Psyllid ID: psy15186

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-
Protein Sequence
MTKVHGKRYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFFR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccEEEEccccEEEEccHHHHHHHHHcccccccccHHHHHHHHHHHHccccEEEcccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEcccEEEEccccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHccHHHccccEEcccccEEEcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccEEEEEEccccccEEEEEcc
Coil and Loop (DISEMBL)
mtkvhgkryaykfdfqglaaatqpaaadpaykyqsdlfmssyhhstklnfmssaagiqsstgsGQIQLWQFLLELLsdstnancitwegtngefkltdpdevarrwgerkskpnmnyDKLSRALRTHSRRLRKIFipglgnidKEIVYFFR
Flexible Loop (DISEMBL)
MTKVHGKRYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITwegtngefkltdpdevarrwgerkskpnmnydklsralrthsrrlrkifipglgnidKEIVYFFR
Low Complexity Region (SEG)
MTKVHGKRYAYKFDFQGLaaatqpaaadpaYKYQSDLFMSSYHHSTKLNFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFFR
Disordered region (IsUnstruct)
*******RYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMS****I****GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLT****************************THSRRLRKIFIPGLGNIDKEIVYFF*
Disordered Region (DISOPRED)
*TK**GKRYAYKFDFQ*****************QSDLFMSSYHHSTKLNFM************GQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFFR
Disordered Region (DISEMBL)
MTKVHGKRYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFFR
Disordered Region (DISPRO)
***VHGKRYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFFR
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKVHGKRYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	151	2.2.26 [Sep-21-2011]
P29774	490	DNA-binding protein D-ETS	yes	N/A	0.437	0.134	0.940	1e-33
Q90837	478	Transcriptional regulator	yes	N/A	0.423	0.133	0.910	6e-33
P81270	486	Transcriptional regulator	yes	N/A	0.423	0.131	0.910	6e-33
P41157	453	Retroviral integration si	N/A	N/A	0.423	0.141	0.910	2e-32
P11308	486	Transcriptional regulator	yes	N/A	0.423	0.131	0.895	3e-32
Q01414	173	Transcriptional regulator	N/A	N/A	0.397	0.346	0.968	3e-32
Q01543	452	Friend leukemia integrati	no	N/A	0.423	0.141	0.910	3e-32
P26323	452	Friend leukemia integrati	no	N/A	0.423	0.141	0.910	3e-32
Q29RS8	452	Friend leukemia integrati	no	N/A	0.423	0.141	0.910	3e-32
A3FEM2	235	Protein FEV OS=Danio reri	no	N/A	0.450	0.289	0.871	2e-30

>sp|P29774|ETS3_DROME DNA-binding protein D-ETS-3 OS=Drosophila melanogaster GN=Ets65A PE=2 SV=3

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S+GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct: 310 ASSGSGQIQLWQFLLELLSDSNNASCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 369

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 370 KLSRALR 376

Drosophila melanogaster (taxid: 7227)

>sp|Q90837|ERG_CHICK Transcriptional regulator Erg OS=Gallus gallus GN=ERG PE=2 SV=1

 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 303 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 362

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 363 KLSRALR 369

Acts as a transcriptional activator.

Gallus gallus (taxid: 9031)

>sp|P81270|ERG_MOUSE Transcriptional regulator ERG OS=Mus musculus GN=Erg PE=1 SV=2

 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 311 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 370

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 371 KLSRALR 377

Transcriptional regulator. May participate in transcriptional regulation through the recruitment of SETDB1 histone methyltransferase and subsequent modification of local chromatin structure.

Mus musculus (taxid: 10090)

>sp|P41157|FLI1_XENLA Retroviral integration site protein Fli-1 homolog OS=Xenopus laevis GN=fli1 PE=2 SV=1

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS+NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 275 ANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 334

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 335 KLSRALR 341

Xenopus laevis (taxid: 8355)

>sp|P11308|ERG_HUMAN Transcriptional regulator ERG OS=Homo sapiens GN=ERG PE=1 SV=2

 Score =  137 bits (345), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS+N++CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 311 ANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 370

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 371 KLSRALR 377

Transcriptional regulator. May participate in transcriptional regulation through the recruitment of SETDB1 histone methyltransferase and subsequent modification of local chromatin structure.

Homo sapiens (taxid: 9606)

>sp|Q01414|ERG_LYTVA Transcriptional regulator ERG homolog (Fragment) OS=Lytechinus variegatus GN=ERG PE=3 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/63 (96%), Positives = 63/63 (100%)

Query: 63  SGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSR 122
           SGQIQLWQFLLELLSDS+NANCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLSR
Sbjct: 1   SGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSR 60

Query: 123 ALR 125
           ALR
Sbjct: 61  ALR 63

Acts as a transcriptional activator.

Lytechinus variegatus (taxid: 7654)

>sp|Q01543|FLI1_HUMAN Friend leukemia integration 1 transcription factor OS=Homo sapiens GN=FLI1 PE=1 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 65/67 (97%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 274 ANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 333

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 334 KLSRALR 340

Sequence-specific transcriptional activator. Recognizes the DNA sequence 5'-C[CA]GGAAGT-3'.

Homo sapiens (taxid: 9606)

>sp|P26323|FLI1_MOUSE Friend leukemia integration 1 transcription factor OS=Mus musculus GN=Fli1 PE=1 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 65/67 (97%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 274 ANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 333

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 334 KLSRALR 340

Sequence-specific transcriptional activator. Recognizes the DNA sequence 5'-C[CA]GGAAGT-3'.

Mus musculus (taxid: 10090)

>sp|Q29RS8|FLI1_BOVIN Friend leukemia integration 1 transcription factor OS=Bos taurus GN=FLI1 PE=2 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 65/67 (97%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           ++ GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct: 274 ANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 333

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 334 KLSRALR 340

Sequence-specific transcriptional activator. Recognizes the DNA sequence 5'-C[CA]GGAAGT-3'.

Bos taurus (taxid: 9913)

>sp|A3FEM2|FEV_DANRE Protein FEV OS=Danio rerio GN=fev PE=2 SV=1

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 62/70 (88%), Gaps = 2/70 (2%)

Query: 56  GIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNM 115
           G+Q   GSGQIQLWQFLLELLSDS N  CI WEGTNGEFKL DPDEVARRWGERKSKPNM
Sbjct: 50  GVQK--GSGQIQLWQFLLELLSDSANMTCIAWEGTNGEFKLIDPDEVARRWGERKSKPNM 107

Query: 116 NYDKLSRALR 125
           NYDKLSRALR
Sbjct: 108 NYDKLSRALR 117

Functions as a transcriptional regulator. Functions in the differentiation and the maintenance of the central serotonergic neurons. May play a role in cell growth.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	151
291239654	205	PREDICTED: ETS transcription factor-like	0.463	0.341	0.890	3e-32
291239656	291	PREDICTED: ETS transcription factor-like	0.437	0.226	0.955	3e-32
242022115	399	fli1, putative [Pediculus humanus corpor	0.437	0.165	0.955	3e-32
323338937	504	EWSR1/FLI1 fusion protein type 1 [Homo s	0.403	0.121	0.953	4e-32
169655958	498	EWS/FLI fusion protein [Homo sapiens]	0.403	0.122	0.953	4e-32
323338939	526	EWSR1/FLI1 fusion protein type 2 [Homo s	0.403	0.115	0.953	4e-32
47551301	498	transcription factor Erg [Strongylocentr	0.496	0.150	0.831	4e-32
158294715	257	AGAP005755-PB [Anopheles gambiae str. PE	0.430	0.252	0.955	4e-32
12963355	476	Ewings sarcoma EWS-Fli1 (type 1) oncogen	0.403	0.128	0.937	6e-32
24659074	490	Ets at 65A, isoform A [Drosophila melano	0.437	0.134	0.940	6e-32

>gi|291239654|ref|XP_002739734.1| PREDICTED: ETS transcription factor-like [Saccoglossus kowalevskii]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 70/73 (95%)

Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
           +A+   ++TGSGQIQLWQFLLELLSDS+NANCITWEGTNGEFKLTDPDEVARRWGERKSK
Sbjct: 24  AASSRLANTGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKLTDPDEVARRWGERKSK 83

Query: 113 PNMNYDKLSRALR 125
           PNMNYDKLSRALR
Sbjct: 84  PNMNYDKLSRALR 96

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|291239656|ref|XP_002739738.1| PREDICTED: ETS transcription factor-like [Saccoglossus kowalevskii]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 67/67 (100%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S+GSGQIQLWQFLLELLSDS+NANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct: 117 ASSGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 176

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 177 KLSRALR 183

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|242022115|ref|XP_002431487.1| fli1, putative [Pediculus humanus corporis] gi|212516775|gb|EEB18749.1| fli1, putative [Pediculus humanus corporis]

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 67/67 (100%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S+GSGQIQLWQFLLELLSDS+NANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct: 242 ASSGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 301

