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 88.32 | |
| PRK05691 | 4334 | peptide synthase; Validated | 88.13 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 88.09 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 88.03 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 88.02 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 87.97 | |
| PRK12449 | 80 | acyl carrier protein; Provisional | 87.92 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 87.8 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 87.7 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 87.68 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 87.66 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 87.48 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 87.37 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 87.33 | |
| PRK09184 | 89 | acyl carrier protein; Provisional | 87.31 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 87.06 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 86.79 | |
| smart00823 | 86 | PKS_PP Phosphopantetheine attachment site. Phospho | 86.74 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 86.55 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 86.39 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 86.06 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 85.87 | |
| PRK05691 | 4334 | peptide synthase; Validated | 85.86 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 85.84 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 85.57 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 85.52 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 85.38 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 85.33 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 85.3 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 85.16 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 85.05 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 85.04 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 85.01 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 84.94 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 84.77 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 84.75 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 84.56 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 84.43 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 84.2 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 84.14 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 84.09 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 84.04 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 84.03 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 83.8 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 83.68 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 83.07 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 82.97 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 82.94 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 82.74 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 82.65 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 82.65 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 82.63 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 82.21 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 81.92 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 81.76 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 81.36 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 80.93 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 80.83 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 80.78 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 80.73 |
| >KOG2452|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-135 Score=1065.09 Aligned_cols=620 Identities=55% Similarity=0.910 Sum_probs=596.4
Q ss_pred ccceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC-CCCCceeeccCCCCCceeeCCceEEEeCCC
Q psy15158 7 AISITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA-NIEGTPVTVEGSDTPAILHPDGLLFTGSDG 85 (709)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (709)
|.+..+|||++++++|||||||.|..|||||+++++++.+|+|.+|... .++|..+.+.++..||.+.+.||++.|+||
T Consensus 205 k~e~a~i~w~~~~~~~hn~irgndkvpgaw~~~~~~k~sff~s~l~~~g~~~~~da~~i~~~~~pg~v~~~gl~l~g~d~ 284 (881)
T KOG2452|consen 205 KKETAKINWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDD 284 (881)
T ss_pred cchhhcCCccchHHHHHHHhhcCCCCCcHHHHhhcceeeeeccccCCCCCCCCCCcccccccCCCceeeccceEEEcCCC
Confidence 6788999999999999999999999999999999999999999999875 789999999999999999999999999999
Q ss_pred ceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccCCCCcccccChhHhhhhHHHHHHHh
Q psy15158 86 QKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWA 164 (709)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (709)
++| .|+.+| .++||+.|++|+++..++ .|+|||+|+..++.+|.||+
T Consensus 285 ~~~-------------------------------~v~~i~~~d~k~i~as~~~~ga~~~-~l~lt~~e~~t~~~~~~iw~ 332 (881)
T KOG2452|consen 285 KML-------------------------------LVKNIQLEDGKMILASNFFKGAASS-VLELTEAELVTAEAVRSVWQ 332 (881)
T ss_pred cEE-------------------------------EEEeEEecCCcEEehhhhcccccee-EEEechhHHHHHHHHHHHHH
Confidence 999 999999 999999999999998776 59999999999999999999
Q ss_pred hhccc--CcCCCccccccCCCcchhHHHHHHHHhhcC-ceeccccccccchhhhhHHhHhhccCCCCCcchhhHHHHHHh
Q psy15158 165 GILNS--EVSEDTDFFQSGAGSMDVVRLIEEIKENLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLN 241 (709)
Q Consensus 165 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ne~v~~~~~f~~f~~~~r~~s~G~d~~~~~~~~~~~~~ 241 (709)
+||+. +++++||||+|||+|.||+|||||||..|+ ++|+||+|||.++|+||||.+.|+.||.+...+..++++.++
T Consensus 333 ~il~kv~~v~~~tdff~sga~s~dv~rlveeik~~~~g~ele~~~iy~~~t~g~~i~~~ir~lrg~~~e~~~s~d~i~~~ 412 (881)
T KOG2452|consen 333 RILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDDEEGECSIDYVEMA 412 (881)
T ss_pred HhcchheeecccchHhhcCccchhHHHHHHHHHHhCCcceeccCceEeccchhhHHHHHHHHhcCCCCcceEEeeeeeee
Confidence 99996 999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hcccccCCCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHH
Q psy15158 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKL 320 (709)
Q Consensus 242 ~~~~~~~~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~ 320 (709)
+|+++.++|+++||+|+++++++++++..+||+|+++||+++.++..|+++|+.+|+.||+ |.|+++|.++|.+.|+++
T Consensus 413 vn~~~~~~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~l 492 (881)
T KOG2452|consen 413 VNKRTVRMPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRL 492 (881)
T ss_pred eccceecCcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECC
Q psy15158 321 ADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITP 400 (709)
Q Consensus 321 AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~P 400 (709)
|++|++|++||+++.+++.|..+..|++++|.++|+.+||||+|+++++|.++|+...+|+.+.+.+.++|+|||++|+|
T Consensus 493 a~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~p 572 (881)
T KOG2452|consen 493 ADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIP 572 (881)
T ss_pred cchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCCh
Q psy15158 401 WNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480 (709)
Q Consensus 401 wNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt 480 (709)
||||++++.|++++||++- ...++++ .||+|+++|+|+-+|+.|..||+|+.|.|||||
T Consensus 573 wnyplmmlswk~aaclaa~--------------~~k~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgst 631 (881)
T KOG2452|consen 573 WNYPLMMLSWKTAACLAAQ--------------VLKFAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGST 631 (881)
T ss_pred CCchHHHHHHHHHHHHHHH--------------Hhhhhhh-------cceEEEecCCcchhccccccCCccceeccccch
Confidence 9999999999999999653 1223332 489999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHH
Q psy15158 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVK 560 (709)
Q Consensus 481 ~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~ 560 (709)
++|++|++.|+.++.|++++|+||++|+|++.|||+++|+...+.+.|++.|..|+|..|+||.++|+|+|+.+++++++
T Consensus 632 eig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~ 711 (881)
T KOG2452|consen 632 EVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVR 711 (881)
T ss_pred HHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC-----------------------------
Q psy15158 561 KM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------------------------- 596 (709)
Q Consensus 561 ~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g----------------------------- 596 (709)
++ ++.+|+.++.+|++.++++|+++.|||.+.+++|
T Consensus 712 ~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~i 791 (881)
T KOG2452|consen 712 KMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMII 791 (881)
T ss_pred hhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEE
Confidence 98 6788999999999999999999999999888766
Q ss_pred ------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHH
Q psy15158 597 ------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670 (709)
Q Consensus 597 ------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~f 670 (709)
|+|+++..+|+++|||+++|||+|.+++.+++..+++|+|+||+++..++..||||+|+||+|++.|...+-+|
T Consensus 792 s~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alney 871 (881)
T KOG2452|consen 792 SRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 871 (881)
T ss_pred EecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHhceeEEEEe
Q psy15158 671 VDKIDSGTVFIN 682 (709)
Q Consensus 671 tr~~~~ktV~iN 682 (709)
++ .|++++.
T Consensus 872 l~---~ktit~e 880 (881)
T KOG2452|consen 872 LR---VKTVTFE 880 (881)
T ss_pred ee---eEEEEee
Confidence 88 6888764
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-94 Score=776.30 Aligned_cols=427 Identities=51% Similarity=0.864 Sum_probs=407.4
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.++||||+|+++.++++++++||+||+++++|+.++.+||++|+++|++||+ +.|++++..+|..+|+++||+++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 3689999999999999999999999999999999999999999999999997 469999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|+.+.+.+.|||+.+++..++..+++.+|||++|++++.+..++.. .....|+.++|+|||+.|+|||||+.+..
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~----~~~~~yt~~eP~GV~G~I~pWN~Pllm~a 176 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTD----GEFFAYTRREPIGVCGQIIPWNFPLLMQA 176 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCC----CceEEEecCCcceeeeEeccCchHHHHHH
Confidence 99999999999999999966999999999999999999977665543 34678999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
|+++|||++||+||+||+++||+|++.+++++.+||+|+||+|+|+|.|..+|++|++||+|++|+||||+++|+.|+++
T Consensus 177 wKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 177 WKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred HhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHh-h------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-M------ 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~-l------ 562 (709)
++.+++||+++|||||+|.||++|||++.|++.++.+.|+|+||.|+|.+|+|||++|||+|+++++++.++ +
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCC
Confidence 998899999999999999999999999999999999999999999999999999999999999999999966 4
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDA 600 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dlde 600 (709)
+++.|++|+++||+.++++|+++++||.+....| +.||
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE 416 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEE 416 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHH
Confidence 7999999999999999999999999997633222 8999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+|+++|++.|||+++|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+.+..|++ .|+|+
T Consensus 417 ~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~yte---vKtv~ 493 (501)
T KOG2450|consen 417 VIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTE---VKTVT 493 (501)
T ss_pred HHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcce---eeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 79999
Q ss_pred Eecc
Q psy15158 681 INTY 684 (709)
Q Consensus 681 iN~~ 684 (709)
++..
T Consensus 494 v~~~ 497 (501)
T KOG2450|consen 494 VKLP 497 (501)
T ss_pred EeCC
Confidence 9874
|
|
| >KOG2451|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-89 Score=704.73 Aligned_cols=423 Identities=37% Similarity=0.610 Sum_probs=400.0
Q ss_pred CccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
+.+.||+|+|+++.++++|+|.||++||+|+.|+..+.++.++|+++|.+||. .|+.++..||.++|+|+.++|.+|.+
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~-s~~~~takeRs~lLrkwy~Li~en~d 101 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK-SYRNLTAKERSALLRKWYELIMENKD 101 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHhchH
Confidence 46789999999998889999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|.|||+.+|.. ||.-+..+++|||++++++.|...|.. .|+ ....+.++|+||+++|+|||||.++..
T Consensus 102 dLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA~RvyGdii~s~--~~~-rr~i~ikQPvGV~alItPWNFP~AMIt 177 (503)
T KOG2451|consen 102 DLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEARRVYGDIIPSL--NPN-RRLIVIKQPVGVVALITPWNFPAAMIT 177 (503)
T ss_pred HHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHhhhhhccccCCC--CCC-ceEEEEeccceeEEEecCcCChHHHHH
Confidence 9999999999999999985 999999999999999999999977643 233 457889999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCC---chhHHHHHHhCCCccEEEEcCChHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGT---GAVTGEAISQHLKIRKVGFTGSTVTGMKI 486 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~---g~~~g~~L~~~p~v~~V~FTGSt~~g~~I 486 (709)
++..+||++||+||+|||++||++++.++++..+||+|+|++|+++++ .+++|+.|+.+|+|++|+|||||.+|+.+
T Consensus 178 RK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL 257 (503)
T KOG2451|consen 178 RKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKIL 257 (503)
T ss_pred hHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHH
Confidence 999999999999999999999999999999999999999999999963 45899999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----
Q psy15158 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---- 562 (709)
Q Consensus 487 ~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---- 562 (709)
+++.+ ++.|++++||||+.|+||++|||+|+|++..+.++|.++||.|.+..|+|||++|||+|+..|.++++++
T Consensus 258 ~~qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGd 336 (503)
T KOG2451|consen 258 MAQSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGD 336 (503)
T ss_pred HHhhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccC
Confidence 99988 4899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC----------------------------------C
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------------------------------D 597 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g----------------------------------d 597 (709)
++..+.+|+..++++|+.+|+++++||+.....| |
T Consensus 337 G~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdt 416 (503)
T KOG2451|consen 337 GLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDT 416 (503)
T ss_pred CCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCC
Confidence 7899999999999999999999999998432211 8
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhcee
Q psy15158 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSG 677 (709)
Q Consensus 598 ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~k 677 (709)
.+|+|+.+|+++.||++++||+|.++..+++++|++|+|-+|...+.++..||||.|+||+||+++..++.+|+. .|
T Consensus 417 eeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~---ik 493 (503)
T KOG2451|consen 417 EEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLV---IK 493 (503)
T ss_pred HHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhh---hh
Confidence 999999999999999999999999999999999999999999988888899999999999999999999999998 46
Q ss_pred EEEE
Q psy15158 678 TVFI 681 (709)
Q Consensus 678 tV~i 681 (709)
.+++
T Consensus 494 ~ici 497 (503)
T KOG2451|consen 494 YICI 497 (503)
T ss_pred eeee
Confidence 6654
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-87 Score=717.66 Aligned_cols=469 Identities=26% Similarity=0.395 Sum_probs=418.9
Q ss_pred cCCCcchhHHHHHH-------HHhhcCceeccccccccch---hhhhHHhHhhccCCCCCcchhhHHHHHHhhccccc-C
Q psy15158 180 SGAGSMDVVRLIEE-------IKENLQITLQNEDVLMSSV---FRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDV-S 248 (709)
Q Consensus 180 ~~~~~~~~~~~~~~-------~~~~~~~~~~ne~v~~~~~---f~~f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~-~ 248 (709)
-||+|..|.||++| |.+... .+++-.-.+|+. =+|++...|+||.|.|++++..+..+.++++.... .
T Consensus 33 NGANsSFVn~i~D~~vpvd~li~dPv~-~v~~~~g~~h~~iplP~~l~G~~R~NSaG~Dlsne~~la~L~~al~~~a~~~ 111 (769)
T COG4230 33 NGANSSFVNRIADESVPVDELIADPVE-TVEAMAGLPHPKIPLPRDLYGAGRVNSAGLDLSNEHRLASLSSALLASAGQK 111 (769)
T ss_pred cCCchHHHHhhcCCCCCHHHHhhCHHH-HHHhcCCCCCCCCCCChHHhccccccccccCcchHHHHHHHHHHHHhhhhhh
Confidence 59999999999876 233332 122222333332 36888899999999999999999999988877544 7
Q ss_pred CCccceecCeEeeCCCCCeeeeecCCCCC-eEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 249 FPNQLFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 249 ~~~~~~I~G~~v~s~~~~~~~v~nP~tge-~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
|+..++++|+.+. +|+..+++||++.+ ++++|.+++.+|+++|++.|.+|+. .|..+|+.+|+.+|+|+||+|+.+
T Consensus 112 w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p-~W~atp~~eRAaiL~raAdlme~~ 188 (769)
T COG4230 112 WQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP-IWSATPPAERAAILERAADLMEAQ 188 (769)
T ss_pred hccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc-ccccCCHHHHHHHHHHHHHHHHHH
Confidence 8889999998764 47789999999977 9999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+.+|..++++|.||++.++.. ||++++|||||||.+++.-.++ ....|+|+|+||+||||||++
T Consensus 189 m~~L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPWNFPLAI 252 (769)
T COG4230 189 MPQLMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPWNFPLAI 252 (769)
T ss_pred HHHHHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCCCchHHH
Confidence 999999999999999999996 9999999999999998753221 346799999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
+++++++||++||+|+.||+|+||+++..-++++++||+|++++|++||+|+.+|.+|+.++++++|+|||||++++.|.
T Consensus 253 FtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~ 332 (769)
T COG4230 253 FTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQ 332 (769)
T ss_pred HHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCC--CcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---
Q psy15158 488 KSAAESNL--KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 488 ~~aa~~~~--k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--- 562 (709)
++++++++ .|+|.|+||.|+||||++|..|+++.+++.|+|.++||+|+|++.+||+++++|+.+++|+.++.++
T Consensus 333 ~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G 412 (769)
T COG4230 333 RQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVG 412 (769)
T ss_pred HHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccC
Confidence 99998654 6699999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEE--------CCccCC-----CCC---------------------
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLI--------GGKRLD-----RPG--------------------- 596 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~--------GG~~~~-----~~g--------------------- 596 (709)
++....+.+++||+.++..|-.+.. .|.+.. -++
T Consensus 413 ~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~~ 492 (769)
T COG4230 413 NPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKRD 492 (769)
T ss_pred CccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecHH
Confidence 7888899999999998888733321 122221 001
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCC--CCCCCCCCCCCCCCccChHHHH
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDV--AAPFGGFKQSGFGKDLDINKAM 668 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~--~~PFGG~k~SG~G~~~G~~~~~ 668 (709)
+++++|+.||.++||||.+|||+.++++.++.+++++||+|||++.++++ .|||||.+.||+|+++|++.+.
T Consensus 493 ~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL 566 (769)
T COG4230 493 ELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYL 566 (769)
T ss_pred HHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHH
Confidence 89999999999999999999999999999999999999999999999997 6999999999999999887543
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-85 Score=734.74 Aligned_cols=419 Identities=44% Similarity=0.752 Sum_probs=390.5
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+++|+|+|++..+ +++++||+||+++++++.++.+|+++|+++|+.||+ .|+++|+.+|.++|++++++|++|+++|
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~-~W~~~~~~eR~~iL~~~a~~l~~~~~el 78 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE-AWSRLSAEERAAILRRIADLLEARAEEL 78 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4799999998654 899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
+.++++|+|||+.++.. |+..+++.++||++.++++.+...|... ....+++++|+|||++|+|||||+++.+|+
T Consensus 79 a~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k 153 (472)
T COG1012 79 AALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDK----GSKALVRREPLGVVGAITPWNFPLALAAWK 153 (472)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCC----CcceEEEeecceEEEEECCCCCHHHHHHhh
Confidence 99999999999999986 6999999999999999988877644321 356789999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.||+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.++
T Consensus 154 ~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 154 LAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988789999999999999999999999999999998
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHh-------h--
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-------M-- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~-------l-- 562 (709)
+++||+++|||||||+||++|||++.|+..++.++|+|+||.|+|++|+|||+++||+|+++|.++ ++ .
T Consensus 234 -~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 -ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred -hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999999999999 77 3
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CC--------C-------------------CHHHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RP--------G-------------------DVDAVIKR 604 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~--------g-------------------dldeaI~~ 604 (709)
++..+++++.+||++++++|++++.||.... .| . |+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 7899999999999999999999999885221 00 0 99999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCC--CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~--~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+|+++|||+++|||+|..++.++++++++|+||||++.. ....+||||+|.||+|+++|.+++++|++ .|+++.+
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~---~k~v~~~ 468 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTE---VKTVTIK 468 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhc---ceEEEEe
Confidence 999999999999999999999999999999999999854 23468999999999999999999999988 6888876
Q ss_pred c
Q psy15158 683 T 683 (709)
Q Consensus 683 ~ 683 (709)
.
T Consensus 469 ~ 469 (472)
T COG1012 469 L 469 (472)
T ss_pred c
Confidence 5
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-85 Score=738.36 Aligned_cols=421 Identities=35% Similarity=0.620 Sum_probs=391.9
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|+++|++++++|++|+++|
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~-~W~~~~~~~R~~~L~~~a~~l~~~~~el 90 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP-AWRALTAKERANILRRWFNLMMEHQDDL 90 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 479999999765678899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++.. |+..+++.++||+.+++++.+...+.. .+ +...+++++|+|||++|+|||||+.+.+++
T Consensus 91 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (482)
T PRK11241 91 ARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGH--QA-DKRLIVIKQPIGVTAAITPWNFPAAMITRK 166 (482)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC--CC-CceEEEEEeeceEEEEECCCcChHHHHHHH
Confidence 99999999999999985 999999999999999888766544321 11 234678899999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 167 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987889999999999999999999999999999988
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------- 562 (709)
. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++++
T Consensus 247 ~-~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 325 (482)
T PRK11241 247 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKG 325 (482)
T ss_pred h-cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 5 899999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHH
Q psy15158 563 ------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIK 603 (709)
Q Consensus 563 ------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~ 603 (709)
+++.+.+++.+++++++++|+++++||...+..| |+||||+
T Consensus 326 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 326 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 5899999999999999999999999986432112 8999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
++|+++|||+++|||+|.++++++++++++|+||||++...+..+||||+|+||+|+++|.++++.|++ .|++++
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~---~k~v~~ 480 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLE---IKYMCI 480 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhc---ceEEEE
Confidence 999999999999999999999999999999999999887666678999999999999999999999998 577754
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-84 Score=735.80 Aligned_cols=422 Identities=28% Similarity=0.449 Sum_probs=389.9
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|+++|++++++|++|+++
T Consensus 114 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 114 VPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP-LWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred cceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4589999999876667899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|+.++++|+|||+.++.. |+..+++.++||++++.+..++..+.. ..+...+++++|+|||++|+|||||+.+.++
T Consensus 193 la~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~---~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~ 268 (604)
T PLN02419 193 LAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNV---SNGVDTYSIREPLGVCAGICPFNFPAMIPLW 268 (604)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccc---CCCccceEEecCccEEEEECCCccHHHHHHH
Confidence 999999999999999985 999999999999999988776544321 1223467889999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+++|+.|++.+
T Consensus 269 ~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~A 347 (604)
T PLN02419 269 MFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARA 347 (604)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999965 6889999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+. +++|+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++ +|+|+++|+++++++
T Consensus 348 a~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~ 425 (604)
T PLN02419 348 AA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEP 425 (604)
T ss_pred hc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCC
Confidence 85 89999999999999999999999999999999999999999999999999999 999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccC---C-CCC---------------------------------CH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL---D-RPG---------------------------------DV 598 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~---~-~~g---------------------------------dl 598 (709)
+++.+.+++.++|++++++|+++++||... + ..| |+
T Consensus 426 ~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~ 505 (604)
T PLN02419 426 DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSF 505 (604)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCH
Confidence 688999999999999999999999998642 1 112 89
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCC--CccChHHHHHHHHHhc
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFG--KDLDINKAMYFVDKID 675 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G--~~~G~~~~~~ftr~~~ 675 (709)
||||+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|.||+| +++|.+++..|++
T Consensus 506 dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~--- 582 (604)
T PLN02419 506 DEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQ--- 582 (604)
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhC---
Confidence 9999999999999999999999999999999999999999986433 357899999999999 7999999999988
Q ss_pred eeEEEEec
Q psy15158 676 SGTVFINT 683 (709)
Q Consensus 676 ~ktV~iN~ 683 (709)
.|+++++.
T Consensus 583 ~K~v~~~~ 590 (604)
T PLN02419 583 IKLVTQKQ 590 (604)
T ss_pred eEEEEEcc
Confidence 68888876
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-83 Score=727.86 Aligned_cols=432 Identities=69% Similarity=1.163 Sum_probs=397.5
Q ss_pred CCCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHH
Q psy15158 248 SFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQ 326 (709)
Q Consensus 248 ~~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~ 326 (709)
.++.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ +.|+.+|..+|+++|++++++|++
T Consensus 3 ~~~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 82 (486)
T cd07140 3 KMPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEE 82 (486)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHH
Confidence 3445689999999766678899999999999999999999999999999999996 259999999999999999999999
Q ss_pred cHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHH
Q psy15158 327 NKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLM 406 (709)
Q Consensus 327 ~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~ 406 (709)
|+++|++++++|+|||+.++...|+..+++.++||+.++++..+...+.....+.+...+.+++|+|||++|+|||||+.
T Consensus 83 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~ 162 (486)
T cd07140 83 HQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLM 162 (486)
T ss_pred hHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHH
Confidence 99999999999999999998756999999999999999988876654432111232346788999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHH
Q psy15158 407 MLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486 (709)
Q Consensus 407 ~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I 486 (709)
+.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|
T Consensus 163 ~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 242 (486)
T cd07140 163 MLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHI 242 (486)
T ss_pred HHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----
Q psy15158 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---- 562 (709)
Q Consensus 487 ~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---- 562 (709)
++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 243 ~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~ 322 (486)
T cd07140 243 MKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGD 322 (486)
T ss_pred HHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccC
Confidence 9998855789999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC-----------------------------------
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------------------------------- 596 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g----------------------------------- 596 (709)
+++.+++++.++|++++++|+++++||...+.+|
T Consensus 323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 402 (486)
T cd07140 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402 (486)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence 6889999999999999999999999986432222
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhce
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ 676 (709)
|++|||+++|+++|||+++|||+|.++++++++++++|+||||+++.....+||||+|+||+|+++|.+++..|++ .
T Consensus 403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~---~ 479 (486)
T cd07140 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLK---T 479 (486)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhc---E
Confidence 3999999999999999999999999999999999999999999987777788999999999999999999999999 6
Q ss_pred eEEEEe
Q psy15158 677 GTVFIN 682 (709)
Q Consensus 677 ktV~iN 682 (709)
|+++++
T Consensus 480 k~v~~~ 485 (486)
T cd07140 480 KTVTIE 485 (486)
T ss_pred EEEEEe
Confidence 888764
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-83 Score=725.58 Aligned_cols=426 Identities=44% Similarity=0.786 Sum_probs=394.6
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+.||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ +.|+.+|.++|+++|++++++|++|+++
T Consensus 22 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 101 (501)
T PLN02766 22 KLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEE 101 (501)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 479999999876678899999999999999999999999999999999996 3599999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+..+.++.++..+.. .....++.++|+|||++|+|||||+.+.++
T Consensus 102 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 177 (501)
T PLN02766 102 LAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS----RQLQGYTLKEPIGVVGHIIPWNFPSTMFFM 177 (501)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC----CCceEEEEeccceEEEEECCCCChHHHHHH
Confidence 9999999999999988755899999999999999888776543321 123467889999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|++.+
T Consensus 178 ~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~a 257 (501)
T PLN02766 178 KVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAA 257 (501)
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 258 a~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~ 337 (501)
T PLN02766 258 ATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDP 337 (501)
T ss_pred hhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 844899999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
+++++.+++.++|++++.+|+++++||...+..| |+||||
T Consensus 338 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai 417 (501)
T PLN02766 338 RARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAI 417 (501)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHH
Confidence 6889999999999999999999999986432112 899999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.++++.|++ .|+++++
T Consensus 418 ~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~---~k~v~~~ 494 (501)
T PLN02766 418 KKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQ---VKSVVTP 494 (501)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhc---eEEEEEe
Confidence 9999999999999999999999999999999999999877667788999999999999999999999999 6888886
Q ss_pred cc
Q psy15158 683 TY 684 (709)
Q Consensus 683 ~~ 684 (709)
..
T Consensus 495 ~~ 496 (501)
T PLN02766 495 LY 496 (501)
T ss_pred cc
Confidence 53
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-83 Score=726.90 Aligned_cols=427 Identities=40% Similarity=0.759 Sum_probs=395.3
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+.||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ +.|+++|..+|+++|++++++|++|+++
T Consensus 59 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 138 (538)
T PLN02466 59 QLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDE 138 (538)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876778999999999999999999999999999999999997 3599999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+.++++..+...+.. .....++.++|+|||++|+|||||+.+.++
T Consensus 139 la~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~ 214 (538)
T PLN02466 139 LAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD----GPHHVQTLHEPIGVAGQIIPWNFPLLMFAW 214 (538)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC----CCceEEEEEecceEEEEECCCchHHHHHHH
Confidence 9999999999999998756999999999999999988877655432 123457899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|.||||+++|+.|++.+
T Consensus 215 ~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~a 294 (538)
T PLN02466 215 KVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELA 294 (538)
T ss_pred HHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++
T Consensus 295 a~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~ 374 (538)
T PLN02466 295 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKK 374 (538)
T ss_pred HhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 855789999999999999999999999999999999999999999999999999999999999999877665
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
++..+++++.+++++++++|+++++||...+..| |+||||
T Consensus 375 ~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi 454 (538)
T PLN02466 375 GVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVI 454 (538)
T ss_pred CCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHH
Confidence 6888999999999999999999999986432111 999999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++|+++|||+++|||+|.+++.++++++++|+||||+....+..+||||+|.||+|+++|.++++.|++ .|+++.+
T Consensus 455 ~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~---~k~v~~~ 531 (538)
T PLN02466 455 RRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQ---VKAVVTP 531 (538)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcc---eEEEEEe
Confidence 9999999999999999999999999999999999999877777788999999999999999999999988 6888776
Q ss_pred ccC
Q psy15158 683 TYN 685 (709)
Q Consensus 683 ~~~ 685 (709)
...
T Consensus 532 ~~~ 534 (538)
T PLN02466 532 LKN 534 (538)
T ss_pred CCC
Confidence 543
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-82 Score=716.27 Aligned_cols=424 Identities=37% Similarity=0.675 Sum_probs=390.2
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhc-ccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE-WSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~-W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+||||+|+.+.++++++++||+||+++++++.++.+++++|+++|++||+ . |+++|.++|+++|++++++|++++++|
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH-hhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 58999999876667899999999999999999999999999999999997 6 999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCC--CCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHAR--PNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
++++++|+|||+.++...|+..+++.++||+.++.+..+...+..... +.+...+++++|+|||++|+|||||+.+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 999999999999998755999999999999999887766543221111 112346789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++. +++.|+.||+|++|+||||+++|+.|.+.
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 239 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQ 239 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876 99999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 240 aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (477)
T cd07113 240 AAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMD 318 (477)
T ss_pred HHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 885 899999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAV 601 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldea 601 (709)
+++.+++++.++|++++++|+++++||......| |+|||
T Consensus 319 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~dea 398 (477)
T cd07113 319 ESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEEL 398 (477)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHH
Confidence 5789999999999999999999999986432112 89999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
|+++|+++|||+++|||+|.+++.++++++++|+|+||+++..++.+||||+|+||+|+++|.+++..|++ .|++++
T Consensus 399 i~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k~v~~ 475 (477)
T cd07113 399 IQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTE---LKSVMI 475 (477)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhc---eEEEEE
Confidence 99999999999999999999999999999999999999887767788999999999999999999999998 677765
Q ss_pred e
Q psy15158 682 N 682 (709)
Q Consensus 682 N 682 (709)
.
T Consensus 476 ~ 476 (477)
T cd07113 476 R 476 (477)
T ss_pred e
Confidence 3
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-82 Score=718.18 Aligned_cols=423 Identities=38% Similarity=0.627 Sum_probs=392.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.+.||+|+|+.+.++.+++++||+||+++++++.++.+++++|+++|++||+ .|+++|..+|.++|++++++|++|+++
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~~ 103 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP-SWSKLTASERSKILRRWYDLIIANKED 103 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4589999998765678899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||..++.. |+..+++.++||+..++++.+...|... .+...+++++|+|||++|+|||||+.+.++
T Consensus 104 la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~ 179 (498)
T PLN02278 104 LAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPF---PDRRLLVLKQPVGVVGAITPWNFPLAMITR 179 (498)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCC---CCceEEEEeecccEEEEECCCccHHHHHHH
Confidence 999999999999999985 9999999999999999887765444321 123457789999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 259 (498)
T PLN02278 180 KVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA 259 (498)
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998778899999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++
T Consensus 260 a~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~ 338 (498)
T PLN02278 260 AA-TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEE 338 (498)
T ss_pred hh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 85 799999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
+++.+.+++.+++++++++|+++++||...+..| |+||||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai 418 (498)
T PLN02278 339 GVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAI 418 (498)
T ss_pred CCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHH
Confidence 5789999999999999999999999986432111 899999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++|+++|||+++|||+|.++++++++++++|+||||+.......+||||+|.||+|+++|.++++.|++ .|++++.
T Consensus 419 ~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~---~k~i~~~ 495 (498)
T PLN02278 419 AIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLE---IKYVCLG 495 (498)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhe---eEEEEEe
Confidence 9999999999999999999999999999999999999977666678999999999999999999999998 6888653
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-82 Score=714.19 Aligned_cols=420 Identities=37% Similarity=0.667 Sum_probs=387.5
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+.||||+|+.+ ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|+++|++++++|++++++|
T Consensus 3 ~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 3 KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA-EWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 47999999975 467899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++...|+..+++.++||+..++.+.+...+.. . .+...++.|+|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 157 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEY--L-EGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 157 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcc--C-CCceEEEEEecceEEEEECCCCchHHHHHHH
Confidence 999999999999988756999999999999998877665422211 1 1234678999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|+.|.||||+++|+.|++.++
T Consensus 158 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 158 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 999999999999999999999999999999885 9999999999988889999999999999999999999999999988
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------- 562 (709)
. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 237 ~-~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~ 315 (472)
T TIGR03374 237 P-SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDES 315 (472)
T ss_pred h-cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 5 899999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ------hcHHHHHHHHHHHHHHHhcC-CEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 ------NHKAHLDKLIDYCEKAKSEG-ARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 ------~~~~~~~~i~~~i~~a~~~G-a~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
++..+++++.++|++++++| +++++||...+..| |+||||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 58899999999999999999 79999986432112 899999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|+||+|+++|.+++..|++ .|++++
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTV---VRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhc---eEEEEE
Confidence 9999999999999999999999999999999999999987766789999999999999999999999988 577754
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-82 Score=713.38 Aligned_cols=422 Identities=44% Similarity=0.815 Sum_probs=390.2
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ +.|+++|.++|+++|++++++|++|+++
T Consensus 5 ~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 84 (476)
T cd07142 5 KLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADE 84 (476)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 479999999766677899999999999999999999999999999999997 2499999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+.++++..+...+.. .....+..++|+|||++|+|||||+.+.++
T Consensus 85 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 160 (476)
T cd07142 85 LAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD----GPHHVYTLHEPIGVVGQIIPWNFPLLMFAW 160 (476)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC----CCceEEEEEeceeeEEEECCCccHHHHHHH
Confidence 9999999999999988656999999999999999888776654421 113457889999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+++|+.|++.+
T Consensus 161 ~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~a 240 (476)
T cd07142 161 KVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240 (476)
T ss_pred HHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++.+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++
T Consensus 241 a~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 320 (476)
T cd07142 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRK 320 (476)
T ss_pred HHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 854789999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
++..+++++.+++++++.+|+++++||.....++ |++|||
T Consensus 321 ~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai 400 (476)
T cd07142 321 GVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVI 400 (476)
T ss_pred CCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHH
Confidence 6889999999999999999999999986432111 899999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+++|+++|||+++|||+|.+++.++++++++|+|+||+....+..+||||+|+||+|+++|.+++++|++ .|+++
T Consensus 401 ~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~---~k~v~ 475 (476)
T cd07142 401 KRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQ---VKAVV 475 (476)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhh---eeEEe
Confidence 9999999999999999999999999999999999999887777789999999999999999999999998 56664
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=713.74 Aligned_cols=420 Identities=28% Similarity=0.501 Sum_probs=385.7
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+.||||+|+.+ +.+++++||+|++++++++.++.+|+++|+++|++||+ .|+++|.++|+++|++++++|++|+++|
T Consensus 22 ~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (508)
T PLN02315 22 GCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK-IWMQVPAPKRGEIVRQIGDALRAKLDYL 98 (508)
T ss_pred CceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999854 56899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++. .|+..+++.++||++.++++.+...+.. .+ +...+..++|+|||++|+|||||+++++++
T Consensus 99 a~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~--~~-~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 174 (508)
T PLN02315 99 GRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSE--RP-NHMMMEVWNPLGIVGVITAFNFPCAVLGWN 174 (508)
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCC--CC-CceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 9999999999999997 4999999999999999888776544422 12 234567899999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHH----HHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALK----LAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~----l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
++|||++||+||+|||+.+|+++.. +.+++.++|+|+|++|+++| +.++++.|+.||++++|.||||+++|+.|+
T Consensus 175 ~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~ 253 (508)
T PLN02315 175 ACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQ 253 (508)
T ss_pred HhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999887 67888999999999999998 678999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++++
T Consensus 254 ~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p 332 (508)
T PLN02315 254 QTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDP 332 (508)
T ss_pred HHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 98884 789999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC--------------------------------CHHH
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------DVDA 600 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------dlde 600 (709)
++..+.+++.+++++++++|+++++||...+..| |+||
T Consensus 333 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~de 412 (508)
T PLN02315 333 LEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEE 412 (508)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHH
Confidence 4788999999999999999999999986422111 8999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHH--hcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhcee
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVD--KIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSG 677 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~--~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~k 677 (709)
||+++|+++|||+++|||+|.++++++++ ++++|+||||+..... +.+||||+|.||+|+++|.+++++|++ .|
T Consensus 413 ai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~---~k 489 (508)
T PLN02315 413 AIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR---RS 489 (508)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhh---EE
Confidence 99999999999999999999999999984 7999999999865544 578999999999999999999999999 68
Q ss_pred EEEEec
Q psy15158 678 TVFINT 683 (709)
Q Consensus 678 tV~iN~ 683 (709)
+++++.
T Consensus 490 ~v~~~~ 495 (508)
T PLN02315 490 TCTINY 495 (508)
T ss_pred EEEEec
Confidence 888775
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-81 Score=709.88 Aligned_cols=426 Identities=39% Similarity=0.670 Sum_probs=392.8
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhc-----hhcccCCCHHHHHHHHHHHHHHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-----EGEWSRLSARDRGHLMFKLADLME 325 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~-----~~~W~~~s~~eR~~iL~r~AdlL~ 325 (709)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| + .|+++|..+|+++|++++++|+
T Consensus 8 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~-~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 8 RQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK-DWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc-hhhcCCHHHHHHHHHHHHHHHH
Confidence 458999999987667889999999999999999999999999999999999 7 8999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccc-cccCCCCCCCceeeeecccCEEEEECCCCch
Q psy15158 326 QNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI-PIAHARPNSNFTFTKREPIGVCGLITPWNYP 404 (709)
Q Consensus 326 ~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~-p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP 404 (709)
+++++|+.++++|+|||+.++.. |+..+++.++||+.+++++.+... +.... ..+...+++++|+|||++|+|||||
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLP-METFKGYVLKEPLGVVGLITPWNYP 164 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCC-CCCceeEEEEecCceEEEECCCChH
Confidence 99999999999999999999985 999999999999999988866532 11100 1123467899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHH
Q psy15158 405 LMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484 (709)
Q Consensus 405 l~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~ 484 (709)
+.+.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+
T Consensus 165 ~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~ 244 (503)
T PLN02467 165 LLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGR 244 (503)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--
Q psy15158 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-- 562 (709)
Q Consensus 485 ~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-- 562 (709)
.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 245 ~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 323 (503)
T PLN02467 245 KIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKI 323 (503)
T ss_pred HHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 99999885 799999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC--CC-------------------------------
Q psy15158 563 -------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--PG------------------------------- 596 (709)
Q Consensus 563 -------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--~g------------------------------- 596 (709)
++..+.+++.+++++++.+|+++++||...+. .|
T Consensus 324 g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 403 (503)
T PLN02467 324 SDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKT 403 (503)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEe
Confidence 56788999999999999999999999864210 11
Q ss_pred --CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 597 --DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 597 --dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
|+||||+++|+++|||+++|||+|.+.+.++++++++|+||||+.......+||||+|.||+|+++|.+++.+|++
T Consensus 404 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~-- 481 (503)
T PLN02467 404 FSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLS-- 481 (503)
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhC--
Confidence 8999999999999999999999999999999999999999999877666678999999999999999999999998
Q ss_pred ceeEEEEec
Q psy15158 675 DSGTVFINT 683 (709)
Q Consensus 675 ~~ktV~iN~ 683 (709)
.|+++++.
T Consensus 482 -~k~i~~~~ 489 (503)
T PLN02467 482 -VKQVTKYI 489 (503)
T ss_pred -eEEEEEec
Confidence 68888764
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=710.40 Aligned_cols=423 Identities=41% Similarity=0.759 Sum_probs=392.0
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (488)
T PRK13252 7 QSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK-IWAAMTAMERSRILRRAVDILRERNDE 85 (488)
T ss_pred ccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4579999999766678899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||++.++.+.+...+.. .+...+.+++|+|||++|+|||||+.+.++
T Consensus 86 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~----~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~ 161 (488)
T PRK13252 86 LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR----GGSFVYTRREPLGVCAGIGAWNYPIQIACW 161 (488)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC----CCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence 9999999999999998756899999999999999887766543321 223467899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++. +++.|+.||+++.|+||||+++|+.|.+.+
T Consensus 162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 240 (488)
T PRK13252 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAA 240 (488)
T ss_pred HHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999766 999999999999999999999999999988
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+. +++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++
T Consensus 241 a~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 319 (488)
T PRK13252 241 AA-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDP 319 (488)
T ss_pred hh-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 85 799999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC----CC---------------------------------CH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR----PG---------------------------------DV 598 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dl 598 (709)
+++.+.+++.+++++++.+|+++++||...+. .| |+
T Consensus 320 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 399 (488)
T PRK13252 320 ATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDE 399 (488)
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCH
Confidence 67889999999999999999999999853210 01 89
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
+|||+++|+++|||+++|||+|.+++.++++++++|+||||+.......+||||+|.||+|+++|.+++.+|++ .|+
T Consensus 400 ~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~---~k~ 476 (488)
T PRK13252 400 DEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQ---IKS 476 (488)
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcc---eEE
Confidence 99999999999999999999999999999999999999999876666678999999999999999999999988 688
Q ss_pred EEEec
Q psy15158 679 VFINT 683 (709)
Q Consensus 679 V~iN~ 683 (709)
++++.
T Consensus 477 i~~~~ 481 (488)
T PRK13252 477 VQVEM 481 (488)
T ss_pred EEEeC
Confidence 88764
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-81 Score=714.14 Aligned_cols=436 Identities=26% Similarity=0.418 Sum_probs=396.2
Q ss_pred CCccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHH-H
Q psy15158 249 FPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLME-Q 326 (709)
Q Consensus 249 ~~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~-~ 326 (709)
+..++||+|+|+.+ ++.+++++||+| |+++++++.++.+|+++|+++|++||+ .|+.+|..+|+++|++++++|+ +
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~-~W~~~~~~~R~~~L~k~a~~l~~~ 107 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK-DWSALPFYDRAAIFLKAADLLSGP 107 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHhh
Confidence 44568999999975 456899999997 899999999999999999999999998 9999999999999999999999 5
Q ss_pred cHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeeccc-CEEEEECCCCchH
Q psy15158 327 NKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPI-GVCGLITPWNYPL 405 (709)
Q Consensus 327 ~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~-GVv~~I~PwNfPl 405 (709)
++++|++++++|+||++.++...++..+++.++||+.+++++.+...+.. +.+..+++.++|+ |||++|+|||||+
T Consensus 108 ~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwN~P~ 184 (533)
T TIGR01236 108 YREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSES---APGEWNRTDYRPLEGFVYAISPFNFTA 184 (533)
T ss_pred cHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCCEEEEEeCCchHH
Confidence 99999999999999999998764599999999999999888766533111 1234568889999 9999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHH
Q psy15158 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485 (709)
Q Consensus 406 ~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~ 485 (709)
.+..++++||| +||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.
T Consensus 185 ~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~ 263 (533)
T TIGR01236 185 IAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKH 263 (533)
T ss_pred HHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHH
Confidence 99999999999 89999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHHhcCCC------cEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHH
Q psy15158 486 IMKSAAESNLK------KVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEV 559 (709)
Q Consensus 486 I~~~aa~~~~k------~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~ 559 (709)
|++.+++ +++ ++++|+|||||+||++|||++.|++.+++++|.|+||+|+|++|||||+++||+|+++|++++
T Consensus 264 i~~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 342 (533)
T TIGR01236 264 LWKWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAEL 342 (533)
T ss_pred HHHHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHH
Confidence 9999986 565 499999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhh---------------hcHHHHHHHHHHHHHHHhcC--CEEEECCccCCCCC--------------------------
Q psy15158 560 KKM---------------NHKAHLDKLIDYCEKAKSEG--ARLLIGGKRLDRPG-------------------------- 596 (709)
Q Consensus 560 ~~l---------------~~~~~~~~i~~~i~~a~~~G--a~vl~GG~~~~~~g-------------------------- 596 (709)
+++ ++..+++++.+++++++++| +++++||......|
T Consensus 343 ~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPV 422 (533)
T TIGR01236 343 AEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPV 422 (533)
T ss_pred hcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCe
Confidence 886 68899999999999999987 79999986532222
Q ss_pred -------C--HHHHHHHH-hcCCCCCeEEEEccchHHHHHHHHhcC--eeeEEEcCCCCCC--CCCCCCCCCCCCCC-Cc
Q psy15158 597 -------D--VDAVIKRA-NSTEYGLASGIFTSDINKAMYFVDKID--SGTVFINTYNKTD--VAAPFGGFKQSGFG-KD 661 (709)
Q Consensus 597 -------d--ldeaI~~~-N~t~yGLta~V~T~d~~~a~~va~~l~--aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~ 661 (709)
| ++|||+++ |+++|||+++|||+|.+++.+++++++ +|+||||+..... +.+||||+|.||+| ++
T Consensus 423 l~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~ 502 (533)
T TIGR01236 423 LTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKA 502 (533)
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCccc
Confidence 4 69999999 899999999999999999999999977 9999999876554 46899999999999 89
Q ss_pred cChHHHHHHHHHhceeEEEEeccCCCCCCCCCC
Q psy15158 662 LDINKAMYFVDKIDSGTVFINTYNKTDVAAPFG 694 (709)
Q Consensus 662 ~G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~ 694 (709)
+|.+++..|++ .|+++.++.+..+++||+|
T Consensus 503 ~g~~~l~~f~~---~k~v~~~~~~~~~~~~~~~ 532 (533)
T TIGR01236 503 GGPLNLLRWTS---ARSIKETFVPLTDWSYPHM 532 (533)
T ss_pred CCHHHHHHhcc---eEEEEEEccccccccCccc
Confidence 99998999988 6999999977888889886
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-81 Score=709.37 Aligned_cols=421 Identities=40% Similarity=0.725 Sum_probs=391.5
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK-TWGKTSVAERANILNKIADRIEENLELL 80 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 468999999876678999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+||++.++...|+..+++.++||++++....+...+. +.+...+..++|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 156 (480)
T cd07559 81 AVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEI----DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWK 156 (480)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC----CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999876699999999999999988766644332 12345678899999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 157 i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 157 LAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999999996 9999999999988889999999999999999999999999999988
Q ss_pred hcCCCcEEEcCCCcccEEEcCCC-----CHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDY-----NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dA-----Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---- 562 (709)
+ +++|+++|+|||||+||++|| |++.|++.++.++|.++||.|++++|||||++++|+|+++|+++++++
T Consensus 236 ~-~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~ 314 (480)
T cd07559 236 E-NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGN 314 (480)
T ss_pred c-cCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 5 899999999999999999999 999999999999999999999999999999999999999999999887
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CCC-------------------------------
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RPG------------------------------- 596 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~g------------------------------- 596 (709)
+++.+.+++.+++++++.+|+++++||...+ ..|
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 315 PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 6889999999999999999999999986532 011
Q ss_pred --CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 597 --DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 597 --dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
|++|+|+++|+++|||+++|||+|.+++.++++++++|+|+||+....+..+||||+|+||+|+++|.+++++|++
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~-- 472 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQ-- 472 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhc--
Confidence 8999999999999999999999999999999999999999999877767789999999999999999999999998
Q ss_pred ceeEEEEe
Q psy15158 675 DSGTVFIN 682 (709)
Q Consensus 675 ~~ktV~iN 682 (709)
.|+++++
T Consensus 473 -~k~v~~~ 479 (480)
T cd07559 473 -TKNILVS 479 (480)
T ss_pred -eEEEEEe
Confidence 6888764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-81 Score=707.90 Aligned_cols=424 Identities=34% Similarity=0.635 Sum_probs=389.4
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhc-ccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE-WSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~-W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
++||||+|+. ++..++++||+||+++++++.++.+++++|+++|++||+ . |+++|.++|.++|++++++|++|+++
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK-GPWGKMTVAERADLLYAVADEIERRFDD 78 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH-hhHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4799999986 457899999999999999999999999999999999997 8 99999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||..++...|+..+++.++||+..++++.+...+.......+...+..++|+|||++|+|||||+.+.++
T Consensus 79 la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~ 158 (481)
T TIGR03216 79 FLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTW 158 (481)
T ss_pred HHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHH
Confidence 99999999999999887568999999999999998777655433221111123467889999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCch-hHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGA-VTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~-~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
+++|||++||+||+|||+.+|+++.++.+++.++|+|+|++|+++|++. ++++.|..||+|+.|+||||+++|+.|++.
T Consensus 159 ~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~ 238 (481)
T TIGR03216 159 KVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKA 238 (481)
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999665 589999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 239 aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 317 (481)
T TIGR03216 239 AAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDD 317 (481)
T ss_pred Hhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 885 789999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-----CCC---------------------------------
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----RPG--------------------------------- 596 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-----~~g--------------------------------- 596 (709)
+++.+.+++.+++++++.+|+++++||.... ..|
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~ 397 (481)
T TIGR03216 318 PATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFD 397 (481)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeC
Confidence 6788999999999999999999999986421 011
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhce
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ 676 (709)
|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+....++.+||||+|.||+|+++|.++++.|++ .
T Consensus 398 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~---~ 474 (481)
T TIGR03216 398 SEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTE---L 474 (481)
T ss_pred CHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhc---e
Confidence 8999999999999999999999999999999999999999999987777788999999999999999999999988 6
Q ss_pred eEEEEe
Q psy15158 677 GTVFIN 682 (709)
Q Consensus 677 ktV~iN 682 (709)
|+++++
T Consensus 475 k~v~~~ 480 (481)
T TIGR03216 475 TNVCIK 480 (481)
T ss_pred EEEEEe
Confidence 888765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-81 Score=705.71 Aligned_cols=421 Identities=41% Similarity=0.743 Sum_probs=390.1
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
.+||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|+++|++++++|++|+++|
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK-TWRKTTVAERANILNKIADIIDENKELL 80 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 368999999876678899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++...|+..+++.++||+.++.+..++..+.. .+...+.+++|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~ 156 (475)
T cd07117 81 AMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID----EDTLSIVLREPIGVVGQIIPWNFPFLMAAWK 156 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC----CCceeEEEEeecceEEEECCCccHHHHHHHH
Confidence 999999999999998756999999999999998877666543321 1234678999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|.+.++
T Consensus 157 i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (475)
T cd07117 157 LAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235 (475)
T ss_pred HHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999999885 9999999999988889999999999999999999999999999887
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------- 562 (709)
+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.++++
T Consensus 236 ~-~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (475)
T cd07117 236 K-KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPD 314 (475)
T ss_pred c-cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 5 899999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CCC---------------------------------CHH
Q psy15158 563 ------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RPG---------------------------------DVD 599 (709)
Q Consensus 563 ------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~g---------------------------------dld 599 (709)
+++.+.+++.+++++++.+|+++++||.... ..| |+|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 5788999999999999999999999986432 011 899
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+++..+..+||||+|+||+|+++|.++++.|++ .|++
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~---~k~v 471 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQ---MKNI 471 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhC---eEEE
Confidence 9999999999999999999999999999999999999999977767788999999999999999999999998 6787
Q ss_pred EEe
Q psy15158 680 FIN 682 (709)
Q Consensus 680 ~iN 682 (709)
+++
T Consensus 472 ~~~ 474 (475)
T cd07117 472 YID 474 (475)
T ss_pred EEe
Confidence 764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-81 Score=751.36 Aligned_cols=456 Identities=29% Similarity=0.440 Sum_probs=412.1
Q ss_pred hhHHhHhhccCCCCCcchhhHHHHHHhhccccc-CCCccceecCeEeeCCCCCeeeeecCCCCC-eEEEEeCCChhhHHH
Q psy15158 215 DFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDV-SFPNQLFINGEFVNSVGGSSMECINPANES-TICSVQMANSDDVDI 292 (709)
Q Consensus 215 ~f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~-~~~~~~~I~G~~v~s~~~~~~~v~nP~tge-~i~~v~~a~~~dv~~ 292 (709)
|.+.+.|+|++|.|+.++...+.+..++..... .|...++||| ++..++++||+|++ +|++++.++.+++++
T Consensus 516 ~~~~~~r~n~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~ 589 (1038)
T PRK11904 516 DIFGPERKNSKGLNLNDRSELEPLAAAIAAFLEKQWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQ 589 (1038)
T ss_pred hhcCCccCCCCcccCCCHHHHHHHHHHHHHHHhcCceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHH
Confidence 334457899999999999988888888766533 5666789988 34678999999988 999999999999999
Q ss_pred HHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCcc
Q psy15158 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372 (709)
Q Consensus 293 Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~ 372 (709)
|+++|++||+ .|+.+|.++|+++|++++++|++++++|+.++++|+|||+.++.. |+.+++++|+||+.++.++.+..
T Consensus 590 Ai~aA~~A~~-~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~~-EV~eaid~lr~ya~~a~~~~~~~ 667 (1038)
T PRK11904 590 ALAAARAAFP-AWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAIA-EVREAVDFCRYYAAQARRLFGAP 667 (1038)
T ss_pred HHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999998 999999999999999999999999999999999999999999985 99999999999999998887543
Q ss_pred ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEE
Q psy15158 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVIN 452 (709)
Q Consensus 373 ~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~ 452 (709)
.+.+ .+.+..+++.++|+|||++|+|||||++++++++++||++||+||+|||++||+++..+++++++||+|+|++|
T Consensus 668 ~~l~--g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~ 745 (1038)
T PRK11904 668 EKLP--GPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQ 745 (1038)
T ss_pred cccC--CCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEE
Confidence 2222 23456678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc--CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 453 ILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES--NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 453 vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~--~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~ 530 (709)
+|+|++.++++.|+.||+|++|+||||+++|+.|++.++++ +.+|+++|+|||||+||++|||+|+|++.+++|+|.+
T Consensus 746 lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~ 825 (1038)
T PRK11904 746 LLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRS 825 (1038)
T ss_pred EeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhC
Confidence 99999888999999999999999999999999999998864 3679999999999999999999999999999999999
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC-
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR- 594 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~- 594 (709)
+||+|+|++|||||++++|+|+++|+++++++ +++.+.+++.++|+.+.+ |+++++||...+.
T Consensus 826 aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~ 904 (1038)
T PRK11904 826 AGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGT 904 (1038)
T ss_pred CCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCC
Confidence 99999999999999999999999999999887 688999999999999876 7899999864321
Q ss_pred -CC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcC
Q psy15158 595 -PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINT 640 (709)
Q Consensus 595 -~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~ 640 (709)
.| +++|+|+++|+++||||++|||+|.+++.++++++++|+||||+
T Consensus 905 ~~G~fv~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~ 984 (1038)
T PRK11904 905 ENGHFVAPTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNR 984 (1038)
T ss_pred CCceEEeeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeC
Confidence 12 59999999999999999999999999999999999999999999
Q ss_pred CCCCCC--CCCCCCCCCCCCCCcc-ChHHHHHHHHHhceeEEEEecc
Q psy15158 641 YNKTDV--AAPFGGFKQSGFGKDL-DINKAMYFVDKIDSGTVFINTY 684 (709)
Q Consensus 641 ~~~~~~--~~PFGG~k~SG~G~~~-G~~~~~~ftr~~~~ktV~iN~~ 684 (709)
.+++++ .+||||+|.||+|++. |++++.+|++ .|+|++|+.
T Consensus 985 ~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~---~ktv~~~~~ 1028 (1038)
T PRK11904 985 NQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFAT---EKTVTVNTT 1028 (1038)
T ss_pred CCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhc---eEEEEEccc
Confidence 988775 4799999999999654 5666666766 799998863
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-80 Score=700.95 Aligned_cols=424 Identities=47% Similarity=0.830 Sum_probs=390.8
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhccc-CCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWS-RLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~-~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+.||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+..|+ .+|.++|+++|++++++|++|+++
T Consensus 8 ~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~ 87 (481)
T cd07143 8 GLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDY 87 (481)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4799999998766778999999999999999999999999999999999961399 999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+.++++..++..+.. .+...+..++|+|||++|+|||||+.+.++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~----~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~ 163 (481)
T cd07143 88 LASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD----IKKLTYTRHEPIGVCGQIIPWNFPLLMCAW 163 (481)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC----CCceEEEEEecceeEEEECCCcChHHHHHH
Confidence 9999999999999765545899999999999999987766543321 223467899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|++.+
T Consensus 164 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~a 243 (481)
T cd07143 164 KIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAA 243 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|++.++++
T Consensus 244 a~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 323 (481)
T cd07143 244 AKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAE 323 (481)
T ss_pred HHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 854789999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
+++.+.+++.+++++++.+|+++++||......| |++|||
T Consensus 324 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 403 (481)
T cd07143 324 DTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAI 403 (481)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHH
Confidence 5788999999999999999999999986432111 899999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++|+++|||+++|||+|.+++.++++++++|+|+||+....+..+||||+|.||+|+++|.+++..|++ .|+++++
T Consensus 404 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~---~k~i~~~ 480 (481)
T cd07143 404 KRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQ---IKAVHIN 480 (481)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhC---eEEEEEe
Confidence 9999999999999999999999999999999999999987777788999999999999999999999998 6788764
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-80 Score=701.94 Aligned_cols=420 Identities=38% Similarity=0.645 Sum_probs=386.8
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE-AWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 479999999876678899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
+.++++|+|||+.++...|+..+++.++||+..+.+..+...+. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 156 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI----DENTVAYHFHEPLGVVGQIIPWNFPLLMATWK 156 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC----CCCceEEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999875699999999999999887765543322 12234678999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+++..|+.||+|+.|+||||+++|+.|.+.++
T Consensus 157 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 157 LAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 9999999999977889999999999999999999999999999998
Q ss_pred hcCCCcEEEcCCCcccEEEcCC------CCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDD------YNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~d------ADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--- 562 (709)
+ +++|+++|+|||||+||++| ||++.|++.++.++ +|+||.|++++|||||++++|+|+++|+++++++
T Consensus 236 ~-~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 236 E-NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQG 313 (479)
T ss_pred c-CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 5 79999999999999999987 79999999999865 5899999999999999999999999999999886
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CCC------------------------------
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RPG------------------------------ 596 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~g------------------------------ 596 (709)
+++.+.+++.+++++++.+|+++++||.... ..|
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 6789999999999999999999999985421 011
Q ss_pred --CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 597 --DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 597 --dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+....+..+||||+|.||+|+++|.+++++|++
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~-- 471 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQ-- 471 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhc--
Confidence 9999999999999999999999999999999999999999999877776778999999999999999999999999
Q ss_pred ceeEEEEe
Q psy15158 675 DSGTVFIN 682 (709)
Q Consensus 675 ~~ktV~iN 682 (709)
.|+++++
T Consensus 472 -~k~~~~~ 478 (479)
T cd07116 472 -TKNLLVS 478 (479)
T ss_pred -eEEEEEe
Confidence 6787664
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-80 Score=699.93 Aligned_cols=422 Identities=39% Similarity=0.692 Sum_probs=390.0
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.+.||||+|+.+ ++++++++||+||++|++++.++.+++++|+++|++||+ .|+++|.++|.++|++++++|++++++
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 80 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP-EWSQTTPKERAEALLKLADAIEENADE 80 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 347999999875 567899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+..++++.+...+.. ..+...+++|+|+|||++|+|||||+.+.++
T Consensus 81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~---~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~ 157 (475)
T PRK13473 81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEY---LEGHTSMIRRDPVGVVASIAPWNYPLMMAAW 157 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCceeEEEEecceeEEEEccCChHHHHHHH
Confidence 9999999999999988655899999999999998887766432211 1123457889999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.+
T Consensus 158 ~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~a 236 (475)
T PRK13473 158 KLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAA 236 (475)
T ss_pred HHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 237 a~-~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 315 (475)
T PRK13473 237 AD-SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDE 315 (475)
T ss_pred hh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 85 799999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcC-CEEEECCccCCCCC---------------------------------CHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEG-ARLLIGGKRLDRPG---------------------------------DVDAV 601 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~G-a~vl~GG~~~~~~g---------------------------------dldea 601 (709)
+++.+.+++.++++++.++| +++++||...+..| |+|||
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 68899999999999999999 99999986532111 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
|+++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++ .|++++
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~---~k~i~~ 472 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTV---VRHVMV 472 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhc---eEEEEE
Confidence 99999999999999999999999999999999999999987766678999999999999999999999998 678766
Q ss_pred e
Q psy15158 682 N 682 (709)
Q Consensus 682 N 682 (709)
+
T Consensus 473 ~ 473 (475)
T PRK13473 473 K 473 (475)
T ss_pred e
Confidence 4
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-80 Score=700.11 Aligned_cols=423 Identities=47% Similarity=0.828 Sum_probs=391.0
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-h-cccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-G-EWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~-~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
+.||||+|+.+.++.+++++||+||+++++++.++.+++++|+++|++||+ + .|+++|.++|.++|++++++|+++.+
T Consensus 8 ~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 87 (481)
T cd07141 8 KIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRA 87 (481)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 479999999876678899999999999999999999999999999999996 1 59999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++...|+..+++.++||+.++++..+...+.. .....+.+++|+|||++|+|||||+.+.+
T Consensus 88 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 163 (481)
T cd07141 88 YLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD----GDFFTYTRHEPVGVCGQIIPWNFPLLMAA 163 (481)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC----CCceEEEEEeceeEEEEEccChhHHHHHH
Confidence 99999999999999766545899999999999999988877544321 12346789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~ 243 (481)
T cd07141 164 WKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA 243 (481)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999998
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
++..+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++
T Consensus 244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 323 (481)
T cd07141 244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFD 323 (481)
T ss_pred hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8754799999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAV 601 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldea 601 (709)
+++.+.+++.+++++++.+|+++++||...+..| |++||
T Consensus 324 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 403 (481)
T cd07141 324 PKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEV 403 (481)
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHH
Confidence 6889999999999999999999999997532111 89999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
|+++|+++|||+++|||+|.+++.++++++++|+||||+....+..+||||+|.||+|+++|.+++.+|++ .|++++
T Consensus 404 i~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~---~k~v~~ 480 (481)
T cd07141 404 IERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTE---VKTVTI 480 (481)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhh---eEEEEE
Confidence 99999999999999999999999999999999999999877666788999999999999999999999988 577754
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-80 Score=702.53 Aligned_cols=421 Identities=40% Similarity=0.725 Sum_probs=390.2
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+.||||+|+.+.++.+++++||+||+++++++.++.+++++|+++|++||+ .|+++|.++|.++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~l 80 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK-RWAELKAAERKRYLHKIADLIEQHADEI 80 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 368999999876677899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHH-hhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD-KILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~-~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
++++++|+||++.++. .|+..+++.++||+..++ .+.+...+. + ....+.+++|+|||++|+|||||+.+.++
T Consensus 81 ~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~ 154 (488)
T TIGR02299 81 AVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPV----D-THLNYTVRVPVGPVGLITPWNAPFMLSTW 154 (488)
T ss_pred HHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccC----C-CceEEEEEEecceEEEECCCccHHHHHHH
Confidence 9999999999999998 599999999999999887 334433332 1 23467889999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|++.+
T Consensus 155 ~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 234 (488)
T TIGR02299 155 KIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234 (488)
T ss_pred HHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788899999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 235 a~-~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~ 313 (488)
T TIGR02299 235 AD-TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDP 313 (488)
T ss_pred Hh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCC
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC-------CC--------------------------------
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR-------PG-------------------------------- 596 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~-------~g-------------------------------- 596 (709)
+++++.+++.+++++++.+|+++++||...+. .|
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 393 (488)
T TIGR02299 314 ETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPF 393 (488)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEee
Confidence 68889999999999999999999999854210 01
Q ss_pred -CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 597 -DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 597 -dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
|++|||+++|+++|||+++|||+|.+.++++++++++|+||||+....++.+||||+|.||+|+++|.+++..|++
T Consensus 394 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~--- 470 (488)
T TIGR02299 394 KDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTE--- 470 (488)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhc---
Confidence 8999999999999999999999999999999999999999999887767788999999999999999999999999
Q ss_pred eeEEEEec
Q psy15158 676 SGTVFINT 683 (709)
Q Consensus 676 ~ktV~iN~ 683 (709)
.|+++++.
T Consensus 471 ~k~i~~~~ 478 (488)
T TIGR02299 471 TKNVALAL 478 (488)
T ss_pred eEEEEEec
Confidence 68888875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-80 Score=703.69 Aligned_cols=423 Identities=26% Similarity=0.424 Sum_probs=384.5
Q ss_pred CccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHH-c
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQ-N 327 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~-~ 327 (709)
...+||+|+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+ .|+++|..+|+++|++++++|++ +
T Consensus 32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK-EWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 3458999999864 56899999995 999999999999999999999999998 99999999999999999999996 8
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeeccc-CEEEEECCCCchHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPI-GVCGLITPWNYPLM 406 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~-GVv~~I~PwNfPl~ 406 (709)
+++|+.++++|+|||+.++...|+..+++.++||+.++.++.+...+. .+.+...++.++|+ |||++|+|||||+.
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~~GVv~~I~PwNfP~~ 185 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLS---SPAGVWNRLEYRPLEGFVYAVSPFNFTAI 185 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC---CCCCceeEEEEecCCceEEEECCcccHHH
Confidence 999999999999999998865688999999999999988876643321 12234567899998 99999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHH
Q psy15158 407 MLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486 (709)
Q Consensus 407 ~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I 486 (709)
+..++++||| +||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|
T Consensus 186 ~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i 264 (522)
T cd07123 186 GGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSL 264 (522)
T ss_pred HHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 9999999999 699999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHhcCCC------cEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHH
Q psy15158 487 MKSAAESNLK------KVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVK 560 (709)
Q Consensus 487 ~~~aa~~~~k------~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~ 560 (709)
++.+++ +++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++
T Consensus 265 ~~~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 343 (522)
T cd07123 265 WKQIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELK 343 (522)
T ss_pred HHHHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHh
Confidence 999985 555 8999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh---------------hcHHHHHHHHHHHHHHHhc-CCEEEECCccCCCCC----------------------------
Q psy15158 561 KM---------------NHKAHLDKLIDYCEKAKSE-GARLLIGGKRLDRPG---------------------------- 596 (709)
Q Consensus 561 ~l---------------~~~~~~~~i~~~i~~a~~~-Ga~vl~GG~~~~~~g---------------------------- 596 (709)
++ ++.++.+++.+++++++++ |+++++||......|
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred hCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 87 6888999999999999999 999999986432112
Q ss_pred -------CHHHHHHHHhcCC-CCCeEEEEccchHHHHHHHHhc--CeeeEEEcCCCCCC--CCCCCCCCCCCCCC-CccC
Q psy15158 597 -------DVDAVIKRANSTE-YGLASGIFTSDINKAMYFVDKI--DSGTVFINTYNKTD--VAAPFGGFKQSGFG-KDLD 663 (709)
Q Consensus 597 -------dldeaI~~~N~t~-yGLta~V~T~d~~~a~~va~~l--~aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~~G 663 (709)
|++|+|+++|++. |||+++|||+|.+++.++++++ ++|+||||+..... ..+||||+|.||+| +++|
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g 503 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGS 503 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCC
Confidence 3799999999985 9999999999999999999996 59999999876654 36899999999996 9999
Q ss_pred hHHHHHHHHHhceeEEEEec
Q psy15158 664 INKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~ 683 (709)
.+.+.+|++ .|+++++.
T Consensus 504 ~~~l~~~~~---~k~~~~~~ 520 (522)
T cd07123 504 PLNLLRWVS---PRTIKETF 520 (522)
T ss_pred HHHHHHhcc---eEEEEEec
Confidence 999999988 68888765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=753.81 Aligned_cols=475 Identities=23% Similarity=0.370 Sum_probs=414.5
Q ss_pred ccCCCcchhHHHHHH-------HHhhcC-ce-ec---cccccccc---hhhhhHHhHhhccCCCCCcchhhHHHHHHhhc
Q psy15158 179 QSGAGSMDVVRLIEE-------IKENLQ-IT-LQ---NEDVLMSS---VFRDFYIKVIEVSRQGDVSNQLNHESIKLNVN 243 (709)
Q Consensus 179 ~~~~~~~~~~~~~~~-------~~~~~~-~~-~~---ne~v~~~~---~f~~f~~~~r~~s~G~d~~~~~~~~~~~~~~~ 243 (709)
.-||+|..|.|++++ +.+.+. ++ .. +..-..|+ .=.+.+...|+||.|.|+.++..++.+..++.
T Consensus 559 EN~AN~sFv~~~~d~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~~r~ns~g~d~~~~~~~~~~~~~~~ 638 (1318)
T PRK11809 559 ENGANTSFVNRIADTSLPLDELVADPVEAVEKLAQQEGQLGLPHPKIPLPRDLYGKGRANSAGLDLANEHRLASLSSALL 638 (1318)
T ss_pred hcchhHHHHHHhccCCCCHHHHHHhHHHHHHhhccccccccCCCCCCCCchhhcCCCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 468999999999843 333333 21 00 00011111 12333455799999999999999998888876
Q ss_pred cccc-CCCccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHH
Q psy15158 244 KMDV-SFPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLA 321 (709)
Q Consensus 244 ~~~~-~~~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~A 321 (709)
.... .|...++|+|+. .++..++++||+| +++|++++.++.+++++|+++|++||+ .|+++|..+|+++|++++
T Consensus 639 ~~~~~~~~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~-~W~~~p~~eRa~iL~r~A 714 (1318)
T PRK11809 639 ASAHQKWQAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP-IWFATPPAERAAILERAA 714 (1318)
T ss_pred HHHcCCcccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHH
Confidence 6543 577778998853 2356899999999 679999999999999999999999998 999999999999999999
Q ss_pred HHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCC
Q psy15158 322 DLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPW 401 (709)
Q Consensus 322 dlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~Pw 401 (709)
++|++|+++|+.++++|+|||+.++.. ||.+++++||||+.++++... ...++|+|||++|+||
T Consensus 715 dlle~~~~eL~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~~---------------~~~~~PlGVV~~IsPW 778 (1318)
T PRK11809 715 DLMEAQMQTLMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPW 778 (1318)
T ss_pred HHHHHCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC---------------CceeecccEEEEECCC
Confidence 999999999999999999999999985 999999999999998764210 1358899999999999
Q ss_pred CchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChH
Q psy15158 402 NYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTV 481 (709)
Q Consensus 402 NfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~ 481 (709)
|||++++++++++||++||+||+|||++||+++..+++++++||+|+|++|+|+|++.++++.|+.||+|++|+||||++
T Consensus 779 NFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~ 858 (1318)
T PRK11809 779 NFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTE 858 (1318)
T ss_pred ccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHhc-----CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHH
Q psy15158 482 TGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV 556 (709)
Q Consensus 482 ~g~~I~~~aa~~-----~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~ 556 (709)
+|+.|++.++++ ..+|+++|+|||||+||++|||+|+|+++++.|+|.++||+|+|+++||||++|+|+|+++|+
T Consensus 859 tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~ 938 (1318)
T PRK11809 859 VARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLR 938 (1318)
T ss_pred HHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHH
Confidence 999999998863 127999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC---CCC----------------------
Q psy15158 557 TEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD---RPG---------------------- 596 (709)
Q Consensus 557 ~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~---~~g---------------------- 596 (709)
++++++ +++.+.+++.++|++++.+|++++.||.... ..|
T Consensus 939 ~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFG 1018 (1318)
T PRK11809 939 GAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFG 1018 (1318)
T ss_pred HHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccC
Confidence 999886 6889999999999999999999988763211 011
Q ss_pred -----------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCC--CCCCCCCCCCCCCCc-c
Q psy15158 597 -----------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDV--AAPFGGFKQSGFGKD-L 662 (709)
Q Consensus 597 -----------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~--~~PFGG~k~SG~G~~-~ 662 (709)
+++|+|+++|+++||||++|||+|.+++.++++++++|+||||++.++++ .+||||+|.||+|++ +
T Consensus 1019 PVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaG 1098 (1318)
T PRK11809 1019 PVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAG 1098 (1318)
T ss_pred ceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCC
Confidence 69999999999999999999999999999999999999999999988775 479999999999965 5
Q ss_pred ChHHHHHHHHH
Q psy15158 663 DINKAMYFVDK 673 (709)
Q Consensus 663 G~~~~~~ftr~ 673 (709)
|+.++.+|++.
T Consensus 1099 Gp~yL~~f~~~ 1109 (1318)
T PRK11809 1099 GPLYLYRLLAT 1109 (1318)
T ss_pred CHHHHHHHhcc
Confidence 66667777774
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-80 Score=701.89 Aligned_cols=422 Identities=34% Similarity=0.558 Sum_probs=388.7
Q ss_pred CccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
..+.||||+|+.+ +.+++++||+| |+++++++.++.+++++|+++|++||+ .|+++|..+|.++|++++++|++++
T Consensus 32 ~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 32 EYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP-TWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred ccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 3458999999863 46899999998 999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+.. .+...+++++|+|||++|+|||||+.+.
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 183 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMV----PGEDNRYVYRPLGVGAVISPWNFPLAIL 183 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCC----CCceeEEEEecceEEEEECCCChHHHHH
Confidence 99999999999999999985 999999999999999988865543321 2345688999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|++
T Consensus 184 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~ 263 (512)
T cd07124 184 AGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYE 263 (512)
T ss_pred HHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhc-----CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-
Q psy15158 489 SAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM- 562 (709)
Q Consensus 489 ~aa~~-----~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l- 562 (709)
.++.. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 264 ~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~ 343 (512)
T cd07124 264 RAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALK 343 (512)
T ss_pred HHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 98853 689999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC--CC------------------------------
Q psy15158 563 --------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--PG------------------------------ 596 (709)
Q Consensus 563 --------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--~g------------------------------ 596 (709)
+++.+.+++.++|++++. |+++++||...+. .|
T Consensus 344 ~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 422 (512)
T cd07124 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVI 422 (512)
T ss_pred CCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEE
Confidence 578899999999999988 8899999864321 11
Q ss_pred ---CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCC-CccChHHHHHH
Q psy15158 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFG-KDLDINKAMYF 670 (709)
Q Consensus 597 ---dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~~G~~~~~~f 670 (709)
|+||+|+++|+++|||+++|||+|.+.+.++++++++|+||||+..... ..+||||+|.||+| +++|.++++.|
T Consensus 423 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~ 502 (512)
T cd07124 423 KAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQF 502 (512)
T ss_pred ecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHh
Confidence 8999999999999999999999999999999999999999999876544 35899999999999 78889999989
Q ss_pred HHHhceeEEEEec
Q psy15158 671 VDKIDSGTVFINT 683 (709)
Q Consensus 671 tr~~~~ktV~iN~ 683 (709)
++ .|++++|+
T Consensus 503 t~---~k~v~~~~ 512 (512)
T cd07124 503 MQ---PKTVTENF 512 (512)
T ss_pred cc---EEEEEEeC
Confidence 88 68888763
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-80 Score=697.06 Aligned_cols=420 Identities=32% Similarity=0.484 Sum_probs=386.5
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
.||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|+
T Consensus 3 ~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 3 LFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP-AWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred ceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999876667899999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||+.++.. |+..+++.++|++..++.+.++..+.. . .+...+.+++|+|||++|+|||||+.+.++++
T Consensus 82 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~--~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 157 (478)
T cd07085 82 RLITLEHGKTLADARG-DVLRGLEVVEFACSIPHLLKGEYLENV--A-RGIDTYSYRQPLGVVAGITPFNFPAMIPLWMF 157 (478)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccC--C-CCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 9999999999999984 999999999999988877766544321 1 12346889999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~ 492 (709)
+|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.++.|+.||+|+.|+||||+.+|+.|++.+++
T Consensus 158 ~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (478)
T cd07085 158 PMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA 236 (478)
T ss_pred HHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999985 5689999999999999999999999999998875
Q ss_pred cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------
Q psy15158 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------- 562 (709)
Q Consensus 493 ~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------- 562 (709)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 237 -~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 315 (478)
T cd07085 237 -NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGA 315 (478)
T ss_pred -cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -----hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CCC---------------------------------CHHH
Q psy15158 563 -----NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RPG---------------------------------DVDA 600 (709)
Q Consensus 563 -----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~g---------------------------------dlde 600 (709)
+++.+.+++.+++++++++|+++++||.... ..| |+||
T Consensus 316 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~de 395 (478)
T cd07085 316 DMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDE 395 (478)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHH
Confidence 6889999999999999999999999986321 111 8999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCC--CccChHHHHHHHHHhcee
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFG--KDLDINKAMYFVDKIDSG 677 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G--~~~G~~~~~~ftr~~~~k 677 (709)
||+++|+++|||+++|||+|.++++++++++++|+||||++.... ..+||||+|.||+| +++|.+++++|++ .|
T Consensus 396 ai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~---~k 472 (478)
T cd07085 396 AIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQ---TK 472 (478)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcc---eE
Confidence 999999999999999999999999999999999999999875444 46899999999999 4789999999988 68
Q ss_pred EEEEe
Q psy15158 678 TVFIN 682 (709)
Q Consensus 678 tV~iN 682 (709)
+++++
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 88765
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-79 Score=696.44 Aligned_cols=426 Identities=37% Similarity=0.709 Sum_probs=392.4
Q ss_pred CCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 249 ~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ +.|+.+|.++|+++|++++++|++|
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 97 (494)
T PRK09847 18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAH 97 (494)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 334579999998876678899999999999999999999999999999999996 3599999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+++|++++++|+|||+.++...|+..+++.++||+..++++.++..+.. .+...+++++|+|||++|+|||||+.+
T Consensus 98 ~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (494)
T PRK09847 98 AEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS----SHELAMIVREPVGVIAAIVPWNFPLLL 173 (494)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC----CCceeEEEecceeEEEEECCCccHHHH
Confidence 9999999999999999987656999999999999999988877654421 223467899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.
T Consensus 174 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~ 253 (494)
T PRK09847 174 TCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLL 253 (494)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCC-CHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dA-Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---- 562 (709)
+.++..+++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 254 ~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 254 KDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGH 333 (494)
T ss_pred HHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 998744789999999999999999997 999999999999999999999999999999999999999999999886
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC-------------C----------C---------CHH
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR-------------P----------G---------DVD 599 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~-------------~----------g---------dld 599 (709)
+++.+.+++.+++++++.+| ++++||..... + | |++
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 412 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEE 412 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHH
Confidence 57889999999999999999 99998853211 0 0 899
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+++|+++|||+++|||+|.+++.++++++++|+||||+.+.+++.+||||+|.||+|+++|.+++..|++ .|++
T Consensus 413 eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~---~k~v 489 (494)
T PRK09847 413 QALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTE---LKTI 489 (494)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhc---eEEE
Confidence 9999999999999999999999999999999999999999987777788999999999999999999999988 6888
Q ss_pred EEe
Q psy15158 680 FIN 682 (709)
Q Consensus 680 ~iN 682 (709)
+++
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 754
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-79 Score=696.07 Aligned_cols=423 Identities=48% Similarity=0.842 Sum_probs=389.8
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhc-ccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE-WSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~-W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.+.||||+|+.+.++.+++++||+||+++++++.++.+++++|+++|++||+ . |+.+|.++|.++|++++++|+++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~-~~w~~~~~~~R~~iL~~~a~~l~~~~~ 86 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE-SWWSKVTGEERGELLDKLADLVEKNRD 86 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-hhHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999865567899999999999999999999999999999999997 6 8899999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||..++...|+..+++.++|++.++++..+...+.. .+...+..++|+|||++|+|||||+.+.+
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~----~~~~~~~~~~P~GvV~~I~p~N~P~~~~~ 162 (484)
T cd07144 87 LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS----PNKLAYTLHEPYGVCGQIIPWNYPLAMAA 162 (484)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC----CCceEEEEEecceEEEEECcCCCHHHHHH
Confidence 99999999999998776546999999999999999988866544321 22346788999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|.+.
T Consensus 163 ~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~ 242 (484)
T cd07144 163 WKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKA 242 (484)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHh-h------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-M------ 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~-l------ 562 (709)
+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +
T Consensus 243 a~~-~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~ 321 (484)
T cd07144 243 AAQ-NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPF 321 (484)
T ss_pred HHh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCC
Confidence 885 78999999999999999999999999999999999999999999999999999999999999999874 3
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC---CCC---------------------------------C
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD---RPG---------------------------------D 597 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~---~~g---------------------------------d 597 (709)
++..+.+++.+++++++.+|+++++||.... ..| |
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 401 (484)
T cd07144 322 DDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKT 401 (484)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCC
Confidence 6788999999999999999999999886421 011 8
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhcee
Q psy15158 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSG 677 (709)
Q Consensus 598 ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~k 677 (709)
++|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+..++.+||||+|.||+|+++|.++++.|++ .|
T Consensus 402 ~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k 478 (484)
T cd07144 402 YEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQ---TK 478 (484)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhc---eE
Confidence 999999999999999999999999999999999999999999987767778999999999999999999999998 57
Q ss_pred EEEEe
Q psy15158 678 TVFIN 682 (709)
Q Consensus 678 tV~iN 682 (709)
+++++
T Consensus 479 ~v~~~ 483 (484)
T cd07144 479 AVHIN 483 (484)
T ss_pred EEEEe
Confidence 77654
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=695.54 Aligned_cols=419 Identities=35% Similarity=0.606 Sum_probs=388.1
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
.||||+|+.+. +..++++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|++|+++|+
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela 78 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK-EWRKVPAPRRGEIVRQIGEALRKKKEALG 78 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 37999999765 57899999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||+.++.. |+..+++.++|++..++++.+...+.. .+ +...+++++|+|||++|+|||||+.+.++++
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~-~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~ 154 (478)
T cd07086 79 RLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSE--RP-GHRLMEQWNPLGVVGVITAFNFPVAVPGWNA 154 (478)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC--CC-CceEEEEEecceeEEEECCCCcHHHHHHHHH
Confidence 9999999999999985 999999999999999988776544321 12 2346788999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHc----CCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eA----GlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
++||++||+||+|||+.+|+++..+++++.++ |+|+|++|+++|++. +++.|..||+++.|.||||+++|+.|++
T Consensus 155 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~ 233 (478)
T cd07086 155 AIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGE 233 (478)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999765 8999999999999999999999999999
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 234 ~aa~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 312 (478)
T cd07086 234 TVAR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPL 312 (478)
T ss_pred HHhc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCC
Confidence 9885 789999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC--CC---------------------------------CH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--PG---------------------------------DV 598 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--~g---------------------------------dl 598 (709)
+++.+++++.+++++++++|+++++||..... .| |+
T Consensus 313 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~ 392 (478)
T cd07086 313 DEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSL 392 (478)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCH
Confidence 58899999999999999999999999864321 11 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHh--cCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDK--IDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~--l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
||||+++|+++|||+++|||+|.+++++++++ +++|+||||+.+... +.+||||+|.||+|+++|.++++.|++
T Consensus 393 deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~--- 469 (478)
T cd07086 393 EEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMR--- 469 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhc---
Confidence 99999999999999999999999999999999 999999999976654 578999999999999999999998988
Q ss_pred eeEEEEe
Q psy15158 676 SGTVFIN 682 (709)
Q Consensus 676 ~ktV~iN 682 (709)
.|+++++
T Consensus 470 ~k~i~~~ 476 (478)
T cd07086 470 RSTCTIN 476 (478)
T ss_pred eEEEEEe
Confidence 6888876
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=694.30 Aligned_cols=422 Identities=54% Similarity=0.901 Sum_probs=389.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcc--cCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEW--SRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W--~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
.++||||+|+.+.++..++++||+||+++++++.++.++++.++++|++||+ .| +.+|.++|.++|++++++|++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFE-TGWWRKMDPRERGRLLNKLADLIERDR 82 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcc-cCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 3579999998766677899999999999999999999999999999999998 74 59999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
++|++++++|+|||..++...|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.
T Consensus 83 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 158 (476)
T cd07091 83 DELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID----GNFLAYTRREPIGVCGQIIPWNFPLLML 158 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC----CCceEEEEEeceeEEEEECCCcCHHHHH
Confidence 999999999999998766556999999999999999888766544321 2345678999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|++
T Consensus 159 ~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 159 AWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.++.++++|+++|+|||||+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~ 318 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPF 318 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 98865889999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDA 600 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dlde 600 (709)
++..+.+++.+++++++.+|+++++||......+ |++|
T Consensus 319 ~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 319 DPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 5788999999999999999999999986431111 8999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+.....+||||+|+||+|+++|.+++.+|++ .|+++
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~---~k~~~ 475 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQ---VKAVT 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhc---eeEEe
Confidence 999999999999999999999999999999999999999977766788999999999999999999999988 56664
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-79 Score=694.52 Aligned_cols=418 Identities=38% Similarity=0.658 Sum_probs=385.5
Q ss_pred cceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+.||||+|+.+. ..++++||+| ++++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++
T Consensus 2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP-AWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 478999998753 3479999995 999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+..+.++.+...+.. . .+...++.++|+|||++|+|||||+.+.++
T Consensus 79 la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~--~-~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~ 154 (473)
T cd07097 79 LARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPST--R-PGVEVETTREPLGVVGLITPWNFPIAIPAW 154 (473)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC--C-CCceEEEEEEeeeeEEEEcccChHHHHHHH
Confidence 999999999999999985 999999999999999888766543321 1 224467899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 155 ~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 234 (473)
T cd07097 155 KIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAA 234 (473)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 235 a~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 313 (473)
T cd07097 235 AA-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDE 313 (473)
T ss_pred hc-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC--CC---------------------------------CHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--PG---------------------------------DVDA 600 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--~g---------------------------------dlde 600 (709)
+++.+++++.+++++++++|+++++||...+. .| |++|
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 393 (473)
T cd07097 314 GVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDE 393 (473)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHH
Confidence 58899999999999999999999999864321 12 8999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCC-CccChHHHHHHHHHhceeE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFG-KDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G-~~~G~~~~~~ftr~~~~kt 678 (709)
||+++|+++|||+++|||+|.+++.++++++++|+||||+..... ..+||||+|.||+| +++|.+++.+|++ .|+
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~---~k~ 470 (473)
T cd07097 394 ALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTT---IKT 470 (473)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhc---eeE
Confidence 999999999999999999999999999999999999999866543 57899999999999 8999999999998 577
Q ss_pred EE
Q psy15158 679 VF 680 (709)
Q Consensus 679 V~ 680 (709)
++
T Consensus 471 v~ 472 (473)
T cd07097 471 VY 472 (473)
T ss_pred Ee
Confidence 64
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-79 Score=691.27 Aligned_cols=407 Identities=29% Similarity=0.470 Sum_probs=375.6
Q ss_pred CeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHH
Q psy15158 266 SSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTL 345 (709)
Q Consensus 266 ~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~ 345 (709)
+.++++||+||++|++++.++.+++++|+++|++||+ .|++++.++|+++|++++++|++|+++|++++++|+|||..+
T Consensus 7 ~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 7 THAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR-DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 4688999999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEee
Q psy15158 346 ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425 (709)
Q Consensus 346 a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlK 425 (709)
+.. |+..+++.++||+..+.+..+..... .+ +...+++++|+|||++|+|||||+++.+++++|||++||+||+|
T Consensus 86 a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~K 160 (462)
T PRK13968 86 ARA-EVAKSANLCDWYAEHGPAMLKAEPTL---VE-NQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLK 160 (462)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhhCCcccc---CC-CceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 985 99999999999999887765432111 11 23567889999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCc
Q psy15158 426 PSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505 (709)
Q Consensus 426 Ps~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGk 505 (709)
||+.+|+++..+.+++.++|+|+|++|+|+|++.. +..|+.||+++.|+||||+++|+.|++.++. +++|+++|+|||
T Consensus 161 Ps~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk 238 (462)
T PRK13968 161 HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGS 238 (462)
T ss_pred CCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCC
Confidence 99999999999999999999999999999986654 4569999999999999999999999999885 899999999999
Q ss_pred ccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHH
Q psy15158 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDK 570 (709)
Q Consensus 506 np~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~ 570 (709)
||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++ ++..+.++
T Consensus 239 ~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~ 318 (462)
T PRK13968 239 DPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDE 318 (462)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999876 56888999
Q ss_pred HHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEE
Q psy15158 571 LIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIF 617 (709)
Q Consensus 571 i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~ 617 (709)
+.+++++++.+|+++++||.....+| |+||||+++|+++|||+++||
T Consensus 319 ~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~ 398 (462)
T PRK13968 319 LHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIF 398 (462)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEE
Confidence 99999999999999999986432111 999999999999999999999
Q ss_pred ccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 618 T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
|+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.+++++|++ .|+++++.
T Consensus 399 t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~---~k~v~~~~ 461 (462)
T PRK13968 399 TTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCN---IQTVWKDR 461 (462)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcc---eeEEEEec
Confidence 9999999999999999999999987766788999999999999999999999998 68887653
|
|
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-79 Score=691.21 Aligned_cols=417 Identities=32% Similarity=0.573 Sum_probs=381.6
Q ss_pred eecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q psy15158 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELAT 333 (709)
Q Consensus 254 ~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~ 333 (709)
+|||+|+.+ +.+++++||+||+++++++.++.+++++|+++|++||+ .|+++|.++|.++|++++++|++++++|++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 78 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK-EWRDVPAPKRGEIVRQIGDALRKKKEALGK 78 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999874 46899999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHH
Q psy15158 334 IESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMA 413 (709)
Q Consensus 334 l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ia 413 (709)
++++|+|||+.++.. |+..+++.++|++...+.+.+...+.. .+ +...+..++|+|||++|+|||||+.+.+++++
T Consensus 79 ~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 154 (474)
T cd07130 79 LVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIPSE--RP-GHRMMEQWNPLGVVGVITAFNFPVAVWGWNAA 154 (474)
T ss_pred HHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCC--CC-CceEEEEEecceeEEEEccCCCHHHHHHHHhh
Confidence 999999999999984 999999999999988877766543321 12 23457889999999999999999999999999
Q ss_pred HHHHcCCEEEeeCCCCchHHHHHHHHH----HHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 414 PCLAAGNTVVMKPSEVSPLTALKLAEL----SVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 414 pALaaGNtVVlKPs~~tplta~~l~el----l~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
+||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|+ .+.++.|+.||+|++|.||||+++|+.|++.
T Consensus 155 ~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~ 233 (474)
T cd07130 155 IALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQA 233 (474)
T ss_pred HHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999887776 46899999999999985 4579999999999999999999999999998
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 234 aa~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~ 312 (474)
T cd07130 234 VAA-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLD 312 (474)
T ss_pred HHh-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCC
Confidence 885 789999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC--------------------------------CHHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------DVDAVI 602 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------dldeaI 602 (709)
+++.+.+++.+++++++++|+++++||...+.+| |++|||
T Consensus 313 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai 392 (474)
T cd07130 313 DGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAI 392 (474)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 6889999999999999999999999997432111 999999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHh--cCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDK--IDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~--l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
+++|+++|||+++|||+|.+++.+++++ +++|+||||+.+... +.+||||+|.||+|+++|.+++.+|++ .|++
T Consensus 393 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~---~k~~ 469 (474)
T cd07130 393 AWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMR---RSTC 469 (474)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhh---eEEE
Confidence 9999999999999999999999999977 999999999865544 578999999999999999999999999 5777
Q ss_pred EEe
Q psy15158 680 FIN 682 (709)
Q Consensus 680 ~iN 682 (709)
+++
T Consensus 470 ~~~ 472 (474)
T cd07130 470 TIN 472 (474)
T ss_pred EEe
Confidence 765
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-79 Score=691.61 Aligned_cols=419 Identities=31% Similarity=0.460 Sum_probs=381.1
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
.||||+|+.+ ++.+++++||+||+++++++.++.+++++++++|++||+ .|+++|..+|.++|++++++|++|+++|+
T Consensus 3 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP-AWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred ceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6899999875 356899999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||+.++.. |+..+++.++|++.++.+..+...+. .+ +...+++++|+|||++|+|||||+.+..+++
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 155 (487)
T PRK09457 81 EVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSE---MA-DGAAVLRHRPHGVVAVFGPYNFPGHLPNGHI 155 (487)
T ss_pred HHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecc---CC-CceeEEEEeccEEEEEECCCchHHHHHHHHH
Confidence 9999999999999985 99999999999998877666543321 12 2346788999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~ 492 (709)
+|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+|+.|+||||+++|+.|++.++.
T Consensus 156 ~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 234 (487)
T PRK09457 156 VPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234 (487)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998 56789999999999999999999999999998876
Q ss_pred cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccH-HHHHHHHHHHHHhh---------
Q psy15158 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY-DAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 493 ~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~-d~fl~~L~~~~~~l--------- 562 (709)
+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++ |+|+++|+++++++
T Consensus 235 ~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~ 314 (487)
T PRK09457 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEP 314 (487)
T ss_pred cCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCC
Confidence 56788999999999999999999999999999999999999999999999999998 99999999999775
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC--------------------------------CHHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------DVDAVIK 603 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------dldeaI~ 603 (709)
++.++.+++.+++++++++|+++++||...+..+ |+||||+
T Consensus 315 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 394 (487)
T PRK09457 315 QPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIR 394 (487)
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 4678999999999999999999999764321111 8999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++|||+|.++++++++++++|+|+||+..... ..+||||+|+||+|++.| ....+|++ .|+++++
T Consensus 395 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g-~~~~~~~~---~k~~~~~ 470 (487)
T PRK09457 395 LANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSA-YYAADYCA---YPMASLE 470 (487)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCc-hhHhhhee---eeEEEEe
Confidence 999999999999999999999999999999999999876554 468999999999999988 45555666 5888887
Q ss_pred c
Q psy15158 683 T 683 (709)
Q Consensus 683 ~ 683 (709)
.
T Consensus 471 ~ 471 (487)
T PRK09457 471 S 471 (487)
T ss_pred c
Confidence 5
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-79 Score=691.50 Aligned_cols=413 Identities=45% Similarity=0.781 Sum_probs=384.6
Q ss_pred eecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q psy15158 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELAT 333 (709)
Q Consensus 254 ~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~ 333 (709)
||||+|+.+.++.+++++||+||+++++++.++.+++++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 79 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG-EWASMTPEERGRILRRIAELIRERNEELAK 79 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6899999766678999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHH
Q psy15158 334 IESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMA 413 (709)
Q Consensus 334 l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ia 413 (709)
++++|+|||+.++...|+..+++.++|++..+++..+...+.. .+ ...+..++|+|||++|+|||||+.+.+++++
T Consensus 80 ~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 155 (467)
T TIGR01804 80 LETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLP--IP--SFSYTIREPLGVCVGIGAWNYPLQIASWKIA 155 (467)
T ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCC--CC--ceEEEEEeeeeEEEEECCCchHHHHHHHHHH
Confidence 9999999999998545999999999999999888766544322 11 3457889999999999999999999999999
Q ss_pred HHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc
Q psy15158 414 PCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493 (709)
Q Consensus 414 pALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~ 493 (709)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.+++
T Consensus 156 ~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~- 234 (467)
T TIGR01804 156 PALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD- 234 (467)
T ss_pred HHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999878899999999999999999999999999999885
Q ss_pred CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----------
Q psy15158 494 NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------- 562 (709)
Q Consensus 494 ~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------- 562 (709)
+++|+++|+|||||+||++|||++.|++.++.++|.++||.|++++|||||++++|+|+++|+++++++
T Consensus 235 ~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 314 (467)
T TIGR01804 235 HLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATE 314 (467)
T ss_pred cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCc
Confidence 789999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ----hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC----CC---------------------------------CHHHH
Q psy15158 563 ----NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR----PG---------------------------------DVDAV 601 (709)
Q Consensus 563 ----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dldea 601 (709)
+++.+.+++.+++++++.+|+++++||..... .| |+|||
T Consensus 315 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 394 (467)
T TIGR01804 315 MGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEV 394 (467)
T ss_pred cCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHH
Confidence 57889999999999999999999999864220 11 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHH
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVD 672 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr 672 (709)
|+++|+++|||+++|||+|.+++.++++++++|+||||+++..+..+||||+|+||+|+++|.+++..|++
T Consensus 395 i~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~ 465 (467)
T TIGR01804 395 IARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTE 465 (467)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhc
Confidence 99999999999999999999999999999999999999987777778999999999999999999998887
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-79 Score=691.97 Aligned_cols=421 Identities=41% Similarity=0.748 Sum_probs=390.5
Q ss_pred eecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 254 ~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
||||+|+.+.++.+++++||+||+++++++.++.+++++|+++|++||+ +.|+++|..+|.++|++++++|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5899998765567899999999999999999999999999999999996 359999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||..++.. |+..+++.++|++.++++..+...+.. .+...+++++|+|||++|+|||||+...++++
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 155 (482)
T cd07119 81 RLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVP----PHVISRTVREPVGVCGLITPWNYPLLQAAWKL 155 (482)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCC----CCceEEEEEeeeeeEEEEcCCchHHHHHHHHH
Confidence 9999999999999985 999999999999999887666543321 23456789999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~ 492 (709)
++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|+.||++++|.||||+.+|+.|++.+++
T Consensus 156 ~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~ 235 (482)
T cd07119 156 APALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG 235 (482)
T ss_pred HHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999877799999999999999999999999999999885
Q ss_pred cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------
Q psy15158 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------- 562 (709)
Q Consensus 493 ~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------- 562 (709)
+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++
T Consensus 236 -~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 314 (482)
T cd07119 236 -NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADT 314 (482)
T ss_pred -cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -----hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC----CC---------------------------------CHHH
Q psy15158 563 -----NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR----PG---------------------------------DVDA 600 (709)
Q Consensus 563 -----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dlde 600 (709)
+++.+.+++.+++++++++|+++++||..... .| |+||
T Consensus 315 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~de 394 (482)
T cd07119 315 EMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEE 394 (482)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHH
Confidence 57889999999999999999999999864210 11 8999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.+++.++++++++|+|+||+.......+||||+|.||+|+++|.+++..|++ .|+++
T Consensus 395 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~---~k~v~ 471 (482)
T cd07119 395 AIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQE---TKHIN 471 (482)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhc---eEEEE
Confidence 999999999999999999999999999999999999999876666678999999999999999999999988 68998
Q ss_pred Eec
Q psy15158 681 INT 683 (709)
Q Consensus 681 iN~ 683 (709)
++.
