Psyllid ID: psy15166


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90
MQQLPAGKLPISGSDGALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHMEMI
cccccccccccccccccEEEcHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHHccc
ccccccccccccccccEEEccHHHHHHHHHHHHHccHccccccccHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHHHHHHccc
mqqlpagklpisgsdgaLYRRQQLEKQAAEYMQqlpagklpisgsdgalYRRQQlekqvplhdlnanlchnltADEIKCEKMECQHMEMI
mqqlpagklpisgsdgaLYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHMEMI
MQQLPAGKLPISGSDGALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHMEMI
********************************************************KQVPLHDLNANLCHNLTADEIKC***********
************GS*GALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHMEMI
MQQLPAGKLPISGSDGALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHMEMI
***********SGSDGALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQH*E**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQQLPAGKLPISGSDGALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHMEMI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query90 2.2.26 [Sep-21-2011]
P47226 423 Testin OS=Mus musculus GN yes N/A 0.622 0.132 0.482 2e-09
Q2QLA1 422 Testin OS=Monodelphis dom yes N/A 0.566 0.120 0.529 2e-09
Q108U9 421 Testin OS=Loxodonta afric yes N/A 0.566 0.121 0.529 6e-09
Q90YH9 422 Testin OS=Gallus gallus G yes N/A 0.566 0.120 0.509 6e-09
Q2IBH0 421 Testin OS=Eulemur macaco N/A N/A 0.566 0.121 0.509 8e-09
Q7ZXE9 422 Testin OS=Xenopus laevis N/A N/A 0.622 0.132 0.446 9e-09
Q00PK1 421 Testin OS=Atelerix albive N/A N/A 0.566 0.121 0.509 1e-08
Q07E27 421 Testin OS=Mustela putoriu N/A N/A 0.566 0.121 0.509 1e-08
Q6DIR5 422 Testin OS=Xenopus tropica yes N/A 0.622 0.132 0.446 1e-08
Q2LAP6 419 Testin OS=Rattus norvegic no N/A 0.566 0.121 0.509 1e-08
>sp|P47226|TES_MOUSE Testin OS=Mus musculus GN=Tes PE=1 SV=1 Back     alignment and function desciption
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 23  QLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIK 78
           Q +  A +YMQ LP  K P++GS+GA YR++QL KQ+P HD + + CH L+  E+K
Sbjct: 123 QNQALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPKEVK 178




Scaffold protein that may play a role in cell adhesion, cell spreading and in the reorganization of the actin cytoskeleton. Plays a role in the regulation of cell proliferation. May act as a tumor suppressor.
Mus musculus (taxid: 10090)
>sp|Q2QLA1|TES_MONDO Testin OS=Monodelphis domestica GN=TES PE=3 SV=1 Back     alignment and function description
>sp|Q108U9|TES_LOXAF Testin OS=Loxodonta africana GN=TES PE=3 SV=1 Back     alignment and function description
>sp|Q90YH9|TES_CHICK Testin OS=Gallus gallus GN=TES PE=2 SV=1 Back     alignment and function description
>sp|Q2IBH0|TES_EULMM Testin OS=Eulemur macaco macaco GN=TES PE=3 SV=1 Back     alignment and function description
>sp|Q7ZXE9|TES_XENLA Testin OS=Xenopus laevis GN=tes PE=2 SV=1 Back     alignment and function description
>sp|Q00PK1|TES_ATEAB Testin OS=Atelerix albiventris GN=TES PE=3 SV=1 Back     alignment and function description
>sp|Q07E27|TES_MUSPF Testin OS=Mustela putorius furo GN=TES PE=3 SV=1 Back     alignment and function description
>sp|Q6DIR5|TES_XENTR Testin OS=Xenopus tropicalis GN=tes PE=2 SV=1 Back     alignment and function description
>sp|Q2LAP6|TES_RAT Testin OS=Rattus norvegicus GN=Tes PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query90
328724369 559 PREDICTED: testin-like [Acyrthosiphon pi 0.544 0.087 0.775 5e-15
242025162 642 hypothetical protein Phum_PHUM607980 [Pe 0.544 0.076 0.653 4e-11
157121242 763 testin [Aedes aegypti] gi|108874645|gb|E 0.544 0.064 0.551 1e-08
170043587 817 testin [Culex quinquefasciatus] gi|16786 0.544 0.059 0.612 2e-08
327272976 413 PREDICTED: testin-like [Anolis carolinen 0.622 0.135 0.5 6e-08
1351218 423 RecName: Full=Testin; AltName: Full=TES1 0.622 0.132 0.482 8e-08
274326961 422 testin [Monodelphis domestica] gi|901098 0.566 0.120 0.529 8e-08
475208 368 testin [Mus musculus] 0.622 0.152 0.482 1e-07
82752943 413 testis derived transcript [Didelphis vir 0.566 0.123 0.529 1e-07
74223566 411 unnamed protein product [Mus musculus] 0.566 0.124 0.529 2e-07
>gi|328724369|ref|XP_001949083.2| PREDICTED: testin-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 28  AAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADE 76
           A+EYMQ LP+ KLPISGS+GA YRR+QLEKQVPLHD NAN+CHNLT +E
Sbjct: 133 ASEYMQLLPSDKLPISGSEGAFYRRKQLEKQVPLHDFNANVCHNLTIEE 181