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 302 KLSRALR 308

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|323338937|gb|ADX41459.1| EWSR1/FLI1 fusion protein type 1 [Homo sapiens]

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 63/64 (98%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLS
Sbjct: 329 GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLS 388

Query: 122 RALR 125
           RALR
Sbjct: 389 RALR 392

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|169655958|gb|ACA62796.1| EWS/FLI fusion protein [Homo sapiens]

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 63/64 (98%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLS
Sbjct: 323 GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLS 382

Query: 122 RALR 125
           RALR
Sbjct: 383 RALR 386

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|323338939|gb|ADX41460.1| EWSR1/FLI1 fusion protein type 2 [Homo sapiens]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 63/64 (98%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLS
Sbjct: 351 GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLS 410

Query: 122 RALR 125
           RALR
Sbjct: 411 RALR 414

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47551301|ref|NP_999833.1| transcription factor Erg [Strongylocentrotus purpuratus] gi|40806090|gb|AAR92036.1| transcription factor Erg [Strongylocentrotus purpuratus]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/77 (83%), Positives = 69/77 (89%)

Query: 49  NFMSSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGE 108
           N  S    ++ + GSGQIQLWQFLLELLSDS+NANCITWEGTNGEFK+TDPDEVARRWGE
Sbjct: 311 NLQSVILALRHNKGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGE 370

Query: 109 RKSKPNMNYDKLSRALR 125
           RKSKPNMNYDKLSRALR
Sbjct: 371 RKSKPNMNYDKLSRALR 387

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|158294715|ref|XP_315768.3| AGAP005755-PB [Anopheles gambiae str. PEST] gi|157015694|gb|EAA11764.4| AGAP005755-PB [Anopheles gambiae str. PEST]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S+GSGQIQLWQFLLELLSDSTNA CITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct: 78  ASSGSGQIQLWQFLLELLSDSTNATCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 137

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 138 KLSRALR 144

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|12963355|gb|AAK11227.1| Ewings sarcoma EWS-Fli1 (type 1) oncogene [Homo sapiens]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 60/64 (93%), Positives = 63/64 (98%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWG+RKSKPNMNYDKLS
Sbjct: 301 GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGQRKSKPNMNYDKLS 360

Query: 122 RALR 125
           RALR
Sbjct: 361 RALR 364

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|24659074|ref|NP_729142.1| Ets at 65A, isoform A [Drosophila melanogaster] gi|30316327|sp|P29774.3|ETS3_DROME RecName: Full=DNA-binding protein D-ETS-3 gi|23095609|gb|AAF50697.2| Ets at 65A, isoform A [Drosophila melanogaster]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S+GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct: 310 ASSGSGQIQLWQFLLELLSDSNNASCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 369

Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 370 KLSRALR 376

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	151
FB|FBgn0005658	490	Ets65A "Ets at 65A" [Drosophil	0.443	0.136	0.940	1.1e-33
UNIPROTKB|Q8UUU0	451	ERG "Erg isoform C-1-1" [Gallu	0.443	0.148	0.910	1.4e-30
UNIPROTKB|Q90837	478	ERG "Transcriptional regulator	0.443	0.140	0.910	1.4e-30
MGI|MGI:95415	486	Erg "avian erythroblastosis vi	0.443	0.137	0.910	1.4e-30
UNIPROTKB|F6QFZ1	455	ERG "Uncharacterized protein"	0.443	0.147	0.910	1.4e-30
RGD|621108	455	Erg "v-ets erythroblastosis vi	0.443	0.147	0.910	1.4e-30
UNIPROTKB|D4AA71	479	Erg "Protein Erg" [Rattus norv	0.443	0.139	0.910	1.4e-30
UNIPROTKB|F1M061	456	Erg "Protein Erg" [Rattus norv	0.443	0.146	0.910	1.4e-30
UNIPROTKB|Q6IMZ7	455	Erg "V-ets erythroblastosis vi	0.443	0.147	0.910	1.4e-30
UNIPROTKB|F1NT87	432	FLI1 "Uncharacterized protein"	0.443	0.155	0.910	2.3e-30

FB|FBgn0005658 Ets65A "Ets at 65A" [Drosophila melanogaster (taxid:7227)]

 Score = 341 (125.1 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             +S+GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct:   310 ASSGSGQIQLWQFLLELLSDSNNASCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 369

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   370 KLSRALR 376

GO:0003677 "DNA binding" evidence=ISS;NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

UNIPROTKB|Q8UUU0 ERG "Erg isoform C-1-1" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   276 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 335

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   336 KLSRALR 342

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q90837 ERG "Transcriptional regulator Erg" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   303 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 362

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   363 KLSRALR 369

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

MGI|MGI:95415 Erg "avian erythroblastosis virus E-26 (v-ets) oncogene related" [Mus musculus (taxid:10090)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   311 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 370

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   371 KLSRALR 377

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA

UNIPROTKB|F6QFZ1 ERG "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   280 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 339

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   340 KLSRALR 346

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

RGD|621108 Erg "v-ets erythroblastosis virus E26 oncogene homolog (avian)" [Rattus norvegicus (taxid:10116)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   280 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 339

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   340 KLSRALR 346

GO:0030529 "ribonucleoprotein complex" evidence=ISO

UNIPROTKB|D4AA71 Erg "Protein Erg" [Rattus norvegicus (taxid:10116)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   304 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 363

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   364 KLSRALR 370

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

UNIPROTKB|F1M061 Erg "Protein Erg" [Rattus norvegicus (taxid:10116)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   281 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 340

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   341 KLSRALR 347

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

UNIPROTKB|Q6IMZ7 Erg "V-ets erythroblastosis virus E26 oncogene like (Avian), isoform CRA_e" [Rattus norvegicus (taxid:10116)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+N+NCITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   280 ANPGSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 339

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   340 KLSRALR 346

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

UNIPROTKB|F1NT87 FLI1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 61/67 (91%), Positives = 66/67 (98%)

Query:    59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
             ++ GSGQIQLWQFLLELLSDS+NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYD
Sbjct:   254 ANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYD 313

Query:   119 KLSRALR 125
             KLSRALR
Sbjct:   314 KLSRALR 320

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000980 "RNA polymerase II distal enhancer sequence-specific DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008015 "blood circulation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P41157	FLI1_XENLA	No assigned EC number	0.9104	0.4238	0.1412	N/A	N/A
P29774	ETS3_DROME	No assigned EC number	0.9402	0.4370	0.1346	yes	N/A
Q90837	ERG_CHICK	No assigned EC number	0.9104	0.4238	0.1338	yes	N/A
P11308	ERG_HUMAN	No assigned EC number	0.8955	0.4238	0.1316	yes	N/A
P81270	ERG_MOUSE	No assigned EC number	0.9104	0.4238	0.1316	yes	N/A
Q29RS8	FLI1_BOVIN	No assigned EC number	0.9104	0.4238	0.1415	no	N/A
Q01543	FLI1_HUMAN	No assigned EC number	0.9104	0.4238	0.1415	no	N/A
P26323	FLI1_MOUSE	No assigned EC number	0.9104	0.4238	0.1415	no	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	151
pfam00178	85	pfam00178, Ets, Ets-domain	1e-35
smart00413	87	smart00413, ETS, erythroblast transformation speci	2e-34

>gnl|CDD|143944 pfam00178, Ets, Ets-domain

 Score =  117 bits (296), Expect = 1e-35
 Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 3/73 (4%)

Query: 65  QIQLWQFLLELLSDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRA 123
           QIQLWQFLLELL+D  N + I W G   GEFKL DP+EVAR WG RK+KPNMNYDKLSRA
Sbjct: 1   QIQLWQFLLELLTDQDNRDFIRWTGRDKGEFKLVDPEEVARLWGIRKNKPNMNYDKLSRA 60

Query: 124 LRTHSRR--LRKI 134
           LR + ++  +RK+
Sbjct: 61  LRYYYKKGIIRKV 73

Length = 85

>gnl|CDD|197710 smart00413, ETS, erythroblast transformation specific domain

 Score =  115 bits (289), Expect = 2e-34
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 3/73 (4%)

Query: 65  QIQLWQFLLELLSDSTNANCITWEGTN-GEFKLTDPDEVARRWGERKSKPNMNYDKLSRA 123
            IQLWQFLL+LL D  N++ I W   + GEFKL DP+EVAR WG+RK+KPNMNY+KLSRA
Sbjct: 1   GIQLWQFLLDLLLDPENSDIIKWTDRDEGEFKLVDPEEVARLWGQRKNKPNMNYEKLSRA 60