T Consensus 472 ~~~ 474 (482)
T cd07119 472 INL 474 (482)
T ss_pred Eec
Confidence 875
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-79 Score=694.49 Aligned_cols=421 Identities=30% Similarity=0.535 Sum_probs=384.1
Q ss_pred ccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.+.||||+|+.+ +.+++++||+| ++++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|+++++
T Consensus 33 ~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (511)
T TIGR01237 33 YPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE-AWKKTPVRERAGILRKAAAIMERRRH 109 (511)
T ss_pred cceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 457999999964 35689999995 999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++.. |+..+++.++||+..+++..+...+.. +.+...+++++|+|||++|+|||||+++.+
T Consensus 110 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 110 ELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLD---IEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 9999999999999999885 999999999999999988776433221 223456788999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999998
Q ss_pred HHh-----cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--
Q psy15158 490 AAE-----SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-- 562 (709)
Q Consensus 490 aa~-----~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-- 562 (709)
++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 873 3789999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------
Q psy15158 563 -------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------- 596 (709)
Q Consensus 563 -------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------- 596 (709)
+++.+.+++.+++++++.+| ++++||......|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 57889999999999999888 8888875321111
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCCC-ccChHHHHHHHHH
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFGK-DLDINKAMYFVDK 673 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G~-~~G~~~~~~ftr~ 673 (709)
|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+...+. ..+||||+|.||+|+ .+|.+++.+|++
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~- 503 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQ- 503 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcc-
Confidence 9999999999999999999999999999999999999999999876543 358999999999995 678888888888
Q ss_pred hceeEEEEe
Q psy15158 674 IDSGTVFIN 682 (709)
Q Consensus 674 ~~~ktV~iN 682 (709)
.|+++.+
T Consensus 504 --~k~v~~~ 510 (511)
T TIGR01237 504 --PKTVTEN 510 (511)
T ss_pred --eEEEEEe
Confidence 6788765
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-79 Score=693.99 Aligned_cols=421 Identities=31% Similarity=0.504 Sum_probs=382.3
Q ss_pred ccceecCeEeeCCCCCeeeeecCC-CCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPA-NESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~-tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.++||||+|+.+ +.+++++||+ ||++|++++.++.+++++|+++|++||+ .|+++|.++|+++|++++++|+++++
T Consensus 37 ~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ 113 (514)
T PRK03137 37 YPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE-TWKKWSPEDRARILLRAAAIIRRRKH 113 (514)
T ss_pred cceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 458999999964 4679999999 6999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++.. |+..+++.++||+..+.++.+...... ..+...+++++|+|||++|+|||||+.+.+
T Consensus 114 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~ 189 (514)
T PRK03137 114 EFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMA 189 (514)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence 9999999999999999985 999999999999999887653221111 123456889999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 269 (514)
T PRK03137 190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER 269 (514)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhc-----CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--
Q psy15158 490 AAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-- 562 (709)
Q Consensus 490 aa~~-----~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-- 562 (709)
++.. ++||+++|+|||||+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++
T Consensus 270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~ 349 (514)
T PRK03137 270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV 349 (514)
T ss_pred HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence 8741 689999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------C
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------D 597 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------d 597 (709)
+++.+.+++.+++++++.+ +++++||......| |
T Consensus 350 g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 428 (514)
T PRK03137 350 GNPEDNAYMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKD 428 (514)
T ss_pred CCCCCccCcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCC
Confidence 5788999999999999887 59999986432111 8
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCC-CccChHHHHHHHHHh
Q psy15158 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFG-KDLDINKAMYFVDKI 674 (709)
Q Consensus 598 ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~~G~~~~~~ftr~~ 674 (709)
++|||+++|+++|||+++|||+|.+++.++++++++|+||||+.+... ..+||||+|.||+| +++|.+.+..|++
T Consensus 429 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~-- 506 (514)
T PRK03137 429 FDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQ-- 506 (514)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhce--
Confidence 999999999999999999999999999999999999999999876554 35799999999999 6778878888887
Q ss_pred ceeEEEEe
Q psy15158 675 DSGTVFIN 682 (709)
Q Consensus 675 ~~ktV~iN 682 (709)
.|+++..
T Consensus 507 -~k~v~~~ 513 (514)
T PRK03137 507 -AKTVSEM 513 (514)
T ss_pred -EEEEEEe
Confidence 5777653
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-79 Score=686.21 Aligned_cols=406 Identities=32% Similarity=0.542 Sum_probs=374.1
Q ss_pred eeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH
Q psy15158 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347 (709)
Q Consensus 268 ~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~ 347 (709)
++++||+||+++++++.++.+++++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 81 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR-DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK 81 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH
Confidence 67899999999999999999999999999999998 99999999999999999999999999999999999999999997
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCC
Q psy15158 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427 (709)
Q Consensus 348 ~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs 427 (709)
. |+..+++.++||+..+++..+........ ......+++++|+|||++|+|||||+++.++++++||++||+||+|||
T Consensus 82 ~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 82 A-EALKCAKGFRYYAEHAEALLADEPADAAA-VGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhCCccccccC-CCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 5 99999999999999988776543221100 112346788999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc
Q psy15158 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507 (709)
Q Consensus 428 ~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp 507 (709)
+.+|+++.++++++.++|+|+|++|+|++ +.+.+..|+.||++++|+||||+++|+.|++.+++ +++|+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence 99999999999999999999999999986 34577889999999999999999999999998875 89999999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++ +++.+.+++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887 5778999999
Q ss_pred HHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEcc
Q psy15158 573 DYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTS 619 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~ 619 (709)
+++++++.+|+++++||...+.+| |++|+|+++|+++|||+++|||+
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 397 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR 397 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 999999999999999997532112 89999999999999999999999
Q ss_pred chHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 620 d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
|.+++.++++++++|+||||+++...+.+||||+|.||+|+++|.+.++.|++ .|++++
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k~v~~ 456 (457)
T PRK09406 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCN---IKTVWI 456 (457)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhc---eEEEEe
Confidence 99999999999999999999988777789999999999999999999999988 577753
|
|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-79 Score=687.83 Aligned_cols=418 Identities=40% Similarity=0.680 Sum_probs=388.0
Q ss_pred eecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q psy15158 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELAT 333 (709)
Q Consensus 254 ~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~ 333 (709)
||||+|+.+.+++.++++||+||+++++++.++.+++++|+++|++||+ .|+++|.++|.++|++++++|++++++|++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 79 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK-AWERLPAIERAAYLRKLADLIRENADELAK 79 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6899998765678899999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHH
Q psy15158 334 IESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMA 413 (709)
Q Consensus 334 l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ia 413 (709)
++++|+|||..++.. |+..+++.++|++.++.++.+...+.. ..+...+.+++|+|||++|+|||||+.+.+++++
T Consensus 80 ~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 155 (468)
T cd07088 80 LIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSD---RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLA 155 (468)
T ss_pred HHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCc---cccceeEEEEecceeEEEEccCchHHHHHHHHHH
Confidence 999999999999985 999999999999999888766544321 1124567889999999999999999999999999
Q ss_pred HHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc
Q psy15158 414 PCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493 (709)
Q Consensus 414 pALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~ 493 (709)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|.||||+++|+.|++.+++
T Consensus 156 ~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~- 234 (468)
T cd07088 156 PALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE- 234 (468)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999877899999999999999999999999999999885
Q ss_pred CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----------
Q psy15158 494 NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------- 562 (709)
Q Consensus 494 ~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------- 562 (709)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 235 ~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 314 (468)
T cd07088 235 NITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATD 314 (468)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ----hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-CCC---------------------------------CHHHHHHH
Q psy15158 563 ----NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-RPG---------------------------------DVDAVIKR 604 (709)
Q Consensus 563 ----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~~g---------------------------------dldeaI~~ 604 (709)
+++.+.+++.+++++++.+|+++++||...+ ..| |++|||++
T Consensus 315 ~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 394 (468)
T cd07088 315 MGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIEL 394 (468)
T ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHH
Confidence 5889999999999999999999999986422 011 89999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+|+++|||+++|||+|.++++++++++++|+||||+........||||+|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~---~k~v~ 467 (468)
T cd07088 395 ANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQ---TKVVY 467 (468)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhc---eeEEe
Confidence 99999999999999999999999999999999999987666667999999999999999999999988 57764
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-79 Score=685.99 Aligned_cols=416 Identities=35% Similarity=0.591 Sum_probs=382.8
Q ss_pred CeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH
Q psy15158 257 GEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIES 336 (709)
Q Consensus 257 G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~ 336 (709)
|+|+.+.++..++++||+||+++++++.++.+++++|+++|++|++ .|+++|..+|.++|++++++|++++++|+++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~ 79 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK-EWAATLPQERAEILEKAAQILEERRDEIVEWLI 79 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 5677665567899999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHH
Q psy15158 337 LDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCL 416 (709)
Q Consensus 337 ~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapAL 416 (709)
+|+||++.++.. |+..+++.++|++.+++++.+...+.. ..+...+++++|+|||++|+|||||+.+.+++++|||
T Consensus 80 ~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 155 (465)
T cd07151 80 RESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSD---VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPAL 155 (465)
T ss_pred HHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 999999999885 999999999999998887766544321 1233467889999999999999999999999999999
Q ss_pred HcCCEEEeeCCCCchHHH-HHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCC
Q psy15158 417 AAGNTVVMKPSEVSPLTA-LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL 495 (709)
Q Consensus 417 aaGNtVVlKPs~~tplta-~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~ 495 (709)
++||+||+|||+.+|+++ ..+.+++.++|+|+|++|+|+|++.++++.|+.||.++.|.||||+.+|+.|++.+++ ++
T Consensus 156 aaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 234 (465)
T cd07151 156 ALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HL 234 (465)
T ss_pred HcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cC
Confidence 999999999999999996 7899999999999999999999878899999999999999999999999999999885 89
Q ss_pred CcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------------
Q psy15158 496 KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------------- 562 (709)
Q Consensus 496 k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------------- 562 (709)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 235 ~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~g 314 (465)
T cd07151 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVG 314 (465)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHHHHhcCCC
Q psy15158 563 --NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIKRANSTEY 610 (709)
Q Consensus 563 --~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~~N~t~y 610 (709)
+++.+.+++.+++++++.+|+++++||.... .+ | |+||||+++|+++|
T Consensus 315 pli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 394 (465)
T cd07151 315 PLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEY 394 (465)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCc
Confidence 5888999999999999999999999884210 00 1 99999999999999
Q ss_pred CCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 611 GLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
||+++|||+|.+++.++++++++|+|+||+.+..+ +.+||||+|.||+|+++|.++++.|++ .|++++
T Consensus 395 gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k~~~~ 463 (465)
T cd07151 395 GLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTT---DKWISV 463 (465)
T ss_pred cceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhc---eEEEEe
Confidence 99999999999999999999999999999987654 578999999999999999999999998 688765
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-79 Score=686.30 Aligned_cols=414 Identities=39% Similarity=0.630 Sum_probs=382.4
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
+||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|++|+++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la 79 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP-AWSATSVEERAALLERIAEAYEARADELA 79 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999876667899999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||..++...|+..+++.++|++..++++.+... . ...+.+++|+|||++|+|||||+.+.++++
T Consensus 80 ~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 151 (466)
T cd07138 80 QAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-------R-GNSLVVREPIGVCGLITPWNWPLNQIVLKV 151 (466)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-------C-ceEEEEEeecceEEEECCCccHHHHHHHHH
Confidence 99999999999888655899999999999998876654321 1 235678999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~ 492 (709)
+|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.++.
T Consensus 152 ~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 152 APALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred HHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999885
Q ss_pred cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------
Q psy15158 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------- 562 (709)
Q Consensus 493 ~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------- 562 (709)
+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++
T Consensus 232 -~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 310 (466)
T cd07138 232 -TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPAT 310 (466)
T ss_pred -cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999775
Q ss_pred -----hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC---CC---------------------------------CHHHH
Q psy15158 563 -----NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR---PG---------------------------------DVDAV 601 (709)
Q Consensus 563 -----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~---~g---------------------------------dldea 601 (709)
+++.+.+++.+++++++++|+++++||..... .| |+|||
T Consensus 311 ~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ea 390 (466)
T cd07138 311 TLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEA 390 (466)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHH
Confidence 67889999999999999999999999852110 01 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
|+++|+++|||+++|||+|.+++.++++++++|+||||+.. ..+.+||||+|.||+|+++|.+++.+|++ .|+++
T Consensus 391 i~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~---~k~v~ 465 (466)
T cd07138 391 IAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLE---VKSIQ 465 (466)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcc---eeEEe
Confidence 99999999999999999999999999999999999999864 45678999999999999999999999988 46553
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-78 Score=688.10 Aligned_cols=437 Identities=26% Similarity=0.398 Sum_probs=397.9
Q ss_pred hHHhHhhccCCCCCcchhhHHHHHHhhccccc-CCCccceecCeEeeCCCCCeeeeecCCCC-CeEEEEeCCChhhHHHH
Q psy15158 216 FYIKVIEVSRQGDVSNQLNHESIKLNVNKMDV-SFPNQLFINGEFVNSVGGSSMECINPANE-STICSVQMANSDDVDIA 293 (709)
Q Consensus 216 f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~-~~~~~~~I~G~~v~s~~~~~~~v~nP~tg-e~i~~v~~a~~~dv~~A 293 (709)
++.+-|+|+.|.|+..+.+++.+..++..+.. .+..++||||+|+. ++..++++||+|+ ++|++++.++.+|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~a 79 (500)
T TIGR01238 2 LYGEGRKNSLGIDLDNESELKPLEAQIHAWADKTWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAA 79 (500)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHH
Confidence 44567899999999999999999888877654 56667999999986 4678999999996 79999999999999999
Q ss_pred HHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccc
Q psy15158 294 ALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373 (709)
Q Consensus 294 v~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~ 373 (709)
+++|++||+ .|+++|..+|+++|++++++|++++++|++++++|+|||+.++.. |+..+++.++||+..+++..+
T Consensus 80 v~~A~~a~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~--- 154 (500)
T TIGR01238 80 IDSAQQAFP-TWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLG--- 154 (500)
T ss_pred HHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC---
Confidence 999999998 999999999999999999999999999999999999999999985 999999999999998755431
Q ss_pred cccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEE
Q psy15158 374 PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINI 453 (709)
Q Consensus 374 p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~v 453 (709)
...++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 155 ------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~ 222 (500)
T TIGR01238 155 ------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQL 222 (500)
T ss_pred ------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEE
Confidence 13589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCC---CcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 454 LPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL---KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 454 v~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~---k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~ 530 (709)
++|++.++++.|+.||+++.|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 223 v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~n 301 (500)
T TIGR01238 223 LPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDS 301 (500)
T ss_pred EecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhc
Confidence 999877899999999999999999999999999999986 43 79999999999999999999999999999999999
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCc---cC
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGK---RL 592 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~---~~ 592 (709)
+||.|+|++|||||++++|+|+++|+++++++ +++.+.+++.+++++++..|++++.++. ..
T Consensus 302 sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~ 381 (500)
T TIGR01238 302 AGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRA 381 (500)
T ss_pred CCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCC
Confidence 99999999999999999999999999999886 6888999999999999999998874321 10
Q ss_pred C--------------------CC--C-----------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEc
Q psy15158 593 D--------------------RP--G-----------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639 (709)
Q Consensus 593 ~--------------------~~--g-----------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN 639 (709)
. .+ | ++||||+++|+++|||+++|||+|.+.+.++++++++|+||||
T Consensus 382 ~~~g~f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN 461 (500)
T TIGR01238 382 CQHGTFVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVN 461 (500)
T ss_pred CCCCeeEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEEC
Confidence 0 00 0 4999999999999999999999999999999999999999999
Q ss_pred CCCCCC--CCCCCCCCCCCCCC-CccChHHHHHHHH
Q psy15158 640 TYNKTD--VAAPFGGFKQSGFG-KDLDINKAMYFVD 672 (709)
Q Consensus 640 ~~~~~~--~~~PFGG~k~SG~G-~~~G~~~~~~ftr 672 (709)
+..... ..+||||+|.||+| +++|.+.+.+|++
T Consensus 462 ~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~ 497 (500)
T TIGR01238 462 RNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQ 497 (500)
T ss_pred CCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHh
Confidence 876543 34799999999999 7999999998887
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-78 Score=684.32 Aligned_cols=419 Identities=30% Similarity=0.453 Sum_probs=379.4
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
+||+|+|+.+ ++++++++||+||++|++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|+
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela 78 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP-AWARLSLEERIAVVQRFAALLEERKEALA 78 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4799999875 467899999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||..++.. |+..+++.++|++....+..+...+. .+. ...++.++|+|||++|+|||||+.+.++++
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~---~~~-~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i 153 (484)
T TIGR03240 79 RVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENP---MPD-GRAVLRHRPHGVVAVFGPYNFPGHLPNGHI 153 (484)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccC---CCC-ceeEEEEecccEEEEECCCchHHHHHHHHH
Confidence 9999999999999884 99999999999998877765543211 122 346788999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~ 492 (709)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.++++.|+.||+++.|+||||+++|+.|++.+++
T Consensus 154 ~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~ 232 (484)
T TIGR03240 154 VPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232 (484)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 46789999999999999999999999999998876
Q ss_pred cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccH-HHHHHHHHHHHHhh---------
Q psy15158 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY-DAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 493 ~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~-d~fl~~L~~~~~~l--------- 562 (709)
+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++ |+|+++|++.++++
T Consensus 233 ~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~ 312 (484)
T TIGR03240 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEP 312 (484)
T ss_pred cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCC
Confidence 55788999999999999999999999999999999999999999999999999985 99999999988865
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC--------------------------------CHHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------DVDAVIK 603 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------dldeaI~ 603 (709)
++.++.+++.+++++++++|+++++||...+..+ |++|||+
T Consensus 313 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 392 (484)
T TIGR03240 313 QPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIA 392 (484)
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 5678999999999999999999998775322111 8999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++|||+|.++++++++++++|+||||+..... ..+||||+|.||+|++.|.. ..+|++ .|+++++
T Consensus 393 ~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~-~~~~~~---~~~~~~~ 468 (484)
T TIGR03240 393 IANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYY-AADYCA---YPVASLE 468 (484)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchH-HHhhee---eeEEEEe
Confidence 999999999999999999999999999999999999876554 46899999999999998844 444665 6889888
Q ss_pred c
Q psy15158 683 T 683 (709)
Q Consensus 683 ~ 683 (709)
.
T Consensus 469 ~ 469 (484)
T TIGR03240 469 A 469 (484)
T ss_pred c
Confidence 5
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-78 Score=683.42 Aligned_cols=422 Identities=39% Similarity=0.697 Sum_probs=389.0
Q ss_pred ceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~-~w~~~~~~~R~~~l~~~a~~l~~~~~el 79 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP-EWRKVPAPRRAEYLFRAAELLKKRKEEL 79 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 37999999765678899999999 579999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++.. |+..+++.++|++..++++.+...+.. .+ +...+.+++|+|||++|+|||||+.+.+++
T Consensus 80 a~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 155 (478)
T cd07131 80 ARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSE--LP-NKDAMTRRQPIGVVALITPWNFPVAIPSWK 155 (478)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccC--CC-CceEEEEeeceeEEEEECCcCcHHHHHHHH
Confidence 99999999999999885 999999999999999888766544321 11 234678999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 156 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 235 (478)
T cd07131 156 IFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA 235 (478)
T ss_pred HHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987779999999999999999999999999999988
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------- 562 (709)
+ +++|+++|+|||||+||++|||++.|++.+++++|+++||.|++++|||||++++|+|+++|+++++++
T Consensus 236 ~-~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 314 (478)
T cd07131 236 R-PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEE 314 (478)
T ss_pred h-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5 889999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC----CC---------------------------------CHH
Q psy15158 563 ------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR----PG---------------------------------DVD 599 (709)
Q Consensus 563 ------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dld 599 (709)
+++.+.+++.+++++++.+|+++++||...+. .| |+|
T Consensus 315 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ 394 (478)
T cd07131 315 TDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLE 394 (478)
T ss_pred CcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHH
Confidence 58889999999999999999999999864211 11 899
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCC-CccChHHHHHHHHHhcee
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFG-KDLDINKAMYFVDKIDSG 677 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G-~~~G~~~~~~ftr~~~~k 677 (709)
|||+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|.||+| +++|.+++..|++ .|
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~---~k 471 (478)
T cd07131 395 EAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTE---WK 471 (478)
T ss_pred HHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhh---eE
Confidence 999999999999999999999999999999999999999987664 357899999999999 8889999999999 68
Q ss_pred EEEEec
Q psy15158 678 TVFINT 683 (709)
Q Consensus 678 tV~iN~ 683 (709)
+|+++.
T Consensus 472 ~i~~~~ 477 (478)
T cd07131 472 AVYVDY 477 (478)
T ss_pred EEEEeC
Confidence 888763
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-78 Score=681.37 Aligned_cols=420 Identities=27% Similarity=0.456 Sum_probs=385.3
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||||+|+.+.+++.++++||+||++|++++.++.+++++|+++|++||+ .|+++|.++|+++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL-TWGQTSLAQRTSVLLRYQALLKEHRDEI 80 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999998766677899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++.. |+..+++.++|++..+..+.++..+.. . .+...+.+++|+|||++|+|||||+.+.+++
T Consensus 81 ~~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~g~~~~~~--~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 156 (477)
T TIGR01722 81 AELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQV--A-TRVDVYSIRQPLGVCAGITPFNFPAMIPLWM 156 (477)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC--C-CCceEEEEEcccceEEEEccCChHHHHHHHH
Confidence 99999999999999984 999999999999998887776543321 1 2234577899999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
+++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ .+.++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 157 ~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~-~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~ 235 (477)
T TIGR01722 157 FPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGD-KEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235 (477)
T ss_pred HHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCC-HHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 567899999999999999999999999999887
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------- 562 (709)
. ++||+++|+|||||+||++|||++.|++.++.++|.|+||.|++++|||||+++ |+|+++|+++++++
T Consensus 236 ~-~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~ 313 (477)
T TIGR01722 236 A-HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPG 313 (477)
T ss_pred h-cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 5 889999999999999999999999999999999999999999999999999999 99999999999876
Q ss_pred ------hcHHHHHHHHHHHHHHHhcCCEEEECCccC--C--CCC---------------------------------CHH
Q psy15158 563 ------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL--D--RPG---------------------------------DVD 599 (709)
Q Consensus 563 ------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~--~--~~g---------------------------------dld 599 (709)
+++.+.+++.+++++++++|+++++||... + ..| |++
T Consensus 314 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ 393 (477)
T TIGR01722 314 AEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLE 393 (477)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHH
Confidence 678999999999999999999999998642 1 011 899
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCC--CccChHHHHHHHHHhce
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFG--KDLDINKAMYFVDKIDS 676 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G--~~~G~~~~~~ftr~~~~ 676 (709)
|||+++|+++|||+++|||+|.++++++++++++|+||||+....+ ..+||||+|.||+| +++|.+++++|++ .
T Consensus 394 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~---~ 470 (477)
T TIGR01722 394 EAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTR---G 470 (477)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcC---e
Confidence 9999999999999999999999999999999999999999865544 46899999999999 4789999999988 6
Q ss_pred eEEEEe
Q psy15158 677 GTVFIN 682 (709)
Q Consensus 677 ktV~iN 682 (709)
|+++++
T Consensus 471 k~i~~~ 476 (477)
T TIGR01722 471 KTVTTR 476 (477)
T ss_pred eEEEEe
Confidence 888765
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-78 Score=681.36 Aligned_cols=419 Identities=35% Similarity=0.625 Sum_probs=383.0
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
+||||+|+.+.++++++++||+||++|++++.++.+++++|+++|++||+ +.|+++|.++|.++|++++++|++|+++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 37999998765567899999999999999999999999999999999997 23999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||..++...|+..+++.++||+..+++..+..... .+.+...+.+++|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 157 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRP---GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALK 157 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---CCCCceEEEEEEeccEEEEEcCCchHHHHHHHH
Confidence 99999999999987765689999999999999987765432211 112345678999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.||+++.|.||||+.+|+.|++.++
T Consensus 158 i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~ 236 (471)
T cd07139 158 IAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG 236 (471)
T ss_pred HHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 4578999999999999999999999999999988
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------- 562 (709)
+ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++
T Consensus 237 ~-~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (471)
T cd07139 237 E-RLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPA 315 (471)
T ss_pred h-cCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 5 789999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC--CC---------------------------------CHHHH
Q psy15158 563 ------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--PG---------------------------------DVDAV 601 (709)
Q Consensus 563 ------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--~g---------------------------------dldea 601 (709)
+++.+.+++.+++++++.+|+++++||..... .+ |+|||
T Consensus 316 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 395 (471)
T cd07139 316 TQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDA 395 (471)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHH
Confidence 57788999999999999999999999864221 11 89999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
|+++|+++|||+++|||+|.+++.++++++++|+|+||+.. .++.+||||+|.||+|+++|.+++..|++ .|+++
T Consensus 396 i~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~---~k~i~ 470 (471)
T cd07139 396 VRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLE---TKSIY 470 (471)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhc---eeEEe
Confidence 99999999999999999999999999999999999999876 56678999999999999999999999998 56664
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=735.26 Aligned_cols=481 Identities=26% Similarity=0.397 Sum_probs=417.6
Q ss_pred cCCCcchhHHHHHH-------HHhhcCceeccccccccc---hhhhhHHhHhhccCCCCCcchhhHHHHHHhhccccc-C
Q psy15158 180 SGAGSMDVVRLIEE-------IKENLQITLQNEDVLMSS---VFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDV-S 248 (709)
Q Consensus 180 ~~~~~~~~~~~~~~-------~~~~~~~~~~ne~v~~~~---~f~~f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~-~ 248 (709)
-||+|..|.|++++ +.+.+. .++-..-..|+ .=.|.+.+.|+|++|.|+.++...+.+..++..... .
T Consensus 474 N~an~sfv~~~~d~~~~~~~l~~~p~~-~~~~~~~~~~~~~~~p~~~~~~~r~n~~~~~~~~~~~~~~l~~al~~~~~~~ 552 (1208)
T PRK11905 474 NGANSSFVNRIVDENVPVEELIADPVE-KVAAMGVAPHPQIPLPRDLYGPERRNSKGLDLSDEATLAALDEALNAFAAKT 552 (1208)
T ss_pred ccchHHHHHHhhcCCCCHHHHHHCHHH-HHhhccccCCCCCCCchhhcCCCCCCCCCccCCCHHHHHHHHHHHHHHHccC
Confidence 57888888888853 233322 11100001111 112334566999999999999988888877765433 4
Q ss_pred CCccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 249 FPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 249 ~~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
|...++|+|+... +..++++||+| +++|++++.++.+++++|+++|++||+ .|+.+|.++|+++|++++++|+++
T Consensus 553 ~~~~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~-~W~~~~~~~Ra~iL~raAdll~~~ 628 (1208)
T PRK11905 553 WHAAPLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP-EWSATPAAERAAILERAADLMEAH 628 (1208)
T ss_pred eeecceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 6667888886542 45789999999 889999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+++|+.++++|+||++.++.. |+.+++++|+||+.++++..+ ...++|+|||++|+|||||+++
T Consensus 629 ~~eL~~l~~~E~GKt~~ea~~-Ev~eaid~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai 692 (1208)
T PRK11905 629 MPELFALAVREAGKTLANAIA-EVREAVDFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAI 692 (1208)
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHH
Confidence 999999999999999999985 999999999999998766432 1346799999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
+++++++||++||+||+|||++||+++..++++|++||+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|+
T Consensus 693 ~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~ 772 (1208)
T PRK11905 693 FTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQ 772 (1208)
T ss_pred HHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHhc--CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---
Q psy15158 488 KSAAES--NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 488 ~~aa~~--~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--- 562 (709)
+.++.+ +.+|+++|+|||||+||++|||+|+|++.+++|+|.++||+|+|++|||||++++|+|+++|+++++++
T Consensus 773 ~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vG 852 (1208)
T PRK11905 773 RTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIG 852 (1208)
T ss_pred HHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCC
Confidence 998863 358999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-CCC---------------------------------
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-RPG--------------------------------- 596 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~~g--------------------------------- 596 (709)
+++.+.+++.++|+.+..+|+.++.|+.... ..|
T Consensus 853 dP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~ 932 (1208)
T PRK11905 853 DPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKAD 932 (1208)
T ss_pred CchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCC
Confidence 6888999999999999999988877652210 001
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCC--CCCCCCCCCCCCCC-ccChHHHHHHHHH
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDV--AAPFGGFKQSGFGK-DLDINKAMYFVDK 673 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~--~~PFGG~k~SG~G~-~~G~~~~~~ftr~ 673 (709)
+++|+|+++|+++||||++|||+|.+.+.++++++++|+||||++.++++ .+||||+|.||+|+ .+|++++.+|++
T Consensus 933 dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~- 1011 (1208)
T PRK11905 933 ELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVR- 1011 (1208)
T ss_pred CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhh-
Confidence 69999999999999999999999999999999999999999999988875 47999999999996 566777777777
Q ss_pred hceeEEEEecc
Q psy15158 674 IDSGTVFINTY 684 (709)
Q Consensus 674 ~~~ktV~iN~~ 684 (709)
.+++++|..
T Consensus 1012 --~k~v~~~~~ 1020 (1208)
T PRK11905 1012 --EAPTPIPPA 1020 (1208)
T ss_pred --cceeecccc
Confidence 688887753
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=679.89 Aligned_cols=397 Identities=37% Similarity=0.628 Sum_probs=371.5
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||+++++++.++.++++.++++|++||+ .|+.+|.++|.++|++++++|++++++|+.++++|+|||+.++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 78 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK-TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG- 78 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 469999999999999999999999999999998 999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.++|++..++++.+...+.. . .+...+..++|+|||++|+|||||+.+.+++++|||++||+||+|||+.
T Consensus 79 ev~~~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 155 (448)
T TIGR01780 79 EILYAASFLEWFAEEAKRVYGDTIPSP--Q-SDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQ 155 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCC--C-CCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCcc
Confidence 999999999999998888776544322 1 2234567889999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCC-chhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGT-GAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~-g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~ 508 (709)
+|+++..+++++.++|+|+|++|+++|+ +.++++.|+.||++++|.||||+.+|+.|++.++. +++|+++|+|||||+
T Consensus 156 ~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~ 234 (448)
T TIGR01780 156 TPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPF 234 (448)
T ss_pred chHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCee
Confidence 9999999999999999999999999997 67889999999999999999999999999999885 789999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHH
Q psy15158 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLID 573 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~ 573 (709)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ +++.+.+++.+
T Consensus 235 iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~ 314 (448)
T TIGR01780 235 IVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEK 314 (448)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887 68899999999
Q ss_pred HHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccc
Q psy15158 574 YCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620 (709)
Q Consensus 574 ~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d 620 (709)
++++++++|+++++||...+..| |++|+|+++|+++|||+++|||+|
T Consensus 315 ~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d 394 (448)
T TIGR01780 315 HIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRD 394 (448)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCC
Confidence 99999999999999996432112 899999999999999999999999
Q ss_pred hHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHH
Q psy15158 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVD 672 (709)
Q Consensus 621 ~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr 672 (709)
.++++++++++++|+||||+....++.+||||+|+||+|+++|.+++..|++
T Consensus 395 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~ 446 (448)
T TIGR01780 395 LATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLE 446 (448)
T ss_pred HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhc
Confidence 9999999999999999999987777788999999999999999999999987
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-78 Score=680.18 Aligned_cols=405 Identities=36% Similarity=0.654 Sum_probs=377.3
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.+.||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|++++++
T Consensus 22 ~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (480)
T cd07111 22 FGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE-SWSALPGHVRARHLYRIARHIQKHQRL 100 (480)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4589999999865567899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.+++++.+++...+ .+..++|+|||++|+|||||+.+.++
T Consensus 101 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~--------------~~~~~~P~GVV~~I~PwN~P~~~~~~ 166 (480)
T cd07111 101 FAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT--------------ELAGWKPVGVVGQIVPWNFPLLMLAW 166 (480)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcccceecceEEEECCCccHHHHHHH
Confidence 9999999999999998755899999999999888765421 12457899999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +++..|+.||+++.|+||||+.+|+.|.+.+
T Consensus 167 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~a 245 (480)
T cd07111 167 KICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRAT 245 (480)
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999865 6899999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 246 a~-~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 324 (480)
T cd07111 246 AG-TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDK 324 (480)
T ss_pred hc-cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 85 799999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
+++.+++++.+++++++.+|+++++||...+..| |+||||
T Consensus 325 ~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai 404 (480)
T cd07111 325 AIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAV 404 (480)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHH
Confidence 6888999999999999999999999875321111 999999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHH
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVD 672 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr 672 (709)
+++|+++|||+++|||+|.+++.++++++++|+|+||+.......+||||+|.||+|+++|.+++++|++
T Consensus 405 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 474 (480)
T cd07111 405 ALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474 (480)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhh
Confidence 9999999999999999999999999999999999999987767778999999999999999999999988
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-77 Score=681.61 Aligned_cols=420 Identities=29% Similarity=0.493 Sum_probs=382.6
Q ss_pred ccceecCeEeeCCCCCeeeeecCC-CCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPA-NESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~-tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.+.+|+|+|+.+ +..++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|.++|+++|++++++|+++++
T Consensus 19 ~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (500)
T cd07083 19 YPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK-TWKDWPQEDRARLLLKAADLLRRRRR 95 (500)
T ss_pred ccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhCHH
Confidence 447999999874 4578999998 6999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++.. |+..+++.++||+.++.+..+....... ..+...+++++|+|||++|+|||||+.+.+
T Consensus 96 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 172 (500)
T cd07083 96 ELIATLTYEVGKNWVEAID-DVAEAIDFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPVAIFT 172 (500)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHHHHHH
Confidence 9999999999999999875 9999999999999999887665321111 123456788999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.+.
T Consensus 173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 173 GMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhcCC------CcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-
Q psy15158 490 AAESNL------KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM- 562 (709)
Q Consensus 490 aa~~~~------k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l- 562 (709)
+++ ++ +|+++|+|||||+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++
T Consensus 253 aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 331 (500)
T cd07083 253 AAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLS 331 (500)
T ss_pred Hhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCC
Confidence 886 44 9999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC--------------------------------
Q psy15158 563 --------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG-------------------------------- 596 (709)
Q Consensus 563 --------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g-------------------------------- 596 (709)
+++.+.+++.+++++++.+| ++++||...+..|
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 410 (500)
T cd07083 332 VGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRY 410 (500)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEe
Confidence 67889999999999999887 9999986432111
Q ss_pred ---CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCC-CccChHHHHHH
Q psy15158 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFG-KDLDINKAMYF 670 (709)
Q Consensus 597 ---dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~~G~~~~~~f 670 (709)
|++|||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ..+||||+|.||+| +++|.+++.+|
T Consensus 411 ~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~ 490 (500)
T cd07083 411 KDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRF 490 (500)
T ss_pred CCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHh
Confidence 6899999999999999999999999999999999999999999986655 35799999999999 57788888888
Q ss_pred HHHhceeEEEE
Q psy15158 671 VDKIDSGTVFI 681 (709)
Q Consensus 671 tr~~~~ktV~i 681 (709)
++ .|+++.
T Consensus 491 ~~---~k~~~~ 498 (500)
T cd07083 491 LE---MKAVAE 498 (500)
T ss_pred hh---eeEEEE
Confidence 88 577754
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-77 Score=672.82 Aligned_cols=418 Identities=31% Similarity=0.473 Sum_probs=376.5
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
.++|||+|+.+ +..++++||+|++++++++.++.+|+++|+++|++|+. .++..+|+++|++++++|++++++|
T Consensus 5 ~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~----~~~~~~R~~~l~~~a~~l~~~~~el 78 (472)
T TIGR03250 5 ALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP----TLTRYERSAILDRAAALLAARKEEI 78 (472)
T ss_pred CceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh----hCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 37899999853 56899999999999999999999999999999987764 6899999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccC-CCCCCCceeeeeccc-CEEEEECCCCchHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAH-ARPNSNFTFTKREPI-GVCGLITPWNYPLMMLS 409 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~-~~~~~~~~~~~~~P~-GVv~~I~PwNfPl~~~~ 409 (709)
++++++|+|||+.++.. |+..+++.++||+..+.+..+...+... ....+...++.++|+ |||++|+|||||+.+.+
T Consensus 79 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~ 157 (472)
T TIGR03250 79 SDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVA 157 (472)
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHH
Confidence 99999999999999985 9999999999999998877665432111 001123467899997 99999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||+++.|.||||+.+|+.|++.
T Consensus 158 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 237 (472)
T TIGR03250 158 HKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAAR 237 (472)
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999997
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 238 a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 314 (472)
T TIGR03250 238 AG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMD 314 (472)
T ss_pred hc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCC
Confidence 64 68999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIKR 604 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~ 604 (709)
+++.+.+++.+++++++.+|+++++||.... .+ | |++|||++
T Consensus 315 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (472)
T TIGR03250 315 PSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRI 394 (472)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 6788999999999999999999999985210 00 1 89999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCC-ccChHHHHHHHHHhceeEEEEe
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGK-DLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~-~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+|+++|||+++|||+|.+++.++++++++|+||||+..... ..+||||+|.||+|+ .+|.+++..|++ .|+++++
T Consensus 395 aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~---~k~i~~~ 471 (472)
T TIGR03250 395 SNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTN---LKTYSLP 471 (472)
T ss_pred HhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhc---eEEEEEe
Confidence 99999999999999999999999999999999999876544 358999999999994 556788888988 6888765
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-77 Score=676.24 Aligned_cols=423 Identities=30% Similarity=0.472 Sum_probs=383.4
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||+|+|+.+.+++.++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|+++|++++++|++|+++|
T Consensus 17 ~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~-~W~~~~~~~R~~iL~~~a~~l~~~~~el 95 (496)
T PLN00412 17 KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK-AWAKTPLWKRAELLHKAAAILKEHKAPI 95 (496)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 479999999766667899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCc--cccccC-CC-CCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS--TIPIAH-AR-PNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~--~~p~~~-~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
++++++|+|||..++.. |+..+++.++|++..+.+..++ ..+... +. ..+...+.+++|+|||++|+|||||+.+
T Consensus 96 ~~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 174 (496)
T PLN00412 96 AECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNL 174 (496)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHH
Confidence 99999999999999984 9999999999999887766432 221100 00 1122457889999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|.|||| ++|+.|+
T Consensus 175 ~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~ 253 (496)
T PLN00412 175 AVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAIS 253 (496)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999987789999999999999999999 9999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 254 ~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 254 KKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence 8864 78999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIK 603 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~ 603 (709)
++..+.+++.+++++++.+|+++++||.... .+ | |+||||+
T Consensus 331 ~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~ 410 (496)
T PLN00412 331 EDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 410 (496)
T ss_pred cccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHH
Confidence 5778899999999999999999998764200 00 1 8999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++|||+|.+++.++++++++|+|+||+..... ..+||||+|.||+|+++|.+++..|++ .|+++++
T Consensus 411 ~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~---~k~i~~~ 487 (496)
T PLN00412 411 HCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTK---VKSTVIN 487 (496)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcc---eEEEEEe
Confidence 999999999999999999999999999999999999876433 468999999999999999999999988 6888877
Q ss_pred c
Q psy15158 683 T 683 (709)
Q Consensus 683 ~ 683 (709)
.
T Consensus 488 ~ 488 (496)
T PLN00412 488 L 488 (496)
T ss_pred c
Confidence 5
|
|
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-77 Score=671.36 Aligned_cols=402 Identities=43% Similarity=0.714 Sum_probs=373.2
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
+||+|++++++++.++.+|+++|+++|++||+ +.|+++|.++|.++|++++++|++|+++|++++++|+|||+.++..
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARG- 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 59999999999999999999999999999997 2499999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.++|++.+++++.+...+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~ 157 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNL---GDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEF 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccC---CCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 999999999999998877766543321 11234678899999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++. +++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~i 236 (454)
T cd07118 158 TSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQI 236 (454)
T ss_pred CcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceE
Confidence 999999999999999999999999999877899999999999999999999999999999885 8899999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDY 574 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~ 574 (709)
|++|||++.|++.+++++|+++||.|++++|||||++++|+|+++|+++++++ +++.+.+++.++
T Consensus 237 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~ 316 (454)
T cd07118 237 VFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDY 316 (454)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 578899999999
Q ss_pred HHHHHhcCCEEEECCccCC-CCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccc
Q psy15158 575 CEKAKSEGARLLIGGKRLD-RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~-~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d 620 (709)
+++++.+|+++++||...+ ..| |++|||+++|+++|||+++|||+|
T Consensus 317 i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d 396 (454)
T cd07118 317 VDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKD 396 (454)
T ss_pred HHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCC
Confidence 9999999999999986532 111 999999999999999999999999
Q ss_pred hHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 621 ~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
.++++++++++++|+|+||+...+++.+||||+|+||+|+++|.+++..|++ .|+++
T Consensus 397 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~---~k~~~ 453 (454)
T cd07118 397 IDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTE---LKTVH 453 (454)
T ss_pred HHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhc---eeEEe
Confidence 9999999999999999999988878889999999999999999999999988 46654
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-77 Score=671.85 Aligned_cols=401 Identities=40% Similarity=0.712 Sum_probs=371.7
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||+..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP-RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW- 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 479999999999999999999999999999998 999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHhhhC---ccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILG---STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g---~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKP 426 (709)
|+..+++.++||+..++++.. ...+.. . .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 79 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 155 (456)
T cd07110 79 DVDDVAGCFEYYADLAEQLDAKAERAVPLP--S-EDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKP 155 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCccccCC--C-CCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 999999999999999887743 112211 1 2345678999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc
Q psy15158 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506 (709)
Q Consensus 427 s~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn 506 (709)
|+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 156 s~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~ 234 (456)
T cd07110 156 SELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKS 234 (456)
T ss_pred cccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCC
Confidence 999999999999999999999999999999878899999999999999999999999999999885 8899999999999
Q ss_pred cEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHH
Q psy15158 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKL 571 (709)
Q Consensus 507 p~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i 571 (709)
|+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ +++.+.+++
T Consensus 235 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~ 314 (456)
T cd07110 235 PIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKV 314 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876 588999999
Q ss_pred HHHHHHHHhcCCEEEECCccCC--CCC---------------------------------CHHHHHHHHhcCCCCCeEEE
Q psy15158 572 IDYCEKAKSEGARLLIGGKRLD--RPG---------------------------------DVDAVIKRANSTEYGLASGI 616 (709)
Q Consensus 572 ~~~i~~a~~~Ga~vl~GG~~~~--~~g---------------------------------dldeaI~~~N~t~yGLta~V 616 (709)
.+++++++.+|+++++||.... ..+ |+||||+++|+++|||+++|
T Consensus 315 ~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v 394 (456)
T cd07110 315 LSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAV 394 (456)
T ss_pred HHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEE
Confidence 9999999999999999986431 111 89999999999999999999
Q ss_pred EccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 617 ~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
||+|.+++.++++++++|+|+||+.+...+.+||||+|+||+|+++|.+++..|++ .|++
T Consensus 395 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~---~k~i 454 (456)
T cd07110 395 ISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLE---VKQI 454 (456)
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcc---eeEE
Confidence 99999999999999999999999877666678999999999999999999999988 4555
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-77 Score=670.11 Aligned_cols=401 Identities=31% Similarity=0.567 Sum_probs=371.6
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~ 348 (709)
++||+||+++++++.++.+|+++|++.|++||+ +.|+. +.++|+++|++++++|++|+++|++++++|+|||+.++..
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 469999999999999999999999999999997 23998 9999999999999999999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~ 428 (709)
|+..+++.++||+..+++..+...+.. .+...++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+
T Consensus 80 -Ev~~~i~~l~~~~~~~~~~~g~~~~~~----~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 154 (455)
T cd07120 80 -EISGAISELRYYAGLARTEAGRMIEPE----PGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccC----CCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCC
Confidence 999999999999999888766543321 224568899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHH-cCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc
Q psy15158 429 VSPLTALKLAELSVR-AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507 (709)
Q Consensus 429 ~tplta~~l~ell~e-AGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp 507 (709)
.+|+++..+++++.+ +|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|++.++. +++|+++|+|||||
T Consensus 155 ~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~ 233 (455)
T cd07120 155 QTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTP 233 (455)
T ss_pred CChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCe
Confidence 999999999999999 7999999999999878899999999999999999999999999999885 78999999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ +++.+.+++.
T Consensus 234 ~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~ 313 (455)
T cd07120 234 CIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVD 313 (455)
T ss_pred eEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 5789999999
Q ss_pred HHHHHHHhcCCEEEECCccCCC---CC---------------------------------CHHHHHHHHhcCCCCCeEEE
Q psy15158 573 DYCEKAKSEGARLLIGGKRLDR---PG---------------------------------DVDAVIKRANSTEYGLASGI 616 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~~~---~g---------------------------------dldeaI~~~N~t~yGLta~V 616 (709)
+++++++++|+++++||...+. .| |+||||+++|+++|||+++|
T Consensus 314 ~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~i 393 (455)
T cd07120 314 RMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASV 393 (455)
T ss_pred HHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEE
Confidence 9999999999999997743111 11 89999999999999999999
Q ss_pred EccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 617 ~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+|.+++++++.++++|+||||++......+||||+|+||+|+++|.++++.|++ .|+++
T Consensus 394 ft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~---~k~v~ 454 (455)
T cd07120 394 WTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIE---YKHIY 454 (455)
T ss_pred EcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhc---eeEEe
Confidence 99999999999999999999999987766778999999999999999999999988 57765
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-77 Score=676.33 Aligned_cols=415 Identities=20% Similarity=0.261 Sum_probs=367.0
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHh-chhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKA-FEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A-~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
++||||+|+.+. +++++++||+||+++++++.++ +|+++|+++|++| |+ .|+++|+++|+++|++++++|++|+++
T Consensus 2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~-~W~~~~~~~Ra~~L~~~a~~l~~~~~~ 78 (513)
T cd07128 2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP-ALRALTFHERAAMLKALAKYLMERKED 78 (513)
T ss_pred ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc-hhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999763 5789999999999999999876 8999999999997 77 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhC--------ccccccCCCCCCCceeeeecc-cCEEEEECCC
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG--------STIPIAHARPNSNFTFTKREP-IGVCGLITPW 401 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g--------~~~p~~~~~~~~~~~~~~~~P-~GVv~~I~Pw 401 (709)
|+++ ++|+|||+.++.. |+..+++.++||++++++..+ +..+.. .+.....++.++| +|||++|+||
T Consensus 79 la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~pw 154 (513)
T cd07128 79 LYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS--KDGTFVGQHILTPRRGVAVHINAF 154 (513)
T ss_pred HHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccC--CCccccceEEEEecccEEEEECCc
Confidence 9996 8999999999985 999999999999999887653 212211 1111134677999 5999999999
Q ss_pred CchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcC-CCCCcEEEecCCchhHHHHHHhCCCccEEEEcCCh
Q psy15158 402 NYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480 (709)
Q Consensus 402 NfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAG-lP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt 480 (709)
|||+.+.+++++|||++||+||+|||+.+|+++.++++++.++| +|+|++|+|+|++.++++.| +++++|+||||+
T Consensus 155 N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~ 231 (513)
T cd07128 155 NFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSA 231 (513)
T ss_pred ccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999998654444432 578999999999
Q ss_pred HHHHHHHHHHH-hcCCCcEEEcCCCcccEEEcCCCC-----HHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHH
Q psy15158 481 VTGMKIMKSAA-ESNLKKVSLELGGKSPLVIFDDYN-----LDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEK 554 (709)
Q Consensus 481 ~~g~~I~~~aa-~~~~k~v~lElGGknp~IV~~dAD-----le~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~ 554 (709)
++|+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++
T Consensus 232 ~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~ 311 (513)
T cd07128 232 ATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEA 311 (513)
T ss_pred HHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHH
Confidence 99999999863 347899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-------CCC----------------
Q psy15158 555 VVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-------RPG---------------- 596 (709)
Q Consensus 555 L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-------~~g---------------- 596 (709)
|+++++++ +++.+++++.++|++++++ +++++||.... ..|
T Consensus 312 l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 390 (513)
T cd07128 312 LKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAA 390 (513)
T ss_pred HHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCccc
Confidence 99999987 6889999999999999988 89999985410 011
Q ss_pred -------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcC--eeeEEEcCCCC---------CCC
Q psy15158 597 -------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKID--SGTVFINTYNK---------TDV 646 (709)
Q Consensus 597 -------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~--aG~V~VN~~~~---------~~~ 646 (709)
|+||+|+++|+++|||+++|||+|.+++++++++++ +|+||||+... ..+
T Consensus 391 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~ 470 (513)
T cd07128 391 TAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLP 470 (513)
T ss_pred chHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCC
Confidence 899999999999999999999999999999999997 99999998642 134
Q ss_pred CCCCCCCCCCCCCCcc-ChHHHHHHHHHhceeEEE
Q psy15158 647 AAPFGGFKQSGFGKDL-DINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 647 ~~PFGG~k~SG~G~~~-G~~~~~~ftr~~~~ktV~ 680 (709)
.+||||+|.||+|++. |.+++..|++ .|++.
T Consensus 471 ~~pfGG~k~SG~G~~~gg~~~l~~~~~---~k~v~ 502 (513)
T cd07128 471 QLVHGGPGRAGGGEELGGLRGVKHYMQ---RTAVQ 502 (513)
T ss_pred CCCCCCcccCCCCcccccHHHHHHhhe---eeeee
Confidence 6899999999999996 5888888888 45653
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-77 Score=670.72 Aligned_cols=402 Identities=39% Similarity=0.670 Sum_probs=373.8
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.++..
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~- 78 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP-EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLG- 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-
Confidence 479999999999999999999999999999998 999999999999999999999999999999999999999999874
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.++|++..+..+.+...+.. .+...+..++|+|||++|+|||||+.+.+++++|||++||+||+|||+.
T Consensus 79 ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~ 154 (456)
T cd07107 79 DVMVAAALLDYFAGLVTELKGETIPVG----GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQ 154 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccCC----CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCC
Confidence 999999999999998877776654432 2345678999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|++.+++ +++|+++|+|||||+|
T Consensus 155 ~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~i 232 (456)
T cd07107 155 APLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALI 232 (456)
T ss_pred ChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEE
Confidence 999999999999995 99999999999877789999999999999999999999999999875 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHhhh-hccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGV-FFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLID 573 (709)
Q Consensus 510 V~~dADle~Aa~~iv~sa-f~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~ 573 (709)
|++|||++.|++.+++++ |.++||.|+|++|||||++++|+|+++|+++++++ ++..+.+++.+
T Consensus 233 V~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~ 312 (456)
T cd07107 233 VFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMH 312 (456)
T ss_pred ECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHH
Confidence 999999999999999995 99999999999999999999999999999999876 57889999999
Q ss_pred HHHHHHhcCCEEEECCccCCC----CC---------------------------------CHHHHHHHHhcCCCCCeEEE
Q psy15158 574 YCEKAKSEGARLLIGGKRLDR----PG---------------------------------DVDAVIKRANSTEYGLASGI 616 (709)
Q Consensus 574 ~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dldeaI~~~N~t~yGLta~V 616 (709)
+|++++.+|+++++||..... .| |+||||+++|+++|||+++|
T Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~v 392 (456)
T cd07107 313 YIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAI 392 (456)
T ss_pred HHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEE
Confidence 999999999999999854210 11 89999999999999999999
Q ss_pred EccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 617 ~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
||+|.+++.++++++++|+|+||+.....+..||||+|.||+|+++|.++++.|++ .|+++++
T Consensus 393 ft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~---~k~v~~~ 455 (456)
T cd07107 393 WTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQ---EKNVNVR 455 (456)
T ss_pred ECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhc---eEEEEEe
Confidence 99999999999999999999999987766788999999999999999999999988 6888765
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-77 Score=670.91 Aligned_cols=407 Identities=37% Similarity=0.622 Sum_probs=374.1
Q ss_pred eeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH
Q psy15158 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347 (709)
Q Consensus 268 ~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~ 347 (709)
++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+|||..++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 79 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD-VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR 79 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH
Confidence 35789999999999999999999999999999998 99999999999999999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhCccccccCCC-CCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeC
Q psy15158 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHAR-PNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426 (709)
Q Consensus 348 ~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKP 426 (709)
. |+..+++.++||+.++..+.++..+..... ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 80 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 158 (456)
T cd07145 80 V-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKP 158 (456)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 999999999999998877766543322100 01234678899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc
Q psy15158 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506 (709)
Q Consensus 427 s~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn 506 (709)
|+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~n 237 (456)
T cd07145 159 SSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGSD 237 (456)
T ss_pred CccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCC
Confidence 999999999999999999999999999999878899999999999999999999999999999885 7999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHH
Q psy15158 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKL 571 (709)
Q Consensus 507 p~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i 571 (709)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ +++.+.+++
T Consensus 238 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 317 (456)
T cd07145 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERM 317 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999875 588899999
Q ss_pred HHHHHHHHhcCCEEEECCccCC------------CCC-------------------CHHHHHHHHhcCCCCCeEEEEccc
Q psy15158 572 IDYCEKAKSEGARLLIGGKRLD------------RPG-------------------DVDAVIKRANSTEYGLASGIFTSD 620 (709)
Q Consensus 572 ~~~i~~a~~~Ga~vl~GG~~~~------------~~g-------------------dldeaI~~~N~t~yGLta~V~T~d 620 (709)
.+++++++.+|+++++||.... .+. |++|||+++|+++|||+++|||+|
T Consensus 318 ~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 397 (456)
T cd07145 318 ENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTND 397 (456)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999999999985321 000 899999999999999999999999
Q ss_pred hHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 621 INKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 621 ~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
.+++.++++++++|+||||+.+... ..+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 398 ~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~---~k~v~ 455 (456)
T cd07145 398 INRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTE---EKTIV 455 (456)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhc---eeEEe
Confidence 9999999999999999999876544 468999999999999999999999988 56664
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-76 Score=672.88 Aligned_cols=423 Identities=32% Similarity=0.490 Sum_probs=385.1
Q ss_pred CccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
...+||+|+|. .++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++
T Consensus 32 ~~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 108 (518)
T cd07125 32 EAIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA-GWSATPVEERAEILEKAADLLEANR 108 (518)
T ss_pred ccCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 34579999997 3467899999999 999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCcc-ccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST-IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~-~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
++|++++++|+|||+.++.. |+..+++.++|++..+++..+.. .+ .+.+...+.+++|+|||++|+|||||+..
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~P~GVV~~I~p~N~P~~~ 183 (518)
T cd07125 109 GELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELP----GPTGELNGLELHGRGVFVCISPWNFPLAI 183 (518)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccc----CCCCceeEEEEecccEEEEECCcchHHHH
Confidence 99999999999999999985 99999999999999988866543 22 22344568899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|+
T Consensus 184 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 263 (518)
T cd07125 184 FTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLIN 263 (518)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777999999999999999999999999999
Q ss_pred HHHHhc--CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---
Q psy15158 488 KSAAES--NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 488 ~~aa~~--~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--- 562 (709)
+.++++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 264 ~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 343 (518)
T cd07125 264 RALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVG 343 (518)
T ss_pred HHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCcc
Confidence 988753 378999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------C
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------D 597 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------d 597 (709)
+++.+.+++.+++++++.. +++++||......| |
T Consensus 344 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~~~~~~g~~~~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~ 422 (518)
T cd07125 344 DPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAED 422 (518)
T ss_pred CCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCCeEEccEEEeecCChHhhCcccCCeEEEEEeCCCC
Confidence 5788999999999999875 68998875321000 6
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCCC-ccChHHHHHHHHHh
Q psy15158 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFGK-DLDINKAMYFVDKI 674 (709)
Q Consensus 598 ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G~-~~G~~~~~~ftr~~ 674 (709)
+||||+++|+++|||+++|||+|.+++.++++++++|+||||+..... ..+||||+|.||+|+ ++|.+++..|++
T Consensus 423 ~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~-- 500 (518)
T cd07125 423 LDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGN-- 500 (518)
T ss_pred HHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcc--
Confidence 999999999999999999999999999999999999999999876644 468999999999995 677888888888
Q ss_pred ceeEEEEecc
Q psy15158 675 DSGTVFINTY 684 (709)
Q Consensus 675 ~~ktV~iN~~ 684 (709)
.|+++++..
T Consensus 501 -~k~i~~~~~ 509 (518)
T cd07125 501 -EKTVSLNTT 509 (518)
T ss_pred -eEEEEEEcc
Confidence 689888753
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-77 Score=668.43 Aligned_cols=406 Identities=36% Similarity=0.593 Sum_probs=374.2
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhccc-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWS-RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~-~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~ 348 (709)
++||+||+++++++.++.+|+++|+++|++||+ .|+ ++|..+|.++|++++++|++++++|++++++|+|||+.++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ 79 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD-TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARA 79 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Confidence 469999999999999999999999999999998 999 999999999999999999999999999999999999987765
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccc-cccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTI-PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~-p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs 427 (709)
.|+..+++.++||+..+++..++.. +.......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 80 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps 159 (459)
T cd07089 80 MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPA 159 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 6999999999999999888765542 211000013456899999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc
Q psy15158 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507 (709)
Q Consensus 428 ~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp 507 (709)
+.+|+++..+.+++.++|+|+|++|+++|++.+++..|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||
T Consensus 160 ~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n~ 238 (459)
T cd07089 160 PDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKSA 238 (459)
T ss_pred CCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCe
Confidence 99999999999999999999999999999888899999999999999999999999999999885 78999999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ ++..+.+++.
T Consensus 239 ~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~ 318 (459)
T cd07089 239 NIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVE 318 (459)
T ss_pred eEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 6788999999
Q ss_pred HHHHHHHhcCCEEEECCccCCC--CC---------------------------------CHHHHHHHHhcCCCCCeEEEE
Q psy15158 573 DYCEKAKSEGARLLIGGKRLDR--PG---------------------------------DVDAVIKRANSTEYGLASGIF 617 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~~~--~g---------------------------------dldeaI~~~N~t~yGLta~V~ 617 (709)
+++++++.+|+++++||..... .| |+||||+++|+++|||+++||
T Consensus 319 ~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 398 (459)
T cd07089 319 GYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVW 398 (459)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEE
Confidence 9999999999999999864221 11 899999999999999999999
Q ss_pred ccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 618 T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
|+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.+++..|++ .|+++
T Consensus 399 t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~---~k~v~ 458 (459)
T cd07089 399 SADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLE---TKSIA 458 (459)
T ss_pred cCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhc---eeEEe
Confidence 9999999999999999999999988777788999999999999999999999988 56664
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-77 Score=668.45 Aligned_cols=403 Identities=43% Similarity=0.774 Sum_probs=375.1
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||++.++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 78 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK-EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV- 78 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 479999999999999999999999999999998 999999999999999999999999999999999999999999875
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.++||+.+++++.++..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 79 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~ 154 (457)
T cd07090 79 DIDSSADCLEYYAGLAPTLSGEHVPLP----GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPF 154 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeccC----CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCc
Confidence 999999999999999888766544322 2345688999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..+.+++.++|+|+|++|+++|++ ++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 155 ~~~~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 232 (457)
T cd07090 155 TPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLI 232 (457)
T ss_pred CcHHHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceE
Confidence 99999999999999999999999999865 589999999999999999999999999999885 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDY 574 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~ 574 (709)
|++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ ++.++.+++.++
T Consensus 233 V~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 312 (457)
T cd07090 233 IFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGY 312 (457)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999886 578899999999
Q ss_pred HHHHHhcCCEEEECCccCC-----CCC---------------------------------CHHHHHHHHhcCCCCCeEEE
Q psy15158 575 CEKAKSEGARLLIGGKRLD-----RPG---------------------------------DVDAVIKRANSTEYGLASGI 616 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~-----~~g---------------------------------dldeaI~~~N~t~yGLta~V 616 (709)
|++++.+|+++++||.... ..| |+||||+++|+++|||+++|
T Consensus 313 i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i 392 (457)
T cd07090 313 IESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGV 392 (457)
T ss_pred HHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEE
Confidence 9999999999999986421 001 89999999999999999999
Q ss_pred EccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 617 ~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
||+|.+.++++++++++|+||||+....++.+||||+|.||+|+++|.+++++|++ .|+++++.
T Consensus 393 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~---~k~~~~~~ 456 (457)
T cd07090 393 FTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQ---LKTVYVEM 456 (457)
T ss_pred EcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhC---eEEEEEeC
Confidence 99999999999999999999999987777789999999999999999999999998 68887653
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-76 Score=666.03 Aligned_cols=401 Identities=39% Similarity=0.705 Sum_probs=372.1
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhccc-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWS-RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~-~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~ 348 (709)
++||+||+++++++.++.+|+++++++|++||+ .|. ++|.++|.++|++++++|++|+++|++++++|+|||+.++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~-~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 79 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE-SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARA 79 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH
Confidence 469999999999999999999999999999997 876 999999999999999999999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~ 428 (709)
|+..+++.++||+...+++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 80 -ev~~~~~~l~~~~~~~~~~~g~~~~~~----~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~ 154 (454)
T cd07109 80 -DVEAAARYFEYYGGAADKLHGETIPLG----PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAE 154 (454)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccC----CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999999888776544321 234578899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE
Q psy15158 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508 (709)
Q Consensus 429 ~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~ 508 (709)
.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||+++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+
T Consensus 155 ~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~ 233 (454)
T cd07109 155 DAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQ 233 (454)
T ss_pred CChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCce
Confidence 9999999999999999999999999999777899999999999999999999999999999874 799999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHH
Q psy15158 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDY 574 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~ 574 (709)
||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ +++++.+++.++
T Consensus 234 iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~ 313 (454)
T cd07109 234 IVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGF 313 (454)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876 578899999999
Q ss_pred HHHHHhcCCEEEECCccCC---CCC---------------------------------CHHHHHHHHhcCCCCCeEEEEc
Q psy15158 575 CEKAKSEGARLLIGGKRLD---RPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~---~~g---------------------------------dldeaI~~~N~t~yGLta~V~T 618 (709)
+++++.+|+++++||.... ..| |+||||+++|+++|||+++|||
T Consensus 314 i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t 393 (454)
T cd07109 314 VARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWT 393 (454)
T ss_pred HHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEEC
Confidence 9999999999999886421 011 8999999999999999999999
Q ss_pred cchHHHHHHHHhcCeeeEEEcCCC-CCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 619 SDINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 619 ~d~~~a~~va~~l~aG~V~VN~~~-~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+|.+++.++++++++|+|+||+.. ..++.+||||+|.||+|+++|.+++..|++ .|+++
T Consensus 394 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~---~k~i~ 453 (454)
T cd07109 394 RDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQ---TKTVA 453 (454)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhc---eeEEe
Confidence 999999999999999999999876 455678999999999999999999999988 56664
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-76 Score=665.42 Aligned_cols=404 Identities=30% Similarity=0.477 Sum_probs=369.1
Q ss_pred eeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhc-ccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH
Q psy15158 269 ECINPANESTICSVQMANSDDVDIAALAAEKAFEGE-WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347 (709)
Q Consensus 269 ~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~-W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~ 347 (709)
+++||+||+++++++.++.+++++|+++|++||+ . |+.+|.++|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 80 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL-DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK 80 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 5789999999999999999999999999999997 7 5679999999999999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhCccccccCC-CCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeC
Q psy15158 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHA-RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426 (709)
Q Consensus 348 ~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKP 426 (709)
. |+..+++.++||+..+.++.+...+.... ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 81 ~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKp 159 (455)
T cd07148 81 V-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKP 159 (455)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeC
Confidence 5 99999999999999988876654332111 011234678999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc
Q psy15158 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506 (709)
Q Consensus 427 s~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn 506 (709)
|+.+|+++.++++++.++|+|+|++|+++|++ +.++.|+.||+|+.|.||||+++|+.|++.++. .+|+++|+||||
T Consensus 160 s~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~~ 236 (455)
T cd07148 160 ALATPLSCLAFVDLLHEAGLPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGAA 236 (455)
T ss_pred CCcccHHHHHHHHHHHHcCCCcCcEEEEeCCh-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCCC
Confidence 99999999999999999999999999999854 679999999999999999999999999998873 589999999999
Q ss_pred cEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHH
Q psy15158 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKL 571 (709)
Q Consensus 507 p~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i 571 (709)
|+||++|||++.|++.+++++|+++||.|++++|||||++++|+|+++|+++++++ +++.+.+++
T Consensus 237 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 316 (455)
T cd07148 237 PVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRV 316 (455)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876 688999999
Q ss_pred HHHHHHHHhcCCEEEECCccCCC----C------------------C---------CHHHHHHHHhcCCCCCeEEEEccc
Q psy15158 572 IDYCEKAKSEGARLLIGGKRLDR----P------------------G---------DVDAVIKRANSTEYGLASGIFTSD 620 (709)
Q Consensus 572 ~~~i~~a~~~Ga~vl~GG~~~~~----~------------------g---------dldeaI~~~N~t~yGLta~V~T~d 620 (709)
.+++++++.+|+++++||...+. | | |+||||+++|+++|||+++|||+|
T Consensus 317 ~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d 396 (455)
T cd07148 317 EEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKD 396 (455)
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999999999864210 0 0 999999999999999999999999
Q ss_pred hHHHHHHHHhcCeeeEEEcCCCCCCC-CCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 621 INKAMYFVDKIDSGTVFINTYNKTDV-AAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 621 ~~~a~~va~~l~aG~V~VN~~~~~~~-~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
.+++.++++++++|+||||++....+ .+||||+|.||+|+++|.+++..|++ .|+++
T Consensus 397 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~---~k~~~ 454 (455)
T cd07148 397 LDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQ---EKMAV 454 (455)
T ss_pred HHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhc---eeEEe
Confidence 99999999999999999998764443 57999999999999999999999988 57764
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-76 Score=673.72 Aligned_cols=413 Identities=34% Similarity=0.563 Sum_probs=377.7
Q ss_pred CCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q psy15158 262 SVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGA 341 (709)
Q Consensus 262 s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk 341 (709)
+.+++.++++||+||+++++++.++.+|+++|+++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+||
T Consensus 28 ~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk 106 (524)
T PRK09407 28 GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR-AWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGK 106 (524)
T ss_pred CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 34677899999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCE
Q psy15158 342 VYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT 421 (709)
Q Consensus 342 ~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNt 421 (709)
|..++.. |+..+++.++||+..+++..+...+... .+.....+..++|+|||++|+|||||+.+.+++++|||++||+
T Consensus 107 ~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~ 184 (524)
T PRK09407 107 ARRHAFE-EVLDVALTARYYARRAPKLLAPRRRAGA-LPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNA 184 (524)
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccc-CCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCE
Confidence 9999875 9999999999999998877654322110 1112346788999999999999999999999999999999999
Q ss_pred EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEc
Q psy15158 422 VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLE 501 (709)
Q Consensus 422 VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lE 501 (709)
||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.| ++.|+||||+.+|+.|++.+++ +++|+++|
T Consensus 185 VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~-~~~~v~lE 261 (524)
T PRK09407 185 VVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGR-RLIGFSLE 261 (524)
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEE
Confidence 99999999999999999999999999999999999888899999987 5799999999999999999885 88999999
Q ss_pred CCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHH
Q psy15158 502 LGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKA 566 (709)
Q Consensus 502 lGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~ 566 (709)
+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ ++++
T Consensus 262 lGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~ 341 (524)
T PRK09407 262 LGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEA 341 (524)
T ss_pred CCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999886 6889
Q ss_pred HHHHHHHHHHHHHhcCCEEEECCccCCC-CC---------------------------------CHHHHHHHHhcCCCCC
Q psy15158 567 HLDKLIDYCEKAKSEGARLLIGGKRLDR-PG---------------------------------DVDAVIKRANSTEYGL 612 (709)
Q Consensus 567 ~~~~i~~~i~~a~~~Ga~vl~GG~~~~~-~g---------------------------------dldeaI~~~N~t~yGL 612 (709)
+.+++.+++++++++|+++++||..... .| |+||||+++|+++|||
T Consensus 342 ~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gL 421 (524)
T PRK09407 342 QLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGL 421 (524)
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999999853110 01 8999999999999999
Q ss_pred eEEEEccchHHHHHHHHhcCeeeEEEcCCCCC---CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKT---DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 613 ta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~---~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
+++|||+|.+++.++++++++|+||||+...+ ++..||||+|.||+|+++|.+++++|++ .|+++++.
T Consensus 422 sa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~---~k~v~~~~ 492 (524)
T PRK09407 422 NASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTE---SQTIATQR 492 (524)
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCC---eEEEEEcc
Confidence 99999999999999999999999999986553 3467999999999999999999998988 68888764
|
|
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-76 Score=665.46 Aligned_cols=404 Identities=37% Similarity=0.644 Sum_probs=374.4
Q ss_pred eeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH
Q psy15158 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347 (709)
Q Consensus 268 ~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~ 347 (709)
++++||+||+++++++.++.+++++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 79 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP-AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW 79 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH
Confidence 35789999999999999999999999999999998 99999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCC
Q psy15158 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427 (709)
Q Consensus 348 ~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs 427 (709)
. |+..+++.+++++.+++++.+...+.. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 80 ~-ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps 155 (451)
T cd07150 80 F-ETTFTPELLRAAAGECRRVRGETLPSD---SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPS 155 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECC
Confidence 5 999999999999999988776544422 123456789999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc
Q psy15158 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507 (709)
Q Consensus 428 ~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp 507 (709)
+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|.||||+.+|+.|++.+++ +++|+++|+|||||
T Consensus 156 ~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~ 234 (451)
T cd07150 156 EETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNP 234 (451)
T ss_pred ccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCe
Confidence 99999999999999999999999999999878899999999999999999999999999999885 78999999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ +++.+.+++.
T Consensus 235 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 314 (451)
T cd07150 235 LIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIK 314 (451)
T ss_pred eEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 5788999999
Q ss_pred HHHHHHHhcCCEEEECCccC----------C-CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchH
Q psy15158 573 DYCEKAKSEGARLLIGGKRL----------D-RP----------G---------DVDAVIKRANSTEYGLASGIFTSDIN 622 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~----------~-~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~ 622 (709)
+++++++.+|+++++||... + .+ | |+||||+++|+++|||+++|||+|.+
T Consensus 315 ~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~ 394 (451)
T cd07150 315 RQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQ 394 (451)
T ss_pred HHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 99999999999999987421 0 00 1 89999999999999999999999999
Q ss_pred HHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 623 KAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 623 ~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+++++++++++|+|+||++...+ +..||||+|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~---~k~v~ 450 (451)
T cd07150 395 RAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTE---LKWIT 450 (451)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhhe---eeEEe
Confidence 99999999999999999987655 468999999999999999999999988 56664
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-76 Score=665.34 Aligned_cols=408 Identities=43% Similarity=0.778 Sum_probs=377.5
Q ss_pred CeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHH
Q psy15158 266 SSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT 344 (709)
Q Consensus 266 ~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~ 344 (709)
.+++++||+||+++++++.++.+++++|+++|++||+ +.|+++|..+|.++|++++++|++|+++|++++++|+|||+.
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 3588999999999999999999999999999999996 249999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEe
Q psy15158 345 LALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424 (709)
Q Consensus 345 ~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVl 424 (709)
++...|+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+...+++++|||++||+||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~ 157 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTG----PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVL 157 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCC----CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeee
Confidence 98655999999999999999988776533321 22346789999999999999999999999999999999999999
Q ss_pred eCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCC
Q psy15158 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504 (709)
Q Consensus 425 KPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGG 504 (709)
|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+++|+.|++.++.+++||+++|+||
T Consensus 158 Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG 237 (462)
T cd07112 158 KPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGG 237 (462)
T ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCC
Confidence 99999999999999999999999999999999888899999999999999999999999999999885479999999999
Q ss_pred cccEEEcCCC-CHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHH
Q psy15158 505 KSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHL 568 (709)
Q Consensus 505 knp~IV~~dA-Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~ 568 (709)
+||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ +++.+.
T Consensus 238 ~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 317 (462)
T cd07112 238 KSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHF 317 (462)
T ss_pred CCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHH
Confidence 9999999999 999999999999999999999999999999999999999999999876 578899
Q ss_pred HHHHHHHHHHHhcCCEEEECCccCC--CCC---------------------------------CHHHHHHHHhcCCCCCe
Q psy15158 569 DKLIDYCEKAKSEGARLLIGGKRLD--RPG---------------------------------DVDAVIKRANSTEYGLA 613 (709)
Q Consensus 569 ~~i~~~i~~a~~~Ga~vl~GG~~~~--~~g---------------------------------dldeaI~~~N~t~yGLt 613 (709)
+++.++|++++++|+++++||.... ..| |++|||+++|+++|||+
T Consensus 318 ~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 397 (462)
T cd07112 318 DKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLA 397 (462)
T ss_pred HHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccce
Confidence 9999999999999999999886421 011 89999999999999999
Q ss_pred EEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 614 a~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
++|||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 398 ~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~---~k~i~ 461 (462)
T cd07112 398 ASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTE---LKTTW 461 (462)
T ss_pred EEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhc---eeEEE
Confidence 99999999999999999999999999987777788999999999999999999999988 56664
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-76 Score=664.25 Aligned_cols=403 Identities=46% Similarity=0.853 Sum_probs=376.1
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhH
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~e 350 (709)
+||+||+++++++.++.+++++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||+..++...|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~-~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~e 80 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFE-AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLD 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 59999999999999999999999999999998 99999999999999999999999999999999999999999987569
Q ss_pred HHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCc
Q psy15158 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430 (709)
Q Consensus 351 v~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~t 430 (709)
+..+++.++|++.+++++.+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~l~~~~~~~~~~~g~~~~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~ 156 (453)
T cd07115 81 VPRAADTFRYYAGWADKIEGEVIPVR----GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELT 156 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCceecCC----CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence 99999999999999888776543321 23456889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEE
Q psy15158 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510 (709)
Q Consensus 431 plta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV 510 (709)
|+++..+.+++.++|+|+|++++++|++.++++.|+.||+++.|+||||+.+|+.|++.++. +++|+++|+|||||+||
T Consensus 157 p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV 235 (453)
T cd07115 157 PLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIV 235 (453)
T ss_pred cHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEE
Confidence 99999999999999999999999999877899999999999999999999999999998885 89999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHH
Q psy15158 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575 (709)
Q Consensus 511 ~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i 575 (709)
++|||++.|++.+++++|.|+||.|+|++|||||++++|+|++.|+++++++ +++.+++++.+++
T Consensus 236 ~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 315 (453)
T cd07115 236 FADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYV 315 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 6789999999999
Q ss_pred HHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchH
Q psy15158 576 EKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDIN 622 (709)
Q Consensus 576 ~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~ 622 (709)
++++.+|+++++||......+ |+||||+++|+++|||+++|||+|.+
T Consensus 316 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~ 395 (453)
T cd07115 316 DVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLG 395 (453)
T ss_pred HHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHH
Confidence 999999999999886432111 89999999999999999999999999
Q ss_pred HHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 623 KAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 623 ~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
.++++++++++|+|+||+.......+||||+|.||+|+++|.+++.+|++ .|+++++
T Consensus 396 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~---~k~~~~~ 452 (453)
T cd07115 396 RAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTE---VKSVWVN 452 (453)
T ss_pred HHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhc---eEEEEEe
Confidence 99999999999999999877777789999999999999999999999988 6888765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-76 Score=665.37 Aligned_cols=422 Identities=33% Similarity=0.503 Sum_probs=387.1
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCC-CHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL-SARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~-s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+.||||+|+.+. +.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++ |.++|.++|++++++|++++++
T Consensus 3 ~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 3 KYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR-GWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999764 67899999999999999999999999999999999998 99998 9999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCC-CCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHAR-PNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
|++++++|+|||..++.. |+..+++.++|+++.++++.+...+..... ..+...+.+++|+|||++|+|||||+.+.+
T Consensus 81 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 159 (473)
T cd07082 81 VANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTV 159 (473)
T ss_pred HHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHH
Confidence 999999999999999875 999999999999999888776644322110 123456789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||+++.|+||||+++|+.|.+.
T Consensus 160 ~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 239 (473)
T cd07082 160 SKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQ 239 (473)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999999999998
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++
T Consensus 240 a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~ 316 (473)
T cd07082 240 HP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWD 316 (473)
T ss_pred hC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 65 79999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC------------CC----------C---------CHHHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD------------RP----------G---------DVDAVIK 603 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~------------~~----------g---------dldeaI~ 603 (709)
++..+.+++.++++++..+|+++++||.... .+ | |++|+|+
T Consensus 317 ~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~ 396 (473)
T cd07082 317 NGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE 396 (473)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence 4788999999999999999999999886421 00 0 8999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++|||+|.+.+.++++++++|+||||++.... ..+||||+|.||+|+++|.++++.|++ .|++++|
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~---~k~i~~~ 473 (473)
T cd07082 397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTR---RKGIVIN 473 (473)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhc---eeEEEEC
Confidence 999999999999999999999999999999999999976544 358999999999999999999999998 6887654
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-77 Score=675.35 Aligned_cols=410 Identities=43% Similarity=0.715 Sum_probs=379.0
Q ss_pred EeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHh
Q psy15158 259 FVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLD 338 (709)
Q Consensus 259 ~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e 338 (709)
|+++++ ++++++||.||++|++++.++.+++++|+++|++||+ .|+.++..+|.++|++++++|++|.++|++++++|
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e 78 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK-EWSKLPAAERARILERFADLLEERRDELAELIALE 78 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH-HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH-hhhhhhhhhHHHHHHHHHHHHhhcccccccccccc
Confidence 677655 6799999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred cCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHc
Q psy15158 339 SGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAA 418 (709)
Q Consensus 339 ~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaa 418 (709)
+|||+.++.. |+..+++.++||+.+++++.++.++.. .+...++.++|+|||++|+|||||+.++++++++||++
T Consensus 79 ~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaa 153 (462)
T PF00171_consen 79 TGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSD----PGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAA 153 (462)
T ss_dssp HTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEES----TTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHT
T ss_pred cccccccccc-hhhhhhhhhhhhhhcccceehhhcccc----cccccccccccccceeecccccccccccccchhhhhcc
Confidence 9999999997 999999999999999999877655542 44678899999999999999999999999999999999
Q ss_pred CCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcE
Q psy15158 419 GNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKV 498 (709)
Q Consensus 419 GNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v 498 (709)
||+||+|||+.+|+++..+++++.+||+|+|++|+++|++.+++..|+.||+++.|.||||+++|+.|.+.++ ++++|+
T Consensus 154 GN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~v 232 (462)
T PF00171_consen 154 GNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA-KNLKPV 232 (462)
T ss_dssp T-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH-TTTSEE
T ss_pred cccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc-cccccc
Confidence 9999999999999999999999999999999999999998999999999999999999999999999999988 489999
Q ss_pred EEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------h
Q psy15158 499 SLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------N 563 (709)
Q Consensus 499 ~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~ 563 (709)
++|+|||||+||++|||++.|++.++.++|.++||.|++++|||||++++|+|+++|+++++++ +
T Consensus 233 ~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~ 312 (462)
T PF00171_consen 233 VLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLI 312 (462)
T ss_dssp EEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCS
T ss_pred cccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999887 5
Q ss_pred cHHHHHHHHHHHHHHHhcCCEEEECCc---cCCCCC---------------------------------CHHHHHHHHhc
Q psy15158 564 HKAHLDKLIDYCEKAKSEGARLLIGGK---RLDRPG---------------------------------DVDAVIKRANS 607 (709)
Q Consensus 564 ~~~~~~~i~~~i~~a~~~Ga~vl~GG~---~~~~~g---------------------------------dldeaI~~~N~ 607 (709)
+..+.+++.+++++++.+|+++++||. .....| |++|+|+++|+
T Consensus 313 ~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 392 (462)
T PF00171_consen 313 SKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALAND 392 (462)
T ss_dssp SHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHH
T ss_pred cchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccc
Confidence 789999999999999999999999992 111112 99999999999
Q ss_pred CCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCC-CCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 608 TEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 608 t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~-~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
++|||+++|||+|.++++++++++++|+|+||+++.++.. +||||+|.||+|+++|.+++.+|++ .|+|
T Consensus 393 ~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~---~k~V 462 (462)
T PF00171_consen 393 SEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQ---IKTV 462 (462)
T ss_dssp SSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEE---EEEE
T ss_pred cCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCC---ccCC
Confidence 9999999999999999999999999999999999887765 5999999999999999998888877 5664
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-76 Score=685.81 Aligned_cols=416 Identities=20% Similarity=0.269 Sum_probs=368.2
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHh-chhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKA-FEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A-~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
++||||+|+.+. +++++++||+||+++++++.++ .|+++|+++|++| |+ .|+++|..+|+++|++++++|++|+++
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~-~W~~~~~~eR~~~L~~~a~~l~~~~~e 78 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP-ALRALTFHERARMLKALAQYLSERKEA 78 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch-hhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 478999998753 5689999999999999999999 5999999999996 97 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh--------CccccccCCCCCCCceeeeeccc-CEEEEECCC
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL--------GSTIPIAHARPNSNFTFTKREPI-GVCGLITPW 401 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~--------g~~~p~~~~~~~~~~~~~~~~P~-GVv~~I~Pw 401 (709)
|+++ ++|+|||+.++.. |+..+++.++||+..+++.. ++..|.. .+.+...++.++|+ |||++|+||
T Consensus 79 la~~-~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~P~~Gvv~~I~pw 154 (663)
T TIGR02278 79 LYAL-AATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS--KDGSFQGRHILTPKGGVAVQINAF 154 (663)
T ss_pred HHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccC--CCCccceEEEEEeCCceEEEEcCC
Confidence 9995 9999999999985 99999999999999987642 2222211 11122467899998 999999999
Q ss_pred CchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcC-CCCCcEEEecCCchhHHHHHHhCCCccEEEEcCCh
Q psy15158 402 NYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480 (709)
Q Consensus 402 NfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAG-lP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt 480 (709)
|||+.+.+++++|||++||+||+|||+.+|+++..+++++.+|| +|+|++|+|+|+. ++.+..+++++.|+||||+
T Consensus 155 N~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~ 231 (663)
T TIGR02278 155 NFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSA 231 (663)
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 9999999999853 3334444788999999999
Q ss_pred HHHHHHHHHHH-hcCCCcEEEcCCCcccEEEcCCCC-----HHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHH
Q psy15158 481 VTGMKIMKSAA-ESNLKKVSLELGGKSPLVIFDDYN-----LDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEK 554 (709)
Q Consensus 481 ~~g~~I~~~aa-~~~~k~v~lElGGknp~IV~~dAD-----le~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~ 554 (709)
++|+.|++.++ ..+++|+++|||||||+||++||| ++.|++.+++++|.|+||.|+|++|||||++++|+|+++
T Consensus 232 ~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~ 311 (663)
T TIGR02278 232 ATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKA 311 (663)
T ss_pred HHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHH
Confidence 99999999753 348899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC-----------------------
Q psy15158 555 VVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------------------- 596 (709)
Q Consensus 555 L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g----------------------- 596 (709)
|+++++++ +++.+.+++.++|++++++|+++++||.... .|
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CCeeEccEEEeeCCcchhhHHhccc
Confidence 99999887 6889999999999999999999999985421 11
Q ss_pred -----------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhc--CeeeEEE-cCCC-------CC-CCCCCCCCCC
Q psy15158 597 -----------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKI--DSGTVFI-NTYN-------KT-DVAAPFGGFK 654 (709)
Q Consensus 597 -----------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l--~aG~V~V-N~~~-------~~-~~~~PFGG~k 654 (709)
|++|||+++|+++|||+++|||+|.++++++++++ ++|+||| |+.. .. .+.+||||+|
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 89999999999999999999999999999999999 8999999 6521 11 2468999999
Q ss_pred CCCCCCcc-ChHHHHHHHHHhceeEEEE
Q psy15158 655 QSGFGKDL-DINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 655 ~SG~G~~~-G~~~~~~ftr~~~~ktV~i 681 (709)
+||+|++. |.+.+..|++ .|++..
T Consensus 471 ~SG~G~~~g~~~~l~~f~~---~k~v~~ 495 (663)
T TIGR02278 471 RAGGGEELGGLRSVKHYMQ---RTAIQG 495 (663)
T ss_pred cCcCCCccchHHHHHHhce---eEEEEc
Confidence 99999996 4688888888 566644
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-76 Score=662.14 Aligned_cols=401 Identities=31% Similarity=0.531 Sum_probs=367.2
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhH
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~e 350 (709)
.||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+||+..++.. |
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-e 78 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR-AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFE-E 78 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-H
Confidence 38999999999999999999999999999998 999999999999999999999999999999999999999999974 9
Q ss_pred HHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCc
Q psy15158 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430 (709)
Q Consensus 351 v~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~t 430 (709)
+..+++.++||+..+.+..+...+.. ..+.....+.+++|+|||++|+|||||+...+++++|||++||+||+|||+.+
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 79 VLDVAIVARYYARRAERLLKPRRRRG-AIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccc-cCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 99999999999999887765432111 11112356889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEE
Q psy15158 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510 (709)
Q Consensus 431 plta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV 510 (709)
|+++..+.+++.++|+|+|++|+++|++.++++.|+.|+ +.|.||||+++|+.|++.+++ +++|+++|+|||||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~--~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNA--DYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhCC--CEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence 999999999999999999999999998888999999985 689999999999999999885 78999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHH
Q psy15158 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575 (709)
Q Consensus 511 ~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i 575 (709)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++ +++.+.+++.+++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 5889999999999
Q ss_pred HHHHhcCCEEEECCccCCC-CC---------------------------------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 576 EKAKSEGARLLIGGKRLDR-PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 576 ~~a~~~Ga~vl~GG~~~~~-~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
++++.+|+++++||..... .+ |+||||+++|+++|||+++|||+|.
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 9999999999999853110 00 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCC---CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKT---DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~---~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+++.++++++++|+||||+.... .+.+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~---~k~v~ 453 (454)
T cd07101 395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTE---TQTVA 453 (454)
T ss_pred HHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcc---eEEEe
Confidence 99999999999999999987543 3568999999999999999999999988 56664
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-76 Score=659.54 Aligned_cols=402 Identities=23% Similarity=0.339 Sum_probs=356.8
Q ss_pred ChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHH
Q psy15158 286 NSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWC 365 (709)
Q Consensus 286 ~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~ 365 (709)
...|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+|||+.++...|+..+++.++|+++.+
T Consensus 8 ~~~~v~~av~~a~~af~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 8 GAADASILVTELRRSFD-DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred CHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999998 99999999999999999999999999999999999999999987669999999999999998
Q ss_pred HhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcC
Q psy15158 366 DKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG 445 (709)
Q Consensus 366 ~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAG 445 (709)
++..+...............++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+.||+++..+++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 877652111000011123467899999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHh
Q psy15158 446 FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG 525 (709)
Q Consensus 446 lP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~ 525 (709)
+|+|++|+|+|.+ +.+..|+. |++++|+||||+++|+.|++.+++ +++|+++|||||||+||++|||++.|++.+++
T Consensus 166 lp~gvv~vv~G~~-~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~ 242 (484)
T PLN02174 166 LDSSAVRVVEGAV-TETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIA 242 (484)
T ss_pred CCCCEEEEEECCh-HHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHH
Confidence 9999999999854 45777776 899999999999999999999885 89999999999999999999999999999999
Q ss_pred hhh-ccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCc
Q psy15158 526 GVF-FNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGK 590 (709)
Q Consensus 526 saf-~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~ 590 (709)
++| .|+||.|+|++|+|||++++|+|+++|+++++++ +++.+.+++.++|+++ .+|+++++||.
T Consensus 243 g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~ 321 (484)
T PLN02174 243 GKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGE 321 (484)
T ss_pred HHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCC
Confidence 999 6999999999999999999999999999999876 6789999999999997 77899999985
Q ss_pred cCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEE
Q psy15158 591 RLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637 (709)
Q Consensus 591 ~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~ 637 (709)
.. ..| |+||||+++|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 322 ~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~ 400 (484)
T PLN02174 322 KD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400 (484)
T ss_pred cC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEE
Confidence 42 112 99999999999999999999999999999999999999999
Q ss_pred EcCCCCCC--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccC-CCCC-CCCCCCCc
Q psy15158 638 INTYNKTD--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYN-KTDV-AAPFGGFK 697 (709)
Q Consensus 638 VN~~~~~~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~-~~~~-~~Pf~g~k 697 (709)
||++.... +..||||+|.||+|+++|.+++++|++ .|+|+++... ...+ ..||++.|
T Consensus 401 IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~---~K~v~~~~~~~~~~~~~pp~~~~~ 461 (484)
T PLN02174 401 VNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSH---KKAVLYRSLFGDSAVRYPPYSRGK 461 (484)
T ss_pred ECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcc---eEEEEECCccCcccccCCCCChHH
Confidence 99876554 467999999999999999999999988 6899877432 2233 35775433
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-75 Score=658.74 Aligned_cols=404 Identities=35% Similarity=0.580 Sum_probs=372.7
Q ss_pred eeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh
Q psy15158 269 ECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348 (709)
Q Consensus 269 ~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~ 348 (709)
+++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|.+++++|++++++|++++++|+|||..++..
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE-NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 5789999999999999999999999999999998 999999999999999999999999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccccccCCC-CCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHAR-PNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs 427 (709)
|+..+++.++||+..+.+..++..+..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 81 -ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps 159 (453)
T cd07094 81 -EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPA 159 (453)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999999999999888876654433211 123446788999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc
Q psy15158 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507 (709)
Q Consensus 428 ~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp 507 (709)
+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||+++.|.||||+++|+.|++.+ +++|+++|+|||||
T Consensus 160 ~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~~ 236 (453)
T cd07094 160 SKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNAP 236 (453)
T ss_pred CcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCCc
Confidence 999999999999999999999999999998888899999999999999999999999999976 57999999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
+||++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++ +++.+.+++.
T Consensus 237 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~ 316 (453)
T cd07094 237 VIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVE 316 (453)
T ss_pred eEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 6889999999
Q ss_pred HHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchH
Q psy15158 573 DYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDIN 622 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~ 622 (709)
+++++++.+|+++++||.... .+ | |++|||+++|+++|||+++|||+|.+
T Consensus 317 ~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (453)
T cd07094 317 RWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLN 396 (453)
T ss_pred HHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHH
Confidence 999999999999999874310 00 0 89999999999999999999999999
Q ss_pred HHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 623 KAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 623 ~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
++.++++++++|+|+||++... .+.+||||+|+||+|+++|.++++.|++ .|+++
T Consensus 397 ~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~---~k~i~ 452 (453)
T cd07094 397 VAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTE---EKTVV 452 (453)
T ss_pred HHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhc---eeEEe
Confidence 9999999999999999998654 3578999999999999999999999998 56664
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-75 Score=656.22 Aligned_cols=400 Identities=31% Similarity=0.471 Sum_probs=370.6
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhH
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~e 350 (709)
+||+||+++++++.++.+++++++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||..++. .|
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~e 78 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK-GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GE 78 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HH
Confidence 48999999999999999999999999999998 99999999999999999999999999999999999999999987 49
Q ss_pred HHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCc
Q psy15158 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430 (709)
Q Consensus 351 v~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~t 430 (709)
+..+++.++|++..+++..+..... .+.+...+.+++|+|||++|+|||||+...+++++|||++||+||+|||+.+
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 155 (452)
T cd07102 79 IRGMLERARYMISIAEEALADIRVP---EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQT 155 (452)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccC---CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999988765543211 1234456789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEE
Q psy15158 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510 (709)
Q Consensus 431 plta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV 510 (709)
|+++..+.+++.++|+|+|++|+++|++ +.++.|+.||+|+.|.||||+++|+.|++.++. +++|+++|+|||||+||
T Consensus 156 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV 233 (452)
T cd07102 156 PLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYV 233 (452)
T ss_pred cHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEE
Confidence 9999999999999999999999999976 789999999999999999999999999998874 88999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHH
Q psy15158 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575 (709)
Q Consensus 511 ~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i 575 (709)
++|||++.|++.+++|+|+++||.|++++|||||++++|+|+++|+++++++ ++..+.+++.+++
T Consensus 234 ~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i 313 (452)
T cd07102 234 RPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQI 313 (452)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998876 5788899999999
Q ss_pred HHHHhcCCEEEECCccCC---CCC---------------------------------CHHHHHHHHhcCCCCCeEEEEcc
Q psy15158 576 EKAKSEGARLLIGGKRLD---RPG---------------------------------DVDAVIKRANSTEYGLASGIFTS 619 (709)
Q Consensus 576 ~~a~~~Ga~vl~GG~~~~---~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~ 619 (709)
++++.+|+++++||.... ..| |++|||+++|+++|||+++|||+
T Consensus 314 ~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 393 (452)
T cd07102 314 ADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTK 393 (452)
T ss_pred HHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 999999999999986421 111 89999999999999999999999
Q ss_pred chHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 620 d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
|.+++.++++++++|+||||++...++..||||+|.||+|+++|.+++.+|++ .|+++
T Consensus 394 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~---~k~~~ 451 (452)
T cd07102 394 DIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTR---PKSYH 451 (452)
T ss_pred CHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhc---eeEEe
Confidence 99999999999999999999987667778999999999999999999999998 46664
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-75 Score=663.15 Aligned_cols=413 Identities=19% Similarity=0.271 Sum_probs=364.2
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhc-hhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~-~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+.||+|+|+.+. +.+++++||+||+++++++. +.+|+++|+++|++|+ + .|+++|..+|+++|++++++|++++++
T Consensus 6 ~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~-~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (521)
T PRK11903 6 ANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA-ALRALTYAQRAALLAAIVKVLQANRDA 82 (521)
T ss_pred hhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh-hhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999753 46799999999999999996 8899999999999995 7 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCC-----CCCCCceeeeecc-cCEEEEECCCCch
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHA-----RPNSNFTFTKREP-IGVCGLITPWNYP 404 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~-----~~~~~~~~~~~~P-~GVv~~I~PwNfP 404 (709)
|++++++|+|||+.++.. |+..+++.++||+.++..+.+...+.... .......+..++| +|||++|+|||||
T Consensus 83 la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 161 (521)
T PRK11903 83 YYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP 161 (521)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchH
Confidence 999999999999999985 99999999999999987765432211100 0011224567889 6999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcC-CCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHH
Q psy15158 405 LMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTG 483 (709)
Q Consensus 405 l~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAG-lP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g 483 (709)
+.+..++++|||++||+||+|||+.||+++.++++++.++| +|+|++|+|+|++.++++.| ++++.|+||||+++|
T Consensus 162 ~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 162 AWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 99999999999776655544 789999999999999
Q ss_pred HHHHHHHH-hcCCCcEEEcCCCcccEEEcCCCC-----HHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHH
Q psy15158 484 MKIMKSAA-ESNLKKVSLELGGKSPLVIFDDYN-----LDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVT 557 (709)
Q Consensus 484 ~~I~~~aa-~~~~k~v~lElGGknp~IV~~dAD-----le~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~ 557 (709)
+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|++
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~ 318 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAA 318 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHH
Confidence 99999753 347899999999999999999999 599999999999999999999999999999999999999999
Q ss_pred HHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC------CCC--------------------
Q psy15158 558 EVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD------RPG-------------------- 596 (709)
Q Consensus 558 ~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~------~~g-------------------- 596 (709)
+++++ ++..+.+++.++|+. ..+|+++++||.... ..|
T Consensus 319 ~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 319 RLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99987 678899999999985 457999999985410 011
Q ss_pred ---------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhc--CeeeEEEcCCCC---------CCCCCCC
Q psy15158 597 ---------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKI--DSGTVFINTYNK---------TDVAAPF 650 (709)
Q Consensus 597 ---------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l--~aG~V~VN~~~~---------~~~~~PF 650 (709)
|++|+|+++|+++|||+++|||+|.+++.++++++ ++|+||||+... ..+.+||
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf 477 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLH 477 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence 89999999999999999999999999999999999 999999997542 2246799
Q ss_pred CCCCCCCCCCccC-hHHHHHHHH
Q psy15158 651 GGFKQSGFGKDLD-INKAMYFVD 672 (709)
Q Consensus 651 GG~k~SG~G~~~G-~~~~~~ftr 672 (709)
||+|.||+|++.| .+.+..|++
T Consensus 478 GG~k~SG~Gr~~g~~~~l~~~t~ 500 (521)
T PRK11903 478 GGPGRAGGGEELGGLRALAFYHR 500 (521)
T ss_pred CCCCcCcCCcccccHHHHHHHhc
Confidence 9999999999966 577788888
|
|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-75 Score=654.64 Aligned_cols=397 Identities=39% Similarity=0.664 Sum_probs=366.5
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|||+.++..
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~- 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP-GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF- 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 479999999999999999999999999999998 999999999999999999999999999999999999999999885
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.++|++.... .+...+. . .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ev~~~~~~l~~~~~~~~--~~~~~~~---~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~ 152 (446)
T cd07106 79 EVGGAVAWLRYTASLDL--PDEVIED---D-DTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPF 152 (446)
T ss_pred HHHHHHHHHHHHHhhhh--cCccccC---C-CCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999998763 2222221 1 2245688999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..+++++.++ +|+|++|+++|+ .+++..|+.||+++.|+||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 153 ~p~~~~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~i 229 (446)
T cd07106 153 TPLCTLKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAI 229 (446)
T ss_pred chHHHHHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeE
Confidence 999999999999996 999999999985 4689999999999999999999999999999885 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDY 574 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~ 574 (709)
|++|||++.|++.+++++|+|+||.|+|++|||||++++|+|+++|+++++++ +++.+.+++.++
T Consensus 230 V~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~ 309 (446)
T cd07106 230 VLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKEL 309 (446)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 578999999999
Q ss_pred HHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 575 CEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
++++..+|+++++||...+..| |+||||+++|+++|||+++|||+|.
T Consensus 310 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 389 (446)
T cd07106 310 VEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDL 389 (446)
T ss_pred HHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999999986432111 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+++.++++++++|+||||++...++.+||||+|.||+|+++|.+++.+|++ .|+++
T Consensus 390 ~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~---~k~v~ 445 (446)
T cd07106 390 ERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQ---TQVIN 445 (446)
T ss_pred HHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhc---eeEEe
Confidence 999999999999999999988777789999999999999999999999988 46664
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-75 Score=653.87 Aligned_cols=401 Identities=42% Similarity=0.728 Sum_probs=369.6
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||+++++++.++.+|+++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+|||..++...
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~-~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 79 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP-SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDD 79 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHH
Confidence 469999999999999999999999999999998 9999999999999999999999999999999999999999877556
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.+++++..++.+.+...+.. . .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 80 ev~~~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~ 156 (450)
T cd07092 80 ELPGAVDNFRFFAGAARTLEGPAAGEY--L-PGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSET 156 (450)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccCcc--C-CCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 999999999999998877655432211 1 1234678999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..+.+++.+ |+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 157 ~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~i 234 (450)
T cd07092 157 TPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVI 234 (450)
T ss_pred chHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeE
Confidence 99999999999999 999999999999877799999999999999999999999999999885 7899999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDY 574 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~ 574 (709)
|++|||++.|++.+++|+|+|+||.|++++|||||++++|+|+++|+++++++ +++.+.+++.++
T Consensus 235 V~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~ 314 (450)
T cd07092 235 VFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGF 314 (450)
T ss_pred ECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 577889999999
Q ss_pred HHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 575 CEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
++++. +|+++++||...+..| |+||||+++|+++|||+++|||+|.