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242025162|ref|XP_002432995.1| hypothetical protein Phum_PHUM607980 [Pediculus humanus corporis] gi|212518504|gb|EEB20257.1| hypothetical protein Phum_PHUM607980 [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157121242|ref|XP_001653773.1| testin [Aedes aegypti] gi|108874645|gb|EAT38870.1| AAEL009271-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|170043587|ref|XP_001849464.1| testin [Culex quinquefasciatus] gi|167866870|gb|EDS30253.1| testin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|327272976|ref|XP_003221259.1| PREDICTED: testin-like [Anolis carolinensis] Back     alignment and taxonomy information
>gi|1351218|sp|P47226.1|TES_MOUSE RecName: Full=Testin; AltName: Full=TES1/TES2 gi|475210|emb|CAA55590.1| testin [Mus musculus] Back     alignment and taxonomy information
>gi|274326961|ref|NP_001162161.1| testin [Monodelphis domestica] gi|90109873|sp|Q2QLA1.1|TES_MONDO RecName: Full=Testin gi|82752833|gb|ABB89808.1| testis derived transcript [Monodelphis domestica] Back     alignment and taxonomy information
>gi|475208|emb|CAA55589.1| testin [Mus musculus] Back     alignment and taxonomy information
>gi|82752943|gb|ABB89828.1| testis derived transcript [Didelphis virginiana] Back     alignment and taxonomy information
>gi|74223566|dbj|BAE21619.1| unnamed protein product [Mus musculus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query90
UNIPROTKB|Q2QLA1 422 TES "Testin" [Monodelphis dome 0.622 0.132 0.5 1.8e-10
UNIPROTKB|E1BYP6 413 TES "Testin" [Gallus gallus (t 0.622 0.135 0.482 4.6e-10
UNIPROTKB|Q108U9 421 TES "Testin" [Loxodonta africa 0.566 0.121 0.529 4.8e-10
UNIPROTKB|Q90YH9 422 TES "Testin" [Gallus gallus (t 0.622 0.132 0.482 4.8e-10
UNIPROTKB|Q2IBH0 421 TES "Testin" [Eulemur macaco m 0.622 0.133 0.482 6.1e-10
UNIPROTKB|E2RDJ9 412 TES "Testin" [Canis lupus fami 0.622 0.135 0.482 7.5e-10
UNIPROTKB|J9JIM9 419 TES "Testin" [Sus scrofa (taxi 0.622 0.133 0.482 7.8e-10
RGD|1566346 419 Tes "testis derived transcript 0.622 0.133 0.482 7.8e-10
UNIPROTKB|Q2YDE9 421 TES "Testin" [Bos taurus (taxi 0.622 0.133 0.482 7.9e-10
UNIPROTKB|A0M8U6 421 TES "Testin" [Canis lupus fami 0.622 0.133 0.482 7.9e-10
UNIPROTKB|Q2QLA1 TES "Testin" [Monodelphis domestica (taxid:13616)] Back     alignment and assigned GO terms
 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query:    23 QLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIK 78
             Q +  A  YMQ LP  K P++GS+GA YR++QL KQ+P HD + + CH LT +E+K
Sbjct:   118 QNQALARRYMQMLPRNKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELTPNEVK 173