Query: 124 LRTHSRR--LRKI 134
           LR + ++  L K+
Sbjct: 61  LRYYYKKNILEKV 73

variation of the helix-turn-helix motif. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	151
smart00413	87	ETS erythroblast transformation specific domain. v	100.0
KOG3806|consensus	177		100.0
PF00178	85	Ets: Ets-domain; InterPro: IPR000418 Transcription	100.0
KOG3805|consensus	361		99.97
KOG3804|consensus	390		99.94
KOG3804|consensus	390		98.66
PF00447	103	HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR0	96.79
smart00415	105	HSF heat shock factor.	96.6
COG5169	282	HSF1 Heat shock transcription factor [Transcriptio	93.32
KOG0627|consensus	304		86.65

>smart00413 ETS erythroblast transformation specific domain

Probab=100.00  E-value=1.3e-39  Score=230.71  Aligned_cols=81  Identities=60%  Similarity=1.022  Sum_probs=75.5

Q ss_pred             cchHHHHHHHhcCCCCCCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCcc
Q psy15186         65 QIQLWQFLLELLSDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNID  143 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~  143 (151)
                      +++||+||++||.||++++||+||| .+|||+|+||++||+|||.+||+|+||||||||||||||++++...|||     
T Consensus         1 ~~~Lw~FL~~LL~d~~~~~~I~W~~k~~g~Fkl~~~~~vA~lWG~~Knk~~M~YeklSRaLRyyy~~~il~Kv~g-----   75 (87)
T smart00413        1 QIQLWQFLLDLLLDPENGDIIRWTDRDGGEFKLVDPEEVARLWGQRKNKPNMNYEKLSRALRYYYKKNILRKVPG-----   75 (87)
T ss_pred             CccHHHHHHHHHcCccCCCeEEeeCCCCCEEEecCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhcCcEEecCC-----
Confidence            3689999999999999999999999 6899999999999999999999999999999999999999976555554     


Q ss_pred             cceeeec
Q psy15186        144 KEIVYFF  150 (151)
Q Consensus       144 ~~l~y~f  150 (151)
                      ||+||+|
T Consensus        76 ~rl~Y~F   82 (87)
T smart00413       76 KRLVYKF   82 (87)
T ss_pred             ceEEEec
Confidence            8999999

variation of the helix-turn-helix motif

>KOG3806|consensus

Probab=100.00  E-value=6.9e-39  Score=251.74  Aligned_cols=88  Identities=65%  Similarity=1.024  Sum_probs=81.3

Q ss_pred             ccCCCCCcchHHHHHHHhcCCCCCCCcccccCC-CceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhcc
Q psy15186         58 QSSTGSGQIQLWQFLLELLSDSTNANCITWEGT-NGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFI  136 (151)
Q Consensus        58 ~s~~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~-~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~  136 (151)
                      .+..++|+++|||||++||+|+++++||+|||. ++||+++||++||||||++||+|+||||||||||||||++.++-.|
T Consensus        61 ~s~~~sg~iqLwqFLleLl~d~~~~~~I~Wtg~~g~EFkl~dp~eVArlWG~rK~kp~MNYdKLSRaLRyyY~kni~~Kv  140 (177)
T KOG3806|consen   61 ESTSGSGQIQLWQFLLELLQDESNAHIIAWTGKDGLEFKLVDPDEVARLWGARKNKPNMNYDKLSRALRYYYDKNILKKV  140 (177)
T ss_pred             ccCCCCchhhHHHHHHHHHhCcccCCeeEEeCCCCceEEecCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHHhcCceeec
Confidence            456789999999999999999999999999995 6699999999999999999999999999999999999999866555


Q ss_pred             CCCCCcccceeeec
Q psy15186        137 PGLGNIDKEIVYFF  150 (151)
Q Consensus       137 p~~~~i~~~l~y~f  150 (151)
                      ||     +|.||+|
T Consensus       141 ~G-----kr~~YkF  149 (177)
T KOG3806|consen  141 PG-----KRFVYKF  149 (177)
T ss_pred             CC-----ceEEEEE
Confidence            55     7999999

>PF00178 Ets: Ets-domain; InterPro: IPR000418 Transcription factors are protein molecules that bind to specific DNA sequences in the genome, resulting in the induction or inhibition of gene transcription []

Probab=100.00  E-value=3.4e-37  Score=218.00  Aligned_cols=82  Identities=55%  Similarity=0.965  Sum_probs=74.0

Q ss_pred             cchHHHHHHHhcCCCCCCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCcc
Q psy15186         65 QIQLWQFLLELLSDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNID  143 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~  143 (151)
                      +++||+||++||+|++++++|+||| ++|||+|+||++||+|||.+||+++||||||||+||+||++++...|+|     
T Consensus         1 ~~~Lw~FLl~LL~d~~~~~~I~Wt~~~~~eFki~d~~~vA~lWG~~k~~~~m~yeklsR~LR~yy~k~il~kv~g-----   75 (85)
T PF00178_consen    1 QIQLWQFLLELLEDPSNSDIIAWTGKRGGEFKIVDPEAVARLWGKHKNRPNMNYEKLSRALRYYYKKGILEKVKG-----   75 (85)
T ss_dssp             S-SHHHHHHHHHHSGGGTTTEEEEETSTTEEEESSHHHHHHHHHHHTTSTT-SHHHHHHHHHHHHHTTSEEEETT-----
T ss_pred             CccHHHHHHHHhcCccCCCeeEeeccCCCeEEecCHHHHHHHHHHHcCCccccHHHHHHHHHHHhhCCeEEecCC-----
Confidence            4789999999999999999999999 7899999999999999999999999999999999999999985544443     


Q ss_pred             cceeeecC
Q psy15186        144 KEIVYFFR  151 (151)
Q Consensus       144 ~~l~y~f~  151 (151)
                      +|++|+|-
T Consensus        76 ~r~~Y~F~   83 (85)
T PF00178_consen   76 QRLVYRFV   83 (85)
T ss_dssp             STTEEEES
T ss_pred             cEEEEecC
Confidence            79999993

The ets oncogene is such a factor, possessing a region of 85-90 amino acids known as the ETS (erythroblast transformation specific) domain [, , ]. This domain is rich in positively-charged and aromatic residues, and binds to purine-rich segments of DNA. The ETS domain has been identified in other transcription factors such as PU.1, human erg, human elf-1, human elk-1, GA binding protein, and a number of others [, , ]. It is generally localized at the C terminus of the protein, with the exception of ELF-1, ELK-1, ELK-3, ELK-4 and ERF where it is found at the N terminus. NMR-analysis of the structure of the Ets domains revealed that it contains three alpha-helixes (1-3) and four-stranded beta-sheets (1-4) arranged in the order alpha1-beta1-beta2-alpha2-alpha3-beta3-beta4 forming a winged helix-turn-helix (wHTH) topology []. The third alpha-helix is responsive to contact to the major groove of the DNA. Different members of the Ets family proteins display distinct DNA binding specificities. The Ets domains and the flanking amino acid sequences of the proteins influence the binding affinity, and the alteration of a single amino acid in the Ets domain can change its DNA binding specificities. Avian leukemia virus E26 is a replication defective retrovirus that induces a mixed erythroid/myeloid leukemia in chickens.This virus carries two distinct oncogenes: v-myb and v-ets. The ets portion of this oncogene is required for the induction of erythroblastosis. V-ets and c-ets-1, its cellular progenitor, have been shown [] to be nuclear DNA-binding proteins. Ets-1 differs slightly from v-ets at its carboxy-terminal region. In most species where it has been sequenced, c-ets-1 exists in various isoforms generated by alternative splicing and differential phosphorylation.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1DUX_F 4AVP_B 1HBX_G 1BC7_C 1K6O_A 1BC8_C 1PUE_E 1FLI_A 2DAO_A 1WWX_A ....

>KOG3805|consensus

Probab=99.97  E-value=5.9e-31  Score=221.50  Aligned_cols=82  Identities=41%  Similarity=0.737  Sum_probs=75.0

Q ss_pred             cchHHHHHHHhcCCCC-CCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         65 QIQLWQFLLELLSDST-NANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~-~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      +++|||||++||..|. ++.||+|+| .+|+|||.|++.||||||+||||+.|||||||||||.||++++. .   -..+
T Consensus       272 ~IhLwQFLkELL~sP~~~~~~IrWVDkdKGiFkiess~~lArlWG~RKNR~~MnYdKlsRslRqYyKkGii-k---K~ek  347 (361)
T KOG3805|consen  272 KIHLWQFLKELLYSPEQMGSCIRWVDKDKGIFKIESSEKLARLWGIRKNRKAMNYDKLSRSLRQYYKKGII-K---KPEK  347 (361)
T ss_pred             eeeHHHHHHHHHhChhhhchheEeeccCCceEEeecHHHHHHHhhhhcccccccHHHHHHHHHHHhhcCcc-c---cchh
Confidence            7999999999999998 999999999 68999999999999999999999999999999999999999742 1   1345