T Consensus 315 i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~ 393 (450)
T cd07092 315 VERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDV 393 (450)
T ss_pred HHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99998 9999999986432111 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+++.++++++++|+|+||++....+.+||||+|+||+|+++|.+++.+|++ .|+++
T Consensus 394 ~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~---~k~~~ 449 (450)
T cd07092 394 GRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTR---IKHVM 449 (450)
T ss_pred HHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHhe---eeEEe
Confidence 999999999999999999987777789999999999999999999999988 56664
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-75 Score=653.23 Aligned_cols=401 Identities=19% Similarity=0.267 Sum_probs=358.0
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcc--cCCCHHHH----HHHHHHHHHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEW--SRLSARDR----GHLMFKLADLMEQ 326 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W--~~~s~~eR----~~iL~r~AdlL~~ 326 (709)
.||+|+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+ .| ..++.++| .++|.+++++|++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~-~W~~~~~~~~~R~l~~~~il~~~a~~l~~ 77 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK-SGLHNPLKNPERYLLYGDVSHRVAHELRK 77 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-hccccCCCHHHHhhhHHHHHHHHHHHHHc
Confidence 3799999864 46899999999999999999999999999999999998 88 66789999 8999999999999
Q ss_pred c--HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCch
Q psy15158 327 N--KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYP 404 (709)
Q Consensus 327 ~--~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP 404 (709)
+ .++|++++++|+|||+.++.. |+..+++.++||++.+.+..+...+..... .+...+++++|+|||++|+|||||
T Consensus 78 ~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~-~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 78 PEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFNVPGDH-QGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCC-CCceeEEEEecceEEEEECCCchH
Confidence 8 499999999999999999985 999999999999998877766542111111 123568899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHH
Q psy15158 405 LMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484 (709)
Q Consensus 405 l~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~ 484 (709)
+++.+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+ +..|+.|+++++|+||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999997665 55688999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEcCCCcccEEEcCCC-CHHHHHHHHHhhhhccCCCcccCCcEEEEeCcc-HHHHHHHHHHHHHhh
Q psy15158 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI-YDAFLEKVVTEVKKM 562 (709)
Q Consensus 485 ~I~~~aa~~~~k~v~lElGGknp~IV~~dA-Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi-~d~fl~~L~~~~~~l 562 (709)
.|...++ +++++|+||+||+||++|| |++.|++.++.++|.|+||.|+|++|+|||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9988765 5799999999999999999 999999999999999999999999999999995 689999999998876
Q ss_pred ----------hcHHHHHHHHHHHHHHHh-cCCEEEECCccCC------------------C-------CC----------
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKS-EGARLLIGGKRLD------------------R-------PG---------- 596 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~-~Ga~vl~GG~~~~------------------~-------~g---------- 596 (709)
++.. .+++.++++++++ +|+++++||...+ . +.
T Consensus 311 ~~g~~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFG 389 (489)
T cd07126 311 KLEDLTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFG 389 (489)
T ss_pred ccCCCcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcC
Confidence 5556 8999999999997 8999999874210 0 01
Q ss_pred ---------C--HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeee--EEEcCCCCCCCC----CCCCCCCCCCCC
Q psy15158 597 ---------D--VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGT--VFINTYNKTDVA----APFGGFKQSGFG 659 (709)
Q Consensus 597 ---------d--ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~--V~VN~~~~~~~~----~PFGG~k~SG~G 659 (709)
| +||||+++|+++|||++||||+|.+++.++++++++|+ |+||+.+.+++. .||||+|.||+|
T Consensus 390 PVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g 469 (489)
T cd07126 390 PFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIG 469 (489)
T ss_pred CEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCC
Confidence 6 89999999999999999999999999999999999999 558887777764 899999999999
Q ss_pred CccCh
Q psy15158 660 KDLDI 664 (709)
Q Consensus 660 ~~~G~ 664 (709)
++..+
T Consensus 470 ~~~~~ 474 (489)
T cd07126 470 TPEAI 474 (489)
T ss_pred CHhHH
Confidence 88543
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-75 Score=653.06 Aligned_cols=403 Identities=44% Similarity=0.780 Sum_probs=372.6
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~ 348 (709)
++||+||++|++++.++.+++++|+++|++|+. +.|+.+|.++|.++|++++++|.+++++|++++++|+|||+.++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999996 2599999999999999999999999999999999999999999885
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~ 428 (709)
|+..+++.++||+.+.+++.+...+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 -ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~ 156 (457)
T cd07114 81 -QVRYLAEWYRYYAGLADKIEGAVIPVD---KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSE 156 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccC---CCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCc
Confidence 999999999999998877765433321 0224467899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE
Q psy15158 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508 (709)
Q Consensus 429 ~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~ 508 (709)
.+|+++..++++|.++|+|+|++|+++|++.++++.|+.|+++++|.||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 157 ~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~ 235 (457)
T cd07114 157 HTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPN 235 (457)
T ss_pred cchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCee
Confidence 9999999999999999999999999999877899999999999999999999999999999885 789999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHH
Q psy15158 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLID 573 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~ 573 (709)
||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ +++.+.+++.+
T Consensus 236 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 315 (457)
T cd07114 236 IVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVER 315 (457)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875 58899999999
Q ss_pred HHHHHHhcCCEEEECCccCCC----CC---------------------------------CHHHHHHHHhcCCCCCeEEE
Q psy15158 574 YCEKAKSEGARLLIGGKRLDR----PG---------------------------------DVDAVIKRANSTEYGLASGI 616 (709)
Q Consensus 574 ~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dldeaI~~~N~t~yGLta~V 616 (709)
++++++.+|+++++||..... .| |+||||+++|+++|||+++|
T Consensus 316 ~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~i 395 (457)
T cd07114 316 YVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGI 395 (457)
T ss_pred HHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEE
Confidence 999999999999999864320 11 89999999999999999999
Q ss_pred EccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 617 ~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++|++ .|+++
T Consensus 396 ft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~---~k~~~ 456 (457)
T cd07114 396 WTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQ---TKSVW 456 (457)
T ss_pred ECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhc---eeEEe
Confidence 99999999999999999999999987777788999999999999999999999998 46654
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-75 Score=652.56 Aligned_cols=400 Identities=41% Similarity=0.684 Sum_probs=368.2
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChH-HHHHh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVY-TLALK 348 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~-~~a~~ 348 (709)
++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||++ .++.
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~- 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP-EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR- 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-
Confidence 479999999999999999999999999999998 9999999999999999999999999999999999999997 5777
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~ 428 (709)
.|+..+++.++|++..+.++.+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 79 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~ 154 (457)
T cd07108 79 PEAAVLADLFRYFGGLAGELKGETLPFG----PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAE 154 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeccC----CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 4999999999999998877766544321 234467889999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE
Q psy15158 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508 (709)
Q Consensus 429 ~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~ 508 (709)
.+|+++..+.+++.++ +|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 155 ~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~ 232 (457)
T cd07108 155 DAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPM 232 (457)
T ss_pred CCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCee
Confidence 9999999999999986 99999999999877899999999999999999999999999999885 789999999999999
Q ss_pred EEcCCCCHHHHHHHHHhh-hhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 509 VIFDDYNLDKAVRMSMGG-VFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~s-af~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
||++|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++ +++.+.+++.
T Consensus 233 iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~ 312 (457)
T cd07108 233 IVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVC 312 (457)
T ss_pred EECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence 999999999999999999 599999999999999999999999999999998876 5789999999
Q ss_pred HHHHHHHh-cCCEEEECCccCCC----CC---------------------------------CHHHHHHHHhcCCCCCeE
Q psy15158 573 DYCEKAKS-EGARLLIGGKRLDR----PG---------------------------------DVDAVIKRANSTEYGLAS 614 (709)
Q Consensus 573 ~~i~~a~~-~Ga~vl~GG~~~~~----~g---------------------------------dldeaI~~~N~t~yGLta 614 (709)
++++++++ +|+++++||..... .| |+||||+++|+++|||++
T Consensus 313 ~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~ 392 (457)
T cd07108 313 GYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAA 392 (457)
T ss_pred HHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCcee
Confidence 99999998 99999999864310 11 899999999999999999
Q ss_pred EEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHH-HHHHHHHhceeEEE
Q psy15158 615 GIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINK-AMYFVDKIDSGTVF 680 (709)
Q Consensus 615 ~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~-~~~ftr~~~~ktV~ 680 (709)
+|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.++ +..|++ .|+++
T Consensus 393 ~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~---~k~i~ 456 (457)
T cd07108 393 YVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQ---KKTVN 456 (457)
T ss_pred EEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhc---eEEEe
Confidence 9999999999999999999999999987666678999999999999999877 477877 46654
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-75 Score=652.54 Aligned_cols=405 Identities=33% Similarity=0.556 Sum_probs=368.8
Q ss_pred eeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH
Q psy15158 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347 (709)
Q Consensus 268 ~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~ 347 (709)
++++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 79 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR-PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR 79 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence 36789999999999999999999999999999998 99999999999999999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhCccccccCC-CCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeC
Q psy15158 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHA-RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426 (709)
Q Consensus 348 ~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKP 426 (709)
. |+..+++.++|++..+.+..++..+.... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 80 ~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKp 158 (452)
T cd07147 80 G-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKP 158 (452)
T ss_pred H-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 99999999999999887765543322110 012334577899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc
Q psy15158 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506 (709)
Q Consensus 427 s~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn 506 (709)
|+.+|+++.++++++.++|+|+|++|+++|+ .+.+..|+.||+++.|.||||+.+|+.|.+.++ .+|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~---~~~v~lelgG~~ 234 (452)
T cd07147 159 ASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG---KKKVVLELGGNA 234 (452)
T ss_pred CCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC---cCceEeecCCCC
Confidence 9999999999999999999999999999996 467899999999999999999999999999876 379999999999
Q ss_pred cEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHH
Q psy15158 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKL 571 (709)
Q Consensus 507 p~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i 571 (709)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.++++ +++.+.+++
T Consensus 235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 314 (452)
T cd07147 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERV 314 (452)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887 578899999
Q ss_pred HHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 572 IDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 572 ~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
.+++++++.+|+++++||.... .+ | |+||||+++|+++|||+++|||+|.
T Consensus 315 ~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~ 394 (452)
T cd07147 315 EGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDL 394 (452)
T ss_pred HHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999999999885210 00 1 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
+++.++++++++|+||||+.+... ..+||||+|.||+|+++|.++++.|++ .|++++
T Consensus 395 ~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~---~k~i~~ 452 (452)
T cd07147 395 EKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTE---PRLLVI 452 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcc---eeEEeC
Confidence 999999999999999999876543 468999999999999999999999998 577653
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=650.34 Aligned_cols=401 Identities=33% Similarity=0.560 Sum_probs=367.6
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhH
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~e 350 (709)
+||+||+++++++.++.+++++|+++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+||+..++.. |
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-e 78 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR-AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL-E 78 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-H
Confidence 49999999999999999999999999999998 999999999999999999999999999999999999999998774 9
Q ss_pred HHHHHHHHHHHHHHHHhhhCcc-ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 351 VGMSIDTWKYFAGWCDKILGST-IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 351 v~~aid~lr~~a~~~~~~~g~~-~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
+..+++.++|++..+.++.+.. .+..... .+...+++++|+|||++|+|||||+.+.+++++|||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 79 VLLALEAIDWAARNAPRVLAPRKVPTGLLM-PNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccCcccC-CCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 9999999999999988776442 2211001 2345688999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..+++++.++|+|+|++|+++|++ ++++.|+.|+ ++.|+||||+++|+.|.+.+++ +++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~~-vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDAG-VDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 99999999999999999999999999976 6889999884 9999999999999999999885 7999999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDY 574 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~ 574 (709)
|++|||++.|++.+++++|.++||.|+|++|||||++++|+|+++|+++++++ +++.+.+++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 578899999999
Q ss_pred HHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 575 CEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
+++++++|+++++||......| |+||||+++|+++|||+++|||+|.
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL 394 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 9999999999999986531111 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
++++++++++++|+||||+..... ..+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~---~k~v~ 452 (453)
T cd07099 395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCR---PKAIA 452 (453)
T ss_pred HHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcc---eEEEe
Confidence 999999999999999999876543 478999999999999999999999988 46653
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=650.74 Aligned_cols=405 Identities=32% Similarity=0.493 Sum_probs=366.8
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhH
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~e 350 (709)
+||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.++...|
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e 79 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR-EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGE 79 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 59999999999999999999999999999998 99999999999999999999999999999999999999999987669
Q ss_pred HHHHHHHHHHHHHHHHhhhCc-cccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 351 VGMSIDTWKYFAGWCDKILGS-TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 351 v~~aid~lr~~a~~~~~~~g~-~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
+..+++.++|++..+++.... ..+.... ......++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 80 ILVTCEKIRWTLKHGEKALRPESRPGGLL-MFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCccc-cCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999887764432 2221100 01233567899999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHH----HHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCc
Q psy15158 430 SPLTALKLAELS----VRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505 (709)
Q Consensus 430 tplta~~l~ell----~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGk 505 (709)
+|+++..+++++ .++|+|+|++|+|+|++ ++++.|+.||+|+.|.||||+.+|+.|.+.+++ +++|+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence 999999766554 68999999999999975 789999999999999999999999999999885 799999999999
Q ss_pred ccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHH
Q psy15158 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDK 570 (709)
Q Consensus 506 np~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~ 570 (709)
||+||++|||++.|++.++.++|.++||.|++++|||||++++|+|+++|+++++.+ +++.+.++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998876 68899999
Q ss_pred HHHHHHHHHhcCCEEEECCccCCC----CC---------------------------------CHHHHHHHHhcCCCCCe
Q psy15158 571 LIDYCEKAKSEGARLLIGGKRLDR----PG---------------------------------DVDAVIKRANSTEYGLA 613 (709)
Q Consensus 571 i~~~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dldeaI~~~N~t~yGLt 613 (709)
+.+++++++.+|+++++||..... .| |+||||+++|+++|||+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs 396 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 999999999999999999854211 11 89999999999999999
Q ss_pred EEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 614 a~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|||+|.+++.++++++++|+||||..+... ..+||||+|.||+|+++|.+++++|++ .|+++++
T Consensus 397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~---~k~~~~~ 464 (465)
T cd07098 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCN---PKSVTED 464 (465)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhhe---eEEEEEe
Confidence 99999999999999999999999999876443 478999999999999999999999988 6888765
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-74 Score=649.40 Aligned_cols=402 Identities=41% Similarity=0.677 Sum_probs=374.0
Q ss_pred eecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh
Q psy15158 270 CINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349 (709)
Q Consensus 270 v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ 349 (709)
++||+||++|++++.++.+++++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+||+..++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~- 78 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK-TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG- 78 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-
Confidence 469999999999999999999999999999998 999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCC
Q psy15158 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429 (709)
Q Consensus 350 ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~ 429 (709)
|+..+++.++|++..++++.+...+... .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ev~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~ 155 (451)
T cd07103 79 EVDYAASFLEWFAEEARRIYGRTIPSPA---PGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEE 155 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCC---CCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 9999999999999998887765444321 2345678999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 430 tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+|+++..++++|.++|+|+|++|+++|++.+.++.|+.||++++|.||||+.+|+.|.+.+++ +++|+++|+|||||+|
T Consensus 156 ~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~i 234 (451)
T cd07103 156 TPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFI 234 (451)
T ss_pred CcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEE
Confidence 999999999999999999999999999877889999999999999999999999999999885 8899999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHH
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDY 574 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~ 574 (709)
|++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++ +++.+.+++.++
T Consensus 235 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~ 314 (451)
T cd07103 235 VFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEAL 314 (451)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 477899999999
Q ss_pred HHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 575 CEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
+++++.+|+++++||......| |++|||+++|+++|||+++|||+|.
T Consensus 315 i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 394 (451)
T cd07103 315 VEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDL 394 (451)
T ss_pred HHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999999886432111 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+.++++++++++|+|+||++..+++.+||||.|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~---~k~v~ 450 (451)
T cd07103 395 ARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLE---TKYVS 450 (451)
T ss_pred HHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhc---eeEEe
Confidence 999999999999999999988777789999999999999999999999988 46653
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-74 Score=677.03 Aligned_cols=417 Identities=20% Similarity=0.284 Sum_probs=366.2
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHh-chhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKA-FEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A-~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.++||||+|+.+ ++..++++||+||+++++++.++ +|+++|+++|++| |+ .|+++|+.+|+++|++++++|++|++
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~-~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 5 LQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP-ALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred ccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh-hhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 458999999976 45679999999999999999997 6999999999998 77 89999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh--------CccccccCCCCCCCceeeeeccc-CEEEEECC
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL--------GSTIPIAHARPNSNFTFTKREPI-GVCGLITP 400 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~--------g~~~p~~~~~~~~~~~~~~~~P~-GVv~~I~P 400 (709)
+|+++ ++|+|||+.++.. |+..+++.++||+.++++.. ++..+.. .+.....+..++|+ |||++|+|
T Consensus 82 ela~l-~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~p~~GVv~~I~P 157 (675)
T PRK11563 82 ELYAL-SAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS--KGGTFAGRHILTPLEGVAVHINA 157 (675)
T ss_pred HHHHH-HHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCcccccc--CCCcccceEEEeecCceEEEECC
Confidence 99985 8999999999985 99999999999999886653 2222211 11112246788997 99999999
Q ss_pred CCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcC-CCCCcEEEecCCchhHHHHHHhCCCccEEEEcCC
Q psy15158 401 WNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGS 479 (709)
Q Consensus 401 wNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAG-lP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGS 479 (709)
||||+++++++++|||++||+||+|||+.||+++..+++++.++| +|+|++|+|+|++ ++.+..++++++|+||||
T Consensus 158 wNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~~~i~~v~FTGS 234 (675)
T PRK11563 158 FNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHLDGQDVVTFTGS 234 (675)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999863 233444578999999999
Q ss_pred hHHHHHHHHHH-HhcCCCcEEEcCCCcccEEEcCCCC-----HHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHH
Q psy15158 480 TVTGMKIMKSA-AESNLKKVSLELGGKSPLVIFDDYN-----LDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLE 553 (709)
Q Consensus 480 t~~g~~I~~~a-a~~~~k~v~lElGGknp~IV~~dAD-----le~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~ 553 (709)
+++|+.|++.+ +..+++|+++|||||||+||++||| ++.|++.+++++|.|+||.|+|++|+|||+++||+|++
T Consensus 235 ~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~ 314 (675)
T PRK11563 235 AATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIE 314 (675)
T ss_pred HHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHH
Confidence 99999999863 2348999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccC-------CCCC---------------
Q psy15158 554 KVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL-------DRPG--------------- 596 (709)
Q Consensus 554 ~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-------~~~g--------------- 596 (709)
+|+++++++ +++.+.+++.++|++++++ +++++||... ...|
T Consensus 315 ~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~ 393 (675)
T PRK11563 315 ALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLE 393 (675)
T ss_pred HHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchh
Confidence 999999987 6889999999999999998 8999998421 0011
Q ss_pred --------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcC--eeeEEEcCCCC--------C-C
Q psy15158 597 --------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKID--SGTVFINTYNK--------T-D 645 (709)
Q Consensus 597 --------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~--aG~V~VN~~~~--------~-~ 645 (709)
|+||||+++|+++|||+++|||+|.+++.+++++++ +|+||||+.+. . .
T Consensus 394 ~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~ 473 (675)
T PRK11563 394 APAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPL 473 (675)
T ss_pred hhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCC
Confidence 899999999999999999999999999999999997 99999997532 1 1
Q ss_pred CCCCCCCCCCCCCCCcc-ChHHHHHHHHHhceeEEEE
Q psy15158 646 VAAPFGGFKQSGFGKDL-DINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 646 ~~~PFGG~k~SG~G~~~-G~~~~~~ftr~~~~ktV~i 681 (709)
+.+||||+|.||+|++. |.+.+.+|++ .|++..
T Consensus 474 ~~~pfGG~k~SG~G~~~~g~~~~~~f~~---~k~~~~ 507 (675)
T PRK11563 474 PQLVHGGPGRAGGGEELGGLRGVKHYMQ---RTAVQG 507 (675)
T ss_pred cCCCcCCCCCCCCCccccchhHHHHhhe---eeeeec
Confidence 46799999999999995 5788888888 466644
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-74 Score=644.71 Aligned_cols=394 Identities=35% Similarity=0.585 Sum_probs=362.1
Q ss_pred CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHH
Q psy15158 276 ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSI 355 (709)
Q Consensus 276 ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~ai 355 (709)
|++|++++.++.+++++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|||..++.. |+..++
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i 78 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR-AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAAI 78 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHH
Confidence 578999999999999999999999998 999999999999999999999999999999999999999999885 999999
Q ss_pred HHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHH-
Q psy15158 356 DTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTA- 434 (709)
Q Consensus 356 d~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta- 434 (709)
+.++|++..+.+..+...+. ..+...+.+++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~----~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~ 154 (443)
T cd07152 79 GELHEAAGLPTQPQGEILPS----APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGG 154 (443)
T ss_pred HHHHHHHHhHHHhCCccccc----cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHH
Confidence 99999998876655543332 1334567899999999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCC
Q psy15158 435 LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDY 514 (709)
Q Consensus 435 ~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dA 514 (709)
..+.++|.++|+|+|++|+++| +.++++.|+.||+++.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++||
T Consensus 155 ~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dA 232 (443)
T cd07152 155 VVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDA 232 (443)
T ss_pred HHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCC
Confidence 7899999999999999999998 46789999999999999999999999999998885 899999999999999999999
Q ss_pred CHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHH
Q psy15158 515 NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAK 579 (709)
Q Consensus 515 Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~ 579 (709)
|++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++ +++.+.+++.+++++++
T Consensus 233 dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 312 (443)
T cd07152 233 DLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSV 312 (443)
T ss_pred CHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999876 57889999999999999
Q ss_pred hcCCEEEECCccCC-----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHH
Q psy15158 580 SEGARLLIGGKRLD-----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVD 629 (709)
Q Consensus 580 ~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~ 629 (709)
.+|+++++||.... .+ | |++|||+++|+++|||+++|||+|.+++.++++
T Consensus 313 ~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 313 AAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred hCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 99999999875210 01 1 999999999999999999999999999999999
Q ss_pred hcCeeeEEEcCCCCCC-CCCCCCCCCCCCCC-CccChHHHHHHHHHhceeEEE
Q psy15158 630 KIDSGTVFINTYNKTD-VAAPFGGFKQSGFG-KDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 630 ~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G-~~~G~~~~~~ftr~~~~ktV~ 680 (709)
++++|+||||++...+ ..+||||+|.||+| +++|.++++.|++ .|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~---~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQ---WQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhc---eeEEe
Confidence 9999999999977665 47899999999999 8888999998988 56664
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-74 Score=644.01 Aligned_cols=401 Identities=42% Similarity=0.740 Sum_probs=372.3
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhH
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTH 350 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~e 350 (709)
+||+||+++++++.++.+++++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+||+..++...|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP-GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 69999999999999999999999999999998 99999999999999999999999999999999999999998886569
Q ss_pred HHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCc
Q psy15158 351 VGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430 (709)
Q Consensus 351 v~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~t 430 (709)
+..+++.++||+..+.+..+...+. +.+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~ 156 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQ----DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWT 156 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccC----CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcC
Confidence 9999999999999877755443332 234556788999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEE
Q psy15158 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510 (709)
Q Consensus 431 plta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV 510 (709)
|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||
T Consensus 157 p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV 235 (455)
T cd07093 157 PLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIV 235 (455)
T ss_pred cHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEE
Confidence 99999999999999999999999999878899999999999999999999999999999885 88999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHH
Q psy15158 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYC 575 (709)
Q Consensus 511 ~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i 575 (709)
++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++ +++.+.+++.+++
T Consensus 236 ~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 315 (455)
T cd07093 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYV 315 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 5688899999999
Q ss_pred HHHHhcCCEEEECCccCCC----CC---------------------------------CHHHHHHHHhcCCCCCeEEEEc
Q psy15158 576 EKAKSEGARLLIGGKRLDR----PG---------------------------------DVDAVIKRANSTEYGLASGIFT 618 (709)
Q Consensus 576 ~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dldeaI~~~N~t~yGLta~V~T 618 (709)
++++.+|+++++||...+. .+ |++|||+++|+++|||+++|||
T Consensus 316 ~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t 395 (455)
T cd07093 316 ELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWT 395 (455)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999999854211 01 9999999999999999999999
Q ss_pred cchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 619 ~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+|.++++++++++++|+|+||+....+..+||||+|.||+|+++|.+++..|++ .|+++
T Consensus 396 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~---~k~~~ 454 (455)
T cd07093 396 RDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTE---LKNVC 454 (455)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhc---eeEEe
Confidence 999999999999999999999988777788999999999999999999999988 46664
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=641.42 Aligned_cols=401 Identities=32% Similarity=0.515 Sum_probs=363.5
Q ss_pred eeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh
Q psy15158 269 ECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK 348 (709)
Q Consensus 269 ~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~ 348 (709)
+++||+||+++++++.++.+++++|+++|++ .|+++|.++|.++|++++++|++++++|++++++|+|||+.++..
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~----~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 77 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAAS----YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY 77 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 5789999999999999999999999999874 488899999999999999999999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHHHHHhhhCccccccCCC-CCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCC
Q psy15158 349 THVGMSIDTWKYFAGWCDKILGSTIPIAHAR-PNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427 (709)
Q Consensus 349 ~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs 427 (709)
|+..+++.++||+..+.+..++..+..... ..+...+..++|+|||++|+|||||++..+++++|||++||+||+|||
T Consensus 78 -ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps 156 (451)
T cd07146 78 -EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPS 156 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999999999998877765543322100 022346788999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc
Q psy15158 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507 (709)
Q Consensus 428 ~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp 507 (709)
+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.+.++ ++|+++|+|||||
T Consensus 157 ~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~p 233 (451)
T cd07146 157 EKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGNDP 233 (451)
T ss_pred CCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCce
Confidence 9999999999999999999999999999987889999999999999999999999999998764 6899999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLI 572 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~ 572 (709)
+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++ +++.+.+++.
T Consensus 234 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~ 313 (451)
T cd07146 234 LIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIE 313 (451)
T ss_pred EEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999886 5677899999
Q ss_pred HHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchH
Q psy15158 573 DYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDIN 622 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~ 622 (709)
+++++++.+|+++++||.... .+ | |+||||+++|+++|||+++|||+|.+
T Consensus 314 ~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 393 (451)
T cd07146 314 NRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLD 393 (451)
T ss_pred HHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 999999999999999884210 00 1 99999999999999999999999999
Q ss_pred HHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCC-CCccChHHHHHHHHHhceeEEE
Q psy15158 623 KAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGF-GKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 623 ~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~-G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
++.++++++++|+||||+..... ..+||||+|.||+ |+++|.+++++|++ .|+++
T Consensus 394 ~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~---~k~~~ 450 (451)
T cd07146 394 TIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTN---VKTYS 450 (451)
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhc---eeEEe
Confidence 99999999999999999865443 5689999999995 89999999999998 56664
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-73 Score=640.42 Aligned_cols=405 Identities=38% Similarity=0.633 Sum_probs=370.0
Q ss_pred eeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH
Q psy15158 268 MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347 (709)
Q Consensus 268 ~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~ 347 (709)
++++||+||+++++++.++.+++++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+||+..++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 79 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK-EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR 79 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH
Confidence 36789999999999999999999999999999998 99999999999999999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhCccccccCC-CCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeC
Q psy15158 348 KTHVGMSIDTWKYFAGWCDKILGSTIPIAHA-RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426 (709)
Q Consensus 348 ~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKP 426 (709)
. |+..+++.++|++..+.++.++..+.... ...+...+.+++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 80 ~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kp 158 (453)
T cd07149 80 K-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKP 158 (453)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 99999999999999887776654432210 011233578899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc
Q psy15158 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506 (709)
Q Consensus 427 s~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn 506 (709)
|+.+|+++.++.+++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++ ++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk~ 235 (453)
T cd07149 159 ASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSNA 235 (453)
T ss_pred CCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCCc
Confidence 99999999999999999999999999999977778999999999999999999999999999863 789999999999
Q ss_pred cEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHH
Q psy15158 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKL 571 (709)
Q Consensus 507 p~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i 571 (709)
|+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++ +++.+.+++
T Consensus 236 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 315 (453)
T cd07149 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERI 315 (453)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999886 578899999
Q ss_pred HHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccch
Q psy15158 572 IDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDI 621 (709)
Q Consensus 572 ~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~ 621 (709)
.+++++++.+|+++++||.... .+ | |++|||+++|+++|||+++|||+|.
T Consensus 316 ~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~ 395 (453)
T cd07149 316 EEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL 395 (453)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCH
Confidence 9999999999999999884211 00 1 8999999999999999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+++.++++++++|+||||+..... ..+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 396 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~---~k~~~ 452 (453)
T cd07149 396 QKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTE---IKLVC 452 (453)
T ss_pred HHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhc---eeEEe
Confidence 999999999999999999876543 568999999999999999999999988 46654
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-73 Score=637.74 Aligned_cols=379 Identities=38% Similarity=0.597 Sum_probs=351.1
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~ 369 (709)
+++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||+.++.. |+..+++.++||+..+++..
T Consensus 1 v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~ 78 (429)
T cd07100 1 IEAALDRAHAAFL-AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAFL 78 (429)
T ss_pred CHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 4789999999998 999999999999999999999999999999999999999999985 99999999999999988875
Q ss_pred Ccc-ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCC
Q psy15158 370 GST-IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPK 448 (709)
Q Consensus 370 g~~-~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~ 448 (709)
+.. .+. + +...+++++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 79 ~~~~~~~----~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~ 153 (429)
T cd07100 79 ADEPIET----D-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPE 153 (429)
T ss_pred CCeeccC----C-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCc
Confidence 432 221 1 2456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhh
Q psy15158 449 GVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVF 528 (709)
Q Consensus 449 gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf 528 (709)
|++|+++|++ +.+..|+.||+|+.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.++.++|
T Consensus 154 gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~ 231 (429)
T cd07100 154 GVFQNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL 231 (429)
T ss_pred CcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 9999999965 467899999999999999999999999999885 89999999999999999999999999999999999
Q ss_pred ccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC
Q psy15158 529 FNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593 (709)
Q Consensus 529 ~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~ 593 (709)
.|+||.|++++|||||++++|+|+++|+++++++ +++.+.+++.+++++++.+|+++++||...+
T Consensus 232 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 311 (429)
T cd07100 232 QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD 311 (429)
T ss_pred hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 9999999999999999999999999999999876 5789999999999999999999999986432
Q ss_pred CCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcC
Q psy15158 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINT 640 (709)
Q Consensus 594 ~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~ 640 (709)
..| |+||||+++|+++|||+++|||+|.++++++++++++|+|+||+
T Consensus 312 ~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 391 (429)
T cd07100 312 GPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING 391 (429)
T ss_pred CCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence 111 89999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 641 YNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 641 ~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+....+.+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 392 ~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~---~k~v~ 428 (429)
T cd07100 392 MVKSDPRLPFGGVKRSGYGRELGRFGIREFVN---IKTVW 428 (429)
T ss_pred CCCCCCCCCcCCccccccCCcchHHHHHHhcc---eeEEe
Confidence 88777789999999999999999999999988 56664
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=629.76 Aligned_cols=378 Identities=31% Similarity=0.459 Sum_probs=348.0
Q ss_pred hHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhh
Q psy15158 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368 (709)
Q Consensus 289 dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~ 368 (709)
++++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|||+.++.. |+..+++.++|++..+.+.
T Consensus 1 ~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~ 78 (431)
T cd07095 1 QVDAAVAAARAAFP-GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHER 78 (431)
T ss_pred CHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 57899999999998 999999999999999999999999999999999999999999985 9999999999999888777
Q ss_pred hCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCC
Q psy15158 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPK 448 (709)
Q Consensus 369 ~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~ 448 (709)
.+...+.. .+...++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 79 ~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~ 154 (431)
T cd07095 79 TGERATPM----AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPP 154 (431)
T ss_pred cCCcccCC----CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcCh
Confidence 65433211 23457889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhh
Q psy15158 449 GVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVF 528 (709)
Q Consensus 449 gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf 528 (709)
|++|+++|+ .+.++.|+.||+++.|.||||+++|+.|++.++.+.++++++|+|||||+||++|||++.|++.+++++|
T Consensus 155 g~~~~v~g~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~ 233 (431)
T cd07095 155 GVLNLVQGG-RETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF 233 (431)
T ss_pred hHheEEeCc-HHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH
Confidence 999999985 5689999999999999999999999999998876567999999999999999999999999999999999
Q ss_pred ccCCCcccCCcEEEEeCc-cHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccC
Q psy15158 529 FNKGENCISAGRIFVDSN-IYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592 (709)
Q Consensus 529 ~~~GQ~C~A~~rl~V~es-i~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~ 592 (709)
.|+||.|++++|+|||++ ++|+|+++|+++++++ ++..+.+++.+++++++.+|+++++||...
T Consensus 234 ~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~ 313 (431)
T cd07095 234 LTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERL 313 (431)
T ss_pred HhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcC
Confidence 999999999999999999 9999999999999987 578899999999999999999999998542
Q ss_pred CCCC--------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcC
Q psy15158 593 DRPG--------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINT 640 (709)
Q Consensus 593 ~~~g--------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~ 640 (709)
+..+ |++|||+++|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 314 ~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~ 393 (431)
T cd07095 314 VAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNR 393 (431)
T ss_pred CCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence 2111 99999999999999999999999999999999999999999998
Q ss_pred CCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHH
Q psy15158 641 YNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDK 673 (709)
Q Consensus 641 ~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~ 673 (709)
..... ..+||||+|.||+|+++|.+++++|..+
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 427 (431)
T cd07095 394 PTTGASSTAPFGGVGLSGNHRPSAYYAADYCAYP 427 (431)
T ss_pred CCCCCCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence 66544 4689999999999999999998877663
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-72 Score=630.92 Aligned_cols=399 Identities=25% Similarity=0.349 Sum_probs=357.3
Q ss_pred CCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHH
Q psy15158 284 MANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363 (709)
Q Consensus 284 ~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~ 363 (709)
.+..+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|+++++.|+|||+.++...|+..+++.++|++.
T Consensus 2 ~~~~~~v~~av~~a~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE-SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH-hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999998 999999999999999999999999999999999999999999965699999999999999
Q ss_pred HHHhhhCcc---ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHH
Q psy15158 364 WCDKILGST---IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440 (709)
Q Consensus 364 ~~~~~~g~~---~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~el 440 (709)
.+++..+.. .+.. . .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.++
T Consensus 81 ~~~~~~~~~~~~~~~~--~-~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~ 157 (484)
T PLN02203 81 NLKKWMAPKKAKLPLV--A-FPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAAN 157 (484)
T ss_pred HHHHHhccccccCCcc--c-CCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH
Confidence 888776532 1211 1 123568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcC---CCCHH
Q psy15158 441 SVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFD---DYNLD 517 (709)
Q Consensus 441 l~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~---dADle 517 (709)
+.++ +|+|++|+++| +.++++.|+.|+ ++.|+||||+++|+.|++.+++ +++|+++|+|||||+||++ |||++
T Consensus 158 ~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~ 233 (484)
T PLN02203 158 IPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTK 233 (484)
T ss_pred HHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHH
Confidence 9986 99999999998 678999999995 9999999999999999999885 8999999999999999997 69999
Q ss_pred HHHHHHHhhhhc-cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcC
Q psy15158 518 KAVRMSMGGVFF-NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEG 582 (709)
Q Consensus 518 ~Aa~~iv~saf~-~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~G 582 (709)
.|++.+++++|. |+||.|+|++|+|||++++|+|+++|++.++++ ++..+++++.+++++++.+
T Consensus 234 ~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~- 312 (484)
T PLN02203 234 VAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVA- 312 (484)
T ss_pred HHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhC-
Confidence 999999999996 899999999999999999999999999998876 6889999999999999887
Q ss_pred CEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHH
Q psy15158 583 ARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVD 629 (709)
Q Consensus 583 a~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~ 629 (709)
+++++||.... .| |++|||+++|+++|||+++|||+|.+++.++++
T Consensus 313 ~~~~~gg~~~~-~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~ 391 (484)
T PLN02203 313 ASIVHGGSIDE-KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILS 391 (484)
T ss_pred CeEEeCCCcCC-CCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 68999875311 11 899999999999999999999999999999999
Q ss_pred hcCeeeEEEcCCCCC--CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEecc-C-CCCCCCCCCC
Q psy15158 630 KIDSGTVFINTYNKT--DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTY-N-KTDVAAPFGG 695 (709)
Q Consensus 630 ~l~aG~V~VN~~~~~--~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~-~-~~~~~~Pf~g 695 (709)
++++|+|+||++... ...+||||+|+||+|+++|.+.+..|++ .|+++.+.. . ...-..||++
T Consensus 392 ~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~---~k~v~~~~~~~~~~~~~~p~~~ 458 (484)
T PLN02203 392 ETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSH---EKAVLRRSLLTEFEFRYPPWND 458 (484)
T ss_pred hCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcc---eeEEEEcCccCcccccCCCCCh
Confidence 999999999987543 3568999999999999999999999988 688887743 1 2223356654
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-72 Score=627.57 Aligned_cols=383 Identities=36% Similarity=0.573 Sum_probs=351.4
Q ss_pred hHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhh
Q psy15158 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368 (709)
Q Consensus 289 dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~ 368 (709)
|+++|+++|++||+ .|+++|.++|+++|++++++|++|+++|++++++|+|||..++.. |+..+++.++||+..+++.
T Consensus 1 ~v~~ai~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~ 78 (432)
T cd07105 1 DADQAVEAAAAAFP-AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQI 78 (432)
T ss_pred CHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 57899999999998 999999999999999999999999999999999999999888875 9999999999999988776
Q ss_pred hCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCC
Q psy15158 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPK 448 (709)
Q Consensus 369 ~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~ 448 (709)
.+...+.. . .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+
T Consensus 79 ~~~~~~~~--~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~ 155 (432)
T cd07105 79 IGGSIPSD--K-PGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPK 155 (432)
T ss_pred cCeecccC--C-CCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCC
Confidence 44433321 1 22346788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCC---chhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHh
Q psy15158 449 GVINILPGT---GAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG 525 (709)
Q Consensus 449 gvv~vv~g~---g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~ 525 (709)
|++|+++|+ +.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.++.
T Consensus 156 gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~ 234 (432)
T cd07105 156 GVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALF 234 (432)
T ss_pred CcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHH
Confidence 999999985 34689999999999999999999999999999885 89999999999999999999999999999999
Q ss_pred hhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-C
Q psy15158 526 GVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-R 594 (709)
Q Consensus 526 saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~ 594 (709)
++|.|+||.|++++|+|||++++|+|+++|+++++++ +++.+.+++.+++++++.+|+++++||.... .
T Consensus 235 ~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 314 (432)
T cd07105 235 GAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESP 314 (432)
T ss_pred HHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCC
Confidence 9999999999999999999999999999999999865 6889999999999999999999999986531 0
Q ss_pred CC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCC
Q psy15158 595 PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641 (709)
Q Consensus 595 ~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~ 641 (709)
.+ |.||||+++|+++|||+++|||+|.++++++++++++|+||||++
T Consensus 315 ~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~ 394 (432)
T cd07105 315 SGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGM 394 (432)
T ss_pred CCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCC
Confidence 11 899999999999999999999999999999999999999999998
Q ss_pred CCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 642 NKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 642 ~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
+... +.+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~---~k~v~ 431 (432)
T cd07105 395 TVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTE---TKWIT 431 (432)
T ss_pred CCCCCCCCCCCCcccccccccChHHHHHHhhc---eEEEe
Confidence 7554 578999999999999999999999988 57765
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-72 Score=626.07 Aligned_cols=377 Identities=24% Similarity=0.373 Sum_probs=340.9
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCc
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~ 371 (709)
+.+++|++||+ .|+++|..+|+++|++++++|++|+++|++++++|+|||+.++...|+..++++++||+..++++.+.
T Consensus 2 ~~v~~a~~a~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~ 80 (449)
T cd07136 2 SLVEKQRAFFK-TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKP 80 (449)
T ss_pred hHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 56889999998 99999999999999999999999999999999999999999997569999999999999998877654
Q ss_pred -cccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCc
Q psy15158 372 -TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450 (709)
Q Consensus 372 -~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gv 450 (709)
..+... ...+...++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 81 KRVKTPL-LNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CccCCcc-ccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 222110 012345678999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 451 v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~ 530 (709)
+|+++|+ .+.+..|+.|+ |+.|+||||+++|+.|++.+++ +++|+++|+|||||+||++|||++.|++.++.++|.|
T Consensus 159 ~~~v~g~-~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEGG-VEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeCC-hHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 9999984 56788899776 9999999999999999999885 7899999999999999999999999999999999999
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG 596 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g 596 (709)
+||.|+|++|+|||++++|+|+++|++.++++ +++.+.+++.++++++ ++++||.... .|
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~-~g 309 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDR-ET 309 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCC-CC
Confidence 99999999999999999999999999999886 5678899999998763 7888885421 11
Q ss_pred ---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCC
Q psy15158 597 ---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK 643 (709)
Q Consensus 597 ---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~ 643 (709)
|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+...
T Consensus 310 ~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~ 389 (449)
T cd07136 310 LYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIM 389 (449)
T ss_pred CEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 89999999999999999999999999999999999999999998765
Q ss_pred CC--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 644 TD--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 644 ~~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
.. ..+||||+|.||+|+++|.+++.+|++ .|+++++.
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k~v~~~~ 428 (449)
T cd07136 390 HLANPYLPFGGVGNSGMGSYHGKYSFDTFSH---KKSILKKS 428 (449)
T ss_pred cccCCCCCccCcCcccCCcccCHHHHHHhcc---ceEEEEcC
Confidence 43 578999999999999999999999988 68998884
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >KOG2455|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-73 Score=595.38 Aligned_cols=474 Identities=24% Similarity=0.358 Sum_probs=408.1
Q ss_pred hhcCceeccccccccchhhhhHHhHhhccCCCCCcchhhHHHHHHhhcccccCCCccceecCeEeeCCCCCeeeeecCCC
Q psy15158 196 ENLQITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPAN 275 (709)
Q Consensus 196 ~~~~~~~~ne~v~~~~~f~~f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~v~s~~~~~~~v~nP~t 275 (709)
+...++..|||++ .+..++.++.. ++.+.+.+......+| ++|||+.+.+.. .....+|++
T Consensus 22 ~~~~~~i~neP~~-------------~~~~~s~er~~--l~~A~~~~~~~~~evP--~vIg~~~v~t~~--~q~q~~P~~ 82 (561)
T KOG2455|consen 22 DKQPKKIANEPVL-------------EYRKISKERVD--LEKALKELQKRPLEVP--LVIGDKEVYTND--EQYQVCPHN 82 (561)
T ss_pred ccCCccccCCCcc-------------ccCCCCHHHHH--HHHHHHHHhcCceecc--EEECCeeeecCC--cccccCCch
Confidence 3444899999999 45454444443 3334444444444444 899999998753 366679999
Q ss_pred CC-eEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHhcCChHHHHHhhHHHH
Q psy15158 276 ES-TICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHVGM 353 (709)
Q Consensus 276 ge-~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~-~~~~eLa~l~~~e~Gk~~~~a~~~ev~~ 353 (709)
++ +++++.+|+.+++++||++|.+|++ .|..+|..+|.+|++|+||+++ +.+-+|....++.+||+..+|..+-..+
T Consensus 83 hq~~lA~~~yA~~k~ie~AIkaAl~a~~-~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~e 161 (561)
T KOG2455|consen 83 HQHVLAKVYYATKKQIEKAIKAALSAQK-TWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAE 161 (561)
T ss_pred hhhhhhheeeccHHHHHHHHHHHHhhcC-ccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 87 9999999999999999999999997 9999999999999999999999 6788888888999999999998766889
Q ss_pred HHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHH
Q psy15158 354 SIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433 (709)
Q Consensus 354 aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplt 433 (709)
.+|++||++.++.++...+.+.. .+.....+.+|.--|.|++|+||||.........+||| |||+|+||||..+.++
T Consensus 162 Lidf~R~na~ya~eL~~~qpi~~--~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~ls 238 (561)
T KOG2455|consen 162 LIDFFRFNAKYASELYAQQPISQ--TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALS 238 (561)
T ss_pred HHHHHHHhHHHHHHhhhcCCccc--cCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHH
Confidence 99999999999999887654432 22323344444444999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc-----CCCcEEEcCCCcccE
Q psy15158 434 ALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES-----NLKKVSLELGGKSPL 508 (709)
Q Consensus 434 a~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~-----~~k~v~lElGGknp~ 508 (709)
++.+.++|+|||+|+|++|+||++++.+++.++.+|++.++.||||+.+.+++++..+++ .++|++.|+||||..
T Consensus 239 sYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFH 318 (561)
T KOG2455|consen 239 SYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFH 318 (561)
T ss_pred HHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceE
Confidence 999999999999999999999999999999999999999999999999999999999874 579999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------------hcHHHHHHHH
Q psy15158 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------------NHKAHLDKLI 572 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------------~~~~~~~~i~ 572 (709)
+|+++||++.++...++|+|.++||.|+|++|+||++++|+.+.++|.++.+++ ++...++|+.
T Consensus 319 fVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~ 398 (561)
T KOG2455|consen 319 FVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLK 398 (561)
T ss_pred EeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999888776 7889999999
Q ss_pred HHHHHHHhc-CCEEEECCccCCCCC-----------------------------------CHHHHHHHH-hcCCCCCeEE
Q psy15158 573 DYCEKAKSE-GARLLIGGKRLDRPG-----------------------------------DVDAVIKRA-NSTEYGLASG 615 (709)
Q Consensus 573 ~~i~~a~~~-Ga~vl~GG~~~~~~g-----------------------------------dldeaI~~~-N~t~yGLta~ 615 (709)
++|+.+... ...+++||++.++.| +++|+++++ |.|+||||++
T Consensus 399 k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGa 478 (561)
T KOG2455|consen 399 KVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGA 478 (561)
T ss_pred HHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccc
Confidence 999998765 368999999887655 799999999 7899999999
Q ss_pred EEccchHHHHHHHHhcC--eeeEEEcCCCCCCC--CCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccCCCCCCC
Q psy15158 616 IFTSDINKAMYFVDKID--SGTVFINTYNKTDV--AAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKTDVAA 691 (709)
Q Consensus 616 V~T~d~~~a~~va~~l~--aG~V~VN~~~~~~~--~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~~~~~~~ 691 (709)
||++|.+.+.+..++|+ +||.|||+.+++++ .+||||.++||+..+.|++++. +|++....+..+....+++.|
T Consensus 479 iFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l--~RwtSp~~ikEt~~~l~d~~y 556 (561)
T KOG2455|consen 479 IFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYL--LRWTSPLSIKETFVPLTDVKY 556 (561)
T ss_pred cccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEE--EeecCcchhhhcccCCcccCc
Confidence 99999999999998776 99999999999987 6899999999999999888543 444333333333444678889
Q ss_pred CCC
Q psy15158 692 PFG 694 (709)
Q Consensus 692 Pf~ 694 (709)
|+|
T Consensus 557 p~~ 559 (561)
T KOG2455|consen 557 PSM 559 (561)
T ss_pred CCC
Confidence 986
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-71 Score=621.13 Aligned_cols=385 Identities=28% Similarity=0.358 Sum_probs=346.3
Q ss_pred CCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHH
Q psy15158 284 MANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363 (709)
Q Consensus 284 ~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~ 363 (709)
+.+.+|+++|+++|++||+ .|+.+|..+|+++|++++++|++|+++|++++++|+|||+.++...|+..+++.++||+.
T Consensus 1 ~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 1 YTPLDEIDSIHSRLRATFR-SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCCHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 3578999999999999998 999999999999999999999999999999999999999999875599999999999999
Q ss_pred HHHhhhCccccccCCC-CCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH
Q psy15158 364 WCDKILGSTIPIAHAR-PNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV 442 (709)
Q Consensus 364 ~~~~~~g~~~p~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~ 442 (709)
.++++.....+..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 8877654322211000 012346789999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHH
Q psy15158 443 RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRM 522 (709)
Q Consensus 443 eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~ 522 (709)
+ |+|+|++|+++|++.+++ .|+.|| ++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 699999999999776655 599999 9999999999999999998875 89999999999999999999999999999
Q ss_pred HHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEEC
Q psy15158 523 SMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIG 588 (709)
Q Consensus 523 iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~G 588 (709)
+++++|.++||.|+|++|||||++++|+|+++|++.++++ ++..+.+++.++++++ |+++++|
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g 312 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG 312 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence 9999999999999999999999999999999999999876 4788999999999887 7799999
Q ss_pred CccCCC-------------CC-------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeE
Q psy15158 589 GKRLDR-------------PG-------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTV 636 (709)
Q Consensus 589 G~~~~~-------------~g-------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V 636 (709)
|...+. +. |+||||+++|+++|||+++|||+|.+++.++++++++|+|
T Consensus 313 g~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v 392 (436)
T cd07135 313 GEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGV 392 (436)
T ss_pred CCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeE
Confidence 854210 00 8999999999999999999999999999999999999999
Q ss_pred EEcCCCCC--CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 637 FINTYNKT--DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 637 ~VN~~~~~--~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+.... .+.+||||+|.||+|+++|.++++.|++ .|++
T Consensus 393 ~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~k~i 434 (436)
T cd07135 393 VINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTH---ERTV 434 (436)
T ss_pred EECCccccccCCCCCcCCcCcccCCccccHhHHHHhcc---cccc
Confidence 99987654 3578999999999999999999999988 4554
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-71 Score=617.92 Aligned_cols=383 Identities=38% Similarity=0.644 Sum_probs=352.5
Q ss_pred hHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhh
Q psy15158 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368 (709)
Q Consensus 289 dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~ 368 (709)
|+++++++|++||+ .|+++|..+|.++|++++++|++++++|++++++|+||+..++.. |+..+++.++|++..+.+.
T Consensus 1 ~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~ 78 (431)
T cd07104 1 DVDRAYAAAAAAQK-AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRRP 78 (431)
T ss_pred CHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 58999999999998 999999999999999999999999999999999999999999885 9999999999999988776
Q ss_pred hCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHH-HHHHHHHHHHcCCC
Q psy15158 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT-ALKLAELSVRAGFP 447 (709)
Q Consensus 369 ~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplt-a~~l~ell~eAGlP 447 (709)
.+...+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++ +..+.+++.++|+|
T Consensus 79 ~~~~~~~~---~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP 155 (431)
T cd07104 79 EGEILPSD---VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLP 155 (431)
T ss_pred cCccccCC---CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCC
Confidence 65544322 123456789999999999999999999999999999999999999999999998 67899999999999
Q ss_pred CCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhh
Q psy15158 448 KGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGV 527 (709)
Q Consensus 448 ~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~sa 527 (709)
+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++
T Consensus 156 ~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~ 234 (431)
T cd07104 156 KGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGA 234 (431)
T ss_pred cccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 999999999888899999999999999999999999999999885 8999999999999999999999999999999999
Q ss_pred hccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccC
Q psy15158 528 FFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592 (709)
Q Consensus 528 f~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~ 592 (709)
|.|+||.|++++|||||++++|+|+++|++.++++ +++.+.+++.+++++++.+|+++++||...
T Consensus 235 ~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~~ 314 (431)
T cd07104 235 FLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYE 314 (431)
T ss_pred HhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 99999999999999999999999999999998876 578899999999999999999999988421
Q ss_pred C-----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCC
Q psy15158 593 D-----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642 (709)
Q Consensus 593 ~-----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~ 642 (709)
. .+ | |+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~ 394 (431)
T cd07104 315 GLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQT 394 (431)
T ss_pred CceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCC
Confidence 0 00 1 8999999999999999999999999999999999999999999987
Q ss_pred CCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 643 KTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 643 ~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
..+ +.+||||+|.||+|+++|.++++.|++ .|+++
T Consensus 395 ~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~---~k~~~ 430 (431)
T cd07104 395 VNDEPHVPFGGVKASGGGRFGGPASLEEFTE---WQWIT 430 (431)
T ss_pred CCCCCCCCCCCcccccCCccchHHHHHHhhc---eeEEe
Confidence 665 578999999999999999999999998 56664
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-71 Score=623.33 Aligned_cols=402 Identities=27% Similarity=0.382 Sum_probs=356.6
Q ss_pred CCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHH
Q psy15158 284 MANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363 (709)
Q Consensus 284 ~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~ 363 (709)
..+.+++++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||+..++...|+..+++.++|++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~-~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL-TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999998 999999999999999999999999999999999999999999876799999999999998
Q ss_pred HHHhhhCcc-ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH
Q psy15158 364 WCDKILGST-IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV 442 (709)
Q Consensus 364 ~~~~~~g~~-~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~ 442 (709)
..++..... .+....... ...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 82 HLDEYLKPEKVDTVGVFGP-GKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHhCCcccCCccccCC-CceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 887765432 111111111 346789999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHH
Q psy15158 443 RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRM 522 (709)
Q Consensus 443 eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~ 522 (709)
++ +|+|++++++| +.+++..|+.|| ++.|.||||+.+|+.|++++++ +++|+++|+|||||+||++|||++.|++.
T Consensus 161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 86 99999999998 567889999998 9999999999999999999885 89999999999999999999999999999
Q ss_pred HHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEEC
Q psy15158 523 SMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIG 588 (709)
Q Consensus 523 iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~G 588 (709)
+++++|.|+||.|+|++|+|||++++|+|+++|++.++++ ++.++.+++.+++++ +|+++++|
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~g 313 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYG 313 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEEC
Confidence 9999999999999999999999999999999999998876 578999999999963 68899999
Q ss_pred CccCCC-------------C----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeE
Q psy15158 589 GKRLDR-------------P----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTV 636 (709)
Q Consensus 589 G~~~~~-------------~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V 636 (709)
|..... + | |+||||+++|+++|||++||||+|.+.++++++++++|+|
T Consensus 314 G~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v 393 (493)
T PTZ00381 314 GEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAV 393 (493)
T ss_pred CCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceE
Confidence 854210 0 0 9999999999999999999999999999999999999999
Q ss_pred EEcCCCC--CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEecc---C-CCCCCCCCCCCc
Q psy15158 637 FINTYNK--TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTY---N-KTDVAAPFGGFK 697 (709)
Q Consensus 637 ~VN~~~~--~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~---~-~~~~~~Pf~g~k 697 (709)
+||+... ....+||||+|.||+|+++|.++++.|++ .|+++.+.. . ......||++.+
T Consensus 394 ~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~---~k~v~~~~~~~~~~~~~~~pp~~~~~ 457 (493)
T PTZ00381 394 VINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSH---PKPVLNKSTGNSFDLSLRYPPYTSFK 457 (493)
T ss_pred EECCccccccCCCCCCCCcCcccccccchHHHHHhccc---eeEEEEccccccCcccccCCCCChHH
Confidence 9998753 33578999999999999999999998988 689887751 1 223457775433
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=613.71 Aligned_cols=378 Identities=26% Similarity=0.379 Sum_probs=340.4
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCc
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~ 371 (709)
+|+++|++||. .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++||+..+.+..+.
T Consensus 3 ~a~~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~ 81 (432)
T cd07137 3 RLVRELRETFR-SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAP 81 (432)
T ss_pred HHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 58999999998 99999999999999999999999999999999999999999886569999999999999988765543
Q ss_pred cc-cccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCc
Q psy15158 372 TI-PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450 (709)
Q Consensus 372 ~~-p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gv 450 (709)
.. +..... .....+++++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 82 ~~~~~~~~~-~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 82 EKVKTPLTT-FPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred cccCCCccc-CCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 11 111101 1124578899999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhh-c
Q psy15158 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVF-F 529 (709)
Q Consensus 451 v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf-~ 529 (709)
+|+++| +.+.++.|+.| +++.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.++.++| .
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999999 45688899987 59999999999999999999875 89999999999999999999999999999999999 5
Q ss_pred cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCC
Q psy15158 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP 595 (709)
Q Consensus 530 ~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~ 595 (709)
|+||.|+|++|+|||++++|+|+++|+++++++ +++.+.+++.++++++.. |+++++||.... .
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~~-~ 314 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERDE-K 314 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcCC-C
Confidence 999999999999999999999999999988876 578999999999999998 889999885321 0
Q ss_pred C---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCC
Q psy15158 596 G---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642 (709)
Q Consensus 596 g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~ 642 (709)
| |+||||+++|+++|||+++|||+|.+++.++++++++|+||||+..
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 394 (432)
T cd07137 315 NLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTV 394 (432)
T ss_pred CCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcc
Confidence 1 9999999999999999999999999999999999999999999876
Q ss_pred CCC--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 643 KTD--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 643 ~~~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
... ..+||||+|.||+|+++|.+.+++|++ .|+++
T Consensus 395 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~---~k~v~ 431 (432)
T cd07137 395 VQYAIDTLPFGGVGESGFGAYHGKFSFDAFSH---KKAVL 431 (432)
T ss_pred ccccCCCCCCCCcCcCcCCccccHHHHHHhcc---Cceee
Confidence 543 578999999999999999999999988 45553
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=614.85 Aligned_cols=380 Identities=30% Similarity=0.386 Sum_probs=341.1
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCh-HHHHHhhHHHHHHHHHHHHHHHHHhhhC
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAV-YTLALKTHVGMSIDTWKYFAGWCDKILG 370 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~-~~~a~~~ev~~aid~lr~~a~~~~~~~g 370 (709)
..+++|++||+ .|+++|+.+|+++|++++++|++|+++|++++++|+||+ ..++...|+..+++.++||+..+.+..+
T Consensus 2 ~~~~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 80 (434)
T cd07133 2 ALLERQKAAFL-ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMK 80 (434)
T ss_pred hHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35788999998 999999999999999999999999999999999999985 5676546999999999999998877654
Q ss_pred ccc-cccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCC
Q psy15158 371 STI-PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449 (709)
Q Consensus 371 ~~~-p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~g 449 (709)
... +.....+ +...+++++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..++++++++ +|+|
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g 158 (434)
T cd07133 81 PSRRHVGLLFL-PAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDED 158 (434)
T ss_pred CcccCCccccC-CCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcC
Confidence 432 1110011 234678999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred cEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhc
Q psy15158 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529 (709)
Q Consensus 450 vv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~ 529 (709)
++|+++|+ .++++.|+.|+ ++.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 159 ~~~~v~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~ 235 (434)
T cd07133 159 EVAVVTGG-ADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL 235 (434)
T ss_pred eEEEEeCC-hHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence 99999984 56888899776 9999999999999999999885 899999999999999999999999999999999999
Q ss_pred cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC--C
Q psy15158 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--R 594 (709)
Q Consensus 530 ~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--~ 594 (709)
|+||.|+|++|||||++++|+|+++|+++++++ +++.+.+++.+++++++.+|+++++||.... .
T Consensus 236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~ 315 (434)
T cd07133 236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFA 315 (434)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCC
Confidence 999999999999999999999999999999865 6888999999999999999999999885421 0
Q ss_pred CC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCC
Q psy15158 595 PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641 (709)
Q Consensus 595 ~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~ 641 (709)
.| |+||||+++|+++|||+++|||+|.+++.++++++++|+||||++
T Consensus 316 ~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~ 395 (434)
T cd07133 316 ATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDT 395 (434)
T ss_pred CCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 11 899999999999999999999999999999999999999999987
Q ss_pred CCC--CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 642 NKT--DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 642 ~~~--~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
... ++.+||||+|.||+|+++|.+++++|++ .|+++
T Consensus 396 ~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~---~k~v~ 433 (434)
T cd07133 396 LLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSH---AKPVF 433 (434)
T ss_pred ccccCCCCCCcCCCCcccCCCcCCHHHHHHhcc---cceec
Confidence 643 3578999999999999999999999988 46653
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-71 Score=610.09 Aligned_cols=358 Identities=32% Similarity=0.578 Sum_probs=330.7
Q ss_pred HHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEE
Q psy15158 317 MFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCG 396 (709)
Q Consensus 317 L~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~ 396 (709)
|++++++|++|+++|++++++|+|||+.++.. |+..+++.++||+.+++...+...+.. ..+...+++++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD---RPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccCCC---CCCceeEEEEecccEEE
Confidence 57899999999999999999999999999985 999999999999999888766443221 11234678899999999
Q ss_pred EECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEE
Q psy15158 397 LITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGF 476 (709)
Q Consensus 397 ~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~F 476 (709)
+|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|.|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999987889999999999999999
Q ss_pred cCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHH
Q psy15158 477 TGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV 556 (709)
Q Consensus 477 TGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~ 556 (709)
|||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|+|||++++|+|+++|+
T Consensus 157 tGs~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~ 235 (409)
T PRK10090 157 TGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLG 235 (409)
T ss_pred ECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence 9999999999998885 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh----------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC------------------------
Q psy15158 557 TEVKKM----------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------------ 596 (709)
Q Consensus 557 ~~~~~l----------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g------------------------ 596 (709)
+.++++ +++.+++++.+++++++.+|+++++||...+..|
T Consensus 236 ~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg 315 (409)
T PRK10090 236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG 315 (409)
T ss_pred HHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCC
Confidence 999876 4678999999999999999999999986532111
Q ss_pred ---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHH
Q psy15158 597 ---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKA 667 (709)
Q Consensus 597 ---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~ 667 (709)
|++|||+++|+++|||+++|||+|.+.+.++++++++|+||||+....+...||||+|.||+|+++|.+++
T Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl 395 (409)
T PRK10090 316 PVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGL 395 (409)
T ss_pred ceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHH
Confidence 89999999999999999999999999999999999999999999887777789999999999999999999
Q ss_pred HHHHHHhceeEEEEe
Q psy15158 668 MYFVDKIDSGTVFIN 682 (709)
Q Consensus 668 ~~ftr~~~~ktV~iN 682 (709)
+.|++ .|+++++
T Consensus 396 ~~f~~---~k~v~~~ 407 (409)
T PRK10090 396 HEYLQ---TQVVYLQ 407 (409)
T ss_pred HHhcc---eEEEEEe
Confidence 99988 6888765
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-69 Score=602.10 Aligned_cols=380 Identities=27% Similarity=0.401 Sum_probs=342.5
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCc
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~ 371 (709)
+++++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+|||+.++...|+..+++.++|++..+.+..+.
T Consensus 2 ~~~~~a~~a~~-~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~ 80 (433)
T cd07134 2 RVFAAQQAHAL-ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKP 80 (433)
T ss_pred hHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 57889999998 99999999999999999999999999999999999999999986559999999999999887654432
Q ss_pred -cccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCc
Q psy15158 372 -TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450 (709)
Q Consensus 372 -~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gv 450 (709)
..+.+... .+...++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 81 KRVRTPLLL-FGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred cccCCcccc-CCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 12111111 1334689999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 451 v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~ 530 (709)
+++++|+ .+.+..|+.|| ++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.++.++|.+
T Consensus 159 v~~v~g~-~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEGD-AEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeCC-hhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 9999995 57889999998 9999999999999999999885 7899999999999999999999999999999999999
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR 594 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~ 594 (709)
+||.|++++|||||++++|+|+++|+++++++ +++.+.+++.+++++++.+|+++++||.....
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~ 315 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAA 315 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCC
Confidence 99999999999999999999999999988865 45788999999999999999999999853210
Q ss_pred -------------C----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCC
Q psy15158 595 -------------P----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642 (709)
Q Consensus 595 -------------~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~ 642 (709)
+ | |+||+|+++|+++|||+++|||+|.+.+.++++++++|+||||+.+
T Consensus 316 g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 395 (433)
T cd07134 316 QRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVV 395 (433)
T ss_pred CCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 0 0 8999999999999999999999999999999999999999999876
Q ss_pred CCC--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 643 KTD--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 643 ~~~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
.+. +.+||||+|+||+|+++|.+++.+|++ .|+++
T Consensus 396 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~---~k~i~ 432 (433)
T cd07134 396 LHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSH---ERAVL 432 (433)
T ss_pred cccCCCCCCCCCcCcccCCCcCcHHHHHHhcc---cceee
Confidence 543 568999999999999999999999988 46653
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-69 Score=602.33 Aligned_cols=379 Identities=26% Similarity=0.368 Sum_probs=337.6
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCc
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~ 371 (709)
+|+++|++||+ .|+.+|..+|+++|++++++|++|+++|++++++|+|||+.++...|+..+++.++|++..++++.+.
T Consensus 2 ~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~ 80 (443)
T cd07132 2 EAVRRAREAFS-SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKP 80 (443)
T ss_pred hHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 58999999998 99999999999999999999999999999999999999999987569999999999999988877543
Q ss_pred cccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcE
Q psy15158 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVI 451 (709)
Q Consensus 372 ~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv 451 (709)
..+...........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~ 159 (443)
T cd07132 81 EPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECY 159 (443)
T ss_pred ccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeE
Confidence 3221110111234678899999999999999999999999999999999999999999999999999999985 999999
Q ss_pred EEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccC
Q psy15158 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNK 531 (709)
Q Consensus 452 ~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~ 531 (709)
|+++|++. .+..|+. ++|+.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.++.++|.++
T Consensus 160 ~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~ 236 (443)
T cd07132 160 PVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236 (443)
T ss_pred EEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcC
Confidence 99999654 4566775 589999999999999999998875 89999999999999999999999999999999999999
Q ss_pred CCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC---
Q psy15158 532 GENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--- 594 (709)
Q Consensus 532 GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--- 594 (709)
||.|+|++|||||++++|+|+++|++.++++ +++.+.+++.++++. +++++||.....
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~~~~~ 311 (443)
T cd07132 237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDEKERY 311 (443)
T ss_pred CCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCCCCCE
Confidence 9999999999999999999999999988765 578889999998863 488888754210
Q ss_pred ----------CC-------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC
Q psy15158 595 ----------PG-------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD 645 (709)
Q Consensus 595 ----------~g-------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~ 645 (709)
+. |++|||+++|+++|||+++|||+|.+++.++++++++|+||||++....
T Consensus 312 ~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~ 391 (443)
T cd07132 312 IAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHY 391 (443)
T ss_pred EeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 00 8999999999999999999999999999999999999999999876554
Q ss_pred --CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 646 --VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 646 --~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
..+||||+|.||+|+++|.++++.|++ .|+++++.
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~---~k~v~~~~ 428 (443)
T cd07132 392 TLDSLPFGGVGNSGMGAYHGKYSFDTFSH---KRSCLVKS 428 (443)
T ss_pred CCCCCCCCCCCcccCCCcccHHHHHHhcc---ccEEEEcc
Confidence 468999999999999999999999999 58887774
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-68 Score=594.45 Aligned_cols=374 Identities=29% Similarity=0.406 Sum_probs=334.9
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCc
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~ 371 (709)
+|+++|++||+ .|+.+|..+|+++|++++++|++|+++|++++++|+|||+.++...|+..+++.++|++..+++..+.
T Consensus 2 ~~v~~a~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~ 80 (426)
T cd07087 2 ELVARLRETFL-TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKP 80 (426)
T ss_pred hHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 48999999998 99999999999999999999999999999999999999987776569999999999999988766543
Q ss_pred c-ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCc
Q psy15158 372 T-IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450 (709)
Q Consensus 372 ~-~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gv 450 (709)
. .......+ +...+.+++|+|||++|+|||||+...+++++|||++||+||+|||+.+|+++..+++++.+ |+|+|+
T Consensus 81 ~~~~~~~~~~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 81 RRVSVPLLLQ-PAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred cccCCccccC-CCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 2 11111011 23467889999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 451 v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~ 530 (709)
+|+++|++ +.+..|+.|| ++.|.||||+++|+.|.+.++. +++|+++|+|||||+||++|||++.|++.++.++|.+
T Consensus 159 ~~vv~g~~-~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGGV-EVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCCc-hHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99999854 5689999999 9999999999999999999885 7899999999999999999999999999999999999
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC---
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--- 593 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--- 593 (709)
+||.|++++|||||++++|+|+++|++.++++ ++..+.+++.++++++ ++++||....
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~~g~ 310 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDKEER 310 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCCCCC
Confidence 99999999999999999999999999999876 5778899999998764 7888774311
Q ss_pred ----------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC
Q psy15158 594 ----------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT 644 (709)
Q Consensus 594 ----------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~ 644 (709)
.+ | |++|||+++|+++|||+++|||+|.+++.++++++++|+||||+....
T Consensus 311 ~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 390 (426)
T cd07087 311 YIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLH 390 (426)
T ss_pred EEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccc
Confidence 00 1 899999999999999999999999999999999999999999987643
Q ss_pred C--CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 645 D--VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 645 ~--~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
. +.+||||+|.||+|+++|.+.+..|++ .|++
T Consensus 391 ~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~---~k~~ 424 (426)
T cd07087 391 AAIPNLPFGGVGNSGMGAYHGKAGFDTFSH---LKSV 424 (426)
T ss_pred cCCCCCCCCCCCcccCCCccCHHHHHHhcc---ceee
Confidence 3 578999999999999999999999988 4555
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-68 Score=596.54 Aligned_cols=381 Identities=24% Similarity=0.316 Sum_probs=338.3
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~ 369 (709)
+++|+++|++||+ .|+++|..+|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++|++..+++..
T Consensus 1 v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~-ev~~~~~~l~~~a~~~~~~~ 78 (454)
T cd07129 1 VDAAAAAAAAAFE-SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQG-ELGRTTGQLRLFADLVREGS 78 (454)
T ss_pred ChHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHH-HHHHHHHHHHHHHHHHHhcC
Confidence 4789999999998 999999999999999999999999999999999999999998874 99999999999998876532
Q ss_pred --CccccccCCC---CCCCceeeeecccCEEEEECCCCchHHH--HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH
Q psy15158 370 --GSTIPIAHAR---PNSNFTFTKREPIGVCGLITPWNYPLMM--LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV 442 (709)
Q Consensus 370 --g~~~p~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfPl~~--~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~ 442 (709)
+...+..... ..+...+++++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|+++.++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~ 158 (454)
T cd07129 79 WLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIR 158 (454)
T ss_pred CccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHH
Confidence 2221111000 0112347889999999999999999988 55899999999999999999999999999988764
Q ss_pred ----HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc-CCCcEEEcCCCcccEEEcCCC---
Q psy15158 443 ----RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES-NLKKVSLELGGKSPLVIFDDY--- 514 (709)
Q Consensus 443 ----eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~-~~k~v~lElGGknp~IV~~dA--- 514 (709)
++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++ +++|+++|+|||||+||++||
T Consensus 159 ~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~ 238 (454)
T cd07129 159 AALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAE 238 (454)
T ss_pred HHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchH
Confidence 899999999999997777999999999999999999999999999998863 689999999999999999999
Q ss_pred CHHHHHHHHHhhhhccCCCcccCCcEEEEeCc-cHHHHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHhc-CCEEEE
Q psy15158 515 NLDKAVRMSMGGVFFNKGENCISAGRIFVDSN-IYDAFLEKVVTEVKKM-----NHKAHLDKLIDYCEKAKSE-GARLLI 587 (709)
Q Consensus 515 Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~es-i~d~fl~~L~~~~~~l-----~~~~~~~~i~~~i~~a~~~-Ga~vl~ 587 (709)
|++.|++.+++++|.|+||.|+|++|+|||++ ++|+|+++|+++++++ +++.+.+++.+++++++++ |+++++
T Consensus 239 dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~a~~~~ga~~l~ 318 (454)
T cd07129 239 RGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAAPGVRVLA 318 (454)
T ss_pred HHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHHHHhcCCcEEEe
Confidence 89999999999999999999999999999999 9999999999999988 5777778888999999998 999999
Q ss_pred CCccC-------------CC---CC-------------------CHHHHHHHHhcCCCCCeEEEEccc--hHHHHHHHHh
Q psy15158 588 GGKRL-------------DR---PG-------------------DVDAVIKRANSTEYGLASGIFTSD--INKAMYFVDK 630 (709)
Q Consensus 588 GG~~~-------------~~---~g-------------------dldeaI~~~N~t~yGLta~V~T~d--~~~a~~va~~ 630 (709)
||... .. +. |+||+|+++|+++|||+++|||+| .+.+++++++
T Consensus 319 gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~ 398 (454)
T cd07129 319 GGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPV 398 (454)
T ss_pred CCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHH
Confidence 98531 11 11 899999999999999999999999 7999999999
Q ss_pred c--CeeeEEEcCCCCCC---CCCCCCC-CCCCCCCCc--cChHHHHHHHH
Q psy15158 631 I--DSGTVFINTYNKTD---VAAPFGG-FKQSGFGKD--LDINKAMYFVD 672 (709)
Q Consensus 631 l--~aG~V~VN~~~~~~---~~~PFGG-~k~SG~G~~--~G~~~~~~ftr 672 (709)
| ++|+||||+++.+. +.+|||| +|.||+|++ .|.+.+++|++
T Consensus 399 l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~ 448 (454)
T cd07129 399 LERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLR 448 (454)
T ss_pred HHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcc
Confidence 9 69999999876554 3789999 999999998 78888888887
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-66 Score=587.66 Aligned_cols=377 Identities=20% Similarity=0.288 Sum_probs=326.9
Q ss_pred ecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHh--
Q psy15158 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALK-- 348 (709)
Q Consensus 271 ~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~-- 348 (709)
+||+|++++++++.++. ++|+++|++||+ .|+++|+.+|.++|++++++|++|.+||++++++|+|||+.++..
T Consensus 70 ~~P~t~~~~~~~~~~~~---~~av~aA~~A~~-~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g 145 (551)
T TIGR02288 70 RSPYGVELGVTYPQCDG---DALLDAAHAALP-GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG 145 (551)
T ss_pred cCCCCCCEEEEEcCCCH---HHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence 59999999999999995 899999999998 999999999999999999999999999999999999999988741
Q ss_pred --hHHHHHHHHHHHHHHHHHhhhCccc---cccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEE
Q psy15158 349 --THVGMSIDTWKYFAGWCDKILGSTI---PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423 (709)
Q Consensus 349 --~ev~~aid~lr~~a~~~~~~~g~~~---p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVV 423 (709)
.++.+.++.++|+++.+.++.+... |.....+.....+..++|+|||++|+|||||+++..++++|||++||+||
T Consensus 146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV 225 (551)
T TIGR02288 146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL 225 (551)
T ss_pred ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence 1567789999999999888776543 21100111112234789999999999999999999999999999999999
Q ss_pred eeCCCCchHHHH----HHHHHHHHcCCCCCcEEEecCC-chhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcE
Q psy15158 424 MKPSEVSPLTAL----KLAELSVRAGFPKGVINILPGT-GAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKV 498 (709)
Q Consensus 424 lKPs~~tplta~----~l~ell~eAGlP~gvv~vv~g~-g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v 498 (709)
+|||+.+|+++. .+.+++.++|+|+|++|+|+|+ +.++++.|+.||+|++|.||||+++|+.|++.++ .+++
T Consensus 226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa---~~~v 302 (551)
T TIGR02288 226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR---QAQV 302 (551)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc---cCcE
Confidence 999999999765 5679999999999999999985 6789999999999999999999999999999876 3789
Q ss_pred EEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCc---------cHHHHHHHHHHHHHhh-------
Q psy15158 499 SLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN---------IYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 499 ~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~es---------i~d~fl~~L~~~~~~l------- 562 (709)
++|+|||||+||++|||++.+++.++.|+|.|+||+|++++|+|||++ +||+|+++|+++++++
T Consensus 303 ~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~lvGdp~~~ 382 (551)
T TIGR02288 303 YTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARA 382 (551)
T ss_pred EeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHhcCCcccc
Confidence 999999999999999999999999999999999999999999999999 7999999999999886
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC---CCC----------------------------------CH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD---RPG----------------------------------DV 598 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~---~~g----------------------------------dl 598 (709)
++..+++++ ++++++| ++++||.... .+| |+
T Consensus 383 ~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~ 457 (551)
T TIGR02288 383 TAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDG 457 (551)
T ss_pred cccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCH
Confidence 566777774 5666677 5666553210 001 89
Q ss_pred HHHHHHHhcC--CCC-CeEEEEccchHHHHHHHHhc----------CeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChH
Q psy15158 599 DAVIKRANST--EYG-LASGIFTSDINKAMYFVDKI----------DSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDIN 665 (709)
Q Consensus 599 deaI~~~N~t--~yG-Lta~V~T~d~~~a~~va~~l----------~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~ 665 (709)
||||+++|++ +|| |+++|||+|.+++.++.+++ ++|.||||+. .||++++.||+.+++|..
T Consensus 458 deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n~~a~~~ 531 (551)
T TIGR02288 458 AHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGNPAANAS 531 (551)
T ss_pred HHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCCCccCCc
Confidence 9999999998 667 99999999999999999998 6777777763 479999999999988754
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-67 Score=584.21 Aligned_cols=357 Identities=20% Similarity=0.240 Sum_probs=312.5
Q ss_pred hhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHh
Q psy15158 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367 (709)
Q Consensus 288 ~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~ 367 (709)
+|+++|+++|++||+ .|+++|.++|.++|++++++|++|.++|++++++|+|||+.++. ++.++|++...
T Consensus 4 ~~v~~av~~A~~A~~-~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~-- 73 (429)
T cd07121 4 ATVDDAVAAAKAAQK-QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT-- 73 (429)
T ss_pred hhHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc--
Confidence 689999999999998 99999999999999999999999999999999999999986542 55677776532
Q ss_pred hhCcc-c-cccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH---
Q psy15158 368 ILGST-I-PIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV--- 442 (709)
Q Consensus 368 ~~g~~-~-p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~--- 442 (709)
.+.. . +..... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.||+++..+++++.
T Consensus 74 -~~~~~~~~~~~~~-~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~ 151 (429)
T cd07121 74 -PGTEDLTTTAWSG-DNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAI 151 (429)
T ss_pred -CcccccccccccC-CCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHH
Confidence 1211 1 110011 12345788899999999999999999999999999999999999999999999999999874
Q ss_pred -HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHH
Q psy15158 443 -RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVR 521 (709)
Q Consensus 443 -eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~ 521 (709)
++|+|+|++|+++|++.+.++.|+.||+|+.|+||||+++|+.|++. .+|+++|+|||||+||++|||++.|++
T Consensus 152 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~ 226 (429)
T cd07121 152 AEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAAR 226 (429)
T ss_pred HHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHH
Confidence 78999999999999777889999999999999999999999999874 489999999999999999999999999
Q ss_pred HHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhc--CCEEEECCcc--------
Q psy15158 522 MSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSE--GARLLIGGKR-------- 591 (709)
Q Consensus 522 ~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~--Ga~vl~GG~~-------- 591 (709)
.+++++|.|+||.|+|.+|+|||+++||+|+++|+++...+++..+.+++.++++++.+. |+++++||..
T Consensus 227 ~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G 306 (429)
T cd07121 227 DIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRNGAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAG 306 (429)
T ss_pred HHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHCCCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcC
Confidence 999999999999999999999999999999999999843348999999999999988864 5788877632
Q ss_pred --CC----------CC----------C---------CHHHHHHHHhcCCCCC--eEEEEccchHHHHHHHHhcCeeeEEE
Q psy15158 592 --LD----------RP----------G---------DVDAVIKRANSTEYGL--ASGIFTSDINKAMYFVDKIDSGTVFI 638 (709)
Q Consensus 592 --~~----------~~----------g---------dldeaI~~~N~t~yGL--ta~V~T~d~~~a~~va~~l~aG~V~V 638 (709)
.+ .+ | |+||||+++|+++||| +++|||+|.++++++++++++|+|||
T Consensus 307 ~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~i 386 (429)
T cd07121 307 IEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVK 386 (429)
T ss_pred CCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEE
Confidence 00 00 0 9999999999999999 99999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCC--CCccC
Q psy15158 639 NTYNKTDVAAPFGGFKQSGF--GKDLD 663 (709)
Q Consensus 639 N~~~~~~~~~PFGG~k~SG~--G~~~G 663 (709)
|+... ..+||||+|.|++ |.+-|
T Consensus 387 N~~~~--~~~p~gG~k~s~~~~~~~~~ 411 (429)
T cd07121 387 NGPSY--AGLGVGGEGYTTFTIAGPTG 411 (429)
T ss_pred cCCCc--CccccCCCccceEEecCCcC
Confidence 97644 5689999999999 65444
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-65 Score=572.89 Aligned_cols=374 Identities=18% Similarity=0.198 Sum_probs=330.7
Q ss_pred HHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh-
Q psy15158 291 DIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL- 369 (709)
Q Consensus 291 ~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~- 369 (709)
++|+++|++||+ .|+++|.++|+++|++++++|++|+++|+.++++|+|||+ ++. .|+..+++.++||+..+..+.
T Consensus 2 ~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~ 78 (442)
T cd07084 2 ERALLAADISTK-AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRI 78 (442)
T ss_pred hHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhccc
Confidence 689999999998 9999999999999999999999999999999999999999 555 499999999999999886542
Q ss_pred -CccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCC-C
Q psy15158 370 -GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGF-P 447 (709)
Q Consensus 370 -g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGl-P 447 (709)
+...... ........+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+ |
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 79 PHEPGNHL-GQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred cccccccC-CCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 2111000 000123467899999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCC-CHHHHHHHHHhh
Q psy15158 448 KGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGG 526 (709)
Q Consensus 448 ~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dA-Dle~Aa~~iv~s 526 (709)
+|++++++|++. ++..|+.||+++.|.||||+++|+.|++.++. +|+++|+|||||+||++|| |++.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999876 89999999999999999999999999998763 8999999999999999999 699999999999
Q ss_pred hhccCCCcccCCcEEEEeCc-cHHHHHHHHHHHHHhh------hcHHHHHHHHHHHHHHHhcC-CEEEECCccCC-----
Q psy15158 527 VFFNKGENCISAGRIFVDSN-IYDAFLEKVVTEVKKM------NHKAHLDKLIDYCEKAKSEG-ARLLIGGKRLD----- 593 (709)
Q Consensus 527 af~~~GQ~C~A~~rl~V~es-i~d~fl~~L~~~~~~l------~~~~~~~~i~~~i~~a~~~G-a~vl~GG~~~~----- 593 (709)
+|.|+||.|++++|||||++ ++|+|+++|++.++++ ..+-+.+++.++++++.++| +++++||...+
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~gg~~~~~~~~~ 313 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIP 313 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeCCcccccCCCC
Confidence 99999999999999999999 9999999999999887 34556678888999999884 89999885310
Q ss_pred -----------------CC---C-----------------C--HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhc-Ce
Q psy15158 594 -----------------RP---G-----------------D--VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKI-DS 633 (709)
Q Consensus 594 -----------------~~---g-----------------d--ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l-~a 633 (709)
.. . | ++|+|+++|+++|||+++|||+|.+.++++++++ ++
T Consensus 314 ~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~ 393 (442)
T cd07084 314 SIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVA 393 (442)
T ss_pred CcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhc
Confidence 00 1 6 9999999999999999999999999999999999 99
Q ss_pred eeEEEcCC-CCCC-CCCCCCC-CCCCCCCCcc-ChHHHHHHHH
Q psy15158 634 GTVFINTY-NKTD-VAAPFGG-FKQSGFGKDL-DINKAMYFVD 672 (709)
Q Consensus 634 G~V~VN~~-~~~~-~~~PFGG-~k~SG~G~~~-G~~~~~~ftr 672 (709)
|+||||.. +.+. +..|||| .|.||+|++. |.+.+.+|++
T Consensus 394 G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~ 436 (442)
T cd07084 394 GRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWR 436 (442)
T ss_pred CeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheee
Confidence 99999976 3433 4567766 8899999997 8787777877
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-65 Score=578.30 Aligned_cols=390 Identities=18% Similarity=0.267 Sum_probs=336.1
Q ss_pred CCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q psy15158 262 SVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGA 341 (709)
Q Consensus 262 s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk 341 (709)
+.++...+++||+|++++++++.+ |+++|+++|++|++ .|+++|+.+|.++|++++++|++++++|+.++++|+||
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~-~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk 136 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP-GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQ 136 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCC
Confidence 345678999999999999999988 89999999999998 99999999999999999999999999999999999999
Q ss_pred hHHHHHh----hHHHHHHHHHHHHHHHHHhhhCcccccc-CCC--CCCCceeeeecccCEEEEECCCCchHHHHHHHHHH
Q psy15158 342 VYTLALK----THVGMSIDTWKYFAGWCDKILGSTIPIA-HAR--PNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAP 414 (709)
Q Consensus 342 ~~~~a~~----~ev~~aid~lr~~a~~~~~~~g~~~p~~-~~~--~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iap 414 (709)
++.++.. .|+..+++.++|+++.+.++.+...... ... +-.......++|+||+++|+|||||++....++++
T Consensus 137 ~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ 216 (549)
T cd07127 137 AFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFA 216 (549)
T ss_pred CHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHH
Confidence 9987752 2799999999999998887765422110 001 11112234789999999999999999999999999
Q ss_pred HHHcCCEEEeeCCCCchHHHH----HHHHHHHHcCCCCCcEEEecCC-chhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 415 CLAAGNTVVMKPSEVSPLTAL----KLAELSVRAGFPKGVINILPGT-GAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 415 ALaaGNtVVlKPs~~tplta~----~l~ell~eAGlP~gvv~vv~g~-g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
||++||+||+|||+.+|+++. .+.++|.++|+|+|+||+++|+ +.++++.|+.||+|++|.||||+.+|+.|++.
T Consensus 217 ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~ 296 (549)
T cd07127 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEAN 296 (549)
T ss_pred HHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999865 4568999999999999999985 46799999999999999999999999999998
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCc---------cHHHHHHHHHHHHH
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN---------IYDAFLEKVVTEVK 560 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~es---------i~d~fl~~L~~~~~ 560 (709)
++ .+|+++|+|||||+||++|||++.+++.+++|+|.|+||+|++++|||||++ +||+|++.|+++++
T Consensus 297 a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~ 373 (549)
T cd07127 297 AR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAID 373 (549)
T ss_pred hc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHH
Confidence 86 3799999999999999999999999999999999999999999999999999 89999999999998
Q ss_pred hh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC---CC---------------------------
Q psy15158 561 KM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR---PG--------------------------- 596 (709)
Q Consensus 561 ~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~---~g--------------------------- 596 (709)
++ +++.+++++.+ ++..|+ +++||..... +|
T Consensus 374 ~l~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPV 448 (549)
T cd07127 374 GLLADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPI 448 (549)
T ss_pred HhcCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCce
Confidence 76 57777788754 455564 7777643210 11
Q ss_pred -------CHHHHHHHHhcCC--C-CCeEEEEccchHHHHHHHHh-cCee-eEEEcCCCCCCC--CCC--CCCCCCCCCCC
Q psy15158 597 -------DVDAVIKRANSTE--Y-GLASGIFTSDINKAMYFVDK-IDSG-TVFINTYNKTDV--AAP--FGGFKQSGFGK 660 (709)
Q Consensus 597 -------dldeaI~~~N~t~--y-GLta~V~T~d~~~a~~va~~-l~aG-~V~VN~~~~~~~--~~P--FGG~k~SG~G~ 660 (709)
|.+|+|+++|++. | ||+++|||+|.+.++++.++ .++| ++||| .++.+ .|| |||++.||+.+
T Consensus 449 l~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN--~tg~v~~~q~~~Fg~~~~sg~n~ 526 (549)
T cd07127 449 AFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSIN--LTGGVFVNQSAAFSDFHGTGANP 526 (549)
T ss_pred EEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEc--CCceEEEecCcCCCCCCCCCCCc
Confidence 8999999999984 4 69999999999999999988 5555 99999 45554 566 99999999999
Q ss_pred ccChH
Q psy15158 661 DLDIN 665 (709)
Q Consensus 661 ~~G~~ 665 (709)
++|.-
T Consensus 527 ~a~~~ 531 (549)
T cd07127 527 AANAA 531 (549)
T ss_pred ccccc
Confidence 98754
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-65 Score=597.19 Aligned_cols=361 Identities=19% Similarity=0.226 Sum_probs=318.0
Q ss_pred hhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHhcC--ChHHHHH---hhHHHHHHH
Q psy15158 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIE------SLDSG--AVYTLAL---KTHVGMSID 356 (709)
Q Consensus 288 ~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~------~~e~G--k~~~~a~---~~ev~~aid 356 (709)
+++++++++|++||+ .|+++|..+|.++|+++|++|++|.++|++++ ++|+| ||+.+++ ..|+..+++
T Consensus 294 ~~~~~~~~aA~~A~~-~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~ 372 (718)
T PLN02418 294 VGAREMAVAARESSR-KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAA 372 (718)
T ss_pred HHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHH
Confidence 359999999999998 99999999999999999999999999999996 77999 8887764 358999999
Q ss_pred HHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHH
Q psy15158 357 TWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436 (709)
Q Consensus 357 ~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~ 436 (709)
.++||++. .+..++..+... .+.+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.||+++..
T Consensus 373 ~~~~~a~~-~~~~g~~~~~~~-~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 373 SIRQLADM-EDPIGRVLKRTE-VADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHhcC-ccccCccccccc-cCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 99999998 344454333110 122334678999999999999999 99999 999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc----EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcC
Q psy15158 437 LAELSVRAGFPKGV----INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFD 512 (709)
Q Consensus 437 l~ell~eAGlP~gv----v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~ 512 (709)
+++++.+| +|+|+ +|+|+| +.++++.|..||+|++|+||||++. +++.++ .++||+++|+|||||+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa-~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKA-STKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHH-hcCCCEEEeCCCcceEEEeC
Confidence 99999999 99996 999998 5688999999999999999999964 444454 37899999999999999999
Q ss_pred CCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCccC
Q psy15158 513 DYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592 (709)
Q Consensus 513 dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~ 592 (709)
|||++.|++.++.++|.| ||.|+|.+|+|||+++||+ -.+.++|++++++|+++ +||...
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------G~~~~~i~~a~~~Ga~l-~Gg~~~ 582 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------GGLNDLLVALRSAGVTL-YGGPRA 582 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------ccHHHHHHHHHHCCCEE-ECCccc
Confidence 999999999999999999 9999999999999999997 04578999999999999 688541
Q ss_pred ----CCC----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCC
Q psy15158 593 ----DRP----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAP 649 (709)
Q Consensus 593 ----~~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~P 649 (709)
..+ | |+||||+++|+++|||+++|||+|.+++.++++++++|+||||+++..+...|
T Consensus 583 ~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~P 662 (718)
T PLN02418 583 SKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGAR 662 (718)
T ss_pred cCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCC
Confidence 001 1 89999999999999999999999999999999999999999999876666789
Q ss_pred CCCCCCCCC--CCcc--ChHHHHHHHHHhceeEEEEe
Q psy15158 650 FGGFKQSGF--GKDL--DINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 650 FGG~k~SG~--G~~~--G~~~~~~ftr~~~~ktV~iN 682 (709)
|||+|+||+ |+++ |++++++|++ .|++++-
T Consensus 663 fGG~k~SG~stGr~~~~G~~gl~~~t~---~K~v~~g 696 (718)
T PLN02418 663 FGLGAEVGISTGRIHARGPVGVEGLLT---TRWILRG 696 (718)
T ss_pred CCCcccccccCCcCCCCCHHHHHHHhc---EEEEEEC
Confidence 999999999 9875 9999999998 5777653
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-65 Score=569.01 Aligned_cols=353 Identities=17% Similarity=0.196 Sum_probs=303.1
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHH--HHHHHHHHHHh
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID--TWKYFAGWCDK 367 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid--~lr~~a~~~~~ 367 (709)
+++|+++|++||+ .|+++|+++|.++|++++++|++|+++|++++++|+|||+.++.. ++...+. .+++++. .
T Consensus 1 ~~~Ai~~A~~A~~-~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~---~ 75 (439)
T cd07081 1 LDDAVAAAKVAQQ-GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD---E 75 (439)
T ss_pred CHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---c
Confidence 4789999999998 999999999999999999999999999999999999999988864 4444433 2333332 1
Q ss_pred hhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH----H
Q psy15158 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV----R 443 (709)
Q Consensus 368 ~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~----e 443 (709)
..+...+.. .....++.++|+|||++|+|||||+++.+++++|||++||+||+|||++||+++..+++++. +
T Consensus 76 ~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~ 151 (439)
T cd07081 76 KTCGVLTGD----ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVA 151 (439)
T ss_pred ccCceecCC----CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHH
Confidence 222222211 12345789999999999999999999999999999999999999999999999999888875 6
Q ss_pred cCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHH
Q psy15158 444 AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMS 523 (709)
Q Consensus 444 AGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~i 523 (709)
+|+|+|++|+|+|.+.++++.|+.||+|++|+||||++ +.+.+++ ++||+++|+|||||+||++|||++.|++.+
T Consensus 152 aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~i 226 (439)
T cd07081 152 AGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSI 226 (439)
T ss_pred cCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHH
Confidence 79999999999997778999999999999999999997 4556664 789999999999999999999999999999
Q ss_pred HhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCc---------cC-C
Q psy15158 524 MGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGK---------RL-D 593 (709)
Q Consensus 524 v~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~---------~~-~ 593 (709)
+.++|+++||.|++.+|+|||+++||+|+++|++++..+++..+.+++.++|+++..+|++++.|+. .. +
T Consensus 227 v~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~p 306 (439)
T cd07081 227 VKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQ 306 (439)
T ss_pred HHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCC
Confidence 9999999999999999999999999999999999988889999999999999999999987754421 11 1
Q ss_pred ---------C--CC-------------------CHHHHHHHHhcC----CCCCeEEEEccc---hHHHHHHHHhcCeeeE
Q psy15158 594 ---------R--PG-------------------DVDAVIKRANST----EYGLASGIFTSD---INKAMYFVDKIDSGTV 636 (709)
Q Consensus 594 ---------~--~g-------------------dldeaI~~~N~t----~yGLta~V~T~d---~~~a~~va~~l~aG~V 636 (709)
. +. |+||||+++|++ +|||+++|||+| .++++++++++++|+|
T Consensus 307 t~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V 386 (439)
T cd07081 307 ETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRF 386 (439)
T ss_pred CceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEE
Confidence 0 11 999999999965 899999999999 9999999999999999
Q ss_pred EEcCCC-CCCC--CCCCCCCCCC
Q psy15158 637 FINTYN-KTDV--AAPFGGFKQS 656 (709)
Q Consensus 637 ~VN~~~-~~~~--~~PFGG~k~S 656 (709)
|||+.+ .+.. ..-|||.+.+
T Consensus 387 ~iN~~~~~~~~g~~~~~~~~~~~ 409 (439)
T cd07081 387 VKNGPCSQGGLGDLYNFRGWPSM 409 (439)
T ss_pred EEeCCccccccccccCCCCCeeE
Confidence 999765 4443 3467666654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=568.07 Aligned_cols=358 Identities=21% Similarity=0.227 Sum_probs=306.7
Q ss_pred CCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHH
Q psy15158 284 MANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363 (709)
Q Consensus 284 ~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~ 363 (709)
....+|+++|+++|++||. .|+.+|.++|.++|++++++|++|+++|++++++|+||++.++.. +.+++++.
T Consensus 32 ~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ-RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAE 103 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHH
Confidence 4577899999999999998 999999999999999999999999999999999999999887642 34566665
Q ss_pred HHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH-
Q psy15158 364 WCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV- 442 (709)
Q Consensus 364 ~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~- 442 (709)
........... .... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.||+++..+++++.
T Consensus 104 ~~~~~~~~~~~-~~~~-~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 104 KTPGVEDLTTE-ALTG-DNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HhccccccccC-cccC-CCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 43211110000 0011 12346788899999999999999999999999999999999999999999999999999876
Q ss_pred ---HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHH
Q psy15158 443 ---RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKA 519 (709)
Q Consensus 443 ---eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~A 519 (709)
++|+|+|++|+++|.+.+.++.|++||+|++|+||||+++|+.|++ ..+|+++|+|||||+||++|||++.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999877788999999999999999999999999987 35899999999999999999999999
Q ss_pred HHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCc---------
Q psy15158 520 VRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGK--------- 590 (709)
Q Consensus 520 a~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~--------- 590 (709)
++.+++++|.|+||.|+|++|||||+++||+|+++|+++...+++..+.+++.++++++..++++++.||.
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G 336 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAG 336 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCC
Confidence 99999999999999999999999999999999999999866668899999999999854322323333221
Q ss_pred -cCC----------CC----------C---------CHHHHHHHHhcCCCCC--eEEEEccchHHHHHHHHhcCeeeEEE
Q psy15158 591 -RLD----------RP----------G---------DVDAVIKRANSTEYGL--ASGIFTSDINKAMYFVDKIDSGTVFI 638 (709)
Q Consensus 591 -~~~----------~~----------g---------dldeaI~~~N~t~yGL--ta~V~T~d~~~a~~va~~l~aG~V~V 638 (709)
..+ .+ | |+||||+++|+++||| +++|||+|.++++++++++++|+|||
T Consensus 337 ~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~i 416 (465)
T PRK15398 337 INVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVK 416 (465)
T ss_pred CCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEE
Confidence 000 00 1 9999999999999998 99999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCC
Q psy15158 639 NTYNKTDVAAPFGGFKQSGF 658 (709)
Q Consensus 639 N~~~~~~~~~PFGG~k~SG~ 658 (709)
|++.. ..+||||.|.|.+
T Consensus 417 N~~~~--~~~p~gg~~~s~~ 434 (465)
T PRK15398 417 NGPSY--AGLGLGGEGFTTF 434 (465)
T ss_pred CCCCc--cccCcCCCCCcee
Confidence 97643 5689999999997
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-64 Score=557.44 Aligned_cols=373 Identities=18% Similarity=0.237 Sum_probs=315.4
Q ss_pred hhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChH----HHHHh-------hHHHHHHH
Q psy15158 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVY----TLALK-------THVGMSID 356 (709)
Q Consensus 288 ~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~----~~a~~-------~ev~~aid 356 (709)
+++++++++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 4 ~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 4 EYLEELGRRAKAASR-KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 689999999999998 9999999999999999999999999999999998887774 24431 37888999
Q ss_pred HHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHH
Q psy15158 357 TWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436 (709)
Q Consensus 357 ~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~ 436 (709)
.++|++.+++.. +...+... .+.+...+++++|+|||++|+||| | .+.+++++|||++||+||+|||+.||+++.+
T Consensus 83 ~~~~~a~~~~~~-g~~~~~~~-~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~ 158 (417)
T PRK00197 83 GLRQVAALPDPV-GEVLDGWT-LPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA 158 (417)
T ss_pred HHHHHhhcCCCc-ccccccee-cCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence 999999877643 44333210 122234688999999999999986 4 6778999999999999999999999999999
Q ss_pred HHHHH----HHcCCCCCcEEEecCCc-hhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEc
Q psy15158 437 LAELS----VRAGFPKGVINILPGTG-AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIF 511 (709)
Q Consensus 437 l~ell----~eAGlP~gvv~vv~g~g-~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~ 511 (709)
+++++ .++|+|+|++|+|+|.+ .++++.|..||+|++|+||||+++|+.|++.+ ++|+++|||||||+||+
T Consensus 159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~ 234 (417)
T PRK00197 159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVD 234 (417)
T ss_pred HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEe
Confidence 98885 68999999999999644 55888899999999999999999999998853 58999999999999999
Q ss_pred CCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHhcCCEEEE
Q psy15158 512 DDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN----HKAHLDKLIDYCEKAKSEGARLLI 587 (709)
Q Consensus 512 ~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~----~~~~~~~i~~~i~~a~~~Ga~vl~ 587 (709)
+|||++.|++.+++++|.|+| .|+|++|+|||+++||+|+++|+++++++. ..... ..++ .+++.
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~---~~~~-------PTi~~ 303 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVELRGDEAA---LALL-------PDVVP 303 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCeEecCHHH---HHhh-------ccccc
Confidence 999999999999999999999 999999999999999999999999999871 11110 1122 12321
Q ss_pred CCccC-CC--CC---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCC
Q psy15158 588 GGKRL-DR--PG---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQ 655 (709)
Q Consensus 588 GG~~~-~~--~g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~ 655 (709)
..... .. -| |+||||+++|+++|||+++|||+|.++++++++++++|+||||++...+...||||.|.