GO:0005737 "cytoplasm" evidence=ISS
GO:0008270 "zinc ion binding" evidence=ISS
GO:0008285 "negative regulation of cell proliferation" evidence=ISS
UNIPROTKB|E1BYP6 TES "Testin" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q108U9 TES "Testin" [Loxodonta africana (taxid:9785)] Back     alignment and assigned GO terms
UNIPROTKB|Q90YH9 TES "Testin" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q2IBH0 TES "Testin" [Eulemur macaco macaco (taxid:30603)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDJ9 TES "Testin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9JIM9 TES "Testin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1566346 Tes "testis derived transcript" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q2YDE9 TES "Testin" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|A0M8U6 TES "Testin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9UGI8TES_HUMANNo assigned EC number0.50980.56660.1211yesN/A
Q2QLG8TES_CALJANo assigned EC number0.50980.56660.1211yesN/A
Q90YH9TES_CHICKNo assigned EC number0.50980.56660.1208yesN/A
Q108U9TES_LOXAFNo assigned EC number0.52940.56660.1211yesN/A
Q2QLB2TES_HORSENo assigned EC number0.50980.56660.1211yesN/A
Q5RC52TES_PONABNo assigned EC number0.50980.56660.1211yesN/A
Q09YN8TES_RABITNo assigned EC number0.50980.56660.1211yesN/A
Q2QLF4TES_PANTRNo assigned EC number0.50980.56660.1211yesN/A
Q2YDE9TES_BOVINNo assigned EC number0.50980.56660.1211yesN/A
Q2QLE3TES_PIGNo assigned EC number0.50980.56660.1211yesN/A
Q2QLA1TES_MONDONo assigned EC number0.52940.56660.1208yesN/A
A0M8U6TES_CANFANo assigned EC number0.50980.56660.1211yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query90
cd0982988 cd09829, PET_testin, The PET domain of Testin 3e-22
pfam06297106 pfam06297, PET, PET Domain 6e-15
cd0902782 cd09027, PET, PET ((Prickle Espinas Testin) domain 5e-11
cd0983083 cd09830, PET_LIMPETin_LIM-9, The PET domain of pro 2e-10
cd0982797 cd09827, PET_Prickle, The PET domain of Prickle 5e-08
>gnl|CDD|193604 cd09829, PET_testin, The PET domain of Testin Back     alignment and domain information
 Score = 81.9 bits (203), Expect = 3e-22
 Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 2/56 (3%)

Query: 28 AAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKME 83
          A  YM+ LP  K PI+GS+GA YR++QL+KQ+PLHD + +LCH L+ +E+K  +ME
Sbjct: 15 ARYYMELLPKEKQPIAGSEGAQYRKKQLQKQLPLHDQDPSLCHELSENEVK--QME 68