Q ss_pred             ccceeeec
Q psy15186        143 DKEIVYFF  150 (151)
Q Consensus       143 ~~~l~y~f  150 (151)
                      ++||||+|
T Consensus       348 kqrLvyqf  355 (361)
T KOG3805|consen  348 KQRLVYQF  355 (361)
T ss_pred             hhheeeee
Confidence            69999998

>KOG3804|consensus

Probab=99.94  E-value=7.2e-27  Score=203.12  Aligned_cols=81  Identities=38%  Similarity=0.715  Sum_probs=73.9

Q ss_pred             cchHHHHHHHhcCCCCC-CCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         65 QIQLWQFLLELLSDSTN-ANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~~-~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      ...||+||+.||.|+++ ...|.|++ ..|+|||||+++||||||.|||+.+||||||+|||||||++.|...|||    
T Consensus       293 ~t~LWefl~~lL~d~~~~p~~IkWedr~~GVFrvVds~a~arlWG~~Kn~~~MtYekmsRAlRyYYk~~IL~kv~G----  368 (390)
T KOG3804|consen  293 GTGLWEFLRQLLLDPNYNPGFIKWEDREKGVFRVVDSEALARLWGMHKNNSSMTYEKMSRALRYYYKREILRKVDG----  368 (390)
T ss_pred             cchHHHHHHHHhcCCCcCCccccccccCCCeeEEecccHHHHHhcCcCCCCCcCHHHHhHHhhhhhhcceeecCCC----
Confidence            35799999999999885 45999999 6899999999999999999999999999999999999999976655665    


Q ss_pred             ccceeeec
Q psy15186        143 DKEIVYFF  150 (151)
Q Consensus       143 ~~~l~y~f  150 (151)
                       |||||||
T Consensus       369 -qrLvyqF  375 (390)
T KOG3804|consen  369 -QRLVYQF  375 (390)
T ss_pred             -ceeeEEe
Confidence             7999999

>KOG3804|consensus

Probab=98.66  E-value=5.6e-09  Score=91.57  Aligned_cols=83  Identities=36%  Similarity=0.597  Sum_probs=69.6

Q ss_pred             cchHHHHHHHhcCCCC-CCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         65 QIQLWQFLLELLSDST-NANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~-~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      ...+|+||+.+|.|.. ....|.|+. .++.|+.+|...++.+||.++|++.|+|+.|.|++|+||.+.+.  .++.+ .
T Consensus       171 tp~~~~~l~~~~q~~~~~p~~~~~~~~~~~~~~~~~s~~~s~~~~a~sn~~~m~~~~m~~a~~~~~q~~il--~~~~~-~  247 (390)
T KOG3804|consen  171 TPYLWEFLLDLLQDSATCPKPIKWTQREKGCFKLVDSKAVSKLWGAHSNKPDMNYETMGRALRYYPQRGIL--AKVEG-V  247 (390)
T ss_pred             CcchHHHHhhhhhcccCCCcccccccccccccccccCccccccchhhccCccccccccccccccccCCccc--cccch-h
Confidence            6889999999999965 789999999 78999999999999999999999999999999999999999643  44431 1


Q ss_pred             ccceeeec
Q psy15186        143 DKEIVYFF  150 (151)
Q Consensus       143 ~~~l~y~f  150 (151)
                      .++.++++
T Consensus       248 ~~~~~~q~  255 (390)
T KOG3804|consen  248 LQRSCHQN  255 (390)
T ss_pred             hhhhcccC
Confidence            24555443

>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []

Probab=96.79  E-value=0.0017  Score=46.49  Aligned_cols=59  Identities=24%  Similarity=0.421  Sum_probs=42.6

Q ss_pred             HHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         71 FLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        71 FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      =|.+||+|++..++|.|.+.+..|.|.|++++++.-=.+ -=..-+|.++.|-|..|.=+
T Consensus         5 kL~~~l~~~~~~~~I~W~~~G~~fiI~d~~~f~~~vLp~-~F~~~~~~SF~RQLn~yGF~   63 (103)
T PF00447_consen    5 KLYEMLEDPENSDIIRWSPDGDSFIIHDPEEFEKEVLPK-YFKHSNFSSFVRQLNMYGFK   63 (103)
T ss_dssp             HHHHHHCTTTTTTTCEECTTSSEEEES-HHHHHHHTHHH-HSST--HHHHHHHHHHTTEE
T ss_pred             HHHHHHcCCCCCCEEEEeCCCCEEEEeecHHHhhhcccc-ccCccccceeeeEeeeeeeE
Confidence            356789999999999999999999999998887621111 11123699999999888544

Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....

>smart00415 HSF heat shock factor

Probab=96.60  E-value=0.0059  Score=44.13  Aligned_cols=59  Identities=25%  Similarity=0.391  Sum_probs=44.8

Q ss_pred             HHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         71 FLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        71 FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      =|.++|+|++..++|+|...+..|.|.|++++.+---.+- -..-+|.++-|-|-.|.=+
T Consensus         8 kL~~~l~~~~~~~iI~W~~~G~~f~I~d~~~f~~~vLp~~-Fk~~~~~SF~RqLn~yGF~   66 (105)
T smart00415        8 KLYLLVEDPSTDKIISWSPSGKSFVIWDPEEFAKNLLPRY-FKHNNFSSFVRQLNMYGFR   66 (105)
T ss_pred             HHHHHHhCCCCCCEEEECCCCCEEEEcCHHHHHHHHHHHh-cCCCCHHHHHHHHHhcCCE
Confidence            3567889999999999999888999999987765322221 1234599999999888655

>COG5169 HSF1 Heat shock transcription factor [Transcription]

Probab=93.32  E-value=0.065  Score=45.61  Aligned_cols=56  Identities=23%  Similarity=0.391  Sum_probs=39.8

Q ss_pred             HHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHH
Q psy15186         72 LLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHS  128 (151)
Q Consensus        72 Ll~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy  128 (151)
                      |.++|+|+++.++|+|+..+.-|-|.|+++.+..=..+--+ --|+..+-|-|--|-
T Consensus        17 Ly~iLe~~e~~k~I~Ws~~G~sfvI~~~~~F~~~iLpr~FK-h~NfaSFVRQLN~Yg   72 (282)
T COG5169          17 LYQILEEPEYYKLIQWSPDGRSFVILDPEEFTKVILPRYFK-HGNFASFVRQLNKYG   72 (282)
T ss_pred             HHHHhcCcccCCceEECCCCCEEEEeCcchhhhhhhhhhhc-ccCHHHHHHHHHhcC
Confidence            44668999999999999999999999988766543333221 124667777666553

>KOG0627|consensus

Probab=86.65  E-value=0.58  Score=39.33  Aligned_cols=38  Identities=24%  Similarity=0.491  Sum_probs=31.5

Q ss_pred             HHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcc
Q psy15186         72 LLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGER  109 (151)
Q Consensus        72 Ll~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~  109 (151)
                      |.++++|++..++|+|...+--|-|.||+++++.=-.+
T Consensus        19 ~y~~v~Dps~~~iisWs~~g~sFvv~d~~~F~~~~Lp~   56 (304)
T KOG0627|consen   19 LYEMVEDPSTDEIISWSPSGNSFVIWNPEEFAKVLLPL   56 (304)
T ss_pred             HHHHhcCCCCCCceEECCCCCccccCCHHHHHHHHhHH
Confidence            34678999999999999988899999999988654433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	151
1fli_A	98	Dna-Binding Domain Of Fli-1 Length = 98		2e-32
2ypr_A	102	Crystal Structure Of The Dna Binding Ets Domain Of		3e-30
2nny_A	171	Crystal Structure Of The Ets1 Dimer Dna Complex. Le		5e-24
3ri4_A	163	Ets1 Cooperative Binding To Widely Separated Sites		2e-23
1mdm_B	161	Inhibited Fragment Of Ets-1 And Paired Domain Of Pa		2e-23
2stt_A	96	Solution Nmr Structure Of The Human Ets1DNA COMPLEX		2e-23
1r36_A	140	Nmr-Based Structure Of Autoinhibited Murine Ets-1 D		2e-23
3mfk_A	162	Ets1 Complex With Stromelysin-1 Promoter Dna Length		2e-23
1md0_A	141	Crystal Structure Of An Inhibited Fragment Of Ets-1		2e-23
1gvj_A	146	Ets-1 Dna Binding And Autoinhibitory Domains Length		2e-23
1k78_B	110	Pax5(1-149)+ets-1(331-440)+dna Length = 110		1e-21
1awc_A	110	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		7e-20
4avp_A	106	Crystal Structure Of The Dna-Binding Domain Of Huma		2e-18
1dux_C	94	Elk-1DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM		7e-16
1bc7_C	93	Serum Response Factor Accessory Protein 1a (Sap-1)D		1e-11
1yo5_C	97	Analysis Of The 2.0a Crystal Structure Of The Prote		2e-11
1hbx_G	157	Ternary Complex Of Sap-1 And Srf With Specific Sre		3e-11
2dao_A	118	Solution Structure Of Ets Domain Transcriptional Fa		6e-11
2lf7_A	106	Intramolecular Regulation Of The Ets Domain Within		1e-10
2lf8_A	128	Intramolecular Regulation Of The Ets Domain Within		2e-10
1wwx_A	107	Solution Structure Of The Ets-Domain Of The Ets Dom		3e-07
3jtg_A	103	Crystal Structure Of Mouse Elf3 C-Terminal Dna-Bind		1e-06
1pue_E	89	Pu.1 Ets Domain-Dna Complex Length = 89		8e-05