T Consensus 304 ~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~ 383 (417)
T PRK00197 304 ATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAE 383 (417)
T ss_pred CCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchh
Confidence 00000 00 01 89999999999999999999999999999999999999999999877667789999999
Q ss_pred CCCC----CccChHHHHHHHHHhceeEEEEec
Q psy15158 656 SGFG----KDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 656 SG~G----~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
||+| +++|.+++++|++ .|++++..
T Consensus 384 sG~g~~~~~~~g~~~l~~~~~---~k~v~~~~ 412 (417)
T PRK00197 384 IGISTQKLHARGPMGLEELTT---YKYIVLGD 412 (417)
T ss_pred heeecCCCcCCCccchHhhcE---EEEEEECC
Confidence 9999 9999999998888 68887754
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-64 Score=556.87 Aligned_cols=350 Identities=19% Similarity=0.219 Sum_probs=302.8
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHH-HHHHHHHHHHhh
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID-TWKYFAGWCDKI 368 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid-~lr~~a~~~~~~ 368 (709)
+++|+++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.++...++..+++ .++|++.. +.
T Consensus 1 ~~~av~~A~~A~~-~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~ 77 (436)
T cd07122 1 VDELVERARKAQR-EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KT 77 (436)
T ss_pred ChHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cc
Confidence 4789999999998 99999999999999999999999999999999999999999887547777887 88888863 33
Q ss_pred hCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHH----Hc
Q psy15158 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSV----RA 444 (709)
Q Consensus 369 ~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~----eA 444 (709)
.+...+ ..+...+++++|+|||++|+|||||+.+.+|++++||++||+||+|||+.+|+++..+++++. ++
T Consensus 78 ~g~~~~-----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~ea 152 (436)
T cd07122 78 VGVIEE-----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAA 152 (436)
T ss_pred eeeecc-----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHc
Confidence 322111 112346788999999999999999999999999999999999999999999999999888865 78
Q ss_pred CCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHH
Q psy15158 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSM 524 (709)
Q Consensus 445 GlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv 524 (709)
|+|+|++|+++|.+.++++.|+.||+|+.|+||||+++++ .++ .+++|+++|+|||||+||++|||++.|++.++
T Consensus 153 G~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~ 227 (436)
T cd07122 153 GAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDII 227 (436)
T ss_pred CCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence 9999999999997778999999999999999999998764 444 37899999999999999999999999999999
Q ss_pred hhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHH-----------------------HHHhc
Q psy15158 525 GGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCE-----------------------KAKSE 581 (709)
Q Consensus 525 ~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~-----------------------~a~~~ 581 (709)
+|+|.|+||.|++++|||||+++||+|+++|+++...+++.++.+++.+.+. .+..+
T Consensus 228 ~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ 307 (436)
T cd07122 228 LSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPE 307 (436)
T ss_pred HHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999988877777777766542 23355
Q ss_pred CCEEEECCccC-C--C----C--C---------CHHHHHHHHhcC----CCCCeEEEEccchHHHHHHHHhcCeeeEEEc
Q psy15158 582 GARLLIGGKRL-D--R----P--G---------DVDAVIKRANST----EYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639 (709)
Q Consensus 582 Ga~vl~GG~~~-~--~----~--g---------dldeaI~~~N~t----~yGLta~V~T~d~~~a~~va~~l~aG~V~VN 639 (709)
|++++++|... . . + | |+||||+++|++ +|||+++|||+|..+++++++++++|+||||
T Consensus 308 ga~vl~~~~~~v~~~~~~~~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN 387 (436)
T cd07122 308 DTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVN 387 (436)
T ss_pred CCeEEEEecCCCCCCCcchhcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEe
Confidence 67777766221 1 0 0 1 899999999997 8999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q psy15158 640 TYNKTDVAAPFGGFKQSGF 658 (709)
Q Consensus 640 ~~~~~~~~~PFGG~k~SG~ 658 (709)
++.. |||.|.+|.
T Consensus 388 ~~~~------~~~~g~~~~ 400 (436)
T cd07122 388 TPSS------LGGIGDTYN 400 (436)
T ss_pred CCcc------ccccCccCC
Confidence 8765 566665555
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=550.43 Aligned_cols=381 Identities=48% Similarity=0.835 Sum_probs=350.6
Q ss_pred HHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhC
Q psy15158 291 DIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370 (709)
Q Consensus 291 ~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g 370 (709)
++++++|++|++ .|+.+|.++|.++|++++++|.+++++|+++++.|+||+..++.. |+..+++.++|++..++++.+
T Consensus 1 ~~av~~a~~a~~-~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~-ei~~~i~~l~~~~~~~~~~~~ 78 (432)
T cd07078 1 DAAVAAARAAFK-AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG-EVARAADTFRYYAGLARRLHG 78 (432)
T ss_pred CHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 368999999998 999999999999999999999999999999999999999988774 999999999999998888766
Q ss_pred ccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCc
Q psy15158 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450 (709)
Q Consensus 371 ~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gv 450 (709)
...+. .+.+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|+
T Consensus 79 ~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~ 155 (432)
T cd07078 79 EVIPS---PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGV 155 (432)
T ss_pred ccccc---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCc
Confidence 54321 123455778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 451 v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~ 530 (709)
+++++|++.+++..|..|++++.|.||||+.+++.|.+.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.+
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~ 234 (432)
T cd07078 156 LNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGN 234 (432)
T ss_pred EEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhc
Confidence 999999777789999999999999999999999999999885 7899999999999999999999999999999999999
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC-
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR- 594 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~- 594 (709)
+||.|+++++||||++++++|+++|+++++++ +++.+.+++.++++++.++|+++++||...+.
T Consensus 235 ~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~ 314 (432)
T cd07078 235 AGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGG 314 (432)
T ss_pred cCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCC
Confidence 99999999999999999999999999999875 47889999999999999999999998864321
Q ss_pred CC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCC
Q psy15158 595 PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641 (709)
Q Consensus 595 ~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~ 641 (709)
.| +++|+|+++|+++|||+++|||+|.+.+++++.++++|+|+||+.
T Consensus 315 ~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 394 (432)
T cd07078 315 KGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDY 394 (432)
T ss_pred CCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCC
Confidence 01 899999999999999999999999999999999999999999998
Q ss_pred CCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 642 NKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 642 ~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
... ...+||||.|.||+|+.+|.+++..|++ .|+++
T Consensus 395 ~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~---~k~v~ 431 (432)
T cd07078 395 SVGAEPSAPFGGVKQSGIGREGGPYGLEEYTE---PKTVT 431 (432)
T ss_pred CCCCCCCCCcCCcCcCcCCccchHHHHHHhhc---eEEEE
Confidence 877 6689999999999999999999998888 46653
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-64 Score=554.17 Aligned_cols=374 Identities=19% Similarity=0.206 Sum_probs=306.2
Q ss_pred HHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHH----HHHh-------hHHHHHHHHHHH
Q psy15158 292 IAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT----LALK-------THVGMSIDTWKY 360 (709)
Q Consensus 292 ~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~----~a~~-------~ev~~aid~lr~ 360 (709)
..+++|++||+ .|+++|.++|.++|.+++++|++|+++|++++++|.||+.. ++.. .|+..+++.++|
T Consensus 2 ~~~~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~ 80 (406)
T cd07079 2 ELAKRAKAASR-ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQ 80 (406)
T ss_pred hHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHH
Confidence 46788999998 99999999999999999999999999999999777776643 3321 389999999999
Q ss_pred HHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHH
Q psy15158 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440 (709)
Q Consensus 361 ~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~el 440 (709)
++...+ ..+...+... .+.+...+++++|+|||++|+|| +| .+.+++++|||++||+||+|||+.||+++..++++
T Consensus 81 ~a~~~~-~~g~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 81 VAALPD-PVGEVLRGWT-LPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHhcCC-CCccccccee-ccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 997654 2333322110 11223467889999999999997 56 67889999999999999999999999999999999
Q ss_pred HH----HcCCCCCcEEEecCCch-hHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCC
Q psy15158 441 SV----RAGFPKGVINILPGTGA-VTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYN 515 (709)
Q Consensus 441 l~----eAGlP~gvv~vv~g~g~-~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dAD 515 (709)
+. ++|+|+|++|+++|.+. .+++.|..||+|++|+||||+++|+.|++.+ ++|+++|||||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 87 89999999999998554 6788999999999999999999999998865 689999999999999999999
Q ss_pred HHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----hcHHHHHHHHHHHHHHHhcCCEEEECCcc
Q psy15158 516 LDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----NHKAHLDKLIDYCEKAKSEGARLLIGGKR 591 (709)
Q Consensus 516 le~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~ 591 (709)
++.|++.+++++|.|+| .|+|++|||||+++||+|+++|++++++. ..... ...++.-.......++.--.+
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~ga~~~~g~~---~~~~~~ptv~~d~~i~~eE~F 308 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDEE---TLAILPGAKPATEEDWGTEYL 308 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCCCEEecCHH---HHHhcccccCCCcchhhhhhh
Confidence 99999999999999999 99999999999999999999999988765 00000 001211111111111100000
Q ss_pred CC-----CCCCHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCC----CCcc
Q psy15158 592 LD-----RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGF----GKDL 662 (709)
Q Consensus 592 ~~-----~~gdldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~----G~~~ 662 (709)
.+ .-.|+||||+++|+++|||+++|||+|.++++++++++++|+||||++......+||||.|.||+ |++.
T Consensus 309 GPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~ 388 (406)
T cd07079 309 DLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHAR 388 (406)
T ss_pred CceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCC
Confidence 00 00189999999999999999999999999999999999999999999876666789999999998 8999
Q ss_pred ChHHHHHHHHHhceeEEEE
Q psy15158 663 DINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~i 681 (709)
|.+++.+|++ .|+++.
T Consensus 389 g~~~l~~~~~---~k~i~~ 404 (406)
T cd07079 389 GPMGLEELTT---YKYIVR 404 (406)
T ss_pred CCcChHHhcE---EEEEEe
Confidence 9999998888 577653
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-62 Score=552.80 Aligned_cols=373 Identities=16% Similarity=0.135 Sum_probs=317.7
Q ss_pred CCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHH
Q psy15158 284 MANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363 (709)
Q Consensus 284 ~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~ 363 (709)
..+.+++++++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+||+..+....+...+...+.+++.
T Consensus 4 ~~~~~~v~~av~~A~~A~~-~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~ 82 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK-KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIK 82 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHh
Confidence 4578899999999999998 999999999999999999999999999999999999999877542222334555555554
Q ss_pred HHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHH----H
Q psy15158 364 WCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLA----E 439 (709)
Q Consensus 364 ~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~----e 439 (709)
..+. .|. .. .+++...+.+++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|+++..++ +
T Consensus 83 ~~~~-~G~-~~----~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~ 156 (488)
T TIGR02518 83 DMKT-IGI-LS----EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRK 156 (488)
T ss_pred hCcc-cce-ec----CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHH
Confidence 3222 232 11 122344678899999999999999999999999999999999999999999999999855 4
Q ss_pred HHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHH
Q psy15158 440 LSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKA 519 (709)
Q Consensus 440 ll~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~A 519 (709)
++.++|+|+|++|++++.+.+.++.|+.||+|++|+||||+.+++ .++ ++++|+++|+|||+|+||++|||++.|
T Consensus 157 ~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~----~a~-~~~~pv~~e~gGn~p~iV~~dADld~A 231 (488)
T TIGR02518 157 AAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVK----AAY-SSGTPAIGVGPGNGPAYIERTANVKKA 231 (488)
T ss_pred HHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHH----HHH-HcCCCEEEEcCCCCeEEEeCCCCHHHH
Confidence 457999999999999997788999999999999999999998654 444 368999999999999999999999999
Q ss_pred HHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHH-------HHhh----------------hcHHHHHHHHHHHH
Q psy15158 520 VRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTE-------VKKM----------------NHKAHLDKLIDYCE 576 (709)
Q Consensus 520 a~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~-------~~~l----------------~~~~~~~~i~~~i~ 576 (709)
++.+++|+|+++||.|+|.+|||||+++||+|+++|++. .+.+ ++..+.+++.++++
T Consensus 232 a~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~ 311 (488)
T TIGR02518 232 VRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAG 311 (488)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhc
Confidence 999999999999999999999999999999999999987 3332 46678899999999
Q ss_pred HHHhcCCEEEECCccCCCC---------C---------CHHHHHHHHhc----CCCCCeEEEEccchHHHHHHHHhcCee
Q psy15158 577 KAKSEGARLLIGGKRLDRP---------G---------DVDAVIKRANS----TEYGLASGIFTSDINKAMYFVDKIDSG 634 (709)
Q Consensus 577 ~a~~~Ga~vl~GG~~~~~~---------g---------dldeaI~~~N~----t~yGLta~V~T~d~~~a~~va~~l~aG 634 (709)
.++.+|+++++||.....+ | |+||||+++|+ ++||||++|||+|.++++++++++++|
T Consensus 312 ~av~~gakll~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag 391 (488)
T TIGR02518 312 LTVPEDAKVLIGEQNGVGNKNPYSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVS 391 (488)
T ss_pred cccCCCCEEEEeCCCCCCCCCccccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCee
Confidence 9999999999998531111 1 89999999887 799999999999999999999999999
Q ss_pred eEEEcCCCC----CCC--CCC-----CCCCCCCCCCCccChHHHH
Q psy15158 635 TVFINTYNK----TDV--AAP-----FGGFKQSGFGKDLDINKAM 668 (709)
Q Consensus 635 ~V~VN~~~~----~~~--~~P-----FGG~k~SG~G~~~G~~~~~ 668 (709)
+||||++.. ++. ..| ||+++.++++...|.+++.
T Consensus 392 ~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~~~v~~~~l~ 436 (488)
T TIGR02518 392 RMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTSDNITPENLI 436 (488)
T ss_pred EEEEcCCCcccccccccCCCccccccccccCCCcCCCCCCHHHhh
Confidence 999997542 221 356 9999999999766766555
|
|
| >KOG2454|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-62 Score=507.62 Aligned_cols=420 Identities=28% Similarity=0.480 Sum_probs=374.4
Q ss_pred CCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHH
Q psy15158 265 GSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT 344 (709)
Q Consensus 265 ~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~ 344 (709)
.++++.+-|+||+.+++++.-++.|+++-+..|++|++ +|.+.+...|.+.|+.+.+.+-+|++.+++..++++||+.-
T Consensus 63 ~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk-tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 63 DKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK-TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh-hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 46799999999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCC-----CceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcC
Q psy15158 345 LALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNS-----NFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAG 419 (709)
Q Consensus 345 ~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~-----~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaG 419 (709)
+|..+|+--+.+.+.|.....++..... .+|++ .-.++.++|+||+++|.|||||+...++.+.+||.+|
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~-----~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsG 216 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPE-----SRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSG 216 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCc-----CCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcC
Confidence 9887888888888888766554433221 12332 2246889999999999999999999999999999999
Q ss_pred CEEEeeCCCCchHHHHHHHHHH----HHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCC
Q psy15158 420 NTVVMKPSEVSPLTALKLAELS----VRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL 495 (709)
Q Consensus 420 NtVVlKPs~~tplta~~l~ell----~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~ 495 (709)
|++|+|-||.+..+.....|++ +..|-|++++|++.+- ++.+++|++|+.++.+.|.||+++++.|++.+|+ .+
T Consensus 217 NaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~L 294 (583)
T KOG2454|consen 217 NAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TL 294 (583)
T ss_pred CeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hc
Confidence 9999999999999988776664 4459999999999986 5789999999999999999999999999999985 89
Q ss_pred CcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------------
Q psy15158 496 KKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------------- 562 (709)
Q Consensus 496 k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------------- 562 (709)
.|+++|||||+|.||.+|||++..+.-++++.|.++||.|....|++||+++||.|+..|..+++.+
T Consensus 295 TPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMG 374 (583)
T KOG2454|consen 295 TPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMG 374 (583)
T ss_pred CcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred --hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC-------------------------------------CHHHHHH
Q psy15158 563 --NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG-------------------------------------DVDAVIK 603 (709)
Q Consensus 563 --~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g-------------------------------------dldeaI~ 603 (709)
.+..+++.++.++++|+.+||++++||.+...+. +.|++|+
T Consensus 375 Am~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~ 454 (583)
T KOG2454|consen 375 AMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIK 454 (583)
T ss_pred hhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHh
Confidence 6788899999999999999999999998543221 7899999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCC-CCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDV-AAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~-~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++||+.|..++.+++.+++.|+|.||+....-+ ++||||.|.||+||-+|.+++.-... .|.|...
T Consensus 455 lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn---~Ksv~yd 531 (583)
T KOG2454|consen 455 LANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCN---VKSVAYD 531 (583)
T ss_pred hccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhc---ccceecc
Confidence 9999999999999999999999999999999999999876554 68999999999999999999998877 6787444
Q ss_pred cc------CCCCCCCCCCC
Q psy15158 683 TY------NKTDVAAPFGG 695 (709)
Q Consensus 683 ~~------~~~~~~~Pf~g 695 (709)
+. .+....||.-+
T Consensus 532 ~~~~~~t~ip~aldypi~~ 550 (583)
T KOG2454|consen 532 RVAENATEIPEALDYPIYG 550 (583)
T ss_pred chhhhhccCCccccccCcC
Confidence 21 13345677644
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-61 Score=574.28 Aligned_cols=390 Identities=19% Similarity=0.193 Sum_probs=330.8
Q ss_pred EEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHH
Q psy15158 281 SVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360 (709)
Q Consensus 281 ~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~ 360 (709)
+...++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|||+.++...+...+++.+++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~ 83 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE-EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYN 83 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 4566899999999999999998 999999999999999999999999999999999999999987753234444444443
Q ss_pred HHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHH
Q psy15158 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440 (709)
Q Consensus 361 ~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~el 440 (709)
+.. .++..+. .+ .+.....+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.||+++..++++
T Consensus 84 ~~~-~~~~~g~-~~----~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l 157 (862)
T PRK13805 84 SYK-DEKTVGV-IE----EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKI 157 (862)
T ss_pred Hhc-CCCcccc-cC----cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHH
Confidence 332 1122221 11 11223467889999999999999999999999999999999999999999999999999888
Q ss_pred HH----HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCH
Q psy15158 441 SV----RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNL 516 (709)
Q Consensus 441 l~----eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADl 516 (709)
+. ++|+|+|++|+++|.+.+.++.|+.||+|+.|.||||+.++ +.++ ++++|+++|+|||||+||++|||+
T Consensus 158 ~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~-~~~~pv~~e~gGk~p~iV~~dADl 232 (862)
T PRK13805 158 VLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAY-SSGKPALGVGAGNVPAYIDKTADI 232 (862)
T ss_pred HHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHH-hcCCCeEEECCCCCeEEEeCCCCH
Confidence 75 68999999999999778899999999999999999999865 3444 479999999999999999999999
Q ss_pred HHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEE-EECCc-----
Q psy15158 517 DKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARL-LIGGK----- 590 (709)
Q Consensus 517 e~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~v-l~GG~----- 590 (709)
+.|++.+++|+|+|+||.|+|++|||||++++|+|+++|+++...+++..+.+++.++++++...+++. ++||.
T Consensus 233 ~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~ 312 (862)
T PRK13805 233 KRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIA 312 (862)
T ss_pred HHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHH
Confidence 999999999999999999999999999999999999999999888899999999999999876554321 33331
Q ss_pred ------c----------CCC--C---------C---------CHHHHHHHHhc----CCCCCeEEEEccchHHHHHHHHh
Q psy15158 591 ------R----------LDR--P---------G---------DVDAVIKRANS----TEYGLASGIFTSDINKAMYFVDK 630 (709)
Q Consensus 591 ------~----------~~~--~---------g---------dldeaI~~~N~----t~yGLta~V~T~d~~~a~~va~~ 630 (709)
. ... + | |+||||+++|+ ++|||+++|||+|.+++++++++
T Consensus 313 ~~~G~~~~p~~~~~i~~l~~v~~~~~~~~E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~ 392 (862)
T PRK13805 313 EMAGFKVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLR 392 (862)
T ss_pred HHcCCCCCCCCeEEEEecCCCCCCCcchhcccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhh
Confidence 1 110 0 0 99999999988 58999999999999999999999
Q ss_pred cCeeeEEEcCCC----------CCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccCC
Q psy15158 631 IDSGTVFINTYN----------KTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNK 686 (709)
Q Consensus 631 l~aG~V~VN~~~----------~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~~ 686 (709)
+++|+||||+++ ...+..|||| |.||.|...|..+++.|++ .|.|......+
T Consensus 393 l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~---~k~v~~~~~~~ 454 (862)
T PRK13805 393 MKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLN---IKTVAKRRENM 454 (862)
T ss_pred CCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhhe---eeeeeeccccc
Confidence 999999999875 2345689998 9999999999999999988 57776655433
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-60 Score=523.66 Aligned_cols=351 Identities=21% Similarity=0.212 Sum_probs=307.2
Q ss_pred HHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHH----------hhHHHHHHHHHHHHHHH
Q psy15158 295 LAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL----------KTHVGMSIDTWKYFAGW 364 (709)
Q Consensus 295 ~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~----------~~ev~~aid~lr~~a~~ 364 (709)
++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||++..+. ..|+..+++.++|++..
T Consensus 1 ~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQR-TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 36889998 99999999999999999999999999999999999999965432 13788999999999987
Q ss_pred HHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHc
Q psy15158 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444 (709)
Q Consensus 365 ~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eA 444 (709)
..+..+...+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 80 ~~~~~~~~~~~------~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~ 152 (397)
T cd07077 80 VGHIQDVLLPD------NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAA 152 (397)
T ss_pred cCcccceEecC------CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHH
Confidence 65554432221 2346889999999999999999999 9999999999999999999999999999999999987
Q ss_pred ---CCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHH
Q psy15158 445 ---GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVR 521 (709)
Q Consensus 445 ---GlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~ 521 (709)
|+|+++++++++.+.++++.|+.||++++|+||||+++++.+.+.+. .+|+++|+||++|+||++|||++.|++
T Consensus 153 ~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~ 229 (397)
T cd07077 153 DAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASG 229 (397)
T ss_pred hhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHH
Confidence 99999999999877789999999999999999999999999888662 689999999999999999999999999
Q ss_pred HHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCccC------CC-
Q psy15158 522 MSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRL------DR- 594 (709)
Q Consensus 522 ~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~------~~- 594 (709)
.+++++|+| ||.|+|++|||||++++|+|+++|+++++. +|++++.||... +.
T Consensus 230 ~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~-------------------~G~~~~~g~~~~~~~pt~~~~ 289 (397)
T cd07077 230 SVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV-------------------EGLKVPQETKPLSKETTPSFD 289 (397)
T ss_pred HHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh-------------------cCcCcCCCceeeEEeccCCCC
Confidence 999999999 999999999999999999999999988864 345555544210 00
Q ss_pred ----C--C---------CH----HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCC
Q psy15158 595 ----P--G---------DV----DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGF 653 (709)
Q Consensus 595 ----~--g---------dl----deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~ 653 (709)
+ | |+ ++|++++|+++|||+++|||+|.+++.++++++++|+|+||+..... ...||||.
T Consensus 290 ~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~ 369 (397)
T cd07077 290 DEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVE 369 (397)
T ss_pred hhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcc
Confidence 0 1 56 47777899999999999999999999999999999999999877654 56799999
Q ss_pred C--CCCCCCccC-hHHHHHHHHHhceeEE
Q psy15158 654 K--QSGFGKDLD-INKAMYFVDKIDSGTV 679 (709)
Q Consensus 654 k--~SG~G~~~G-~~~~~~ftr~~~~ktV 679 (709)
+ .||.|+.+| .++++.|++ .|++
T Consensus 370 ~~~~SG~g~~~g~~~~~~~~~~---~k~v 395 (397)
T cd07077 370 RIVTSGMNNIFGAGVGHDALRP---LKRL 395 (397)
T ss_pred eEEEccccCCCCCCCChHHhcc---eeEe
Confidence 9 899999999 999998888 4555
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-59 Score=518.29 Aligned_cols=339 Identities=19% Similarity=0.202 Sum_probs=285.8
Q ss_pred HHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHhcCChH--HH----HHhhHHHHHHHHHHHHHHH
Q psy15158 297 AEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATI------ESLDSGAVY--TL----ALKTHVGMSIDTWKYFAGW 364 (709)
Q Consensus 297 A~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l------~~~e~Gk~~--~~----a~~~ev~~aid~lr~~a~~ 364 (709)
|++||+ .|+++|..+|.++|++++++|++|+++|+++ +++|+|||. .+ +. .|+..+++.++||++.
T Consensus 1 a~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~ 78 (398)
T TIGR00407 1 AKQAAN-ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIEL 78 (398)
T ss_pred ChhHHH-HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcC
Confidence 567887 9999999999999999999999999999999 999999993 22 34 4899999999999998
Q ss_pred HHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHH----
Q psy15158 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL---- 440 (709)
Q Consensus 365 ~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~el---- 440 (709)
++.+ ++..+... ..++...+++++|+|||++|+||| | ...+++++|||++||+||+|||+.||+++..++++
T Consensus 79 a~~~-g~~~~~~~-~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a 154 (398)
T TIGR00407 79 ADPV-GKVIDGRE-LDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA 154 (398)
T ss_pred CCCC-ccccccee-cCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence 8654 54333211 112345788999999999999997 6 66888999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEecCCc-hhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHH
Q psy15158 441 SVRAGFPKGVINILPGTG-AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKA 519 (709)
Q Consensus 441 l~eAGlP~gvv~vv~g~g-~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~A 519 (709)
+.++|+|+|++|+|+|.+ +++++.|..||+|++|+||||+.+++.+.+. ..+|+++|+|||||+||++|||++.|
T Consensus 155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A 230 (398)
T TIGR00407 155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA 230 (398)
T ss_pred HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence 569999999999999844 4688999999999999999999999987763 45899999999999999999999999
Q ss_pred HHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHhcCCEEEECCccC-CCC
Q psy15158 520 VRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---NHKAHLDKLIDYCEKAKSEGARLLIGGKRL-DRP 595 (709)
Q Consensus 520 a~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~~ 595 (709)
++.+++|+|.+ ||.|+|.+|+|||+++||+|+++|+++++++ .+. .+.+.+++..+ |.+++--.... ..+
T Consensus 231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~~~~--~~~i~~~v~~g---~~tv~~~~~~i~~eE 304 (398)
T TIGR00407 231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVTIHA--DAYALKLLELG---PATEAIVCKTDFDKE 304 (398)
T ss_pred HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCEEec--CHHHHHHHhcc---Cccccccccccccch
Confidence 99999999975 9999999999999999999999999999876 222 23444444331 12222100000 011
Q ss_pred --C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCC
Q psy15158 596 --G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFG 651 (709)
Q Consensus 596 --g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFG 651 (709)
| |++|||+++|+++|||+++|||+|.++++++++++++|+|+||+++..+...|||
T Consensus 305 ~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG 371 (398)
T TIGR00407 305 FLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFG 371 (398)
T ss_pred hhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccc
Confidence 1 9999999999999999999999999999999999999999999988777778998
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-58 Score=543.29 Aligned_cols=357 Identities=18% Similarity=0.196 Sum_probs=303.5
Q ss_pred hHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh---------------HHHH
Q psy15158 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT---------------HVGM 353 (709)
Q Consensus 289 dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~---------------ev~~ 353 (709)
+++..+++|++||+ .|+.+|.++|.++|++++++|++|.++|+ .+.||++.++... |+..
T Consensus 287 ~~~~~~~~A~~A~~-~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~ 361 (715)
T TIGR01092 287 GERDMAVAARESSR-MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISS 361 (715)
T ss_pred HHHHHHHHHHHHHH-hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHH
Confidence 48888999999998 99999999999999999999999999996 5889998877532 4777
Q ss_pred HHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHH
Q psy15158 354 SIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433 (709)
Q Consensus 354 aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplt 433 (709)
+++.++|+++ ..+..+...+.. ..+.+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.||++
T Consensus 362 ~~~~l~~~a~-~~~~~g~~~~~~-~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 362 LAISLRQLAA-MEDPIGRVLKRT-RIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHhc-CCCccccccccc-ccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 8888898887 333333332211 1112233567899999999999999 9999 5899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----cEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEE
Q psy15158 434 ALKLAELSVRAGFPKG----VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509 (709)
Q Consensus 434 a~~l~ell~eAGlP~g----vv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~I 509 (709)
+..+++++.++ +|+| ++++|++ ++++++.|..||++++|+||||+++|+.|+++++ +|+++|+|||||+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5678899999999999999999999999998753 89999999999999
Q ss_pred EcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECC
Q psy15158 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGG 589 (709)
Q Consensus 510 V~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG 589 (709)
|++|||++.|++.++.++|.+ ||.|+|++|||||++++|+ ..+.++++.++++|++++ ||
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~------------------~~~~~~v~~~~~~Ga~l~-Gg 571 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN------------------GLLDDLIDMLRTEGVTIH-GG 571 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc------------------hhHHHHHHHHHHCCCEEE-CC
Confidence 999999999987777777666 9999999999999999985 025567777777898874 77
Q ss_pred ccC------CCC----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC
Q psy15158 590 KRL------DRP----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT 644 (709)
Q Consensus 590 ~~~------~~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~ 644 (709)
... ..+ | |+||||+++|+++|||+++|||+|.+++.++++++++|.||||+++..
T Consensus 572 ~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~ 651 (715)
T TIGR01092 572 PRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRF 651 (715)
T ss_pred cchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCC
Confidence 531 001 1 999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCCCCCCCCCCC----ccChHHHHHHHHHhceeEEEEec
Q psy15158 645 DVAAPFGGFKQSGFGK----DLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 645 ~~~~PFGG~k~SG~G~----~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
....||||+|.||+|+ +.|++++++|++ .|++++..
T Consensus 652 ~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~---~k~v~~g~ 691 (715)
T TIGR01092 652 SDGFRFGLGAEVGISTSRIHARGPVGVEGLLT---TRWLLRGK 691 (715)
T ss_pred CCCCCCcCccccccccCCCCCCChhHHHHhce---EEEEEECC
Confidence 6678999999999995 378888888888 57776543
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-58 Score=501.87 Aligned_cols=362 Identities=45% Similarity=0.770 Sum_probs=315.1
Q ss_pred HHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccc
Q psy15158 296 AAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI 375 (709)
Q Consensus 296 aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~ 375 (709)
+|++|+. .|+.+|.++|.++|++++++|.++.++|++++++|+|||+.++.. |+..+++.++|++.+++++.+...+.
T Consensus 2 ~a~~a~~-~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~~ 79 (367)
T cd06534 2 AARAAFK-AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELPS 79 (367)
T ss_pred hHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 5788897 999999999999999999999999999999999999999999885 99999999999999988876633221
Q ss_pred cCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEec
Q psy15158 376 AHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILP 455 (709)
Q Consensus 376 ~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~ 455 (709)
.+.+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++++++
T Consensus 80 ---~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~ 156 (367)
T cd06534 80 ---PDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVP 156 (367)
T ss_pred ---cCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEE
Confidence 12345578899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcc
Q psy15158 456 GTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENC 535 (709)
Q Consensus 456 g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C 535 (709)
|++++.++.|..|++++.|.||||+++++.|.+.+++ +++|+++|+||+|++||++|||++.|++.++.++|.++||.|
T Consensus 157 ~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C 235 (367)
T cd06534 157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQIC 235 (367)
T ss_pred cCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 9877789999999999999999999999999999885 689999999999999999999999999999999999999999
Q ss_pred cCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCcc-CCCCCCHHHHHHHHhcCCCCCeE
Q psy15158 536 ISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKR-LDRPGDVDAVIKRANSTEYGLAS 614 (709)
Q Consensus 536 ~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-~~~~gdldeaI~~~N~t~yGLta 614 (709)
+++++||||++++|+|+++|+..+... .... ....++ +.|--. +-.-.+++|+|+++|++++||++
T Consensus 236 ~s~~~v~v~~~~~~~f~~~l~tl~~~~-~~~~--------~~~~~E----~fgPv~~v~~~~~~~eai~~~n~~~~gl~~ 302 (367)
T cd06534 236 TAASRLLVHESIYDEFVEKLVTVLVDV-DPDM--------PIAQEE----IFGPVLPVIRFKDEEEAIALANDTEYGLTA 302 (367)
T ss_pred CCCcEEEEcHHHHHHHHHhhceeeeCC-CCCC--------ccccCC----ccCceEEEEecCCHHHHHHHHhCCCCCCeE
Confidence 999999999999999999997111000 0000 000000 000000 00011899999999999999999
Q ss_pred EEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 615 GIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 615 ~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
+|||+|.+.+++++.++++|+|+||+.+.. ....||||.|.||+|+++|.+.+..|++ .|++
T Consensus 303 ~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~---~k~i 365 (367)
T cd06534 303 GVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTR---TKTV 365 (367)
T ss_pred EEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHhce---EEEE
Confidence 999999999999999999999999998877 6789999999999999999998888888 4554
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >KOG2456|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=476.96 Aligned_cols=382 Identities=25% Similarity=0.365 Sum_probs=336.2
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~ 369 (709)
+++.++.+|.+|. .-+..|.+-|.+.|+++..++++|.++|..++..+.+|+..++...|+...+..++|+....++..
T Consensus 4 ~~~~v~~~R~~F~-sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv 82 (477)
T KOG2456|consen 4 ISETVRRLRLAFS-SGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWV 82 (477)
T ss_pred HHHHHHHHHHHHh-cCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhc
Confidence 4566899999998 668999999999999999999999999999999999999999888899999999999988877655
Q ss_pred CccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCC
Q psy15158 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449 (709)
Q Consensus 370 g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~g 449 (709)
..........+--...+++.+|+|||++|+|||||+.+.+..+++||||||+||+||||.+|.++..+++++-+. ++++
T Consensus 83 ~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~ 161 (477)
T KOG2456|consen 83 KPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQD 161 (477)
T ss_pred cccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcc
Confidence 432111111111234678999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhc
Q psy15158 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529 (709)
Q Consensus 450 vv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~ 529 (709)
.+.+|.|.-++.+ .|+.| +.|.|.||||+.+|+.|+.++++ ++.||++|||||||++|++|||++-|++.|++++|.
T Consensus 162 ~~~VV~Ggv~ETt-~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~ 238 (477)
T KOG2456|consen 162 LIRVVNGGVPETT-ELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWM 238 (477)
T ss_pred eEEEecCCCchHH-HHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhc
Confidence 9999999655554 56666 78999999999999999999885 999999999999999999999999999999999999
Q ss_pred cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCC
Q psy15158 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP 595 (709)
Q Consensus 530 ~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~ 595 (709)
|+||.|.|++.|+++.+++++++++++..++++ ++..|++|+...++.- .+++.||......
T Consensus 239 N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~~d 314 (477)
T KOG2456|consen 239 NSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDESD 314 (477)
T ss_pred cCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccchhh
Confidence 999999999999999999999999999999987 7888899998887642 4899999754210
Q ss_pred -----C---------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCC
Q psy15158 596 -----G---------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK 643 (709)
Q Consensus 596 -----g---------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~ 643 (709)
- +++|+|+.||..+-.|++++||+|.....++..++.+|.|.+|+...
T Consensus 315 ~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~ 394 (477)
T KOG2456|consen 315 RYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIM 394 (477)
T ss_pred cccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEE
Confidence 0 99999999999999999999999999999999999999999998543
Q ss_pred --CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 644 --TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 644 --~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
+-...||||.|.||+|+.+|..+...|.+ .|++....
T Consensus 395 H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH---~k~~l~rs 433 (477)
T KOG2456|consen 395 HVTLDSLPFGGVGESGMGRYHGKFSFDTFSH---EKSCLLRS 433 (477)
T ss_pred EEEeeccCcCCcCcccccccccccccccccc---chhhhhcc
Confidence 33468999999999999999998888877 56765443
|
|
| >KOG2453|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-55 Score=445.75 Aligned_cols=420 Identities=27% Similarity=0.509 Sum_probs=381.0
Q ss_pred eecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q psy15158 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELAT 333 (709)
Q Consensus 254 ~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~ 333 (709)
..+|+|. .+|...+.++|++.++|+.|..++.+|.+.++..|++|++ .|-.+|...|.+|.+++.|.|+...+-|-+
T Consensus 23 vy~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k-iw~~vpapkrgeivrqigdalr~klq~lg~ 99 (507)
T KOG2453|consen 23 VYHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK-IWCEVPAPKRGEIVRQIGDALRTKLQNLGK 99 (507)
T ss_pred eeeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH-HHhcCCCCccchHHHHHHHHHHHHHHHHhh
Confidence 3456875 3578899999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHH
Q psy15158 334 IESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMA 413 (709)
Q Consensus 334 l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ia 413 (709)
++++|+||.+.+... ||++-+|.|.|..+..+.+.|..+|.. +|. ......+.|+|+|.+|+.+|||-...-|.-+
T Consensus 100 lvslemgkilaegvg-evqeyvdicdyavglsr~l~g~i~pse--rpg-halleqwnplg~vgvitafnfpcavygwnna 175 (507)
T KOG2453|consen 100 LVSLEMGKILAEGVG-EVQEYVDICDYAVGLSRSLEGKIFPSE--RPG-HALLEQWNPLGVVGVITAFNFPCAVYGWNNA 175 (507)
T ss_pred hhhhhhhhHhhhcch-hHHHHHHHHHHhhhhhhhhCCcccCCC--CCc-hhHHHhcCCcceEEEEEeccCCceeeccCch
Confidence 999999999999985 999999999999999999999888764 343 3345678999999999999999999999999
Q ss_pred HHHHcCCEEEeeCCCCchHHHHHH----HHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 414 PCLAAGNTVVMKPSEVSPLTALKL----AELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 414 pALaaGNtVVlKPs~~tplta~~l----~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
-|+.+||+|+|||++++|+++... .+.|.+--+|++......| +.++++++..+.+++.+.||||+++++.+.+.
T Consensus 176 iaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~ 254 (507)
T KOG2453|consen 176 IAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQ 254 (507)
T ss_pred hhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHH
Confidence 999999999999999999987654 4556566799999998888 57899999999999999999999999999888
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
..+ .+-+..+|+||+|+.||.+|||+..++...+.++...+||+|+.++||+|||++||+++++|+.+.+++
T Consensus 255 vqa-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld 333 (507)
T KOG2453|consen 255 VQA-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLD 333 (507)
T ss_pred HHH-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCC
Confidence 876 456789999999999999999999999999999999999999999999999999999999999998886
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC--------------------------------CHHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------DVDAVI 602 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------dldeaI 602 (709)
.++....++..-++.++++|.++++||+..+++| +++||+
T Consensus 334 ~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ 413 (507)
T KOG2453|consen 334 SNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAI 413 (507)
T ss_pred CCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhh
Confidence 5677788889999999999999999999887666 899999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHH--hcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVD--KIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~--~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
+.-|..+.||+++|||+|...+-++.. .-++|.|.||-++.++ ....|||.|..|-||+.|.+....|+|+ .+.
T Consensus 414 ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrr---stc 490 (507)
T KOG2453|consen 414 AINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRR---STC 490 (507)
T ss_pred eeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhh---cee
Confidence 999999999999999999999999884 4679999999987776 4779999999999999999999999996 577
Q ss_pred EEeccC
Q psy15158 680 FINTYN 685 (709)
Q Consensus 680 ~iN~~~ 685 (709)
++|+..
T Consensus 491 tinysk 496 (507)
T KOG2453|consen 491 TINYSK 496 (507)
T ss_pred eeeccc
Confidence 888753
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=294.95 Aligned_cols=334 Identities=18% Similarity=0.198 Sum_probs=233.6
Q ss_pred hhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHH----cHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHH--H
Q psy15158 287 SDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQ----NKEELATIESLDSGAVYTLALKTHVGMSIDTWK--Y 360 (709)
Q Consensus 287 ~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~----~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr--~ 360 (709)
..++++.+...+...+ .-..++.++..+++.++++.+.. ++.+..+.+..-+|.+...... .+......|+ .
T Consensus 4 ~~~~~~~~~~l~~~~~-~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r~~ 81 (422)
T cd07080 4 APDLDALIEELRLNRR-ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRREN 81 (422)
T ss_pred HHHHHHHHHHHHhhHH-hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCHHH
Confidence 3445555555554443 45667788888887777777652 3344445555556666433221 2222222222 0
Q ss_pred HHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHH
Q psy15158 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440 (709)
Q Consensus 361 ~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~el 440 (709)
.-....+-.+.....+...+.+...++.++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..++++
T Consensus 82 l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~ 160 (422)
T cd07080 82 LERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRS 160 (422)
T ss_pred HHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHH
Confidence 111111111111111112222234578899999999999999999 7899999999999999999999999999999999
Q ss_pred HHHcCCCC----CcEEEe--cCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCc-ccEEEcCC
Q psy15158 441 SVRAGFPK----GVINIL--PGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK-SPLVIFDD 513 (709)
Q Consensus 441 l~eAGlP~----gvv~vv--~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGk-np~IV~~d 513 (709)
|.++ +|+ +.++++ +|.+.++++.|+.++ |.|+||||+++++.|++.++. + +.++|+||| ++.|++++
T Consensus 161 l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~ 234 (422)
T cd07080 161 LADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDRE 234 (422)
T ss_pred HHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHH
Confidence 9999 787 888888 576667899999998 899999999999999998873 3 468999999 55566666
Q ss_pred C----CHHHHHHHHHhhhhccCCCcccCCcEEEEeCcc---HHHHHHHHHHHHHhh--------hcHHHHHHHHHHHHHH
Q psy15158 514 Y----NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI---YDAFLEKVVTEVKKM--------NHKAHLDKLIDYCEKA 578 (709)
Q Consensus 514 A----Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi---~d~fl~~L~~~~~~l--------~~~~~~~~i~~~i~~a 578 (709)
| |++.+++.+++++|.++||.|+|++++|||+++ +++|.++|.++++++ .+.....++...-..+
T Consensus 235 a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r~~~ 314 (422)
T cd07080 235 ALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALSLSAAESAKIARARLEA 314 (422)
T ss_pred hhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 8 999999999999999999999999999999999 999999999999887 1223333333221111
Q ss_pred H----------hcCCEEEECCcc-C-CCCC----------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcC
Q psy15158 579 K----------SEGARLLIGGKR-L-DRPG----------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKID 632 (709)
Q Consensus 579 ~----------~~Ga~vl~GG~~-~-~~~g----------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~ 632 (709)
. ..+.+|++.... . ..+. +++|++..++. |=-|.+++..+.+. .++++++.
T Consensus 315 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 315 EFYELKGGVSRDLGWTVIISDEIGLEASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALA 387 (422)
T ss_pred HHHHHhcCCCCCCCeEEEEeCCCCccCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHH
Confidence 1 112234443221 1 1111 89999999985 77899999988877 56665554
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-28 Score=255.21 Aligned_cols=370 Identities=19% Similarity=0.247 Sum_probs=269.8
Q ss_pred hhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH------hcCChHHHHHh-----hHHHHHHH
Q psy15158 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESL------DSGAVYTLALK-----THVGMSID 356 (709)
Q Consensus 288 ~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~------e~Gk~~~~a~~-----~ev~~aid 356 (709)
.++.+...+|++|.. ....++..+|.+.|.++|+.|++++++|.+..+. +.|.+-..... .-+...++
T Consensus 3 ~~~~~~~~~Ak~A~~-~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~ 81 (417)
T COG0014 3 SELEELGKRAKAASR-KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMAD 81 (417)
T ss_pred hHHHHHHHHHHHHHH-HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHH
Confidence 356777888999987 8999999999999999999999999888765544 34433221100 11223333
Q ss_pred HHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHH
Q psy15158 357 TWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436 (709)
Q Consensus 357 ~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~ 436 (709)
-++-.+...+.+. +.+ ..+..|++...+..|.|+||+++| |-.--.......+-||.+||+||+|.++.+..++..
T Consensus 82 gl~~Va~L~DPvG-ev~-~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~a 157 (417)
T COG0014 82 GLRQVAALPDPVG-EVI-DGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAA 157 (417)
T ss_pred HHHHHhcCCCchH-hhh-ccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHH
Confidence 4443333332221 111 122356778888999999999999 544445556677789999999999999999999998
Q ss_pred HHHHHH----HcCCCCCcEEEecC-CchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEc
Q psy15158 437 LAELSV----RAGFPKGVINILPG-TGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIF 511 (709)
Q Consensus 437 l~ell~----eAGlP~gvv~vv~g-~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~ 511 (709)
++++++ ++|+|++++|+++. +...+.+.|..+..||.|+..|+..--+.+.+ ..-.||+-.+-|++.++|+
T Consensus 158 i~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~----~a~vPVi~~~~G~CHiyvd 233 (417)
T COG0014 158 IVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVE----NATVPVIEHGVGNCHIYVD 233 (417)
T ss_pred HHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHh----CCcCCEEecCcceEEEEec
Confidence 887755 56999999999987 44667788888999999999998865555544 4558999999999999999
Q ss_pred CCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHhcCCEE-
Q psy15158 512 DDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-----NHKAHLDKLIDYCEKAKSEGARL- 585 (709)
Q Consensus 512 ~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-----~~~~~~~~i~~~i~~a~~~Ga~v- 585 (709)
.+||+|.|.+.+++++..+.+ .|+|...|+||+.++++|+..|.+.+... .+.... .++...- .-++-
T Consensus 234 ~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~d~~~~----~~~~~~~-~~A~e~ 307 (417)
T COG0014 234 ESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVELRGDAEAL----ALLPDAV-KPATEE 307 (417)
T ss_pred ccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEcCHHHH----HhccccC-CCCchh
Confidence 999999999999999999998 99999999999999999999999988865 122111 1111100 00000
Q ss_pred EECCccCCC------CCCHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCC
Q psy15158 586 LIGGKRLDR------PGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659 (709)
Q Consensus 586 l~GG~~~~~------~gdldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G 659 (709)
-++-++++. -.++++||+.||..+.+||-+|.|+|.+.+++|.+.+++..||||.++.+....-||=...-|+.
T Consensus 308 Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGIS 387 (417)
T COG0014 308 DWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGIS 387 (417)
T ss_pred hHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEee
Confidence 000000000 01899999999999999999999999999999999999999999999885554444333333332
Q ss_pred ----CccChHHHHHHHH
Q psy15158 660 ----KDLDINKAMYFVD 672 (709)
Q Consensus 660 ----~~~G~~~~~~ftr 672 (709)
...|+-+++.++.
T Consensus 388 TqKlHARGPmGLe~LTs 404 (417)
T COG0014 388 TQKLHARGPMGLEALTS 404 (417)
T ss_pred cCcccCCCCCChhhhcc
Confidence 2336666665555
|
|
| >KOG4165|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=206.58 Aligned_cols=354 Identities=19% Similarity=0.212 Sum_probs=246.4
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHhcCChHHHHHh-----hHHHHHHHHH
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATI------ESLDSGAVYTLALK-----THVGMSIDTW 358 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l------~~~e~Gk~~~~a~~-----~ev~~aid~l 358 (709)
+++....||.+++ ..+.++.++|.++|.+++++|+.+..++... .+.++|.....-.. ..+.....-+
T Consensus 2 ~e~~a~~aR~a~r-~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~ 80 (433)
T KOG4165|consen 2 VEEMAENAREAGR-ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGL 80 (433)
T ss_pred HHHHHHHHHHHhh-HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHH
Confidence 3456678899997 8999999999999999999999887776433 23455533221110 0111112222
Q ss_pred HHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHH
Q psy15158 359 KYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLA 438 (709)
Q Consensus 359 r~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ 438 (709)
+-.|. .....|+.+.- ....++...+....|+||.++| |...--.+..-.+-|++.||.+++|....+..+...+.
T Consensus 81 ~~ia~-~edpvGRVl~~-~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 81 RQIAE-LEDPVGRVLKK-TRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHh-cccchhhheee-eeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 32332 11222221110 1112345556778899999999 54433344444566899999999999999999999888
Q ss_pred HHHHHc----CCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCC
Q psy15158 439 ELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDY 514 (709)
Q Consensus 439 ell~eA----GlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dA 514 (709)
++..+| |.|.+.+++|..+ +++.+.|..+..||.|+..||+.--|.|... +..||.....|.+.++|++||
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~sR-Eev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTSR-EEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHhhhccCchhhhhheecH-HHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEecccc
Confidence 887776 7799999999875 6899999999999999999999888877663 458999999999999999999
Q ss_pred CHHHHHHHHHhhhhccCCCcccCCcEEEEeCcc-----HHHHHHHHHHHHHhh-hcHHHHHHHHHHH----HHHHhcCCE
Q psy15158 515 NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI-----YDAFLEKVVTEVKKM-NHKAHLDKLIDYC----EKAKSEGAR 584 (709)
Q Consensus 515 Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi-----~d~fl~~L~~~~~~l-~~~~~~~~i~~~i----~~a~~~Ga~ 584 (709)
|++.|.+-+..+++.+.. .|+|...|++|++. ++.++.+|+++--++ ..++ +..+.++- ++-..+=..
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpk-l~~~l~~~p~e~~s~~~Ey~~ 309 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPK-LAALLKFSPPEAKSFNTEYGS 309 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChh-HHhhcCcCCchhhhhhhhhcc
Confidence 999999999999999976 89999999999973 334443333222222 1111 11111110 000000001
Q ss_pred EEECCccCCCCCCHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCC
Q psy15158 585 LLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGF 658 (709)
Q Consensus 585 vl~GG~~~~~~gdldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~ 658 (709)
+.|--+..+ ++++||+.||..+.++|-+|.|+|.+.++.|...+++..||.|..+.++...-||=.-.-|+
T Consensus 310 l~~~ievV~---~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGI 380 (433)
T KOG4165|consen 310 LECTIEVVD---SVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGI 380 (433)
T ss_pred hheeeeecc---cHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeee
Confidence 111111111 89999999999999999999999999999999999999999999988777666654444444
|
|
| >PF02911 Formyl_trans_C: Formyl transferase, C-terminal domain; InterPro: IPR005793 Methionyl-tRNA formyltransferase (2 | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-17 Score=147.17 Aligned_cols=91 Identities=32% Similarity=0.474 Sum_probs=77.1
Q ss_pred cceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--C-CCCceeeccCCCCCceeeCCceEEEeCC
Q psy15158 8 ISITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--N-IEGTPVTVEGSDTPAILHPDGLLFTGSD 84 (709)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (709)
.+++.|||+++|++|||+||||+|+|||||.++|+++||+++++.+.. . .+|+++.++ +++|+|.|.|
T Consensus 4 ~~d~~Idw~~~A~~I~~~vRal~p~pga~~~~~~~~i~i~~~~~~~~~~~~~~pG~i~~~~---------~~~l~V~~~d 74 (100)
T PF02911_consen 4 KEDGRIDWNQSAEEIYNLVRALNPYPGAFTTFNGKRIKILKAEPLEDDSSSNPPGTIVYID---------KNGLLVACGD 74 (100)
T ss_dssp GGGGB--TTSBHHHHHHHHHHTTTTT-EEEEETTEEEEEEEEEEEETTSSSSSTTBEEEEE---------TTEEEEETSB
T ss_pred hHHeEECCCCCHHHHHHHHhCCCCCCCEEEeeCCeEEEEEeeeecccccccccCceEEEEc---------CCEEEEEECC
Confidence 488999999999999999999999999999999999999999987654 1 266666655 6799999999
Q ss_pred CceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhccc
Q psy15158 85 GQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKE 139 (709)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 139 (709)
| .| .|.+|| +|+|+|+|.+|.++
T Consensus 75 g-~l-------------------------------~i~~~q~~gkk~~~a~~f~~g 98 (100)
T PF02911_consen 75 G-AL-------------------------------RIRELQPEGKKPMSAKDFLNG 98 (100)
T ss_dssp S-EE-------------------------------EEEEEEETTS-EEEHHHHHHH
T ss_pred c-EE-------------------------------EEEEEEcCCCCEEeHHHHHcc
Confidence 9 89 999999 99999999999875
|
1.2.9 from EC) transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. This family also includes formyltetrahydrofolate dehydrogenases, which produce formate from formyl-tetrahydrofolate. These enzymes contain an N-terminal domain in common with other formyl transferase enzymes (IPR002376 from INTERPRO). The C-terminal domain has an open beta-barrel fold [].; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3RFO_D 1Z7E_C 2BLN_A 1YRW_A 1FMT_A 2FMT_B 3Q0I_A 3R8X_A 3TQQ_A 2BW0_A .... |
| >COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.5e-16 Score=166.15 Aligned_cols=98 Identities=26% Similarity=0.412 Sum_probs=87.7
Q ss_pred cccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--CCCCceeeccCCCCCceeeCCce
Q psy15158 3 QFDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--NIEGTPVTVEGSDTPAILHPDGL 78 (709)
Q Consensus 3 ~~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (709)
-|+.++ ++++|||++++++|+|+|||++|||||||.++|+++|||.+.+.+.. ..+|+++.+. ++|+
T Consensus 200 tya~ki~ked~~Idw~~~a~~i~n~IRa~~P~Pga~~~~~~~~iki~~a~~~~~~~~~~pG~i~~~~---------~~~l 270 (307)
T COG0223 200 TYAPKITKEDGRIDWSKPAAQILNKIRAFNPWPGAWTELGGKRIKIWEARVLEGASNGKPGEILAAD---------KKGL 270 (307)
T ss_pred ccccCCCHHHcccCCccCHHHHHHHHhccCCCCceEEEECCeEEEEEEEEEccccccCCCcceEEec---------CCcE
Confidence 377777 89999999999999999999999999999999999999999997655 4567776666 7899
Q ss_pred EEEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccCC
Q psy15158 79 LFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEKD 141 (709)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 141 (709)
+|.|++| .| ++.++| +|||.|++.+|.++..
T Consensus 271 ~Va~~~g-~l-------------------------------~l~~lQ~~gkk~~~~~~~l~g~~ 302 (307)
T COG0223 271 LVACGDG-AL-------------------------------RLTELQPAGKKAMSAADFLNGRR 302 (307)
T ss_pred EEEeCCc-eE-------------------------------EEEeeccCCCCCCCHHHHhcccc
Confidence 9999998 89 999999 9999999999998743
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-12 Score=140.36 Aligned_cols=315 Identities=16% Similarity=0.148 Sum_probs=206.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHc--HHHHHHHHHHhcCChHHHHHhhHHHHHHHHH-----HHHHHHHHhhhCccccccCCC
Q psy15158 307 RLSARDRGHLMFKLADLMEQN--KEELATIESLDSGAVYTLALKTHVGMSIDTW-----KYFAGWCDKILGSTIPIAHAR 379 (709)
Q Consensus 307 ~~s~~eR~~iL~r~AdlL~~~--~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~l-----r~~a~~~~~~~g~~~p~~~~~ 379 (709)
.+|.++..++|.++++.+... .....+.+..-+|.+...... +......| +..... ++ +.....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~--l~~~~~~~~r~~L~~~l~~--el-~~~~~Ld~~~ 76 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY--LEALMRWFRRENLERKLER--EL-GNPESLDGWV 76 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH--HHHHHHhcCHHHHHHHHHH--hc-CCHhHhhccc
Confidence 456677777777777766642 122444455556665443321 22222222 111111 12 2221122222
Q ss_pred CCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCC----CcEEEe-
Q psy15158 380 PNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPK----GVINIL- 454 (709)
Q Consensus 380 ~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~----gvv~vv- 454 (709)
+.. ..+..+.|+|+++.|.|.|-|+..+. .++-+|.+||..|+|+|+..|.++..|++.|.+. .|. ..+.++
T Consensus 77 ~~~-~~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~ 153 (399)
T PF05893_consen 77 PRG-DGYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVY 153 (399)
T ss_pred ccc-cchhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEE
Confidence 332 25678999999999999999998765 4556677999999999999999999999999887 554 335555
Q ss_pred -cCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCC
Q psy15158 455 -PGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGE 533 (709)
Q Consensus 455 -~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ 533 (709)
++...++.+.+..+ .|+|+.+||.++.+.|.+.+ .+.++.+....-.+..+++.+++++.+++.+....|.+.+|
T Consensus 154 ~~~~d~~~~~~~~~~--~D~vv~wGgd~ti~~ir~~~--~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~ 229 (399)
T PF05893_consen 154 WPGGDEELEEALSQQ--ADAVVAWGGDETIRAIRQPL--PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQ 229 (399)
T ss_pred ecCCchHHHHHHHHH--CCEEEEeCCHHHHHHHHHHc--CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCc
Confidence 55556777777755 57999999999999999844 35677888888889999999999999999999999999999
Q ss_pred cccCCcEEEEe---CccHHHHHHHHHHHHHhh--------hcHHHHHHHHHHHH-----HHHhcCCEEEECC--------
Q psy15158 534 NCISAGRIFVD---SNIYDAFLEKVVTEVKKM--------NHKAHLDKLIDYCE-----KAKSEGARLLIGG-------- 589 (709)
Q Consensus 534 ~C~A~~rl~V~---esi~d~fl~~L~~~~~~l--------~~~~~~~~i~~~i~-----~a~~~Ga~vl~GG-------- 589 (709)
.|+|++.|||. ..-.++|.++|.+++.+. .+......+....+ .+...+.++..+.
T Consensus 230 aCsSp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~ 309 (399)
T PF05893_consen 230 ACSSPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIV 309 (399)
T ss_pred ccCCCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEE
Confidence 99999999999 344578888887777665 22222233333222 2333333344211
Q ss_pred --c--cCCCCC----------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHH-hcCee
Q psy15158 590 --K--RLDRPG----------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVD-KIDSG 634 (709)
Q Consensus 590 --~--~~~~~g----------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~-~l~aG 634 (709)
. ....+. +++|++..++....=-|.+++... .....+++ -...|
T Consensus 310 ~~~~~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 310 SPEPPLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred CCCcccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 1 001111 899999999875212577887554 34444444 34455
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >TIGR00460 fmt methionyl-tRNA formyltransferase | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.8e-14 Score=149.29 Aligned_cols=96 Identities=24% Similarity=0.326 Sum_probs=81.3
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC---CCCCceeeccCCCCCceeeCCce
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA---NIEGTPVTVEGSDTPAILHPDGL 78 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 78 (709)
|..++ +++.|||+.++++|+|+|||++|||||||.++|+++||++++..+.. ..+|+++.++ ++|+
T Consensus 200 y~~k~~~~d~~Idw~~~a~~I~~~iRA~~p~pga~~~~~g~~i~i~~a~~~~~~~~~~~pG~v~~~~---------~~~~ 270 (313)
T TIGR00460 200 YAPKISKEQERIDWNQSAEELLNKIRALNPWPTAWLTFEGKNIKIHKAKVIDLSTYKAKPGEIVYHN---------KKGI 270 (313)
T ss_pred ECCCCCHHHeeECccCCHHHHHHHHhccCCCCceEEEECCEEEEEEEEEEccCCCCCCCCCEEEEeC---------CCeE
Confidence 55544 78999999999999999999999999999999999999998875432 1345555444 5789
Q ss_pred EEEeC-CCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 79 LFTGS-DGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 79 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
+|+|+ || .| .|.++| +|||+|++.+|++|.
T Consensus 271 ~V~~~~dg-~l-------------------------------~i~~lq~~Gkk~~~a~~f~~g~ 302 (313)
T TIGR00460 271 LVACGKDG-IL-------------------------------LLLSLQPPGKKVMRAEDFYNGS 302 (313)
T ss_pred EEEEcCCC-EE-------------------------------EEEEEeCCCCCcCcHHHHHcCC
Confidence 99999 77 78 999999 999999999999874
|
The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met. |
| >PRK00005 fmt methionyl-tRNA formyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-13 Score=143.88 Aligned_cols=96 Identities=25% Similarity=0.478 Sum_probs=81.8
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--CCCCceeeccCCCCCceeeCCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--NIEGTPVTVEGSDTPAILHPDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (709)
|..++ ++..|||+.++++|+|+|||++||||||+.++|+++||++++..+.. ..+|+++.++ ++|++
T Consensus 200 y~~k~~~~d~~Idw~~~a~~I~~~iRA~~p~pga~~~~~g~~v~i~~a~~~~~~~~~~pG~i~~~~---------~~~~~ 270 (309)
T PRK00005 200 YAPKISKEEARIDWSKPAAELENHIRGFNPWPGAWTELDGQRLKILEAELVEASGSGAPGTILAID---------KDGIV 270 (309)
T ss_pred ECCCCCHHHeeEcCCCCHHHHHHHHhcCCCCCceEEEECCEEEEEEEEEEccCCCCCCCCEEEEec---------CCeEE
Confidence 55555 88999999999999999999999999999999999999999875421 2345554444 67899
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|+|.|| .| .|.++| +|||.|++.+|.++.
T Consensus 271 V~~~dg-~l-------------------------------~i~~l~~~g~k~~~~~~f~~g~ 300 (309)
T PRK00005 271 VATGEG-AL-------------------------------RLTQLQPPGKKPMSAADFLNGR 300 (309)
T ss_pred EEECCe-eE-------------------------------EEEEEECCCCCcccHHHHhcCC
Confidence 999999 79 999999 999999999999874
|
|
| >PLN02285 methionyl-tRNA formyltransferase | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.9e-13 Score=142.48 Aligned_cols=100 Identities=20% Similarity=0.354 Sum_probs=80.1
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEEC------C----eEEEEEEEEecccCCCCCceeeccCCCCCc
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLN------G----IEVKVFASSMWEDANIEGTPVTVEGSDTPA 71 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (709)
|+.++ +++.|||++++++|||+|||++||||||+.++ | .++|++.++..+... .+...||
T Consensus 217 ya~k~~~~d~~Idw~~~a~~I~~~iRa~~p~Pga~~~~~~~~~~~~~~~~~~iki~~~~~~~~~~--------~~~~~~g 288 (334)
T PLN02285 217 HAPKISPEESWLSFDEEARVLHNKVRAFAGWPGTRAKFQLVDDGDGEREVLELKIITTRVCEAGG--------EQTGSAD 288 (334)
T ss_pred ECCCCCHHHeEEcCCCCHHHHHHHHhcCCCCCcEEEEEccccccCCcccceeEEEEEEEEecccc--------ccCCCCc
Confidence 66666 89999999999999999999999999999995 5 389999887632110 0012344
Q ss_pred ee--eCCceEEEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccCCC
Q psy15158 72 IL--HPDGLLFTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEKDS 142 (709)
Q Consensus 72 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 142 (709)
.+ .++|++|.|.||..| .|.+|| +|||+|++.+|.+|...
T Consensus 289 ~~~~~~~~l~V~c~dg~~l-------------------------------~i~~lq~~Gkk~m~~~~f~~G~~~ 331 (334)
T PLN02285 289 AVTFKKDSLLVPCGGGTWL-------------------------------EVLEVQPPGKKVMKAKDFWNGLRG 331 (334)
T ss_pred EEEEeCCeEEEEeCCCCEE-------------------------------EEEEEECCCCCCCcHHHHhcCCCC
Confidence 43 378999999999558 999999 99999999999988544
|
|
| >PRK06988 putative formyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-12 Score=140.59 Aligned_cols=102 Identities=18% Similarity=0.239 Sum_probs=80.9
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCC-CCcceEEEECCeEEEEEEEEecccCCCCCceeeccCCCCCcee-eCCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLD-SSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAIL-HPDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~-~~p~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (709)
|+.++ +++.|||++++++|+|+|||++ |||||||.++|+++||++++........ .....||.+ .++|++
T Consensus 199 y~~k~~~~d~~Idw~~~a~~I~~~iRA~~~p~pga~~~~~g~~v~i~~a~~~~~~~~~------~~~~~pG~i~~~~~l~ 272 (312)
T PRK06988 199 YFGGRKPEDGRIDWSKPAAQVYNLIRAVAPPYPGAFTDLGGTRFVVARARLAAPGAAA------ARDLPPGLHVSDNALF 272 (312)
T ss_pred ECCCCChHHeEECCCCCHHHHHHHhccCCCCCCeeEEEECCEEEEEEEEEEccCCccc------ccCCCCCEEEECCCEE
Confidence 55555 8899999999999999999996 9999999999999999998874321100 001246644 378899
Q ss_pred EEeCCCc---eeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccCCC
Q psy15158 80 FTGSDGQ---KVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEKDS 142 (709)
Q Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 142 (709)
|.|+||+ .+ .|.++| +|||+|++.+|.++-.|
T Consensus 273 V~c~dg~~v~~l-------------------------------~i~~~q~~gkk~~~~~~f~~~~~~ 308 (312)
T PRK06988 273 GVCGDGRAVSIL-------------------------------ELRRQQDGGETVVTPAQFAQFIHS 308 (312)
T ss_pred EECCCCCCcceE-------------------------------EEEEEEcCCCCcCCHHHHhhhccc
Confidence 9999995 45 889999 99999999999987444
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.6e-11 Score=143.42 Aligned_cols=95 Identities=17% Similarity=0.289 Sum_probs=79.4
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCC-CCcceEEEECCeEEEEEEEEecccCCCCCceeeccCCCCCcee-eCCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLD-SSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAIL-HPDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~-~~p~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (709)
|..++ +++.|||++++++|+|+|||++ |||||||.++|+++||+++++.+.. ....||.+ ..++++
T Consensus 197 y~~~~~~~d~~Idw~~~a~~i~~~iRa~~~p~pga~~~~~g~~~~i~~a~~~~~~----------~~~~pG~i~~~~~~~ 266 (660)
T PRK08125 197 YFGRRTPADGLIDWHKPASTLHNLVRAVTDPWPGAFSYVGEQKFTVWSSRVLPDA----------SGAQPGTVLSVAPLR 266 (660)
T ss_pred eCCCCCHHHeEECCCCCHHHHHHHHhhcCCCCCceEEEECCEEEEEEEEEEccCC----------CCCCCCEEEEeCCEE
Confidence 55555 8899999999999999999997 9999999999999999999874321 11245533 235699
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|.|.|| .| .|.++| +|||.|++.+|.++.
T Consensus 267 v~~~dg-~l-------------------------------~i~~~q~~g~~~~~~~~~~~g~ 296 (660)
T PRK08125 267 IACGEG-AL-------------------------------EIVTGQAGDGLYMQGSQLAQEL 296 (660)
T ss_pred EEeCCc-EE-------------------------------EEEEEECCCCCccCHHHHhcCC
Confidence 999999 79 999999 999999999999884
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.7e-09 Score=132.16 Aligned_cols=108 Identities=14% Similarity=0.057 Sum_probs=89.0
Q ss_pred CCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCc
Q psy15158 379 RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTG 458 (709)
Q Consensus 379 ~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g 458 (709)
.|.|+.+.++..|+|+|+||+||| ..++.++++||++||+||+||+++++- . -+.+|..+.+.+
T Consensus 1066 GPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~---- 1129 (1208)
T PRK11905 1066 GPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI---- 1129 (1208)
T ss_pred CCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc----
Confidence 577888999999999999999999 668889999999999999999999762 1 123566555544
Q ss_pred hhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCC--CcEEEcCC
Q psy15158 459 AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL--KKVSLELG 503 (709)
Q Consensus 459 ~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~--k~v~lElG 503 (709)
.++..+..+++|++|.||||+++.+.|.++++++.+ .|++.|+.
T Consensus 1130 -~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 -DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred -ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 345578888999999999999999999999998754 56777765
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.2e-07 Score=90.65 Aligned_cols=131 Identities=17% Similarity=0.326 Sum_probs=102.0
Q ss_pred ccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHh
Q psy15158 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-----NHKAHLDKLIDYCEKAKS 580 (709)
Q Consensus 506 np~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-----~~~~~~~~i~~~i~~a~~ 580 (709)
.-|||++|.|++.|+..++.+.-.--| ..+...++|||++.|+|+++++..++.+ .++. +.+-.+.++ .
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~~~va~Hpn-y~rsl~~i~---~ 79 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLSPQVANHPN-YLRSLKKIK---C 79 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCChhhccCcH-HHHHHHHHH---h
Confidence 458999999999999999999865544 4588899999999999999999999988 2222 344444443 3
Q ss_pred cCCEEEECCccCC-------------------CC-C--------CHHHHHHHHhcC--CCCCeEEEEccchHHHHHHHHh
Q psy15158 581 EGARLLIGGKRLD-------------------RP-G--------DVDAVIKRANST--EYGLASGIFTSDINKAMYFVDK 630 (709)
Q Consensus 581 ~Ga~vl~GG~~~~-------------------~~-g--------dldeaI~~~N~t--~yGLta~V~T~d~~~a~~va~~ 630 (709)
-+++++.++.... .| | +..||+++++.- .|+ +.+||++-.+.+..++.+
T Consensus 80 l~~~~I~~~~~~~~~~aSPilV~d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~ 158 (215)
T PF07368_consen 80 LNAKTIVADFENVPPPASPILVCDFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAAR 158 (215)
T ss_pred cCCeEEEecccCCCCCCCCEEEcCCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHh
Confidence 5667776632111 01 0 899999999863 554 899999999999999999
Q ss_pred cCeeeEEEcCCCC
Q psy15158 631 IDSGTVFINTYNK 643 (709)
Q Consensus 631 l~aG~V~VN~~~~ 643 (709)
++..++|||+...
T Consensus 159 l~~~~f~iNC~~V 171 (215)
T PF07368_consen 159 LPCDTFYINCFNV 171 (215)
T ss_pred CCCCEEEEEeccC
Confidence 9999999999754
|
The function of this family is unknown. |
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=98.01 E-value=6.1e-06 Score=67.83 Aligned_cols=63 Identities=32% Similarity=0.555 Sum_probs=57.5
Q ss_pred HHHHHHHhhhcc---cCcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHh
Q psy15158 157 PVLKTIWAGILN---SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIK 219 (709)
Q Consensus 157 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~ 219 (709)
++++.+|+.+|. .+|+.+++||..|..|+++++|+.++++.+++++...+++.+++..++.+.
T Consensus 1 e~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~ 66 (67)
T PF00550_consen 1 EQLREIIAEVLGVDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEY 66 (67)
T ss_dssp HHHHHHHHHHHTSSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHH
T ss_pred CHHHHHHHHHHCcCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhH
Confidence 468999999997 489999999999999999999999999999999999999999988887653
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0023 Score=80.55 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=79.4
Q ss_pred CCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCc
Q psy15158 379 RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTG 458 (709)
Q Consensus 379 ~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g 458 (709)
+|.|+.+.++..|+|+|+|+.+- ......+++++|++||.||+..++. .. +++ +++|+.|.+.+.-.
T Consensus 1175 GPTGE~N~l~l~pRg~vLcl~~~---~~~~~~Ql~Aala~Gn~~v~~~~~~---~~----~~~--~~Lp~~v~~~v~~~- 1241 (1318)
T PRK11809 1175 GPTGERNTYTLLPRERVLCLADT---EQDALTQLAAVLAVGSQALWPDDAL---HR----ALV--AALPAAVQARIQLA- 1241 (1318)
T ss_pred CCCCCcceeeccCCCcEEEeCCC---HHHHHHHHHHHHHhCCEEEEeCCch---hH----HHH--HhccHHHHhHhhhc-
Confidence 56788889999999999999883 3357889999999999998864443 21 122 57899888865321
Q ss_pred hhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEE
Q psy15158 459 AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSL 500 (709)
Q Consensus 459 ~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~l 500 (709)
.........+++|.|.|..+..+.+.+++|++.+.-+.+
T Consensus 1242 ---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv~l 1280 (1318)
T PRK11809 1242 ---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIVSV 1280 (1318)
T ss_pred ---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeEEe
Confidence 122334466899999999999999999999887654444
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.45 Score=53.10 Aligned_cols=255 Identities=18% Similarity=0.208 Sum_probs=118.9
Q ss_pred CCceeeeecccCEEEEECCCC-chHHH-HHHHHHHHHHcCC--EEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCC
Q psy15158 382 SNFTFTKREPIGVCGLITPWN-YPLMM-LSWKMAPCLAAGN--TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGT 457 (709)
Q Consensus 382 ~~~~~~~~~P~GVv~~I~PwN-fPl~~-~~~~iapALaaGN--tVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~ 457 (709)
|.....++.|+--|++..|.- +|+.. ++...+||-.+|. .|+.-|....-...-.+.-.++.+|+-+ +..-.
T Consensus 97 G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~vG 172 (412)
T PF00815_consen 97 GVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKVG 172 (412)
T ss_dssp TEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE--
T ss_pred CcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEecc
Confidence 344567788999999999943 44332 3345678898986 4555665542223333445566677643 22222
Q ss_pred chhHHHHHHh----CCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc--cEEEcCCCCHHHHHHHHHhhhhccC
Q psy15158 458 GAVTGEAISQ----HLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS--PLVIFDDYNLDKAVRMSMGGVFFNK 531 (709)
Q Consensus 458 g~~~g~~L~~----~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn--p~IV~~dADle~Aa~~iv~saf~~~ 531 (709)
|...-.+|.- -|.||+|.=.|..-+... |.... ...-+= -+-|-+ .+|.|++||++.++.+++.-+=+..
T Consensus 173 GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~A--K~~v~-g~V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~ 248 (412)
T PF00815_consen 173 GAQAIAALAYGTETIPKVDKIVGPGNAYVTAA--KRLVF-GDVGID-MIAGPSEVLVIADETANPEFVAADLLAQAEHDP 248 (412)
T ss_dssp HHHHHHHHHH--SSS---SEEE---SHHHHHH--HHHHH-HS-EES-------EEEEEE-TTS-HHHHHHHHHHHHTT-T
T ss_pred cHHHHHHHHcCCCCCCceeEEECCCcHHHHHH--HHHhc-CCcccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhccCC
Confidence 4433344433 488999999998755432 22211 001110 112222 2445678999999999998775554
Q ss_pred CCcccCCcEEEEeCccHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCHHHHHHHHhcCCC
Q psy15158 532 GENCISAGRIFVDSNIYDAFLEKVVTEVKKM-NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEY 610 (709)
Q Consensus 532 GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~gdldeaI~~~N~t~y 610 (709)
. .+.++|..+ +++.+.+.+++.+. ..-.+ .+.++.+.+.|.-+++ .|++|+++++|..-
T Consensus 249 ~-----a~~vLvt~s--~~la~~V~~~v~~~l~~l~r----~~i~~~sl~~g~ii~~--------~~l~ea~~~~N~~A- 308 (412)
T PF00815_consen 249 D-----AQAVLVTTS--EELAEAVEAEVERQLEELPR----REIAEKSLENGAIIVV--------DSLEEAIELANEYA- 308 (412)
T ss_dssp T------EEEEEES---HHHHHHHHHHHHHHHTT-TT----HHHHHHHHTT-EEEE---------SSHHHHHHHHHHH--
T ss_pred C-----CceEEEECC--HHHHHHHHHHHHHHHHhCCc----hHHHHHHHHCCeEEEE--------CCHHHHHHHHHHhh-
Confidence 3 344666665 45565655555533 11011 1344555565533332 27899999999732
Q ss_pred CCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---------CCCCCCCCCCCCCCCCCccChHHHHHHHH
Q psy15158 611 GLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---------TDVAAPFGGFKQSGFGKDLDINKAMYFVD 672 (709)
Q Consensus 611 GLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---------~~~~~PFGG~k~SG~G~~~G~~~~~~ftr 672 (709)
.==..|.++|.. .+..++ ++|.|++..++. ....+|-+|.. |..|+-....|++
T Consensus 309 PEHLel~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~G~A-----R~~sgLsv~~FlK 372 (412)
T PF00815_consen 309 PEHLELQVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTGGTA-----RFSSGLSVDDFLK 372 (412)
T ss_dssp -SEEEEESTTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS------TTGG-----GT---S-GGGGEE
T ss_pred HHHHHHHHcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCCccc-----cccCCCcHHHccc
Confidence 123678888873 444555 499999998653 22356776644 4445444556655
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.45 E-value=1.6 Score=48.51 Aligned_cols=259 Identities=19% Similarity=0.211 Sum_probs=140.7
Q ss_pred CCceeeeecccCEEEEECCCC-chHHH-HHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCC
Q psy15158 382 SNFTFTKREPIGVCGLITPWN-YPLMM-LSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGT 457 (709)
Q Consensus 382 ~~~~~~~~~P~GVv~~I~PwN-fPl~~-~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~ 457 (709)
|.....++.|+--|++..|.- +|+.. ++...+||-.+|+. |+.-|....-...-.+.-..+.+|+-+ +..-.
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e----iy~vG 158 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE----IYKVG 158 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE----EeccC
Confidence 455567888999999999964 44333 33456788889874 455666421111122222345566543 33222
Q ss_pred chhHHHHHH----hCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc-cEEEcCCCCHHHHHHHHHhhhhccCC
Q psy15158 458 GAVTGEAIS----QHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS-PLVIFDDYNLDKAVRMSMGGVFFNKG 532 (709)
Q Consensus 458 g~~~g~~L~----~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn-p~IV~~dADle~Aa~~iv~saf~~~G 532 (709)
|...-.+|. .-|.|++|.=.|..-+.. .|.... ...-+=+--|-.- .+|.|++||++.++.+++.-+=+..
T Consensus 159 GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~- 234 (390)
T cd06572 159 GAQAIAALAYGTETIPKVDKIVGPGNIYVTA--AKRLVS-GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDP- 234 (390)
T ss_pred CHHHHHHHHcCCcCCCCCCEeeCCchHHHHH--HHHHhc-CCcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCC-
Confidence 444444443 378899998888764432 222111 1011111112222 2444667999999999997664432
Q ss_pred CcccCCcEEEEeCccHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCHHHHHHHHhcCCCC
Q psy15158 533 ENCISAGRIFVDSNIYDAFLEKVVTEVKKMN-HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYG 611 (709)
Q Consensus 533 Q~C~A~~rl~V~esi~d~fl~~L~~~~~~l~-~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~gdldeaI~~~N~t~yG 611 (709)
..+.++|..+ .++.+++.+++.+.. .-.+. +.++.+....+.++.- .|++|+++++|..- .
T Consensus 235 ----~a~aiLvT~s--~~la~~V~~~v~~ql~~l~r~----~~~~~~~~~~g~ii~~-------~~~~eai~~~N~~A-P 296 (390)
T cd06572 235 ----DSQAILVTTS--EELAEAVEEEVERQLAELPRR----EIAAKSLLDYGAIILV-------DDLEEAIELANEYA-P 296 (390)
T ss_pred ----CCeEEEEECC--HHHHHHHHHHHHHHHHhCCcH----HHHHHHHHhCCEEEEE-------CCHHHHHHHHHhhc-h
Confidence 2344566554 344555544444320 00001 1333344342333321 27899999999742 1
Q ss_pred CeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 612 LASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 612 Lta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
--.-|+++|... +..++ ++|.|++-.++. ++ ..+|.|| +.|..|+-....|++++
T Consensus 297 EHLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~G-----~Ar~~sgL~v~~F~K~~ 361 (390)
T cd06572 297 EHLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTGG-----TARFYSGLSVDDFLKRI 361 (390)
T ss_pred hhheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCCCc-----ceeecCCCCHHHheecc
Confidence 235678888754 44444 599999987643 22 2456665 44555666666888753
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.36 E-value=2 Score=48.12 Aligned_cols=256 Identities=16% Similarity=0.210 Sum_probs=143.1
Q ss_pred CCCceeeeecccCEEEEECCC-CchHHH-HHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecC
Q psy15158 381 NSNFTFTKREPIGVCGLITPW-NYPLMM-LSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPG 456 (709)
Q Consensus 381 ~~~~~~~~~~P~GVv~~I~Pw-NfPl~~-~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g 456 (709)
+|...-.++.|+--|++..|. .+|+.. ++...+||-.+|.. |+.-|..........|+ ..+.+|+-. +..-
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE----IYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe----ehhc
Confidence 344455678899999999996 344332 34467889999974 44556543212222233 446676543 3222
Q ss_pred CchhHHHHHH----hCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc--cEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 457 TGAVTGEAIS----QHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS--PLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 457 ~g~~~g~~L~----~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn--p~IV~~dADle~Aa~~iv~saf~~ 530 (709)
.|...-.+|. .-|.||+|.=.|..-+.. .|.... ...-+= -+-|-+ .+|-|++||++.++.+++.-+=+.
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g~V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAE--AKRQLF-GRVGID-LFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-CccCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 2333333443 367899999888765432 122110 100010 112222 234466799999999999776544
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHH--HHHHHHHHhc-CCEEEECCccCCCCCCHHHHHHHHhc
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKL--IDYCEKAKSE-GARLLIGGKRLDRPGDVDAVIKRANS 607 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i--~~~i~~a~~~-Ga~vl~GG~~~~~~gdldeaI~~~N~ 607 (709)
.. .+.++|..+ .++.+++.+++.+. +..+ .+.++.+++. |.-+++ .|++|+++++|.
T Consensus 256 ~~-----a~~iLvT~s--~~la~~V~~~v~~q-----l~~l~r~~i~~~sl~~~g~ii~v--------~~l~ea~~~~N~ 315 (426)
T PRK12447 256 PN-----SPAVLITTS--RKLAEEVLAEIERL-----LAILPTADVASAAWRDYGEVILC--------DDLEEMVAEADR 315 (426)
T ss_pred CC-----CceEEEECC--HHHHHHHHHHHHHH-----HHhCCHHHHHHHHHHhCCEEEEE--------CCHHHHHHHHHh
Confidence 32 344566544 34455554444432 1111 1344555555 433343 278999999997
Q ss_pred CCCCCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 608 TEYGLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 608 t~yGLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
.-- -=.-|.++|.. .+..++ ++|.|++-.++. ++ ..+|-|| +.|..|+-....|++++
T Consensus 316 ~AP-EHLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~Ar~~sgLsv~~FlK~~ 383 (426)
T PRK12447 316 YAS-EHVQVMTEDPD---WFLENMTNYGALFLGERTNVAYGDKVIGTNHVLPTSG-----AARYTGGLWVGKFLKTV 383 (426)
T ss_pred hCh-HheeehhCCHH---HHHhhcCccceeccCCCCchhhhhcccCCCcccCCCc-----ceeecCCCcHHHhccce
Confidence 421 12458888873 444455 499999976643 22 2345544 55666777777888853
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=1.9 Score=48.10 Aligned_cols=254 Identities=14% Similarity=0.179 Sum_probs=140.7
Q ss_pred CceeeeecccCEEEEECCC-CchHHH-HHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCc
Q psy15158 383 NFTFTKREPIGVCGLITPW-NYPLMM-LSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTG 458 (709)
Q Consensus 383 ~~~~~~~~P~GVv~~I~Pw-NfPl~~-~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g 458 (709)
.....+..|+--|++..|. .+|+.. ++....||-.+|+. |+.-|+....... .+.-..+.+|+-. +..-.|
T Consensus 102 v~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p-~iL~Aa~~~Gv~e----Iy~iGG 176 (416)
T PRK13770 102 VECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQ-EVLAACYITQVNQ----VFQVGG 176 (416)
T ss_pred cEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCH-HHHHHHHHcCCCe----eeccCC
Confidence 4445678899999999996 344332 34467889999985 4445654311122 2223445666543 222223
Q ss_pred hhHHHHHH----hCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc--cEEEcCCCCHHHHHHHHHhhhhccCC
Q psy15158 459 AVTGEAIS----QHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS--PLVIFDDYNLDKAVRMSMGGVFFNKG 532 (709)
Q Consensus 459 ~~~g~~L~----~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn--p~IV~~dADle~Aa~~iv~saf~~~G 532 (709)
...-.+|. .-|.||+|.=.|..-+.. .|.... ...-+=+ .-|-+ .+|-|++||++.++.+++.-+=+...
T Consensus 177 AQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~-~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~ 252 (416)
T PRK13770 177 AQSIAALTYGTETIPKVDKIVGPGNQFVAY--AKKYLF-GQVGIDQ-IAGPTEIALIIDETADLDAIVYDVFAQAEHDEL 252 (416)
T ss_pred HHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-CCcCcCC-CCCCceeEEEecCCCCHHHHHHHHHHHhccCCC
Confidence 33333442 367899998888765432 122110 1011101 12222 24446679999999999977644432
Q ss_pred CcccCCcEEEEeCc--cHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhc-CCEEEECCccCCCCCCHHHHHHHHhcCC
Q psy15158 533 ENCISAGRIFVDSN--IYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSE-GARLLIGGKRLDRPGDVDAVIKRANSTE 609 (709)
Q Consensus 533 Q~C~A~~rl~V~es--i~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~-Ga~vl~GG~~~~~~gdldeaI~~~N~t~ 609 (709)
.+.++|-.+ ++++..+.+...+..+.. .+.++.+++. |.-+++ .|++|+++++|..-
T Consensus 253 -----a~~iLvT~s~~la~~V~~ev~~ql~~lpr-------~~i~~~al~~~g~ii~v--------~~~eeai~~~N~~A 312 (416)
T PRK13770 253 -----ARTYVISEDAQVLKDLESRIAKALPNVDR-------YDIVSKSIANQHYLIHA--------SNFDEACHVMNTIA 312 (416)
T ss_pred -----CcEEEEeCCHHHHHHHHHHHHHHHHhCCh-------HHHHHHHHHhCCEEEEE--------CCHHHHHHHHHhhC
Confidence 344556444 334444444444443311 1344555554 434443 27899999999742
Q ss_pred CCCeEEEEccchHHHHHHHHhcC-eeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 610 YGLASGIFTSDINKAMYFVDKID-SGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 610 yGLta~V~T~d~~~a~~va~~l~-aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
- -=.-|.++|.. .+..+++ +|.||+-.++. ++ ..+|-|| +.|..|+-....|++++
T Consensus 313 P-EHLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~ 378 (416)
T PRK13770 313 P-EHASIQTVNPQ---PYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTNR-----TARFTNGLSVNDFLTRN 378 (416)
T ss_pred h-HhheehhCCHH---HHHhhCCEeceeccCCCCchhhhccccCCCCcCCCCc-----ceeccCCCcHHHeecce
Confidence 1 12457888874 4445554 99999987653 22 2356555 44656666677788753
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.29 E-value=2.5 Score=46.96 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=143.2
Q ss_pred CCCceeeeecccCEEEEECCCC---chHHHHHHHHHHHHHcCCE--EEeeCCCC-chHHHHHHHHHHHHcCCCCCcEEEe
Q psy15158 381 NSNFTFTKREPIGVCGLITPWN---YPLMMLSWKMAPCLAAGNT--VVMKPSEV-SPLTALKLAELSVRAGFPKGVINIL 454 (709)
Q Consensus 381 ~~~~~~~~~~P~GVv~~I~PwN---fPl~~~~~~iapALaaGNt--VVlKPs~~-tplta~~l~ell~eAGlP~gvv~vv 454 (709)
++...-.++.|+--|++..|.- ||-.. +....||-.+|+. |+.-|... .......|+ ..+.+|+-+ +.
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStv-LM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy 151 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTV-LMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE----VY 151 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHH-HHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe----eh
Confidence 3445567888999999999973 44444 3456788889874 45566532 112222233 446676553 22
Q ss_pred cCCchhHHHHHH----hCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc--cEEEcCCCCHHHHHHHHHhhhh
Q psy15158 455 PGTGAVTGEAIS----QHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS--PLVIFDDYNLDKAVRMSMGGVF 528 (709)
Q Consensus 455 ~g~g~~~g~~L~----~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn--p~IV~~dADle~Aa~~iv~saf 528 (709)
.-.|...-.+|. .-|.||+|.=.|..-+.. .|.... ...-+=+ .-|-+ .+|-|++||++.++.+++.-+=
T Consensus 152 ~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~-~AGPSEvlViAD~~Anp~~iAaDLLaQAE 227 (393)
T TIGR00069 152 KVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTA--AKKLVF-GDVGIDM-PAGPSEVLVIADETANPEFVAADLLSQAE 227 (393)
T ss_pred hcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-CccCcCC-CCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 222333333442 367899999888765432 222110 1111111 12222 2444667999999999997764
Q ss_pred ccCCCcccCCcEEEEeCc--cHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhc-CCEEEECCccCCCCCCHHHHHHHH
Q psy15158 529 FNKGENCISAGRIFVDSN--IYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSE-GARLLIGGKRLDRPGDVDAVIKRA 605 (709)
Q Consensus 529 ~~~GQ~C~A~~rl~V~es--i~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~-Ga~vl~GG~~~~~~gdldeaI~~~ 605 (709)
+... .+.++|-.+ ++++..+.+.+.+..+.. .+.++.+++. |.-+++ .|++|+++++
T Consensus 228 Hd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~r-------~~i~~~al~~~g~ii~v--------~~l~ea~~~~ 287 (393)
T TIGR00069 228 HDPD-----AQAILVTTSEELAEAVQEEIERQLATLPR-------REIARKSLEDNGAIILV--------DDLEEAIEIS 287 (393)
T ss_pred cCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCCh-------HHHHHHHHHhCCEEEEE--------CCHHHHHHHH
Confidence 4432 344566444 334444444443333311 2345556654 433333 2789999999
Q ss_pred hcCCCCCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 606 NSTEYGLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 606 N~t~yGLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
|..-- --.-|+++|.. .+..++ ++|.|++-.++. ++ ..+|-|| +.|..++-....|++++
T Consensus 288 N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~G-----~Ar~~sgL~v~~F~K~~ 357 (393)
T TIGR00069 288 NDYAP-EHLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTGG-----TARFYSGLSVLDFLKRI 357 (393)
T ss_pred HhhCh-HhheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccCCCc-----ceeecCCccHHHhccce
Confidence 97421 12457788764 344444 599999987653 22 2355554 55666667777888853
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.16 E-value=1.9 Score=48.34 Aligned_cols=254 Identities=20% Similarity=0.207 Sum_probs=143.4
Q ss_pred CCCceeeeecccCEEEEECCCC---chHHHHHHHHHHHHHcCCE--EEeeCCCC-chHHHHHHHHHHHHcCCCCCcEEEe
Q psy15158 381 NSNFTFTKREPIGVCGLITPWN---YPLMMLSWKMAPCLAAGNT--VVMKPSEV-SPLTALKLAELSVRAGFPKGVINIL 454 (709)
Q Consensus 381 ~~~~~~~~~~P~GVv~~I~PwN---fPl~~~~~~iapALaaGNt--VVlKPs~~-tplta~~l~ell~eAGlP~gvv~vv 454 (709)
+|...-.++.|+.-|++..|.- ||-.. +...+||-.+|.. |+.-|... .......|+ ..+.+|+-. +.
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy 183 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTA-LMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH----IL 183 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHH-HHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe----ee
Confidence 3444567788999999999973 44444 4467788889874 55566632 112222233 456676543 22
Q ss_pred cCCchhHHHHHH----hCCCccEEEEcCChHHHHHHHHHHHhcCC---CcEEEcCCCccc--EEEcCCCCHHHHHHHHHh
Q psy15158 455 PGTGAVTGEAIS----QHLKIRKVGFTGSTVTGMKIMKSAAESNL---KKVSLELGGKSP--LVIFDDYNLDKAVRMSMG 525 (709)
Q Consensus 455 ~g~g~~~g~~L~----~~p~v~~V~FTGSt~~g~~I~~~aa~~~~---k~v~lElGGknp--~IV~~dADle~Aa~~iv~ 525 (709)
.-.|...-.+|. .-|.||+|.=.|..-+.. .|.... .. .-+=+ .-|-+= +|-|++||++.++.+++.
T Consensus 184 ~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-G~~~~VgID~-~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 184 KAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTA--AKMILQ-NSEAMVSIDM-PAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred ccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHH--HHHHhh-CCCCccccCC-CCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 222343333443 367899999888765432 122110 10 00001 122232 344567999999999997
Q ss_pred hhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHH--HHHHHHHHhcCCEEEECCccCCCCCCHHHHHH
Q psy15158 526 GVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKL--IDYCEKAKSEGARLLIGGKRLDRPGDVDAVIK 603 (709)
Q Consensus 526 saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i--~~~i~~a~~~Ga~vl~GG~~~~~~gdldeaI~ 603 (709)
-+=+... .+.++|..+ .++.+.+.+++.+. ++.+ .+.++.+...|.-+++ .|++|+++
T Consensus 260 QAEHdp~-----a~aiLvT~s--~~la~~V~~~v~~q-----l~~l~r~~i~~~sl~~g~iivv--------~~l~ea~~ 319 (431)
T PLN02926 260 QAEHGPD-----SQVVLVAVG--DVDLDAIEEEVEKQ-----CQSLPRGEIASKALGHSFIVVA--------RDMAEAIS 319 (431)
T ss_pred HhccCCC-----CcEEEEECC--HHHHHHHHHHHHHH-----HHhCChHHHHHHHHHCCEEEEE--------CCHHHHHH
Confidence 7654432 344666555 34455554444432 1111 2344555555544443 27899999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHH
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDK 673 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~ 673 (709)
++|..-- -=.-|.++|.. .+..++ ++|.|++..++. ++ ..+|-|| ++|..|+-....|+++
T Consensus 320 ~~N~~AP-EHLei~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~ 390 (431)
T PLN02926 320 FSNLYAP-EHLIVNVEDAE---SWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKY 390 (431)
T ss_pred HHHhhCh-HhheehhcCHH---HHHhhcCccceeccCCCCchhhhccccCcCcccCCCc-----ceeecCCCcHHHhcce
Confidence 9997321 12458888864 344444 599999976543 22 2356554 5566677777788884
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.12 E-value=2.9 Score=47.00 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=142.5
Q ss_pred CCceeeeecccCEEEEECCCC---chHHHHHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecC
Q psy15158 382 SNFTFTKREPIGVCGLITPWN---YPLMMLSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPG 456 (709)
Q Consensus 382 ~~~~~~~~~P~GVv~~I~PwN---fPl~~~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g 456 (709)
|...-.++.|+--|++..|.- ||-.. +...+||-.+|.. |+.-|..... ..-.+.-..+.+|+-. +..-
T Consensus 111 Gv~~g~~~~Pi~~vG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e----Iy~v 184 (425)
T PRK00877 111 GVRLGQRWRPIERVGLYVPGGKAAYPSSV-LMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE----VYKV 184 (425)
T ss_pred CeEEEEEEEehHHeEEEccCCCCCchHHH-HHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe----eecc
Confidence 344456788999999999973 55444 3456788889874 5556664212 2222233456676543 2222
Q ss_pred CchhHHHHHH----hCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCccc--EEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 457 TGAVTGEAIS----QHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP--LVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 457 ~g~~~g~~L~----~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp--~IV~~dADle~Aa~~iv~saf~~ 530 (709)
.|...-.+|. .-|.|++|+=.|..-+.. .|.... ...-+=+ .-|-+= +|-|++||++.++.+++.-+=+.
T Consensus 185 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~-~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 260 (425)
T PRK00877 185 GGAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVF-GVVGIDM-IAGPSEILVIADETADPDFVAADLLSQAEHD 260 (425)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHc-CCcCcCC-CCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 2443334443 367899999888765432 222111 1010101 122332 34456799999999999776544
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhc-CCEEEECCccCCCCCCHHHHHHHHhcCC
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSE-GARLLIGGKRLDRPGDVDAVIKRANSTE 609 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~-Ga~vl~GG~~~~~~gdldeaI~~~N~t~ 609 (709)
.. .+.++|..+ .++.+++.+++.+... .+.+ .+.++.+++. |.-+++ .|+||+++++|..-
T Consensus 261 ~~-----a~aiLvT~s--~~la~~V~~~v~~ql~--~l~r-~~ia~~sl~~~g~iivv--------~~leeai~~~N~~A 322 (425)
T PRK00877 261 PD-----AQSILVTTS--EELAEAVAAEVERQLA--TLPR-AEIARASLEGQGAIILV--------DDLEEAIELSNAYA 322 (425)
T ss_pred CC-----CcEEEEECC--HHHHHHHHHHHHHHHH--hCCh-HHHHHHHHHhCCEEEEE--------CCHHHHHHHHHhhC
Confidence 32 344666554 3444455444443200 0000 2344555555 544443 27899999999732
Q ss_pred CCCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHH
Q psy15158 610 YGLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDK 673 (709)
Q Consensus 610 yGLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~ 673 (709)
- -=.-|.++|... +..++ ++|.|++-.++. ++ ..+|-|| +.|..|+-+...|+++
T Consensus 323 P-EHLel~~~~p~~---~l~~I~nAGaiFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~F~K~ 387 (425)
T PRK00877 323 P-EHLEIQTEDPRA---LLDRIRNAGAIFLGPYTPESLGDYAAGPNHVLPTSG-----TARFSSGLSVYDFLKR 387 (425)
T ss_pred h-HheeehhCCHHH---HHhhcCccceeccCCCCchhhhhcccCCCcccCCCc-----ceeecCCccHHHhccc
Confidence 1 225688888743 34444 599999977643 22 2345544 5566677777788885
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.96 E-value=2.9 Score=46.62 Aligned_cols=258 Identities=20% Similarity=0.251 Sum_probs=144.8
Q ss_pred CCCceeeeecccCEEEEECC---CCchHHHHHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEec
Q psy15158 381 NSNFTFTKREPIGVCGLITP---WNYPLMMLSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILP 455 (709)
Q Consensus 381 ~~~~~~~~~~P~GVv~~I~P---wNfPl~~~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~ 455 (709)
+|.....++.|+--|++..| --||-..++ ...||-.+|+. |+.-|....- .+..+.-..+.+|+.. +..
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e----Iy~ 179 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE----VYK 179 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH----HHH
Confidence 34455677889999999999 556665544 56788889984 4556665422 1222223334455432 111
Q ss_pred CCchhHHHHHHhC----CCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE-EEcCCCCHHHHHHHHHhhhhcc
Q psy15158 456 GTGAVTGEAISQH----LKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL-VIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 456 g~g~~~g~~L~~~----p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~-IV~~dADle~Aa~~iv~saf~~ 530 (709)
-.|...-.+|.-. |.|++|.=.|..-+.- .|.... ...-+=+..|-..-+ |-|++||++.++.+++.-+=+.
T Consensus 180 vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVta--AKr~v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 180 VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTA--AKRLVS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHH--HHHHhh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 1244444566655 8899999888765432 122111 111121222333333 3456699999999999776554
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCHHHHHHHHhcCC
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAK-SEGARLLIGGKRLDRPGDVDAVIKRANSTE 609 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~-~~Ga~vl~GG~~~~~~gdldeaI~~~N~t~ 609 (709)
.. .+.++|..| ++|.+.+.+++.+.... +.+ .+.+..+. ..|+-+++ .|++|+++++|..-
T Consensus 257 ~~-----a~aiLvT~s--~~la~~v~~~v~~~l~~--l~~-~ei~~~~l~~~g~iilv--------~~l~ea~~~~N~~A 318 (425)
T COG0141 257 PD-----AQAILVTDS--EELAEAVEAAVERQLET--LPR-AEIARKALENYGAIILV--------DDLDEAVEISNEYA 318 (425)
T ss_pred CC-----ceEEEEeCc--HHHHHHHHHHHHHHHHh--ccH-HHHHHHHHHhCCeEEEE--------CCHHHHHHHHHhhC
Confidence 32 455666665 45666666555533100 001 22333344 34544443 27999999999632
Q ss_pred CCCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---CC------CCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 610 YGLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---TD------VAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 610 yGLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
.--.-|.++|.... ..++ ++|.|++..++. ++ ..+|-+|+ -|..++-+...|+++.