The PET domain of Testin: Testin contains a PET domain at the N-terminus and three C-terminal LIM domains. Testin is a cytoskeleton associated focal adhesion protein that localizes along actin stress fibers, at cell-cell contact areas, and at focal adhesion plaques. Testin interacts with a variety of cytoskeletal proteins, including zyxin, mena, VASP, talin, and actin and is involved in cell motility and adhesion events. Knockout mice experiments reveal a tumor repressor function of Testin. The PET domain is a protein-protein interaction domain and is usually found in conjunction with LIM domain, which is also involved in protein-protein interactions. The PET containing proteins serve as adaptors or scaffolds to support the assembly of multimeric protein complexes. Length = 88

>gnl|CDD|191489 pfam06297, PET, PET Domain Back     alignment and domain information
>gnl|CDD|193601 cd09027, PET, PET ((Prickle Espinas Testin) domain is involved in protein-protein interactions Back     alignment and domain information
>gnl|CDD|193605 cd09830, PET_LIMPETin_LIM-9, The PET domain of protein LIMPETin and LIM-9 Back     alignment and domain information
>gnl|CDD|193602 cd09827, PET_Prickle, The PET domain of Prickle Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 90
PF06297106 PET: PET Domain; InterPro: IPR010442 The PET domai 99.97
PF06297106 PET: PET Domain; InterPro: IPR010442 The PET domai 94.02
>PF06297 PET: PET Domain; InterPro: IPR010442 The PET domain is a ~110 amino acid motif in the N-terminal part of LIM domain proteins Back     alignment and domain information
Probab=99.97  E-value=5.8e-31  Score=181.69  Aligned_cols=71  Identities=35%  Similarity=0.525  Sum_probs=67.9

Q ss_pred             cchhhhhcHHHHHHHHhcCCCCCCCCCCChhHHHHHHHHHHhcCCCCCChhhhcCCCHHHHHHHHHhhhhh
Q psy15166         17 ALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTADEIKCEKMECQHM   87 (90)
Q Consensus        17 ~l~~kqQl~e~v~~Ym~~LP~~kvP~~gS~Ge~~R~kQL~~QLP~hD~d~~yC~~LseeE~kel~~~~~~~   87 (90)
                      +|+++...+++|++||++||+++||++||+||+||++||++|||+||+|++||++||++|++++++|+...
T Consensus        22 ~WvPpgl~~~~v~~Ym~~LP~~~vP~~gS~Ge~~R~~QL~~QLP~hD~d~~~C~~Lse~E~k~l~~F~~~r   92 (106)
T PF06297_consen   22 AWVPPGLSPELVEQYMSCLPEEKVPVVGSPGEKYRRRQLLYQLPPHDLDPRYCHSLSEEEKKELEDFVKQR   92 (106)
T ss_pred             eecCCCCChHHHHHHHHhCCCcCCCCCCCHHHHHHHHHHHHcCCcccCCHHHHhhCCHHHHHHHHHHHHHH
Confidence            67888888999999999999999999999999999999999999999999999999999999999999754



The domain was described in Drosophila proteins involved in cell differentiation and is named after Prickle, Espinas and Testin. PET domain proteins contain about three zinc-binding LIM domains (see PDOC00382 from INTERPRO, IPR001781 from INTERPRO) and are found among metazoans. The PET domain has been suggested to play a role in protein-protein interactions with proteins involved in planar polarity signalling or organisation of the cytoskeleton []. Some proteins known to contain a PET domain: Mammalian testin protein (Q9UGI8 from SWISSPROT), which may function as a tumour suppressor. Mammalian LIM domain only protein 6 (LMO6/Prickle3, O43900 from SWISSPROT). Fruit fly prickle (A1Z6W3 from SWISSPROT) and espinas (Q9U1I1 from SWISSPROT) proteins encoded by the tissue polarity gene prickle (pk), involved in the control of orientation of bristles and hairs. Mammalian prickle-like proteins 1 (Q96MT3 from SWISSPROT) and 2 (Q7Z3G6 from SWISSPROT). ; GO: 0008270 zinc ion binding

>PF06297 PET: PET Domain; InterPro: IPR010442 The PET domain is a ~110 amino acid motif in the N-terminal part of LIM domain proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00