>pdb|1FLI|A Chain A, Dna-Binding Domain Of Fli-1 Length = 98

Iteration: 1
 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLS
Sbjct: 2   GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLS 61
Query: 122 RALR 125
           RALR
Sbjct: 62  RALR 65

>pdb|2YPR|A Chain A, Crystal Structure Of The Dna Binding Ets Domain Of Human Protein Fev Length = 102

Iteration: 1
 Score =  127 bits (318), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 60/67 (89%)
Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           S  GSGQIQLWQFLLELL+D  NA CI WEG +GEFKLTDPDEVARRWGERKSKPNMNYD
Sbjct: 1   SMKGSGQIQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYD 60
Query: 119 KLSRALR 125
           KLSRALR
Sbjct: 61  KLSRALR 67

>pdb|2NNY|A Chain A, Crystal Structure Of The Ets1 Dimer Dna Complex. Length = 171

Iteration: 1
 Score =  106 bits (265), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 58/73 (79%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D ++ + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 52  PAAALAGYTGSGPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 111
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 112 PKMNYEKLSRGLR 124

>pdb|3RI4|A Chain A, Ets1 Cooperative Binding To Widely Separated Sites On Promoter Dna Length = 163

Iteration: 1
 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 44  PAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 103
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 104 PKMNYEKLSRGLR 116

>pdb|1MDM|B Chain B, Inhibited Fragment Of Ets-1 And Paired Domain Of Pax5 Bound To Dna Length = 161

Iteration: 1
 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 43  PAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 102
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 103 PKMNYEKLSRGLR 115

>pdb|2STT|A Chain A, Solution Nmr Structure Of The Human Ets1DNA COMPLEX, 25 Structures Length = 96

Iteration: 1
 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 54  AAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKP 113
           AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+KP
Sbjct: 4   AAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKP 63
Query: 114 NMNYDKLSRALRTH 127
            MNY+KLSR LR +
Sbjct: 64  KMNYEKLSRGLRYY 77

>pdb|1R36|A Chain A, Nmr-Based Structure Of Autoinhibited Murine Ets-1 Deltan301 Length = 140

Iteration: 1
 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 22  PAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 81
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 82  PKMNYEKLSRGLR 94

>pdb|3MFK|A Chain A, Ets1 Complex With Stromelysin-1 Promoter Dna Length = 162

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 43  PAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 102
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 103 PKMNYEKLSRGLR 115

>pdb|1MD0|A Chain A, Crystal Structure Of An Inhibited Fragment Of Ets-1 Length = 141

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 23  PAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 82
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 83  PKMNYEKLSRGLR 95

>pdb|1GVJ|A Chain A, Ets-1 Dna Binding And Autoinhibitory Domains Length = 146

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 53  SAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSK 112
            AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+K
Sbjct: 27  PAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNK 86
Query: 113 PNMNYDKLSRALR 125
           P MNY+KLSR LR
Sbjct: 87  PKMNYEKLSRGLR 99

>pdb|1K78|B Chain B, Pax5(1-149)+ets-1(331-440)+dna Length = 110

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+KP MNY+KLS
Sbjct: 1   GSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLS 60
Query: 122 RALR 125
           R LR
Sbjct: 61  RGLR 64

>pdb|1AWC|A Chain A, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 110

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 66  IQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALR 125
           IQLWQFLLELL+D    +CI+W G  GEFKL  P+ VA++WG+RK+KP MNY+KLSRALR
Sbjct: 1   IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALR 60
Query: 126 TH 127
            +
Sbjct: 61  YY 62

>pdb|4AVP|A Chain A, Crystal Structure Of The Dna-Binding Domain Of Human Etv1. Length = 106

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S   G +QLWQFL+ LL D +N++ I W G   EFKL +P+EVARRWG +K++P MNYD
Sbjct: 5   TSQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYD 64
Query: 119 KLSRALRTH 127
           KLSR+LR +
Sbjct: 65  KLSRSLRYY 73

>pdb|1DUX|C Chain C, Elk-1DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA- Binding Surface Affect Dna-Recognition Length = 94

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 66  IQLWQFLLELLSDSTNANCITWEGTNG-EFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 124
           + LWQFLL+LL +  N + I+W   +G EFKL D +EVAR WG RK+K NMNYDKLSRAL
Sbjct: 5   VTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRAL 64
Query: 125 RTH 127
           R +
Sbjct: 65  RYY 67

>pdb|1BC7|C Chain C, Serum Response Factor Accessory Protein 1a (Sap-1)DNA Complex Length = 93

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 81  NANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTH 127
           N + I W   +G+FKL   +EVAR WG RK+KPNMNYDKLSRALR +
Sbjct: 20  NKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYY 66

>pdb|1YO5|C Chain C, Analysis Of The 2.0a Crystal Structure Of The Protein-Dna Complex Of Human Pdef Ets Domain Bound To The Prostate Specific Antigen Regulatory Site Length = 97

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 56  GIQSSTGSGQIQLWQFLLELL-SDSTNANCITW-EGTNGEFKLTDPDEVARRWGERKSKP 113
           G   + GS  I LWQFL ELL    +    I W     G FK+ D  +VAR WG RK++P
Sbjct: 1   GSLDALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRP 60
Query: 114 NMNYDKLSRALRTHSRR--LRKIFIPGLGNIDKEIVYFF 150
            MNYDKLSR++R + ++  +RK       +I + +VY F
Sbjct: 61  AMNYDKLSRSIRQYYKKGIIRK------PDISQRLVYQF 93

>pdb|1HBX|G Chain G, Ternary Complex Of Sap-1 And Srf With Specific Sre Dna Length = 157

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 81  NANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALR 125
           N + I W   +G+FKL   +EVAR WG RK+KPNMNYDKLSRALR
Sbjct: 21  NKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALR 65

>pdb|2DAO|A Chain A, Solution Structure Of Ets Domain Transcriptional Factor Etv6 Protein Length = 118

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGE-FKLTDPDEVARRWGERKSKPNMNY 117
           SS  SG   LW ++ +LLSDS   N I WE    + F++ DP+ +AR WG  K++ NM Y
Sbjct: 2   SSGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTY 61
Query: 118 DKLSRALR 125
           +K+SRALR
Sbjct: 62  EKMSRALR 69

>pdb|2LF7|A Chain A, Intramolecular Regulation Of The Ets Domain Within Etv6 Sequence R335 To Q436 Length = 106

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGE-FKLTDPDEVARRWGERKSKPNMNYDKL 120
           GS    LW ++ +LLSDS   N I WE    + F++ DP+ +AR WG  K++ NM Y+K+
Sbjct: 1   GSHMRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKM 60
Query: 121 SRALR 125
           SRALR
Sbjct: 61  SRALR 65

>pdb|2LF8|A Chain A, Intramolecular Regulation Of The Ets Domain Within Etv6 Sequence R335 To R458 Length = 128

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGE-FKLTDPDEVARRWGERKSKPNMNYDKL 120
           GS    LW ++ +LLSDS   N I WE    + F++ DP+ +AR WG  K++ NM Y+K+
Sbjct: 1   GSHMRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKM 60
Query: 121 SRALR 125
           SRALR
Sbjct: 61  SRALR 65

>pdb|1WWX|A Chain A, Solution Structure Of The Ets-Domain Of The Ets Domain Transcription Factor Length = 107

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 67  QLWQFLLELL-SDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 124
            LW+F+ +LL S   N   + WE    G F++   + +A+ WG+RK    M Y+KLSRAL
Sbjct: 10  HLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRAL 69
Query: 125 RTHSRRLRKIFIPGLGNIDKEIVYFF 150
           R + +         L  +D+ +VY F
Sbjct: 70  RYYYK------TGILERVDRRLVYKF 89

>pdb|3JTG|A Chain A, Crystal Structure Of Mouse Elf3 C-Terminal Dna-Binding Domai Complex With Type Ii Tgf-Beta Receptor Promoter Dna Length = 103

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 67  QLWQFLLELL-SDSTNANCITWEGTN-GEFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 124
            LW+F+ ++L     N   + WE  + G FK    + VA+ WG++K   NM Y+KLSRA+
Sbjct: 6   HLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAM 65
Query: 125 RTHSRR 130
           R + +R
Sbjct: 66  RYYYKR 71