T Consensus 319 -PEHLei~~~~p~~~---l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT~g~-----AR~~s~L~v~dF~K~~ 384 (425)
T COG0141 319 -PEHLELQTENPREL---LGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPTSGT-----ARFSSGLSVYDFLKRS 384 (425)
T ss_pred -hHhhhhhhcCHHHH---HHHhcccceeeecCCCCccccccccCCCccCCCCcc-----chhcCCccHHHhhhHH
Confidence 12356788886543 4444 499999998753 22 23565554 3444555555666653
|
|
| >KOG2449|consensus | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.026 Score=52.93 Aligned_cols=46 Identities=30% Similarity=0.346 Sum_probs=44.1
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCC
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~ 642 (709)
+++|+|..+|+++||-...|||.+.+.++.+++..++|.+-+|.+.
T Consensus 97 tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~i 142 (157)
T KOG2449|consen 97 TLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPI 142 (157)
T ss_pred CCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccc
Confidence 8999999999999999999999999999999999999999999753
|
|
| >TIGR00517 acyl_carrier acyl carrier protein | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.073 Score=45.12 Aligned_cols=64 Identities=27% Similarity=0.391 Sum_probs=48.9
Q ss_pred HHHHHHHhhhccc---CcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 157 PVLKTIWAGILNS---EVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 157 ~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
++++.+=+..+.. +|..+|.|+. -|..|+|.+.|+-++.+.+++++..+++.--.+++++..-+
T Consensus 6 ~~l~~il~~~~~~~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i 73 (77)
T TIGR00517 6 EKVKAIIKEQLNVDEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYI 73 (77)
T ss_pred HHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHH
Confidence 3455555544433 7899999985 89999999999999999999999888876556666655444
|
S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site. |
| >PRK05828 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.092 Score=45.69 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=55.2
Q ss_pred hhhHHHHHHHhh-hcc---cCcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 154 AIIPVLKTIWAG-ILN---SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 154 ~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
.+.++++.|=+. -+. .++..+|.|..-|+.|+|++.||-++.+.+++++.-+++.--.+.+|++..++.
T Consensus 5 eI~~~i~~ii~e~~~~~~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~ 77 (84)
T PRK05828 5 EILLKIKEIAKKKNFAVTLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKE 77 (84)
T ss_pred HHHHHHHHHHHHhccCCCcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHH
Confidence 456667777764 222 267788999999999999999999999999999988888777778887766654
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.063 Score=60.43 Aligned_cols=90 Identities=31% Similarity=0.523 Sum_probs=58.6
Q ss_pred EEEEccchHHHHHHHHhcCeeeEEEcCCC-CC------CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccCC
Q psy15158 614 SGIFTSDINKAMYFVDKIDSGTVFINTYN-KT------DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNK 686 (709)
Q Consensus 614 a~V~T~d~~~a~~va~~l~aG~V~VN~~~-~~------~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~~ 686 (709)
-.||+ |...-++++.+--.|.|..=-.. +- +-..+||=.. |+ -..-.+.+.++.+.+..++||+|++..
T Consensus 384 Ptv~~-~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa--~V-~t~dl~~a~~va~~l~aGtVwiN~y~~ 459 (501)
T KOG2450|consen 384 PTVFT-NVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAA--GV-FTKDLDKAHRVANALQAGTVWINCYNV 459 (501)
T ss_pred Ceecc-CCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCccccee--eE-eccChHHHHHHHHHhcCceEEEecccc
Confidence 34666 44455666666666666543211 10 1122343211 10 112456778888888999999999988
Q ss_pred CCCCCCCCCCccCCCCCCCCC
Q psy15158 687 TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 687 ~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
.....||+|.|+||+||+.+.
T Consensus 460 ~~~~~PfgG~K~SG~GRE~g~ 480 (501)
T KOG2450|consen 460 FDAQVPFGGFKMSGIGRELGE 480 (501)
T ss_pred ccccCCccccccccCCccccH
Confidence 889999999999999998764
|
|
| >CHL00124 acpP acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.097 Score=44.91 Aligned_cols=67 Identities=31% Similarity=0.421 Sum_probs=52.4
Q ss_pred hHHHHHHHhhhcc---cCcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 156 IPVLKTIWAGILN---SEVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 156 ~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
.++++.+=+.++. .+|..+++|.. -|..|+|.+.|+-++.+.+++++.-+++.--++++++..-+..
T Consensus 7 ~~~l~~ii~~~~~~~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~ 77 (82)
T CHL00124 7 FEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQ 77 (82)
T ss_pred HHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHH
Confidence 3444444444443 38999999998 9999999999999999999999988888767778877666543
|
|
| >PRK07081 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.11 Score=45.13 Aligned_cols=39 Identities=23% Similarity=0.554 Sum_probs=37.2
Q ss_pred CcCCCccccccCCCcchhHHHHHHHHhhcCceecccccc
Q psy15158 170 EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVL 208 (709)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~ 208 (709)
+|.++++||.-|..|+|++.||-++.+.+++++..+.+.
T Consensus 21 ~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~ 59 (83)
T PRK07081 21 SIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLN 59 (83)
T ss_pred hcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcC
Confidence 789999999999999999999999999999999998886
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.28 E-value=16 Score=40.45 Aligned_cols=245 Identities=16% Similarity=0.142 Sum_probs=136.6
Q ss_pred CCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCc
Q psy15158 381 NSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTG 458 (709)
Q Consensus 381 ~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g 458 (709)
+|...-.++.|+--+++..|.-||-. ++....||-.+|.. |+.-|... .....|+ ..+.+|+-. +..-.|
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pSt-vLM~~iPAkvAGV~~Iv~~TPp~~--i~p~vL~-aa~~~Gv~e----Iy~vGG 154 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVST-LVMLAVPARAAGVEEIYVVTPPRG--VTGELLA-VAKELGVKG----VLAIGG 154 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHH-HHHhhccHhhcCCCeEEEeCCCCC--CCHHHHH-HHHHcCCCe----eecccC
Confidence 34445667889999999999545533 44567889999975 44455532 2222233 456676543 322223
Q ss_pred hhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCC
Q psy15158 459 AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISA 538 (709)
Q Consensus 459 ~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~ 538 (709)
...-.++...-.|++|.=.|..-+.. .|.... ...-+=+--|-..-+|+-++||++.++.+++.-+=+.. ..
T Consensus 155 AQAIAa~a~gt~VDkIvGPGN~yV~~--AK~~v~-g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~-----~a 226 (368)
T PRK13769 155 PHGLAYAVFHMGVDMVAGPGGLYVQA--AKYVLS-QYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP-----TS 226 (368)
T ss_pred HHHHHHHhcCCCcCEEECCCcHHHHH--HHHHHh-CCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC-----CC
Confidence 33334666555899999888765532 222110 11111122344445666667999999999997664432 24
Q ss_pred cEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCHHHHHHHHhcCCCCCeEEEEc
Q psy15158 539 GRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFT 618 (709)
Q Consensus 539 ~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~gdldeaI~~~N~t~yGLta~V~T 618 (709)
+.++|..+ .++.+++.+++.+. +......|.-+++ .|++|+++++|..-- -=..|++
T Consensus 227 ~~iLvT~s--~~la~~V~~~v~~~------------~~~~~~~~~iivv--------~~leeai~~~N~~AP-EHLel~~ 283 (368)
T PRK13769 227 FAYLLSTD--AELLKAAEEIYRRE------------RTSSMGPLEVRKV--------AGVEEAVRFIDEIAP-EHLEVWG 283 (368)
T ss_pred cEEEEECC--HHHHHHHHHHHHHH------------HHhcCCCCeEEEE--------CCHHHHHHHHHhhCh-HheEeeC
Confidence 45666665 46666666555531 1111111112222 289999999997321 1133444
Q ss_pred cchHHHHHHHHhc-CeeeEEEcCCCC-CC------CCCCCCCCCCCCCCCccChHHHHHHHHHh
Q psy15158 619 SDINKAMYFVDKI-DSGTVFINTYNK-TD------VAAPFGGFKQSGFGKDLDINKAMYFVDKI 674 (709)
Q Consensus 619 ~d~~~a~~va~~l-~aG~V~VN~~~~-~~------~~~PFGG~k~SG~G~~~G~~~~~~ftr~~ 674 (709)
.+ .+..++ ++|.||++.+.. ++ ..+|-|| ..|..|+-....|+++.
T Consensus 284 ~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~ 337 (368)
T PRK13769 284 RR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPTGG-----TARWRGIITPLTFMKPI 337 (368)
T ss_pred cH-----HHHhhCCccCChhcCCchhhhccccCCCCcCCCCc-----ceeccCCCcHHHcccce
Confidence 22 244455 499999965321 12 2345544 45666667777888853
|
|
| >PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.14 Score=44.00 Aligned_cols=54 Identities=20% Similarity=0.331 Sum_probs=43.7
Q ss_pred hhHHHHHHHhhhccc---CcCCCccccccC-CCcchhHHHHHHHHhhcCceecccccc
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFFQSG-AGSMDVVRLIEEIKENLQITLQNEDVL 208 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ne~v~ 208 (709)
+.++++.+=+.+... ++.+++++|..| ..|||+|.||-++.+.+++++..++.-
T Consensus 3 i~~~I~~iL~~~~~~~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~ 60 (78)
T PRK05087 3 FKEQVLDILEELTGEDIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFD 60 (78)
T ss_pred HHHHHHHHHHHHhCCChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcC
Confidence 445566666666433 566899999999 599999999999999999999887765
|
|
| >TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2 | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.098 Score=44.25 Aligned_cols=52 Identities=21% Similarity=0.351 Sum_probs=42.9
Q ss_pred HHHHHHHhhh--ccc-CcCCCccccccCC-CcchhHHHHHHHHhhcCceecccccc
Q psy15158 157 PVLKTIWAGI--LNS-EVSEDTDFFQSGA-GSMDVVRLIEEIKENLQITLQNEDVL 208 (709)
Q Consensus 157 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ne~v~ 208 (709)
++++.|-+.| +.. ..++++|+|.+|- .||++|.||-++.+.+++++..+.+-
T Consensus 2 e~i~eIL~~i~~~~~~~~~~d~~L~~~GllDS~~~v~Li~~lE~ef~I~i~~~el~ 57 (73)
T TIGR01688 2 NGVLDILAEVTGSDDVKENPDLELFEEGLLDSFGTVQLLLEIQNQFDIDVPISEFD 57 (73)
T ss_pred hHHHHHHHHHhcCcccccCccHHHHHccchhHHHHHHHHHHHHHHhCCccCHHHcC
Confidence 3466677776 443 4588999999998 99999999999999999998887765
|
This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein. |
| >PRK07639 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.2 Score=43.76 Aligned_cols=55 Identities=18% Similarity=0.238 Sum_probs=46.5
Q ss_pred hhhhHHHHHHHhhhccc----CcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccc
Q psy15158 153 EAIIPVLKTIWAGILNS----EVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDV 207 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v 207 (709)
..+.++|+.|=..+|.. +|.++++|+. -|..|||++.||-++.+.+++++..+++
T Consensus 4 ~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~ 63 (86)
T PRK07639 4 EALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEV 63 (86)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHc
Confidence 34566788888888654 5789999988 6999999999999999999999987765
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.16 Score=65.16 Aligned_cols=65 Identities=17% Similarity=0.351 Sum_probs=57.5
Q ss_pred HHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 157 PVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..+..+|+.+|.. +|+.++|||..|..|+..+||+..+++.+++++.-.++|-+++..++...+.
T Consensus 981 ~~l~~~~~~~l~~~~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~ 1046 (1296)
T PRK10252 981 TIIAAAFSSLLGCDVVDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLD 1046 (1296)
T ss_pred HHHHHHHHHHhCCCCCCCCcCHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHh
Confidence 4479999999986 7899999999999999999999999999998888888998888888766664
|
|
| >PRK07117 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.23 Score=42.65 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=52.3
Q ss_pred hhhhHHHHHHHhhhcc----cCcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhh
Q psy15158 153 EAIIPVLKTIWAGILN----SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRD 215 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~ 215 (709)
..+.++++.|=+.+++ .+|..++.|..-|+.|+|.+.||-++.+.+++++..++.---.+.+|
T Consensus 4 ~ei~~~v~~ii~e~~p~i~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d 70 (79)
T PRK07117 4 QRIFDILVRHIREVLPDLDQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGE 70 (79)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHH
Confidence 3467778888888886 28999999999999999999999999999999998887764444444
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.17 Score=58.08 Aligned_cols=45 Identities=40% Similarity=0.833 Sum_probs=38.1
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++++.+++++|.+.......||||.|.||+|+.++.
T Consensus 420 d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 464 (480)
T cd07559 420 DINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHK 464 (480)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChH
Confidence 346788999999999999997655566799999999999988765
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >KOG2451|consensus | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.45 Score=51.86 Aligned_cols=44 Identities=32% Similarity=0.586 Sum_probs=36.8
Q ss_pred HHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 665 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 665 ~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
..+.+..+.+..++|-+|....-....||||.|+||+||+.+++
T Consensus 441 s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgsky 484 (503)
T KOG2451|consen 441 SRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKY 484 (503)
T ss_pred HHHHHHHHHHhcceeecccceecccccCcCCccccccCcccccc
Confidence 44556677777899999998777788999999999999998764
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.17 Score=58.16 Aligned_cols=46 Identities=30% Similarity=0.599 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.+..+++++|.+....+..||||.|.||+|++++.+
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~ 466 (481)
T TIGR03216 421 DLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVH 466 (481)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHH
Confidence 3567889999999999999976655677999999999999987653
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.66 Score=53.33 Aligned_cols=46 Identities=35% Similarity=0.608 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
....+.++.+.+..+.+++|.........||||.|.||+|++++.+
T Consensus 422 d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~ 467 (480)
T cd07111 422 NLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKE 467 (480)
T ss_pred CHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHH
Confidence 4566788889899999999987666667899999999999987753
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.17 Score=58.05 Aligned_cols=44 Identities=41% Similarity=0.832 Sum_probs=37.6
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.+..+++++|.+....+..||||.|.||+|+.++.
T Consensus 418 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 461 (477)
T cd07113 418 LSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGS 461 (477)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchH
Confidence 46678899999999999997655567799999999999988764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.19 Score=64.90 Aligned_cols=72 Identities=22% Similarity=0.420 Sum_probs=61.6
Q ss_pred hhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhhccCC
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIEVSRQ 226 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~~s~G 226 (709)
+...++.+|..+|.. +|+.++|||..|..|+..++|+.++++..++++.=..+|-+++..++.+.+.....+
T Consensus 849 ~~~~l~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~~~ 923 (1389)
T TIGR03443 849 TEREIRDLWLELLPNRPATISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLKKG 923 (1389)
T ss_pred HHHHHHHHHHHHhCCCccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhhcc
Confidence 444579999999974 699999999999999999999999999998888888999999999988876554333
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.22 Score=57.23 Aligned_cols=45 Identities=38% Similarity=0.601 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.+|.++++.+++++|.+.......||||.|.||+|++++.
T Consensus 419 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 463 (479)
T cd07116 419 DGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHK 463 (479)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChH
Confidence 356788999999999999997655566789999999999998765
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.22 Score=56.88 Aligned_cols=45 Identities=33% Similarity=0.718 Sum_probs=38.1
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...+.+|.+.++.+++++|.+.......||||.|.||+|+..+.+
T Consensus 414 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~ 458 (467)
T TIGR01804 414 LGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKA 458 (467)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHH
Confidence 566889999999999999986655667899999999999987653
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.22 Score=56.52 Aligned_cols=45 Identities=40% Similarity=0.661 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...+.++.+.+..+.+++|.+....+..||||.|.||+|++++.+
T Consensus 389 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~ 433 (446)
T cd07106 389 LERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIE 433 (446)
T ss_pred HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHH
Confidence 567889999999999999987766778999999999999987653
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.26 Score=56.15 Aligned_cols=45 Identities=29% Similarity=0.553 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+++|.+.+..+.+++|.+.......||||.|.||+|+..+.
T Consensus 398 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~ 442 (457)
T cd07108 398 DLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASL 442 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccc
Confidence 456688999999999999998766667799999999999987664
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.57 E-value=0.24 Score=57.03 Aligned_cols=45 Identities=31% Similarity=0.710 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+....+..||||.|.||+|+.++.
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 465 (488)
T PRK13252 421 DLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGI 465 (488)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChH
Confidence 356788899999999999997655566789999999999988765
|
|
| >PRK05350 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=90.49 E-value=0.38 Score=41.37 Aligned_cols=67 Identities=15% Similarity=0.258 Sum_probs=51.9
Q ss_pred hhHHHHHHHhhhcc---cCcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 155 IIPVLKTIWAGILN---SEVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 155 ~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+.++.+=+.++. .+|..++.| -.-|+.|+|++.|+-++.+.+++++..+++.--++.+|+..-+.
T Consensus 7 i~~~v~~ii~~~~~~~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~ 77 (82)
T PRK05350 7 ILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVE 77 (82)
T ss_pred HHHHHHHHHHHHhCCCHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHH
Confidence 33445555555554 389999996 67899999999999999999999999988876777777665554
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.21 Score=58.13 Aligned_cols=46 Identities=33% Similarity=0.666 Sum_probs=38.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.++.+++++|.....++..||||.|.||+|+.++.+
T Consensus 472 d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~ 517 (538)
T PLN02466 472 NLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIY 517 (538)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHH
Confidence 3567889999999999999976666677899999999999987653
|
|
| >PRK00982 acpP acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=90.37 E-value=0.41 Score=40.47 Aligned_cols=61 Identities=28% Similarity=0.354 Sum_probs=46.0
Q ss_pred HHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHH
Q psy15158 158 VLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYI 218 (709)
Q Consensus 158 ~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~ 218 (709)
.++.+=+..+.. +|+++++| -.-|..|++++.|+-++++.+++++..+.+.--++..++..
T Consensus 7 ~l~~~l~~~l~~~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~ 71 (78)
T PRK00982 7 KVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVD 71 (78)
T ss_pred HHHHHHHHHHCCCHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHH
Confidence 344444444433 78999999 69999999999999999999999988887764555555443
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.25 Score=56.65 Aligned_cols=45 Identities=31% Similarity=0.521 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+....+..||||.|.||+|+.+++
T Consensus 413 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 457 (472)
T TIGR03374 413 DVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 457 (472)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchH
Confidence 456688899999999999998766667799999999999987664
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=90.27 E-value=0.26 Score=56.51 Aligned_cols=45 Identities=40% Similarity=0.855 Sum_probs=38.0
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...+.++.+.++.++|++|.+.......||||.|.||+|+.++++
T Consensus 416 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~ 460 (475)
T cd07117 416 INRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKS 460 (475)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHH
Confidence 467888999999999999986555677899999999999887653
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PTZ00171 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=90.21 E-value=0.36 Score=46.52 Aligned_cols=69 Identities=20% Similarity=0.370 Sum_probs=53.7
Q ss_pred hhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 153 EAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.++.+.++.|=+.++.. +|.++++|. .-|++|||++.||-++.+.+++++.-|++---.++.|++.-+.
T Consensus 69 ~~v~~~l~eiiae~l~vd~~~I~~ds~~~~dLg~DSLd~veLv~~LEdeFgI~Ipded~~~i~TV~dlvd~V~ 141 (148)
T PTZ00171 69 EDVLTRVKKVVKNFEKVDASKITPESNFVKDLGADSLDVVELLIAIEQEFNLTIPDHDAEKIKTVQDAIDYIE 141 (148)
T ss_pred HHHHHHHHHHHHHHhCCCHhhCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHHCCCHHHHHHHHH
Confidence 34566677777766643 788999997 8999999999999999999999999888765566666555443
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=90.19 E-value=0.25 Score=56.84 Aligned_cols=45 Identities=33% Similarity=0.557 Sum_probs=37.1
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+.......||||.|.||+|++.+.
T Consensus 422 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 466 (482)
T PRK11241 422 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSK 466 (482)
T ss_pred CHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHH
Confidence 356678899999999999997655555689999999999987664
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=90.13 E-value=0.24 Score=57.03 Aligned_cols=46 Identities=78% Similarity=1.263 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.++.+++++|.+....+..||||.|.||+|+.++.+
T Consensus 426 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~ 471 (486)
T cd07140 426 DINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEE 471 (486)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHH
Confidence 4566788999999999999986655667899999999999887653
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=90.12 E-value=0.27 Score=56.42 Aligned_cols=45 Identities=36% Similarity=0.721 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+.......||||.|.||+|+.++.
T Consensus 418 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 462 (476)
T cd07142 418 NIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGI 462 (476)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchH
Confidence 346678899999999999997666667799999999999987764
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.88 Score=51.92 Aligned_cols=45 Identities=40% Similarity=0.609 Sum_probs=38.1
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....++++.+++..+.+++|.+.......||||.|.||+|+.++.
T Consensus 397 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~ 441 (455)
T cd07120 397 DLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGV 441 (455)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchH
Confidence 356788999999999999998765566789999999999987764
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.05 E-value=0.26 Score=56.45 Aligned_cols=45 Identities=33% Similarity=0.539 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.++.+++++|.+....+..||||.|.||+|++++.
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 458 (475)
T PRK13473 414 DVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSL 458 (475)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchH
Confidence 346688899999999999998765566789999999999988764
|
|
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.25 Score=56.34 Aligned_cols=46 Identities=43% Similarity=0.863 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.++++.+.+++|.+....+..||||.|.||+|+..+.+
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~ 441 (457)
T cd07090 396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTA 441 (457)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHH
Confidence 3566889999999999999986656677999999999999887653
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=89.98 E-value=0.27 Score=55.85 Aligned_cols=44 Identities=34% Similarity=0.542 Sum_probs=37.8
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.++.+.+++|.+....+..||||.|.||+|+.++.
T Consensus 395 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~ 438 (452)
T cd07102 395 IARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSR 438 (452)
T ss_pred HHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchH
Confidence 56788899999999999998766667789999999999988764
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=89.91 E-value=0.28 Score=55.77 Aligned_cols=45 Identities=38% Similarity=0.581 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..+.+++|.+...++..||||.|+||+|+.++.
T Consensus 394 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~ 438 (448)
T TIGR01780 394 DLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSK 438 (448)
T ss_pred CHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchH
Confidence 356678889999999999998765666789999999999988764
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=89.88 E-value=0.25 Score=56.41 Aligned_cols=46 Identities=39% Similarity=0.793 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
....+.++.+.+..+++++|......+..||||.|.||+|+.++.+
T Consensus 404 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~ 449 (462)
T cd07112 404 DLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLH 449 (462)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHH
Confidence 4567888999999999999986555677999999999999887653
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=89.88 E-value=0.28 Score=56.33 Aligned_cols=45 Identities=44% Similarity=0.869 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.+|.+.++.+.+++|......+..||||.|.||+|+..+.
T Consensus 424 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 468 (484)
T cd07144 424 DIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGE 468 (484)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchH
Confidence 456788999999999999998766667799999999999987664
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=89.79 E-value=0.26 Score=56.10 Aligned_cols=46 Identities=33% Similarity=0.671 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.++.+++++|... ......||||.|.||+|+.++.+
T Consensus 395 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~ 441 (454)
T cd07109 395 DGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLE 441 (454)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHH
Confidence 35678899999999999999765 55667899999999999987754
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >PRK07579 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.25 Score=51.56 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=21.4
Q ss_pred cceeeeeCcc--cHHHHHHHhccCCC
Q psy15158 8 ISITVIKFNL--KGEEIHNFIRGLDS 31 (709)
Q Consensus 8 ~~~~~~~~~~--~~~~~~~~ir~~~~ 31 (709)
.+++.|||++ ++++|||+|||+.+
T Consensus 190 ked~~Idw~~~~~a~~I~n~IRAl~~ 215 (245)
T PRK07579 190 KQLREIDLDERGTFRHFINRLRALTH 215 (245)
T ss_pred hhheEECCCCCCCHHHHHHHHhCCCC
Confidence 4889999997 59999999999983
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=89.62 E-value=0.29 Score=56.25 Aligned_cols=45 Identities=29% Similarity=0.637 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.++|++|.+....+..||||.|.||+|+.++.
T Consensus 418 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 462 (488)
T TIGR02299 418 DVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGT 462 (488)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchH
Confidence 356788999999999999997665566789999999999988764
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.28 Score=55.82 Aligned_cols=46 Identities=33% Similarity=0.536 Sum_probs=37.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.+..+++++|.+.. ..+..||||.|.||+|++++.+
T Consensus 394 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~ 440 (453)
T cd07094 394 DLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPY 440 (453)
T ss_pred CHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHH
Confidence 356778999999999999997643 3467999999999999987753
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.31 Score=55.76 Aligned_cols=46 Identities=39% Similarity=0.779 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.+..+.+++|......+..||||.|.||+|++.+.+
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~ 446 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHF 446 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHH
Confidence 3467889999999999999976555677899999999999887653
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.55 E-value=0.32 Score=55.57 Aligned_cols=45 Identities=38% Similarity=0.752 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+....+..||||.|+||+|+.++.
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 442 (457)
T PRK09406 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSA 442 (457)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchH
Confidence 345678899999999999998665666799999999999988764
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.51 E-value=0.31 Score=56.15 Aligned_cols=45 Identities=42% Similarity=0.856 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+.+++|.+....+..||||.|.||+|++++.
T Consensus 433 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 477 (494)
T PRK09847 433 DLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSL 477 (494)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchH
Confidence 356788899999999999998765667789999999999998764
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=89.50 E-value=0.32 Score=55.90 Aligned_cols=45 Identities=47% Similarity=0.885 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..+.+++|.+....+..||||.|.||+|+..+.
T Consensus 422 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 466 (481)
T cd07141 422 DIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGE 466 (481)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchH
Confidence 357788999999999999997665667789999999999987664
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.30 E-value=0.28 Score=71.33 Aligned_cols=69 Identities=20% Similarity=0.390 Sum_probs=61.5
Q ss_pred hhhHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 154 AIIPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
.+...++.||+.+|.. .|..+.|||..|..|+..+||+.++....++++.-.++|.+++..++...+..
T Consensus 5072 ~~e~~l~~i~~~vL~~~~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 5141 (5163)
T PRK12316 5072 ELEQQVAAIWAEVLQLERVGLDDNFFELGGHSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELAAA 5141 (5163)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCChhhccchHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHHHh
Confidence 3445689999999987 89999999999999999999999999998999999999999999998877643
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=89.20 E-value=0.3 Score=55.98 Aligned_cols=45 Identities=58% Similarity=1.006 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.++.+++++|.+....+..||||.|+||+|+.++.
T Consensus 418 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~ 462 (476)
T cd07091 418 DINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGE 462 (476)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchH
Confidence 356788999999999999998665667799999999999987764
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=89.03 E-value=0.35 Score=55.13 Aligned_cols=45 Identities=36% Similarity=0.609 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..+.+++|.+....+..||||.|.||+|+.+++
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~ 440 (456)
T cd07107 396 DISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECL 440 (456)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchH
Confidence 356788899999999999998765566799999999999988764
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=88.98 E-value=0.31 Score=56.32 Aligned_cols=45 Identities=40% Similarity=0.730 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+....+..||||.|.||+|+..+.
T Consensus 435 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~ 479 (501)
T PLN02766 435 DLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGM 479 (501)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchH
Confidence 356688899999999999997665667789999999999987764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=88.93 E-value=0.32 Score=56.13 Aligned_cols=45 Identities=33% Similarity=0.541 Sum_probs=37.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...++++.+.++.++|++|.........||||.|.||+|++.+.
T Consensus 436 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~ 480 (498)
T PLN02278 436 DLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSK 480 (498)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchH
Confidence 456788999999999999997654445689999999999988764
|
|
| >KOG2452|consensus | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.28 Score=54.26 Aligned_cols=43 Identities=79% Similarity=1.292 Sum_probs=36.8
Q ss_pred HHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 665 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 665 ~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+....+..++|.+|++..++...||||+|+||+|+++++
T Consensus 823 ~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge 865 (881)
T KOG2452|consen 823 NKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGE 865 (881)
T ss_pred chhhhhhhhhccceEEEeeccccccccCCCCccccccccchhH
Confidence 3456677777899999999999999999999999999987653
|
|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.34 Score=55.24 Aligned_cols=45 Identities=31% Similarity=0.646 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+.+++|.+....+..||||.|.||+|++.+.
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 442 (456)
T cd07110 398 DAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGE 442 (456)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchH
Confidence 356788899999999999997655566799999999999987764
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=88.72 E-value=1.3 Score=50.78 Aligned_cols=45 Identities=42% Similarity=0.774 Sum_probs=37.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.+|.+.+..+.+++|......+..||||.|.||+|+..+.
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~ 458 (482)
T cd07119 414 DIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGP 458 (482)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchH
Confidence 356788899999999999997655567789999999999987664
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PRK08172 putative acyl carrier protein IacP; Validated | Back alignment and domain information |
|---|
Probab=88.68 E-value=0.6 Score=40.40 Aligned_cols=68 Identities=18% Similarity=0.288 Sum_probs=53.4
Q ss_pred hhHHHHHHHhhhccc---CcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
+.++++.|-+..|.. +|.++|.|.. -|+.|+|++.||-++.+.+++++..+++.--.++.|.+.-+.+
T Consensus 5 i~~~v~~iiae~l~v~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~ 76 (82)
T PRK08172 5 IEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKK 76 (82)
T ss_pred HHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHH
Confidence 344556666655544 8999999954 8999999999999999999999999988766777776665543
|
|
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=88.47 E-value=0.36 Score=55.00 Aligned_cols=46 Identities=43% Similarity=0.819 Sum_probs=39.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
....+.++.+.+..+.+++|.+....+..||||.|.||+|+.++.+
T Consensus 396 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~ 441 (454)
T cd07118 396 DIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRY 441 (454)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHH
Confidence 3567888999999999999987766678999999999999887653
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PRK05883 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=88.47 E-value=0.75 Score=40.59 Aligned_cols=71 Identities=23% Similarity=0.305 Sum_probs=58.0
Q ss_pred HhhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 152 EEAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
...+.+.|+.|=+..|.. +|.+++.|+ --|..|+|.+.||-++.+.+++++..+++.-.++.+|+..-+..
T Consensus 12 ~~~I~~~l~~iia~~l~v~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~ 86 (91)
T PRK05883 12 PSTVSATLLSILRDDLNVDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAA 86 (91)
T ss_pred HHHHHHHHHHHHHHHhCCChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHH
Confidence 344666667776666654 889999996 58999999999999999999999999999888888887776654
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.41 Score=53.90 Aligned_cols=45 Identities=24% Similarity=0.400 Sum_probs=37.7
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+.......||+|.|.||+|+..+.
T Consensus 348 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~ 392 (409)
T PRK10090 348 NLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 392 (409)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchH
Confidence 456788899999999999998765555679999999999987664
|
|
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=88.32 E-value=0.44 Score=54.17 Aligned_cols=45 Identities=47% Similarity=0.780 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+.+++|.+....+..||||.|.||+|+..+.
T Consensus 392 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~ 436 (450)
T cd07092 392 DVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSI 436 (450)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChH
Confidence 356688899999999999998765667799999999999987764
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=88.13 E-value=0.47 Score=68.24 Aligned_cols=68 Identities=19% Similarity=0.364 Sum_probs=60.8
Q ss_pred hhHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 155 IIPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
+...|..||+.+|.. +|.-++|||..|..|+-.+||+.++++.+++.+.=.++|.+++..++.+....
T Consensus 1639 ~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~~la~~i~~ 1707 (4334)
T PRK05691 1639 LQQQIAAIWREVLGLPRVGLRDDFFALGGHSLLATQIVSRTRQACDVELPLRALFEASELGAFAEQVAR 1707 (4334)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCchHHhcccHHHHHHHHHHHHHHhCCCcchhhhhcCCcHHHHHHHhhh
Confidence 334579999999987 78999999999999999999999999999999999999999999999876643
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=88.09 E-value=0.54 Score=53.18 Aligned_cols=45 Identities=40% Similarity=0.802 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..+.+++|.+....+..||||.|.||+|+.++.
T Consensus 371 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~ 415 (429)
T cd07100 371 DLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGR 415 (429)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCcchH
Confidence 346778899999999999998765667799999999999987664
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=88.03 E-value=0.42 Score=54.96 Aligned_cols=45 Identities=22% Similarity=0.398 Sum_probs=36.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCC--CCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKT--DVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~--~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+... .+..||||.|.||+|++++.
T Consensus 383 d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~ 429 (484)
T PLN02174 383 NKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGK 429 (484)
T ss_pred CHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchH
Confidence 4566788999999999999976533 35689999999999988764
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=88.02 E-value=0.46 Score=54.94 Aligned_cols=45 Identities=33% Similarity=0.673 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+++++|.........||||.|.||+|++.+.
T Consensus 429 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~ 473 (503)
T PLN02467 429 DLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGE 473 (503)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchH
Confidence 456788999999999999997655566799999999999988764
|
|
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=87.97 E-value=0.48 Score=53.93 Aligned_cols=46 Identities=33% Similarity=0.710 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
....+.++.+.++.+.+++|......+..||||.|.||+|+.++.+
T Consensus 397 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~ 442 (455)
T cd07093 397 DLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDY 442 (455)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHH
Confidence 3566888999999999999987665677899999999999877653
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK12449 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=87.92 E-value=0.8 Score=38.97 Aligned_cols=66 Identities=18% Similarity=0.270 Sum_probs=49.5
Q ss_pred hhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
+.+.++.+=..++.. +|.++|.|+ --|..|+|.+.|+-++.+.+++++.-+++.--.+.+|+..-+
T Consensus 6 i~~~l~~il~~~~~~~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l 75 (80)
T PRK12449 6 IFERLINLIQKQRSYLSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYL 75 (80)
T ss_pred HHHHHHHHHHHHhCCCccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHH
Confidence 334455555554433 899999997 899999999999999999999998877777555555554443
|
|
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=87.80 E-value=1.8 Score=49.19 Aligned_cols=45 Identities=36% Similarity=0.725 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...++++.+.++.+.+++|.... ..+..||||.|.||+|+.++.
T Consensus 392 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~ 437 (451)
T cd07150 392 DLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGE 437 (451)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcH
Confidence 356678899999999999997653 346789999999999988764
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=87.70 E-value=0.42 Score=54.45 Aligned_cols=44 Identities=27% Similarity=0.490 Sum_probs=36.3
Q ss_pred hHHHHHHHHHhceeEEEEeccCC---CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNK---TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~---~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.+..+++++|.+.. ..+..||||.|.||+|+..+.
T Consensus 394 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~ 440 (454)
T cd07101 394 GARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGA 440 (454)
T ss_pred HHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchH
Confidence 46778899999999999997542 346689999999999988764
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=87.68 E-value=0.54 Score=67.10 Aligned_cols=68 Identities=22% Similarity=0.410 Sum_probs=60.8
Q ss_pred hhHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 155 IIPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
+...|..||+.+|.. .|.-+.|||..|..|+..+||+.++++..++.+.-.++|-+++..++.+.+..
T Consensus 1031 ~e~~l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~~ 1099 (3956)
T PRK12467 1031 LEKRLAAIWADVLKVERVGLTDNFFELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVAA 1099 (3956)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCchhccCccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHHhhh
Confidence 344579999999987 89999999999999999999999999999999999999999999998776643
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=87.66 E-value=0.48 Score=54.49 Aligned_cols=44 Identities=43% Similarity=0.853 Sum_probs=37.3
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.+..+++++|.+....+..||||.|.||+|+..+.
T Consensus 422 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~ 465 (481)
T cd07143 422 INNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGE 465 (481)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHH
Confidence 55688899999999999998655566789999999999987764
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.48 E-value=1.4 Score=50.49 Aligned_cols=43 Identities=35% Similarity=0.618 Sum_probs=35.4
Q ss_pred HHHHHHHHHhceeEEEEeccC--CCCCCCCCCCCccCCCCCCCCC
Q psy15158 665 NKAMYFVDKIDSGTVFINTYN--KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 665 ~~~~~ftr~~~~ktV~iN~~~--~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
..+.++.+++..++|++|... ......||+|.|+||+|++.+.
T Consensus 409 ~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~ 453 (472)
T COG1012 409 ARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGK 453 (472)
T ss_pred HHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchH
Confidence 667788888999999999764 3456689999999999977654
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=87.37 E-value=0.54 Score=53.49 Aligned_cols=45 Identities=47% Similarity=0.937 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+.|++|.+.......||||.|.||+|+..+.
T Consensus 393 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~ 437 (453)
T cd07115 393 DLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGR 437 (453)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchH
Confidence 456788899999999999997666667799999999999987664
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=87.33 E-value=0.57 Score=53.12 Aligned_cols=45 Identities=29% Similarity=0.366 Sum_probs=36.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccC--CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN--KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~--~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+. ...+..||||.|.||+|+..+.
T Consensus 374 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 420 (434)
T cd07133 374 DKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGK 420 (434)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCH
Confidence 34667889999999999999764 2346799999999999988764
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PRK09184 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=87.31 E-value=1.3 Score=38.95 Aligned_cols=53 Identities=17% Similarity=0.325 Sum_probs=43.2
Q ss_pred hhHHHHHHHhhhcc------cCcCCCccccc--cCCCcchhHHHHHHHHhhcCceeccccc
Q psy15158 155 IIPVLKTIWAGILN------SEVSEDTDFFQ--SGAGSMDVVRLIEEIKENLQITLQNEDV 207 (709)
Q Consensus 155 ~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ne~v 207 (709)
+.++|+.+=...|. .+|..+|.||. -|..|+|.|-|+-++.+.+++++..++.
T Consensus 7 l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~ 67 (89)
T PRK09184 7 LERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNP 67 (89)
T ss_pred HHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcch
Confidence 45566776666553 38999999988 6999999999999999999999976543
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=87.06 E-value=0.47 Score=54.29 Aligned_cols=45 Identities=40% Similarity=0.739 Sum_probs=37.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
....+.+|.+.+..+.+++|... ..+..||||.|.||+|+.++.+
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~ 458 (471)
T cd07139 414 DVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPE 458 (471)
T ss_pred CHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHH
Confidence 35678889999999999999755 5567999999999999887653
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=86.79 E-value=0.59 Score=53.13 Aligned_cols=44 Identities=32% Similarity=0.502 Sum_probs=36.8
Q ss_pred hHHHHHHHHHhceeEEEEeccCCC-CCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~-~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.++.+.+++|.+... ....||||.|.||+|+.++.
T Consensus 394 ~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~ 438 (452)
T cd07147 394 LEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVR 438 (452)
T ss_pred HHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChH
Confidence 567889999999999999976533 45689999999999988765
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >smart00823 PKS_PP Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Probab=86.74 E-value=1.2 Score=36.85 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=48.0
Q ss_pred hhhhHHHHHHHhhhccc---C-cCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhh
Q psy15158 153 EAIIPVLKTIWAGILNS---E-VSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRD 215 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~ 215 (709)
..+...++..|...+.. + ++.+++||..|..|+.++.+...+.+..++++.-..++.+++...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~ 77 (86)
T smart00823 11 RLLLDLVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAA 77 (86)
T ss_pred HHHHHHHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHH
Confidence 34456678888887765 2 488999999999999999999888888777776666665555444
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=86.55 E-value=0.67 Score=52.70 Aligned_cols=45 Identities=24% Similarity=0.302 Sum_probs=36.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-C-CCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-T-DVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~-~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.+|.+.++.+++++|.+.. . ....||||.|.||+|+.++.
T Consensus 366 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 412 (443)
T cd07132 366 NKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGK 412 (443)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccH
Confidence 456788899999999999997642 2 36689999999999988764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=86.39 E-value=0.59 Score=53.27 Aligned_cols=45 Identities=40% Similarity=0.772 Sum_probs=37.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..+.+++|......+..||||.|.||+|++.+.
T Consensus 399 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~ 443 (457)
T cd07114 399 DLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGI 443 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchH
Confidence 356778899999999999997665667789999999999987664
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=86.06 E-value=0.67 Score=52.91 Aligned_cols=44 Identities=36% Similarity=0.598 Sum_probs=37.4
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.++.+.+++|......+..||+|.|.||+|+..+.
T Consensus 402 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~ 445 (459)
T cd07089 402 VDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGI 445 (459)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchH
Confidence 56778899999999999997766667789999999999987654
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=85.87 E-value=0.63 Score=53.33 Aligned_cols=45 Identities=29% Similarity=0.589 Sum_probs=36.9
Q ss_pred hHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCC-CCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFG-KDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g-~~~~~~ 708 (709)
...+.++.+.+..+++++|.+. ...+..||||.|.||+| ++++.+
T Consensus 414 ~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~ 460 (473)
T cd07097 414 LKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEA 460 (473)
T ss_pred HHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHH
Confidence 4667889999999999999754 44567899999999999 777653
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=85.86 E-value=0.84 Score=65.75 Aligned_cols=71 Identities=23% Similarity=0.370 Sum_probs=59.4
Q ss_pred ccChhHhhhhHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 147 VLTESEEAIIPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..|+-|+. |+.||+.+|.. .|.-+.|||..|..|+-.+||+-.+.+..++++.=-++|.+++..++-..+.
T Consensus 4238 p~~~~e~~----l~~iw~~vL~~~~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~~ 4309 (4334)
T PRK05691 4238 PRNELEQT----LATIWADVLKVERVGVHDNFFELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYIE 4309 (4334)
T ss_pred CCCHHHHH----HHHHHHHHhCCCcCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHHh
Confidence 34554444 69999999997 7899999999999999999999999888888887779998888888766554
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=85.84 E-value=0.74 Score=52.48 Aligned_cols=45 Identities=24% Similarity=0.339 Sum_probs=36.3
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+++++|.+.. ..+..||||.|.||+|+..+.
T Consensus 366 d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 412 (449)
T cd07136 366 DKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGK 412 (449)
T ss_pred CHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCH
Confidence 345678889999999999997543 336789999999999987664
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=85.57 E-value=0.69 Score=52.27 Aligned_cols=44 Identities=25% Similarity=0.300 Sum_probs=36.0
Q ss_pred hHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.+..+++++|.... .....||||.|.||+|++.+.
T Consensus 367 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 412 (426)
T cd07087 367 KAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGK 412 (426)
T ss_pred HHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCH
Confidence 45678889988899999997642 346799999999999988764
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.52 E-value=0.64 Score=54.05 Aligned_cols=46 Identities=33% Similarity=0.506 Sum_probs=37.1
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC---CCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK---TDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~---~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
....+.++.++++.+.+++|.... ..+..||||.|.||+|+.++.+
T Consensus 429 d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 477 (524)
T PRK09407 429 DTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAE 477 (524)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHH
Confidence 456788899999999999997543 3456899999999999887653
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=85.38 E-value=0.69 Score=53.36 Aligned_cols=44 Identities=27% Similarity=0.442 Sum_probs=35.8
Q ss_pred hHHHHHHHHHhceeEEEEeccC-C-CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYN-K-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~-~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.+..+.+++|.+. + .....||||.|.||+|+.+++
T Consensus 378 ~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~ 423 (493)
T PTZ00381 378 KRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGK 423 (493)
T ss_pred HHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchH
Confidence 4556788899999999999764 3 346799999999999987664
|
|
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.33 E-value=1 Score=51.79 Aligned_cols=44 Identities=32% Similarity=0.336 Sum_probs=36.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLD 706 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~ 706 (709)
-...+.++.+.+..+++++|.+. ......||||.|.||+|++++
T Consensus 411 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g 455 (487)
T PRK09457 411 DREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSA 455 (487)
T ss_pred CHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCc
Confidence 34667889999999999999654 344568999999999999876
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=85.30 E-value=0.77 Score=52.50 Aligned_cols=44 Identities=32% Similarity=0.588 Sum_probs=36.7
Q ss_pred hHHHHHHHHHhceeEEEEeccCCC-CCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~-~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.+..+++++|..... .+..||||.|.||+|+..+.
T Consensus 405 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~ 449 (465)
T cd07151 405 LERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGE 449 (465)
T ss_pred HHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChH
Confidence 566888999999999999976533 46689999999999998764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=85.16 E-value=0.71 Score=52.74 Aligned_cols=45 Identities=27% Similarity=0.449 Sum_probs=37.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.+|.+.++.+.+++|.........||+|.|.||+|++.+.
T Consensus 410 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~ 454 (468)
T cd07088 410 NLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGK 454 (468)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchH
Confidence 356788999999999999997654445579999999999988764
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=85.05 E-value=0.71 Score=52.59 Aligned_cols=45 Identities=36% Similarity=0.622 Sum_probs=36.7
Q ss_pred hHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...+.++.+.+..+.+++|.... .....||||.|.||+|+..+.+
T Consensus 398 ~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~ 443 (456)
T cd07145 398 INRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRY 443 (456)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHH
Confidence 56788899989999999996543 3356899999999999887753
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=85.04 E-value=0.83 Score=51.85 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=37.3
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-C-CCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-K-TDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~-~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.+..+.+++|... . ..+..||||.|.||+|+..+.+
T Consensus 376 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 423 (436)
T cd07135 376 DKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKY 423 (436)
T ss_pred CHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHh
Confidence 45667889999999999999754 2 3567999999999999987653
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=85.01 E-value=0.81 Score=51.97 Aligned_cols=45 Identities=31% Similarity=0.536 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+.+++|.... .....||||.|.||+|+.++.
T Consensus 394 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~ 439 (453)
T cd07149 394 DLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPR 439 (453)
T ss_pred CHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChH
Confidence 356678899999999999997653 345689999999999987764
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=84.94 E-value=0.81 Score=52.69 Aligned_cols=45 Identities=27% Similarity=0.387 Sum_probs=36.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+.|++|.+.. .....||||.|.||+|+.++.
T Consensus 382 d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~ 428 (484)
T PLN02203 382 NEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGK 428 (484)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccH
Confidence 355678899999999999997642 345689999999999988764
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=84.77 E-value=0.87 Score=51.57 Aligned_cols=45 Identities=29% Similarity=0.333 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..+.+++|... ..+...||||.|.||+|++++.
T Consensus 373 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~ 418 (431)
T cd07095 373 DEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAY 418 (431)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCCCChH
Confidence 35677889999999999999654 3455689999999999998764
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=84.75 E-value=0.78 Score=52.09 Aligned_cols=45 Identities=38% Similarity=0.629 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..+.+++|......+..||+|.|.||+|+..+.
T Consensus 393 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~ 437 (451)
T cd07103 393 DLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGK 437 (451)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchH
Confidence 356688899999999999998765567789999999999987664
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=84.56 E-value=0.81 Score=52.53 Aligned_cols=45 Identities=27% Similarity=0.524 Sum_probs=37.0
Q ss_pred ChHHHHHHHHH--hceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDK--IDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~--~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++ +..+++++|... ......||||.|.||+|+..+.
T Consensus 414 d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~ 461 (478)
T cd07086 414 DLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGS 461 (478)
T ss_pred CHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchH
Confidence 35678889999 889999999764 3456789999999999988664
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=84.43 E-value=0.89 Score=52.07 Aligned_cols=44 Identities=39% Similarity=0.437 Sum_probs=36.1
Q ss_pred hHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.++.+++++|.+. ......||||.|.||+|+..+.
T Consensus 414 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~ 458 (473)
T cd07082 414 INKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIG 458 (473)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChH
Confidence 5677889999999999999765 3334589999999999987664
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=84.20 E-value=0.88 Score=65.02 Aligned_cols=66 Identities=21% Similarity=0.416 Sum_probs=58.9
Q ss_pred hHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 156 IPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
...|..||+.+|.. .|.-++|||..|..|+..+||+.++++.+++++.=.++|.+++..++...+.
T Consensus 3607 e~~l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~ 3673 (3956)
T PRK12467 3607 EQQLAAIWADVLGVEQVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSP 3673 (3956)
T ss_pred HHHHHHHHHHHhCCCCCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHh
Confidence 34579999999997 7899999999999999999999999999998888899999999998876654
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=84.14 E-value=0.89 Score=51.53 Aligned_cols=45 Identities=27% Similarity=0.390 Sum_probs=36.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+.+++|.... ..+..||||.|+||+|++.+.
T Consensus 373 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 419 (433)
T cd07134 373 DKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGV 419 (433)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcH
Confidence 355678889999999999997542 346789999999999987664
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=84.09 E-value=1.2 Score=51.23 Aligned_cols=44 Identities=32% Similarity=0.323 Sum_probs=36.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLD 706 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~ 706 (709)
-...+.++.+.+..+++++|.+. +.....||||.|.||+|++++
T Consensus 409 d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g 453 (484)
T TIGR03240 409 DRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSA 453 (484)
T ss_pred CHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCc
Confidence 35677889999999999999654 445668999999999999876
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=84.04 E-value=0.98 Score=51.84 Aligned_cols=45 Identities=31% Similarity=0.299 Sum_probs=36.1
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCC-CCCCCCCCCccCCCC--CCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFG--KDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~-~~~~Pf~g~k~Sg~g--~~~~~ 707 (709)
....+.++.+.++.++|++|.+... ....||||.|.||+| ++++.
T Consensus 415 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~ 462 (478)
T cd07085 415 SGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGK 462 (478)
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChH
Confidence 4567889999999999999976433 456899999999999 45553
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=84.03 E-value=0.96 Score=51.29 Aligned_cols=45 Identities=29% Similarity=0.358 Sum_probs=36.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+.+++|.+.. .....||||.|.||+|+..+.
T Consensus 372 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 418 (432)
T cd07137 372 NKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGK 418 (432)
T ss_pred CHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccH
Confidence 356778899999999999997543 346789999999999987654
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=83.80 E-value=0.94 Score=51.66 Aligned_cols=45 Identities=29% Similarity=0.414 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCC-CCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~-~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.+|.+.++.+.+++|.+... ....||||.|.||+|++++.
T Consensus 396 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~ 441 (455)
T cd07148 396 DLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIP 441 (455)
T ss_pred CHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchH
Confidence 4567889999999999999976533 34579999999999987664
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=83.68 E-value=1.1 Score=54.14 Aligned_cols=43 Identities=30% Similarity=0.387 Sum_probs=36.1
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCC--CCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGF--GKDL 705 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~--g~~~ 705 (709)
-...+.+|.++++.++|++|.+.......||||.|+||+ ||..
T Consensus 633 d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~ 677 (718)
T PLN02418 633 DSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIH 677 (718)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCC
Confidence 467889999999999999998765455689999999999 8653
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=83.07 E-value=1.1 Score=50.67 Aligned_cols=45 Identities=33% Similarity=0.626 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+.+++|.+. +..+..||+|.|.||+|+..+.
T Consensus 373 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~ 418 (432)
T cd07105 373 DLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGK 418 (432)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccccChH
Confidence 35567889999999999999765 3356799999999999987664
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=82.97 E-value=1 Score=50.86 Aligned_cols=45 Identities=36% Similarity=0.620 Sum_probs=37.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+.+..+.+++|.... .....||||.|.||+|+..+.
T Consensus 372 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~ 417 (431)
T cd07104 372 DLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGP 417 (431)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCccchH
Confidence 357888999999999999997653 346789999999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.94 E-value=1.3 Score=64.85 Aligned_cols=65 Identities=18% Similarity=0.372 Sum_probs=57.2
Q ss_pred HHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 157 PVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
..|..||+.+|.. .|.-+.|||..|..|+-.+||+..+++. ++.+.=.++|.+++..++.+..+.
T Consensus 3559 ~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~-g~~~~~~~~f~~~ti~~la~~~~~ 3624 (5163)
T PRK12316 3559 RRLAAIWADVLKLEQVGLTDNFFELGGDSIISLQVVSRARQA-GIRFTPKDLFQHQTIQGLARVARV 3624 (5163)
T ss_pred HHHHHHHHHHhCCCCCCCCCCchhcCCccHHHHHHHHHHHHc-CCCCCHHHHhcCCCHHHHHHHHhh
Confidence 3469999999987 7899999999999999999999999887 888877899999999999876543
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=82.74 E-value=1.2 Score=52.56 Aligned_cols=45 Identities=24% Similarity=0.079 Sum_probs=36.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCC--CCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFG--KDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g--~~~~~ 707 (709)
-...+.++.+++..++|++|.+. ......||||.|.||+| +.++.
T Consensus 527 d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~ 574 (604)
T PLN02419 527 SGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGK 574 (604)
T ss_pred CHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHH
Confidence 45667888999999999999764 33466899999999999 56553
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=82.65 E-value=1.1 Score=51.22 Aligned_cols=44 Identities=36% Similarity=0.620 Sum_probs=36.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.+.+++|... ..+..||+|.|.||+|+..+.
T Consensus 409 d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~ 452 (466)
T cd07138 409 DPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGR 452 (466)
T ss_pred CHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchH
Confidence 35678889999999999999753 456789999999999988764
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.65 E-value=1.1 Score=51.60 Aligned_cols=45 Identities=40% Similarity=0.560 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.+|.+.++.+++++|.... .....||||.|.||+|+.++.
T Consensus 427 d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~ 472 (496)
T PLN00412 427 DINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGIT 472 (496)
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChH
Confidence 356788999999999999997643 334689999999999987764
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=82.63 E-value=1.2 Score=50.99 Aligned_cols=45 Identities=33% Similarity=0.651 Sum_probs=36.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCC-CCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFG-KDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g-~~~~~ 707 (709)
-...+.+|.+.++.+++++|.... ..+..||||.|.||+| ++.+.
T Consensus 415 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~ 461 (478)
T cd07131 415 DVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGT 461 (478)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcH
Confidence 456788999999999999997654 4567999999999999 66554
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=82.21 E-value=1.4 Score=50.29 Aligned_cols=44 Identities=34% Similarity=0.610 Sum_probs=36.3
Q ss_pred hHHHHHHHHHhceeEEEEeccC-C-CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYN-K-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~-~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
.+.+.++.+.++.+.+++|.+. + .....||||.|.||+|++.+.
T Consensus 404 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~ 449 (465)
T cd07098 404 IKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGE 449 (465)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChH
Confidence 5678889999999999999753 3 346799999999999988764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=81.92 E-value=0.52 Score=53.82 Aligned_cols=45 Identities=36% Similarity=0.613 Sum_probs=36.1
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCC-CCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~-~Pf~g~k~Sg~g~~~~~~ 708 (709)
...++++.+++..+++++|........ .||+|.|+||+|+..+.+
T Consensus 406 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~ 451 (462)
T PF00171_consen 406 ESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPE 451 (462)
T ss_dssp HHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHH
T ss_pred ccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHH
Confidence 567889999999999999987644444 599999999999887643
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=81.76 E-value=7.4 Score=44.75 Aligned_cols=101 Identities=19% Similarity=0.164 Sum_probs=70.3
Q ss_pred CCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCc
Q psy15158 379 RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTG 458 (709)
Q Consensus 379 ~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g 458 (709)
.|.++.+.....|+|-|+|+.+ +......+++.+|++||.|++-+.+.. +.++ ..+|.++-..+.-.
T Consensus 631 GptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~--~~l~~~v~~~~~~~- 697 (769)
T COG4230 631 GPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALL--KDLPSAVASRIQVA- 697 (769)
T ss_pred CCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHH--Hhchhhhhhheeec-
Confidence 4567778889999999999954 667778899999999999998665421 1221 13566553222111
Q ss_pred hhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCC
Q psy15158 459 AVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLK 496 (709)
Q Consensus 459 ~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k 496 (709)
... ...-.++.+.|.|..+-.+.+.+..+.++++
T Consensus 698 ---~~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gp 731 (769)
T COG4230 698 ---KDW-TADIPFDAVLFHGDSDRLRALCEAIAARDGP 731 (769)
T ss_pred ---cch-hhccceeeEEecCCHHHHHHHHHHHhcCCCC
Confidence 112 3444578999999999999999988875543
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=81.36 E-value=1.3 Score=50.25 Aligned_cols=45 Identities=31% Similarity=0.572 Sum_probs=36.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCC-CCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFG-KDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g-~~~~~ 707 (709)
-...+.++.+.+..+.+++|.+. ......||||.|.||+| ++.+.
T Consensus 383 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~ 429 (443)
T cd07152 383 DVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGP 429 (443)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcH
Confidence 35678889999999999999754 33467999999999999 66554
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=80.93 E-value=1.3 Score=50.82 Aligned_cols=45 Identities=27% Similarity=0.515 Sum_probs=35.0
Q ss_pred ChHHHHHHHHH--hceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDK--IDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~--~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....+.++.+. +..+++++|... ......||||.|.||+|+..+.
T Consensus 410 d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~ 457 (474)
T cd07130 410 DLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457 (474)
T ss_pred CHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchH
Confidence 35667778765 678999999754 4456789999999999988764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=80.83 E-value=1.7 Score=50.62 Aligned_cols=44 Identities=18% Similarity=0.201 Sum_probs=33.9
Q ss_pred ChHHHHHHHHHh--ceeEEEEeccC---------CCCCCCCCCCCccCCCCCCCC
Q psy15158 663 DINKAMYFVDKI--DSGTVFINTYN---------KTDVAAPFGGFKQSGFGKDLD 706 (709)
Q Consensus 663 G~~~~~~ftr~~--~~ktV~iN~~~---------~~~~~~Pf~g~k~Sg~g~~~~ 706 (709)
....+.++.+.+ ..++|++|... ...+..||+|.|.||+|++.+
T Consensus 436 d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g 490 (521)
T PRK11903 436 DAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELG 490 (521)
T ss_pred CHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccc
Confidence 345677888887 78999999642 233568999999999998754
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=80.78 E-value=1.6 Score=49.67 Aligned_cols=44 Identities=32% Similarity=0.471 Sum_probs=36.7
Q ss_pred hHHHHHHHHHhceeEEEEeccC-C-CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYN-K-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~-~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+.++.+.+++|... . .....||||.|.||+|+..+.
T Consensus 394 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~ 439 (453)
T cd07099 394 LARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGA 439 (453)
T ss_pred HHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChH
Confidence 5678889999999999999754 2 346799999999999988764
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=80.73 E-value=7.2 Score=45.04 Aligned_cols=42 Identities=21% Similarity=0.237 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHhceeEE--EEeccCCC-CCC---CCCCCCccCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTV--FINTYNKT-DVA---APFGGFKQSGFGKD 704 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV--~iN~~~~~-~~~---~Pf~g~k~Sg~g~~ 704 (709)
-...+.++.+.++.+++ .+|..... +.+ .||||.|.||+|++
T Consensus 424 d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~ 471 (489)
T cd07126 424 DIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTP 471 (489)
T ss_pred CHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCH
Confidence 35677889999999994 57765433 332 99999999999975
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 709 | ||||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-161 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-161 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-161 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-160 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-160 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-160 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-103 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-103 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-102 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 8e-97 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 8e-97 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-96 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-96 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-96 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 3e-96 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-95 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 2e-95 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 2e-95 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-87 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-86 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-86 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-86 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-85 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-85 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 4e-80 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-77 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 5e-76 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 1e-75 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-74 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-69 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-69 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 9e-67 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-66 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-66 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 4e-66 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 6e-66 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-65 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 9e-64 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-61 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 9e-61 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-60 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-59 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 2e-59 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-57 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-57 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 5e-57 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-53 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 3e-50 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 5e-49 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-48 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 6e-48 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-46 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-45 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 5e-45 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 5e-43 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-42 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-42 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 5e-42 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 9e-42 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-41 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 2e-41 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-39 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-38 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-38 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 9e-37 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-36 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 4e-35 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 5e-34 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-33 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-33 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 3e-33 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 3e-33 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-32 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-28 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-28 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-27 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-25 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-22 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 6e-22 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 1e-21 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-20 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-16 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-16 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-15 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-14 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-12 | ||
| 2cq8_A | 110 | Solution Structure Of Rsgi Ruh-033, A Pp-Binding Do | 2e-11 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 4e-08 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 2e-05 |
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|2CQ8|A Chain A, Solution Structure Of Rsgi Ruh-033, A Pp-Binding Domain Of 10-Fthfdh From Human Cdna Length = 110 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 709 | |||
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 1e-180 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 1e-179 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-174 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-171 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-169 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-164 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-164 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-164 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-161 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-151 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-149 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-149 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-137 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-130 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-129 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-129 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-129 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-128 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-128 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-125 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-123 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-118 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-117 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-116 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-102 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 4e-90 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 7e-86 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 2e-78 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 5e-78 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 7e-78 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 2e-62 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 2e-48 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 5e-45 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 2e-23 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-11 | |
| 3rfo_A | 317 | Methionyl-tRNA formyltransferase; structural genom | 7e-07 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 8e-06 | |
| 1fmt_A | 314 | Methionyl-tRNA FMet formyltransferase; initiator t | 1e-05 | |
| 3tqq_A | 314 | Methionyl-tRNA formyltransferase; protein synthesi | 2e-05 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 9e-05 | |
| 2bln_A | 305 | Protein YFBG; transferase, formyltransferase, L-AR | 1e-04 | |
| 1zgh_A | 260 | Methionyl-tRNA formyltransferase; southeast collab | 2e-04 |
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 670 bits (1730), Expect = 0.0
Identities = 282/490 (57%), Positives = 358/490 (73%), Gaps = 51/490 (10%)
Query: 224 SRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQ 283
+ D ++ ++ VNK+ + P QLFI GEFV++ G + INP + S IC V
Sbjct: 10 TTGEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVS 69
Query: 284 MANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAV 342
+A DVD A AA++AFE G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAV
Sbjct: 70 LAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAV 129
Query: 343 YTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWN 402
YTLALKTHVGMSI T++YFAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWN
Sbjct: 130 YTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWN 189
Query: 403 YPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTG 462
YPLMMLSWK A CLAAGNTVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G
Sbjct: 190 YPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVG 249
Query: 463 EAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRM 522
+ +S H +RK+GFTGST G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M
Sbjct: 250 QRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQM 309
Query: 523 SMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAH 567
M VFFNKGENCI+AGR+FV+ +I++ F++KVV EV+KM NH+AH
Sbjct: 310 GMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAH 369
Query: 568 LDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------------------- 596
L KL++YC++ EGA L+ GG ++ RPG
Sbjct: 370 LRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISR 429
Query: 597 ----DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGG 652
DVDAV+ RAN+TE+GLASG+FT DINKA+Y DK+ +GTVFINTYNKTDVAAPFGG
Sbjct: 430 FADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGG 489
Query: 653 FKQSGFGKDL 662
FKQSGFGKDL
Sbjct: 490 FKQSGFGKDL 499
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 651 bits (1681), Expect = 0.0
Identities = 182/470 (38%), Positives = 260/470 (55%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPI----DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K + K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGL 612
L GG G ++ V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 649 bits (1677), Expect = 0.0
Identities = 196/463 (42%), Positives = 274/463 (59%), Gaps = 54/463 (11%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSR 307
++FIN E+ +SV G NPA E +C V+ + +DVD A AA +AF+ W
Sbjct: 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRT 79
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
+ A +RG L+ KLADL+E+++ LAT+E+++ G +++ A +G I T +Y AGW DK
Sbjct: 80 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 139
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
I G TIP+ + FT+T+ EP+GVCG I PWN+PL+M WK+ P L+ GNTVV+KP+
Sbjct: 140 IQGRTIPM----DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 428 EVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
E +PLTAL + L AGFP GV+NI+PG G G AIS H+ + KV FTGST G I
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI 547
++A +SNLK+VSLELGGKSP ++F D +LD AV + GVF+++G+ CI+A R+FV+ +I
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 548 YDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL 592
YD F+ + V KK K +K++D E K EGA+L GG
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 593 DRPG---------------------------------DVDAVIKRANSTEYGLASGIFTS 619
G +D VIKRAN+T YGL++GIFT+
Sbjct: 376 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTN 435
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
DI+KA+ + SGTV++N Y+ PFGGFK SG G++L
Sbjct: 436 DIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGREL 478
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 619 bits (1600), Expect = 0.0
Identities = 164/472 (34%), Positives = 245/472 (51%), Gaps = 60/472 (12%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
+ FI+G++V G+ E I PA I + A V+ A +A++A
Sbjct: 7 TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ- 65
Query: 303 GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFA 362
EW+ +S RG ++ + AD+M + + L+T+E+LD+G + D +++F
Sbjct: 66 KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFG 125
Query: 363 GWC-DKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT 421
G + G IP+ +F +TKR P+GVC I WNYP + WK AP L AGN
Sbjct: 126 GIAPSALNGDYIPL-----GGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNA 180
Query: 422 VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTV 481
+V KPSE +PL ALK+AE+ + AG PKG+ N++ G TG + H + KV TGS
Sbjct: 181 MVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRD-TGPLLVNHPDVAKVSLTGSVP 239
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
TG K+ +AA +LK V++ELGGKSP+++FDD +++ AV +M G F++ G+ C + R+
Sbjct: 240 TGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRV 298
Query: 542 FVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLL 586
FV FLE + + M KA +K++ Y EK K+EGA L+
Sbjct: 299 FVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLI 358
Query: 587 IGGKRLDRPG------------------------------------DVDAVIKRANSTEY 610
GG + D D V+ RAN+TE+
Sbjct: 359 TGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEF 418
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
GLA G+FT+D+ +A VD +++GT++INTYN V PFGG KQSGFG++
Sbjct: 419 GLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGREN 470
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 615 bits (1589), Expect = 0.0
Identities = 171/489 (34%), Positives = 263/489 (53%), Gaps = 60/489 (12%)
Query: 229 VSNQLNHESIKLNVNKMD--VSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMAN 286
L E++ N M+ + +I+GE+V S ++ + INP N+ I +V
Sbjct: 9 SGVDLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGT 68
Query: 287 SDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTL 345
+D + A LAA +AFE GEWS+ +A RG + +AD +++++E LA +E+LD+G
Sbjct: 69 KEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE 128
Query: 346 ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPL 405
+ + + + YFAG DK G I P++ + +EP+GV ITPWNYPL
Sbjct: 129 S-YADMDDIHNVFMYFAGLADKDGGEMIDSP--IPDT-ESKIVKEPVGVVTQITPWNYPL 184
Query: 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAI 465
+ SWK+AP LA G ++VMKPSE++PLT +++ EL GFPKG IN++ G G+ G+ +
Sbjct: 185 LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVM 244
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG 525
S H ++ V FTG TG IMK+AA +N+ ++LELGGK+P +IFDD + + AV ++
Sbjct: 245 SGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALN 303
Query: 526 GVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDK 570
G +F+ G+ C + RI V ++I D F + ++ VKK+ H +K
Sbjct: 304 GGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNK 363
Query: 571 LIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------- 596
+ Y + AK+EGA + +GGKR DR
Sbjct: 364 IESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423
Query: 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGF 653
I+ AN + YGLA +F+ DI KA +K+ GTV+IN ++ AP+GG+
Sbjct: 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGY 483
Query: 654 KQSGFGKDL 662
KQSG G++L
Sbjct: 484 KQSGIGREL 492
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 611 bits (1577), Expect = 0.0
Identities = 159/475 (33%), Positives = 250/475 (52%), Gaps = 63/475 (13%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMEC-INPANESTICSVQMANSDDVDIAALAAEKAF 301
V + + G + S G++ E PA +C + +++VD A +A+ A+
Sbjct: 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY 71
Query: 302 EGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYF 361
+WS+++ +R +M + A ++ + ++ +A +E +++G T A + + + +Y+
Sbjct: 72 L-KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYY 129
Query: 362 AGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT 421
AG + G I + P F +T+REP+GVC I WNYP M+ +WK AP LA GN
Sbjct: 130 AGLAPTLSGQHIQL----PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNA 185
Query: 422 VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTV 481
VV KPS ++P+T + LAE+ AG P G++N++ G GA TG + H + KV FTGS
Sbjct: 186 VVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVP 244
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
TG K+M+ +A +K V+LELGGKSPL+IF D L+ AVR ++ F +G+ C + R+
Sbjct: 245 TGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRV 303
Query: 542 FVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLL 586
FV I FLE+VV K + K LDK++ + +AK EGAR+L
Sbjct: 304 FVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVL 363
Query: 587 IGGKRLDRPG---------------------------------------DVDAVIKRANS 607
GG+ L + V++RAN+
Sbjct: 364 CGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANN 423
Query: 608 TEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
T +GLASG+FT DI++A +++GT +INTY+ + V PFGG+K SGFG++
Sbjct: 424 TTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGREN 478
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 608 bits (1571), Expect = 0.0
Identities = 157/473 (33%), Positives = 238/473 (50%), Gaps = 57/473 (12%)
Query: 245 MDVSFPN-QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE- 302
MD+ P QLFING++ V + INPA ++ I + A +DVD+A AA+ A
Sbjct: 1 MDIPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTR 60
Query: 303 ---GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWK 359
+W+ S R + +A + + K ELA +ES+D G A + ++
Sbjct: 61 NKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFE 119
Query: 360 YFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAG 419
Y+A +K+ ++ + REPIGV GLITPWNYP++M +WK+AP LAAG
Sbjct: 120 YYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAG 179
Query: 420 NTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGS 479
++KPSE++ LT L+L E+ G P GV+NIL G G G ++ H + KV FTGS
Sbjct: 180 CAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGS 239
Query: 480 TVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAG 539
+ TG KIM +AA+ +K VSLELGGKSPLV+F+D +LDKA ++ G F+ G+ C +
Sbjct: 240 SATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATS 298
Query: 540 RIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGAR 584
R+ + +I FL ++V +K + + +K++ + AKSEGA
Sbjct: 299 RLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGAT 358
Query: 585 LLIGGKRLDRPG-----------------------------------DVDAVIKRANSTE 609
+L GG R + + I AN T
Sbjct: 359 ILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTV 418
Query: 610 YGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
YGL + + ++D+ + +G V++N AP+GG K+SGFG++L
Sbjct: 419 YGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGREL 471
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 602 bits (1554), Expect = 0.0
Identities = 150/470 (31%), Positives = 246/470 (52%), Gaps = 56/470 (11%)
Query: 244 KMDVSFPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFE 302
++ + Q+ ++G+ V++ GS+++ ++P + + + A++DDV A AA KAF+
Sbjct: 16 RLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFD 75
Query: 303 -GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYF 361
G W R+S +R LMFK+ADL+ +EELA IESL+ G A + +G D W Y
Sbjct: 76 AGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYA 134
Query: 362 AGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT 421
AG + G T + REP+GV G+ITPWN+P ++ S ++ + +G T
Sbjct: 135 AGQARALEGQTHN---NIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCT 191
Query: 422 VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTV 481
VV+KPSE + T+++LAEL+ AG P GV N++ G G G+ +++ + V FTGS
Sbjct: 192 VVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVR 251
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
G K+ + AA +K+V LELGGK P ++F D +LD A GV+ N G+ CIS R+
Sbjct: 252 VGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL 310
Query: 542 FVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLL 586
V I DA +E+++ +K+ +AH +K+ Y + GA LL
Sbjct: 311 LVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELL 370
Query: 587 IGGKRLDRPG----------------------------------DVDAVIKRANSTEYGL 612
+GG+R+ R D + AN+TE+GL
Sbjct: 371 LGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGL 430
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
++ ++++++ A+ + +I +G +IN+ P GG+K+SG G++L
Sbjct: 431 SASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL 480
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 587 bits (1517), Expect = 0.0
Identities = 154/470 (32%), Positives = 244/470 (51%), Gaps = 56/470 (11%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
+ K ++L INGE V+ G NPA + + A+++ VD A AA+ AF
Sbjct: 15 LYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAF 73
Query: 302 EGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYF 361
EW + + + R + KLAD++E+N + A +ES + G A + +D +++F
Sbjct: 74 -AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFF 132
Query: 362 AGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNT 421
AG + G + + +R+P+GV I PWNYPLMM +WK+AP LAAGN
Sbjct: 133 AGAARCLNGLAAGEY---LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNC 189
Query: 422 VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTV 481
VV+KPSE++PLTALKLAEL+ FP GV+NIL G G G+ ++ H K+R V TGS
Sbjct: 190 VVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIA 248
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
TG I+ A S++K+ +ELGGK+P+++FDD +++ V ++N G++C +A RI
Sbjct: 249 TGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRI 307
Query: 542 FVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEG-ARL 585
+ IYD +EK+ V + + AHL+++ E+AK+ G ++
Sbjct: 308 YAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKV 367
Query: 586 LIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGL 612
+ GG++ G + + V+ AN ++YGL
Sbjct: 368 ITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
AS ++T D+ +A ++ G ++NT+ P GG K SG+GKD+
Sbjct: 428 ASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 477
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 585 bits (1510), Expect = 0.0
Identities = 154/469 (32%), Positives = 246/469 (52%), Gaps = 63/469 (13%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLS 309
P FI GEFV S G + ++PA + +VD AA AA +AF+ WSR
Sbjct: 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ-RWSRTK 84
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
A++R + ++A+L+E++ +ELA +E LD+G V + + V + + + ++A + + +
Sbjct: 85 AKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIV-RAQVARAAENFAFYAEYAEHAM 143
Query: 370 -GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
T P+ +T R P G G+ITPWN PLM+ +W++AP LA GNTVV+KP+E
Sbjct: 144 EDRTFPV----DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAE 199
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
SP TA KLAE+ A P GV N++ G G G A+ H + + TG T TG +M+
Sbjct: 200 WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+AA +LK++S ELGGKSP ++F D +L++A+ + +F GE C ++ R+ V+ I+
Sbjct: 260 NAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIF 318
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
+ F+ KVV + + H HL +++ Y E K EGARLL+GG+R
Sbjct: 319 EDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAK 378
Query: 594 RPG----------------------------------------DVDAVIKRANSTEYGLA 613
D + +++AN T+YGLA
Sbjct: 379 TSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLA 438
Query: 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+ +FT D+ +A ++++G V++N++N + PFGG K SG ++
Sbjct: 439 AYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREG 487
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 583 bits (1505), Expect = 0.0
Identities = 142/462 (30%), Positives = 226/462 (48%), Gaps = 56/462 (12%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLS 309
QL I F +NP + I + A+ +D A AAE+AF G WS+ +
Sbjct: 25 DTQLLIGSRFEAGTEAE-EHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVG-WSQTT 82
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
+R + + K+AD +E+ +E A +E+L+ G + ID W++FAG +
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
+ + +R+PIG+ G I PWNYPLMM++WK+AP + GNTVV KPSE
Sbjct: 143 APAAGEYLP---GHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQ 199
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
+PLTALKLA L P+GV+N++ G G G A+ H K+ V TG TG K++ +
Sbjct: 200 TPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
AA+ +K+ LELGGK+P++++ D +L+ V ++N G++C +A RI+ ++ IY+
Sbjct: 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 550 AFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEG-ARLLIGGKRLD 593
+ + + V + + D++ + E+A + + GG+
Sbjct: 318 KLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS 377
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G D + AN ++YGLAS ++T D
Sbjct: 378 DEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
I+KAM ++ G +INT+ P GG KQSG+GKD+
Sbjct: 438 ISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDM 479
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 524 bits (1352), Expect = 0.0
Identities = 138/464 (29%), Positives = 214/464 (46%), Gaps = 58/464 (12%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRL 308
++LFI G++ +E PA + V MA + DVD A AA AF+ G W
Sbjct: 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPST 67
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+R ++ ++ + K+ + + ++G T+ H S+ YFAG DK+
Sbjct: 68 PPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKV 127
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
+ + REP+GV G I WN PL + K+AP L AG T+V+KP+
Sbjct: 128 TWTETRTGSY----GQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTA LAE+ G P+GV++++PG G TG+A++ + I FTGS+ G ++ +
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGR 242
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
AAE LK +LELGGKS +I +D +L A+ M + N G+ C++ RI + Y
Sbjct: 243 RAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D + V V + + ++ Y K EGARL+ GG R +
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE 361
Query: 594 --------RP---------------------------GDVDAVIKRANSTEYGLASGIFT 618
+P + I AN + YGLA ++T
Sbjct: 362 GLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWT 421
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+D+ K + +I +GT IN Y D +PFGG+K SG G++
Sbjct: 422 TDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGREN 464
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 522 bits (1346), Expect = e-180
Identities = 131/464 (28%), Positives = 210/464 (45%), Gaps = 59/464 (12%)
Query: 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLS 309
+ +ING + + + I+P+ E + + ++ D D A AA+KAF+ W S
Sbjct: 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ-TWKTTS 83
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
+R + K+ ++ E+ ++A S++ GA +AL + F +
Sbjct: 84 PHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFS 143
Query: 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
I + + IGV GLITPWN+P+ ++ K+ P L AG T+V+KPSE+
Sbjct: 144 FQEALI----EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEI 199
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
+PL+A+ AE+ A P GV N++ G GA G +S H + + FTGST G I K+
Sbjct: 200 APLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKN 259
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
A+ LK+V LELGGK +IF D ++D A++ + F+N G++C + R+ V+ IYD
Sbjct: 260 ASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYD 317
Query: 550 AFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR--- 591
++ +K K DK+ D + EGA L+ GG
Sbjct: 318 KAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM 377
Query: 592 -LDR-------------------------P-------GDVDAVIKRANSTEYGLASGIFT 618
++R P D + AN TEYGL + I +
Sbjct: 378 GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQS 437
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
D +K ++ SG V +N + + FGG K SG ++
Sbjct: 438 QDRSKCRRIAAQVRSGMVEVNGHE-LPGGSYFGGVKFSGRAREG 480
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 519 bits (1338), Expect = e-179
Identities = 153/463 (33%), Positives = 224/463 (48%), Gaps = 62/463 (13%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
+ +INGE+V S ++E INPA E I V N DVD A AA+ + E+ S
Sbjct: 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL-EFRHTSV 66
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
++R L+ K+ E K+++ + + GA +L+ + H M ++ + D
Sbjct: 67 KERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEF 126
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
+E IGV GLITPWN+P S K+A AAG+ VV+KPSE +
Sbjct: 127 EERR--------GDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEET 178
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
P A+ LAE+ + G PKGV N++ G GA G +S+H K+R + FTGS TG KIM+ A
Sbjct: 179 PFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A+ + KKVSLELGGKSP ++ DD ++ +A + + G V N G+ C + R+ V + I DA
Sbjct: 239 AK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA 297
Query: 551 FLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR---- 591
FL ++ + ++ K D++ +Y K EGA L GG
Sbjct: 298 FLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEG 357
Query: 592 LDR-------------------------P-------GDVDAVIKRANSTEYGLASGIFTS 619
L++ P D+D I+ AN T+YGLA +
Sbjct: 358 LEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGK 417
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
D I++GTV IN PFGG+KQSG G++
Sbjct: 418 DKETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQSGLGREW 459
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 507 bits (1308), Expect = e-174
Identities = 131/499 (26%), Positives = 212/499 (42%), Gaps = 70/499 (14%)
Query: 252 QLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
L INGE V + ++ NPA + + SV AN D + A +A++AF+ W ++
Sbjct: 39 PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ-TWRNVNP 95
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+R +++ K A ++ + K E + ++G + A +ID +Y+A ++
Sbjct: 96 EERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNR 154
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
+RP P+GV I+PWN+ L ++ + GNTVV+KP+ +
Sbjct: 155 GKEI--LSRPGE-QNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTT 211
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
P+ A K E+ AG PKGVIN +PG+GA G+ + H K + FTGS G+++ + A
Sbjct: 212 PVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271
Query: 491 AE-----SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
A ++LK+V +E+GGK +V+ D +LD A + F G+ C + R +
Sbjct: 272 AVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK 331
Query: 546 NIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGK 590
++YD LEK V K + + +K++ Y E K EG RL+ GG+
Sbjct: 332 DVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE 390
Query: 591 RLDRPG---------------------------------DVDAVIKRANSTEYGLASGIF 617
G D D ++ AN+TEYGL +
Sbjct: 391 GDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVI 450
Query: 618 TSDINKAMYFVDKIDSGTVFIN--TYNKTDVAAPFGGFKQSGFG-KDLDINKAMYFVD-K 673
T + + G ++ N PFGGFK SG K + + K
Sbjct: 451 TRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAK 510
Query: 674 IDSGTVFINTYNKTDVAAP 692
TV +
Sbjct: 511 ----TVSEMYAENLYFQSH 525
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 499 bits (1287), Expect = e-171
Identities = 133/459 (28%), Positives = 221/459 (48%), Gaps = 53/459 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
+ I G++V INP ++S I + A+ DVD A AA+KA EW+
Sbjct: 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ-AEWAAT 69
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +R ++++ A+L+E+++EE+ +SG+ + A + ++ + K A + ++
Sbjct: 70 PAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRV 128
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G P R GV G+I+PWN+PL + +AP LA GN VV+KP+
Sbjct: 129 HGRISPSNTP---GKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPAS 185
Query: 429 VSPLTALKL-AELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
+P+T + A + AG P GVI+ + G G+ G+ H + + FTGST G ++
Sbjct: 186 DTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245
Query: 488 KSAAES-NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+ A +K V+LELGG +P V+ D ++D A + + G F ++G+ C+S R+ VD+
Sbjct: 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAA 305
Query: 547 IYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR 591
++D FLEK V VK + + + L L + E AK EGA + + G
Sbjct: 306 VHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI 365
Query: 592 ------------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDI 621
+ + D + AN++++GL++ +++ DI
Sbjct: 366 EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDI 425
Query: 622 NKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFG 659
++A F +IDSG V IN + FGG K SG G
Sbjct: 426 DRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG 464
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 495 bits (1276), Expect = e-169
Identities = 122/490 (24%), Positives = 211/490 (43%), Gaps = 66/490 (13%)
Query: 228 DVSNQLNHESIKLNVNKMDVSFPN--QLFINGEFVNSVGGSSMECINPAN-ESTICSVQM 284
+ +++ + ++ F L+I GE+V++ M +NP+ + +
Sbjct: 13 TFQTEEARRAMREALRRVREEFGRHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAK 70
Query: 285 ANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT 344
A + + A AA KAF+ W DR L+ K A LM + K EL + G +
Sbjct: 71 AGKAEAEAALEAAWKAFK-TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWV 129
Query: 345 LALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYP 404
A V +ID +Y+A + + + P + P+G +I PWN+P
Sbjct: 130 EA-SADVAEAIDFIEYYARAALRYRYPAVEVVP-YPGE-DNESFYVPLGAGVVIAPWNFP 186
Query: 405 LMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEA 464
+ + + + +A GNTV+ KP+E + + K+ E+ AGFP GV+N LPG G G
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAY 246
Query: 465 ISQHLKIRKVGFTGSTVTGMKIMKSAAE-----SNLKKVSLELGGKSPLVIFDDYNLDKA 519
+ +H +IR + FTGS G+KI ++A + K+ +E GGK+ +++ + + D A
Sbjct: 247 LVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLA 306
Query: 520 VRMSMGGVFFNKGENCISAG-RIFVDSNIYDAFLEKVVTEVKKMN--------------H 564
+ + +G+ C SA R+ + Y+ LE+V+ ++++
Sbjct: 307 AEGVVVSAYGFQGQKC-SAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVS 365
Query: 565 KAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------- 596
K++ Y E K+EG +L++GGKRL+ G
Sbjct: 366 AEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLS 424
Query: 597 -----DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN--TYNKTDVAAP 649
D ++ AN T YGL G+++ + + G ++ N P
Sbjct: 425 VIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQP 484
Query: 650 FGGFKQSGFG 659
FGGFK SG
Sbjct: 485 FGGFKLSGTN 494
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-164
Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 58/460 (12%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
++ GE+ S G +E +P + +TI V + ++V+ K +
Sbjct: 20 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGT 77
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ K AD++E+N + A + +++G + A V ++D + KI G
Sbjct: 78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGD 136
Query: 372 TIPIAHARPNSN-FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
IP +REP+GV ITP+NYPL K+ GN VV+KPS
Sbjct: 137 YIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISD 196
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PL A + + AGFP I +L G E I ++ V FTGST G +++K
Sbjct: 197 PLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVGERVVKVG 255
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
+K+ +ELGG P ++ +D +LD A G++ G+ C + + + +Y
Sbjct: 256 G---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 312
Query: 551 FLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR---- 591
+E+V + + + +D+++ E A +G R+L GG+R
Sbjct: 313 LVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT 372
Query: 592 ------LDRPGDV------------------------DAVIKRANSTEYGLASGIFTSDI 621
++ P D D I+ AN YGL + +F D+
Sbjct: 373 YVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGK 660
K V ++ G ++IN + + PFGG K+SG +
Sbjct: 433 VKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFR 472
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 480 bits (1238), Expect = e-164
Identities = 112/463 (24%), Positives = 196/463 (42%), Gaps = 58/463 (12%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
+ +I G+++ G ++E ++P + + S + A++ VD A AA +AF W+R
Sbjct: 4 MMSTHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP-AWARR 61
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
R L+ + A ++ +ELA + ++G + T V ++ +
Sbjct: 62 PLEQRIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRER 120
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G + +P GV + P+N+P + + + P L AGN VV KPSE
Sbjct: 121 TGEKSGPLADA----TAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSE 176
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
++P A + ++AG P GV+N++ G G TG A++ H + + FTGS+ TG +
Sbjct: 177 LTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHS 235
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
K ++LE+GG +PLV+ + +LD AV + F + G+ C A R+ V +
Sbjct: 236 QFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAW 295
Query: 549 -DAFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIGGKR 591
DA L ++V + + + L+ E +GA+ L+ +
Sbjct: 296 GDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ 355
Query: 592 LDRPG--------------------------------DVDAVIKRANSTEYGLASGIFTS 619
D A I+ AN+T+YGLA+G+ +
Sbjct: 356 PIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSD 415
Query: 620 DINKAMYFVDKIDSGTVFINT-YNKTDVAAPFGGFKQSGFGKD 661
+ F+ + +G V N +APFGG SG +
Sbjct: 416 SRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRP 458
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 480 bits (1237), Expect = e-164
Identities = 125/459 (27%), Positives = 207/459 (45%), Gaps = 52/459 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
F + NGE+V S G + PA+ + S+ + ++V+ A A+ A + W
Sbjct: 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK-IWKIR 68
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+R L++ ADL+E+ KE + + + A V + D ++ A ++
Sbjct: 69 PIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRL 127
Query: 369 LGSTIPIAHARPNSN--FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426
G T+ + S+ +REP+GV I+P+NYP+ + + K+AP L GNTVV KP
Sbjct: 128 NGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKP 187
Query: 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
+ L+ +K+ E AG P+G+I ++ G G+V G+ + +H I + FTG T TG +I
Sbjct: 188 ATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+ A + V LELGGK P ++ DD +L + G F G+ C + R+FV +
Sbjct: 248 SEKA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDS 304
Query: 547 IYDAFLEKVVTEVKKMN--------------HKAHLDKLIDYCEKAKSEGARLLIGGKR- 591
+ D + + V+++ + + + A GA LL G KR
Sbjct: 305 VADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQ 364
Query: 592 -----------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDIN 622
+ R D + I +N ++YGL + IFT D +
Sbjct: 365 GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTD 424
Query: 623 KAMYFVDKIDSGTVFINTYNKTDV-AAPFGGFKQSGFGK 660
+A+ ++ GTV IN + PF G K+SG G
Sbjct: 425 RAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGV 463
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 474 bits (1222), Expect = e-161
Identities = 154/456 (33%), Positives = 229/456 (50%), Gaps = 61/456 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+FI+G+++N M+ INP + I + + ++ A AEK E L
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE-VMKNLPITK 57
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R +++ +A +++ KEELA I ++D+G A + V SI T+K A + +
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEV 116
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
IP FT+REP+G+ G ITP+N+PL + + K+AP +A GN +V PS +PL
Sbjct: 117 IPSDDRL-----IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPL 171
Query: 433 TALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
++LA++ A P GV N+L G G V G+ I + K+ + FTGS+ G I K
Sbjct: 172 VCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK 231
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A KK++LELGG +P ++ D +L+KAV + G F G+ CIS G I VD +I
Sbjct: 232 KAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA 288
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR-- 591
D F+E V + K +N H + + EKA EG +LL+GGKR
Sbjct: 289 DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK 348
Query: 592 -------LDRPGDV-------------------DAVIKRANSTEYGLASGIFTSDINKAM 625
L+ D + +I ANSTEYGL S IFT+DINK++
Sbjct: 349 ALFYPTILEVDRDNILCKTETFAPVIPIIRTNEEEMIDIANSTEYGLHSAIFTNDINKSL 408
Query: 626 YFVDKIDSGTVFINTYNKTDV-AAPFGGFKQSGFGK 660
F + ++ G V IN + PFGG K+SG G+
Sbjct: 409 KFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGR 444
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 449 bits (1157), Expect = e-151
Identities = 67/498 (13%), Positives = 149/498 (29%), Gaps = 93/498 (18%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ + G+++ G + +P + V D + A E L+
Sbjct: 9 KNHVAGQWIAGTGAG-ITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG-AALRALTYA 66
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
R + + L++ + + I + +SG + + I T Y+A +
Sbjct: 67 QRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEV 125
Query: 372 TIPIAHARP------NSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425
+ + + GV I +N+P L K AP L +G V++K
Sbjct: 126 HALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVK 185
Query: 426 PSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
P+ + ++ V AG P G ++I+ G+ + Q V FTGS T
Sbjct: 186 PATATAWLTQRMVADVVDAGILPPGALSIICGSS---AGLLDQIRSFDVVSFTGSADTAA 242
Query: 485 KIMKSAAES-NLKKVSLELGGKSPLVIFDD-----YNLDKAVRMSMGGVFFNKGENCISA 538
+ A +++++ + ++ D D ++ + + G+ C +
Sbjct: 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAI 302
Query: 539 GRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGA 583
R FV + LE + ++ K+ + + ++ + E
Sbjct: 303 RRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAV 362
Query: 584 RLLIGGKRLDRPGDVDA------------------------------------------- 600
D +
Sbjct: 363 LAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422
Query: 601 -----VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-------- 647
+ A + L + I+++D ++ ++ + +
Sbjct: 423 LPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
Query: 648 ---APFGGFKQSGFGKDL 662
+ GG ++G G++L
Sbjct: 483 MPMSLHGGPGRAGGGEEL 500
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-149
Identities = 136/464 (29%), Positives = 225/464 (48%), Gaps = 55/464 (11%)
Query: 245 MDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE 304
M V + ++I+G+FV G + ++ +NPA E+ I + ++D A AAE+A E
Sbjct: 1 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP-E 59
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W L A +R + K++ + + E++ + + G + LA + V + D Y A W
Sbjct: 60 WEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEW 118
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
+ G I RP N + +GV I PWN+P +++ KMAP L GNT+V+
Sbjct: 119 ARRYEGEIIQ--SDRPGENI-LLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVI 175
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KPSE +P A+ A++ G P+GV N++ G G G+ ++ + K+ V TGS G
Sbjct: 176 KPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGE 235
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
KIM +AA+ N+ KV LELGGK+P ++ DD +L+ AV+ + N G+ C A R++V
Sbjct: 236 KIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQ 294
Query: 545 SNIYDAFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIG 588
IYD F+ ++ ++ + + A L+++ +A EGAR+ G
Sbjct: 295 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFG 354
Query: 589 GKRLDRPG---------------------------------DVDAVIKRANSTEYGLASG 615
GK ++ G ++ I AN ++YGL S
Sbjct: 355 GKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSS 414
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
I+T ++N AM + + G +IN N + G+++SG G
Sbjct: 415 IYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIG 458
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 441 bits (1138), Expect = e-149
Identities = 123/456 (26%), Positives = 208/456 (45%), Gaps = 54/456 (11%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ ++NGE+ S + ++ PA+ + + SV ++++VD +A+KA W LS
Sbjct: 6 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-AWRALSYI 62
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R + K+AD++ ++KE++ I S + Y A + V + + Y A ++ G
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGE 121
Query: 372 TIPIAHARPNSN--FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
+ S +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 181
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
++ L LAE AG P GV N + G G+ G+ I +H + + FTGST G +I K
Sbjct: 182 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
A ++ + LELGGK ++ +D +L+ + + G F G+ C + R+ V ++ D
Sbjct: 242 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 298
Query: 550 AFLEKVVTEVKKMN--------------HKAHLDKLIDYCEKAKSEGARLLIGGKR---- 591
+EK+ +V + D + A +GA L KR
Sbjct: 299 ELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL 358
Query: 592 --------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAM 625
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 359 ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAF 418
Query: 626 YFVDKIDSGTVFINTYNKTDV-AAPFGGFKQSGFGK 660
++++ GTV IN + PF G K+SG G
Sbjct: 419 GIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGI 454
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 410 bits (1057), Expect = e-137
Identities = 123/463 (26%), Positives = 219/463 (47%), Gaps = 54/463 (11%)
Query: 245 MDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE 304
M N+ FING++ G + + +NP ++S I + +A ++ A A+KA + E
Sbjct: 1 MSFETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK-E 59
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W++ + DR ++ K + +N++++ + + ++G + + +I +
Sbjct: 60 WAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTY 118
Query: 365 CDKILGS-TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
++ G +P + R P+GV I+P+N+P+ + +AP +A GN+VV
Sbjct: 119 TGELGGVKEVP---SDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVV 175
Query: 424 MKPSEVSPLTALKL-AELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVT 482
KP + ++ + A+ AG P GV+N++ G+ + + R + FTGST
Sbjct: 176 HKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAV 235
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIF 542
G I + A K+++LELGG +P + D ++D+AV ++ G F ++G+ C+ RI
Sbjct: 236 GRHIGEIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRII 294
Query: 543 VDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLI 587
V ++YD F+EK VK++ ++ ++K ++ E+AK++G L +
Sbjct: 295 VHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAV 354
Query: 588 GGKRLD------------------------------RPGDVDAVIKRANSTEYGLASGIF 617
GKR+ + G I AN TEYGL+S +F
Sbjct: 355 EGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVF 414
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFG 659
TSD+ K F +IDSG +N + D FGG K SG G
Sbjct: 415 TSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG 457
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 393 bits (1013), Expect = e-130
Identities = 124/463 (26%), Positives = 213/463 (46%), Gaps = 58/463 (12%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
FI G++V S +++ ++P+ I + D + A A+ A + W++L
Sbjct: 11 KNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK-AWAKL 69
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+AR R +++ A+ + +NK LA + + G + ++A + V ++ Y I
Sbjct: 70 TARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTI 128
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G +P + + + P GV IT WN+PL + K+ P L GNT+V+KP++
Sbjct: 129 EGDILP--SDNQDEKI-YIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQ 185
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PL +L ++ AG P GV+N++ GTG+V G+ + + + + TGSTV G +I K
Sbjct: 186 ETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
++A + V LELGGK+P+V+ DD +LDKA ++ G F N G+ C R++V +++Y
Sbjct: 246 TSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVY 304
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ K + VK + ++ +D + +A +GA + GGK
Sbjct: 305 DEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTAT 364
Query: 594 RPG-------------DVDA------------------------VIKRANSTEYGLASGI 616
G DV I+ N + YGL++ +
Sbjct: 365 VEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYV 424
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
T + ++ G V+IN G+KQSGFG
Sbjct: 425 HTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFG 467
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 391 bits (1007), Expect = e-129
Identities = 104/472 (22%), Positives = 199/472 (42%), Gaps = 64/472 (13%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
++ + N+ NG + G + PAN I V+ A+ D + A +A++
Sbjct: 16 KELGLREENEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK 73
Query: 303 GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFA 362
W+ + A RG ++ ++ D + + + L ++ SL+ G + V +D Y
Sbjct: 74 -IWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAV 131
Query: 363 GWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422
G I G +P R + + P+G+ G+IT +N+P+ + W A + GN
Sbjct: 132 GLSRMIGGPILP--SERSG-HALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVC 188
Query: 423 VMKPSEVSPLTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTG 478
+ K + + L ++ + ++ + P + ++ G GA G A+++ ++ + FTG
Sbjct: 189 LWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTG 247
Query: 479 STVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISA 538
ST G ++ E + LELGG + ++ F+D +L V ++ G+ C +A
Sbjct: 248 STQVGKQVGLMVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTA 306
Query: 539 GRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGA 583
R+F+ +I+D + ++ ++ K + + E+AK EG
Sbjct: 307 RRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGG 366
Query: 584 RLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEY 610
++ GGK +DRPG + + V N +
Sbjct: 367 TVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQ 426
Query: 611 GLASGIFTSDINKAMYFV--DKIDSGTVFINTY-NKTDVAAPFGGFKQSGFG 659
GL+S IFT D+ + ++ D G V +N + ++ FGG K +G G
Sbjct: 427 GLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG 478
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 389 bits (1003), Expect = e-129
Identities = 153/459 (33%), Positives = 244/459 (53%), Gaps = 54/459 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
F Q INGE++++ G +++ NPAN + SV +D+ A AA +A W L
Sbjct: 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP-AWRAL 66
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A++R ++ +LM +++++LA + +L+ G A K + + ++FA +I
Sbjct: 67 TAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRI 125
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP H ++PIGV ITPWN+P M++ K P LAAG T+V+KP+
Sbjct: 126 YGDTIP-GHQADKRLIVI--KQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPAS 182
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+P +AL LAEL++RAG P GV N++ G+ G ++ + +RK+ FTGST G ++M+
Sbjct: 183 QTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME 242
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A ++KKVSLELGG +P ++FDD +LDKAV ++ F N G+ C+ A R++V +Y
Sbjct: 243 QCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY 301
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F EK+ + K++ + + K+ ++ A +GAR++ GGK +
Sbjct: 302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHE 361
Query: 594 RPG---------DVDA------------------------VIKRANSTEYGLASGIFTSD 620
R G DV A VI +AN TE+GLA+ + D
Sbjct: 362 RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 421
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
+++ + ++ G V INT ++ APFGG K SG G
Sbjct: 422 LSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLG 460
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 389 bits (1002), Expect = e-129
Identities = 141/459 (30%), Positives = 233/459 (50%), Gaps = 54/459 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
+Q +I GE+ + ++ E +PA ++ +V + + A AA+ A+ W
Sbjct: 11 LRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA-GWRMK 69
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A++R ++ + DL+ N ++LA I + + G A K + + ++FA ++
Sbjct: 70 TAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRV 128
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G T+P N +EPIGVC ITPWN+P M++ K+ P LAAG +V+KP+E
Sbjct: 129 AGDTLP--TPDANKRI-VVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAE 185
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+P +AL +A L+ RAG PKGV++++ G G I+ + +RK+ FTGST G +M
Sbjct: 186 STPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMA 245
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +KK++LELGG +P ++FDD +LD AV ++ + N G+ C+ R FV +Y
Sbjct: 246 QSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVY 304
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
DAF +K+ V K+ ++A + K+ + A ++GA L+ GGKR
Sbjct: 305 DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA 364
Query: 594 RPG---------DVDA------------------------VIKRANSTEYGLASGIFTSD 620
V +++ AN TE+GLA+ +++ D
Sbjct: 365 LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD 424
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
I + + ++ G V INT ++ APFGG KQSG G
Sbjct: 425 IGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLG 463
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 388 bits (998), Expect = e-128
Identities = 129/460 (28%), Positives = 207/460 (45%), Gaps = 55/460 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
+I G + +S GG++ + NPA S I V +DV A A + A +
Sbjct: 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR-LTNPW 68
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
R + + D +++N+EE+ I ++ G + A + V + + Y A +
Sbjct: 69 PIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEA-QGEVDYAAGFFDYCAKHISAL 127
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
TIP + + P+GV GLI PWN+P+ M++ K++ LAAG V+KP+
Sbjct: 128 DSHTIP--EKPKDCTW-TVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPAS 184
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLT + + + P G++N++ G +V G+ + +H + + FTGST G K++
Sbjct: 185 ETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A +KK++LELGG +P ++FDD +L+ A + F G+ C+ A RIFV +
Sbjct: 245 DTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVA 303
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
DAF +K+ V KM +K DK+ + + A +GA L+ G + +
Sbjct: 304 DAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE 363
Query: 594 RPG----------------------------------DVDAVIKRANSTEYGLASGIFTS 619
+ VI N TE+GLAS +FT+
Sbjct: 364 LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTA 423
Query: 620 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
D +A + G V NT APFGG K SG G
Sbjct: 424 DAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIG 463
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 387 bits (997), Expect = e-128
Identities = 144/457 (31%), Positives = 239/457 (52%), Gaps = 52/457 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
+Q +NG ++++ G++++ NPA+ S I +V + + A A+ KA W+
Sbjct: 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS-GWAAK 89
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A++R ++ K DL+ N +++A I + + G A + V + ++FA ++
Sbjct: 90 TAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRV 148
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP + R+P+GV ITPWN+P M++ K AP LAAG T++++P++
Sbjct: 149 YGDTIP--APQNGQRL-TVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPAD 205
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
++PLTAL L L+ +AG P GV+ I+ G G ++ + +RK+ FTGST G +M
Sbjct: 206 LTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMA 265
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A +K++SLELGG +P ++FDD +LD AV +M + N G+ C+ A RI+V +Y
Sbjct: 266 QCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVY 324
Query: 549 DAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F EK+ +VK++ + + K+ + E A S+GA+L+ GGK L
Sbjct: 325 DKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG 384
Query: 594 ----RP---GDVDA------------------------VIKRANSTEYGLASGIFTSDIN 622
P V + VI +AN T +GLA+ +T + +
Sbjct: 385 GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFS 444
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
+A+ + ++ G V NT ++ APFGG KQSG G
Sbjct: 445 RAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLG 481
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 379 bits (977), Expect = e-125
Identities = 139/464 (29%), Positives = 225/464 (48%), Gaps = 62/464 (13%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
F+ G ++ + ++ +PA+ + + V + A AA +AF W +
Sbjct: 11 LRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC-RWREV 67
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
SA++R L+ K +LM QNK++LA I + +SG A + S ++F+ ++
Sbjct: 68 SAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEEARRV 126
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G I + ++PIGV +ITPWN+P M++ K+ LAAG TVV+KP+E
Sbjct: 127 YGDIIH--TPAKDRRA-LVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAE 183
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVT---GEAISQHLKIRKVGFTGSTVTGMK 485
+P +AL LAEL+ +AG P GV N++P + GEAI + K+ FTGST TG
Sbjct: 184 DTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKI 243
Query: 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
++ AA +++K+VS+ELGG +P ++FD N+D+AV +M F N G+ C+ + + V
Sbjct: 244 LLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQR 302
Query: 546 NIYDAFLEKVVTEVKK-----------------MNHKAHLDKLIDYCEKAKSEGARLLIG 588
I+DAF++ +KK +N KA ++K+ A S+GA ++ G
Sbjct: 303 GIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKA-VEKVEKQVNDAVSKGATVVTG 361
Query: 589 GKRLDRPG---------------------------------DVDAVIKRANSTEYGLASG 615
GKR + I AN+ + GLA
Sbjct: 362 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 421
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
++ D + ++++ G V +N + V PFGG KQSG G
Sbjct: 422 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLG 465
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 376 bits (968), Expect = e-123
Identities = 77/463 (16%), Positives = 155/463 (33%), Gaps = 73/463 (15%)
Query: 260 VNSVGGSSMECINPANESTI-CSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMF 318
+N + N + + + +V+ AA AA K + RL+ R L+
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD-FRRLNNSKRASLLR 59
Query: 319 KLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHA 378
+A +E +++ L++ + + + + FA + +
Sbjct: 60 TIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTP 118
Query: 379 RPNSN-----FTFTKREPIGVCGLITPWNYPLMM--LSWKMAPCLAAGNTVVMKPSEVSP 431
P ++ +G + N+PL A LAAG V++K P
Sbjct: 119 NPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHP 178
Query: 432 LTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487
T+ +AE +A P+ + +L G G+A+ H +I+ VGFTGS G +
Sbjct: 179 GTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALF 238
Query: 488 KSAAESNLKKVS--LELGGKSPLVIFDDYNLDKA--VRMSMGGVFFNKGENCISAGRIFV 543
A E + + ELG +P IF KA + + G+ C G +F
Sbjct: 239 NLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 544 -DSNIYDAFLEKVVTEVKKMN---------HKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
++ AF+E + +++ + ++ +++ + +G +
Sbjct: 298 LNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVV---SRGSDDGIDVTFSQAESP 354
Query: 594 RPG--------------------------------DVDAVIKRANSTEYGLASGIFTS-- 619
+V ++ + L + I +
Sbjct: 355 CVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEE 414
Query: 620 DINKAMYFVDKIDS--GTVFINTYNKTDV----AAPFGGFKQS 656
D + + +++ G + N + T V A GG +
Sbjct: 415 DYPQVSQLIPRLEEIAGRLVFNGWP-TGVEVGYAMVHGGPYPA 456
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 360 bits (926), Expect = e-118
Identities = 115/441 (26%), Positives = 189/441 (42%), Gaps = 58/441 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
+NPA T+ ++ AN+ +++ A A F+ +W S R + + + + EE
Sbjct: 12 VNPATGQTLAAMPWANAQEIEHALSLAASGFK-KWKMTSVAQRAQTLRDIGQALRAHAEE 70
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST-IPIAHARPNSNFTFTKR 389
+A + + G A + V S ++A +L + + + +
Sbjct: 71 MAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQ-----AVIEY 124
Query: 390 EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449
P+GV I PWN+PL + P L AGN+ ++K + A +A + AG P G
Sbjct: 125 RPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAG 184
Query: 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLV 509
V + + I+ +I V TGS G I A LKK LELGG P +
Sbjct: 185 VYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFI 242
Query: 510 IFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-------- 561
+ +D +L+ AV+ ++ G + N G+ C +A R V+ I AF ++ V
Sbjct: 243 VLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLV 302
Query: 562 -------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------ 596
M D+L + + +EGARLL+GG+++ G
Sbjct: 303 EENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAF 362
Query: 597 ---------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641
D + AN +E+GL++ IFT+D A +++ G VFIN Y
Sbjct: 363 RQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGY 422
Query: 642 NKTDVAAPFGGFKQSGFGKDL 662
+ +D FGG K+SGFG++L
Sbjct: 423 SASDARVAFGGVKKSGFGREL 443
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 360 bits (927), Expect = e-117
Identities = 106/440 (24%), Positives = 189/440 (42%), Gaps = 56/440 (12%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
+NP S S +D A A ++ +W R ++ +A+ ++++++E
Sbjct: 9 VNPYTNEAFASYDNPTSKQIDEAINLAHALYK-KWRHEEPASRAEILHDIANALKEHEDE 67
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
LA + +L+ G + + + K V + + Y+A ++L T + + ++
Sbjct: 68 LAKMMTLEMGKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSDLGN----AYYLKQ 122
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
GV PWN+PL + AP GN +++K + P +A A++ RAG P+G
Sbjct: 123 STGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGS 182
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+ L + + I+ +I+ V TGS G + ++A + NLKK ++ELGG ++
Sbjct: 183 LINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIV 240
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK--------- 561
DD + + +N G+ C S+ RI V+ + YD L ++
Sbjct: 241 LDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEA 300
Query: 562 ------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------- 596
MN + +KL ++A GA++ +D G
Sbjct: 301 DTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFD 360
Query: 597 --------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYN 642
D +A I+ AN + YGL S + SDI++A +I++G IN
Sbjct: 361 KEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRW 420
Query: 643 KTDVAAPFGGFKQSGFGKDL 662
T PFGG K+SG+G++L
Sbjct: 421 ITSGELPFGGIKKSGYGREL 440
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-116
Identities = 128/491 (26%), Positives = 203/491 (41%), Gaps = 68/491 (13%)
Query: 228 DVSNQLNHESIKLNVNKMDVSFPN--QLFINGEFVNSVGGSSMECINPAN-ESTICSVQM 284
D + + + ++ ++ LFING+ V + + +NP + +
Sbjct: 507 DFTRADHRAAFPKHIAQVRTQLGKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQ 564
Query: 285 ANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT 344
A + +V A AA+ AF W R R + K A + EL+ + L+ G +
Sbjct: 565 AGTTEVGDAIAAAKAAFP-AWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWD 623
Query: 345 LALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYP 404
A V +ID +Y+A ++ EP GV +I PWN+P
Sbjct: 624 QAY-ADVTEAIDFLEYYAREMIRLGQPQRV---GHAPGELNHYFYEPKGVAAVIAPWNFP 679
Query: 405 LMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEA 464
L + + + GN VV KPS ++ + L EL AG P+GV N PG G+V G+
Sbjct: 680 LAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDY 739
Query: 465 ISQHLKIRKVGFTGSTVTGMKIMKSAAE-----SNLKKVSLELGGKSPLVIFDDYNLDKA 519
+ H I + FTGS TG++I++ AA+ +N+KK+ E+GGK+ ++I DD +LD+A
Sbjct: 740 LVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEA 799
Query: 520 VRMSMGGVFFNKGENCISAG-RIFVDSNIYDAFLEKVVTEVKKMN--------------- 563
V + F +G+ C SA R+ V +YD F+E++V+ K
Sbjct: 800 VPHVLYSAFGFQGQKC-SACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVA 858
Query: 564 HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------- 596
+ + +Y E K EG +L G
Sbjct: 859 DDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVL 917
Query: 597 ------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN--TYNKTDVAA 648
D D I+ ANST++ L GIF+ + G ++IN
Sbjct: 918 AVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQ 977
Query: 649 PFGGFKQSGFG 659
PFGG + SG G
Sbjct: 978 PFGGARMSGVG 988
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 321 bits (825), Expect = e-102
Identities = 97/474 (20%), Positives = 165/474 (34%), Gaps = 75/474 (15%)
Query: 252 QLFINGEFVNSVG-GSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
+ + GE+++ G +S PA++ + +V + V+ A AAE+AF + S
Sbjct: 31 KHLVAGEWLDGAGTFASAPAHGPAHDFAVGTV-----ELVNRACEAAEEAFW-TYGYSSR 84
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLA-LKTHVGMSIDTWKYFAG------ 363
++R + +AD +E E + I S ++G A L G + + FA
Sbjct: 85 KERAAFLRAIADEIEARAEAITEIGSQETGL--PEARLNGERGRTTGQLRLFADHIEKGD 142
Query: 364 WCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM--LSWKMAPCLAAGNT 421
+ D+ + + +P P + P+G + N+PL A LAAG
Sbjct: 143 YLDRRVDAAMPERQPAPRQEIRLV-QRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201
Query: 422 VVMKPSEVSPLTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFT 477
VV+K P T +AE A G GV +++ G G A+ QH I+ VGFT
Sbjct: 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261
Query: 478 GSTVTGMKIMKSAAES-NLKKVSLELGGKSPLVIFDDYNLDKA---VRMSMGGVFFNKGE 533
GS G + A ELG +P+ + + +A + G + G+
Sbjct: 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQ 321
Query: 534 NCISAGRIFV-DSNIYDAFLEKVVTEVKKMNHKAHLDKLID--YCEK----AKSEGARLL 586
C + G V + D F V + K+ + L I Y + A + L
Sbjct: 322 FCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPL 381
Query: 587 IGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLA 613
+ + R + + A + L
Sbjct: 382 LATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLT 441
Query: 614 SGIFT--SDINKAMYFVD--KIDSGTVFINTY----NKTDVAAPFGGFKQSGFG 659
+ I D+ A + +G V +N + D G + S
Sbjct: 442 ATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 302 bits (774), Expect = 4e-90
Identities = 104/480 (21%), Positives = 178/480 (37%), Gaps = 64/480 (13%)
Query: 233 LNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDI 292
H I L + N + F + A + + A D
Sbjct: 497 AAHPRIPLPCDLFAPERRNSRGVE--FGARTALDQLLTDVKAETGDLKPIADATPDQAHA 554
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVG 352
A AA F WSR A R + + A L+E + + G AL + +
Sbjct: 555 AVAAARAGFA-GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELR 612
Query: 353 MSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412
+ D +Y+A K+ GS + P GV I+PWN+PL + ++
Sbjct: 613 EAADFCRYYAAQGRKLFGSETAMP--GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQV 670
Query: 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIR 472
L AGN+VV KP+E +P A + L AG PK + ++ G G + G A++ H I
Sbjct: 671 TAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIA 729
Query: 473 KVGFTGSTVTGMKIMKSAAESN--LKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFN 530
V FTGST I ++ A + + + E GG + ++ ++ + F +
Sbjct: 730 GVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRS 789
Query: 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYC 575
G+ C + +FV ++ D +E V +++ +L +
Sbjct: 790 AGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI 849
Query: 576 EKAKSEGARLLIGGKRLD-------------------------------RPGDVDAVIKR 604
+ K+E RL G + RP +++ V++
Sbjct: 850 ARMKTEA-RLHFAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRA 908
Query: 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA-----PFGGFKQSGFG 659
T YGL G+ + + +D++ G +++ N+ + A PFGG SG G
Sbjct: 909 IERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYV---NRNMIGAVVGVQPFGGNGLSGTG 965
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 276 bits (709), Expect = 7e-86
Identities = 79/425 (18%), Positives = 141/425 (33%), Gaps = 74/425 (17%)
Query: 282 VQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSG- 340
+ + N ++D +KA E E++ S + + Q + LA +SG
Sbjct: 1 MPVTNMAELDAMIARVKKAQE-EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGM 59
Query: 341 -AVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLIT 399
V +K H + Y ++ G + ++ T T EP+G+ I
Sbjct: 60 GIVEDKVIKNHF---ASEFIYNKYKDEQTCG-ILE----EDDNLGTMTIAEPVGIICGIV 111
Query: 400 PWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL----SVRAGFPKGVINILP 455
P P +K L N ++ P + + A+L +V AG PK +I +
Sbjct: 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWID 171
Query: 456 GTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYN 515
A+ +H I + TG AA S+ K G P+VI + +
Sbjct: 172 QPSVELSNALMKHDDIALILATGGPGMV-----KAAYSSGKPAIGVGAGNVPVVIDETAD 226
Query: 516 LDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------------- 562
+ +AV + F+ G C S + V +YD E+ + +
Sbjct: 227 IKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVL 286
Query: 563 -NHKAHLDKLIDYCEKAKSEGARLLIGGK------------RLDRP-------------- 595
A K++ A +E A + + D
Sbjct: 287 LIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFR 346
Query: 596 -GDVDAVIKRA----NSTEYGLASGIFTSD---INKAMYFVDKIDSGTVFINTYNKTDVA 647
+ + + +A G SG++T+ ++ YF DK+ + + IN
Sbjct: 347 ADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINI------P 400
Query: 648 APFGG 652
GG
Sbjct: 401 TTHGG 405
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 2e-78
Identities = 137/470 (29%), Positives = 218/470 (46%), Gaps = 70/470 (14%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ +INGE+V S + +NPA + +C V ++ +D+D AA A +AF+ WS+++
Sbjct: 7 KNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK-TWSKVAVP 65
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
R ++F L+ Q+KEELA + ++++G A VG I+ ++ AG ++G
Sbjct: 66 RRARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGD 124
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
++ R PIGV G I P+N+P+M+ W +A GNT ++KPSE +P
Sbjct: 125 SLASIATDVE---AANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTP 181
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
L KL EL +AG PKGV N++ G I +H +I+ + F GS G + K +
Sbjct: 182 LLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENC--ISAGRIFVDSNIYD 549
E NLK+V G K+ ++ +D NL+ V +G F + GE C + + I D
Sbjct: 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEG--IAD 297
Query: 550 AFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLL-------- 586
F+ K+ +V + + + + + Y EK EGARL+
Sbjct: 298 EFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVS 357
Query: 587 -----IGGKRLD---------------------RPGDVDAVIKRANSTEYGLASGIFTSD 620
+G D R ++ I+ AN +E+ + +FTS+
Sbjct: 358 DDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSN 417
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAP-----FGGFKQSGFGKDLDIN 665
N YF + ID+G + IN V AP F G+K S FG L N
Sbjct: 418 SNAIRYFRENIDAGMLGIN----LGVPAPMAFFPFSGWKSSFFG-TLHAN 462
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 5e-78
Identities = 116/473 (24%), Positives = 195/473 (41%), Gaps = 72/473 (15%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
FI+G+ V G NPA +V +A+ D+ A +A+ A +W+ + +
Sbjct: 28 GHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP-KWAATNPQ 86
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
R + K L+ N ELA + S + G A K + ++ ++ G
Sbjct: 87 RRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSE 145
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
A + ++ R+P+G+ ITP+N+P M+ W AP +A GN ++KPSE P
Sbjct: 146 FTEGAGPGID---MYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDP 202
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
++LAEL + AG P G++N++ G +AI H I V F GST + +AA
Sbjct: 203 SVPIRLAELMIEAGLPAGILNVVNGDKGAV-DAILTHPDIAAVSFVGSTPIARYVYGTAA 261
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENC--ISAGRIFVDSNIYD 549
N K+ G K+ ++I D +LD+A +G + + GE C IS + V +
Sbjct: 262 M-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVA-VPVGEETAN 319
Query: 550 AFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDR 594
++K+V V+ + K ++ + +GA+L++ G+
Sbjct: 320 RLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL 379
Query: 595 PG-------------------------------------DVDAVIKRANSTEYGLASGIF 617
G + + + EYG I+
Sbjct: 380 QGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIY 439
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAP-----FGGFKQSGFGKDLDIN 665
T D + A F +I+ G V +N + P FGG+K S FG DL+ +
Sbjct: 440 TRDGDAARDFASRINIGMVGVN----VPIPVPLAYHSFGGWKSSSFG-DLNQH 487
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 7e-78
Identities = 67/421 (15%), Positives = 129/421 (30%), Gaps = 71/421 (16%)
Query: 283 QMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSG-- 340
+ + +V +A KA + E + +S + ++ +AD +E+LA + ++G
Sbjct: 7 DLRSIQEVRNLIESANKAQK-ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFG 65
Query: 341 AVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITP 400
+K K+ + + + N P+GV + P
Sbjct: 66 IWQDKVIKNVFAS-----KHVYNYIKDMKTIGML---KEDNEKKVMEVAVPLGVVAGLIP 117
Query: 401 WNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL----SVRAGFPKGVINILPG 456
P + +K + AGN++V P + L+ + + +AG PKG I+ +
Sbjct: 118 STNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTV 177
Query: 457 TGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNL 516
+ + +H + TG + AA S+ G P I N+
Sbjct: 178 PTIQGTDQLMKHKDTAVILATGGSAMV-----KAAYSSGTPAIGVGPGNGPAFIERSANI 232
Query: 517 DKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVK---------------- 560
+AV+ + F+ G C S + V+ +A + + +
Sbjct: 233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFIL 292
Query: 561 ----KMNHK---AHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------------- 596
MN + + + AR+LI +
Sbjct: 293 RPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTA 352
Query: 597 -DVDAVIKRANSTEY----GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFG 651
+ + Y G I + D F K + +NT G
Sbjct: 353 ETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNT------PGALG 406
Query: 652 G 652
G
Sbjct: 407 G 407
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 217 bits (555), Expect = 2e-62
Identities = 89/473 (18%), Positives = 170/473 (35%), Gaps = 79/473 (16%)
Query: 253 LFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ E V + ++P N + A+ ++ A AA A + EW
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK-EWDLKPMA 122
Query: 312 DRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
DR + K AD++ + E+ + G A ID +++ A + ++ G
Sbjct: 123 DRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEG 182
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
PI+ ++ + R G I+P+N+ + + AP GN V+ KPS+ +
Sbjct: 183 EQ-PISVPPSTNHTVY--RGLEGFVAAISPFNFTAIGGNLAGAP-ALMGNVVLWKPSDTA 238
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
L + + + AG P +I +P G G+ ++ + + FTGS T + +
Sbjct: 239 MLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQV 298
Query: 491 AES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
A++ +++ E GGK+ + ++D V ++ F G+ C + R++V
Sbjct: 299 AQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPK 358
Query: 546 NIYDAFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEG-ARLLIG 588
+++ +++ E ++ ++ + E A+S +L G
Sbjct: 359 SLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAG 418
Query: 589 GKRLDRPG-----------------------------------DVDAVIKRANS-TEYGL 612
G+ + G +K +S T YGL
Sbjct: 419 GQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGL 478
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFI--NTY-NKTDVAA-----PFGGFKQSG 657
+F D V + N Y N + PFGG + SG
Sbjct: 479 TGAVFAQD----KAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 2e-48
Identities = 87/330 (26%), Positives = 136/330 (41%), Gaps = 69/330 (20%)
Query: 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA 444
+ EP+GV +I WNYP + M +AAGN VV+KPSE+S A LA + +
Sbjct: 114 LYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATI-IPQ 172
Query: 445 GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504
K + ++ G G + + + + +TGST G IM +AA+ +L V+LELGG
Sbjct: 173 YLDKDLYPVING-GVPETTELLK-ERFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGG 229
Query: 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-- 562
KSP + + +LD A R G F N G+ C++ I D +I + +EK+ +K+
Sbjct: 230 KSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYG 289
Query: 563 -------------NHKAHLDKLIDYCEKAKSEGARLLIGGKR----------------LD 593
+ + H +++ EG ++ GG
Sbjct: 290 EDAKKSRDYGRIISAR-HFQRVMGLI-----EGQKVAYGGTGDAATRYIAPTILTDVDPQ 343
Query: 594 RP----------------GDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637
P ++ I+ N E LA +F+S+ + + SG V
Sbjct: 344 SPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403
Query: 638 INTYNKTDV-------AAPFGGFKQSGFGK 660
N DV + PFGG SG G
Sbjct: 404 AN-----DVIVHITLHSLPFGGVGNSGMGS 428
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 5e-45
Identities = 85/336 (25%), Positives = 153/336 (45%), Gaps = 41/336 (12%)
Query: 386 FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG 445
+ +EP GV +I P+NYP+ + + + GNT ++KPSE +P T+ + ++ +
Sbjct: 125 YVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKI-IAEA 183
Query: 446 FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505
F + ++ G G + L + FTGS G +M++AA+ +L V LELGGK
Sbjct: 184 FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGK 240
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN-- 563
PL++ D +LD+ V M G F N G+ I+ ++V ++ DA LE++V VK
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPE 300
Query: 564 --------HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVD-AVIKRANSTEYGLAS 614
+ + +L+ E + ++L+G + + V+ + ++
Sbjct: 301 INSTGKLVTERQVQRLVSLLEATQ---GQVLVGSQADVSKRALSATVVDGVEWNDPLMSE 357
Query: 615 GIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKI 674
+F + + D + + +N ++ +A FGKD+D+ K +++I
Sbjct: 358 ELFGPIL--PVLEFDSVRTAIDQVNKHHPKPLAVYV-------FGKDMDVAK--GIINQI 406
Query: 675 DSGTVFINTYNKTDV-------AAPFGGFKQSGFGK 703
SG +N V PFGG SG G+
Sbjct: 407 QSGDAQVN-----GVMLHAFSPYLPFGGIGASGMGE 437
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110 | Back alignment and structure |
|---|
Score = 94.7 bits (235), Expect = 2e-23
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 133 ACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVVRL 190
+ F K S+ L LTE+E ++++W IL EV + TDFF+SGA S+DVVRL
Sbjct: 5 SSGFFKGAASSV-LELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRL 63
Query: 191 IEEIKENL-QITLQNEDVLMSSVFRDFYIKVIEVSRQGD 228
+EE+KE + L+NEDV M+S F DF ++ R D
Sbjct: 64 VEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDD 102
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A Length = 329 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTPA 71
I ++ E IHN+IRG D PGA T ++ F S++ + EG + + G+ P
Sbjct: 233 INWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPG 292
Query: 72 ILHPDGLLFTGSDGQKVR 89
++ GL+ G+D + +
Sbjct: 293 VVTKAGLILFGNDDKMLL 310
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 8e-11
Identities = 99/659 (15%), Positives = 180/659 (27%), Gaps = 223/659 (33%)
Query: 128 NKMIHACN-----FGKEKDSAKDLVLTESEEAIIPVLKT-------------------IW 163
+ + F E + + ++ +L W
Sbjct: 12 GEHQYQYKDILSVF--EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 164 AGILNSEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIEV 223
L S+ E F ++ L+ IK + + + RD +V
Sbjct: 70 --TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ--RDRLYNDNQV 125
Query: 224 SRQGDVSNQLNHESIKLNVNKMDVSFPNQ-LFINGEFVNSVGGSSMECINPANESTICSV 282
+ +VS + ++ + ++ P + + I+G V GS + A +
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELR---PAKNVLIDG-----VLGSGKTWV--ALDV----- 170
Query: 283 QMANSDDVDIAALAAEKAFEGE--WSRLSARDRGH-LMFKLADL---MEQNKEELA---- 332
S V + + + W L + ++ L L ++ N +
Sbjct: 171 --CLSYKV-------QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221
Query: 333 ----TIESLDSGAVYTLALKTHVGM--------SIDTWKYFAGWCDKILGST-------- 372
I S+ + L K + + W F C KIL +T
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC-KILLTTRFKQVTDF 280
Query: 373 --------IPIAHARPNSNFTFTKRE----------------PIGVCGLITP-------- 400
I + H T T E P V P
Sbjct: 281 LSAATTTHISLDHHSM----TLTPDEVKSLLLKYLDCRPQDLPREVLT-TNPRRLSIIAE 335
Query: 401 --------WNYPLMMLSWKMAPCLAAGNTV-----VMKPSEVSPLTALKLAELSVRAGFP 447
W+ WK C + V++P+E + LSV FP
Sbjct: 336 SIRDGLATWDN------WKHVNCDKLTTIIESSLNVLEPAEYRKM----FDRLSV---FP 382
Query: 448 KGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM-----KSAAESNLKK----- 497
+I P + L + + F M ++ S E K+
Sbjct: 383 PSA-HI-P----------TILLSL--IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 498 --VSLELGGKSPLV------IFDDYNLDKA------VRMSMGGVFFN----------KGE 533
+ LEL K I D YN+ K + + F++ E
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488
Query: 534 NCISAGRIFVDSNIYDAFLE-KVVTEVKKMNHKAH-LDKLID---YCEK--AKSEGARLL 586
+F+D FLE K+ + N L+ L Y + ++
Sbjct: 489 RMTLFRMVFLD----FRFLEQKIRHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKY-- 541
Query: 587 IGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD 645
+RL V+A++ E L +T + A+ + +F + +
Sbjct: 542 ---ERL-----VNAILDFLPKIEENLICSKYTDLLRIALMA----EDEAIFEEAHKQVQ 588
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} Length = 318 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 8e-06
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTV 64
I ++ I IR + P + + +KV+ + + E + TP T+
Sbjct: 218 INWSDAATHIERCIRAFNPWPMSHFEVAENSIKVWQARV-ETRAVTQTPGTI 268
|
| >1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A Length = 314 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I ++L ++ IR + P + + G VKV+ +S+ D P T+ ++ I
Sbjct: 214 IDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASV-IDTATNAAPGTILEANKQGI 272
Query: 73 L 73
Sbjct: 273 Q 273
|
| >3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii} Length = 314 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 2e-05
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAI 72
I + EI +R + +P A T G ++++ +++ D + P + +D I
Sbjct: 213 IDWRKSAVEIARQVRAFNPTPIAFTYFEGQPMRIWRATV-VDEKTDFEPGVLVDADKKGI 271
Query: 73 L 73
Sbjct: 272 S 272
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 9e-05
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 13 IKFNLKGEEIHNFIRGL-DSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTV 64
++++ +HN +R + D PGA + + + V++S + + P +V
Sbjct: 208 LEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRV-HPHASKAQPGSV 259
|
| >2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A Length = 305 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 1e-04
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 13 IKFNLKGEEIHNFIRGL-DSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTV 64
++++ +HN +R + D PGA + + + V++S + + P +V
Sbjct: 208 LEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRV-HPHASKAQPGSV 259
|
| >1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1 Length = 260 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 13 IKFNLKGEEIHNFIRGLDSS--PGASTVLNGIEVKVFASSMWED 54
I + E+I+++IR LD P A ++ +SM
Sbjct: 202 ISPDFDLEKIYDYIRMLDGEGYPRAFIKYGKYRLEFSRASMKNG 245
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 709 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 99.64 | |
| 3tqq_A | 314 | Methionyl-tRNA formyltransferase; protein synthesi | 99.6 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 99.59 | |
| 3rfo_A | 317 | Methionyl-tRNA formyltransferase; structural genom | 99.58 | |
| 1fmt_A | 314 | Methionyl-tRNA FMet formyltransferase; initiator t | 99.57 | |
| 2bln_A | 305 | Protein YFBG; transferase, formyltransferase, L-AR | 99.49 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 99.44 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.24 | |
| 1zgh_A | 260 | Methionyl-tRNA formyltransferase; southeast collab | 98.46 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 97.98 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 97.91 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 97.41 | |
| 2cnr_A | 82 | FAS, ACP, acyl carrier protein; polykdetide, phosp | 97.26 | |
| 2ehs_A | 77 | ACP, acyl carrier protein; lipid transport, struct | 97.22 | |
| 2lol_A | 81 | ACP, acyl carrier protein; lipid transport; NMR {R | 97.18 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 97.15 | |
| 2ava_A | 82 | ACP I, acyl carrier protein I, chloroplast; four-h | 97.09 | |
| 1l0i_A | 78 | Acyl carrier protein; acyl chain binding, fatty ac | 97.06 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 97.05 | |
| 2jq4_A | 105 | AGR_C_4658P, hypothetical protein ATU2571; ATC2521 | 96.91 | |
| 1x3o_A | 80 | Acyl carrier protein; structural genomics, riken s | 96.84 | |
| 2dnw_A | 99 | Acyl carrier protein; ACP, fatty acid biosynthesis | 96.78 | |
| 2amw_A | 83 | Hypothetical protein NE2163; all helical protein, | 96.78 | |
| 2qnw_A | 82 | Acyl carrier protein; malaria, SGC, structural gen | 96.77 | |
| 1dv5_A | 80 | APO-DCP, APO-D-alanyl carrier protein; 3-helix bun | 96.66 | |
| 2kwl_A | 84 | ACP, acyl carrier protein; structural genomics, se | 96.64 | |
| 3gzm_A | 81 | Acyl carrier protein; helix bundle, phosphopanteth | 96.62 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 96.51 | |
| 1f80_D | 81 | Acyl carrier protein; transferase; HET: PN2; 2.30A | 96.49 | |
| 1nq4_A | 95 | Oxytetracycline polyketide synthase acyl carrier p | 96.47 | |
| 3ejb_A | 97 | Acyl carrier protein; protein-protein complex, cyt | 96.45 | |
| 1klp_A | 115 | ACP, ACPM, meromycolate extension acyl carrier pro | 96.44 | |
| 2l3v_A | 79 | ACP, acyl carrier protein; structural genomi seatt | 96.4 | |
| 2kjs_A | 87 | Putative acyl carrier protein; alpha, ACP, PNS, st | 96.4 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 96.34 | |
| 1or5_A | 83 | Acyl carrier protein; ACP, biosynthesis, frenolici | 96.22 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 96.18 | |
| 4dxe_H | 101 | ACP, acyl carrier protein; acyl-carrier-protein sy | 95.95 | |
| 1af8_A | 86 | Actinorhodin polyketide synthase acyl carrier Pro; | 95.86 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 95.84 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 95.25 | |
| 1vku_A | 100 | Acyl carrier protein; TM0175, structural genomics, | 94.93 | |
| 2kci_A | 87 | Putative acyl carrier protein; alpha, ACP, PCP, st | 94.68 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 94.6 | |
| 2lte_A | 103 | Specialized acyl carrier protein; APO protein, tra | 93.52 | |
| 2lki_A | 105 | Putative uncharacterized protein; helical bundle, | 94.39 | |
| 2l4b_A | 88 | Acyl carrier protein; infectious disease, human gr | 94.33 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 94.17 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 94.13 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 94.08 | |
| 2cgq_A | 113 | Acyl carrier protein ACPA; RV0033, protein transpo | 93.81 | |
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 93.8 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 93.38 | |
| 3ce7_A | 107 | Specific mitochodrial acyl carrier protein; malari | 92.98 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 92.54 | |
| 1fh1_A | 92 | NODF, nodulation protein F; ROOT nodulation factor | 92.37 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 91.8 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 91.77 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 91.72 | |
| 2kw2_A | 101 | Specialized acyl carrier protein; structural genom | 91.65 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 91.57 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 91.49 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 91.48 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 91.42 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 91.31 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 91.14 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 90.91 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 90.6 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 90.37 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 90.14 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 89.95 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 89.89 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 89.84 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 89.73 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 89.6 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 89.59 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 89.53 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 89.29 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 89.29 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 89.19 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 88.73 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 88.33 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 88.1 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 88.08 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 87.95 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 87.69 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 87.12 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 87.02 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 86.32 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 85.71 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 85.4 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 85.34 | |
| 2l9f_A | 102 | CALE8, meacp; transferase, acyl carrier protein; N | 84.23 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 83.38 | |
| 2fq1_A | 287 | Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy | 83.28 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 81.48 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-92 Score=799.35 Aligned_cols=426 Identities=38% Similarity=0.712 Sum_probs=402.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||+ .|+++|+.+|+++|++++++|++|+++
T Consensus 7 ~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK-VWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp BCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4689999999988889999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...++..+++.++||+++++++.+...|.. .+...+++|+|+|||++|+|||||+++.++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR----ETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE----TTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc----CCcceeEEecceeEEEEeccccCcchhhhh
Confidence 9999999999999999866799999999999999999887766543 235578899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.||+++.++++++.+||+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|+|||++++|+|+++|+++++++
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 667899999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC----CC---------------------------------CH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR----PG---------------------------------DV 598 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~----~g---------------------------------dl 598 (709)
++..+.+++.++|++++.+|+++++||..... +| |+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 78999999999999999999999999975421 11 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
||||+++|+++|||+++|||+|.++++++++++++|+||||++......+||||+|+||+|+++|.+++++|++ .|+
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~---~K~ 478 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTR---IKS 478 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEE---EEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhc---eeE
Confidence 99999999999999999999999999999999999999999887777789999999999999999999888887 799
Q ss_pred EEEecc
Q psy15158 679 VFINTY 684 (709)
Q Consensus 679 V~iN~~ 684 (709)
|+++..
T Consensus 479 v~i~~g 484 (490)
T 2wme_A 479 VQVELG 484 (490)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999974
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-87 Score=757.17 Aligned_cols=426 Identities=39% Similarity=0.681 Sum_probs=399.6
Q ss_pred CccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhc--hhcccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF--EGEWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~--~~~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| + .|+.+|..+|.++|++++++|++|
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 110 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG-EWSQETAETRGKKVRAIADKIKEH 110 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT-TTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc-ccccCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999988778899999999999999999999999999999999999 7 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+... .+...++.++|+|||++|+|||||+++
T Consensus 111 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~ 186 (520)
T 3ed6_A 111 REALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPI---PDTESKIVKEPVGVVTQITPWNYPLLQ 186 (520)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSS---TTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCC---CCCcccccccCccEEEEECCCccHHHH
Confidence 999999999999999999985 9999999999999999887766544321 234678999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|+
T Consensus 187 ~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~ 266 (520)
T 3ed6_A 187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIM 266 (520)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.++. ++||+++|+|||||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 267 ~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p 345 (520)
T 3ed6_A 267 KNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG 345 (520)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCT
T ss_pred HHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99885 899999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CCC--------------------------------
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RPG-------------------------------- 596 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~g-------------------------------- 596 (709)
++..+++++.+++++++++|+++++||.... ..|
T Consensus 346 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 425 (520)
T 3ed6_A 346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF 425 (520)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEe
Confidence 7899999999999999999999999997531 111
Q ss_pred -CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 597 -DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 597 -dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++.+|++
T Consensus 426 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~--- 502 (520)
T 3ed6_A 426 ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLV--- 502 (520)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE---
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhc---
Confidence 9999999999999999999999999999999999999999999988777889999999999999999999888887
Q ss_pred eeEEEEecc
Q psy15158 676 SGTVFINTY 684 (709)
Q Consensus 676 ~ktV~iN~~ 684 (709)
.|+|+++..
T Consensus 503 ~k~v~~~~~ 511 (520)
T 3ed6_A 503 SKHILTNTN 511 (520)
T ss_dssp EEEEEEESS
T ss_pred eEEEEEcCC
Confidence 799988763
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-87 Score=754.94 Aligned_cols=423 Identities=33% Similarity=0.574 Sum_probs=396.1
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 13 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA-GWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH-HHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999877788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 92 la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTP---DANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCS---STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCcccccc---CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 999999999999999985 999999999999999988776554432 1235578899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ ++||+++|||||||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 248 a~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 326 (484)
T 3ifg_A 248 AP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTES 326 (484)
T ss_dssp GG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 85 799999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
++..+.+++.++|++++++|+++++||...+..| |+||||
T Consensus 327 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (484)
T 3ifg_A 327 GATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELV 406 (484)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHH
Confidence 6899999999999999999999999997532111 999999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++ .|+|++.
T Consensus 407 ~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~---~k~v~~~ 483 (484)
T 3ifg_A 407 RLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVV---IKYLCVA 483 (484)
T ss_dssp HHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEE---EEEEEEE
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhc---eEEEEEe
Confidence 9999999999999999999999999999999999999987777789999999999999999999888887 6888753
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-87 Score=763.11 Aligned_cols=454 Identities=63% Similarity=1.060 Sum_probs=401.4
Q ss_pred CCCCcchhhHHHHHHhhcccccCCCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hc
Q psy15158 226 QGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GE 304 (709)
Q Consensus 226 G~d~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~ 304 (709)
|.|-..++.++.+..+++.+....+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ +.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~ 91 (517)
T 2o2p_A 12 GEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGL 91 (517)
T ss_dssp --------CCCCEEEEETTEEEEECCSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSG
T ss_pred CccchhhhhhHHHhhhhcccccCCCCCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCc
Confidence 33333333333333344443333345689999999875677899999999999999999999999999999999995 27
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCc
Q psy15158 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNF 384 (709)
Q Consensus 305 W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~ 384 (709)
|+++|..+|.++|++++++|++|+++|++++++|+|||+.++...|+..+++.++||+.+++++.+...+.....+.+..
T Consensus 92 w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~ 171 (517)
T 2o2p_A 92 WGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNL 171 (517)
T ss_dssp GGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCce
Confidence 99999999999999999999999999999999999999999873499999999999999998877765443100122235
Q ss_pred eeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHH
Q psy15158 385 TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEA 464 (709)
Q Consensus 385 ~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~ 464 (709)
.++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++
T Consensus 172 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~ 251 (517)
T 2o2p_A 172 TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQR 251 (517)
T ss_dssp EEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHH
T ss_pred EEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred HHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEe
Q psy15158 465 ISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544 (709)
Q Consensus 465 L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~ 544 (709)
|+.||+|++|+||||+++|+.|++.++.+++||+++|||||||+||++|||++.|++.++.++|.|+||.|+|++|||||
T Consensus 252 L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~ 331 (517)
T 2o2p_A 252 LSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVE 331 (517)
T ss_dssp HHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEE
T ss_pred HHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEe
Confidence 99999999999999999999999998823899999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC-------------
Q psy15158 545 SNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------- 596 (709)
Q Consensus 545 esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g------------- 596 (709)
++++|+|+++|+++++++ ++..+.+++.+++++++++|+++++||...+..|
T Consensus 332 ~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~ 411 (517)
T 2o2p_A 332 ESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVED 411 (517)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCC
Confidence 999999999999999876 6799999999999999999999999986432111
Q ss_pred --------------------C--HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCC
Q psy15158 597 --------------------D--VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFK 654 (709)
Q Consensus 597 --------------------d--ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k 654 (709)
| +||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|
T Consensus 412 ~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k 491 (517)
T 2o2p_A 412 HMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFK 491 (517)
T ss_dssp TSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCG
T ss_pred CChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcC
Confidence 7 999999999999999999999999999999999999999999987777789999999
Q ss_pred CCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 655 QSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 655 ~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+||+|+++|.+++.+|++ .|+++++
T Consensus 492 ~SG~Gr~~G~~~l~~~~~---~k~v~~~ 516 (517)
T 2o2p_A 492 QSGFGKDLGEAALNEYLR---IKTVTFE 516 (517)
T ss_dssp GGEECCBSHHHHHHTTEE---EEEEEEE
T ss_pred cCCcCccChHHHHHHhCC---ceEEEee
Confidence 999999999998888877 6888765
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-86 Score=751.54 Aligned_cols=423 Identities=34% Similarity=0.633 Sum_probs=395.6
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 26 ~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 103 (498)
T 4f3x_A 26 TQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV-GWSQTTPAERSNALLKIADAIEKEADE 103 (498)
T ss_dssp CCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 458999999987666 899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+++++++.+...+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 104 la~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 104 FAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEY---LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEE---ETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCC---cccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 9999999999999999336999999999999999988776654432 1235578999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 259 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998889999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ ++||+++|||||||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 260 a~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 260 AK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred Hh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCC-EEEECCccCCCCC---------------------------------CHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGA-RLLIGGKRLDRPG---------------------------------DVDAV 601 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga-~vl~GG~~~~~~g---------------------------------dldea 601 (709)
++..+++++.+++++++++|+ ++++||...+..| |+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 688999999999999999999 9999997532111 89999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
|+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|+||+|+++|.+++.+|++ .|+|++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~---~k~v~~ 495 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTA---VRHIMI 495 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEE---EEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhc---eEEEEE
Confidence 99999999999999999999999999999999999999988877889999999999999999999998887 688887
Q ss_pred ec
Q psy15158 682 NT 683 (709)
Q Consensus 682 N~ 683 (709)
+.
T Consensus 496 ~~ 497 (498)
T 4f3x_A 496 NH 497 (498)
T ss_dssp EC
T ss_pred eC
Confidence 64
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-86 Score=752.73 Aligned_cols=424 Identities=34% Similarity=0.586 Sum_probs=396.6
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS-GWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-hhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+.. . .+...++.++|+|||++|+|||||+.+.++
T Consensus 112 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~--~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAP--Q-NGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCS--S-TTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccc--c-ccccceeeccCceEEEEECCCcchHHHHHH
Confidence 999999999999999985 999999999999999988776554432 1 234578899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 267 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQC 267 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ ++||+++|||||||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 268 a~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 346 (504)
T 3ek1_A 268 AP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEP 346 (504)
T ss_dssp GG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccc
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC------------CC----------C---------CHHHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD------------RP----------G---------DVDAVIKR 604 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~------------~~----------g---------dldeaI~~ 604 (709)
++..+.+++.+++++++++|+++++||.... .+ | |+||||++
T Consensus 347 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 347 GVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 6899999999999999999999999986310 00 1 99999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
+|+++|||+++|||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++|.+++..|++ .|+|+++.
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~---~K~v~~~~ 502 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLE---TKYICSAY 502 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEE---EEEEEEEC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhc---eEEEEEec
Confidence 99999999999999999999999999999999999987777789999999999999999999888887 78998765
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-86 Score=750.30 Aligned_cols=424 Identities=32% Similarity=0.529 Sum_probs=397.7
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR-LTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC-SSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4589999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeee-cccCEEEEECCCCchHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKR-EPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~-~P~GVv~~I~PwNfPl~~~~ 409 (709)
|++++++|+|||+.++. .|+..+++.++||+..++++.+...|.. .+...++++ +|+|||++|+|||||+.+.+
T Consensus 91 la~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEK----PKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCC----GGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccC----CCceeeEeecccceEEEEECCCchHHHHHH
Confidence 99999999999999998 5999999999999999999887654432 234567888 99999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 884 899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC-CC---------------------------------CHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR-PG---------------------------------DVDA 600 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~-~g---------------------------------dlde 600 (709)
++..+++++.+++++++++|+++++||...+. .| |+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 78999999999999999999999999964211 11 9999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++.+|++ .|+|+
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~---~K~v~ 481 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVE---AQTVP 481 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEE---EEEEE
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcc---eEEEE
Confidence 999999999999999999999999999999999999999988878889999999999999999999888887 78998
Q ss_pred Eecc
Q psy15158 681 INTY 684 (709)
Q Consensus 681 iN~~ 684 (709)
++..
T Consensus 482 ~~~~ 485 (506)
T 3rh9_A 482 RGFA 485 (506)
T ss_dssp EC--
T ss_pred EcCc
Confidence 8753
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-85 Score=749.02 Aligned_cols=425 Identities=36% Similarity=0.633 Sum_probs=399.0
Q ss_pred ccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhc--hhcccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAF--EGEWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~--~~~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
.++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.+|.++|.++|++++++|+++
T Consensus 23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG-PWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS-SGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc-ccccCCHHHHHHHHHHHHHHHHHH
Confidence 4589999999887788999999999 99999999999999999999999999 7 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+... .+...++.++|+|||++|+|||||+.+
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~ 177 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIG---DDRLGLVLREPVGVVGIITPWNFPFII 177 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSC---TTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCC---CCceeEEEeccceEEEEECCCccHHHH
Confidence 99999999999999999995 59999999999999999888766544321 235578999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 258 ~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 258 EIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99885 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC-CC---------------------------------CH
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR-PG---------------------------------DV 598 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~-~g---------------------------------dl 598 (709)
++..+.+++.+++++++++|+++++||...+. .| |+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 68999999999999999999999999964321 11 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++ .|+
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~---~K~ 493 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQ---FKG 493 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEE---EEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhc---eEE
Confidence 99999999999999999999999999999999999999999988778889999999999999999999998888 799
Q ss_pred EEEecc
Q psy15158 679 VFINTY 684 (709)
Q Consensus 679 V~iN~~ 684 (709)
|+++..
T Consensus 494 v~~~~~ 499 (528)
T 3u4j_A 494 VHVTLG 499 (528)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 998864
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-85 Score=743.67 Aligned_cols=428 Identities=37% Similarity=0.647 Sum_probs=397.2
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-h---cccCCCHHHHHHHHHHHHHHHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-G---EWSRLSARDRGHLMFKLADLMEQ 326 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~---~W~~~s~~eR~~iL~r~AdlL~~ 326 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. + .|+.+|..+|.++|++++++|++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~ 87 (503)
T 3iwj_A 8 RQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTE 87 (503)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHH
T ss_pred CceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHH
Confidence 4689999999887788999999999999999999999999999999999995 1 79999999999999999999999
Q ss_pred cHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccc-cccCCCCCCCceeeeecccCEEEEECCCCchH
Q psy15158 327 NKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI-PIAHARPNSNFTFTKREPIGVCGLITPWNYPL 405 (709)
Q Consensus 327 ~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~-p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl 405 (709)
|+++|++++++|+|||+.++.. |+..+++.++||+.+++++.+... +.... ..+...++.++|+|||++|+|||||+
T Consensus 88 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 88 KKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLP-MDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCS-CTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccc-CCCccceEEEcCCceEEEECCCchHH
Confidence 9999999999999999999975 999999999999999988876542 21111 12345789999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHH
Q psy15158 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485 (709)
Q Consensus 406 ~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~ 485 (709)
.+.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---
Q psy15158 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 486 I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--- 562 (709)
|++.++. ++||+++|||||||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 246 i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 324 (503)
T 3iwj_A 246 IMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324 (503)
T ss_dssp HHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCC
Confidence 9999885 899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC--CCC--------------------------------
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--RPG-------------------------------- 596 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--~~g-------------------------------- 596 (709)
++..+++++.+++++++++|+++++||...+ ..|
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 404 (503)
T 3iwj_A 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTF 404 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEe
Confidence 6889999999999999999999999996432 111
Q ss_pred -CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 597 -DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 597 -dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++......+||||+|.||+|+++|.+++.+|++
T Consensus 405 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~--- 481 (503)
T 3iwj_A 405 STEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLS--- 481 (503)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE---
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhC---
Confidence 9999999999999999999999999999999999999999999987777789999999999999999999888877
Q ss_pred eeEEEEecc
Q psy15158 676 SGTVFINTY 684 (709)
Q Consensus 676 ~ktV~iN~~ 684 (709)
.|+|+++..
T Consensus 482 ~k~v~~~~~ 490 (503)
T 3iwj_A 482 VKQVTQYIS 490 (503)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEeCC
Confidence 799988753
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-86 Score=754.74 Aligned_cols=471 Identities=21% Similarity=0.315 Sum_probs=413.4
Q ss_pred hcC-ceeccccccccchhhhhHHhHhhccCCCCCcchhhHHHHHHhhcccccCCCccceecCeEeeCCCCCeeeeecCCC
Q psy15158 197 NLQ-ITLQNEDVLMSSVFRDFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPAN 275 (709)
Q Consensus 197 ~~~-~~~~ne~v~~~~~f~~f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~v~s~~~~~~~v~nP~t 275 (709)
.|. ++++|||++ .+..|++++.. ++.....+.... ...++||||+|+.+. ..+.++||+|
T Consensus 26 ~~~~~~~~nep~~-------------~~~~~~~~r~~--~~~a~~~~~~~~--~~~~~~I~G~~~~~~--~~~~~~~P~~ 86 (563)
T 4e3x_A 26 HTSSLKVANEPIL-------------AFSQGSPERDA--LQKALKDLKGQT--EAIPCVVGDEEVWTS--DIQYQLSPFN 86 (563)
T ss_dssp CCCCCCCCCCCCC-------------CCCTTCHHHHH--HHHHHHTTTTCC--EECCEEETTEEECCS--CEEEEEETTE
T ss_pred ccCCCCcCCCCCC-------------CCCCCcHHHHH--HHHHHHHHHhCC--ccCCeEECCEEeecC--CceeeeCCCC
Confidence 443 899999998 56666554444 222233333322 234589999999753 4677899998
Q ss_pred -CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHc-HHHHHHHHHHhcCChHHHHHhhHHHH
Q psy15158 276 -ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQN-KEELATIESLDSGAVYTLALKTHVGM 353 (709)
Q Consensus 276 -ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~-~~eLa~l~~~e~Gk~~~~a~~~ev~~ 353 (709)
++++++++.++.+|+++|+++|++||+ .|+.+|.++|+++|++++++|+++ +++|+.++++|+|||+.++..+++.+
T Consensus 87 ~~~~i~~~~~a~~~dv~~Av~aA~~A~~-~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~ 165 (563)
T 4e3x_A 87 HAHKVAKFCYADKALLNRAIDAALAARK-EWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAE 165 (563)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHH
Confidence 789999999999999999999999998 999999999999999999999999 99999999999999999998644999
Q ss_pred HHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHH
Q psy15158 354 SIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLT 433 (709)
Q Consensus 354 aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplt 433 (709)
++++++||+.+++++.+.... . .+.+...+.+++|+|||++|+|||||+.+..++++||| +||+||+|||+.+|++
T Consensus 166 ~~~~~~~~a~~~~~~~~~~~~-~--~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~s 241 (563)
T 4e3x_A 166 LIDFFRFNAKFAVELEGEQPI-S--VPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLA 241 (563)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC-C--CTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHhhCCCcc-C--CCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHH
Confidence 999999999999988875322 1 12233456778889999999999999999999999999 6999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCC------cEEEcCCCccc
Q psy15158 434 ALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLK------KVSLELGGKSP 507 (709)
Q Consensus 434 a~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k------~v~lElGGknp 507 (709)
+.++++++.+||+|+||+|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+++ +++ |+++|||||||
T Consensus 242 a~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p 320 (563)
T 4e3x_A 242 SYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNF 320 (563)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEE
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCccccCCceeccCCCCCc
Confidence 99999999999999999999999989999999999999999999999999999999986 666 59999999999
Q ss_pred EEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------------hcHHHHHHH
Q psy15158 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------------NHKAHLDKL 571 (709)
Q Consensus 508 ~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------------~~~~~~~~i 571 (709)
+||++|||++.|++.++.++|.|+||.|+|++|+|||+++||+|+++|+++++++ ++..+++++
T Consensus 321 ~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv 400 (563)
T 4e3x_A 321 HFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARI 400 (563)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHH
T ss_pred eeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999865 578999999
Q ss_pred HHHHHHHHh-cCCEEEECCccCCCCC---------------------------------C--HHHHHHHH-hcCCCCCeE
Q psy15158 572 IDYCEKAKS-EGARLLIGGKRLDRPG---------------------------------D--VDAVIKRA-NSTEYGLAS 614 (709)
Q Consensus 572 ~~~i~~a~~-~Ga~vl~GG~~~~~~g---------------------------------d--ldeaI~~~-N~t~yGLta 614 (709)
.+||+++++ +|+++++||...+..| | +||||+++ |+++|||++
T Consensus 401 ~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta 480 (563)
T 4e3x_A 401 KKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480 (563)
T ss_dssp HHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEE
T ss_pred HHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEE
Confidence 999999996 7999999996432222 3 79999999 799999999
Q ss_pred EEEccchHHHHHHHHhcC--eeeEEEcCCCCCC--CCCCCCCCCCCCCC-CccChHHHHHHHHHhceeEEEEeccCCCCC
Q psy15158 615 GIFTSDINKAMYFVDKID--SGTVFINTYNKTD--VAAPFGGFKQSGFG-KDLDINKAMYFVDKIDSGTVFINTYNKTDV 689 (709)
Q Consensus 615 ~V~T~d~~~a~~va~~l~--aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~~G~~~~~~ftr~~~~ktV~iN~~~~~~~ 689 (709)
+|||+|.+++++++++++ +|+||||+++++. ..+||||+|.||+| ++.|.+++.+|++ .|+|..+...+.++
T Consensus 481 ~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~---~k~v~~~~~~~~~~ 557 (563)
T 4e3x_A 481 AVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTS---PQVIKETHKPLGDW 557 (563)
T ss_dssp EEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBC---CEEEEEECSCCCCS
T ss_pred EEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCc---eEEEEEeCcCCCcc
Confidence 999999999999999976 9999999987654 46899999999999 7888887777776 79999998777888
Q ss_pred CCCCCC
Q psy15158 690 AAPFGG 695 (709)
Q Consensus 690 ~~Pf~g 695 (709)
.||||.
T Consensus 558 ~yp~~~ 563 (563)
T 4e3x_A 558 RYSYMQ 563 (563)
T ss_dssp SCTTCC
T ss_pred cCCCCC
Confidence 899973
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-86 Score=746.14 Aligned_cols=425 Identities=30% Similarity=0.525 Sum_probs=397.8
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 13 ~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 91 (497)
T 3k2w_A 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK-AWAKLTARTRQNMLRTFANKIRENKHI 91 (497)
T ss_dssp TCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH-HHHTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred cceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999987788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+..++++.+...+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 92 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 167 (497)
T 3k2w_A 92 LAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSD---NQDEKIYIHKVPRGVVVGITAWNFPLALAGR 167 (497)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECS---STTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC---CCCcceeEEEcCCceEEEECCCccHHHHHHH
Confidence 999999999999999984 999999999999999988877654432 2335678899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 168 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~a 247 (497)
T 3k2w_A 168 KIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTS 247 (497)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 248 a~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~ 326 (497)
T 3k2w_A 248 AE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326 (497)
T ss_dssp TT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCcc--CCC--CC---------------------------------CH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKR--LDR--PG---------------------------------DV 598 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~--~~~--~g---------------------------------dl 598 (709)
++..+.+++.+++++++++|+++++||.. .+. .| |+
T Consensus 327 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 406 (497)
T 3k2w_A 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSM 406 (497)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCH
Confidence 68899999999999999999999999962 111 11 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++.+|++ .|+
T Consensus 407 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~---~k~ 483 (497)
T 3k2w_A 407 EQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLE---KKT 483 (497)
T ss_dssp HHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEE---EEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcc---eEE
Confidence 99999999999999999999999999999999999999999988888889999999999999999999888887 799
Q ss_pred EEEecc
Q psy15158 679 VFINTY 684 (709)
Q Consensus 679 V~iN~~ 684 (709)
|+++..
T Consensus 484 v~~~~~ 489 (497)
T 3k2w_A 484 VYINEA 489 (497)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 988763
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-85 Score=745.40 Aligned_cols=422 Identities=31% Similarity=0.486 Sum_probs=392.0
Q ss_pred CccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
..++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ-TWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH-hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 567999999999 999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHH-HHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW-CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~-~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
++|++++++|+|||+.++.. |+..+++.++||+.+ .+.+.++..+.. .+...++.++|+|||++|+|||||+.+
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~ 188 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSR----PGEQNRYFYTPMGVTVTISPWNFALAI 188 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCC----TTEEEEEEEEECCEEEEECCSTTTTHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeeccc----CCcceeeecCCCcEEEEECCCchHHHH
Confidence 99999999999999999986 999999999999999 666766654432 245678999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++..+++++.+||+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 268 (538)
T 3qan_A 189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268 (538)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHhcC------CCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHh
Q psy15158 488 KSAAESN------LKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK 561 (709)
Q Consensus 488 ~~aa~~~------~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~ 561 (709)
+.++. + +||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|++++++
T Consensus 269 ~~aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 347 (538)
T 3qan_A 269 ERAAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347 (538)
T ss_dssp HHHTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTT
T ss_pred HHhhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHh
Confidence 99885 5 8999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred h---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC------------------------------
Q psy15158 562 M---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------------------ 596 (709)
Q Consensus 562 l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g------------------------------ 596 (709)
+ ++..+.+++.+++++++++| ++++||...+..|
T Consensus 348 ~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 426 (538)
T 3qan_A 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFS 426 (538)
T ss_dssp CCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred ccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEE
Confidence 6 68899999999999999999 9999996532111
Q ss_pred ---CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEc-CCCCC-CCCCCCCCCCCCCCC-CccChHHHHHH
Q psy15158 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN-TYNKT-DVAAPFGGFKQSGFG-KDLDINKAMYF 670 (709)
Q Consensus 597 ---dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN-~~~~~-~~~~PFGG~k~SG~G-~~~G~~~~~~f 670 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+|| ..... .+.+||||+|.||+| +++|.+++..|
T Consensus 427 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~f 506 (538)
T 3qan_A 427 KANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506 (538)
T ss_dssp EESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGG
T ss_pred EeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHh
Confidence 9999999999999999999999999999999999999999999 55443 568999999999999 99999998888
Q ss_pred HHHhceeEEEEecc
Q psy15158 671 VDKIDSGTVFINTY 684 (709)
Q Consensus 671 tr~~~~ktV~iN~~ 684 (709)
++ .|+|+++..
T Consensus 507 t~---~k~v~~~~~ 517 (538)
T 3qan_A 507 MQ---AKTVSEMYA 517 (538)
T ss_dssp EE---EEEEEEEC-
T ss_pred hC---eEEEEEecC
Confidence 87 799988764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-85 Score=740.01 Aligned_cols=422 Identities=37% Similarity=0.712 Sum_probs=394.2
Q ss_pred ccceecCeEeeCCCCCe-eeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSS-MECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~-~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.++||||+|+.+.++++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 98 (503)
T 1a4s_A 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-KWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998766778 99999999999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++.. |+..+++.++||+++++++.++..+.. + +...++.++|+|||++|+|||||+.+.+
T Consensus 99 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~---~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 173 (503)
T 1a4s_A 99 NIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLP---G-GAFAYTRREPLGVCAGILAWNYPFMIAA 173 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECG---G-GCEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCC---C-CceeEEEEecCceEEEECCCcchHHHHH
Confidence 9999999999999999974 999999999999999988776544432 1 2356889999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++ +++++|+.||+|++|+||||+.+|+.|++.
T Consensus 174 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 252 (503)
T 1a4s_A 174 WKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988 899999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 253 aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 253 SAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 885 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccC--C----CCC--------------------------------
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL--D----RPG-------------------------------- 596 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~--~----~~g-------------------------------- 596 (709)
++..+.+++.+++++++++|+++++||... + ..|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 678999999999999999999999998653 1 112
Q ss_pred -CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 597 -DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 597 -dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++.+|++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~--- 488 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQ--- 488 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEE---
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcC---
Confidence 9999999999999999999999999999999999999999999987777789999999999999999999888877
Q ss_pred eeEEEEec
Q psy15158 676 SGTVFINT 683 (709)
Q Consensus 676 ~ktV~iN~ 683 (709)
.|+++++.
T Consensus 489 ~k~v~~~~ 496 (503)
T 1a4s_A 489 LKTVIVEM 496 (503)
T ss_dssp EEEEEECC
T ss_pred ceEEEEcc
Confidence 78988764
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-84 Score=739.85 Aligned_cols=424 Identities=36% Similarity=0.663 Sum_probs=396.2
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ-RWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3479999999876678899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++. .|+..+++.++||+++++++.+...+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 106 la~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 181 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPV---DRDWLYYTVRVPAGPVGIITPWNAPLMLSTW 181 (515)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCB---TTTEEEEEEEEECCCEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccC---CCCceeEEEEecCCceEEECCCCchhhhhhh
Confidence 99999999999999998 5999999999999999988877654432 1234568899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.+
T Consensus 182 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~a 261 (515)
T 2d4e_A 182 RIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261 (515)
T ss_dssp HHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 262 a~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 340 (515)
T 2d4e_A 262 AD-HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDP 340 (515)
T ss_dssp GG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTST
T ss_pred hh-cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccc
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC--------CCC-------------------------------
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--------RPG------------------------------- 596 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--------~~g------------------------------- 596 (709)
++..+.+++.++|++++++|+++++||...+ ..|
T Consensus 341 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 341 ETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEee
Confidence 6899999999999999999999999986421 011
Q ss_pred -CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 597 -DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 597 -dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++.+|++
T Consensus 421 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~--- 497 (515)
T 2d4e_A 421 KDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTD--- 497 (515)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEE---
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCc---
Confidence 9999999999999999999999999999999999999999999987767789999999999999999999998887
Q ss_pred eeEEEEec
Q psy15158 676 SGTVFINT 683 (709)
Q Consensus 676 ~ktV~iN~ 683 (709)
.|+|+++.
T Consensus 498 ~K~v~~~~ 505 (515)
T 2d4e_A 498 LKTIALPL 505 (515)
T ss_dssp EEEEEEES
T ss_pred eeEEEEcC
Confidence 79998875
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-85 Score=743.93 Aligned_cols=420 Identities=40% Similarity=0.676 Sum_probs=394.3
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 15 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 15 ASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK-EWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHh----hhCccccccCCCCCCCceeeeecccCEEEEECCCCchHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK----ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLM 406 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~----~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~ 406 (709)
|++++++|+|||+.++ |+..+++.++||+.++++ +.++..+.. .+. .+++++|+|||++|+|||||+.
T Consensus 94 la~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~----~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 94 LSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG----GDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp HHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS----SSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC----CCc-ceEEEcCccEEEEECCCcchHH
Confidence 9999999999999987 899999999999999988 766655431 234 7899999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHH
Q psy15158 407 MLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486 (709)
Q Consensus 407 ~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I 486 (709)
+.+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+++++|+.||+|++|+||||+++|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 78899999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----
Q psy15158 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---- 562 (709)
Q Consensus 487 ~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---- 562 (709)
++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999885 899999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC---CCC--------------------------------
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD---RPG-------------------------------- 596 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~---~~g-------------------------------- 596 (709)
++..+++++.++|++++++|+++++||...+ ..|
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDF 403 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEe
Confidence 6889999999999999999999999993011 112
Q ss_pred -CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 597 -DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 597 -dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++.+|++
T Consensus 404 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~--- 480 (517)
T 3r31_A 404 DDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSE--- 480 (517)
T ss_dssp CCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEE---
T ss_pred CCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhc---
Confidence 9999999999999999999999999999999999999999999987777889999999999999999999888887
Q ss_pred eeEEEEecc
Q psy15158 676 SGTVFINTY 684 (709)
Q Consensus 676 ~ktV~iN~~ 684 (709)
.|+|+++..
T Consensus 481 ~K~v~~~~~ 489 (517)
T 3r31_A 481 LKTVYVSTG 489 (517)
T ss_dssp EEEEEECCC
T ss_pred eEEEEEcCC
Confidence 799988764
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-85 Score=739.64 Aligned_cols=427 Identities=47% Similarity=0.833 Sum_probs=395.5
Q ss_pred CccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-h-cccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-G-EWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~-~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ + .|+.+|..+|.++|++++++|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 34579999999876678899999999999999999999999999999999995 1 699999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+++|++++++|+|||+.++...|+..+++.++||++.++++.++..+. ..+...++.++|+|||++|+|||||+.+
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM----DGNFFTYTRSEPVGVCGQIIPWNFPLLM 175 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC----SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec----cCCcceeEEecCCceEEEECCCcchHHH
Confidence 999999999999999998765699999999999999998887664432 1234568899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 255 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (501)
T 1bxs_A 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 335 (501)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCC
Confidence 998834899999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHH
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVD 599 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dld 599 (709)
++..+++++.+++++++++|+++++||...+..| |+|
T Consensus 336 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (501)
T 1bxs_A 336 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 415 (501)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHH
Confidence 6899999999999999999999999886421111 999
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++ .|++
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~---~K~v 492 (501)
T 1bxs_A 416 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE---VKTV 492 (501)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE---EEEE
T ss_pred HHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhC---eeEE
Confidence 9999999999999999999999999999999999999999987777789999999999999999998888877 7898
Q ss_pred EEec
Q psy15158 680 FINT 683 (709)
Q Consensus 680 ~iN~ 683 (709)
+++.
T Consensus 493 ~~~~ 496 (501)
T 1bxs_A 493 TIKI 496 (501)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8764
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-85 Score=738.93 Aligned_cols=427 Identities=43% Similarity=0.773 Sum_probs=395.6
Q ss_pred CccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchh--cccCCCHHHHHHHHHHHHHHHHHc
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEG--EWSRLSARDRGHLMFKLADLMEQN 327 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~--~W~~~s~~eR~~iL~r~AdlL~~~ 327 (709)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+. .|+.+|..+|.++|++++++|++|
T Consensus 19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (500)
T 1o04_A 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 98 (500)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence 345799999998766788999999999999999999999999999999999951 699999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHH
Q psy15158 328 KEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 328 ~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
+++|++++++|+|||+.++...|+..+++.++||+++++++.++..+. ..+...++.++|+|||++|+|||||+.+
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 174 (500)
T 1o04_A 99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI----DGDFFSYTRHEPVGVCGQIIPWNFPLLM 174 (500)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC----SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec----CCCceEEEEEecCCcEEEECCCCchHHH
Confidence 999999999999999998765699999999999999998877654432 1234568899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 334 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 334 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCc
Confidence 998834899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHH
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVD 599 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dld 599 (709)
++..+++++.+++++++++|+++++||...+..| |+|
T Consensus 335 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 335 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 6899999999999999999999999986531111 999
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++.+|++ .|++
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~---~K~v 491 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE---VKTV 491 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE---EEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcc---eEEE
Confidence 9999999999999999999999999999999999999999987667789999999999999999998888877 7898
Q ss_pred EEec
Q psy15158 680 FINT 683 (709)
Q Consensus 680 ~iN~ 683 (709)
+++.
T Consensus 492 ~~~~ 495 (500)
T 1o04_A 492 TVKV 495 (500)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8764
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-85 Score=736.21 Aligned_cols=423 Identities=35% Similarity=0.620 Sum_probs=395.9
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP-AWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||..++.. |+..+++.++||+..+.+..+...+.. ..+...+++++|+|||++|+|||||+.+.++
T Consensus 89 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGH---QADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCS---STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccc---CCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 999999999999999985 999999999999999887766544432 1235578899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 245 a~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 323 (481)
T 3jz4_A 245 AK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDN 323 (481)
T ss_dssp TT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTST
T ss_pred hh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVI 602 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI 602 (709)
++..+.+++.+++++++++|+++++||...+..| |+||||
T Consensus 324 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 403 (481)
T 3jz4_A 324 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVI 403 (481)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHH
Confidence 6899999999999999999999999996522111 999999
Q ss_pred HHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 603 ~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++..|++ .|+|++.
T Consensus 404 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~---~k~v~~~ 480 (481)
T 3jz4_A 404 AQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLE---IKYMCIG 480 (481)
T ss_dssp HHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEE---EEEEEEE
T ss_pred HHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhc---eeEEEEe
Confidence 9999999999999999999999999999999999999987777789999999999999999999888887 6888764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-85 Score=741.41 Aligned_cols=428 Identities=29% Similarity=0.490 Sum_probs=395.2
Q ss_pred CCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 249 ~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK-IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 345689999999887788999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCC---CCceeeeecccCEEEEECCCCchH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPN---SNFTFTKREPIGVCGLITPWNYPL 405 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~---~~~~~~~~~P~GVv~~I~PwNfPl 405 (709)
++|++++++|+|||+.++.. |+..+++.++||+..++++.+...+.... +. +...++.++|+|||++|+|||||+
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQF-KGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGS-TTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccc-ccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 99999999999999999986 99999999999999998877765443211 11 345688999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHH
Q psy15158 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485 (709)
Q Consensus 406 ~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~ 485 (709)
++.+++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---
Q psy15158 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 486 I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--- 562 (709)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999875 89999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHH
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAV 601 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldea 601 (709)
++..+.+++.+++++++++|+++++||.... .+ | |+|||
T Consensus 324 ~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deA 403 (505)
T 3prl_A 324 SPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEA 403 (505)
T ss_dssp CTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHH
T ss_pred CCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHH
Confidence 6889999999999999999999999985210 00 1 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCC-CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~-~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
|+++|+++|||+++|||+|.++++++++++++|+|+||++.. ....+||||+|.||+|+++|.+++..|++ .|+|+
T Consensus 404 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~---~k~v~ 480 (505)
T 3prl_A 404 ISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTR---ERVTV 480 (505)
T ss_dssp HHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEE---EEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhc---eEEEE
Confidence 999999999999999999999999999999999999999876 34678999999999999999999998887 79999
Q ss_pred EeccC
Q psy15158 681 INTYN 685 (709)
Q Consensus 681 iN~~~ 685 (709)
++...
T Consensus 481 ~~~~~ 485 (505)
T 3prl_A 481 LNLAE 485 (505)
T ss_dssp EEC--
T ss_pred EeCCC
Confidence 88643
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-84 Score=734.40 Aligned_cols=425 Identities=32% Similarity=0.581 Sum_probs=394.1
Q ss_pred CCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 249 ~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP-EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 344589999999876678899999999999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+.. .+ +...++.++|+|||++|+|||||+.+.
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~ 159 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSD--RP-GENILLFKRALGVTTGILPWNFPFFLI 159 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCS--ST-TEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccC--CC-CceeEEEEeccceEEEECCCchHHHHH
Confidence 9999999999999999998 4999999999999999888776654432 12 345688999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++
T Consensus 160 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 239 (479)
T 2imp_A 160 ARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239 (479)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 240 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 240 TAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 9884 899999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred ----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHH
Q psy15158 563 ----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVD 599 (709)
Q Consensus 563 ----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dld 599 (709)
+++.+.+++.+++++++++|+++++||...+..| |+|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~ 398 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLE 398 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHH
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHH
Confidence 4689999999999999999999999986421111 999
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++...++.+||||+|.||+|+++|.+++.+|++ .|++
T Consensus 399 eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~---~k~v 475 (479)
T 2imp_A 399 DAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQ---TQVV 475 (479)
T ss_dssp HHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEE---EEEE
T ss_pred HHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcC---eeEE
Confidence 9999999999999999999999999999999999999999987777789999999999999999998888877 6888
Q ss_pred EEe
Q psy15158 680 FIN 682 (709)
Q Consensus 680 ~iN 682 (709)
+++
T Consensus 476 ~~~ 478 (479)
T 2imp_A 476 YLQ 478 (479)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-84 Score=734.09 Aligned_cols=417 Identities=31% Similarity=0.504 Sum_probs=385.0
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|.++
T Consensus 26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ-TWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeee-ecccCEEEEECCCCchHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTK-REPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~-~~P~GVv~~I~PwNfPl~~~~ 409 (709)
|++++++|+|||+.++...|+..+++.++|++..+........+ +.+...++. ++|+|||++|+|||||+++.+
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVT 179 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHH
Confidence 99999999999999998459999999999999887654432111 112335677 999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.
T Consensus 180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~ 259 (497)
T 3i44_A 180 LKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKN 259 (497)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ ++||+++|||||||+||++||| +.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 260 aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~ 337 (497)
T 3i44_A 260 ASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ 337 (497)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred Hhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 885 8999999999999999999999 9999999999999999999999999999999999999999999876
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCc-cCCC--CC---------------------------------CH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGK-RLDR--PG---------------------------------DV 598 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~-~~~~--~g---------------------------------dl 598 (709)
++..+.+++.++|++++++|+++++||. .... .| |+
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 417 (497)
T 3i44_A 338 TGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTE 417 (497)
T ss_dssp CSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCH
Confidence 7899999999999999999999999993 2110 11 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
||||+++|+++|||+++|||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|.+++.+|++ .|+
T Consensus 418 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~---~K~ 493 (497)
T 3i44_A 418 DEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLD---TKA 493 (497)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEE---EEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcc---eeE
Confidence 999999999999999999999999999999999999999994 4455689999999999999999999888877 566
Q ss_pred E
Q psy15158 679 V 679 (709)
Q Consensus 679 V 679 (709)
|
T Consensus 494 v 494 (497)
T 3i44_A 494 I 494 (497)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-85 Score=740.88 Aligned_cols=423 Identities=26% Similarity=0.425 Sum_probs=391.9
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 27 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (521)
T 4e4g_A 27 LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP-KWAATNPQRRARVFMKFVQLLNDNMNE 105 (521)
T ss_dssp ECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-HHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+..++.+.+...+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 106 la~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 181 (521)
T 4e4g_A 106 LAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGA---GPGIDMYSIRQPVGIGAGITPFNFPGMIPMW 181 (521)
T ss_dssp HHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEE---ETTEEEEEEEEECCEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC---CCCcceeEEEcCCcEEEEECCCcchHHHHHH
Confidence 999999999999999985 999999999999998877766543321 1234578899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+ .+.+++|+.||+|++|+||||+++|+.|++.+
T Consensus 182 ~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~a 260 (521)
T 4e4g_A 182 MFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTA 260 (521)
T ss_dssp HHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996 45679999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCc-cHHHHHHHHHHHHHhh-------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN-IYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~es-i~d~fl~~L~~~~~~l------- 562 (709)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|+|||++ ++|+|+++|+++++++
T Consensus 261 a~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~ 339 (521)
T 4e4g_A 261 AM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTD 339 (521)
T ss_dssp HH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTC
T ss_pred hh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCC
Confidence 85 89999999999999999999999999999999999999999999999999999 9999999999999886
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC----CCC---------------------------------C
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD----RPG---------------------------------D 597 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~----~~g---------------------------------d 597 (709)
++..+++++.+++++++.+|+++++||.... ..| |
T Consensus 340 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 419 (521)
T 4e4g_A 340 EKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARN 419 (521)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSS
T ss_pred ccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCC
Confidence 6889999999999999999999999996421 111 9
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCC--CccChHHHHHHHHHh
Q psy15158 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFG--KDLDINKAMYFVDKI 674 (709)
Q Consensus 598 ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G--~~~G~~~~~~ftr~~ 674 (709)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|.||+| +++|.+++..|++
T Consensus 420 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~-- 497 (521)
T 4e4g_A 420 YEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTR-- 497 (521)
T ss_dssp HHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEE--
T ss_pred HHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhhe--
Confidence 999999999999999999999999999999999999999999986544 57899999999999 7899999888887
Q ss_pred ceeEEEEec
Q psy15158 675 DSGTVFINT 683 (709)
Q Consensus 675 ~~ktV~iN~ 683 (709)
.|+|+++.
T Consensus 498 -~K~v~~~~ 505 (521)
T 4e4g_A 498 -TKTITSRW 505 (521)
T ss_dssp -EEEEEECC
T ss_pred -EEEEEEec
Confidence 79998875
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-84 Score=733.62 Aligned_cols=422 Identities=33% Similarity=0.560 Sum_probs=392.9
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch-hcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~-~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ +.|+.+|..+|.++|++++++|++|+++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999876678899999999999999999999999999999999995 2799999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+++++++.++..+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG----SYGQSIVSREPVGVVGAIVAWNVPLFLAVN 165 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE----TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC----CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence 9999999999999998734899999999999999988877654422 223568899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+++++|+.||+|++|+||||+++|+.|++.+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a 244 (495)
T 3b4w_A 166 KIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244 (495)
T ss_dssp HHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 888999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 245 a~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 323 (495)
T 3b4w_A 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323 (495)
T ss_dssp HH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCT
T ss_pred hh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccC
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC--CCC---------------------------------CHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--RPG---------------------------------DVDA 600 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--~~g---------------------------------dlde 600 (709)
++..+++++.+++++++++|+++++||...+ ..| |+||
T Consensus 324 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 403 (495)
T 3b4w_A 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEED 403 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHH
Confidence 6899999999999999999999999986422 112 9999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|.+++++|++ .|+++
T Consensus 404 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~---~k~v~ 479 (495)
T 3b4w_A 404 AIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQ---QKSVL 479 (495)
T ss_dssp HHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEE---EEEEE
T ss_pred HHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcc---eeEEE
Confidence 999999999999999999999999999999999999999987 66789999999999999999998888877 68888
Q ss_pred Eec
Q psy15158 681 INT 683 (709)
Q Consensus 681 iN~ 683 (709)
++.
T Consensus 480 ~~~ 482 (495)
T 3b4w_A 480 LPM 482 (495)
T ss_dssp CCT
T ss_pred Ecc
Confidence 764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-84 Score=730.94 Aligned_cols=421 Identities=37% Similarity=0.656 Sum_probs=391.7
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.+ ++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 24 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 101 (495)
T 1wnd_A 24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-EWGQTTPKVRAECLLKLADVIEENGQV 101 (495)
T ss_dssp CCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998755 7899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||+++++++.++..|.. .+ +...++.++|+|||++|+|||||+.+.++
T Consensus 102 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~-~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (495)
T 1wnd_A 102 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY--LE-GHTSMIRRDPLGVVASIAPWNYPLMMAAW 178 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEE--ET-TEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC--CC-CceeEEeeecCCeEEEECCCcchHHHHHH
Confidence 9999999999999998754899999999999999988776554432 12 23568899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 257 (495)
T 1wnd_A 179 KLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257 (495)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 258 a~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 336 (495)
T 1wnd_A 258 AS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDE 336 (495)
T ss_dssp GG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTST
T ss_pred Hh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccC
Confidence 85 799999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcC-CEEEECCc-cCCCCC---------------------------------CHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEG-ARLLIGGK-RLDRPG---------------------------------DVDA 600 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~G-a~vl~GG~-~~~~~g---------------------------------dlde 600 (709)
++..+++++.+++++++++| +++++||. ..+ .| |+||
T Consensus 337 ~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (495)
T 1wnd_A 337 STELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 415 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHH
Confidence 67999999999999999999 99999986 321 11 9999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++ .|+++
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~---~k~v~ 492 (495)
T 1wnd_A 416 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTV---VRHVM 492 (495)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE---EEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhC---eEEEE
Confidence 999999999999999999999999999999999999999977666789999999999999999998888877 68887
Q ss_pred Ee
Q psy15158 681 IN 682 (709)
Q Consensus 681 iN 682 (709)
++
T Consensus 493 ~~ 494 (495)
T 1wnd_A 493 VK 494 (495)
T ss_dssp EE
T ss_pred ec
Confidence 64
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-84 Score=728.69 Aligned_cols=425 Identities=28% Similarity=0.480 Sum_probs=373.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+++++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK-EWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999877788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++|++..++++.+...+.. ..++...+++++|+|||++|+|||||+.+.++
T Consensus 86 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 86 IIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPS--DIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCC--SSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccc--CCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 999999999999999986 999999999999999988776654422 12335678999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHH-HHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTA-LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta-~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++||++||+||+|||+.+|+++ .++.+++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999888899999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 885 789999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccC----------C-CC----------C---------CHHHHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL----------D-RP----------G---------DVDAVIKR 604 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~----------~-~~----------g---------dldeaI~~ 604 (709)
++..+.+++.+++++++++|+++++||... + .+ | |+||||++
T Consensus 322 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~ 401 (485)
T 4dng_A 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDM 401 (485)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHH
Confidence 688999999999999999999999998521 0 00 1 99999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
+|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|.+++..|++ .|+++++.
T Consensus 402 an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~---~k~v~~~~ 478 (485)
T 4dng_A 402 ANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTV---TKWISIQK 478 (485)
T ss_dssp HHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEE---EEEEEEEC
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhc---eEEEEEec
Confidence 9999999999999999999999999999999999998754 5678999999999999999999998888 78998876
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-83 Score=726.82 Aligned_cols=427 Identities=32% Similarity=0.505 Sum_probs=379.1
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+++++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 13 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 13 TKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA-EWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-HhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4589999999887788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||..++.. |+..+++.++||+.+++++.+ ..+.. ...+...++.++|+|||++|+|||||+.+.++
T Consensus 92 la~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPS--NTPGKENRVYRVAKGVVGVISPWNFPLNLSIR 167 (508)
T ss_dssp HHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 999999999999999986 999999999999998877665 44322 11235678999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHH-HHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTA-LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta-~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++||++||+||+|||+.+|+++ .++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.
T Consensus 168 ~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~ 247 (508)
T 3r64_A 168 SVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGEL 247 (508)
T ss_dssp HHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999888999999999999999999999999999998
Q ss_pred HHhc-CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 490 AAES-NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 490 aa~~-~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
+++. +++|+++|||||||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 248 aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 327 (508)
T 3r64_A 248 AINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPS 327 (508)
T ss_dssp HHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred hhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCc
Confidence 8731 689999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-----------CC----------C---------CHHHHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-----------RP----------G---------DVDAVIK 603 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-----------~~----------g---------dldeaI~ 603 (709)
++..+.+++.+++++++++|+++++||.... .+ | |+||||+
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (508)
T 3r64_A 328 AEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAE 407 (508)
T ss_dssp SSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHH
Confidence 7899999999999999999999999985310 00 1 9999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|.+++.+|++ .|+++++
T Consensus 408 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~---~k~v~~~ 484 (508)
T 3r64_A 408 LANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTT---DRWIGIK 484 (508)
T ss_dssp HHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEE---EEEEEEE
T ss_pred HHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhc---eEEEEEe
Confidence 99999999999999999999999999999999999998755 5678999999999999999999888887 7999988
Q ss_pred ccC
Q psy15158 683 TYN 685 (709)
Q Consensus 683 ~~~ 685 (709)
...
T Consensus 485 ~~~ 487 (508)
T 3r64_A 485 RSA 487 (508)
T ss_dssp CCS
T ss_pred ccc
Confidence 643
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-83 Score=725.40 Aligned_cols=422 Identities=29% Similarity=0.496 Sum_probs=385.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCC-CCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPA-NESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~-tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK-TWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 357999999963 5689999999 6999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++. .|+..+++.++||+..++++.+...+... . .+...++.++|+|||++|+|||||+++.+
T Consensus 115 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~-~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP-Y-PGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC-C-TTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC-C-CCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999998 49999999999999999888875433111 1 23456889999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999998
Q ss_pred HHh-----cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--
Q psy15158 490 AAE-----SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-- 562 (709)
Q Consensus 490 aa~-----~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-- 562 (709)
++. +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 872 4799999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred ------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------C
Q psy15158 563 ------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------D 597 (709)
Q Consensus 563 ------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------d 597 (709)
++..+++++.+++++++++| ++++||...+..| |
T Consensus 352 G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 352 GPAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp SCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCCccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 67999999999999999998 8999986421111 9
Q ss_pred HHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC--CCCCCCCCCCCCCCCC-ccChHHHHHHHHHh
Q psy15158 598 VDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT--DVAAPFGGFKQSGFGK-DLDINKAMYFVDKI 674 (709)
Q Consensus 598 ldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~--~~~~PFGG~k~SG~G~-~~G~~~~~~ftr~~ 674 (709)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+ .+.+||||+|.||+|+ ++|...+++|++
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~-- 508 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE-- 508 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEE--
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCC--
Confidence 99999999999999999999999999999999999999999986544 3578999999999995 677777777776
Q ss_pred ceeEEEEe
Q psy15158 675 DSGTVFIN 682 (709)
Q Consensus 675 ~~ktV~iN 682 (709)
.|+++++
T Consensus 509 -~k~v~~~ 515 (516)
T 1uzb_A 509 -MKAVAER 515 (516)
T ss_dssp -EEEEEEE
T ss_pred -eeEEEec
Confidence 6888775
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-83 Score=771.29 Aligned_cols=456 Identities=29% Similarity=0.467 Sum_probs=412.0
Q ss_pred HhHhhccCCCCCcchhhHHHHHHhhccccc--CCCccceecCeEeeCCCCCeeeeecCCC-CCeEEEEeCCChhhHHHHH
Q psy15158 218 IKVIEVSRQGDVSNQLNHESIKLNVNKMDV--SFPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAA 294 (709)
Q Consensus 218 ~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~--~~~~~~~I~G~~v~s~~~~~~~v~nP~t-ge~i~~v~~a~~~dv~~Av 294 (709)
.+.++|+.|.|+..+...+.+..++..... .+..+++|||+|+.+ +.+++++||+| ++++++++.++.+++++|+
T Consensus 497 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av 574 (1026)
T 4f9i_A 497 LPPFNNEAMVDFTRADHRAAFPKHIAQVRTQLGKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAI 574 (1026)
T ss_dssp SCCCCCCCCCCTTSHHHHHHHHHHHHHHHTTCCEEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccccccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHH
Confidence 345789999999887776666666554332 234568999999864 57899999998 8899999999999999999
Q ss_pred HHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCcccc
Q psy15158 295 LAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIP 374 (709)
Q Consensus 295 ~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p 374 (709)
++|++||+ .|+.+|..+|+++|+++|++|++++++|+.++++|+|||+.++.. |+.+++++|+||+.+++++.+...+
T Consensus 575 ~aA~~A~~-~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~ 652 (1026)
T 4f9i_A 575 AAAKAAFP-AWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRV 652 (1026)
T ss_dssp HHHHHHHH-HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999998 999999999999999999999999999999999999999999985 9999999999999999988765433
Q ss_pred ccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEe
Q psy15158 375 IAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINIL 454 (709)
Q Consensus 375 ~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv 454 (709)
.. ..+..+++.++|+|||++|+|||||++++++++++||++||+||+|||+.||+++..+++++++||+|+|++|+|
T Consensus 653 ~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV 729 (1026)
T 4f9i_A 653 GH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFT 729 (1026)
T ss_dssp CC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEEC
T ss_pred cC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEE
Confidence 21 234567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh-----cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhc
Q psy15158 455 PGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE-----SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529 (709)
Q Consensus 455 ~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~-----~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~ 529 (709)
+|++.+++++|+.||+|++|+||||+++|+.|++.++. +++||+++|+|||||+||++|||++.|++.++.|+|.
T Consensus 730 ~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~ 809 (1026)
T 4f9i_A 730 PGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFG 809 (1026)
T ss_dssp CCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHG
T ss_pred ecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999873 3689999999999999999999999999999999999
Q ss_pred cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC
Q psy15158 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR 594 (709)
Q Consensus 530 ~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~ 594 (709)
|+||+|+|++|+|||++++|+|+++|+++++++ ++..+.+++.++|+.++++| ++++||...+.
T Consensus 810 ~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~ 888 (1026)
T 4f9i_A 810 FQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAG 888 (1026)
T ss_dssp GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSS
T ss_pred CCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCC
Confidence 999999999999999999999999999999886 78999999999999999998 99998864321
Q ss_pred CC---------------------------------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCC
Q psy15158 595 PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY 641 (709)
Q Consensus 595 ~g---------------------------------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~ 641 (709)
.| |+||||+++|+++||||++|||+|.+++.++++++++|+||||++
T Consensus 889 ~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~ 968 (1026)
T 4f9i_A 889 EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRN 968 (1026)
T ss_dssp SSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSC
T ss_pred CCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCC
Confidence 11 999999999999999999999999999999999999999999998
Q ss_pred CCCC--CCCCCCCCCCCCCCCc-cChHHHHHHHHHhceeEEEEecc
Q psy15158 642 NKTD--VAAPFGGFKQSGFGKD-LDINKAMYFVDKIDSGTVFINTY 684 (709)
Q Consensus 642 ~~~~--~~~PFGG~k~SG~G~~-~G~~~~~~ftr~~~~ktV~iN~~ 684 (709)
+++. ..+||||+|.||+|++ +|+.++.+|++ .|+|+++..
T Consensus 969 ~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~---~k~v~~~~~ 1011 (1026)
T 4f9i_A 969 NTGALVERQPFGGARMSGVGTKAGGPDYLLHFMD---PRVVTENTM 1011 (1026)
T ss_dssp SCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEE---EEEEEEECC
T ss_pred CCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhce---EEEEEEecc
Confidence 7765 3689999999999965 56666666666 799999874
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-83 Score=723.54 Aligned_cols=421 Identities=33% Similarity=0.550 Sum_probs=391.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC-RWREVSAKERSSLLRKWYNLMIQNKDD 89 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999754 6899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+.+++++.++..+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 90 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (487)
T 2w8n_A 90 LARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTP---AKDRRALVLKQPIGVAAVITPWNFPSAMITR 165 (487)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCS---CTTCEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccC---CCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 999999999999999985 999999999999999988776654432 1234578899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEec---CCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILP---GTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~---g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+ |++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 245 (487)
T 2w8n_A 166 KVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 245 (487)
T ss_dssp HHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 87788999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHh-h----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-M---- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~-l---- 562 (709)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|++++++ +
T Consensus 246 ~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~ 324 (487)
T 2w8n_A 246 HHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGN 324 (487)
T ss_dssp HHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCC
Confidence 99884 89999999999999999999999999999999999999999999999999999999999999999988 4
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-C-----C------------------C---------CH
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-R-----P------------------G---------DV 598 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~-----~------------------g---------dl 598 (709)
++..+++++.+++++++++|+++++||...+ . | | |+
T Consensus 325 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 404 (487)
T 2w8n_A 325 GFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTE 404 (487)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCH
T ss_pred cccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCH
Confidence 6899999999999999999999999875310 0 1 0 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++ .|+
T Consensus 405 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~---~k~ 481 (487)
T 2w8n_A 405 EEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLE---LKY 481 (487)
T ss_dssp HHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEE---EEE
T ss_pred HHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcC---ccE
Confidence 99999999999999999999999999999999999999999987777789999999999999999998888877 688
Q ss_pred EEEe
Q psy15158 679 VFIN 682 (709)
Q Consensus 679 V~iN 682 (709)
++++
T Consensus 482 v~~~ 485 (487)
T 2w8n_A 482 VCYG 485 (487)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8765
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-83 Score=721.27 Aligned_cols=408 Identities=27% Similarity=0.440 Sum_probs=384.3
Q ss_pred eeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHH
Q psy15158 267 SMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLA 346 (709)
Q Consensus 267 ~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a 346 (709)
+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+|||+.++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 83 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK-KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES 83 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH-HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 489999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeC
Q psy15158 347 LKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426 (709)
Q Consensus 347 ~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKP 426 (709)
. .|+..+++.++||+..++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++++|||++||+||+||
T Consensus 84 ~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 158 (484)
T 3ros_A 84 K-EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKH 158 (484)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEEC
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 5999999999999999998887654432 2356789999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc
Q psy15158 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506 (709)
Q Consensus 427 s~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn 506 (709)
|+.+|+++.++++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+.+|+.|++.+++ ++||+++||||||
T Consensus 159 s~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~ 236 (484)
T 3ros_A 159 AHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGND 236 (484)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCC
T ss_pred CCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCC
Confidence 9999999999999999999999999999998888888 9999999999999999999999999985 8999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHH
Q psy15158 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKL 571 (709)
Q Consensus 507 p~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i 571 (709)
|+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++ ++..+.+++
T Consensus 237 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv 316 (484)
T 3ros_A 237 AFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKL 316 (484)
T ss_dssp EEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred cceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999875 788999999
Q ss_pred HHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEEEc
Q psy15158 572 IDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618 (709)
Q Consensus 572 ~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V~T 618 (709)
.++|++++++|+++++||...+..| |+||||+++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 396 (484)
T 3ros_A 317 EAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIG 396 (484)
T ss_dssp HHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEEC
T ss_pred HHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEEC
Confidence 9999999999999999986422111 9999999999999999999999
Q ss_pred cchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccC
Q psy15158 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYN 685 (709)
Q Consensus 619 ~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~ 685 (709)
+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+++..|++ .|+|+++...
T Consensus 397 ~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~---~K~v~~~~~~ 460 (484)
T 3ros_A 397 SDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN---EHLVIDVTKN 460 (484)
T ss_dssp SCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCE---EEEEEECGGG
T ss_pred CCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhhe---eEEEEECCCC
Confidence 999999999999999999999987777889999999999999999999988887 7999988643
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-83 Score=720.42 Aligned_cols=415 Identities=37% Similarity=0.596 Sum_probs=380.1
Q ss_pred ceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHH
Q psy15158 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332 (709)
Q Consensus 253 ~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa 332 (709)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|+
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela 77 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE-VMKNLPITKRYNILMNIAKQIKEKKEELA 77 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH-HHHTCCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 45 99999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHH
Q psy15158 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKM 412 (709)
Q Consensus 333 ~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~i 412 (709)
+++++|+|||..++.. |+..+++.++||+.+++++.++..+.. +...++.++|+|||++|+|||||+.+.++++
T Consensus 78 ~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 151 (486)
T 3pqa_A 78 KILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-----DRLIFTRREPVGIVGAITPFNFPLNLSAHKI 151 (486)
T ss_dssp HHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-----TEEEEEEEEECSEEEEEECSSSHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-----CceeEEEEccccEEEEECCCchHHHHHHHHH
Confidence 9999999999999985 999999999999999988776554421 3467899999999999999999999999999
Q ss_pred HHHHHcCCEEEeeCCCCchHHHHHHHHHHHHc----CCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 413 APCLAAGNTVVMKPSEVSPLTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 413 apALaaGNtVVlKPs~~tplta~~l~ell~eA----GlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+|||++||+||+|||+.+|+++.++++++.++ |+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++
T Consensus 152 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~ 231 (486)
T 3pqa_A 152 APAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK 231 (486)
T ss_dssp HHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999988889999999999999999999999999999
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 232 ~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 308 (486)
T 3pqa_A 232 KAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPL 308 (486)
T ss_dssp HCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCC
Confidence 875 89999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccC-----------CC------C---C---------CHHHHHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL-----------DR------P---G---------DVDAVIKR 604 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-----------~~------~---g---------dldeaI~~ 604 (709)
++..+++++.+++++++.+|+++++||... +. + | | ||||++
T Consensus 309 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~ 387 (486)
T 3pqa_A 309 DEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDI 387 (486)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHH
T ss_pred cCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHH
Confidence 688999999999999999999999998521 00 0 1 7 999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
+|+++|||+++|||+|.++++++++++++|+|+||++... ...+||||+|+||+|+++|.++++.|++ .|+|+++.
T Consensus 388 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~---~k~v~~~~ 464 (486)
T 3pqa_A 388 ANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSN---IKTIIISK 464 (486)
T ss_dssp HTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEE---EEEEEEEC
T ss_pred HhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhc---eEEEEEcC
Confidence 9999999999999999999999999999999999998653 2478999999999999999999998888 79998886
Q ss_pred c
Q psy15158 684 Y 684 (709)
Q Consensus 684 ~ 684 (709)
.
T Consensus 465 ~ 465 (486)
T 3pqa_A 465 A 465 (486)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-82 Score=720.41 Aligned_cols=420 Identities=25% Similarity=0.481 Sum_probs=386.3
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
++.||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++
T Consensus 24 ~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 24 NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK-IWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999994 567899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++. .|+..+++.++||+++++++.+...+.. .+ +...+++++|+|||++|+|||||+.+.++
T Consensus 101 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSE--RS-GHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCS--ST-TEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccc--CC-CceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999996 5999999999999999887776544322 12 23457789999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHH----cCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR----AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~e----AGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I 486 (709)
+++|||++||+||+|||+.+|+++.++++++.+ +|+|+|++|+|+| +.+++++|+.||+|++|+||||+++|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999999888764 6999999999999 78899999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----
Q psy15158 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---- 562 (709)
Q Consensus 487 ~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---- 562 (709)
++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999885 899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -----------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CH
Q psy15158 563 -----------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DV 598 (709)
Q Consensus 563 -----------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dl 598 (709)
++..+.+++.+++++++++|+++++||...+..| |+
T Consensus 335 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 5799999999999999999999999986421111 99
Q ss_pred HHHHHHHhcCCCCCeEEEEccchHHHHHHH--HhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCCccChHHHHHHHHHhc
Q psy15158 599 DAVIKRANSTEYGLASGIFTSDINKAMYFV--DKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGKDLDINKAMYFVDKID 675 (709)
Q Consensus 599 deaI~~~N~t~yGLta~V~T~d~~~a~~va--~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~ 675 (709)
||||+++|+++|||+++|||+|.+++++++ +++++|+|+||+.... .+.+||||+|.||+|+++|.+++..|++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~--- 491 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR--- 491 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEE---
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhc---
Confidence 999999999999999999999999999999 7799999999987553 3578999999999999999998888877
Q ss_pred eeEEEEe
Q psy15158 676 SGTVFIN 682 (709)
Q Consensus 676 ~ktV~iN 682 (709)
.|+++++
T Consensus 492 ~k~v~~~ 498 (500)
T 2j6l_A 492 RSTCTIN 498 (500)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 7888876
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-82 Score=717.56 Aligned_cols=419 Identities=29% Similarity=0.472 Sum_probs=386.6
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||||+|+.+.+ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|.++|
T Consensus 6 ~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 6 KNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-AWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4799999997643 899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCC---Cce-eeeecccCEEEEECCCCchHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNS---NFT-FTKREPIGVCGLITPWNYPLMM 407 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~---~~~-~~~~~P~GVv~~I~PwNfPl~~ 407 (709)
++++++|+|||+.++.. |+..+++.++||+.+++++.++..+.. .+.. ... ++.++|+|||++|+|||||+.+
T Consensus 83 a~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 83 GAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCC--CCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 99999999999999974 999999999999999888766544332 1210 345 8899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHH
Q psy15158 408 LSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIM 487 (709)
Q Consensus 408 ~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~ 487 (709)
.+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-----
Q psy15158 488 KSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----- 562 (709)
Q Consensus 488 ~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----- 562 (709)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9875 89999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCcc----C------C-CC----------C---------CHHHHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKR----L------D-RP----------G---------DVDAVIK 603 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~----~------~-~~----------g---------dldeaI~ 603 (709)
++..+.+++.+++++++++|+++++||.. . + .+ | |+||||+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~ 396 (475)
T 1euh_A 317 EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396 (475)
T ss_dssp GGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHH
T ss_pred cccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHH
Confidence 67999999999999999999999998742 0 0 01 1 9999999
Q ss_pred HHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcC-CCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINT-YNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 604 ~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~-~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
++|+++|||+++|||+|.++++++++++++|+|+||+ +....+.+||||+|.||+|+++|.+++++|++ .|+++++
T Consensus 397 ~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~---~k~v~~~ 473 (475)
T 1euh_A 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTT---VKSVVFD 473 (475)
T ss_dssp HHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEE---EEEEEEE
T ss_pred HHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCC---eeEEEEe
Confidence 9999999999999999999999999999999999999 66556789999999999999999999988877 6888765
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-83 Score=719.09 Aligned_cols=416 Identities=37% Similarity=0.585 Sum_probs=366.1
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL-EFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4589999999987788999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++...|+..+++.++||++.+++..+.... ...++.++|+|||++|+|||||+.+.++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~--------~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR--------GDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEEE--------TTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccCC--------ccceEEecCceEEEEECCCcchHHHHHH
Confidence 99999999999999995469999999999999998887654311 2467899999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999988
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 239 a~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 317 (478)
T 3ty7_A 239 AK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRED 317 (478)
T ss_dssp TT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred Hh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 74 899999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccC-C--CCC---------------------------------CHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL-D--RPG---------------------------------DVD 599 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~--~~g---------------------------------dld 599 (709)
++..+.+++.+++++++++|+++++||... + ..| |+|
T Consensus 318 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 397 (478)
T 3ty7_A 318 GTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLD 397 (478)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHH
Confidence 789999999999999999999999998321 1 011 999
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+ ....+.+||||+|.||+|+++|.+++..|++ .|+|
T Consensus 398 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~---~k~v 473 (478)
T 3ty7_A 398 EAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLE---VKSI 473 (478)
T ss_dssp HHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEE---EEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcC---eEEE
Confidence 99999999999999999999999999999999999999999 5556678999999999999999998888877 6777
Q ss_pred E
Q psy15158 680 F 680 (709)
Q Consensus 680 ~ 680 (709)
+
T Consensus 474 ~ 474 (478)
T 3ty7_A 474 A 474 (478)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-82 Score=716.13 Aligned_cols=422 Identities=27% Similarity=0.410 Sum_probs=388.5
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
.++||||+|+.+. .+++++||+||+++++++.++.+|+++|+++|++||+..|+.+|.++|.++|++++++|++|+++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3479999999763 68999999999999999999999999999999999931699999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCC--CCceeeeecccCEEEEECCCCchHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPN--SNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~--~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
|++++++|+|||+.++. .|+..+++.++||+.+++++.++..+... .+. +...++.++|+|||++|+|||||+++.