>pdb|1PUE|E Chain E, Pu.1 Ets Domain-Dna Complex Length = 89

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 65  QIQLWQFLLELLSDSTNANCITW-EGTNGEFKLTD--PDEVARRWGERK-SKPNMNYDKL 120
           +I+L+QFLL+LL      + I W +   G F+ +    + +A RWG +K ++  M Y+K+
Sbjct: 1   KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKM 60
Query: 121 SRALRTHSR 129
           +RALR + +
Sbjct: 61  ARALRNYGK 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	151
1fli_A	98	FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP:	4e-30
1fli_A	98	FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP:	3e-04
1yo5_C	97	SAM pointed domain containing ETS transcription fa	2e-28
1wwx_A	107	E74-like factor 5 ESE-2B; DNA binding, transcripti	3e-27
2lf8_A	128	Transcription factor ETV6; auto-inhibition; NMR {M	4e-27
1bc8_C	93	SAP-1, protein (SAP-1 ETS domain); DNA-binding dom	1e-26
1hbx_G	157	ETS-domain protein ELK-4; gene regulation, transcr	2e-26
2nny_A	171	C-ETS-1 protein, P54; protein-DNA complex, transcr	2e-26
1gvj_A	146	C-ETS-1 protein, P54; transcription, autoinhibitio	2e-26
2dao_A	118	Transcription factor ETV6; ETS domain, structural	4e-26
1awc_A	110	Protein (GA binding protein alpha); complex (trans	2e-25
4avp_A	106	ETS translocation variant 1; transcription, transc	3e-25
3jtg_A	103	ETS-related transcription factor ELF-3; ELF3, prot	5e-24
1pue_E	89	Protein (transcription factor PU.1 (TF PU.1)); com	6e-23

>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21 Length = 98

 Score =  103 bits (259), Expect = 4e-30
 Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 2/75 (2%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLS
Sbjct: 2   GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLS 61

Query: 122 RALRTHSRR--LRKI 134
           RALR +  +  + K+
Sbjct: 62  RALRYYYDKNIMTKV 76

>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21 Length = 98

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 20/25 (80%), Positives = 21/25 (84%)

Query: 1  MTKVHGKRYAYKFDFQGLAAATQPA 25
          MTKVHGKRYAYKFDF G+A A QP 
Sbjct: 73 MTKVHGKRYAYKFDFHGIAQALQPH 97

>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21 Length = 97

 Score = 99.7 bits (248), Expect = 2e-28
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 56  GIQSSTGSGQIQLWQFLLELLSDS-TNANCITWE-GTNGEFKLTDPDEVARRWGERKSKP 113
           G   + GS  I LWQFL ELL    +    I W     G FK+ D  +VAR WG RK++P
Sbjct: 1   GSLDALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRP 60

Query: 114 NMNYDKLSRALRTHSRR 130
            MNYDKLSR++R + ++
Sbjct: 61  AMNYDKLSRSIRQYYKK 77

>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21 Length = 107

 Score = 97.0 bits (241), Expect = 3e-27
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 59  SSTGSGQIQLWQFLLELLSD-STNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMN 116
           SS  SG   LW+F+ +LL     N   + WE    G F++   + +A+ WG+RK    M 
Sbjct: 2   SSGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMT 61

Query: 117 YDKLSRALRTHSRR--LRKI 134
           Y+KLSRALR + +   L ++
Sbjct: 62  YEKLSRALRYYYKTGILERV 81

>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus} Length = 128

 Score = 97.6 bits (242), Expect = 4e-27
 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNG-EFKLTDPDEVARRWGERKSKPNMNYDKL 120
           GS    LW ++ +LLSDS   N I WE      F++ DP+ +AR WG  K++ NM Y+K+
Sbjct: 1   GSHMRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKM 60

Query: 121 SRALRTHSRR 130
           SRALR + + 
Sbjct: 61  SRALRHYYKL 70

>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C* Length = 93

 Score = 95.1 bits (236), Expect = 1e-26
 Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 64  GQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRA 123
             I LWQFLL+LL    N + I W   +G+FKL   +EVAR WG RK+KPNMNYDKLSRA
Sbjct: 3   SAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRA 62

Query: 124 LRTHSRR--LRKI 134
           LR +  +  ++K+
Sbjct: 63  LRYYYVKNIIKKV 75

>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21 Length = 157

 Score = 96.8 bits (240), Expect = 2e-26
 Identities = 38/69 (55%), Positives = 46/69 (66%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
               I LWQFLL+LL    N + I W   +G+FKL   +EVAR WG RK+KPNMNYDKLS
Sbjct: 2   SDSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLS 61

Query: 122 RALRTHSRR 130
           RALR +  +
Sbjct: 62  RALRYYYVK 70

>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B Length = 171

 Score = 96.9 bits (240), Expect = 2e-26
 Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 5/99 (5%)

Query: 52  SSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKS 111
             AA +   TGSG IQLWQFLLELL+D ++ + I+W G   EFKL+DPDEVARRWG+RK+
Sbjct: 51  IPAAALAGYTGSGPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKN 110

Query: 112 KPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFF 150
           KP MNY+KLSR LR +  +       G     K  VY F
Sbjct: 111 KPKMNYEKLSRGLRYYYDKNIIHKTAG-----KRYVYRF 144

>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A* Length = 146

 Score = 96.0 bits (238), Expect = 2e-26
 Identities = 54/99 (54%), Positives = 65/99 (65%), Gaps = 5/99 (5%)

Query: 52  SSAAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKS 111
             AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+
Sbjct: 26  IPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKN 85

Query: 112 KPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFF 150
           KP MNY+KLSR LR +    + I     G   K  VY F
Sbjct: 86  KPKMNYEKLSRGLRYYYD--KNIIHKTAG---KRYVYRF 119

>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 94.5 bits (234), Expect = 4e-26
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNG-EFKLTDPDEVARRWGERKSKPNMNY 117
           SS  SG   LW ++ +LLSDS   N I WE      F++ DP+ +AR WG  K++ NM Y
Sbjct: 2   SSGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTY 61

Query: 118 DKLSRALRTHSRR 130
           +K+SRALR + + 
Sbjct: 62  EKMSRALRHYYKL 74

>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21 Length = 110

 Score = 92.5 bits (229), Expect = 2e-25
 Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 5/85 (5%)

Query: 66  IQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALR 125
           IQLWQFLLELL+D    +CI+W G  GEFKL  P+ VA++WG+RK+KP MNY+KLSRALR
Sbjct: 1   IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALR 60

Query: 126 THSRRLRKIFIPGLGNIDKEIVYFF 150
            +        + G     K  VY F
Sbjct: 61  YYYDGDMICKVQG-----KRFVYKF 80

>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} Length = 106

 Score = 91.8 bits (227), Expect = 3e-25
 Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 5/92 (5%)

Query: 59  SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYD 118
           +S   G +QLWQFL+ LL D +N++ I W G   EFKL +P+EVARRWG +K++P MNYD
Sbjct: 5   TSQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYD 64

Query: 119 KLSRALRTHSRRLRKIFIPGLGNIDKEIVYFF 150
           KLSR+LR +    + I     G   +  VY F
Sbjct: 65  KLSRSLRYYYE--KGIMQKVAG---ERYVYKF 91

>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} Length = 103

 Score = 88.6 bits (219), Expect = 5e-24
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 65  QIQLWQFLLELLSDS-TNANCITWEGTN-GEFKLTDPDEVARRWGERKSKPNMNYDKLSR 122
              LW+F+ ++L     N   + WE  + G FK    + VA+ WG++K   NM Y+KLSR
Sbjct: 4   GTHLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSR 63

Query: 123 ALRTHSRR 130
           A+R + +R
Sbjct: 64  AMRYYYKR 71

>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21 Length = 89

 Score = 85.5 bits (211), Expect = 6e-23
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 65  QIQLWQFLLELLSDSTNANCITWEGTN---GEFKLTDPDEVARRWGERKS-KPNMNYDKL 120
           +I+L+QFLL+LL      + I W   +    +F     + +A RWG +K  +  M Y+K+
Sbjct: 1   KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKM 60