T Consensus 97 la~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDW-TYDTLETEGLVRREPLGVVAAITPFNYPLFDA 174 (501)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTT-SSTTTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccc-cCCCcCceEEEEEeeccEEEEECCCccHHHHH
Confidence 99999999999999998 59999999999999999888766544311 012 235688999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++ +++++|+.||+|++|+||||+++|+.|++
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 89999999999999999999999999999
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++
T Consensus 254 ~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 330 (501)
T 1uxt_A 254 VGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330 (501)
T ss_dssp HHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred hcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCcc
Confidence 876 89999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCcc-----C------C-C---CC-------------------CHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKR-----L------D-R---PG-------------------DVD 599 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-----~------~-~---~g-------------------dld 599 (709)
++..+.+++.+++++++++|+++++||.. . + . +. |+|
T Consensus 331 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~d 410 (501)
T 1uxt_A 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLD 410 (501)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHH
Confidence 67999999999999999999999998642 0 1 1 21 999
Q ss_pred HHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCC-CCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeE
Q psy15158 600 AVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTY-NKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 600 eaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~-~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~kt 678 (709)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+++.+|++ .|+
T Consensus 411 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~---~k~ 487 (501)
T 1uxt_A 411 QAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTA---YKT 487 (501)
T ss_dssp HHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEE---EEE
T ss_pred HHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCc---eeE
Confidence 999999999999999999999999999999999999999997 5556789999999999999999999998888 799
Q ss_pred EEEec
Q psy15158 679 VFINT 683 (709)
Q Consensus 679 V~iN~ 683 (709)
++++.
T Consensus 488 v~~~~ 492 (501)
T 1uxt_A 488 IVFNY 492 (501)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98875
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-82 Score=713.87 Aligned_cols=421 Identities=32% Similarity=0.538 Sum_probs=388.1
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|
T Consensus 7 ~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 7 KNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK-TWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999876678899999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++. .|+..+++.++||+...+.+.++..+.. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 86 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 86 AHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASI---ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEE---ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccC---CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999987 4999999999999988777776543321 12245688999999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+ .+++++|+.||+|++|+||||+++|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGA-HDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCS-HHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECC-HHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999994 578999999999999999999999999999988
Q ss_pred hcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcE-EEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR-IFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 492 ~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~r-l~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
+ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|+|++| ||||++ +|+|+++|+++++++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 5 89999999999999999999999999999999999999999999999 999999 999999999999876
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-CCC---------------------------------CHHHH
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-RPG---------------------------------DVDAV 601 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~~g---------------------------------dldea 601 (709)
++..+.+++.+++++++++|+++++||.... ..| |+|||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 5799999999999999999999999986311 001 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCC--CccChHHHHHHHHHhceeE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFG--KDLDINKAMYFVDKIDSGT 678 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G--~~~G~~~~~~ftr~~~~kt 678 (709)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... ...+||||+|.||+| +++|.++++.|++ .|+
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~---~k~ 475 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTR---KKV 475 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEE---EEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhc---eEE
Confidence 9999999999999999999999999999999999999986443 357899999999999 8999999988877 789
Q ss_pred EEEec
Q psy15158 679 VFINT 683 (709)
Q Consensus 679 V~iN~ 683 (709)
++.+.
T Consensus 476 v~~~~ 480 (486)
T 1t90_A 476 VTARY 480 (486)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 88764
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-81 Score=700.27 Aligned_cols=408 Identities=29% Similarity=0.474 Sum_probs=381.1
Q ss_pred CCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHH
Q psy15158 265 GSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT 344 (709)
Q Consensus 265 ~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~ 344 (709)
..+++++||+||+++++++.++.+++++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+|||+.
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK-KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45789999999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEe
Q psy15158 345 LALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424 (709)
Q Consensus 345 ~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVl 424 (709)
++.. |+..+++.++||+..++++.+.. +.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 85 ~a~~-ev~~~~~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QARA-EVTKSAALCDWYAEHGPAMLNPE-PTL---VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHTSCE-ECS---SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHH-HHHHHHHHHHHHHHhHHHhcCCc-ccC---CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 9985 99999999999999998887654 221 123457889999999999999999999999999999999999999
Q ss_pred eCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCC
Q psy15158 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504 (709)
Q Consensus 425 KPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGG 504 (709)
|||+.+|+++.++++++.++|+|+|++|+|+|+ .+.++.|+.||+|+.|+||||+++|+.|++.+++ +++|+++|+||
T Consensus 160 Kps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGG 237 (462)
T 3etf_A 160 KHAPNVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGG 237 (462)
T ss_dssp ECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred ECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCC
Confidence 999999999999999999999999999999995 5788999999999999999999999999999885 78999999999
Q ss_pred cccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHH
Q psy15158 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLD 569 (709)
Q Consensus 505 knp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~ 569 (709)
|||+||++|||++.|++.++.++|.|+||.|+|++|||||++++|+|+++|+++++++ ++..+.+
T Consensus 238 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 317 (462)
T 3etf_A 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRD 317 (462)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHH
T ss_pred CCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999875 6889999
Q ss_pred HHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHHHHHHhcCCCCCeEEE
Q psy15158 570 KLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAVIKRANSTEYGLASGI 616 (709)
Q Consensus 570 ~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldeaI~~~N~t~yGLta~V 616 (709)
++.+++++++++|+++++||...+..| |+||||+++|+++|||+++|
T Consensus 318 ~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v 397 (462)
T 3etf_A 318 ELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATI 397 (462)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEE
Confidence 999999999999999999997432111 99999999999999999999
Q ss_pred EccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 617 ~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
||+|.++++++++++++|+|+||++......+||||+|.||+|+++|.+++++|++ .|+|+++.
T Consensus 398 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~---~k~v~~~r 461 (462)
T 3etf_A 398 FTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN---VQTVWKNR 461 (462)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE---EEEEEECC
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhc---eeEEEEec
Confidence 99999999999999999999999988777789999999999999999999988887 78888764
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-79 Score=691.28 Aligned_cols=400 Identities=28% Similarity=0.442 Sum_probs=369.3
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEEL 331 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eL 331 (709)
++||||+|+.+. +.+++++||+||+++++++.++.+++++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP-AWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999864 46789999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHH
Q psy15158 332 ATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411 (709)
Q Consensus 332 a~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~ 411 (709)
++++++|+|||+.++.. |+..+++.++|++..++++.+...+.. + +...+++++|+|||++|+|||||+.+.+++
T Consensus 85 a~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (490)
T 3ju8_A 85 ARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPL---A-DATAVLRHKPHGVVAVFGPYNFPGHLPNGH 159 (490)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEE---T-TEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccC---C-CCeeeEEECCCCEEEEECCCcchHHHHHHH
Confidence 99999999999999984 999999999999999888877654321 1 234567799999999999999999999999
Q ss_pred HHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHH
Q psy15158 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491 (709)
Q Consensus 412 iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa 491 (709)
++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+++++|+.||+|++|+||||+++|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 238 (490)
T 3ju8_A 160 IVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG 238 (490)
T ss_dssp HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5789999999999999999999999999999988
Q ss_pred hcCCCcE-EEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCcc-HHHHHHHHHHHHHhh-------
Q psy15158 492 ESNLKKV-SLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNI-YDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 492 ~~~~k~v-~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi-~d~fl~~L~~~~~~l------- 562 (709)
+ +++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|+|++|+|||+++ +|+|+++|+++++++
T Consensus 239 ~-~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~ 317 (490)
T 3ju8_A 239 G-QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDE 317 (490)
T ss_dssp T-CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTC
T ss_pred c-cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCC
Confidence 5 78998 8999999999999999999999999999999999999999999999996 999999999998765
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCC-----------------------C---------CHHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP-----------------------G---------DVDAV 601 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~-----------------------g---------dldea 601 (709)
++..+.+++.+++++++++|+++++||...+.. | |+|||
T Consensus 318 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eA 397 (490)
T 3ju8_A 318 QPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAA 397 (490)
T ss_dssp SSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHH
T ss_pred CCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHH
Confidence 567899999999999999999999998532111 1 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC-CCCCCCCCCCCCCCCC
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT-DVAAPFGGFKQSGFGK 660 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~-~~~~PFGG~k~SG~G~ 660 (709)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... ...+||||+|.||++.
T Consensus 398 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~~ 457 (490)
T 3ju8_A 398 IREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457 (490)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSSC
T ss_pred HHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchhH
Confidence 9999999999999999999999999999999999999997654 4578999999999863
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-79 Score=691.14 Aligned_cols=411 Identities=23% Similarity=0.358 Sum_probs=374.1
Q ss_pred CCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCh
Q psy15158 263 VGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAV 342 (709)
Q Consensus 263 ~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~ 342 (709)
.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||+
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 81 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS-RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRL 81 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCS
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3567999999999999999999999999999999999998 999999999999999999999999999999999999998
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEE
Q psy15158 343 YTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422 (709)
Q Consensus 343 ~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtV 422 (709)
.... .|+...++.++||+..+.++........ . .++......++|+|||++|+|||||+++.+++++|||++||+|
T Consensus 82 ~~~~--~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~V 157 (474)
T 4h7n_A 82 SITV--LEIDSFLASIDRWCGLAPELLQTSAKNT-S-IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAV 157 (474)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHHHCCEEEEC-S-STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEE
T ss_pred HHHH--HHHHHHHHHHHHHHhhhhhcccccccCC-C-CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCce
Confidence 6543 3899999999999998887765432211 1 1223456778999999999999999999999999999999999
Q ss_pred EeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcC
Q psy15158 423 VMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLEL 502 (709)
Q Consensus 423 VlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lEl 502 (709)
|+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.+..|+.| ++.|+||||+.+|+.|++.+++ +++|+++||
T Consensus 158 VlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~-~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lEl 233 (474)
T 4h7n_A 158 VVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGG-GETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLEL 233 (474)
T ss_dssp EEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCC-HHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEEC
T ss_pred eecccccCchHHHHHHhhhhhhcccccceeecccc-chhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccC
Confidence 99999999999999999999999999999999994 6788899977 7899999999999999999885 789999999
Q ss_pred CCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHH
Q psy15158 503 GGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAH 567 (709)
Q Consensus 503 GGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~ 567 (709)
|||||+||++|||++.|++.++.++|.|+||.|+|++|+|||++++|+|+++|+++++++ ++..+
T Consensus 234 GGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 313 (474)
T 4h7n_A 234 GGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQ 313 (474)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHH
T ss_pred CCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHH
Confidence 999999999999999999999999999999999999999999999999999999999886 68999
Q ss_pred HHHHHHHHHHHHhcCCEEEECCccCCCC-C---------------------------------CHHHHHHHHhcCCCCCe
Q psy15158 568 LDKLIDYCEKAKSEGARLLIGGKRLDRP-G---------------------------------DVDAVIKRANSTEYGLA 613 (709)
Q Consensus 568 ~~~i~~~i~~a~~~Ga~vl~GG~~~~~~-g---------------------------------dldeaI~~~N~t~yGLt 613 (709)
.+++.+++++++++|+++++||...+.. | |+||||+++|+++|||+
T Consensus 314 ~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~ 393 (474)
T 4h7n_A 314 AGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLS 393 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSE
T ss_pred HHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCe
Confidence 9999999999999999999998643210 1 99999999999999999
Q ss_pred EEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCC-CccChHHHHHHHHHhceeEEEEeccC
Q psy15158 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFG-KDLDINKAMYFVDKIDSGTVFINTYN 685 (709)
Q Consensus 614 a~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G-~~~G~~~~~~ftr~~~~ktV~iN~~~ 685 (709)
++|||+|.++++++++++++|+|+||+...+. ..+||||+|.||+| ++.|.+++.+|++ .|+|++++..
T Consensus 394 a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~---~k~v~~~~~~ 465 (474)
T 4h7n_A 394 AAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLR---KQAFLIKTNS 465 (474)
T ss_dssp EEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEE---EEEEEEECSS
T ss_pred EEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCe---EEEEEECCCC
Confidence 99999999999999999999999999977654 36899999999998 7889998888887 7999998754
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-77 Score=673.06 Aligned_cols=404 Identities=25% Similarity=0.370 Sum_probs=353.6
Q ss_pred CeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHH
Q psy15158 266 SSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTL 345 (709)
Q Consensus 266 ~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~ 345 (709)
..+++.||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||+.+
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA-TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH-TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 4578899999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhhCcc-ccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEe
Q psy15158 346 ALKTHVGMSIDTWKYFAGWCDKILGST-IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424 (709)
Q Consensus 346 a~~~ev~~aid~lr~~a~~~~~~~g~~-~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVl 424 (709)
+...|+..+++.++|++..+++..+.. .+.... ..+...++.++|+|||++|+|||||+.+.+++++|||++||+||+
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDI-IAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGG-GCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-CCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 975599999999999999988776532 211111 123457889999999999999999999999999999999999999
Q ss_pred eCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCC
Q psy15158 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGG 504 (709)
Q Consensus 425 KPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGG 504 (709)
|||+.+|+++.++++++.++ +|+|++|+|+| +.++++.|+. ++|++|+||||+++|+.|++.+++ +++|+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 5788999998 789999999999999999999885 89999999999
Q ss_pred cccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----------hcHHHHHHHHHH
Q psy15158 505 KSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------NHKAHLDKLIDY 574 (709)
Q Consensus 505 knp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----------~~~~~~~~i~~~ 574 (709)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++ ++..+.+++.++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~ 319 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSL 319 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876 789999999999
Q ss_pred HHHHHhcCCEEEECCccCC-------------CC----------C---------CHHHHHHHHhc-CCCCCeEEEEccch
Q psy15158 575 CEKAKSEGARLLIGGKRLD-------------RP----------G---------DVDAVIKRANS-TEYGLASGIFTSDI 621 (709)
Q Consensus 575 i~~a~~~Ga~vl~GG~~~~-------------~~----------g---------dldeaI~~~N~-t~yGLta~V~T~d~ 621 (709)
++++. +++++||.... .+ | |+||||+++|+ ++|||+++|||+|.
T Consensus 320 i~~a~---~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~ 396 (457)
T 3lns_A 320 LEATQ---GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDM 396 (457)
T ss_dssp HHHCC---SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCH
T ss_pred HHhcC---CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCH
Confidence 99853 59999986311 00 0 99999999999 99999999999999
Q ss_pred HHHHHHHHhcCeeeEEEcCCCC--CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 622 NKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 622 ~~a~~va~~l~aG~V~VN~~~~--~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++..|++ .|+|++
T Consensus 397 ~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~---~k~v~~ 455 (457)
T 3lns_A 397 DVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTH---KKSVRI 455 (457)
T ss_dssp HHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEE---EEEEEE
T ss_pred HHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhC---eeEEEe
Confidence 9999999999999999999753 35678999999999999999999998887 688765
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-77 Score=679.66 Aligned_cols=434 Identities=21% Similarity=0.263 Sum_probs=364.2
Q ss_pred ccCCCCCcchhhHHHHHHhhcccccCCCccceecCeEeeCCCCCeeeeecCCCCCeEE-EEeCCChhhHHHHHHHHHHhc
Q psy15158 223 VSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTIC-SVQMANSDDVDIAALAAEKAF 301 (709)
Q Consensus 223 ~s~G~d~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~-~v~~a~~~dv~~Av~aA~~A~ 301 (709)
.|.|.|+..+..+ + +.++. ..++.++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||
T Consensus 7 ~~~~~~~~~~~~~--~-~~~~~--~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~ 76 (528)
T 3v4c_A 7 HSSGVDLGTENLY--F-QSMMI--FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAF 76 (528)
T ss_dssp -------------------CCS--CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHH
T ss_pred cccccccCcccHH--H-HHhhh--cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHH
Confidence 3556666655433 2 12222 234456899999997642 88999999998 999999999999999999999
Q ss_pred hhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhh--hCccccc--cC
Q psy15158 302 EGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI--LGSTIPI--AH 377 (709)
Q Consensus 302 ~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~--~g~~~p~--~~ 377 (709)
+ .|+.+|..+|.++|++++++|++|+++|++++++|+|||+.++.. |+..+++.++||++.+++. .+...+. +.
T Consensus 77 ~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~ 154 (528)
T 3v4c_A 77 W-TYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPE 154 (528)
T ss_dssp H-HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTT
T ss_pred H-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhcccccccccccccc
Confidence 8 999999999999999999999999999999999999999999885 9999999999999998873 3322211 00
Q ss_pred C-CCCCCceeeeecccCEEEEECCCCchHHHHH--HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHH----HHcCCCCCc
Q psy15158 378 A-RPNSNFTFTKREPIGVCGLITPWNYPLMMLS--WKMAPCLAAGNTVVMKPSEVSPLTALKLAELS----VRAGFPKGV 450 (709)
Q Consensus 378 ~-~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~--~~iapALaaGNtVVlKPs~~tplta~~l~ell----~eAGlP~gv 450 (709)
. ..++...++.++|+|||++|+|||||+.+.+ ++++|||++||+||+|||+.+|+++..+++++ .++|+|+|+
T Consensus 155 ~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gv 234 (528)
T 3v4c_A 155 RQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGV 234 (528)
T ss_dssp CSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred ccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCe
Confidence 0 0122346789999999999999999999854 99999999999999999999999999999875 468999999
Q ss_pred EEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCC--CcEEEcCCCcccEEEcCCC---CHHHHHHHHHh
Q psy15158 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNL--KKVSLELGGKSPLVIFDDY---NLDKAVRMSMG 525 (709)
Q Consensus 451 v~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~--k~v~lElGGknp~IV~~dA---Dle~Aa~~iv~ 525 (709)
+|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|| |++.|++.+++
T Consensus 235 v~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~ 313 (528)
T 3v4c_A 235 FSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAG 313 (528)
T ss_dssp EEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHH
Confidence 999999888999999999999999999999999999999885 77 8999999999999999999 88999999999
Q ss_pred hhhccCCCcccCCcEEEEeCc-cHHHHHHHHHHHHHhh---------hcHHHHHHHHHHHHHHHhcCCEEEECCccC---
Q psy15158 526 GVFFNKGENCISAGRIFVDSN-IYDAFLEKVVTEVKKM---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL--- 592 (709)
Q Consensus 526 saf~~~GQ~C~A~~rl~V~es-i~d~fl~~L~~~~~~l---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~--- 592 (709)
++|.|+||.|+|++|||||++ ++|+|+++|+++++++ ++..+.+++.++++ .+|+++++||...
T Consensus 314 ~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~~g~~ 390 (528)
T 3v4c_A 314 SLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT---RNAVKPLLATESSGRD 390 (528)
T ss_dssp HHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCCCTTE
T ss_pred HHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCcCCce
Confidence 999999999999999999997 9999999999999886 34444444554442 3789999998520
Q ss_pred ----------C----C----C---C---------CHHHHHHHHhcCCCCCeEEEEcc--chHHHHHHHHhcC--eeeEEE
Q psy15158 593 ----------D----R----P---G---------DVDAVIKRANSTEYGLASGIFTS--DINKAMYFVDKID--SGTVFI 638 (709)
Q Consensus 593 ----------~----~----~---g---------dldeaI~~~N~t~yGLta~V~T~--d~~~a~~va~~l~--aG~V~V 638 (709)
+ . + | |+||||+++|+++|||+++|||+ |.+++++++++++ +|+|||
T Consensus 391 ~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~v 470 (528)
T 3v4c_A 391 ASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLV 470 (528)
T ss_dssp ECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEE
T ss_pred eccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 0 0 0 1 89999999999999999999999 8899999999998 999999
Q ss_pred cCCCCC---CCCCCCCC-CCCCCCCCcc--ChHHHHHHHH
Q psy15158 639 NTYNKT---DVAAPFGG-FKQSGFGKDL--DINKAMYFVD 672 (709)
Q Consensus 639 N~~~~~---~~~~PFGG-~k~SG~G~~~--G~~~~~~ftr 672 (709)
|+++++ ...+|||| +|.||+|+++ |.+++.+|++
T Consensus 471 N~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~ 510 (528)
T 3v4c_A 471 NGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510 (528)
T ss_dssp SSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEE
T ss_pred cCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhch
Confidence 997653 35789999 9999999975 8888887766
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-77 Score=682.95 Aligned_cols=420 Identities=17% Similarity=0.250 Sum_probs=369.6
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHh-chhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKA-FEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A-~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.+|..+|.++|++++++|++|++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA-ALRALTYAQRAARLADIVKLLQAKRG 84 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh-hhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 34799999997644 479999999999999999998 9999999999999 58 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccc-----cCCCCCCCceeeeeccc-CEEEEECCCCc
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPI-----AHARPNSNFTFTKREPI-GVCGLITPWNY 403 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~-----~~~~~~~~~~~~~~~P~-GVv~~I~PwNf 403 (709)
+|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+. +...+.....+..++|+ |||++|+||||
T Consensus 85 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~ 163 (534)
T 2y53_A 85 DYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 163 (534)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTC
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCch
Confidence 9999999999999999985 99999999999999987775422110 10112222357789997 99999999999
Q ss_pred hHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcC-CCCCcEEEecCCchhHHHHHHhC-CCccEEEEcCChH
Q psy15158 404 PLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGAVTGEAISQH-LKIRKVGFTGSTV 481 (709)
Q Consensus 404 Pl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAG-lP~gvv~vv~g~g~~~g~~L~~~-p~v~~V~FTGSt~ 481 (709)
|+++.+++++|||++||+||+|||+.||+++..+++++.+|| +|+|++|+|+|++.+ +..+ +++++|+||||+.
T Consensus 164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS~~ 239 (534)
T 2y53_A 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGSAD 239 (534)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESCHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECCHH
Confidence 999999999999999999999999999999999999999999 799999999997654 3333 6799999999999
Q ss_pred HHHHHHHHHH-hcCCCcEEEcCCCcccEEEcCCC-----CHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHH
Q psy15158 482 TGMKIMKSAA-ESNLKKVSLELGGKSPLVIFDDY-----NLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKV 555 (709)
Q Consensus 482 ~g~~I~~~aa-~~~~k~v~lElGGknp~IV~~dA-----Dle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L 555 (709)
+|+.|++.++ .+++||+++|||||||+||++|| |++.|++.++.++|.|+||.|+|++|||||++++|+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998874 35899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccC-----C-CCC------------------
Q psy15158 556 VTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRL-----D-RPG------------------ 596 (709)
Q Consensus 556 ~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-----~-~~g------------------ 596 (709)
+++++++ +++.+++++.++|+++ .+|+++++||... + ..|
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 9999876 6899999999999999 6899999988521 0 001
Q ss_pred --------------------CH-----HHHHHHHhcCCCCCeEEEEccchHHHHHHHHhc--CeeeEEEcCCCC------
Q psy15158 597 --------------------DV-----DAVIKRANSTEYGLASGIFTSDINKAMYFVDKI--DSGTVFINTYNK------ 643 (709)
Q Consensus 597 --------------------dl-----deaI~~~N~t~yGLta~V~T~d~~~a~~va~~l--~aG~V~VN~~~~------ 643 (709)
|+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||++..
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~ 478 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCC
T ss_pred HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccc
Confidence 45 999999999999999999999999999999999 899999998642
Q ss_pred ---CCCCCCCCCCCCCCCCCc-cChHHHHHHHHHhceeEEEEe
Q psy15158 644 ---TDVAAPFGGFKQSGFGKD-LDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 644 ---~~~~~PFGG~k~SG~G~~-~G~~~~~~ftr~~~~ktV~iN 682 (709)
..+.+||||+|.||+|++ .|..++.+|++ .|+++..
T Consensus 479 ~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~---~k~v~~~ 518 (534)
T 2y53_A 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHR---RSAIQAA 518 (534)
T ss_dssp SSCCCTTSEECCSGGGCSCCEESGGGGGGGGEE---EEEEEEE
T ss_pred cCCCCCCCCCCCcccCCCCCCcchHHHHHHHhh---hheeecC
Confidence 235789999999999999 57787887777 5777654
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-76 Score=710.19 Aligned_cols=430 Identities=25% Similarity=0.378 Sum_probs=387.0
Q ss_pred hhHHhHhhccCCCCCcchhhHHHHHHhhcccccCCCccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHH
Q psy15158 215 DFYIKVIEVSRQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAA 294 (709)
Q Consensus 215 ~f~~~~r~~s~G~d~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av 294 (709)
+.+.+.|+|++|.|+.++...+.+..++...... | +| ++.++.+++++|+
T Consensus 507 ~~~~~~r~n~~~~d~~~~~~~~~~~~~~~~~~~~----------~------------~p--------v~~a~~~dv~~Av 556 (1001)
T 3haz_A 507 DLFAPERRNSRGVEFGARTALDQLLTDVKAETGD----------L------------KP--------IADATPDQAHAAV 556 (1001)
T ss_dssp GTTTTTCCCCCCCCTTSHHHHHHHHHHHHHCCCC----------C------------CC--------CCCCCHHHHHHHH
T ss_pred hhcCcccCCCCCCCCCCHHHHHHHHHHHHHHhhc----------C------------CC--------cccCCHHHHHHHH
Confidence 4445679999999999999888887776543211 1 23 8999999999999
Q ss_pred HHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCcccc
Q psy15158 295 LAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIP 374 (709)
Q Consensus 295 ~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p 374 (709)
++|++||+ .|+.+|..+|+++|++++++|++|+++|+.++++|+|||+.++.. |+..++++|+||+.+++++.+...+
T Consensus 557 ~aA~~A~~-~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~~a~~a~~~~g~~~~ 634 (1001)
T 3haz_A 557 AAARAGFA-GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRYYAAQGRKLFGSETA 634 (1001)
T ss_dssp HHHHHHHH-HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred HHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHHHHhhcCcccc
Confidence 99999998 999999999999999999999999999999999999999999985 9999999999999999988775433
Q ss_pred ccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEe
Q psy15158 375 IAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINIL 454 (709)
Q Consensus 375 ~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv 454 (709)
.. .+.+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.||+++..+++++.++|+|+|++|+|
T Consensus 635 ~~--~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV 712 (1001)
T 3haz_A 635 MP--GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLV 712 (1001)
T ss_dssp CC--CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEEC
T ss_pred cc--CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEE
Confidence 22 2344667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc--CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCC
Q psy15158 455 PGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES--NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKG 532 (709)
Q Consensus 455 ~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~--~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~G 532 (709)
+|++.+ ++.|+.||+|++|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+++|++.++.|+|.|+|
T Consensus 713 ~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naG 791 (1001)
T 3haz_A 713 TGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAG 791 (1001)
T ss_dssp CCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG
T ss_pred ecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 998877 99999999999999999999999999998864 589999999999999999999999999999999999999
Q ss_pred CcccCCcEEEEeCccHHHHHHHHHHHHHhh---------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCC---
Q psy15158 533 ENCISAGRIFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR--- 594 (709)
Q Consensus 533 Q~C~A~~rl~V~esi~d~fl~~L~~~~~~l---------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~--- 594 (709)
|.|+|++|||||++++|+|+++|+++++++ ++..+.+++.++|++++++| ++ +||...+.
T Consensus 792 Q~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~~G~f 869 (1001)
T 3haz_A 792 QRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAPEGCF 869 (1001)
T ss_dssp CSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCCSSSC
T ss_pred CCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCCCCcE
Confidence 999999999999999999999999999986 68899999999999999888 88 87753210
Q ss_pred ---------------C---C-----------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC
Q psy15158 595 ---------------P---G-----------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD 645 (709)
Q Consensus 595 ---------------~---g-----------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~ 645 (709)
+ | ++||||+++|+++|||+++|||+|.++++++++++++|+||||++..+.
T Consensus 870 v~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~ 949 (1001)
T 3haz_A 870 VAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGA 949 (1001)
T ss_dssp CCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCC
T ss_pred EeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCC
Confidence 0 1 3899999999999999999999999999999999999999999987665
Q ss_pred C--CCCCCCCCCCCCCC-ccChHHHHHHHHHhceeEEEEecc
Q psy15158 646 V--AAPFGGFKQSGFGK-DLDINKAMYFVDKIDSGTVFINTY 684 (709)
Q Consensus 646 ~--~~PFGG~k~SG~G~-~~G~~~~~~ftr~~~~ktV~iN~~ 684 (709)
. .+||||+|.||+|+ ++|+.++.+|++ .|+|+++..
T Consensus 950 ~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~---~K~v~~~~~ 988 (1001)
T 3haz_A 950 VVGVQPFGGNGLSGTGPKAGGPHYLARFAT---EQTVTINTA 988 (1001)
T ss_dssp CTTTSCBCCCGGGBCCCCBTSTTSGGGGEE---EEEEEEECG
T ss_pred CCCCCCCCCcccCcCCCCCCCHHHHHHhce---eeEEEECCc
Confidence 3 68999999999995 566776776666 799999864
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-75 Score=656.19 Aligned_cols=401 Identities=25% Similarity=0.331 Sum_probs=350.9
Q ss_pred CCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHH
Q psy15158 284 MANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363 (709)
Q Consensus 284 ~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~ 363 (709)
..+.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+|||+.++...|+..+++.++|++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS-SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ----CHHHHHHHHHHHHHH-TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3456799999999999998 999999999999999999999999999999999999999999876699999999999988
Q ss_pred HHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHH
Q psy15158 364 WCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR 443 (709)
Q Consensus 364 ~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~e 443 (709)
.+.+..................++.++|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++..+++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 77665433211100001123578899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHH
Q psy15158 444 AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMS 523 (709)
Q Consensus 444 AGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~i 523 (709)
+ +|+|++|+|+|++ +.+..|+.| +|++|+||||+++|+.|++.+++ ++||+++|||||||+||++|||++.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999964 455678888 89999999999999999999885 899999999999999999999999999999
Q ss_pred HhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECC
Q psy15158 524 MGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGG 589 (709)
Q Consensus 524 v~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG 589 (709)
++++|.|+||.|+|++|||||++++|+|+++|+++++++ ++..+++++.+++ +|+++++||
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 999999999999999999999999999999999998875 6889999999998 689999998
Q ss_pred ccCCC-------------C----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEE
Q psy15158 590 KRLDR-------------P----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVF 637 (709)
Q Consensus 590 ~~~~~-------------~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~ 637 (709)
..... + | |+||||+++|+++|||+++|||+|.++++++++++++|+|+
T Consensus 324 ~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~ 403 (469)
T 3sza_A 324 TGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403 (469)
T ss_dssp CEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred ccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 64210 0 1 99999999999999999999999999999999999999999
Q ss_pred EcCCCC--CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccCC---C-CCCCCCCCCc
Q psy15158 638 INTYNK--TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNK---T-DVAAPFGGFK 697 (709)
Q Consensus 638 VN~~~~--~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~~---~-~~~~Pf~g~k 697 (709)
||++.. ..+.+||||+|+||+|+++|.+++..|++ .|+|+++.... . ....||+..|
T Consensus 404 vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~---~K~v~~~~~~~~~~~~~~yppy~~~~ 466 (469)
T 3sza_A 404 ANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSH---RRSCLVRPLMNDEGLKVRYPPSPAKM 466 (469)
T ss_dssp ESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEE---EEEEEECCSSCCGGGGGGSSSCCC--
T ss_pred EeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhC---eeEEEECCcccccccccccCCCCccc
Confidence 999763 35678999999999999999999998888 79998875431 1 2346776544
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-75 Score=665.42 Aligned_cols=407 Identities=18% Similarity=0.263 Sum_probs=361.8
Q ss_pred CCCCeeeeecCCCCCeE-EEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q psy15158 263 VGGSSMECINPANESTI-CSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGA 341 (709)
Q Consensus 263 ~~~~~~~v~nP~tge~i-~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk 341 (709)
.++++++++||+||+++ ++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+||
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR-DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 45678999999999999 79999999999999999999998 99999999999999999999999999999999999999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHh--hhCccccc--cCCCCCC-CceeeeecccCEEEEECCCCchHHHH--HHHHHH
Q psy15158 342 VYTLALKTHVGMSIDTWKYFAGWCDK--ILGSTIPI--AHARPNS-NFTFTKREPIGVCGLITPWNYPLMML--SWKMAP 414 (709)
Q Consensus 342 ~~~~a~~~ev~~aid~lr~~a~~~~~--~~g~~~p~--~~~~~~~-~~~~~~~~P~GVv~~I~PwNfPl~~~--~~~iap 414 (709)
|+.++.. |+..+++.++||+..+++ ..+...+. +...+.+ ...+++++|+|||++|+|||||+.+. .++++|
T Consensus 83 ~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 83 PEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 9998874 999999999999999876 43332211 0001211 13578999999999999999999984 499999
Q ss_pred HHHcCCEEEeeCCCCchHHHHHHHHHH----HHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 415 CLAAGNTVVMKPSEVSPLTALKLAELS----VRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 415 ALaaGNtVVlKPs~~tplta~~l~ell----~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.+
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 999999999999999999999999998 5679999999999998888999999999999999999999999999998
Q ss_pred HhcC--CCcEEEcCCCcccEEEcCCCCHH--HHHHHHHhhhhccCCCcccCCcEEEEeCc-cHHHHHHHHHHHHHhh---
Q psy15158 491 AESN--LKKVSLELGGKSPLVIFDDYNLD--KAVRMSMGGVFFNKGENCISAGRIFVDSN-IYDAFLEKVVTEVKKM--- 562 (709)
Q Consensus 491 a~~~--~k~v~lElGGknp~IV~~dADle--~Aa~~iv~saf~~~GQ~C~A~~rl~V~es-i~d~fl~~L~~~~~~l--- 562 (709)
++ + +||+++|||||||+||++|||++ .|++.+++++|.|+||.|+|++|||||++ ++|+|+++|+++++++
T Consensus 242 a~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~g 320 (510)
T 1ez0_A 242 HE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPS 320 (510)
T ss_dssp HH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCCB
T ss_pred hc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCCC
Confidence 86 5 49999999999999999999999 99999999999999999999999999999 9999999999999987
Q ss_pred --hcHHHHHHHHHHHHHHHh-cCCEEEECCc---cCC-------------C----C---C---------CHHHHHHHHhc
Q psy15158 563 --NHKAHLDKLIDYCEKAKS-EGARLLIGGK---RLD-------------R----P---G---------DVDAVIKRANS 607 (709)
Q Consensus 563 --~~~~~~~~i~~~i~~a~~-~Ga~vl~GG~---~~~-------------~----~---g---------dldeaI~~~N~ 607 (709)
+++.+.+++.++++++++ +|+++++||. +.. . + | |+||||+++|+
T Consensus 321 p~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~ 400 (510)
T 1ez0_A 321 TLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEM 400 (510)
T ss_dssp CCSSHHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhc
Confidence 677888999999999984 7899999873 110 0 0 1 89999999999
Q ss_pred CCCCCeEEEEccch--HHHHHHHHhc--CeeeEEEcCCCCC---CCCCCCCC-CCCCCCCC--ccChHHHHHHHH
Q psy15158 608 TEYGLASGIFTSDI--NKAMYFVDKI--DSGTVFINTYNKT---DVAAPFGG-FKQSGFGK--DLDINKAMYFVD 672 (709)
Q Consensus 608 t~yGLta~V~T~d~--~~a~~va~~l--~aG~V~VN~~~~~---~~~~PFGG-~k~SG~G~--~~G~~~~~~ftr 672 (709)
++|||+++|||+|. ++++++++++ ++|+||||++..+ ...+|||| +|.||+|+ ..|.+++.+|++
T Consensus 401 ~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~ 475 (510)
T 1ez0_A 401 LAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLR 475 (510)
T ss_dssp CCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEE
T ss_pred CCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhhe
Confidence 99999999999987 7999999999 7999999987653 45789999 79999985 368887777755
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-72 Score=630.60 Aligned_cols=397 Identities=16% Similarity=0.148 Sum_probs=323.0
Q ss_pred eeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhc-------CC
Q psy15158 269 ECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDS-------GA 341 (709)
Q Consensus 269 ~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~-------Gk 341 (709)
-++||+||+++++++.++.+++++|+++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+ ||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk 88 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR-MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence 4679999999999999999999999999999998 999999999999999999999999999999999999 79
Q ss_pred hHHH----HHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHH
Q psy15158 342 VYTL----ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLA 417 (709)
Q Consensus 342 ~~~~----a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALa 417 (709)
|+.+ +. .|+..+++.++||+..+++..++..+... .+.+...++.++|+|||++|+||| |.+.. ++++|||+
T Consensus 89 ~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 89 PLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTR-IAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEE-EETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred chhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCccccccc-CCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9873 55 59999999999999988887776543210 012334678999999999999777 77666 89999999
Q ss_pred cCCEEEeeCCCCchHHHHHHHHHHHHc----CCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhc
Q psy15158 418 AGNTVVMKPSEVSPLTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493 (709)
Q Consensus 418 aGNtVVlKPs~~tplta~~l~ell~eA----GlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~ 493 (709)
+||+||+|||+.+|+++..+++++.++ | |+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6778999999999999999999999999999875
Q ss_pred CCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHH-HHHHHHHHHHHhhhcHHHHHHHH
Q psy15158 494 NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD-AFLEKVVTEVKKMNHKAHLDKLI 572 (709)
Q Consensus 494 ~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d-~fl~~L~~~~~~l~~~~~~~~i~ 572 (709)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|+|++|||||++++| .+ ++
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~----------------~~--- 299 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPL----------------FD--- 299 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHH----------------HH---
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHH----------------HH---
Confidence 899999999999999999999999999999999999 999999999999999998 22 22
Q ss_pred HHHHHHHhcCCEEEECCccC------C------CC---C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHH
Q psy15158 573 DYCEKAKSEGARLLIGGKRL------D------RP---G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFV 628 (709)
Q Consensus 573 ~~i~~a~~~Ga~vl~GG~~~------~------~~---g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va 628 (709)
++++.++++|++++.|+... + .+ | |+||||+++|+++|||+++|||+|.+++.+++
T Consensus 300 ~~i~~~~~~Ga~v~~G~~~~~~g~~~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 379 (463)
T 2h5g_A 300 QIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFL 379 (463)
T ss_dssp HHHHHHHHTTCEEEECHHHHC---------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCCcccccCccCCCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHH
Confidence 24667778899988655311 0 00 1 99999999999999999999999999999999
Q ss_pred HhcCeeeEEEcCCCCCCCCCCCCCCCCCCCC--Cc--cChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCC
Q psy15158 629 DKIDSGTVFINTYNKTDVAAPFGGFKQSGFG--KD--LDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGF 701 (709)
Q Consensus 629 ~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G--~~--~G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~ 701 (709)
+++++|+||||++......+||||+|+||+| ++ .|.+++.+|++ .|+|+++.. ..+.||...+.+.+
T Consensus 380 ~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~---~K~v~~~~~---~~r~~y~~~~~~~~ 450 (463)
T 2h5g_A 380 QHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLT---TKWLLRGKD---HVVSDFSEHGSLKY 450 (463)
T ss_dssp HHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEE---EEEEEECSS---CCGGGGSTTSSCCC
T ss_pred HhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhce---eEEEEECCC---cccCCccccchhhc
Confidence 9999999999998766778999999999999 65 88888888777 789888753 23368876666544
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-67 Score=590.70 Aligned_cols=382 Identities=17% Similarity=0.178 Sum_probs=309.5
Q ss_pred hhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChH----HHHHhhHHHH-HHHHHHHHH
Q psy15158 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVY----TLALKTHVGM-SIDTWKYFA 362 (709)
Q Consensus 288 ~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~----~~a~~~ev~~-aid~lr~~a 362 (709)
..+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+|||. .++...|+.. +++.++|++
T Consensus 14 ~~~~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 14 SSSQQIAKNARKAGN-ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp CHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hhHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 358999999999998 9999999999999999999999999999999999999998 7875458888 999999999
Q ss_pred HHHHhhh------CccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHH
Q psy15158 363 GWCDKIL------GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436 (709)
Q Consensus 363 ~~~~~~~------g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~ 436 (709)
..++++. ++..+... .+++...++.++|+|||++|+||| | .+.+++++|||++||+||+|||+.+|+++..
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 169 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARE-LDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFRE 169 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEE-EETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcCCCCCeeccccc-CCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence 9988876 43322110 012344688999999999999999 9 9999999999999999999999999999999
Q ss_pred HHHHHH----H----cCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE
Q psy15158 437 LAELSV----R----AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508 (709)
Q Consensus 437 l~ell~----e----AGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~ 508 (709)
+++++. + +|+|+|++|+|+ +++++++.|+.||+|++|+||||+++|+.|++.+ +||+++|+|||||+
T Consensus 170 l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~ 244 (468)
T 1vlu_A 170 MAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI 244 (468)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred HHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccce
Confidence 999995 8 999999999999 7768899999999999999999999999998864 69999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhh----cHHHHHHHHHH-HHHHHhcCC
Q psy15158 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN----HKAHLDKLIDY-CEKAKSEGA 583 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~----~~~~~~~i~~~-i~~a~~~Ga 583 (709)
||++|||++.|++.+++++|.|+| .|+|++|||||+++ |+|+++|+++++++. ..... .++ +++++
T Consensus 245 iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---~~~~i~~a~---- 315 (468)
T 1vlu_A 245 YLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---KTAYFDKLN---- 315 (468)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH---HHHHHHHHH----
T ss_pred EECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH---hcccccccc----
Confidence 999999999999999999999999 99999999999999 999999999999872 22211 445 66654
Q ss_pred EEEECCc------cC--C----C---CC---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEc
Q psy15158 584 RLLIGGK------RL--D----R---PG---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639 (709)
Q Consensus 584 ~vl~GG~------~~--~----~---~g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN 639 (709)
++++||. .. + . -| |+||||+++|+++|||+++|||+|.++++++++++++|+|+||
T Consensus 316 ~~~~gG~g~~Ptvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN 395 (468)
T 1vlu_A 316 ELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN 395 (468)
T ss_dssp HHTCCCHHHHTTBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred eeeccCCCCCCceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEc
Confidence 2444442 00 0 0 01 9999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCC-----CCCCCCCCCccChHHHHHHHHHhceeEEEEeccCCCCCCCCCC
Q psy15158 640 TYNKTDVAAPFG-----GFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKTDVAAPFG 694 (709)
Q Consensus 640 ~~~~~~~~~PFG-----G~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~ 694 (709)
++....+..||| |+|.||+|++ |..++..|++ .|+++.+.. ..+.||.
T Consensus 396 ~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~---~K~v~~~~~---~~r~py~ 448 (468)
T 1vlu_A 396 ASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVS---YQYQIRGDG---QVASDYL 448 (468)
T ss_dssp SCGGGCC-----------------------CCSGGGEE---EEEEEECSS---CCSCCC-
T ss_pred CCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcc---eEEEEECCC---CcCcccc
Confidence 987666778999 9999999999 9988888877 789888753 3337886
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-66 Score=576.91 Aligned_cols=379 Identities=18% Similarity=0.207 Sum_probs=313.9
Q ss_pred hhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHH----HHHh-------hHHHHHH
Q psy15158 287 SDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT----LALK-------THVGMSI 355 (709)
Q Consensus 287 ~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~----~a~~-------~ev~~ai 355 (709)
.+++++|+++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+||+.. ++.. .++..++
T Consensus 25 ~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~ 103 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR-SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMV 103 (444)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHH
Confidence 5789999999999998 99999999999999999999999999999999999999853 4432 2788999
Q ss_pred HHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHH
Q psy15158 356 DTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTAL 435 (709)
Q Consensus 356 d~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~ 435 (709)
+.++||+.+++. .+...+... .+.+...+++++|+|||++|+||| | .+.+++++|||++||+||+|||+.+|+++.
T Consensus 104 ~~l~~~a~~~~~-~g~~~~~~~-~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 104 EGLRQVATLPDP-IGEMSNLKY-RPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEE-CTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHhhccc-cCccCCccc-CCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 999999988754 344333211 123455788999999999999998 9 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEecCCch-hHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEE
Q psy15158 436 KLAELS----VRAGFPKGVINILPGTGA-VTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510 (709)
Q Consensus 436 ~l~ell----~eAGlP~gvv~vv~g~g~-~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV 510 (709)
.+++++ .++|+|+|++|+|+|++. .+++.|..||+|+.|+||||+.+|+.|++.+ ++|+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998665 5888888999999999999999999998754 6999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-h---cHHHHHHHHHHHHHHHhcCCEEE
Q psy15158 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-N---HKAHLDKLIDYCEKAKSEGARLL 586 (709)
Q Consensus 511 ~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-~---~~~~~~~i~~~i~~a~~~Ga~vl 586 (709)
++|||++.|++.+++++|.|+| .|+|++|+|||++++|+|+++|+++++++ . ... ...++++++. .| .++
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p---~~~~~i~~a~-~G-~~~ 329 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA---DARAVLEAAG-VG-PLV 329 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH---HHHHHHHHTT-CC-CCE
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH---HHHHHHHhcc-cC-ccc
Confidence 9999999999999999999999 99999999999999999999999999987 2 222 2346666653 23 111
Q ss_pred ECCccC-CCC--C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCC
Q psy15158 587 IGGKRL-DRP--G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFK 654 (709)
Q Consensus 587 ~GG~~~-~~~--g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k 654 (709)
.-.... ..+ | |+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.......||||.+
T Consensus 330 ~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~ 409 (444)
T 4ghk_A 330 DATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGA 409 (444)
T ss_dssp ECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSC
T ss_pred CCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcc
Confidence 101000 111 1 9999999999999999999999999999999999999999999987777789999999
Q ss_pred CCCCC----CccChHHHHHHHHHhceeEEEEec
Q psy15158 655 QSGFG----KDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 655 ~SG~G----~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
.||+| +++|.++++.|++ .|+|+++.
T Consensus 410 ~sG~g~~~~~~~G~~gl~~~t~---~K~v~~~~ 439 (444)
T 4ghk_A 410 EIGISNDKLHARGPVGLEGLTS---LKYVVLGH 439 (444)
T ss_dssp CSEEECCSSSCCEEECGGGGEE---EEEEEEEE
T ss_pred cccccCCcccCCChhHHHhhce---EEEEEECC
Confidence 99998 6789888888877 78888765
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-66 Score=581.80 Aligned_cols=385 Identities=17% Similarity=0.173 Sum_probs=326.0
Q ss_pred EEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHH
Q psy15158 280 CSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWK 359 (709)
Q Consensus 280 ~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr 359 (709)
++++.++.+++++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||+..++...+...+++.+.
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQK-ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 34567789999999999999998 99999999999999999999999999999999999999988765333444444333
Q ss_pred HHHHHHHhhhCc-cccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHH
Q psy15158 360 YFAGWCDKILGS-TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLA 438 (709)
Q Consensus 360 ~~a~~~~~~~g~-~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ 438 (709)
.++...... .++. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..++
T Consensus 83 ---~~~~~~~~~g~~~~----~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~ 155 (464)
T 3k9d_A 83 ---NYIKDMKTIGMLKE----DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155 (464)
T ss_dssp ---HHHTTCCCSEEEEE----ETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred ---Hhhhcccccceecc----CCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence 333221110 1111 12345788899999999999999999999999999999999999999999999999865
Q ss_pred H----HHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCC-CcccEEEcCC
Q psy15158 439 E----LSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELG-GKSPLVIFDD 513 (709)
Q Consensus 439 e----ll~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElG-Gknp~IV~~d 513 (709)
+ ++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+.+ .++++ +++||+ +|+| ||+|+||++|
T Consensus 156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~d 229 (464)
T 3k9d_A 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERS 229 (464)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTT
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCC
Confidence 4 5688999999999999988899999999999999999999974 44555 488999 7777 9999999999
Q ss_pred CCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHh-------h----------------hcHHHHHH
Q psy15158 514 YNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK-------M----------------NHKAHLDK 570 (709)
Q Consensus 514 ADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~-------l----------------~~~~~~~~ 570 (709)
||++.|++.+++|+|+|+||.|+|++|||||+++||+|+++|++.... + ++.++.++
T Consensus 230 ADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~ 309 (464)
T 3k9d_A 230 ANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH 309 (464)
T ss_dssp SCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence 999999999999999999999999999999999999999999986421 1 34456888
Q ss_pred HHHHHHHHHhcCCEEEECCccCCCC---------C---------CHHHHH----HHHhcCCCCCeEEEEccchHHHHHHH
Q psy15158 571 LIDYCEKAKSEGARLLIGGKRLDRP---------G---------DVDAVI----KRANSTEYGLASGIFTSDINKAMYFV 628 (709)
Q Consensus 571 i~~~i~~a~~~Ga~vl~GG~~~~~~---------g---------dldeaI----~~~N~t~yGLta~V~T~d~~~a~~va 628 (709)
+.++++.++.+|+++++||.....+ | |+|||| +++|+++|||+++|||+|.+++++++
T Consensus 310 i~~~~~~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~ 389 (464)
T 3k9d_A 310 IANLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFA 389 (464)
T ss_dssp HHHHTTCCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHH
T ss_pred HHHHhhhhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHH
Confidence 8999988888999999998532111 1 999997 78999999999999999999999999
Q ss_pred HhcCeeeEEEcCCCC---------CCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEe
Q psy15158 629 DKIDSGTVFINTYNK---------TDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 629 ~~l~aG~V~VN~~~~---------~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN 682 (709)
+++++|+|+||++.. ..+..|||| +.+|.|...|..+++.|++ .|+|...
T Consensus 390 ~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~---~k~v~~~ 448 (464)
T 3k9d_A 390 LKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFN---IRRIATG 448 (464)
T ss_dssp HHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEE---EEEEEEC
T ss_pred HhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheE---EEEEEec
Confidence 999999999999764 356789999 7789999888877777766 5777654
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-65 Score=569.99 Aligned_cols=374 Identities=18% Similarity=0.207 Sum_probs=318.1
Q ss_pred hhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChH----HHHHh-------hHHHHHH
Q psy15158 287 SDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVY----TLALK-------THVGMSI 355 (709)
Q Consensus 287 ~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~----~~a~~-------~ev~~ai 355 (709)
-+++++++++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+||+. .++.. .|+..++
T Consensus 13 ~~~~~~av~aA~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 13 MDELLEKAKKVREAWD-VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp -CHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 4589999999999998 9999999999999999999999999999999999999986 45531 4899999
Q ss_pred HHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHH
Q psy15158 356 DTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTAL 435 (709)
Q Consensus 356 d~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~ 435 (709)
+.++||+.++++ .+...+... .+.+...+++++|+|||++|+||| | .+++++++|||++||+||+|||+.+|+++.
T Consensus 92 ~~l~~~a~~~~~-~g~~~~~~~-~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-VGEVIDSWV-REDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEE-CTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-cCccccccc-cCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 999999998765 444333210 122344678999999999999987 4 688899999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEecCC-chhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEE
Q psy15158 436 KLAELSV----RAGFPKGVINILPGT-GAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510 (709)
Q Consensus 436 ~l~ell~----eAGlP~gvv~vv~g~-g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV 510 (709)
.+++++. ++|+|+|++|+|+|. ++++++.|..||+|++|+||||+++|+.|++.+ ++|+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 689999999999984 567889999999999999999999999998875 5999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHhcCCEEE
Q psy15158 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN----HKAHLDKLIDYCEKAKSEGARLL 586 (709)
Q Consensus 511 ~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~----~~~~~~~i~~~i~~a~~~Ga~vl 586 (709)
++|||++.|++.+++++|.|+| .|+|++|+|||++++|+|+++|+++++++. .... ...++ .++.
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~gg~~---~~~~~-------Ptl~ 312 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEK---TREIV-------PDVV 312 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHH---HHHHS-------TTSE
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCeeecChh---hhhhC-------Cccc
Confidence 9999999999999999999999 999999999999999999999999999871 1111 11222 0121
Q ss_pred ECCccC-CC--CC---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCC
Q psy15158 587 IGGKRL-DR--PG---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFK 654 (709)
Q Consensus 587 ~GG~~~-~~--~g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k 654 (709)
--.... .. -| |+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++......+||||.|
T Consensus 313 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~ 392 (427)
T 1o20_A 313 PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGA 392 (427)
T ss_dssp ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSC
T ss_pred CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcc
Confidence 111111 01 11 9999999999999999999999999999999999999999999876666678999999
Q ss_pred CCCCC----CccChHHHHHHHHHhceeEEEEec
Q psy15158 655 QSGFG----KDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 655 ~SG~G----~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
.||+| ++.|.+++++|++ .|+++.+.
T Consensus 393 ~SG~g~~~~~~~g~~gl~~~~~---~k~v~~~~ 422 (427)
T 1o20_A 393 EIGISTQRFHARGPVGLRELTT---YKFVVLGE 422 (427)
T ss_dssp CSCEECSSSSCCEECCTGGGEE---EEEEEECS
T ss_pred cccccCCcccCCChHHHHHHhc---eEEEEECC
Confidence 99997 4678888887777 78888764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-63 Score=557.83 Aligned_cols=354 Identities=21% Similarity=0.242 Sum_probs=296.5
Q ss_pred EeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHH-HH
Q psy15158 282 VQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTW-KY 360 (709)
Q Consensus 282 v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~l-r~ 360 (709)
++.++.+++++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||++.++...++..+++.+ +|
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~-~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~ 79 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE-EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNK 79 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999998 9999999999999999999999999999999999999999988754666667666 44
Q ss_pred HHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHH
Q psy15158 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAEL 440 (709)
Q Consensus 361 ~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~el 440 (709)
|+.. +..+. ++ .+.+...+..++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++..++++
T Consensus 80 ~~~~--~~~g~-~~----~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 152 (452)
T 3my7_A 80 YKDE--QTCGI-LE----EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKL 152 (452)
T ss_dssp HTTC--CCSEE-C-----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred hhhc--ccccc-cc----CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHH
Confidence 4321 11111 11 11223467899999999999999999999999999999999999999999999999998888
Q ss_pred HH----HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCH
Q psy15158 441 SV----RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNL 516 (709)
Q Consensus 441 l~----eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADl 516 (709)
+. ++|+|+|++|+|+|++.+++++|+.||+|++|+||||+.+++ +++ +++||+++|+|||||+||++|||+
T Consensus 153 ~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl 227 (452)
T 3my7_A 153 VLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADI 227 (452)
T ss_dssp HHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCH
T ss_pred HHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCH
Confidence 76 789999999999998889999999999999999999998654 454 478999999999999999999999
Q ss_pred HHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCcc-----
Q psy15158 517 DKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKR----- 591 (709)
Q Consensus 517 e~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~----- 591 (709)
+.|++.++.|+|+|+||.|+|++|+|||+++||+|+++|+++...++++++.+++.++++.+...|+++ +||..
T Consensus 228 ~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~ 306 (452)
T 3my7_A 228 KRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAE 306 (452)
T ss_dssp HHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTTTEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHH
Confidence 999999999999999999999999999999999999999998877799999999999997544444443 23321
Q ss_pred -----------------C-C-CC---------C---------CHHHHHHHHhcCC----CCCeEEEEccchHHHHH---H
Q psy15158 592 -----------------L-D-RP---------G---------DVDAVIKRANSTE----YGLASGIFTSDINKAMY---F 627 (709)
Q Consensus 592 -----------------~-~-~~---------g---------dldeaI~~~N~t~----yGLta~V~T~d~~~a~~---v 627 (709)
. + .+ | |+||||+++|++. |||+++|||+|.+++++ +
T Consensus 307 ~~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~ 386 (452)
T 3my7_A 307 MAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYF 386 (452)
T ss_dssp HHTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHH
T ss_pred hCCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHH
Confidence 1 0 00 1 9999999999985 99999999999888877 9
Q ss_pred HHhcCeeeEEEcCCCCCCCCCCCCCCCC
Q psy15158 628 VDKIDSGTVFINTYNKTDVAAPFGGFKQ 655 (709)
Q Consensus 628 a~~l~aG~V~VN~~~~~~~~~PFGG~k~ 655 (709)
++++++|+|+||+++ ||||.|.
T Consensus 387 a~~l~~G~V~VN~~~------~~Gg~G~ 408 (452)
T 3my7_A 387 GDKMKTARILINIPT------THGGIGD 408 (452)
T ss_dssp HHHCCCSEEEESCCC------C------
T ss_pred HHhCCEEEEEECCCC------CCccccc
Confidence 999999999999964 5887765
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-16 Score=168.46 Aligned_cols=104 Identities=32% Similarity=0.508 Sum_probs=92.2
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC-CCCCceeeccCCCCCceeeCCceEE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA-NIEGTPVTVEGSDTPAILHPDGLLF 80 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (709)
|+.++ +++.|||++++++|+|+|||++|||||||.++|+++|||+++..+.. ..+|+++.+.+...||.+.++|++|
T Consensus 222 ya~ki~~~d~~Idw~~~a~~I~~~iRa~~p~Pga~t~~~g~~~ki~~a~~~~~~~~~~g~~~~~~~~~~pG~i~~~~~~V 301 (329)
T 2bw0_A 222 YEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLIL 301 (329)
T ss_dssp BCCCCCGGGGBCCCSSCHHHHHHHHHTTTTTTCCEEEETTEEEEEEEEESCCTTCCCCSEEECCTTCSSCEEEETTEEEE
T ss_pred cccCCCHHHcEEcccCCHHHHHHHHhccCCCCceEEEECCEEEEEEEEEEecccccccccccccccCCCCeEEECCeEEE
Confidence 66666 88999999999999999999999999999999999999999876543 3568888877777899999999999
Q ss_pred EeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcc
Q psy15158 81 TGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGK 138 (709)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 138 (709)
.|+||..| .|.+|| +|||+|+|.+|.+
T Consensus 302 ~~~dg~~l-------------------------------~i~~lq~~gkk~m~a~~~~~ 329 (329)
T 2bw0_A 302 FGNDDKML-------------------------------LVKNIQLEDGKMILASNFFK 329 (329)
T ss_dssp ECTTSCEE-------------------------------EEEEEECTTSCEEEGGGTTC
T ss_pred EeCCCCEE-------------------------------EEeEEECCCCCcCCHHHHhC
Confidence 99999558 999999 9999999999974
|
| >3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.60 E-value=9e-16 Score=163.36 Aligned_cols=96 Identities=17% Similarity=0.338 Sum_probs=82.8
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--CCCCceeeccCCCCCceeeCCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--NIEGTPVTVEGSDTPAILHPDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (709)
|+.++ +++.|||++++++|||+|||++|||||||.++|+++|||.++..+.. ..+|+++.+. ++|++
T Consensus 202 ya~ki~~~d~~Idw~~~a~~I~~~iRa~~P~Pga~~~~~g~~~ki~~a~~~~~~~~~~pG~v~~~~---------~~~l~ 272 (314)
T 3tqq_A 202 YASKIQKQEALIDWRKSAVEIARQVRAFNPTPIAFTYFEGQPMRIWRATVVDEKTDFEPGVLVDAD---------KKGIS 272 (314)
T ss_dssp BCCCCCGGGGBCCTTSBHHHHHHHHHHTTTTTCCEEEETTEEEEEEEEEEECCCCSSCTTCEEEEE---------TTEEE
T ss_pred CCCCCCHHHheecccCCHHHHHHHHhccCCCCceEEEECCEEEEEEEEEEecCCCCCCCcEEEEec---------CCEEE
Confidence 66665 89999999999999999999999999999999999999999875432 2344444433 78999
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|.|+|| .| .|.+|| +|||+|++.+|.+|.
T Consensus 273 V~~~dg-~l-------------------------------~i~~lq~~gkk~m~~~~f~~g~ 302 (314)
T 3tqq_A 273 IAAGSG-IL-------------------------------RLHQLQLPGKRVCSAGDFINAH 302 (314)
T ss_dssp EECSBS-EE-------------------------------EEEEEECTTSCCEEHHHHHHHH
T ss_pred EEECCC-EE-------------------------------EEeEEEcCCCCccCHHHHhccC
Confidence 999999 89 999999 999999999999873
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.59 E-value=9.9e-16 Score=163.22 Aligned_cols=96 Identities=14% Similarity=0.227 Sum_probs=82.8
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--CCCCceeeccCCCCCceeeCCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--NIEGTPVTVEGSDTPAILHPDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (709)
|+.++ +++.|||++++++|||+|||++|||||||.++|+++|||.++..+.. ..+|+++.+. ++|++
T Consensus 207 ya~ki~~~d~~Idw~~~a~~I~~~iRa~~P~Pga~~~~~g~~~ki~~a~~~~~~~~~~pG~i~~~~---------~~~~~ 277 (318)
T 3q0i_A 207 YAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVAENSIKVWQARVETRAVTQTPGTIIQAD---------KSGIY 277 (318)
T ss_dssp BCCCCCHHHHBCCTTSBHHHHHHHHHHTTTTTCCEEEETTEEEEEEEEEEECCCCCSCTTBEEEEE---------TTEEE
T ss_pred ECCCCCHHHceeccCCCHHHHHHHHhccCCCCceEEEECCEEEEEEEEEEecCCCCCCCcEEEEEc---------CCEEE
Confidence 66666 78999999999999999999999999999999999999999875432 2344444433 78999
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|.|+|| .| .|.+|| +|||+|++.+|.+|.
T Consensus 278 V~~~dg-~l-------------------------------~i~~lq~~gkk~m~a~~f~~g~ 307 (318)
T 3q0i_A 278 VATGQD-VL-------------------------------VLESLQIPGKKALPVQDILNAR 307 (318)
T ss_dssp EECSBS-EE-------------------------------EEEEEECTTSCCEEHHHHHHHH
T ss_pred EEECCc-EE-------------------------------EEEEEEcCCCCcccHHHHhccC
Confidence 999999 79 999999 999999999999874
|
| >1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-15 Score=161.11 Aligned_cols=96 Identities=21% Similarity=0.363 Sum_probs=82.2
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--CCCCceeeccCCCCCceeeCCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--NIEGTPVTVEGSDTPAILHPDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (709)
|+.++ +++.|||++++++|||+|||++|||||||.++|+++|||+++..+.. ..+|+++.++ ++|++
T Consensus 203 ya~ki~~~d~~Idw~~~a~~i~~~iRa~~p~Pga~~~~~g~~~ki~~a~~~~~~~~~~pG~i~~~~---------~~~~~ 273 (314)
T 1fmt_A 203 YAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEAN---------KQGIQ 273 (314)
T ss_dssp BCCCCCHHHHBCCTTSBHHHHHHHHHHTTTTTCEEEEETTEEEEEEEEEEECCCCCSCTTBEEEEE---------TTEEE
T ss_pred cCCCCCHHHhhhcccccHHHHHHHHhccCCCCceEEEECCEEEEEEEEEEccCCCCCCCceEEEec---------CCEEE
Confidence 66666 78999999999999999999999999999999999999999875432 1345544433 68899
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|.|+|| .| .|.+|| +|||+|++.+|.++.
T Consensus 274 V~~~dg-~l-------------------------------~i~~~q~~gkk~m~a~~~~~g~ 303 (314)
T 1fmt_A 274 VATGDG-IL-------------------------------NLLSLQPAGKKAMSAQDLLNSR 303 (314)
T ss_dssp EECSBS-EE-------------------------------EEEEEEETTSCCEEHHHHHHHS
T ss_pred EEeCCC-EE-------------------------------EEEEEEcCCCCCCCHHHHhccC
Confidence 999999 79 999999 999999999999874
|
| >2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.9e-14 Score=151.23 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=79.7
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccC-CCCcceEEEECCeEEEEEEEEecccCCCCCceeeccCCCCCceee-CCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGL-DSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAILH-PDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~-~~~p~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (709)
|+.++ +++.|||++++++|||+|||| +|||||||.++|+++|||+++..+.. ....||.+. .++++
T Consensus 197 ya~k~~~~d~~Idw~~~a~~i~~~iRa~~~p~Pga~~~~~g~~~ki~~a~~~~~~----------~~~~pG~i~~~~~~~ 266 (305)
T 2bln_A 197 CFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHA----------SKAQPGSVISVAPLL 266 (305)
T ss_dssp EECCCCGGGGBCCTTSBHHHHHHHHHHTCTTSCCEEEEETTEEEEEEEEEEECSC----------CCSCTTBEEEETTEE
T ss_pred cCCCCCHHHcEECCcCCHHHHHHHHhccCCCCCceEEEECCEEEEEEEEEEccCC----------CCCCCCEEEEECCEE
Confidence 55555 889999999999999999999 59999999999999999999874321 123466442 35699
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|.|+|| .| .|.++| +|||+|++.+|.++.
T Consensus 267 V~~~dg-~l-------------------------------~i~~~q~~gkk~m~~~~~~~g~ 296 (305)
T 2bln_A 267 IACGDG-AL-------------------------------EIVTGQAGDGITMQGSQLAQTL 296 (305)
T ss_dssp EECSBS-EE-------------------------------EEEEEEETTSCCEEHHHHHHHH
T ss_pred EEeCCc-eE-------------------------------EEEEEecCCCceecHHHHHhcC
Confidence 999999 79 999999 999999999999873
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.6e-14 Score=127.51 Aligned_cols=98 Identities=43% Similarity=0.612 Sum_probs=88.5
Q ss_pred cchhhhcccCCCCcccccChhHhhhhHHHHHHHhhhcc--cCcCCCccccccCCCcchhHHHHHHHHhhcC-ceeccccc
Q psy15158 131 IHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILN--SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQ-ITLQNEDV 207 (709)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ne~v 207 (709)
-+|++|++.++++ +.+||+.+..+...|+.||+.||. ..|..++|||..|+.|+.++|||.+|++.++ +++...++
T Consensus 3 ~~a~~~~~~~~~~-~~~lt~~~~~~E~~La~iW~~vL~~~~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~L 81 (110)
T 2cq8_A 3 SGSSGFFKGAASS-VLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDV 81 (110)
T ss_dssp CSSCCCCSCSSCS-SCCCCTTHHHHHHHHHHHHHHHCSSCSCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHH
T ss_pred chHHHHHhccCcc-hhhhcCcchHHHHHHHHHHHHHhCCCCCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHH
Confidence 3789999887765 679999999999999999999998 4899999999999999999999999999999 99999999
Q ss_pred cccchhhhhHHhHhhccCCCCC
Q psy15158 208 LMSSVFRDFYIKVIEVSRQGDV 229 (709)
Q Consensus 208 ~~~~~f~~f~~~~r~~s~G~d~ 229 (709)
|+++++.+|.+.+.+..+|.|.
T Consensus 82 f~~pTl~~lA~~l~~~~~~~~~ 103 (110)
T 2cq8_A 82 YMASTFGDFIQLLVRKLRGDDE 103 (110)
T ss_dssp HHCCBHHHHHHHHHHHHHHCCC
T ss_pred HhCCCHHHHHHHHHHHhccccc
Confidence 9999999999998776655543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-12 Score=146.49 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=79.6
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccC-CCCcceEEEECCeEEEEEEEEecccCCCCCceeeccCCCCCceee-CCceE
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGL-DSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAILH-PDGLL 79 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~-~~~p~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (709)
|+.++ +++.|||++++++|||+|||+ +|||||||.++|+++|||+++..+.. ....||.+. .++++
T Consensus 197 ~~~~~~~~~~~idw~~~a~~i~~~ira~~~p~p~a~~~~~~~~~~i~~~~~~~~~----------~~~~pG~i~~~~~~~ 266 (660)
T 1z7e_A 197 CFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHA----------SKAQPGSVISVAPLL 266 (660)
T ss_dssp CCCCCCGGGGBCCTTSBHHHHHHHHHHTCTTSCCEEEEETTEEEEEEECCEECCC----------CSSCTTSEEEETTEE
T ss_pred cCCCCCHHHcEeCCCCCHHHHHHHHhccCCCCCceEEEECCEEEEEEEEEEcccc----------CCCCCcEEEecCcEE
Confidence 56665 899999999999999999999 59999999999999999998774321 113466443 34599
Q ss_pred EEeCCCceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 80 FTGSDGQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
|.|+|| .| .|.++| +|||.|++.+|.++.
T Consensus 267 v~~~~g-~~-------------------------------~i~~~q~~g~~~m~a~d~l~g~ 296 (660)
T 1z7e_A 267 IACGDG-AL-------------------------------EIVTGQAGDGITMQGSQLAQTL 296 (660)
T ss_dssp EECSBS-EE-------------------------------EECEEEETTSCCEEHHHHHHTT
T ss_pred EEeCCC-eE-------------------------------EEEEeccCCCCcccHHHHHhhc
Confidence 999999 79 999999 999999999999874
|
| >1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1 | Back alignment and structure |
|---|
Probab=98.46 E-value=1e-07 Score=98.23 Aligned_cols=49 Identities=22% Similarity=0.172 Sum_probs=44.3
Q ss_pred ccCcc--ceeeeeCcccHHHHHHHhccCC--CCcceEEEECCeEEEEEEEEec
Q psy15158 4 FDDAI--SITVIKFNLKGEEIHNFIRGLD--SSPGASTVLNGIEVKVFASSMW 52 (709)
Q Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~ir~~~--~~p~a~~~~~~~~~~~~~~~~~ 52 (709)
|+.++ +++.|||++++++|+|+|||++ |||||||.++|+++|||+++..
T Consensus 191 y~~k~~k~d~~Idw~~~a~~I~~~IRa~~~~p~PgA~t~~~g~~~ki~~a~~~ 243 (260)
T 1zgh_A 191 VFQRRKPEQSEISPDFDLEKIYDYIRMLDGEGYPRAFIKYGKYRLEFSRASMK 243 (260)
T ss_dssp EECCCCGGGGBCCTTSCHHHHHHHHHHTCSTTCCCCEEEETTEEEEEEEEEEE
T ss_pred eeecCCHHHcEECcccCHHHHHHHHHhhCCCCCCcEEEEECCEEEEEEEEEEc
Confidence 44444 8999999999999999999997 9999999999999999998873
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=97.98 E-value=5.1e-06 Score=72.04 Aligned_cols=71 Identities=20% Similarity=0.299 Sum_probs=62.6
Q ss_pred hhhhHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhhc
Q psy15158 153 EAIIPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIEV 223 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~~ 223 (709)
..+...|+.||+.+|.. +|..++|||..|+.|+..++|+.++++.+++++.-.++|-+++..++...+...
T Consensus 15 ~~~e~~l~~i~~~vL~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~ 86 (93)
T 4i4d_A 15 RALERDIAAIWAETLGRDSVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHAT 86 (93)
T ss_dssp HHHHHHHHHHHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHH
Confidence 34556689999999997 799999999999999999999999999999999999999999998887766543
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=97.91 E-value=8.8e-06 Score=70.35 Aligned_cols=65 Identities=18% Similarity=0.357 Sum_probs=57.5
Q ss_pred HHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 157 PVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..|+.+|+.+|.. +|..++|||..|..|+..+||+.++++.+++++.-.++|-+++..++.....
T Consensus 17 ~~l~~i~~~vL~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~ 82 (91)
T 1dny_A 17 SKLAEIWERVLGVSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 82 (91)
T ss_dssp HHHHHHHHHHHTCSSCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHH
Confidence 3469999999987 7999999999999999999999999999999988889998888887766554
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00033 Score=59.05 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=58.8
Q ss_pred HhhhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 152 EEAIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
...+...|+.+|+.+|.. +|+.+++||..|..|++.++|+.++++.+++++.-..+|-+++..++...+
T Consensus 12 ~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l 83 (88)
T 2afd_A 12 VEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRL 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHH
Confidence 345667789999999974 789999999999999999999999999999888888888777777765544
|
| >2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0005 Score=57.31 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=60.0
Q ss_pred HhhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 152 EEAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+..+.+.++.+|+.+|.. +|..+++|| ..|..|++.++|+-++++.+++++.-++++-.++..++.....
T Consensus 5 ~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 78 (82)
T 2cnr_A 5 QEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYIL 78 (82)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHH
Confidence 445677899999999975 689999998 9999999999999999999999988888887777777766554
|
| >2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00024 Score=58.37 Aligned_cols=68 Identities=28% Similarity=0.351 Sum_probs=58.6
Q ss_pred hhHHHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
+.+.++.+|+.+|.. +|..+++| +..|..|++.++|+.++++.+++++.-++++-.++..++......
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~ 73 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKE 73 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHH
Confidence 456789999999875 68999999 999999999999999999999999988888877887777665543
|
| >2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00049 Score=57.38 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=59.6
Q ss_pred hhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 153 EAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..+.+.++.+|+.+|.. +|..+++|| ..|..|++.++|+-++++.+++++.-++++-.++.+++.....
T Consensus 5 ~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 77 (81)
T 2lol_A 5 DKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIK 77 (81)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHH
Confidence 34667899999999975 789999997 9999999999999999999999999888887788877765553
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00044 Score=59.48 Aligned_cols=71 Identities=20% Similarity=0.188 Sum_probs=60.7
Q ss_pred hhHhhhhHHHHHHHhhhcc----cCcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 150 ESEEAIIPVLKTIWAGILN----SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
+....+.+.++.+|+.+|. .+|+.+++||..|.+|++.++|+..+++.+++++.-..+|-+++..++...+
T Consensus 16 ~~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l 90 (95)
T 2ju1_A 16 ERTAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFL 90 (95)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHH
Confidence 3445677889999999998 3799999999999999999999999999999998888888888877765443
|
| >2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0009 Score=55.91 Aligned_cols=68 Identities=21% Similarity=0.276 Sum_probs=58.5
Q ss_pred hhhHHHHHHHhhhccc----CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 154 AIIPVLKTIWAGILNS----EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.+.+.++.+|+.+|.. +|..+++|+..|..|++.++|+-++.+.+++++.-++++-.++..++...+.
T Consensus 4 ~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 75 (82)
T 2ava_A 4 ETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIE 75 (82)
T ss_dssp HHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHH
Confidence 3567789999999864 5899999999999999999999999999999998888887778777765553
|
| >1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00052 Score=56.79 Aligned_cols=67 Identities=22% Similarity=0.320 Sum_probs=58.2
Q ss_pred hhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+.++.+|+.+|.. +|..+++|| ..|..|++.++|+-++.+.+++++.-++++-.++..++.....
T Consensus 4 i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~ 74 (78)
T 1l0i_A 4 IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYIN 74 (78)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHH
Confidence 456789999999864 789999998 9999999999999999999999998888887788888766554
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00055 Score=58.08 Aligned_cols=68 Identities=13% Similarity=0.212 Sum_probs=59.1
Q ss_pred hhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceecc--ccccccchhhhhHHhHh
Q psy15158 154 AIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQN--EDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n--e~v~~~~~f~~f~~~~r 221 (709)
.+...++.+|..+|.. +|+.+++||..|..|++.++|+.++++.+++++.- ..++-+++..++...+.
T Consensus 11 ~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~ 83 (89)
T 2kr5_A 11 EKLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFML 83 (89)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHH
Confidence 4556689999999975 78999999999999999999999999999988887 88888888888766554
|
| >2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00077 Score=59.77 Aligned_cols=56 Identities=18% Similarity=0.359 Sum_probs=48.8
Q ss_pred hhhhHHHHHHHhhhcc-----cCcCCCccccccCCCcchhHHHHHHHHhhcCceecccccc
Q psy15158 153 EAIIPVLKTIWAGILN-----SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVL 208 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~ 208 (709)
..+.+.|+.+|+.+|. .+|..+++||..|..|+|+++|+-++.+.+++++..++++
T Consensus 21 ~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~ 81 (105)
T 2jq4_A 21 GHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLN 81 (105)
T ss_dssp --CHHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHS
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhh
Confidence 3466779999999874 3789999999999999999999999999999999888776
|
| >1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00086 Score=55.52 Aligned_cols=68 Identities=22% Similarity=0.347 Sum_probs=57.9
Q ss_pred hhhhHHHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 153 EAIIPVLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
..+.+.++.+|+.+|.. +|..+++| +..|..|++.++|+-++++.+++++.-++++-.++..++....
T Consensus 4 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i 75 (80)
T 1x3o_A 4 QEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYI 75 (80)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHH
Confidence 45667899999999974 78999999 9999999999999999999999998888887667777765544
|
| >2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0013 Score=57.43 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=60.2
Q ss_pred ccChhHhhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 147 VLTESEEAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.+|.+ .+.+.|+.+|+.+|.. +|..+++|| .-|..|++.++|+-++++.+++++.-++++-.++..++...+.
T Consensus 10 ~m~~~--~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~ 86 (99)
T 2dnw_A 10 PLTLE--GIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIA 86 (99)
T ss_dssp CCCHH--HHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHH
T ss_pred CCCHH--HHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHH
Confidence 34444 3567799999998853 899999997 9999999999999999999999998888887777777665554
|
| >2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00091 Score=56.00 Aligned_cols=71 Identities=17% Similarity=0.346 Sum_probs=59.4
Q ss_pred hHhhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 151 SEEAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+...+.+.++.+|+.+|.. +|..+++|| ..|..|++.+.|+-++++.+++++.-++++-.++..++...+.
T Consensus 4 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 78 (82)
T 2qnw_A 4 DDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIE 78 (82)
T ss_dssp CSHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHH
Confidence 4456778899999999864 799999996 9999999999999999999999998888876777777655543
|
| >1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0026 Score=53.15 Aligned_cols=55 Identities=24% Similarity=0.331 Sum_probs=48.1
Q ss_pred hhhHHHHHHHhhhccc---CcCCCccccccC-CCcchhHHHHHHHHhhcCceecccccc
Q psy15158 154 AIIPVLKTIWAGILNS---EVSEDTDFFQSG-AGSMDVVRLIEEIKENLQITLQNEDVL 208 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ne~v~ 208 (709)
.+.++|+.+.+.++.. +|..+|+||..| ..|+|++.|+-++.+.+++++..+++.
T Consensus 4 ~i~~~i~~il~~~~~~~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~ 62 (80)
T 1dv5_A 4 AIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFD 62 (80)
T ss_dssp HHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCC
T ss_pred HHHHHHHHHHHHHhCCCcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcC
Confidence 4667788998888864 568899999999 999999999999999999999887765
|
| >2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0022 Score=53.80 Aligned_cols=69 Identities=17% Similarity=0.269 Sum_probs=59.0
Q ss_pred hhhhHHHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 153 EAIIPVLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..+.+.++.+|+.+|.. +|..+++| ...|..|++.+.|+-++++.+++++.-+++.-.++..++...+.
T Consensus 8 ~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 80 (84)
T 2kwl_A 8 DEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIK 80 (84)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHH
Confidence 45677899999999864 79999999 89999999999999999999999998888877777777665543
|
| >3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0017 Score=54.29 Aligned_cols=69 Identities=23% Similarity=0.386 Sum_probs=59.0
Q ss_pred hhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 153 EAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..+.+.++.+|+.+|.. +|..+|+|| .-|..|++.+.|+-++.+.+++++..+++.-.++.+++...+.
T Consensus 4 ~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 76 (81)
T 3gzm_A 4 KSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIE 76 (81)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHH
Confidence 34667899999998865 789999997 9999999999999999999999999888877777777765554
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0018 Score=55.86 Aligned_cols=68 Identities=22% Similarity=0.279 Sum_probs=58.1
Q ss_pred hhhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 153 EAIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
..+...|+.+|..+|.. +|..+++||..|.+|++.++|+.++++.+++++.-..+|-+++..++...+
T Consensus 20 ~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l 90 (99)
T 2liu_A 20 SEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYI 90 (99)
T ss_dssp HHHHHHHHHHHHHHTTSCGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHH
Confidence 44667789999999974 789999999999999999999999999999988888888777777765544
|
| >1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0015 Score=54.41 Aligned_cols=67 Identities=21% Similarity=0.336 Sum_probs=57.0
Q ss_pred hhhHHHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 154 AIIPVLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
.+.+.++.+|+.+|.. +|..+++| +..|..|++.+.|+-++++.+++++.-++++-.++.+++...+
T Consensus 7 ~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i 77 (81)
T 1f80_D 7 DTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYI 77 (81)
T ss_dssp HHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHH
Confidence 4667799999999864 79999999 9999999999999999999999999888877667777765544
|
| >1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0022 Score=55.55 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=56.0
Q ss_pred hHHHHHHHhhhccc-------CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 156 IPVLKTIWAGILNS-------EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 156 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.++|+.+|..+|.. +|..+++|+..|..|+++++|+-++.+.+++++.-+.++-.++..++...+.
T Consensus 6 ~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~ 78 (95)
T 1nq4_A 6 LSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTN 78 (95)
T ss_dssp HHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHH
Confidence 45688999998874 4888999999999999999999999999999999888887777777655553
|
| >3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0029 Score=55.16 Aligned_cols=68 Identities=22% Similarity=0.317 Sum_probs=57.7
Q ss_pred hhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 154 AIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.+.+.|+.+|+.+|.. +|..+++|| .-|..|+|.+.|+-++.+.+++++..+++.-.+++.++...+.
T Consensus 22 ~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~ 93 (97)
T 3ejb_A 22 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYIN 93 (97)
T ss_dssp CHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHH
Confidence 3566789999998865 799999998 9999999999999999999999999888876677777665554
|
| >1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0023 Score=57.50 Aligned_cols=72 Identities=15% Similarity=0.286 Sum_probs=61.1
Q ss_pred hHhhhhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 151 SEEAIIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
....+.+.|+.+|+.+|.. +|..+++|| ..|.+|++.+.|+-++++.+++++.-++++-.++.+++...+..
T Consensus 4 ~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 79 (115)
T 1klp_A 4 TQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQK 79 (115)
T ss_dssp CHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 3456778899999999864 789999997 99999999999999999999999988888877788877665543
|
| >2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.00097 Score=55.17 Aligned_cols=67 Identities=21% Similarity=0.241 Sum_probs=57.1
Q ss_pred hhHHHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+.++.+|+.+|.. +|..+++| +.-|..|++.++|+-++++.+++++.-++++-.++..++.....
T Consensus 5 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 75 (79)
T 2l3v_A 5 TAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFID 75 (79)
T ss_dssp HHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHH
T ss_pred HHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHH
Confidence 566789999999975 79999999 99999999999999999999999888888877777777655543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0022 Score=67.70 Aligned_cols=66 Identities=14% Similarity=0.318 Sum_probs=59.0
Q ss_pred HHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 157 PVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
..|+.||+.+|.. +|..++|||..|..|+..+||+.++++.+++++.=.++|-+++..++...+..
T Consensus 14 ~~l~~~~~~~l~~~~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~ 80 (329)
T 3tej_A 14 TIIAAAFSSLLGCDVQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDA 80 (329)
T ss_dssp HHHHHHHHHHHTC-CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHh
Confidence 3469999999987 79999999999999999999999999999998888899999998888776653
|
| >1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0031 Score=52.78 Aligned_cols=67 Identities=21% Similarity=0.260 Sum_probs=56.7
Q ss_pred hhHHHHHHHhhhccc----CcC--CCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 155 IIPVLKTIWAGILNS----EVS--EDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+.++.+|+.+|.. +|. .+++|+..|..|++.++|+-++.+.+++++.-++++-.++..++...+.
T Consensus 5 ~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 77 (83)
T 1or5_A 5 TVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVN 77 (83)
T ss_dssp CHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHH
Confidence 456789999999875 466 8889999999999999999999999999998888877777777766554
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0084 Score=59.41 Aligned_cols=71 Identities=15% Similarity=0.248 Sum_probs=62.1
Q ss_pred hHhhhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 151 SEEAIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
....+...|+.+|..+|.. +|+.+++||..|.+|++.++|+.++++.+++++.-..+|-+++..++...+.
T Consensus 127 ~~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~ 200 (212)
T 2l22_A 127 QRESIQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVD 200 (212)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHH
Confidence 4466778899999999974 7889999999999999999999999999999998899998888888766554
|
| >4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.006 Score=53.60 Aligned_cols=76 Identities=21% Similarity=0.288 Sum_probs=60.3
Q ss_pred cccChhHhhhhHHHHHHHhhhccc---CcCCCccc-cccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 146 LVLTESEEAIIPVLKTIWAGILNS---EVSEDTDF-FQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+-+|..+..+.+.|+.+.+.+|.. +|.++|+| ..-|.+|+|.+.|+-++.+.+++++..+++.-.+++.++...+.
T Consensus 18 ~~~~m~~mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~ 97 (101)
T 4dxe_H 18 LYFQSNAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFIN 97 (101)
T ss_dssp ------CTTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHH
Confidence 344545567888899999999865 78999999 89999999999999999999999999988876777777665543
|
| >1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.012 Score=49.43 Aligned_cols=67 Identities=9% Similarity=0.059 Sum_probs=56.3
Q ss_pred hhHHHHHHHhhhccc-------CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 155 IIPVLKTIWAGILNS-------EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+.++.+|+.+|.. +|..+++|+..|..|++.+.|+-++++.+++++.-+++.-.++++++...+.
T Consensus 6 ~~~~l~~il~~~l~~~~~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 79 (86)
T 1af8_A 6 TTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN 79 (86)
T ss_dssp CHHHHHHHHHTTCCCCSCCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHH
Confidence 456689999999864 3567899999999999999999999999999999888887777777665553
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0068 Score=60.10 Aligned_cols=68 Identities=21% Similarity=0.356 Sum_probs=58.6
Q ss_pred hhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 154 AIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.+...|+.+|+.+|.. +|+.+++||..|.+|++.++|+.++++.+++++.-..+|-.++..++...+.
T Consensus 26 ~i~~~l~~~~a~~l~~~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~ 96 (212)
T 2l22_A 26 ECAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVG 96 (212)
T ss_dssp HHHHHHHHHHHHHTTCCTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHH
Confidence 4566789999999975 7999999999999999999999999999999998888887777777655554
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=95.25 E-value=4.3 Score=44.06 Aligned_cols=230 Identities=17% Similarity=0.222 Sum_probs=132.6
Q ss_pred CCCceeeeecccCEEEEECCCC---chHHHHHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEec
Q psy15158 381 NSNFTFTKREPIGVCGLITPWN---YPLMMLSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILP 455 (709)
Q Consensus 381 ~~~~~~~~~~P~GVv~~I~PwN---fPl~~~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~ 455 (709)
++.....++.|+--|++..|.- ||-..+ ...+||-.+|+. |+.-|.+.-- ..-.+.-..+.+|+- .+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G~-i~p~iL~AA~l~Gv~----eIy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRGE-LNALVLAAAYISGVD----RVFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGGC-CCHHHHHHHHHHTCC----EEEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCCC-ccHHHHHHHHhcCCc----EEEE
Confidence 3445567788999999999954 665544 467889999985 4455553211 112233334556654 3443
Q ss_pred CCchhHHHHHHh----CCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE-EEcCCCCHHHHHHHHHhhhhcc
Q psy15158 456 GTGAVTGEAISQ----HLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL-VIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 456 g~g~~~g~~L~~----~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~-IV~~dADle~Aa~~iv~saf~~ 530 (709)
-.|...-.+|.- -|.|++|.=.|..-+... |.... ...-+=+.-|-.--+ |-|++||++.++.+++.-+=+.
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd 269 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD 269 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-CCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence 335544445544 688999999998766432 22221 111111222322333 3356799999999999876554
Q ss_pred CCCcccCCcEEEEeCccHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHh-cCCEEEECCccCCCCCCHHHHHHHHhcC
Q psy15158 531 KGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN-HKAHLDKLIDYCEKAKS-EGARLLIGGKRLDRPGDVDAVIKRANST 608 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~-~~~~~~~i~~~i~~a~~-~Ga~vl~GG~~~~~~gdldeaI~~~N~t 608 (709)
.. .+.++|..+ ++|.+.+.+++.+.. .-.+. +.+..+.. .|.-+++ .|++|+++++|..
T Consensus 270 ~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~r~----~i~~~sl~~~g~ii~v--------~~~~ea~~~~N~~ 330 (423)
T 4gic_A 270 ED-----AQAILISPD--AAHLEAVQASIERLLPGMERA----EVIRTSLERRGGMILV--------DDLEQAAAVANRI 330 (423)
T ss_dssp TT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCTTH----HHHHHHHHHHCEEEEC--------SSHHHHHHHHHHH
T ss_pred CC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCccH----HHHHHHHhcCceEEEE--------eehHHHHHHHHhh
Confidence 32 445677666 466666666665441 10111 12223333 3433332 2789999999973
Q ss_pred CCCCeEEEEccchHHHHHHHHhcC-eeeEEEcCCC
Q psy15158 609 EYGLASGIFTSDINKAMYFVDKID-SGTVFINTYN 642 (709)
Q Consensus 609 ~yGLta~V~T~d~~~a~~va~~l~-aG~V~VN~~~ 642 (709)
- .=-.-|.++|.. .+..+++ +|.|++-.++
T Consensus 331 A-PEHLel~~~~~~---~~l~~i~nAGaIFlG~~t 361 (423)
T 4gic_A 331 A-PEHLELSVESPE---VLVESIRNAGAIFMGRYT 361 (423)
T ss_dssp C-CSEEEEESSCHH---HHGGGCCCCSEEEEC---
T ss_pred C-hHHhhhhhCCHH---HHHhhCcEeceeecCCCC
Confidence 2 123678888864 4556665 9999998764
|
| >1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=94.93 E-value=0.031 Score=48.91 Aligned_cols=73 Identities=19% Similarity=0.333 Sum_probs=61.3
Q ss_pred hhHhhhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 150 ESEEAIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
.|+..+.+.|+.+-+.+|.. +|..+++|..-|..|++.+.|+-++.+.+++++..+++.-.+++.++...+..
T Consensus 13 ~~~~~i~~~l~~ila~~l~v~~~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~ 88 (100)
T 1vku_A 13 MERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIK 88 (100)
T ss_dssp THHHHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 46677788889998888863 78999999999999999999999999999999988887767777776655543
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.024 Score=63.31 Aligned_cols=71 Identities=20% Similarity=0.380 Sum_probs=61.2
Q ss_pred cChhHhhhhHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 148 LTESEEAIIPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
-|+-|+. |..||+.+|.. +|..+.|||..|..|+..+||+-++++..++++.=.++|.+++..++......
T Consensus 8 ~~~~e~~----l~~iw~~vL~~~~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~ 79 (520)
T 2jgp_A 8 RSVWEAR----LAQVWEQVLNVPQVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEE 79 (520)
T ss_dssp CSHHHHH----HHHHHHHHHTCSCCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHH
T ss_pred CCHHHHH----HHHHHHHHhCCCCCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHh
Confidence 4555544 58999999987 89999999999999999999999999998888888899999999988776654
|
| >2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=93.52 E-value=0.0066 Score=53.53 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=56.3
Q ss_pred hhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhH
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~ 220 (709)
+.+.|+.+|+.+|.. +|..+++|+.-|.+|+|.+.|+-++.+.+++++.-++++-.+++.++...+
T Consensus 27 i~~~l~~ila~~l~i~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I 95 (103)
T 2lte_A 27 MEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLV 95 (103)
Confidence 778899999998864 789999999999999999999999999999999888877666666655444
|
| >2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.056 Score=47.70 Aligned_cols=64 Identities=14% Similarity=0.332 Sum_probs=47.2
Q ss_pred hHHHHHHHhhhcc-----cCcCCCccccc-cCC-CcchhHHHHHHHHhhcCceeccccccc--cchhhhhHHh
Q psy15158 156 IPVLKTIWAGILN-----SEVSEDTDFFQ-SGA-GSMDVVRLIEEIKENLQITLQNEDVLM--SSVFRDFYIK 219 (709)
Q Consensus 156 ~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ne~v~~--~~~f~~f~~~ 219 (709)
.++|+.+=+.+|. .+|.++|+|+. .|. +|+|++.||-++.+.+++++..+++.. -.++.++...
T Consensus 26 ~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~ 98 (105)
T 2lki_A 26 LEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALF 98 (105)
T ss_dssp HHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHH
Confidence 3445555555443 37889999996 999 999999999999999999999888542 3445554433
|
| >2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.031 Score=47.17 Aligned_cols=68 Identities=21% Similarity=0.263 Sum_probs=55.1
Q ss_pred hhhHHHHHHHhhhc---c---cCcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 154 AIIPVLKTIWAGIL---N---SEVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 154 ~~~~~~~~~~~~~~---~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.+.+.++.+-+.+| . .+|..+++|+ .-|..|+|.+.|+-++.+.+++++..+++.-.++..++...+.
T Consensus 8 ~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~ 82 (88)
T 2l4b_A 8 EIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIA 82 (88)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHH
Confidence 46677888888888 2 3899999995 8899999999999999999999998887766666666655443
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.0085 Score=67.15 Aligned_cols=65 Identities=15% Similarity=0.371 Sum_probs=0.0
Q ss_pred HHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 157 PVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
..|..||+.+|.. +|..+.|||..|+.|+-.+||+..+++ .++++.=.++|-+++..++.+.+..
T Consensus 48 ~~l~~~w~~~l~~~~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~ 113 (508)
T 4f6l_B 48 QTFVDVFGEVLKQNDVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQ 113 (508)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHh
Confidence 3469999999997 799999999999999999999999986 7788888899999999988776654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.048 Score=68.23 Aligned_cols=66 Identities=18% Similarity=0.369 Sum_probs=59.3
Q ss_pred HHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 157 PVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
+.|..||+.+|.. +|.-+.|||..|..|+..+||+.++++.+++++.-.++|.+++..++...+..
T Consensus 975 ~~l~~~~~~vL~~~~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~ 1041 (1304)
T 2vsq_A 975 ETIAQIWSEVLGRKQIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKN 1041 (1304)
T ss_dssp HHHHHHHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHh
Confidence 3469999999987 78999999999999999999999999999999999999999999888776653
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=94.08 E-value=0.0091 Score=68.85 Aligned_cols=65 Identities=20% Similarity=0.309 Sum_probs=0.0
Q ss_pred HHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHh-hcCceeccccccccchhhhhHHhHhh
Q psy15158 158 VLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKE-NLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 158 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
.|+.||+.+|.. .|..+.|||..|..|+-.+||+..+++ ..++++.=.++|.+++..++...++.
T Consensus 528 ~l~~iw~~vL~~~~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~ 594 (620)
T 4dg8_A 528 GCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRS 594 (620)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCCCCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHh
Confidence 468999999987 688899999999999999999999988 77888888899999998887665543
|
| >2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=93.81 E-value=0.054 Score=48.51 Aligned_cols=68 Identities=22% Similarity=0.341 Sum_probs=55.9
Q ss_pred HhhhhHHHHHHHhhhcccCcCCCcccc-ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 152 EEAIIPVLKTIWAGILNSEVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
...+.+.|+.+.+.+|. |..+++|+ ..|.+|+|++.|+-++.+.+++++..+++.--.++.++...+.
T Consensus 28 ~~ei~~~v~~il~e~l~--I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~ 96 (113)
T 2cgq_A 28 EEAINATIQRILRTDRG--ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVA 96 (113)
T ss_dssp HHHHHHHHHHHHTCCSC--CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC--CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHH
Confidence 34577778888888887 99999995 7999999999999999999999998888765566666555554
|
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=93.80 E-value=0.12 Score=58.01 Aligned_cols=45 Identities=31% Similarity=0.685 Sum_probs=38.8
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++++.++|++|.+.......||||.|.||+|++++.
T Consensus 423 d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~ 467 (490)
T 2wme_A 423 DLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGL 467 (490)
T ss_dssp BHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHH
Confidence 356788999999999999998666667899999999999998764
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=93.38 E-value=11 Score=41.08 Aligned_cols=239 Identities=17% Similarity=0.190 Sum_probs=139.5
Q ss_pred CCceeeeecccCEEEEECCC---CchHHHHHHHHHHHHHcCCE--EEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecC
Q psy15158 382 SNFTFTKREPIGVCGLITPW---NYPLMMLSWKMAPCLAAGNT--VVMKPSEVSPLTALKLAELSVRAGFPKGVINILPG 456 (709)
Q Consensus 382 ~~~~~~~~~P~GVv~~I~Pw---NfPl~~~~~~iapALaaGNt--VVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g 456 (709)
|.....+..|+--|++..|. -||-..+ ...+||-.+|+. |+.-|....|.+ .-..+.+|+.+ +..-
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~i~p~i----L~AA~l~Gv~e----Iy~v 184 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQD----VFNV 184 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHHH-HHHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCCE----EEEC
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHHH-HhhccHhhcCCCeEEEECCCCCCHHH----HHHHHHcCCCE----Eeec
Confidence 44455678899999999997 4665444 456888999984 445565334433 23345666553 3332
Q ss_pred CchhHHHHHHh----CCCccEEEEcCChHHHHHHHHHHHhcCCCcEEE-cCCCccc--EEEcCCCCHHHHHHHHHhhhhc
Q psy15158 457 TGAVTGEAISQ----HLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSL-ELGGKSP--LVIFDDYNLDKAVRMSMGGVFF 529 (709)
Q Consensus 457 ~g~~~g~~L~~----~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~l-ElGGknp--~IV~~dADle~Aa~~iv~saf~ 529 (709)
.|...-.+|.- -|.||+|.=.|..-+.. .|.......-.|-. -..|-+= +|-|++||++.++.+++.-+=+
T Consensus 185 GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~--AKr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 185 GGAQAIAALAFGTESVPKVDKIFGPGNAFVTE--AKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHH--HHHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHcCCCCCCCccEEECCCcHHHHH--HHHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 24444444433 58899999888875533 22222101111111 1123333 3346679999999999977654
Q ss_pred cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCHHHHHHHHhcC
Q psy15158 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN-HKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVDAVIKRANST 608 (709)
Q Consensus 530 ~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l~-~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~gdldeaI~~~N~t 608 (709)
.. ..+.++|..| +++.+++.+++.+.. .-.+ .+.++.++... .++.- .|++|+++++|..