Query: 121 SRALRTHSRR 130
           +RALR + + 
Sbjct: 61  ARALRNYGKT 70

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	151
1fli_A	98	FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP:	100.0
2ypr_A	102	Protein FEV; transcription; 2.64A {Homo sapiens} P	100.0
1wwx_A	107	E74-like factor 5 ESE-2B; DNA binding, transcripti	100.0
1bc8_C	93	SAP-1, protein (SAP-1 ETS domain); DNA-binding dom	100.0
1yo5_C	97	SAM pointed domain containing ETS transcription fa	100.0
4avp_A	106	ETS translocation variant 1; transcription, transc	100.0
2dao_A	118	Transcription factor ETV6; ETS domain, structural	100.0
1awc_A	110	Protein (GA binding protein alpha); complex (trans	100.0
1gvj_A	146	C-ETS-1 protein, P54; transcription, autoinhibitio	100.0
1pue_E	89	Protein (transcription factor PU.1 (TF PU.1)); com	100.0
2lf8_A	128	Transcription factor ETV6; auto-inhibition; NMR {M	100.0
1hbx_G	157	ETS-domain protein ELK-4; gene regulation, transcr	100.0
2nny_A	171	C-ETS-1 protein, P54; protein-DNA complex, transcr	100.0
3jtg_A	103	ETS-related transcription factor ELF-3; ELF3, prot	100.0
2ldu_A	125	Heat shock factor protein 1; structural genomics,	96.31
1hks_A	106	Heat-shock transcription factor; transcription reg	96.09
3hts_B	102	Heat shock transcription factor; transcription reg	95.58
1awc_A	110	Protein (GA binding protein alpha); complex (trans	92.36
2dao_A	118	Transcription factor ETV6; ETS domain, structural	90.9
2lf8_A	128	Transcription factor ETV6; auto-inhibition; NMR {M	89.93
1hbx_G	157	ETS-domain protein ELK-4; gene regulation, transcr	88.02

>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21

Probab=100.00  E-value=4.1e-41  Score=242.10  Aligned_cols=86  Identities=76%  Similarity=1.172  Sum_probs=79.1

Q ss_pred             CCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCC
Q psy15186         61 TGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLG  140 (151)
Q Consensus        61 ~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~  140 (151)
                      +|+|+++||+||++||+|+++.+||+|||++|||||+||++||+|||.+||+|+||||||||||||||+++++..|+  +
T Consensus         1 ~gsg~~~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyYY~k~i~~Kv~--g   78 (98)
T 1fli_A            1 PGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVH--G   78 (98)
T ss_dssp             CCCSSCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHHHTTSCCCBG--G
T ss_pred             CCCCceeHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHHcCcEeecC--C
Confidence            48899999999999999999999999999899999999999999999999999999999999999999997543333  2


Q ss_pred             CcccceeeecC
Q psy15186        141 NIDKEIVYFFR  151 (151)
Q Consensus       141 ~i~~~l~y~f~  151 (151)
                         +|+||+|-
T Consensus        79 ---kr~vY~F~   86 (98)
T 1fli_A           79 ---KRYAYKFD   86 (98)
T ss_dssp             ---GSSBCCCC
T ss_pred             ---CeEEEEec
Confidence               79999993

>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A

Probab=100.00  E-value=6.3e-40  Score=237.66  Aligned_cols=86  Identities=71%  Similarity=1.122  Sum_probs=79.3

Q ss_pred             CCCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCC
Q psy15186         60 STGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGL  139 (151)
Q Consensus        60 ~~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~  139 (151)
                      -+|+|+++|||||++||+|+++.+||+|++++|||+|+||++||+|||.+||||+||||||||||||||++++...|+  
T Consensus         2 ~~g~g~i~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~--   79 (102)
T 2ypr_A            2 MKGSGQIQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVH--   79 (102)
T ss_dssp             -CCCSSCCHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECS--
T ss_pred             cCCCCcEeHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecC--
Confidence            368999999999999999999999999999899999999999999999999999999999999999999997554444  


Q ss_pred             CCcccceeeec
Q psy15186        140 GNIDKEIVYFF  150 (151)
Q Consensus       140 ~~i~~~l~y~f  150 (151)
                      |   +|+||+|
T Consensus        80 G---kr~vYkF   87 (102)
T 2ypr_A           80 G---KRYAYRF   87 (102)
T ss_dssp             S---CSSEEEE
T ss_pred             C---CeEEEEe
Confidence            3   7999999

>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21

Probab=100.00  E-value=9.6e-40  Score=238.12  Aligned_cols=87  Identities=37%  Similarity=0.702  Sum_probs=78.6

Q ss_pred             cCCCCCcchHHHHHHHhcCCCC-CCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhcc
Q psy15186         59 SSTGSGQIQLWQFLLELLSDST-NANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFI  136 (151)
Q Consensus        59 s~~g~G~~~Lw~FLl~LL~d~~-~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~  136 (151)
                      +++++|+++|||||++||.|++ +.+||+||+ .+|||||+||++||+|||.+||+|+||||||||||||||+++++   
T Consensus         2 ~sg~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~~~ii---   78 (107)
T 1wwx_A            2 SSGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGIL---   78 (107)
T ss_dssp             CCCCCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSE---
T ss_pred             CCCCCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcE---
Confidence            4678999999999999999986 789999999 58999999999999999999999999999999999999999743   


Q ss_pred             CCCCCcccceeeecC
Q psy15186        137 PGLGNIDKEIVYFFR  151 (151)
Q Consensus       137 p~~~~i~~~l~y~f~  151 (151)
                         .++.+|+||+|-
T Consensus        79 ---~Kv~~rlvY~F~   90 (107)
T 1wwx_A           79 ---ERVDRRLVYKFG   90 (107)
T ss_dssp             ---ECCSSSSEEEEC
T ss_pred             ---EeccceEEEEeC
Confidence               344479999993

>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*

Probab=100.00  E-value=9e-40  Score=233.22  Aligned_cols=84  Identities=50%  Similarity=0.822  Sum_probs=77.4

Q ss_pred             CCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         63 SGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        63 ~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      .|+++||+||++||.|+++++||+|||++|||+++||++||+|||.+||+|+||||||||||||||++++...|+|    
T Consensus         2 ~~~i~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g----   77 (93)
T 1bc8_C            2 DSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNG----   77 (93)
T ss_dssp             CCCCCHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTT----
T ss_pred             CCcccHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCC----
Confidence            4789999999999999999999999998899999999999999999999999999999999999999976544443    


Q ss_pred             ccceeeecC
Q psy15186        143 DKEIVYFFR  151 (151)
Q Consensus       143 ~~~l~y~f~  151 (151)
                       ||+||+|-
T Consensus        78 -~r~vY~F~   85 (93)
T 1bc8_C           78 -QKFVYKFV   85 (93)
T ss_dssp             -STTEEEET
T ss_pred             -CeEEEEeC
Confidence             79999993

>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21

Probab=100.00  E-value=5.9e-40  Score=235.75  Aligned_cols=90  Identities=42%  Similarity=0.683  Sum_probs=75.5

Q ss_pred             ccCCCCCcchHHHHHHHhcCCCC-CCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhc
Q psy15186         58 QSSTGSGQIQLWQFLLELLSDST-NANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIF  135 (151)
Q Consensus        58 ~s~~g~G~~~Lw~FLl~LL~d~~-~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~  135 (151)
                      ...+++|+++|||||++||+|++ +++||+||+ ++|||+|+||++||+|||.+||+|+||||||||||||||++++...
T Consensus         3 ~~~~~~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~~~ii~K   82 (97)
T 1yo5_C            3 LDALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKKGIIRK   82 (97)
T ss_dssp             ------CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTTTSEEC
T ss_pred             cCCCCCCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEee
Confidence            34567889999999999999985 799999998 6899999999999999999999999999999999999999975433


Q ss_pred             cCCCCCcccceeeecC
Q psy15186        136 IPGLGNIDKEIVYFFR  151 (151)
Q Consensus       136 ~p~~~~i~~~l~y~f~  151 (151)
                      |+    +.||+||+|-
T Consensus        83 v~----~g~r~vY~F~   94 (97)
T 1yo5_C           83 PD----ISQRLVYQFV   94 (97)
T ss_dssp             CS----SCCTTEEEES
T ss_pred             cc----CCcEEEEecC
Confidence            32    1279999993

>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A

Probab=100.00  E-value=1e-38  Score=232.72  Aligned_cols=86  Identities=50%  Similarity=0.876  Sum_probs=76.3

Q ss_pred             CCCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCC
Q psy15186         60 STGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGL  139 (151)
Q Consensus        60 ~~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~  139 (151)
                      ..++|+++|||||++||+|+++++||+|||+++||+++||++||+|||.+||+++||||||||||||||++++...|+| 
T Consensus         6 ~~~~g~i~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G-   84 (106)
T 4avp_A            6 SQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG-   84 (106)
T ss_dssp             -----CCCHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTT-
T ss_pred             CCCCCcEeHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCC-
Confidence            4678999999999999999999999999998899999999999999999999999999999999999999986544443 


Q ss_pred             CCcccceeeec
Q psy15186        140 GNIDKEIVYFF  150 (151)
Q Consensus       140 ~~i~~~l~y~f  150 (151)
                          +|+||+|
T Consensus        85 ----~r~vYkF   91 (106)
T 4avp_A           85 ----ERYVYKF   91 (106)
T ss_dssp             ----CSSEEEE
T ss_pred             ----CeEEEEe
Confidence                7999999

>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=235.39  Aligned_cols=86  Identities=40%  Similarity=0.712  Sum_probs=78.2