T Consensus 263 d~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~lpr----~~ia~~sl~~~-~ii~v-------~~l~ea~~~~N~~ 323 (434)
T 1kae_A 263 GP-----DSQVILLTPA--ADMARRVAEAVERQLAELPR----AETARQALNAS-RLIVT-------KDLAQCVEISNQY 323 (434)
T ss_dssp CT-----TCEEEEEESC--HHHHHHHHHHHHHHHTTCTT----HHHHHHHHTTC-EEEEC-------SSHHHHHHHHHHH
T ss_pred CC-----CCcEEEEECC--HHHHHHHHHHHHHHHHhCCh----HHHHHHHHHcC-eEEEE-------CCHHHHHHHHHHh
Confidence 43 2445666665 455555555554430 0011 13445555544 44431 2799999999974
Q ss_pred CCCCeEEEEccchHHHHHHHHhcC-eeeEEEcCCCC---------CCCCCCCCCCC
Q psy15158 609 EYGLASGIFTSDINKAMYFVDKID-SGTVFINTYNK---------TDVAAPFGGFK 654 (709)
Q Consensus 609 ~yGLta~V~T~d~~~a~~va~~l~-aG~V~VN~~~~---------~~~~~PFGG~k 654 (709)
-- =-.-|.++|.. .+..+++ +|.|++..++. ....+|-+|..
T Consensus 324 AP-EHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~A 375 (434)
T 1kae_A 324 GP-EHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYT 375 (434)
T ss_dssp CC-SEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGG
T ss_pred hh-HhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCce
Confidence 21 24678888874 4455555 99999997653 23457877654
|
| >3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma} | Back alignment and structure |
|---|
Probab=92.98 E-value=0.097 Score=46.26 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=56.2
Q ss_pred HhhhhHHHHHHHhhhccc--CcCCCcccc------ccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 152 EEAIIPVLKTIWAGILNS--EVSEDTDFF------QSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
...+.+.|+.+=+.+|.. +|..+++|+ .-|..|+|++.|+-++.+.+++++..+++.--.+++++...+.
T Consensus 17 ~~~i~~~i~~il~e~l~~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~ 94 (107)
T 3ce7_A 17 INAVTNYIVGMCQKFLQKGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFVV 94 (107)
T ss_dssp HHHHHHHHHHHHHTTBCTTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHHH
Confidence 345667778887777753 789999998 5579999999999999999999999888776677777665554
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.54 E-value=0.073 Score=60.95 Aligned_cols=64 Identities=11% Similarity=0.196 Sum_probs=53.7
Q ss_pred HHHHHHHhhhccc--CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 157 PVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 157 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
..++.+|+.+|.. +|..+.|||..|..|.-.+||+..+++. ..++.=.++|.+++..++.+.+.
T Consensus 548 ~~l~~~~~~~l~~~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~~-~~~~~~~~~~~~pti~~la~~l~ 613 (617)
T 3rg2_A 548 AALREVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 613 (617)
T ss_dssp HHHHHHHGGGSCTTCCCCTTSCGGGGTCCHHHHHHHHHHHHTT-STTCCHHHHHHSCCHHHHHHHHC
T ss_pred HHHHHHHHHHhccCCCCCCCCChhhcCccHHHHHHHHHHHHHh-cCCCCHHHHhcCCCHHHHHHHHH
Confidence 4579999999953 7888999999999999999999999874 56777788998888888766554
|
| >1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=92.37 E-value=0.057 Score=46.15 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=26.0
Q ss_pred hhHHHHHHHhhhccc-----------CcCCCccccccCCCcchhHHHHHHHHhhcCceec---cccccccchhhhhHHhH
Q psy15158 155 IIPVLKTIWAGILNS-----------EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQ---NEDVLMSSVFRDFYIKV 220 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---ne~v~~~~~f~~f~~~~ 220 (709)
+.++++.+-+.++.. +|..+++|+.-|..|+|++.|+-++.+.+++++. .+...-.++++++...+
T Consensus 5 i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~i 84 (92)
T 1fh1_A 5 LTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAV 84 (92)
T ss_dssp CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTHHH
T ss_pred HHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHHH
Confidence 445567777777752 6889999999999999999999999999998887 55555455555554444
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=91.80 E-value=0.43 Score=53.53 Aligned_cols=45 Identities=40% Similarity=0.808 Sum_probs=38.6
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...+.++.++++.++|++|.+.......||||.|.||+|++.+.+
T Consensus 437 ~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~ 481 (503)
T 1a4s_A 437 ISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQA 481 (503)
T ss_dssp HHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTG
T ss_pred HHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHH
Confidence 567889999999999999986656677999999999999887754
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=91.77 E-value=0.1 Score=58.29 Aligned_cols=46 Identities=37% Similarity=0.572 Sum_probs=39.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...++++.++++.++|++|.+....+..||||.|+||+|++.+.+
T Consensus 424 d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~ 469 (484)
T 3ifg_A 424 DIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHY 469 (484)
T ss_dssp BHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTT
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHH
Confidence 4567889999999999999987666778999999999999987754
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=91.72 E-value=0.37 Score=54.42 Aligned_cols=45 Identities=29% Similarity=0.654 Sum_probs=38.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+....+..||||.|.||+|++.+.
T Consensus 438 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~ 482 (528)
T 3u4j_A 438 NLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGR 482 (528)
T ss_dssp BHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTT
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchH
Confidence 456788999999999999998766677899999999999998765
|
| >2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A | Back alignment and structure |
|---|
Probab=91.65 E-value=0.19 Score=43.75 Aligned_cols=52 Identities=19% Similarity=0.261 Sum_probs=43.5
Q ss_pred hhHHHHHHHhhhccc---CcCCCcccc-ccCCCcchhHHHHHHHHhhcCceecccc
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFF-QSGAGSMDVVRLIEEIKENLQITLQNED 206 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ne~ 206 (709)
+.+.++.+-+.+|.. +|..+++|| .-|..|+|.+.|+-++.+.+++++..+.
T Consensus 4 i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~ 59 (101)
T 2kw2_A 4 TFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEK 59 (101)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHH
Confidence 455677777777743 788999996 8899999999999999999999887765
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=91.57 E-value=0.4 Score=54.03 Aligned_cols=46 Identities=48% Similarity=0.821 Sum_probs=39.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.++++.++|++|......+..||||.|.||+|++.+.+
T Consensus 428 d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~ 473 (517)
T 3r31_A 428 DLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAA 473 (517)
T ss_dssp CHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGG
T ss_pred CHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHH
Confidence 3567889999999999999987666788999999999999887653
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=91.49 E-value=0.12 Score=58.00 Aligned_cols=46 Identities=33% Similarity=0.522 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+++..++|++|.+....+..||||.|.||+|++.+.+
T Consensus 442 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~ 487 (504)
T 3ek1_A 442 NFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKY 487 (504)
T ss_dssp BHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTT
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHH
Confidence 3567889999999999999987666778999999999999887754
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=91.48 E-value=0.3 Score=54.87 Aligned_cols=45 Identities=31% Similarity=0.648 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+.......||||.|.||+|++++.
T Consensus 429 d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~ 473 (503)
T 3iwj_A 429 DLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGE 473 (503)
T ss_dssp CHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHH
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchH
Confidence 456788999999999999998766667899999999999988764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=91.42 E-value=0.24 Score=55.63 Aligned_cols=44 Identities=30% Similarity=0.414 Sum_probs=37.3
Q ss_pred hHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.++++.++|++|.+.. .....||||.|.||+|++++.
T Consensus 423 ~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~ 467 (505)
T 3prl_A 423 TDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIK 467 (505)
T ss_dssp HHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHH
T ss_pred HHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccH
Confidence 45678999999999999998654 567799999999999988764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=91.31 E-value=0.59 Score=52.90 Aligned_cols=45 Identities=24% Similarity=0.281 Sum_probs=37.8
Q ss_pred hHHHHHHHHHhceeEEEEe-ccCCC-CCCCCCCCCccCCCC-CCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFIN-TYNKT-DVAAPFGGFKQSGFG-KDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN-~~~~~-~~~~Pf~g~k~Sg~g-~~~~~~ 708 (709)
...+.++.+++..++|++| ..... ....||||.|.||+| ++.+.+
T Consensus 454 ~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~ 501 (538)
T 3qan_A 454 RAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPD 501 (538)
T ss_dssp HHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTT
T ss_pred HHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHH
Confidence 4567889999999999999 55543 788999999999999 887765
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=91.14 E-value=0.57 Score=52.49 Aligned_cols=45 Identities=27% Similarity=0.334 Sum_probs=38.4
Q ss_pred hHHHHHHHHHhceeEEEEecc-CCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTY-NKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~-~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...++++.+.++.++|++|.+ .......||||.|+||+|++.+.+
T Consensus 432 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~ 477 (501)
T 1uxt_A 432 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGY 477 (501)
T ss_dssp HHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTT
T ss_pred HHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHH
Confidence 467889999999999999976 445678999999999999987764
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=90.60 E-value=0.66 Score=52.00 Aligned_cols=45 Identities=38% Similarity=0.817 Sum_probs=38.5
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...++++.+++..++|++|......+..||||.|.||+|++.+.+
T Consensus 436 ~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~ 480 (500)
T 1o04_A 436 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEY 480 (500)
T ss_dssp HHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGG
T ss_pred HHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHH
Confidence 567889999999999999986655678999999999999887654
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=90.37 E-value=0.62 Score=52.38 Aligned_cols=45 Identities=29% Similarity=0.569 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.++.++|++|......+..||||.|.||+|++.+.
T Consensus 445 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~ 489 (515)
T 2d4e_A 445 DLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGT 489 (515)
T ss_dssp BHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHH
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchH
Confidence 346788999999999999997655567899999999999987654
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=90.14 E-value=0.12 Score=58.25 Aligned_cols=45 Identities=44% Similarity=0.787 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++++.++|++|.+....+..||||.|+||+|++.+.
T Consensus 450 d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~ 494 (520)
T 3ed6_A 450 DIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGK 494 (520)
T ss_dssp CHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchH
Confidence 356788999999999999998765568899999999999988764
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=89.95 E-value=0.13 Score=57.15 Aligned_cols=45 Identities=40% Similarity=0.767 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+.......||||.|.||+|++.+.
T Consensus 401 d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~ 445 (462)
T 3etf_A 401 DDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSH 445 (462)
T ss_dssp CHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHH
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchH
Confidence 356788999999999999998766677899999999999988764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=89.89 E-value=0.61 Score=52.19 Aligned_cols=44 Identities=30% Similarity=0.483 Sum_probs=37.5
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+++..++|++|.+....+..||||.|.||+|++.+.
T Consensus 436 ~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~ 479 (495)
T 1wnd_A 436 VGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 479 (495)
T ss_dssp HHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHH
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchH
Confidence 56788999999999999997655567899999999999987654
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=89.84 E-value=0.13 Score=57.82 Aligned_cols=45 Identities=24% Similarity=0.383 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+....+..||||.|+||+|++.+.
T Consensus 428 d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~ 472 (497)
T 3k2w_A 428 SFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGK 472 (497)
T ss_dssp BHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHH
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchH
Confidence 346788999999999999998765567899999999999987654
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.73 E-value=0.14 Score=57.14 Aligned_cols=45 Identities=33% Similarity=0.557 Sum_probs=38.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...++++.++++.+++++|.+.......||||.|.||+|++.+.
T Consensus 421 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 465 (481)
T 3jz4_A 421 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSK 465 (481)
T ss_dssp BHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchH
Confidence 456788999999999999998776677899999999999987654
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=89.60 E-value=0.68 Score=51.85 Aligned_cols=44 Identities=27% Similarity=0.325 Sum_probs=36.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|. ....+..||||.|.||+|++.+.
T Consensus 439 d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~ 482 (497)
T 3i44_A 439 DRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGL 482 (497)
T ss_dssp CHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHH
T ss_pred CHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchH
Confidence 456788999999999999994 44457799999999999987654
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=89.59 E-value=0.16 Score=56.62 Aligned_cols=45 Identities=27% Similarity=0.310 Sum_probs=37.7
Q ss_pred ChHHHHHHHHHhceeEEEEeccC--CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN--KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~--~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++++.++|++|.+. ...+..||||.|+||+|++.+.
T Consensus 386 d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~ 432 (469)
T 3sza_A 386 NDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGK 432 (469)
T ss_dssp CHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTH
T ss_pred CHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchH
Confidence 35678899999999999999865 2357799999999999998764
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=89.53 E-value=0.14 Score=57.36 Aligned_cols=45 Identities=42% Similarity=0.643 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+....+..||||.|+||+|++.+.
T Consensus 437 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~ 481 (498)
T 4f3x_A 437 DISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSV 481 (498)
T ss_dssp BHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHH
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchH
Confidence 346788999999999999998765568899999999999987664
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=89.29 E-value=0.16 Score=57.21 Aligned_cols=45 Identities=33% Similarity=0.428 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+....+..||||.|.||+|++.+.
T Consensus 424 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~ 468 (506)
T 3rh9_A 424 DAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGL 468 (506)
T ss_dssp CHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccH
Confidence 356788999999999999998766667899999999999987654
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=89.29 E-value=0.22 Score=55.62 Aligned_cols=46 Identities=30% Similarity=0.507 Sum_probs=38.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.+..++|++|.+.......||||.|.||+|++.+.+
T Consensus 426 d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~ 471 (487)
T 2w8n_A 426 DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKY 471 (487)
T ss_dssp CHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTT
T ss_pred CHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHH
Confidence 3567889999999999999986655567999999999999887764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=89.19 E-value=0.16 Score=57.33 Aligned_cols=44 Identities=82% Similarity=1.300 Sum_probs=37.8
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...++++.+++..++|++|.+....+..||||.|+||+|++.+.
T Consensus 458 ~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~ 501 (517)
T 2o2p_A 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGE 501 (517)
T ss_dssp HHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHH
T ss_pred HHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChH
Confidence 56788999999999999997655567899999999999987654
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.73 E-value=0.76 Score=50.97 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=34.1
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 702 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g 702 (709)
...+.++.++++.++|++|.+.......||||.|.||+|
T Consensus 372 ~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G 410 (463)
T 2h5g_A 372 ENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGIS 410 (463)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEE
T ss_pred HHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCC
Confidence 567889999999999999976555677999999999999
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=88.33 E-value=0.14 Score=57.17 Aligned_cols=45 Identities=38% Similarity=0.660 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++++.++|++|......+..||||.|.||+|++.+.
T Consensus 398 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~ 442 (484)
T 3ros_A 398 DIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSG 442 (484)
T ss_dssp CHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchH
Confidence 356788999999999999998666678899999999999987654
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=88.10 E-value=0.2 Score=55.96 Aligned_cols=44 Identities=25% Similarity=0.392 Sum_probs=37.7
Q ss_pred hHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.+++..++|++|......+..||||.|.||+|++.+.
T Consensus 420 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 463 (479)
T 2imp_A 420 LNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGK 463 (479)
T ss_dssp HHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHH
T ss_pred HHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchH
Confidence 56788999999999999997654467899999999999987664
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=88.08 E-value=0.2 Score=55.85 Aligned_cols=45 Identities=31% Similarity=0.427 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhceeEEEEec-cCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINT-YNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~-~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...++++.+++..++|++|. +....+..||||.|.||+|++.+.
T Consensus 413 d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~ 458 (475)
T 1euh_A 413 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVK 458 (475)
T ss_dssp CHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHH
T ss_pred CHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccH
Confidence 356788999999999999998 665567899999999999987664
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=87.95 E-value=0.21 Score=55.73 Aligned_cols=45 Identities=36% Similarity=0.607 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+++..++|++|. ....+..||||.|.||+|++.+.+
T Consensus 418 d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~ 462 (478)
T 3ty7_A 418 DKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDY 462 (478)
T ss_dssp CHHHHHHHHHHSCSSEEEETT-CC----------------------
T ss_pred CHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHH
Confidence 356788999999999999998 445567899999999999887653
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=87.69 E-value=0.72 Score=51.49 Aligned_cols=44 Identities=36% Similarity=0.648 Sum_probs=36.5
Q ss_pred hHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
...+.++.++++.+++++|.+.. .....||||.|.||+|++.+.
T Consensus 404 ~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~ 448 (486)
T 3pqa_A 404 INKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVK 448 (486)
T ss_dssp HHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHH
T ss_pred HHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcH
Confidence 46678999999999999998653 334799999999999988764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=87.12 E-value=0.21 Score=55.38 Aligned_cols=45 Identities=29% Similarity=0.442 Sum_probs=37.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.... ..+..||||.|.||+|++.+.
T Consensus 395 d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 441 (457)
T 3lns_A 395 DMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGH 441 (457)
T ss_dssp CHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHH
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchH
Confidence 456788999999999999998642 467799999999999988664
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=87.02 E-value=0.27 Score=55.23 Aligned_cols=45 Identities=44% Similarity=0.832 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...++++.++++.++|++|.+.......||||.|.||+|++.+.
T Consensus 436 d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~ 480 (501)
T 1bxs_A 436 DIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGE 480 (501)
T ss_dssp BHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchH
Confidence 356788999999999999997655557899999999999987654
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=86.32 E-value=1.4 Score=49.70 Aligned_cols=45 Identities=31% Similarity=0.420 Sum_probs=36.2
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCC--CCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFG--KDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g--~~~~~ 707 (709)
-...+.++.+++..++|++|.+.. .....||||.|.||+| ++.+.
T Consensus 442 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~ 489 (521)
T 4e4g_A 442 DGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGT 489 (521)
T ss_dssp BHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHH
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchH
Confidence 345678999999999999998654 3467999999999999 55543
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=85.71 E-value=1.4 Score=49.21 Aligned_cols=46 Identities=24% Similarity=0.477 Sum_probs=36.3
Q ss_pred ChHHHHHHH--HHhceeEEEEeccCC-CCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFV--DKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ft--r~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++. +.+..++|++|.... .....||||.|.||+|+..+.+
T Consensus 436 d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~ 484 (500)
T 2j6l_A 436 DLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSD 484 (500)
T ss_dssp CHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTT
T ss_pred CHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHH
Confidence 346778888 667889999997543 4567899999999999877653
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=85.40 E-value=0.26 Score=55.17 Aligned_cols=44 Identities=39% Similarity=0.684 Sum_probs=37.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|... ..+..||||.|.||+|++.+.
T Consensus 423 d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~ 466 (495)
T 3b4w_A 423 DVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGP 466 (495)
T ss_dssp CHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchH
Confidence 35678899999999999999765 667899999999999987654
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=85.34 E-value=1.9 Score=47.98 Aligned_cols=45 Identities=33% Similarity=0.443 Sum_probs=36.3
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC-CCCCCCCCCCccCCCC--CCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFG--KDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~-~~~~~Pf~g~k~Sg~g--~~~~~ 707 (709)
-...+.++.+.++.++|++|.+.. .....||||.|.||+| ++.+.
T Consensus 417 d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~ 464 (486)
T 1t90_A 417 NSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGK 464 (486)
T ss_dssp BHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHH
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchH
Confidence 346678999999999999997543 3467999999999999 66653
|
| >2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=84.23 E-value=1.5 Score=38.35 Aligned_cols=65 Identities=12% Similarity=0.240 Sum_probs=45.4
Q ss_pred hHHHHHHHhhhccc---CcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccc-cccchhhhhHHhH
Q psy15158 156 IPVLKTIWAGILNS---EVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDV-LMSSVFRDFYIKV 220 (709)
Q Consensus 156 ~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v-~~~~~f~~f~~~~ 220 (709)
.+.++.|=..-|.- +|..++.|+. -|++|+|+|.||-++++.+++++..++. +.+.|.+|++.-.
T Consensus 16 ~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~~e~~~~~TV~d~vdyI 85 (102)
T 2l9f_A 16 LELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAMPTNFATATVREMAEAL 85 (102)
T ss_dssp HHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSSCSCCTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCccHHHHHHccHHHHHHHH
Confidence 34456555555543 7788899875 7999999999999999999987644422 4446666654443
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=83.38 E-value=0.34 Score=54.03 Aligned_cols=45 Identities=33% Similarity=0.482 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.++++.++|++|.+. ...+..||||.|.||+|+.++.
T Consensus 417 d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~ 462 (485)
T 4dng_A 417 DLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNP 462 (485)
T ss_dssp CHHHHHHHHTTSCSSEEEESCC----------------------CH
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchH
Confidence 44678899999999999999865 3467899999999999988764
|
| >2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=83.28 E-value=0.95 Score=46.75 Aligned_cols=63 Identities=11% Similarity=0.189 Sum_probs=54.4
Q ss_pred HHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 157 PVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 157 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+|..|+.+| - +|.++.+||.-|-+|+.+++|+++.+.. ++++.=.+++.+++..++.+.+.
T Consensus 218 dwlr~~va~~L-~~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 218 AALREVILPLL-DESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHGGGC-CCSSCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCHhhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 44788999998 4 7899999999999999999999998887 88888888888888888766654
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=81.48 E-value=0.43 Score=53.61 Aligned_cols=45 Identities=40% Similarity=0.604 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+. ...+..||||.|.||+|+..+.
T Consensus 424 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~ 469 (508)
T 3r64_A 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGD 469 (508)
T ss_dssp CHHHHHHHHTTSCSSEEEECC--------------------CCCHH
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccH
Confidence 45678899999999999999865 3467799999999999987654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 709 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-138 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-135 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-117 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-109 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-87 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 8e-76 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 6e-73 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-62 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 6e-44 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-41 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-20 | |
| d2bw0a1 | 104 | b.46.1.1 (A:204-307) 10-formyltetrahydrofolate deh | 3e-05 | |
| d1dv5a_ | 80 | a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactob | 5e-05 | |
| d2pnga1 | 76 | a.28.1.1 (A:1-76) Type I fatty acid synthase ACP d | 2e-04 | |
| d2jq4a1 | 83 | a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Ag | 5e-04 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 413 bits (1063), Expect = e-138
Identities = 194/462 (41%), Positives = 272/462 (58%), Gaps = 54/462 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
++FIN E+ +SV G NPA E +C V+ + +DVD A AA +AF+ W +
Sbjct: 14 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 73
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L+ KLADL+E+++ LAT+E+++ G +++ A +G I T +Y AGW DKI
Sbjct: 74 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 133
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP+ + FT+T+ EP+GVCG I PWN+PL+M WK+ P L+ GNTVV+KP+E
Sbjct: 134 QGRTIPM----DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 189
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL + L AGFP GV+NI+PG G G AIS H+ + KV FTGST G I +
Sbjct: 190 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 249
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +SNLK+VSLELGGKSP ++F D +LD AV + GVF+++G+ CI+A R+FV+ +IY
Sbjct: 250 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 309
Query: 549 DAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ + V K +K++D E K EGA+L GG
Sbjct: 310 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 369
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G +D VIKRAN+T YGL++GIFT+D
Sbjct: 370 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 429
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
I+KA+ + SGTV++N Y+ PFGGFK SG G++L
Sbjct: 430 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGREL 471
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 405 bits (1042), Expect = e-135
Identities = 181/464 (39%), Positives = 258/464 (55%), Gaps = 54/464 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWS 306
F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+ W
Sbjct: 12 FCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWR 71
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y+AGW D
Sbjct: 72 RMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWAD 131
Query: 367 KILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426
K G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN VVMK
Sbjct: 132 KYHGKTIPI----DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKV 187
Query: 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
+E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST G I
Sbjct: 188 AEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 247
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ + R FV +
Sbjct: 248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 307
Query: 547 IYDAFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKR 591
IYD F+E+ V K + K++ Y K EGA+LL GG
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 592 LDRPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618
G ++ V+ RAN++ YGLA+ +FT
Sbjct: 368 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 427
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 KDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 471
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 358 bits (919), Expect = e-117
Identities = 154/463 (33%), Positives = 241/463 (52%), Gaps = 63/463 (13%)
Query: 254 FINGEFVNSVGGSSMEC-INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+ G + S G++ E PA +C + +++VD A +A+ A+ +WS+++ +
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-KWSKMAGIE 81
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R +M + A ++ + ++ +A +E +++G T ID + + +
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTIT-----EAEYDIDAAWQCIEYYAGLAPTL 136
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
P F +T+REP+GVC I WNYP M+ +WK AP LA GN VV KPS ++P+
Sbjct: 137 SGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
T + LAE+ AG P G++N++ G GA TG + H + KV FTGS TG K+M+ +A+
Sbjct: 197 TGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+K V+LELGGKSPL+IF D L+ AVR ++ F +G+ C + R+FV I FL
Sbjct: 256 -TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 314
Query: 553 EKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG- 596
E+VV K + K LDK++ + +AK EGAR+L GG+ L
Sbjct: 315 EEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDP 374
Query: 597 --------------------------------------DVDAVIKRANSTEYGLASGIFT 618
+ V++RAN+T +GLASG+FT
Sbjct: 375 KLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFT 434
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
DI++A +++GT +INTY+ + V PFGG+K SGFG++
Sbjct: 435 RDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRE 477
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 336 bits (862), Expect = e-109
Identities = 151/461 (32%), Positives = 233/461 (50%), Gaps = 56/461 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
++L INGE V+ G NPA + + A+++ VD A AA+ AF EW + +
Sbjct: 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-EWGQTTP 60
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+ R + KLAD++E+N + A +ES + G A + +D +++FAG + G
Sbjct: 61 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 120
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
S +R+P+GV I PWNYPLMM +WK+AP LAAGN VV+KPSE++
Sbjct: 121 LAAGEYLEGHTS---MIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 177
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLTALKLAEL + FP GV+NIL G G G+ ++ H K+R V TGS TG I+
Sbjct: 178 PLTALKLAEL-AKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH- 235
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
S++K+ +ELGGK+P+++FDD +++ V ++N G++C +A RI+ IYD
Sbjct: 236 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295
Query: 551 FLEKVVTEVKKMNHKAHLDK---------------LIDYCEKAKSEGARLLIGGKRLDRP 595
+EK+ V + A D+ + E+AK+ G +I G +
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355
Query: 596 G----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
+ + V+ AN ++YGLAS ++T D+
Sbjct: 356 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 415
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+A ++ G ++NT+ P GG K SG+GKD+
Sbjct: 416 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 456
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 280 bits (717), Expect = 2e-87
Identities = 121/457 (26%), Positives = 204/457 (44%), Gaps = 52/457 (11%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ ++NGE+ S + ++ PA+ + + SV ++++VD +A+KA W LS
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-AWRALSYI 61
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID-TWKYFAGWCDKILG 370
+R + K+AD++ ++KE++ I S + Y A+ V + + G +
Sbjct: 62 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEV 121
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
A +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 122 LEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 181
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
++ L LAE AG P GV N + G G+ G+ I +H + + FTGST G +I K A
Sbjct: 182 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 241
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
++ + LELGGK ++ +D +L+ + + G F G+ C + R+ V ++ D
Sbjct: 242 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 298
Query: 551 FLEKVVTEVKK--------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKR----- 591
+EK+ +V + D + A +GA L KR
Sbjct: 299 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLI 358
Query: 592 -------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMY 626
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 359 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418
Query: 627 FVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDL 662
++++ GTV IN + PF G K+SG G
Sbjct: 419 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQG 455
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 251 bits (641), Expect = 8e-76
Identities = 122/463 (26%), Positives = 205/463 (44%), Gaps = 62/463 (13%)
Query: 252 QLFINGEFVNSVGGSSMECINP-ANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
L+I GE+V++ M +NP A + + A + + A AA KAF+ W
Sbjct: 39 PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK-TWKDWPQ 95
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
DR L+ K A LM + K EL + G + A V +ID +Y+A +
Sbjct: 96 EDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRY 154
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
+ + N +F P+G +I PWN+P+ + + + +A GNTV+ KP+E +
Sbjct: 155 PAVEVVPYPGEDNESF--YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDA 212
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
+ K+ E+ AGFP GV+N LPG G G + +H +IR + FTGS G+KI ++A
Sbjct: 213 VVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272
Query: 491 A-----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
++ K+ +E GGK+ +++ + + D A + + +G+ C +A R+ +
Sbjct: 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ 332
Query: 546 NIYDAFLEKVVTEVKKMN--------------HKAHLDKLIDYCEKAKSEGARLLIGGKR 591
Y+ LE+V+ ++++ K++ Y E K+EG L++GGKR
Sbjct: 333 GAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKR 391
Query: 592 LDRPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618
L+ G D ++ AN T YGL G+++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDV--AAPFGGFKQSGFG 659
+ + G ++ N + PFGGFK SG
Sbjct: 452 RKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTN 494
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 242 bits (619), Expect = 6e-73
Identities = 106/461 (22%), Positives = 187/461 (40%), Gaps = 56/461 (12%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
++ GE+ S G +E +P + +TI V + ++V+ K +
Sbjct: 18 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGT 75
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ K AD++E+N + A + +++G + A+
Sbjct: 76 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDY 135
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
+REP+GV ITP+NYPL K+ GN VV+KPS P
Sbjct: 136 IPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDP 195
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
L A + + AGFP I +L G + ++ ++ V FTGST G +++K
Sbjct: 196 LPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKVGG 254
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+K+ +ELGG P ++ +D +LD A G++ G+ C + + + +Y
Sbjct: 255 ---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL 311
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--- 593
+E+V + + + +D+++ E A +G R+L GG+RL
Sbjct: 312 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY 371
Query: 594 -------------------------------RPGDVDAVIKRANSTEYGLASGIFTSDIN 622
D+D I+ AN YGL + +F D+
Sbjct: 372 VQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 431
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDL 662
K V ++ G ++IN + + PFGG K+SG ++
Sbjct: 432 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 472
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 211 bits (538), Expect = 7e-62
Identities = 92/416 (22%), Positives = 152/416 (36%), Gaps = 48/416 (11%)
Query: 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349
+ A +AF S + R + L ++ +N + ++ + D G +
Sbjct: 2 ISDTVKRAREAFN-SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYE 60
Query: 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409
V ++ + + + EP+GV +I WNYP +
Sbjct: 61 EVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTI 120
Query: 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHL 469
M +AAGN V++KPSEVS A LA L + + + G
Sbjct: 121 QPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPET---TELLKE 177
Query: 470 KIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529
+ + +TGST G +M +AA+ +L V+LELGGKSP + D +LD A R G F
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236
Query: 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVK--------------KMNHKAHLDKLIDYC 575
N G+ C++ I D +I + +EK+ +K ++ + H ++
Sbjct: 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 576 EKAKSEGARLLIGGKRLDRP---------------------------GDVDAVIKRANST 608
+ K R P ++ I+ N
Sbjct: 297 DNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQR 356
Query: 609 EYGLASGIFTSDINKAMYFVDKIDSGTVFIN--TYNKTDVAAPFGGFKQSGFGKDL 662
E LA +F+++ + + SG V N + T PFGG SG G
Sbjct: 357 EKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYH 412
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 161 bits (407), Expect = 6e-44
Identities = 49/386 (12%), Positives = 125/386 (32%), Gaps = 16/386 (4%)
Query: 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347
D++ A +A++ + R++ + K+A+ +++ ++E+ +D +
Sbjct: 1 DELLEKAKKVREAWD-VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV 59
Query: 348 KTHV-------GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITP 400
K + ID + + + + R + + +
Sbjct: 60 KESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGII 119
Query: 401 WNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGA 459
+ + L +GNT++++ + + + A + + +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 460 VTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKA 519
+ + +++R+ G ++ ++ V G + + + +L KA
Sbjct: 180 TDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKA 239
Query: 520 VRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDY----- 574
V + + G + + + I FL +V E++K + +
Sbjct: 240 VPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVPDV 298
Query: 575 -CEKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDS 633
L + +VD I+ G + I T + + A FV +ID+
Sbjct: 299 VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDA 358
Query: 634 GTVFINTYNKTDVAAPFGGFKQSGFG 659
V++N + FG + G
Sbjct: 359 AAVYVNASTRFTDGGQFGFGAEIGIS 384
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 155 bits (391), Expect = 4e-41
Identities = 67/461 (14%), Positives = 135/461 (29%), Gaps = 69/461 (14%)
Query: 265 GSSMECINPANESTI-CSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADL 323
+ N + + + +V+ AA AA K ++ RL+ R L+ +A
Sbjct: 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR-DFRRLNNSKRASLLRTIASE 60
Query: 324 MEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPN-- 381
+E +++ L++ + + + + FA + + P
Sbjct: 61 LEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRA 119
Query: 382 ---SNFTFTKREPIGVCGLITPWNYPL--MMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436
++ +G + N+PL A LAAG V++K P T+
Sbjct: 120 PLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQI 179
Query: 437 LAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
+AE +A P+ + +L G G+A+ H +I+ VGFTGS G + A E
Sbjct: 180 VAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 239
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG---GVFFNKGENCISAGRIFVDSNIYD 549
G + ++ + G+ C G +F +
Sbjct: 240 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPET 299
Query: 550 AFLEKVVTEVKKMNH----------------------KAHLDKLIDYCEKAKSEGARLLI 587
+ + + +D E A +
Sbjct: 300 QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVT 359
Query: 588 GGKRLD-----------------RPGDVDAVIKRANSTEYGLASGIFTS--DINKAMYFV 628
+ +V ++ + L + I + D + +
Sbjct: 360 SSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLI 419
Query: 629 DKI--DSGTVFINTYNKTDVA--------APFGGFKQSGFG 659
++ +G + N + T V P+ S
Sbjct: 420 PRLEEIAGRLVFNGWP-TGVEVGYAMVHGGPYPASTHSAST 459
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 93.4 bits (231), Expect = 1e-20
Identities = 61/390 (15%), Positives = 118/390 (30%), Gaps = 56/390 (14%)
Query: 294 ALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHV-- 351
A A KA +S R +++K+ D ++ N + +D L +
Sbjct: 9 AKNARKAGN-ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLK 67
Query: 352 -----------GM--SIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLI 398
M I K+ + + + P+GV +I
Sbjct: 68 RLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMAREL-----DDGLTLYQVTAPVGVLLVI 122
Query: 399 TPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA--------GFPKGV 450
++ A + +GN ++K + S T ++A++ G P G
Sbjct: 123 FESRPEVIA--NITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGS 180
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+ ++ V+ + + Q I V GS KI + V G + +
Sbjct: 181 VQLIETRQDVS-DLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYL 235
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS-------NIYDAFLEKVVTEVKKMN 563
+D +L KA R+S+ + V K
Sbjct: 236 DEDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDL 295
Query: 564 HKAHLDKLIDYCEKAKSEGARLLIGGKRLD-------------RPGDVDAVIKRANSTEY 610
A+ DKL + + ++ + + + D ++ I+ N+
Sbjct: 296 KTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSS 355
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINT 640
I T + A F+ +DS V+ N
Sbjct: 356 RHTDAIVTENKANAEKFMKGVDSSGVYWNA 385
|
| >d2bw0a1 b.46.1.1 (A:204-307) 10-formyltetrahydrofolate dehydrogenase domain 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 104 | Back information, alignment and structure |
|---|
class: All beta proteins fold: FMT C-terminal domain-like superfamily: FMT C-terminal domain-like family: Post formyltransferase domain domain: 10-formyltetrahydrofolate dehydrogenase domain 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (97), Expect = 3e-05
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVT-VEGSDTPA 71
I ++ E IHN+IRG D PGA T ++ F S++ + + G+ P
Sbjct: 8 INWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPG 67
Query: 72 ILHPDGLLFTGSDGQKVR 89
++ GL+ G+D + +
Sbjct: 68 VVTKAGLILFGNDDKMLL 85
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} Length = 80 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Score = 39.8 bits (93), Expect = 5e-05
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 151 SEEAIIPVLKTIWAGILN---SEVSEDTDFFQS-GAGSMDVVRLIEEIKENLQITLQNED 206
++EAI + I A + + + D + F++ SM V+L+ E++ + +
Sbjct: 1 ADEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSE 60
Query: 207 V 207
Sbjct: 61 F 61
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.3 bits (89), Expect = 2e-04
Identities = 8/64 (12%), Positives = 26/64 (40%)
Query: 149 TESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVL 208
E++ ++ + I + ++ D+ G S+ V + + ++ + L +V
Sbjct: 3 GEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVR 62
Query: 209 MSSV 212
++
Sbjct: 63 QLTL 66
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 37.3 bits (86), Expect = 5e-04
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 152 EEAIIPVLKTIWAGILN-SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDV 207
I +L ++++ D + +G S V+L+ I+E I + +
Sbjct: 2 NATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLL 58
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 709 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d2bw0a1 | 104 | 10-formyltetrahydrofolate dehydrogenase domain 2 { | 99.85 | |
| d1fmta1 | 108 | Methionyl-tRNAfmet formyltransferase, C-terminal d | 99.75 | |
| d2blna1 | 101 | Polymyxin resistance protein ArnA, domain 2 {Esche | 99.72 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 98.37 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 97.29 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 97.22 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 96.86 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 96.44 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 96.43 | |
| d1f80d_ | 74 | Acyl carrier protein {Bacillus subtilis [TaxId: 14 | 96.31 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 96.12 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 95.9 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 95.82 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 94.12 | |
| d1t8ka_ | 77 | Acyl carrier protein {Escherichia coli [TaxId: 562 | 93.91 | |
| d1zgha1 | 62 | Methionyl-tRNAfmet formyltransferase, C-terminal d | 93.63 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 93.05 | |
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 92.26 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 91.66 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 91.51 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 87.43 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 86.44 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 86.14 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 83.19 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2.8e-87 Score=756.71 Aligned_cols=426 Identities=47% Similarity=0.831 Sum_probs=400.9
Q ss_pred cceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch--hcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~--~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||+ ..|+++|.++|+++|++++++|++|++
T Consensus 15 ~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~e 94 (494)
T d1bxsa_ 15 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRL 94 (494)
T ss_dssp SEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHH
Confidence 689999999988889999999999999999999999999999999999996 269999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++...++..+++.++|++.+.+++.++..|.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 95 ela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 170 (494)
T d1bxsa_ 95 LLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD----GNFFTYTRSEPVGVCGQIIPWNFPLLMFL 170 (494)
T ss_dssp HHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCS----SSEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCC----CCceeEEEEccEEEEEEEeCccchhHHHH
Confidence 99999999999999987656899999999999999988887766543 33567889999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++.++++++.+||+|+|++|+|+|+++++++.|+.||+|++|.||||+.+|+.|++.
T Consensus 171 ~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~ 250 (494)
T d1bxsa_ 171 WKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEA 250 (494)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
++.+++||+++|||||||+||++|||++.|++.++.++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 251 aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~ 330 (494)
T d1bxsa_ 251 AGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLT 330 (494)
T ss_dssp HHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTS
T ss_pred hcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCC
Confidence 8876899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDAV 601 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dldea 601 (709)
++.++++++.+++++++++|+++++||.....+| |+|||
T Consensus 331 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~ea 410 (494)
T d1bxsa_ 331 PGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDV 410 (494)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHH
Confidence 6889999999999999999999999986543222 99999
Q ss_pred HHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEE
Q psy15158 602 IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681 (709)
Q Consensus 602 I~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~i 681 (709)
|+++|+++|||+++|||+|.++++++++++++|+|+||++...++.+||||+|.||+|+++|.++++.|++ .|++++
T Consensus 411 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~---~k~i~~ 487 (494)
T d1bxsa_ 411 IKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE---VKTVTI 487 (494)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE---EEEEEE
T ss_pred HHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcc---eEEEEE
Confidence 99999999999999999999999999999999999999988777889999999999999999998888877 799999
Q ss_pred ecc
Q psy15158 682 NTY 684 (709)
Q Consensus 682 N~~ 684 (709)
+..
T Consensus 488 ~~~ 490 (494)
T d1bxsa_ 488 KIS 490 (494)
T ss_dssp ECS
T ss_pred ecC
Confidence 874
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.2e-86 Score=745.64 Aligned_cols=426 Identities=43% Similarity=0.781 Sum_probs=400.2
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhch--hcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~--~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+ ..|+++++++|+++|++++++|++|+
T Consensus 14 ~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~ 93 (494)
T d1o04a_ 14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 93 (494)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhH
Confidence 4789999999988889999999999999999999999999999999999985 26999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
++|++++++|+|||+.++...|+..+++.++||+.++.++.++..+.. .+...++.++|+|||++|+|||||+.+.
T Consensus 94 eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 169 (494)
T d1o04a_ 94 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQ 169 (494)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCS----SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccC----CCceeEEEEecccEEEEECCcccHHHHH
Confidence 999999999999999988666999999999999999988887766543 3356788999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+++++++.|+.||+|+.|.||||+++|+.|++
T Consensus 170 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~ 249 (494)
T d1o04a_ 170 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQV 249 (494)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.++.+++||+++|||||||+||++|||++.|++.++.++|.++||.|++++|+|||++++|+|++.|+++++.+
T Consensus 250 ~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~ 329 (494)
T d1o04a_ 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 329 (494)
T ss_dssp HHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcc
Confidence 88766899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ---------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------CHHH
Q psy15158 563 ---------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG---------------------------------DVDA 600 (709)
Q Consensus 563 ---------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g---------------------------------dlde 600 (709)
+++.+++++.+++++++++|+++++||......| |+||
T Consensus 330 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~e 409 (494)
T d1o04a_ 330 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 409 (494)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHH
Confidence 6889999999999999999999999987543222 9999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.++++++++++++|+|+||++......+||||+|.||+|+++|.++++.|++ .|+|+
T Consensus 410 ai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~---~k~v~ 486 (494)
T d1o04a_ 410 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE---VKTVT 486 (494)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE---EEEEE
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcC---eEEEE
Confidence 999999999999999999999999999999999999999988777889999999999999999998888877 78998
Q ss_pred Eec
Q psy15158 681 INT 683 (709)
Q Consensus 681 iN~ 683 (709)
++.
T Consensus 487 ~~~ 489 (494)
T d1o04a_ 487 VKV 489 (494)
T ss_dssp EEC
T ss_pred EeC
Confidence 875
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.3e-84 Score=735.92 Aligned_cols=428 Identities=38% Similarity=0.717 Sum_probs=398.4
Q ss_pred cceecCeEeeCCCCCee-eeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 252 QLFINGEFVNSVGGSSM-ECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 252 ~~~I~G~~v~s~~~~~~-~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
..||||+|+++.+++++ +|+||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|+++|++++++|++|+++
T Consensus 21 ~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~-~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 21 LNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-KWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46999999998777665 6899999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSW 410 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~ 410 (709)
|++++++|+|||+.++.. |+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 100 la~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~ 174 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLP----GGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECG----GGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccC----CCcccccccccceeeecccCCCChHHHHHH
Confidence 999999999999999985 999999999999999988776544332 335678999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHH
Q psy15158 411 KMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490 (709)
Q Consensus 411 ~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~a 490 (709)
+++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 175 ~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~a 253 (503)
T d1a4sa_ 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 468999999999999999999999999999998
Q ss_pred HhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------
Q psy15158 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------- 562 (709)
Q Consensus 491 a~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l-------- 562 (709)
++ ++||+++|+|||||+||++|||++.|++.++.++|.++||.|++++|+|||++++++|+++|.+.++++
T Consensus 254 a~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~ 332 (503)
T d1a4sa_ 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecccccc
Confidence 85 899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC------CCC---------------------------------
Q psy15158 563 -------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD------RPG--------------------------------- 596 (709)
Q Consensus 563 -------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~------~~g--------------------------------- 596 (709)
+++.+++++.+++++++.+|+++++||.... ..|
T Consensus 333 ~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 412 (503)
T d1a4sa_ 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcC
Confidence 6889999999999999999999999986421 011
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhce
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ 676 (709)
|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++.+++.+||||+|.||+|+++|.++++.|++ .
T Consensus 413 ~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~---~ 489 (503)
T d1a4sa_ 413 TEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQ---L 489 (503)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEE---E
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhC---e
Confidence 9999999999999999999999999999999999999999999998888889999999999999999999998888 7
Q ss_pred eEEEEeccCCCCCCCCC
Q psy15158 677 GTVFINTYNKTDVAAPF 693 (709)
Q Consensus 677 ktV~iN~~~~~~~~~Pf 693 (709)
|+|+++.. +...||
T Consensus 490 k~v~~~~~---~~~~~f 503 (503)
T d1a4sa_ 490 KTVIVEMG---DVDSLF 503 (503)
T ss_dssp EEEEECCS---CCCCCC
T ss_pred EEEEEcCC---CCCCCC
Confidence 99999874 444554
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.9e-84 Score=727.58 Aligned_cols=424 Identities=36% Similarity=0.644 Sum_probs=388.0
Q ss_pred CccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHH
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKE 329 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~ 329 (709)
+.++||||+|+++ ++++++++||+||++|++++.++.+|+++|+++|++||+ .|+++|.++|+++|++++++|++|++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-~W~~~~~~~R~~iL~~~a~~l~~~~~ 79 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-EWGQTTPKVRAECLLKLADVIEENGQ 79 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhCHH
Confidence 4568999999976 568899999999999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 330 ELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 330 eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
+|++++++|+|||+.++...++..+.+.++|++...........+.. ..+...+++++|+|||++|+|||||+.+.+
T Consensus 80 ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~ 156 (474)
T d1wnda_ 80 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY---LEGHTSMIRRDPLGVVASIAPWNYPLMMAA 156 (474)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccc---cCCcceEEEEecccceEEEeecchHhhhhh
Confidence 99999999999999999776778888888888877655443322221 123567889999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
++++|||++||+||+|||+.+|+++..+++++++ ++|+|++|+|+|+++++++.|+.||+|++|.||||+++|+.|.+.
T Consensus 157 ~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~ 235 (474)
T d1wnda_ 157 WKLAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 235 (474)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHH
T ss_pred ccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHh
Confidence 9999999999999999999999999999999876 599999999999988999999999999999999999999999999
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
+++ ++||+++|||||||+||++|||++.|++.++.++|+++||.|++++|+|||++++|+|+++|++.++++
T Consensus 236 a~~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~ 314 (474)
T d1wnda_ 236 TAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 314 (474)
T ss_dssp HGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTS
T ss_pred hhc-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCC
Confidence 885 899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCE-EEECCccCCCCC---------------------------------CHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGAR-LLIGGKRLDRPG---------------------------------DVDA 600 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~-vl~GG~~~~~~g---------------------------------dlde 600 (709)
++..+.+++.+++++++.+|+. ++.|+......| |+||
T Consensus 315 ~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~de 394 (474)
T d1wnda_ 315 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 394 (474)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHH
Confidence 6889999999999999999985 556655433222 9999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~ 680 (709)
||+++|+++|||+++|||+|.+++++++.++++|+||||++......+||||+|+||+|+++|.+++++|++ .|+|+
T Consensus 395 ai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~---~k~v~ 471 (474)
T d1wnda_ 395 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTV---VRHVM 471 (474)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE---EEEEE
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCC---EEEEE
Confidence 999999999999999999999999999999999999999988777789999999999999999999998888 79998
Q ss_pred Eec
Q psy15158 681 INT 683 (709)
Q Consensus 681 iN~ 683 (709)
+++
T Consensus 472 i~~ 474 (474)
T d1wnda_ 472 VKH 474 (474)
T ss_dssp EEC
T ss_pred EeC
Confidence 863
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=7.1e-82 Score=715.96 Aligned_cols=423 Identities=28% Similarity=0.490 Sum_probs=383.3
Q ss_pred CccceecCeEeeCCCCCeeeeecCC-CCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcH
Q psy15158 250 PNQLFINGEFVNSVGGSSMECINPA-NESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNK 328 (709)
Q Consensus 250 ~~~~~I~G~~v~s~~~~~~~v~nP~-tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~ 328 (709)
++++||||+|+.+ .+.++++||. ||+++++++.++.+|+++|+++|++||+ .|+++|.++|+++|++++++|++|+
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~-~W~~~s~~~R~~iL~~~a~~l~~~~ 113 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK-TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4569999999975 3578899996 7999999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHH
Q psy15158 329 EELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 329 ~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
++|+.++++|+|||+.++.. |+..++++++||+..+.+..+...... . ..+...+.+++|+|||++|+|||||+.++
T Consensus 114 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~ 190 (516)
T d1uzba_ 114 RELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVV-P-YPGEDNESFYVPLGAGVVIAPWNFPVAIF 190 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCC-C-CTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccc-c-ccccceeEEeeccCccccccccccccccc
Confidence 99999999999999999985 999999999999999888766432221 1 12345678899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+++++|||++||+||+|||+.+|+++..+.+++.+||+|+|++|+|+|+++++++.|+.||+|+.|.||||+.+|+.|++
T Consensus 191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~ 270 (516)
T d1uzba_ 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270 (516)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHh-----cCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-
Q psy15158 489 SAAE-----SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM- 562 (709)
Q Consensus 489 ~aa~-----~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l- 562 (709)
.++. .++||+++|+|||||+||++|||++.|++.++.++|.++||.|++++|+|||++++|+|+++++++++++
T Consensus 271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~ 350 (516)
T d1uzba_ 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350 (516)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence 8763 3689999999999999999999999999999999999999999999999999999999999999998775
Q ss_pred -------------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCC---------------------------------
Q psy15158 563 -------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG--------------------------------- 596 (709)
Q Consensus 563 -------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~g--------------------------------- 596 (709)
++..+.+++.+++++++++|+.+ +||...+.+|
T Consensus 351 ~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 429 (516)
T d1uzba_ 351 VGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp BSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred cCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeC
Confidence 68899999999999999988654 5665433222
Q ss_pred CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC--CCCCCCCCCCCCCCCccCh-HHHHHHHHH
Q psy15158 597 DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD--VAAPFGGFKQSGFGKDLDI-NKAMYFVDK 673 (709)
Q Consensus 597 dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~--~~~PFGG~k~SG~G~~~G~-~~~~~ftr~ 673 (709)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+. ..+||||+|.||+|++.|+ +++++|++
T Consensus 430 d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~- 508 (516)
T d1uzba_ 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE- 508 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEE-
T ss_pred CHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCC-
Confidence 9999999999999999999999999999999999999999999986654 3689999999999998775 56677777
Q ss_pred hceeEEEEe
Q psy15158 674 IDSGTVFIN 682 (709)
Q Consensus 674 ~~~ktV~iN 682 (709)
.|+|...
T Consensus 509 --~k~v~~r 515 (516)
T d1uzba_ 509 --MKAVAER 515 (516)
T ss_dssp --EEEEEEE
T ss_pred --eeeEEEc
Confidence 6888753
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.9e-77 Score=675.54 Aligned_cols=431 Identities=27% Similarity=0.408 Sum_probs=392.4
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|++..|+++|.++|+++|++++++|++|+++
T Consensus 17 ~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 94 (499)
T d1ky8a_ 17 YPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 94 (499)
T ss_dssp ECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57999999985 4679999999999999999999999999999999888752599999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCccccccCC-CCCCCceeeeecccCEEEEECCCCchHHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHA-RPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~ 409 (709)
|++++++|+|||..++.. |+..+++.++||+..+++..+........ ...+...+++|+|+|||++|+|||||+.+.+
T Consensus 95 la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~ 173 (499)
T d1ky8a_ 95 FAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 173 (499)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhh
Confidence 999999999999999985 99999999999999988876654322211 1223456789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHH
Q psy15158 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489 (709)
Q Consensus 410 ~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~ 489 (709)
+++++||++||+||+|||+.+|+++..+++++.++|+|+++++++.+++ +.+..|+.||+|+.+.||||+.+++.+.+.
T Consensus 174 ~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~ 252 (499)
T d1ky8a_ 174 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKV 252 (499)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred hcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEEeec
Confidence 9999999999999999999999999999999999999999999999976 467889999999999999999999999987
Q ss_pred HHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh-------
Q psy15158 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------- 562 (709)
Q Consensus 490 aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------- 562 (709)
++ .+|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++
T Consensus 253 ~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~ 329 (499)
T d1ky8a_ 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRD 329 (499)
T ss_dssp HC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred cc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCC
Confidence 64 58999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCC-------------------------C---------CHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP-------------------------G---------DVDA 600 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~-------------------------g---------dlde 600 (709)
++..+.+++++++++++.+|+++++||...... | |++|
T Consensus 330 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~e 409 (499)
T d1ky8a_ 330 PTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQ 409 (499)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccccccCCCCChhhhccccCceEEEEEcCCHHH
Confidence 788999999999999999999999988643211 1 9999
Q ss_pred HHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEE
Q psy15158 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTV 679 (709)
Q Consensus 601 aI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV 679 (709)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.+..+ ..+||||+|.||+|+++|.+++++|++ .|+|
T Consensus 410 ai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~---~k~i 486 (499)
T d1ky8a_ 410 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTA---YKTI 486 (499)
T ss_dssp HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEE---EEEE
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhC---EEEE
Confidence 999999999999999999999999999999999999999987766 478999999999999999999999988 7999
Q ss_pred EEeccCCCCCCC
Q psy15158 680 FINTYNKTDVAA 691 (709)
Q Consensus 680 ~iN~~~~~~~~~ 691 (709)
++|+.....+.|
T Consensus 487 ~~~~~~~~~~~y 498 (499)
T d1ky8a_ 487 VFNYKGKGVWKY 498 (499)
T ss_dssp EEECTTSSSCSC
T ss_pred EEcCCCCCCCCC
Confidence 999866555544
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=6e-75 Score=652.32 Aligned_cols=423 Identities=29% Similarity=0.468 Sum_probs=380.1
Q ss_pred ccceecCeEeeCCCCCeeeeecCCCCCeEEEEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHH
Q psy15158 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330 (709)
Q Consensus 251 ~~~~I~G~~v~s~~~~~~~v~nP~tge~i~~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~e 330 (709)
+++||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++
T Consensus 4 ~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~-~W~~~s~~~R~~iL~~~a~~L~~~~~~ 80 (474)
T d1euha_ 4 YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-AWRALSYIERAAYLHKVADILMRDKEK 80 (474)
T ss_dssp CCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH-HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 468999999864 46899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhhCcccccc--CCCCCCCceeeeecccCEEEEECCCCchHHHH
Q psy15158 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIA--HARPNSNFTFTKREPIGVCGLITPWNYPLMML 408 (709)
Q Consensus 331 La~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~--~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~ 408 (709)
|++++++|+||+..++.. |+...++.+++++.............. .....+...+++++|+|||++|+|||||+..+
T Consensus 81 la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~ 159 (474)
T d1euha_ 81 IGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 159 (474)
T ss_dssp HHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhh
Confidence 999999999999999985 999999999999887655433211110 01122345678899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHH
Q psy15158 409 SWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488 (709)
Q Consensus 409 ~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~ 488 (709)
+++++|||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|+++++++.|+.||+|+.|.||||+.+++.+.+
T Consensus 160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~ 239 (474)
T d1euha_ 160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 239 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhh
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999998
Q ss_pred HHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh------
Q psy15158 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM------ 562 (709)
Q Consensus 489 ~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l------ 562 (709)
.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|+++++++...+
T Consensus 240 ~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (474)
T d1euha_ 240 MAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPE 316 (474)
T ss_dssp HTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGG
T ss_pred hcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcc
Confidence 764 68999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred --------hcHHHHHHHHHHHHHHHhcCCEEEECCccCC-------------------C--CC---------CHHHHHHH
Q psy15158 563 --------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-------------------R--PG---------DVDAVIKR 604 (709)
Q Consensus 563 --------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-------------------~--~g---------dldeaI~~ 604 (709)
....+.+++...+..+...+...+.++.... . -| |+||||++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~ 396 (474)
T d1euha_ 317 DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 396 (474)
T ss_dssp GTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHH
T ss_pred cccccccccchHHHHHHHHHHHhhhcccccccccCCCCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHH
Confidence 5677888999999888888776664332110 0 01 99999999
Q ss_pred HhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCC-CCCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEec
Q psy15158 605 ANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTD-VAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINT 683 (709)
Q Consensus 605 ~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~-~~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~ 683 (709)
+|+++|||+++|||+|.++++++++++++|+|+||++...+ ..+||||+|.||+|+++|++++++|++ .|+|++|.
T Consensus 397 ~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~---~k~v~~~~ 473 (474)
T d1euha_ 397 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTT---VKSVVFDI 473 (474)
T ss_dssp HHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEE---EEEEEEEC
T ss_pred HHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCc---EEEEEEec
Confidence 99999999999999999999999999999999999976554 478999999999999999999998887 79999874
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=4.1e-70 Score=617.12 Aligned_cols=401 Identities=18% Similarity=0.255 Sum_probs=339.3
Q ss_pred CCeeeeecCCCCCeEE-EEeCCChhhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChH
Q psy15158 265 GSSMECINPANESTIC-SVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVY 343 (709)
Q Consensus 265 ~~~~~v~nP~tge~i~-~v~~a~~~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~ 343 (709)
+++|+++||+|||.|+ +++.++.+|+++|+++|++||+ .|+++|+++|.++|++++++|++|+++|+.++++|+|||+
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~-~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~ 80 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR-DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 80 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 4689999999999987 7999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhhCccccccC----CC-CCCCceeeeecccCEEEEECCCCchHHHH--HHHHHHHH
Q psy15158 344 TLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAH----AR-PNSNFTFTKREPIGVCGLITPWNYPLMML--SWKMAPCL 416 (709)
Q Consensus 344 ~~a~~~ev~~aid~lr~~a~~~~~~~g~~~p~~~----~~-~~~~~~~~~~~P~GVv~~I~PwNfPl~~~--~~~iapAL 416 (709)
.++.. |+..++++++||++.+++..+....... .. ..+...+..++|+|||++|+|||||+.+. .++++|||
T Consensus 81 ~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~AL 159 (504)
T d1ez0a_ 81 VRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 159 (504)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHH
Confidence 99985 9999999999999998876543321111 01 12234577888999999999999999754 46999999
Q ss_pred HcCCEEEeeCCCCchHHHHHHHHH----HHHcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHh
Q psy15158 417 AAGNTVVMKPSEVSPLTALKLAEL----SVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492 (709)
Q Consensus 417 aaGNtVVlKPs~~tplta~~l~el----l~eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~ 492 (709)
++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|.+.+++
T Consensus 160 aaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~ 239 (504)
T d1ez0a_ 160 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 239 (504)
T ss_dssp HHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhc
Confidence 999999999999999998776555 5577999999999999989999999999999999999999999999999986
Q ss_pred cCCCc--EEEcCCCcccEEEcCCCCHHHHH--HHHHhhhhccCCCcccCCcEEEEeCccHH-HHHHHHHHHHHhh-----
Q psy15158 493 SNLKK--VSLELGGKSPLVIFDDYNLDKAV--RMSMGGVFFNKGENCISAGRIFVDSNIYD-AFLEKVVTEVKKM----- 562 (709)
Q Consensus 493 ~~~k~--v~lElGGknp~IV~~dADle~Aa--~~iv~saf~~~GQ~C~A~~rl~V~esi~d-~fl~~L~~~~~~l----- 562 (709)
+++| +++|+|||||+||++|||++.|+ ..++.++|.|+||.|++++|+||+++.++ .|++.+.+.++..
T Consensus 240 -~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (504)
T d1ez0a_ 240 -RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTL 318 (504)
T ss_dssp -SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCCBCC
T ss_pred -ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhcccccc
Confidence 6655 56699999999999999999875 47899999999999999999998887655 6777777666655
Q ss_pred ----hcHHHHHHHHHHHHHHHhcCCEEEECCccCCCC-----------------------C---------CHHHHHHHHh
Q psy15158 563 ----NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRP-----------------------G---------DVDAVIKRAN 606 (709)
Q Consensus 563 ----~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~-----------------------g---------dldeaI~~~N 606 (709)
++..+.++ .++.+..++++++.||...... | |+||||+++|
T Consensus 319 ~gp~i~~~~~~~---vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an 395 (504)
T d1ez0a_ 319 LTPGIRDSYQSQ---VVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSE 395 (504)
T ss_dssp SSHHHHHHHHHH---HHHHHTSTTEEEEECCCCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred cccchhhhhhhh---hhhhhhhhhhhcccccccccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHH
Confidence 44444444 4666777888888876532210 0 9999999999
Q ss_pred cCCCCCeEEEEccc--hHHHHHHHHhcC--eeeEEEcCCCCCCC-------CCCCCCCCCCCCCCccChHHHHHHHH
Q psy15158 607 STEYGLASGIFTSD--INKAMYFVDKID--SGTVFINTYNKTDV-------AAPFGGFKQSGFGKDLDINKAMYFVD 672 (709)
Q Consensus 607 ~t~yGLta~V~T~d--~~~a~~va~~l~--aG~V~VN~~~~~~~-------~~PFGG~k~SG~G~~~G~~~~~~ftr 672 (709)
+++|||+++|||+| ..++.+++++|+ +|+|+||+++++.. ..||||.+.||.| ..|.+++.+|++
T Consensus 396 ~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r 471 (504)
T d1ez0a_ 396 MLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLR 471 (504)
T ss_dssp TCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEE
T ss_pred CCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhc
Confidence 99999999999964 458899999986 89999999876432 2489999999955 468888877765
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.2e-69 Score=599.73 Aligned_cols=388 Identities=24% Similarity=0.318 Sum_probs=337.6
Q ss_pred HHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhhHHHHHHHHHHHHHHHHHhhh
Q psy15158 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369 (709)
Q Consensus 290 v~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~ev~~aid~lr~~a~~~~~~~ 369 (709)
|++||++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+||+..++...|+..+++.+++++..+.++.
T Consensus 2 v~~av~~Ar~Af~-~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~ 80 (446)
T d1ad3a_ 2 ISDTVKRAREAFN-SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWA 80 (446)
T ss_dssp HHHHHHHHHHHHH-TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999998 999999999999999999999999999999999999999999876699999999999998877765
Q ss_pred CccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHHHHHHHHHcCCCCC
Q psy15158 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKG 449 (709)
Q Consensus 370 g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~l~ell~eAGlP~g 449 (709)
............+...++.|+|+|||++|+|||||+.+++++++|||++||+||+|||+.+|+++..+++++.+ ++|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~~ 159 (446)
T d1ad3a_ 81 EDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQN 159 (446)
T ss_dssp SCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCTT
T ss_pred cccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-ccccc
Confidence 44221111112234568889999999999999999999999999999999999999999999999999998866 58999
Q ss_pred cEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccEEEcCCCCHHHHHHHHHhhhhc
Q psy15158 450 VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529 (709)
Q Consensus 450 vv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~IV~~dADle~Aa~~iv~saf~ 529 (709)
+++++.|.+...+ .+ .+++++.|+||||+++|+.|++.+++ +++|+++|+|||||+||++|||++.|++.++.++|.
T Consensus 160 ~~~~~~~~~~~~~-~~-~~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~ 236 (446)
T d1ad3a_ 160 LYLVVKGGVPETT-EL-LKERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236 (446)
T ss_dssp TEEECCCSHHHHH-HH-TTSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHT
T ss_pred ccccccccchhhh-hh-cccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhc
Confidence 9999998765543 34 46789999999999999999999885 889999999999999999999999999999999999
Q ss_pred cCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh--------------hcHHHHHHHHHHHHHHHhcCCEEEECCc-cCC-
Q psy15158 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM--------------NHKAHLDKLIDYCEKAKSEGARLLIGGK-RLD- 593 (709)
Q Consensus 530 ~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l--------------~~~~~~~~i~~~i~~a~~~Ga~vl~GG~-~~~- 593 (709)
++||.|+|++|+|||++++|+|+++|++.++.+ +++.+.+++..+++.++..++....++. ...
T Consensus 237 ~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~P 316 (446)
T d1ad3a_ 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSRYIAP 316 (446)
T ss_dssp TTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTSCCCSCHHHHHHHHHTTTTSCEEECCCEETTTTEECC
T ss_pred CCCCccccCCccccccchhHHHHHhhhhhhheeecccccccccccchhhhhhhhhhhccccchhcccceeecCCCCCcCC
Confidence 999999999999999999999999999988876 6788888888887665444333322221 100
Q ss_pred ------CC----------C---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCC--CC
Q psy15158 594 ------RP----------G---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKT--DV 646 (709)
Q Consensus 594 ------~~----------g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~--~~ 646 (709)
.+ | |+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.+ .+
T Consensus 317 til~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~ 396 (446)
T d1ad3a_ 317 TILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVP 396 (446)
T ss_dssp EEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCT
T ss_pred EEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCC
Confidence 00 1 999999999999999999999999999999999999999999987643 35
Q ss_pred CCCCCCCCCCCCCCccChHHHHHHHHHhceeEEEEeccC
Q psy15158 647 AAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYN 685 (709)
Q Consensus 647 ~~PFGG~k~SG~G~~~G~~~~~~ftr~~~~ktV~iN~~~ 685 (709)
.+||||+|.||+|+++|.+++.+|++ .|+|+++...
T Consensus 397 ~~PfGG~k~SG~G~~~g~~~l~~ft~---~k~v~~~~~~ 432 (446)
T d1ad3a_ 397 TLPFGGVGNSGMGAYHGKKSFETFSH---RRSCLVKSLL 432 (446)
T ss_dssp TSCCCCCGGGEECCCSTHHHHHHTEE---EEEEEECCCC
T ss_pred CCCccccccceeccchHHHHHHHHhc---eeEEEEccCC
Confidence 78999999999999999999998888 6899887543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.7e-56 Score=493.79 Aligned_cols=372 Identities=15% Similarity=0.167 Sum_probs=289.4
Q ss_pred hhHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCChHHHHHhh-----------HHHHHHH
Q psy15158 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT-----------HVGMSID 356 (709)
Q Consensus 288 ~dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l~~~e~Gk~~~~a~~~-----------ev~~aid 356 (709)
+|+++++++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||+..++... ++..+++
T Consensus 1 ee~~~a~~~A~~Af~-~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWD-VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHH
Confidence 478999999999998 9999999999999999999999999999999999999998776431 2566788
Q ss_pred HHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHH
Q psy15158 357 TWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436 (709)
Q Consensus 357 ~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~ 436 (709)
.+++++.......+...+.. .+ ......+.|.|++++++|||||+.+++++++|||++||+||+|||+.||+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~ 155 (414)
T d1o20a_ 80 ACETVIGLKDPVGEVIDSWV--RE--DGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 155 (414)
T ss_dssp HHHHHHHSCCCTTCEEEEEE--CT--TSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhhhccccccccc--cc--cccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence 88888887655555433322 11 234677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC----CCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc-cEEEc
Q psy15158 437 LAELSVRAG----FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS-PLVIF 511 (709)
Q Consensus 437 l~ell~eAG----lP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn-p~IV~ 511 (709)
+++++++++ +|.++++.+.+.+...+..+..++. +.||||+..++.+.+.+++ +.+++++|+||+| ++||+
T Consensus 156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~ 231 (414)
T d1o20a_ 156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLRE---YLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVD 231 (414)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT---TCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEEC
T ss_pred hhhHHHhhhhhccccccccccccccchhhhhhcccccc---cCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecc
Confidence 999988874 4445577777665566666655444 3444444445566666664 5677777777765 57888
Q ss_pred CCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----hcHHHHHHHHHHHHHHHhcCCEEEE
Q psy15158 512 DDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----NHKAHLDKLIDYCEKAKSEGARLLI 587 (709)
Q Consensus 512 ~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----~~~~~~~~i~~~i~~a~~~Ga~vl~ 587 (709)
+|||++.|++.++.++|.+ ||.|++++|+|||+++||+|+++|.+...+. ........+.. .+..
T Consensus 232 ~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 300 (414)
T d1o20a_ 232 ESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVP----------DVVP 300 (414)
T ss_dssp TTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHST----------TSEE
T ss_pred cccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhhhhhcc----------ccee
Confidence 9999999999999999977 9999999999999999999999999888876 11111111110 1111
Q ss_pred CCccC-CC--CC---------CHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCCCCCCCCCC
Q psy15158 588 GGKRL-DR--PG---------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQ 655 (709)
Q Consensus 588 GG~~~-~~--~g---------dldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~~PFGG~k~ 655 (709)
..... .. -| |+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.+....|||+.+.
T Consensus 301 ~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~ 380 (414)
T d1o20a_ 301 ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAE 380 (414)
T ss_dssp CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCC
T ss_pred cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCc
Confidence 11110 00 01 99999999999999999999999999999999999999999999776555566776666
Q ss_pred CCCC--Ccc--ChHHHHHHHHHhceeEEEEe
Q psy15158 656 SGFG--KDL--DINKAMYFVDKIDSGTVFIN 682 (709)
Q Consensus 656 SG~G--~~~--G~~~~~~ftr~~~~ktV~iN 682 (709)
||+| +.+ |++++++|++ .|+|...
T Consensus 381 ~G~~~~~~~~~G~~gl~~~t~---~K~vv~~ 408 (414)
T d1o20a_ 381 IGISTQRFHARGPVGLRELTT---YKFVVLG 408 (414)
T ss_dssp SCEECSSSSCCEECCTGGGEE---EEEEEEC
T ss_pred eeccCCCCCCCchhHHHHhCe---EEEEEEC
Confidence 6653 332 6777777776 6888653
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.4e-44 Score=397.96 Aligned_cols=352 Identities=18% Similarity=0.188 Sum_probs=254.4
Q ss_pred hHHHHHHHHHHhchhcccCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHhcCChHHHH----H--hhHHHHHHH
Q psy15158 289 DVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATI------ESLDSGAVYTLA----L--KTHVGMSID 356 (709)
Q Consensus 289 dv~~Av~aA~~A~~~~W~~~s~~eR~~iL~r~AdlL~~~~~eLa~l------~~~e~Gk~~~~a----~--~~ev~~aid 356 (709)
.++++++.|++|++ .|+.+|.++|.++|++++++|++|+++|++. .+.+.|.+.... + ...+...++
T Consensus 4 ~~e~~~~~Ak~A~~-~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~ 82 (436)
T d1vlua_ 4 SSQQIAKNARKAGN-ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQ 82 (436)
T ss_dssp HHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHH
Confidence 46788999999998 9999999999999999999999999999764 344555543211 0 012444455
Q ss_pred HHHHHHHHHHhhhCccccccCCCCCCCceeeeecccCEEEEECCCCchHHHHHHHHHHHHHcCCEEEeeCCCCchHHHHH
Q psy15158 357 TWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436 (709)
Q Consensus 357 ~lr~~a~~~~~~~g~~~p~~~~~~~~~~~~~~~~P~GVv~~I~PwNfPl~~~~~~iapALaaGNtVVlKPs~~tplta~~ 436 (709)
.++..+...+.. +.... .+..+++...+..+.|+||+++| ||++| ..+..+.++||++||+||+||++.++.|+..
T Consensus 83 ~l~~i~~~~dpv-g~~~~-~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~ 158 (436)
T d1vlua_ 83 GIKDVAELEDPV-GKVKM-ARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFRE 158 (436)
T ss_dssp HHHHHHHSCCSS-SCEEE-EEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhccccc-eeEee-eeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHH
Confidence 555554432211 11111 11134556677889999999988 66777 5667788999999999999999999999988
Q ss_pred HHHHHH--------HcCCCCCcEEEecCCchhHHHHHHhCCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcccE
Q psy15158 437 LAELSV--------RAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508 (709)
Q Consensus 437 l~ell~--------eAGlP~gvv~vv~g~g~~~g~~L~~~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGknp~ 508 (709)
++++++ ++|+|+++++++++. .++++.|..|++|+.|+||||....+.+.+. ..+|++.++||++|+
T Consensus 159 l~~~~~~al~~a~~~aGlP~~~i~~v~~~-~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~ 233 (436)
T d1vlua_ 159 MAKIVNDTIAQFQSETGVPVGSVQLIETR-QDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSI 233 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECCCC---CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEE
T ss_pred HHHHHHHhhhhhccccCCCCceEEEecch-hHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCccce
Confidence 877764 669999999999875 5788999999999999999999887766553 446999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhhccCCCcccCCcEEEEeCccHHHHHHHHHHHHHhh----hcHHHHHHHHHHH-HHHHhc--
Q psy15158 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----NHKAHLDKLIDYC-EKAKSE-- 581 (709)
Q Consensus 509 IV~~dADle~Aa~~iv~saf~~~GQ~C~A~~rl~V~esi~d~fl~~L~~~~~~l----~~~~~~~~i~~~i-~~a~~~-- 581 (709)
||++|||++.|++.+++++|++.|| |++.++++||+++++.|...+....+.- ..+.........+ +.+...
T Consensus 234 ~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~~~~~~~~ 312 (436)
T d1vlua_ 234 YLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEA 312 (436)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHH
T ss_pred eecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCCcEEEeCHHHHHHhhhhhhhccccccc
Confidence 9999999999999999999999996 8999999999999988866555444432 1222111111111 100000
Q ss_pred --CCEEE------ECCccCC------CCCCHHHHHHHHhcCCCCCeEEEEccchHHHHHHHHhcCeeeEEEcCCCCCCCC
Q psy15158 582 --GARLL------IGGKRLD------RPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA 647 (709)
Q Consensus 582 --Ga~vl------~GG~~~~------~~gdldeaI~~~N~t~yGLta~V~T~d~~~a~~va~~l~aG~V~VN~~~~~~~~ 647 (709)
...+. +.-+... .-.|+||||+++|+++||||++|||+|.+.+++|++++++|.||||+++.+...
T Consensus 313 ~~~~~~~~~~~~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg 392 (436)
T d1vlua_ 313 IQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADG 392 (436)
T ss_dssp HHTTBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC-
T ss_pred ccccccCCCcccchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCC
Confidence 00011 1111100 011999999999999999999999999999999999999999999998877665
Q ss_pred CCCC
Q psy15158 648 APFG 651 (709)
Q Consensus 648 ~PFG 651 (709)
.+||
T Consensus 393 ~~~g 396 (436)
T d1vlua_ 393 FRYG 396 (436)
T ss_dssp ----
T ss_pred Cccc
Confidence 6665
|
| >d2bw0a1 b.46.1.1 (A:204-307) 10-formyltetrahydrofolate dehydrogenase domain 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: FMT C-terminal domain-like superfamily: FMT C-terminal domain-like family: Post formyltransferase domain domain: 10-formyltetrahydrofolate dehydrogenase domain 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=5.9e-22 Score=175.37 Aligned_cols=100 Identities=33% Similarity=0.492 Sum_probs=90.4
Q ss_pred ccceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC-CCCCceeeccCCCCCceeeCCc-eEEEeCC
Q psy15158 7 AISITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA-NIEGTPVTVEGSDTPAILHPDG-LLFTGSD 84 (709)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 84 (709)
|.++++|||++++++|||+||||+|||||||.++|.++|++.+.+.+.. ..++++..+.+...||+++.+| +++.|+|
T Consensus 2 KKed~~IdW~~~a~~I~~~IRal~P~Pga~t~~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~v~~~~ 81 (104)
T d2bw0a1 2 KKETAKINWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDD 81 (104)
T ss_dssp CGGGGBCCCSSCHHHHHHHHHTTTTTTCCEEEETTEEEEEEEEESCCTTCCCCSEEECCTTCSSCEEEETTEEEEECTTS
T ss_pred CccccEEcCCCCHHHHHHHHhccCCCCceeEeeCCcEEEEEEEEEeccccccccceeecccCCCCEEEEeCCCEEEecCC
Confidence 6799999999999999999999999999999999999999999987655 5678999999999999888766 5667778
Q ss_pred CceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcc
Q psy15158 85 GQKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGK 138 (709)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 138 (709)
| .| .|++|| +|||+|+|.+|++
T Consensus 82 g-~l-------------------------------~i~~lq~~GKk~m~a~dflr 104 (104)
T d2bw0a1 82 K-ML-------------------------------LVKNIQLEDGKMILASNFFK 104 (104)
T ss_dssp C-EE-------------------------------EEEEEECTTSCEEEGGGTTC
T ss_pred c-eE-------------------------------EEEEEECCCCCEecHHHhhC
Confidence 8 89 999999 9999999999985
|
| >d1fmta1 b.46.1.1 (A:207-314) Methionyl-tRNAfmet formyltransferase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: FMT C-terminal domain-like superfamily: FMT C-terminal domain-like family: Post formyltransferase domain domain: Methionyl-tRNAfmet formyltransferase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=4.4e-19 Score=157.98 Aligned_cols=92 Identities=22% Similarity=0.335 Sum_probs=80.6
Q ss_pred cceeeeeCcccHHHHHHHhccCCCCcceEEEECCeEEEEEEEEecccC--CCCCceeeccCCCCCceeeCCceEEEeCCC
Q psy15158 8 ISITVIKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA--NIEGTPVTVEGSDTPAILHPDGLLFTGSDG 85 (709)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~ir~~~~~p~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (709)
.+++.|||++++++|||+||||+|||||||.++|+++||+.++..+.. ..+|+++.+. ++++++.|.||
T Consensus 3 k~d~~Idw~~~a~~I~~~IRa~~p~Pga~~~~~~~~iki~~a~~~~~~~~~~pG~v~~~~---------~~~i~v~~~dg 73 (108)
T d1fmta1 3 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEAN---------KQGIQVATGDG 73 (108)
T ss_dssp HHHHBCCTTSBHHHHHHHHHHTTTTTCEEEEETTEEEEEEEEEEECCCCCSCTTBEEEEE---------TTEEEEECSBS
T ss_pred hHHeEECCCCCHHHHHhhheeCCChhhhhhhccccceEEEEEEEeeeccccccceEEEEC---------CCcEEEEeCCc
Confidence 478899999999999999999999999999999999999999875433 2345555544 78899999999
Q ss_pred ceeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 86 QKVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
.| .|+++| +|||.|++.+|.++.
T Consensus 74 -~l-------------------------------~I~~vq~~gkk~m~~~df~~G~ 97 (108)
T d1fmta1 74 -IL-------------------------------NLLSLQPAGKKAMSAQDLLNSR 97 (108)
T ss_dssp -EE-------------------------------EEEEEEETTSCCEEHHHHHHHS
T ss_pred -eE-------------------------------EEEEEEcCCCCcccHHHHHcCC
Confidence 89 999999 999999999999874
|
| >d2blna1 b.46.1.1 (A:204-304) Polymyxin resistance protein ArnA, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: FMT C-terminal domain-like superfamily: FMT C-terminal domain-like family: Post formyltransferase domain domain: Polymyxin resistance protein ArnA, domain 2 species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=3.5e-18 Score=150.12 Aligned_cols=90 Identities=18% Similarity=0.320 Sum_probs=77.3
Q ss_pred ceeeeeCcccHHHHHHHhccC-CCCcceEEEECCeEEEEEEEEecccCCCCCceeeccCCCCCcee-eCCceEEEeCCCc
Q psy15158 9 SITVIKFNLKGEEIHNFIRGL-DSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAIL-HPDGLLFTGSDGQ 86 (709)
Q Consensus 9 ~~~~~~~~~~~~~~~~~ir~~-~~~p~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 86 (709)
||+.|||++++++|||+|||| +|||||||.++++++||+.++..+.. ....||.+ ..++++|.|+||
T Consensus 1 eD~~IdW~~~a~~I~~~IRal~~p~pga~~~~~~~~ikI~~~~~~~~~----------~~~~~G~i~~~~~l~V~~~dG- 69 (101)
T d2blna1 1 DDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHA----------SKAQPGSVISVAPLLIACGDG- 69 (101)
T ss_dssp GGGBCCTTSBHHHHHHHHHHTCTTSCCEEEEETTEEEEEEEEEEECSC----------CCSCTTBEEEETTEEEECSBS-
T ss_pred CCcEEECCCCHHHHHHhhhcCCCCCCceeeccCCceEEEEEEEeeccc----------ccccccceeecccEEEEecCC-
Confidence 688999999999999999999 58999999999999999999875432 22345533 367899999999
Q ss_pred eeecccccCchhHHHHHHHhhhhhhhhccccccccchhc-ccccccchhhhcccC
Q psy15158 87 KVRNNNQNVDGQYLILRSLVLMNVTRFLFDMKVNVKRLL-VDNKMIHACNFGKEK 140 (709)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 140 (709)
.| .|++|| +|||.|++.+|.++-
T Consensus 70 ~i-------------------------------~i~~lq~~gkk~m~a~df~ng~ 93 (101)
T d2blna1 70 AL-------------------------------EIVTGQAGDGITMQGSQLAQTL 93 (101)
T ss_dssp EE-------------------------------EEEEEEETTSCCEEHHHHHHHH
T ss_pred eE-------------------------------EEEEEECCCCcccCHHHHHccC
Confidence 89 999999 999999999999873
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=98.37 E-value=1.4e-07 Score=77.21 Aligned_cols=63 Identities=17% Similarity=0.351 Sum_probs=57.6
Q ss_pred hHHHHHHHhhhccc-CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHH
Q psy15158 156 IPVLKTIWAGILNS-EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYI 218 (709)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~ 218 (709)
...|+.||+.+|.. .|+-++|||..|+.||..+||+.++++..++++.-.++|.+++.+++.+
T Consensus 9 E~~l~~i~~~vL~~~~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~ 72 (76)
T d2gdwa1 9 ESKLAEIWERVLGVSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQ 72 (76)
T ss_dssp HHHHHHHHHHHTTSSCCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHH
Confidence 34579999999997 6999999999999999999999999999999999999999999888654
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=97.29 E-value=0.00012 Score=60.17 Aligned_cols=71 Identities=20% Similarity=0.346 Sum_probs=62.8
Q ss_pred hHhhhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 151 SEEAIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
+.+.+.+.|+.||+..|.. +|+.+++|+.-|..|+++++|+..+.+.+++++.-+.++-.++..++..-..
T Consensus 5 ~~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~ 78 (85)
T d1vkua_ 5 ERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVI 78 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHH
Confidence 4566788999999999955 8999999999999999999999999999999999999998888888765443
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.22 E-value=0.00013 Score=59.81 Aligned_cols=54 Identities=19% Similarity=0.374 Sum_probs=46.2
Q ss_pred HHHHHHHhhhcc-----cCcCCCccccccCCCcchhHHHHHHHHhhcCceecccccccc
Q psy15158 157 PVLKTIWAGILN-----SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMS 210 (709)
Q Consensus 157 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~ 210 (709)
++||.+|+.++. .+|..+++||..|..|++.++|+.++.+.+++++..+.++.+
T Consensus 3 e~i~~il~~~~~l~~~~~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~ 61 (83)
T d2jq4a1 3 ATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRK 61 (83)
T ss_dssp HHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSG
T ss_pred HHHHHHHHHHHccCCCHHHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHH
Confidence 556777776643 379999999999999999999999999999999988888744
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=96.86 E-value=0.00065 Score=55.11 Aligned_cols=57 Identities=25% Similarity=0.356 Sum_probs=50.9
Q ss_pred HhhhhHHHHHHHhhhccc---CcCCCccccccC-CCcchhHHHHHHHHhhcCceecccccc
Q psy15158 152 EEAIIPVLKTIWAGILNS---EVSEDTDFFQSG-AGSMDVVRLIEEIKENLQITLQNEDVL 208 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ne~v~ 208 (709)
++++..+++.||+.++.. +|+.+++||..| ..|++.++|+.++.+.+++++.-++++
T Consensus 2 ~e~I~~~v~~il~~~l~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~ 62 (80)
T d1dv5a_ 2 DEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFD 62 (80)
T ss_dssp CHHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCC
T ss_pred hHHHHHHHHHHHHHHhccchhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhh
Confidence 356778899999999876 688899999987 699999999999999999999999887
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.44 E-value=0.0011 Score=57.31 Aligned_cols=71 Identities=15% Similarity=0.283 Sum_probs=61.9
Q ss_pred HhhhhHHHHHHHhhhccc---CcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHhh
Q psy15158 152 EEAIIPVLKTIWAGILNS---EVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE 222 (709)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r~ 222 (709)
+..+...|+.||+.+|.- +|+.+++||. -|.+|++.++|+.++.+.+++++..+.++-.++..++..-+..
T Consensus 5 ~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~ 79 (115)
T d1klpa_ 5 QEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQK 79 (115)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHH
Confidence 445778899999999976 7899999995 9999999999999999999999999999988888887666544
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=96.43 E-value=0.0014 Score=54.99 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=58.4
Q ss_pred ccChhHhhhhHHHHHHHhhhccc---CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 147 VLTESEEAIIPVLKTIWAGILNS---EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
++|.|| +.+.||.+....+.. +|..+++|+..|.+|+++++|+.++.+.+++++..+.+|-+++.+++..-+.
T Consensus 3 ~~t~d~--l~~~lre~~~~~~~~~~~~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~ 78 (95)
T d1nq4a_ 3 LLTLSD--LLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTN 78 (95)
T ss_dssp CCCHHH--HHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHH
T ss_pred ccCHHH--HHHHHHHHHhHHhCCChhhcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHH
Confidence 456555 444567776655543 6778999999999999999999999999999999999998888888766553
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Probab=96.31 E-value=0.0014 Score=52.25 Aligned_cols=63 Identities=22% Similarity=0.375 Sum_probs=54.5
Q ss_pred hhHHHHHHHhhhccc---CcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccccccchhhhhH
Q psy15158 155 IIPVLKTIWAGILNS---EVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFY 217 (709)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~ 217 (709)
+.++++.||+..|.- +|..+++|+. .|..|++.+.|+.++.+.+++++..+.++-.++.+++.
T Consensus 4 v~~~v~~iia~~l~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~ 70 (74)
T d1f80d_ 4 TLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAV 70 (74)
T ss_dssp HHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHH
Confidence 467799999999865 7999999996 99999999999999999999999888887666666654
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.12 E-value=0.00032 Score=56.52 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=49.6
Q ss_pred HHHHHhhhccc----CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHh
Q psy15158 159 LKTIWAGILNS----EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIK 219 (709)
Q Consensus 159 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~ 219 (709)
|..+|+.+|.- +|+.+++||..|.+|+..++|+..+++.+++++.-.+++ +.++.++.+.
T Consensus 9 l~~~va~~Lgi~~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l~~~~l~-~~Ti~~L~el 72 (76)
T d2pnga1 9 LVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVR-QLTLRKLQEM 72 (76)
T ss_dssp GGGTHHHHHTCSSCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCCCHHHHT-TCCSHHHHHT
T ss_pred HHHHHHHHhccCCHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCCCHHHHH-HhhHHHHHHH
Confidence 45677777752 799999999999999999999999999999888888876 5677765544
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=95.90 E-value=0.0047 Score=50.56 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=56.2
Q ss_pred ccChhHhhhhHHHHHHHhhhcc---cCcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 147 VLTESEEAIIPVLKTIWAGILN---SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
.+|.||. .+.|+......+. .+|..+++|+..|.+|++.++|+.++.+.+++++..+.+|-+++.+++..-..
T Consensus 4 ~~t~d~l--~~~l~e~~~~~~g~~~~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~ 79 (86)
T d2af8a_ 4 LLTTDDL--RRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN 79 (86)
T ss_dssp CCCHHHH--HHHHHHTTCCCSCCCCSSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHH
T ss_pred cccHHHH--HHHHHHHHccccCCCccccccCCCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHH
Confidence 3555552 2334554443433 27778999999999999999999999999999999999998888888766554
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=1.3 Score=45.76 Aligned_cols=239 Identities=16% Similarity=0.147 Sum_probs=142.9
Q ss_pred CCceeeeecccCEEEEECCCC---chHHHHHHHHHHHHHcCC--EEEeeCCCCchHHHHHHHHHHHHcCCCCCcEEEecC
Q psy15158 382 SNFTFTKREPIGVCGLITPWN---YPLMMLSWKMAPCLAAGN--TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPG 456 (709)
Q Consensus 382 ~~~~~~~~~P~GVv~~I~PwN---fPl~~~~~~iapALaaGN--tVVlKPs~~tplta~~l~ell~eAGlP~gvv~vv~g 456 (709)
+.....++.|+--|++..|.- ||-..++ ..+||-.+|. .|+.-|+...|.+ .-..+.+|+. .+..-
T Consensus 111 Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM-~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~----~iy~~ 181 (431)
T d1k75a_ 111 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQ----DVFNV 181 (431)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCHHHHHH-HHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCC----EEEEC
T ss_pred CceeeeeeeehhhheeeccCCCccchHHHHH-HHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCcc----ceEec
Confidence 344566788999999999976 6655544 5688888997 4667787666643 2334556654 33333
Q ss_pred CchhHHHHHHh----CCCccEEEEcCChHHHHHHHHHHHhcCCCcEEEcCCCcc--cEEEcCCCCHHHHHHHHHhhhhcc
Q psy15158 457 TGAVTGEAISQ----HLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS--PLVIFDDYNLDKAVRMSMGGVFFN 530 (709)
Q Consensus 457 ~g~~~g~~L~~----~p~v~~V~FTGSt~~g~~I~~~aa~~~~k~v~lElGGkn--p~IV~~dADle~Aa~~iv~saf~~ 530 (709)
.|...-.+|.- -|.|++|.=.|+.-+...=.+-.+ ....--+=-.-|-+ .+|-|++||++.++.+++.-+=+.
T Consensus 182 GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH~ 260 (431)
T d1k75a_ 182 GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHG 260 (431)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCCccccccccCCceEEEEecCCCCHHHHHHHHHhccCCc
Confidence 35544455543 678999999998866543111111 10001111123333 344467799999999999877655
Q ss_pred CCCcccCCcEEEEeCc--cHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCHHHHHHHHhcC
Q psy15158 531 KGENCISAGRIFVDSN--IYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDVDAVIKRANST 608 (709)
Q Consensus 531 ~GQ~C~A~~rl~V~es--i~d~fl~~L~~~~~~l~~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~~gdldeaI~~~N~t 608 (709)
.. .+.++|..+ +.+++.+.+.+.++.+... +.+......+. ++.- .|++|+++++|..
T Consensus 261 ~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~r~-------~i~~~s~~~~~-ii~v-------~~~~ea~~~~N~~ 320 (431)
T d1k75a_ 261 PD-----SQVILLTPAADMARRVAEAVERQLAELPRA-------ETARQALNASR-LIVT-------KDLAQCVEISNQY 320 (431)
T ss_dssp TT-----CEEEEEESCHHHHHHHHHHHHHHHHTCSSC-------HHHHHHHTTCE-EEEC-------SSHHHHHHHHHHH
T ss_pred cc-----ceeEEEeccHHHHHHHHHHHHHHhhhchHH-------HHHHhhhccce-EEEe-------cCHHHHHHHHHhh
Confidence 44 344677665 3344444444444433111 12233344443 3321 2789999999973
Q ss_pred CCCCeEEEEccchHHHHHHHHhc-CeeeEEEcCCCC---------CCCCCCCCCCC
Q psy15158 609 EYGLASGIFTSDINKAMYFVDKI-DSGTVFINTYNK---------TDVAAPFGGFK 654 (709)
Q Consensus 609 ~yGLta~V~T~d~~~a~~va~~l-~aG~V~VN~~~~---------~~~~~PFGG~k 654 (709)
-- -=..|.++|.. .+..++ ++|.|++..++. ....+|-||..
T Consensus 321 AP-EHL~l~~~~~~---~~~~~i~nAGsIflG~~sp~a~GDY~aGpnHvLPT~G~A 372 (431)
T d1k75a_ 321 GP-EHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYT 372 (431)
T ss_dssp CC-SEEEEESTTHH---HHGGGCCCCSEEEESTTCCHHHHHHTSSSCCCCCCTTGG
T ss_pred hH-HHHHHHhcCHH---HHHhhhhhcchhhcCCCCcchhhccccCCCccCCCCCce
Confidence 21 23778888874 344554 699999998653 23467887765
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=94.12 E-value=0.014 Score=47.11 Aligned_cols=63 Identities=22% Similarity=0.237 Sum_probs=49.6
Q ss_pred HHHHHhhhccc------CcCCCccccccCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHhHh
Q psy15158 159 LKTIWAGILNS------EVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVI 221 (709)
Q Consensus 159 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~~r 221 (709)
|+.++...+.. +++-++.|+..|.+|++.++|+.++.+.+++++.-+.++-+++.+++..-++
T Consensus 8 l~~il~e~~g~~~~~~~~~d~d~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~ 76 (82)
T d1or5a_ 8 LKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVN 76 (82)
T ss_dssp HHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHT
T ss_pred HHHHHHHHhCCCcccccCCCcCcCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHH
Confidence 45555554432 3444567999999999999999999999999999888888888888776554
|
| >d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Escherichia coli [TaxId: 562]
Probab=93.91 E-value=0.025 Score=44.95 Aligned_cols=64 Identities=22% Similarity=0.321 Sum_probs=50.8
Q ss_pred hHHHHHHHhhhcc---cCcCCCccccc-cCCCcchhHHHHHHHHhhcCceeccccccccchhhhhHHh
Q psy15158 156 IPVLKTIWAGILN---SEVSEDTDFFQ-SGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIK 219 (709)
Q Consensus 156 ~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ne~v~~~~~f~~f~~~ 219 (709)
.++++.|=+..|. .+|..+++|.. -|..|+|.+.|+-++.+.+++++..++..--++.+|++.-
T Consensus 4 ~~~v~~iia~~l~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~ 71 (77)
T d1t8ka_ 4 EERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDY 71 (77)
T ss_dssp HHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHH
Confidence 3445666655554 38999999986 9999999999999999999999999888766666665543
|
| >d1zgha1 b.46.1.1 (A:165-226) Methionyl-tRNAfmet formyltransferase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: FMT C-terminal domain-like superfamily: FMT C-terminal domain-like family: Post formyltransferase domain domain: Methionyl-tRNAfmet formyltransferase, C-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=93.63 E-value=0.049 Score=41.43 Aligned_cols=46 Identities=24% Similarity=0.208 Sum_probs=41.1
Q ss_pred ccceeeeeCcccHHHHHHHhccCC--CCcceEEEECCeEEEEEEEEec
Q psy15158 7 AISITVIKFNLKGEEIHNFIRGLD--SSPGASTVLNGIEVKVFASSMW 52 (709)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ir~~~--~~p~a~~~~~~~~~~~~~~~~~ 52 (709)
+.++..|..+.+-++|||+||=|| .+|-|+..+++.++.+..+++.
T Consensus 2 kp~~s~I~~~~~i~~iyD~IRMLD~~~YP~Afi~~~n~~ieFs~a~~~ 49 (62)
T d1zgha1 2 KPEQSEISPDFDLEKIYDYIRMLDGEGYPRAFIKYGKYRLEFSRASMK 49 (62)
T ss_dssp CGGGGBCCTTSCHHHHHHHHHHTCSTTCCCCEEEETTEEEEEEEEEEE
T ss_pred ChhHccCCcccCHHHHhhheeecCCCCCCHHHhccCCEEEEEeeeEEe
Confidence 567888999999999999999998 5999999999999999888873
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=93.05 E-value=0.096 Score=56.14 Aligned_cols=46 Identities=41% Similarity=0.824 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...++++.+.+..++|++|.+....+..||||.|.||+|+..+.+
T Consensus 436 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~ 481 (503)
T d1a4sa_ 436 DISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQA 481 (503)
T ss_dssp BHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTG
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHH
Confidence 3456788999999999999987666678999999999999887653
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=92.26 E-value=0.078 Score=56.68 Aligned_cols=45 Identities=44% Similarity=0.832 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+++..++|++|.+.......||||+|+||+|+.++.
T Consensus 429 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~ 473 (494)
T d1bxsa_ 429 DIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGE 473 (494)
T ss_dssp BHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHH
T ss_pred CHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHH
Confidence 356778999999999999998766667899999999999987764
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=91.66 E-value=0.22 Score=52.99 Aligned_cols=46 Identities=39% Similarity=0.833 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
-...+.++.+.+..++|++|.+.......||||+|.||+|+..+.+
T Consensus 429 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~ 474 (494)
T d1o04a_ 429 DLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEY 474 (494)
T ss_dssp BHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGG
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHH
Confidence 4567789999999999999976555577999999999999887754
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=91.51 E-value=0.035 Score=59.15 Aligned_cols=45 Identities=31% Similarity=0.507 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCCCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...++++.+++..++|++|.+....+..||||.|.||+|++.+.
T Consensus 414 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 458 (474)
T d1wnda_ 414 DVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 458 (474)
T ss_dssp BHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHH
T ss_pred CHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHH
Confidence 356788999999999999998765667899999999999988764
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=87.43 E-value=0.6 Score=49.76 Aligned_cols=44 Identities=23% Similarity=0.350 Sum_probs=35.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccCC--CCCCCCCCCCccCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYNK--TDVAAPFGGFKQSGFGKDLD 706 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~~--~~~~~Pf~g~k~Sg~g~~~~ 706 (709)
-...++++.+.+..+++++|.... .....||||.|.||+|+..|
T Consensus 453 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G 498 (516)
T d1uzba_ 453 KREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred CHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccc
Confidence 346678899999999999997542 24578999999999998754
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=86.44 E-value=0.19 Score=53.50 Aligned_cols=45 Identities=27% Similarity=0.325 Sum_probs=37.6
Q ss_pred hHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCCC
Q psy15158 664 INKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDNL 708 (709)
Q Consensus 664 ~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~~ 708 (709)
...+.++.+.+..+++++|... +..+..||||.|.||+|++.+.+
T Consensus 430 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~ 475 (499)
T d1ky8a_ 430 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGY 475 (499)
T ss_dssp HHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTT
T ss_pred HHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHH
Confidence 4667889999999999999754 45577999999999999887765
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.14 E-value=0.14 Score=53.86 Aligned_cols=45 Identities=27% Similarity=0.341 Sum_probs=37.3
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-C-CCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-K-TDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~-~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
-...+.++.+.+..++|++|... + ..+..||||.|+||+|+..+.
T Consensus 368 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~ 414 (446)
T d1ad3a_ 368 NEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGK 414 (446)
T ss_dssp CHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTH
T ss_pred CHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHH
Confidence 46778899999999999999753 3 456799999999999988764
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=83.19 E-value=0.23 Score=52.37 Aligned_cols=45 Identities=31% Similarity=0.424 Sum_probs=37.5
Q ss_pred ChHHHHHHHHHhceeEEEEeccC-CCCCCCCCCCCccCCCCCCCCC
Q psy15158 663 DINKAMYFVDKIDSGTVFINTYN-KTDVAAPFGGFKQSGFGKDLDN 707 (709)
Q Consensus 663 G~~~~~~ftr~~~~ktV~iN~~~-~~~~~~Pf~g~k~Sg~g~~~~~ 707 (709)
....++++.+.+..++|++|... ......||||.|.||+|+..+.
T Consensus 412 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~ 457 (474)
T d1euha_ 412 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVK 457 (474)
T ss_dssp CHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHH
T ss_pred CHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHH
Confidence 35778899999999999999754 4567799999999999987653
|