Q ss_pred             CCCCCcchHHHHHHHhcCCCCCCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCC
Q psy15186         60 STGSGQIQLWQFLLELLSDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPG  138 (151)
Q Consensus        60 ~~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~  138 (151)
                      +.-+|.++||+||++||.|+++.+||+||+ ..|||||+||++||+|||.+||+|+||||||||||||||++++...|++
T Consensus         3 ~~~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G   82 (118)
T 2dao_A            3 SGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPG   82 (118)
T ss_dssp             CCCCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSS
T ss_pred             CccCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccC
Confidence            455789999999999999999999999999 5689999999999999999999999999999999999999975544443


Q ss_pred             CCCcccceeeec
Q psy15186        139 LGNIDKEIVYFF  150 (151)
Q Consensus       139 ~~~i~~~l~y~f  150 (151)
                           ||+||+|
T Consensus        83 -----~r~vY~F   89 (118)
T 2dao_A           83 -----QRLLFRF   89 (118)
T ss_dssp             -----SSSEEEE
T ss_pred             -----CeEEEEe
Confidence                 7999999

>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21

Probab=100.00  E-value=3.4e-38  Score=230.81  Aligned_cols=80  Identities=56%  Similarity=0.990  Sum_probs=74.6

Q ss_pred             chHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCcccc
Q psy15186         66 IQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKE  145 (151)
Q Consensus        66 ~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~~~  145 (151)
                      ++|||||++||.|+++.+||+|||++|||+|+||++||+|||.+||+|+||||||||||||||++++...|+|     +|
T Consensus         1 i~LwqFLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~G-----kr   75 (110)
T 1awc_A            1 IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQG-----KR   75 (110)
T ss_dssp             CCHHHHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGGSSSEEECTT-----ST
T ss_pred             CcHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHHhcCCEeeccC-----Ce
Confidence            5899999999999999999999998899999999999999999999999999999999999999975544443     79


Q ss_pred             eeeec
Q psy15186        146 IVYFF  150 (151)
Q Consensus       146 l~y~f  150 (151)
                      +||+|
T Consensus        76 lvY~F   80 (110)
T 1awc_A           76 FVYKF   80 (110)
T ss_dssp             TEEEE
T ss_pred             eEEec
Confidence            99999

>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*

Probab=100.00  E-value=6.2e-38  Score=239.00  Aligned_cols=85  Identities=60%  Similarity=0.969  Sum_probs=79.1

Q ss_pred             CCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCC
Q psy15186         61 TGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLG  140 (151)
Q Consensus        61 ~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~  140 (151)
                      .++|+++||+||++||+|+++.+||+|+|+++||+++||++||+|||.+||+|+||||||||||||||++++...|+  +
T Consensus        35 ~~sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~--G  112 (146)
T 1gvj_A           35 TGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTA--G  112 (146)
T ss_dssp             HTCCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECT--T
T ss_pred             CCCCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecC--C
Confidence            57899999999999999999999999999999999999999999999999999999999999999999997554444  3


Q ss_pred             Ccccceeeec
Q psy15186        141 NIDKEIVYFF  150 (151)
Q Consensus       141 ~i~~~l~y~f  150 (151)
                         +|+||+|
T Consensus       113 ---krlvY~F  119 (146)
T 1gvj_A          113 ---KRYVYRF  119 (146)
T ss_dssp             ---SSSEEEE
T ss_pred             ---CeEEEEe
Confidence               7999999

>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21

Probab=100.00  E-value=5.9e-38  Score=222.41  Aligned_cols=81  Identities=33%  Similarity=0.703  Sum_probs=73.3

Q ss_pred             cchHHHHHHHhcCCCCCCCcccccC-CCceEEec--ChHHHHHHhhccc-CCCCCcHHHHHHHHHHHHHhhhhhccCCCC
Q psy15186         65 QIQLWQFLLELLSDSTNANCITWEG-TNGEFKLT--DPDEVARRWGERK-SKPNMNYDKLSRALRTHSRRLRKIFIPGLG  140 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~--d~~~vArlWG~~k-~~~~m~YdklsRaLR~yy~k~~~~~~p~~~  140 (151)
                      +++|||||++||+|+++.+||+||| .+|||+|+  ||++||+|||.+| |+|+||||||||||||||++++.      .
T Consensus         1 ~i~LwqFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY~~~ii------~   74 (89)
T 1pue_E            1 KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEV------K   74 (89)
T ss_dssp             CCCHHHHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHSSE------E
T ss_pred             CccHHHHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHcCce------e
Confidence            4789999999999999999999998 67999997  7999999999999 78999999999999999999754      3


Q ss_pred             CcccceeeecC
Q psy15186        141 NIDKEIVYFFR  151 (151)
Q Consensus       141 ~i~~~l~y~f~  151 (151)
                      ++.+|+||+|-
T Consensus        75 Kv~~r~vY~F~   85 (89)
T 1pue_E           75 KVKKKLTYQFS   85 (89)
T ss_dssp             ECSSTTEEEEC
T ss_pred             eccceEEEeec
Confidence            44469999993

>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}

Probab=100.00  E-value=1.4e-38  Score=237.66  Aligned_cols=84  Identities=39%  Similarity=0.723  Sum_probs=78.0

Q ss_pred             CCCcchHHHHHHHhcCCCCCCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCC
Q psy15186         62 GSGQIQLWQFLLELLSDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLG  140 (151)
Q Consensus        62 g~G~~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~  140 (151)
                      |+|+++|||||++||.|+++.+||+||| ..|||||+||++||+|||.+||+|+||||||||||||||++++...|+|  
T Consensus         1 ~s~~~~LWqFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyYY~k~Ii~Kv~G--   78 (128)
T 2lf8_A            1 GSHMRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPG--   78 (128)
Confidence            6789999999999999999999999999 5689999999999999999999999999999999999999986544443  


Q ss_pred             Ccccceeeec
Q psy15186        141 NIDKEIVYFF  150 (151)
Q Consensus       141 ~i~~~l~y~f  150 (151)
                         ||+||+|
T Consensus        79 ---qrlvY~F   85 (128)
T 2lf8_A           79 ---QRLLFRF   85 (128)
Confidence               8999999

>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21

Probab=100.00  E-value=2e-37  Score=237.90  Aligned_cols=83  Identities=51%  Similarity=0.840  Sum_probs=77.2

Q ss_pred             CCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         63 SGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        63 ~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      .|+++||+||++||.|+++.+||+||+++|||||+||++||+|||.+||+|+||||||||||||||++++...|+|    
T Consensus         3 ~~~i~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~G----   78 (157)
T 1hbx_G            3 DSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNG----   78 (157)
T ss_dssp             CCCCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSS----
T ss_pred             CCcccHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCC----
Confidence            5789999999999999999999999998899999999999999999999999999999999999999975544443    


Q ss_pred             ccceeeec
Q psy15186        143 DKEIVYFF  150 (151)
Q Consensus       143 ~~~l~y~f  150 (151)
                       ||+||+|
T Consensus        79 -qrlvYkF   85 (157)
T 1hbx_G           79 -QKFVYKF   85 (157)
T ss_dssp             -CTTEEEE
T ss_pred             -CeEEEee
Confidence             8999999

>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B

Probab=100.00  E-value=2.3e-37  Score=240.75  Aligned_cols=86  Identities=59%  Similarity=0.961  Sum_probs=79.4

Q ss_pred             CCCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCC
Q psy15186         60 STGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGL  139 (151)
Q Consensus        60 ~~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~  139 (151)
                      ..++|+++|||||++||.|+++.+||+|||+++||+++||++||||||.+||+++||||||||||||||++++...|+  
T Consensus        59 ~~~sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~--  136 (171)
T 2nny_A           59 YTGSGPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTA--  136 (171)
T ss_dssp             HHTCSSCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECT--
T ss_pred             CCCCCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecC--
Confidence            357899999999999999999999999999999999999999999999999999999999999999999997554444  


Q ss_pred             CCcccceeeec
Q psy15186        140 GNIDKEIVYFF  150 (151)
Q Consensus       140 ~~i~~~l~y~f  150 (151)
                      +   ||+||+|
T Consensus       137 G---krlvY~F  144 (171)
T 2nny_A          137 G---KRYVYRF  144 (171)
T ss_dssp             T---STTEEEE
T ss_pred             C---CeEEEEe
Confidence            3   7999999

>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21

Probab=100.00  E-value=1.2e-36  Score=220.76  Aligned_cols=82  Identities=35%  Similarity=0.703  Sum_probs=73.6

Q ss_pred             cchHHHHHHHhcCCCC-CCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         65 QIQLWQFLLELLSDST-NANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~-~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      .++|||||++||.|++ +.+||+|+| ..|||+|+||++||+|||.+||+|+||||||||||||||++++.-.|+|    
T Consensus         4 ~~~LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G----   79 (103)
T 3jtg_A            4 GTHLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDG----   79 (103)
T ss_dssp             CCSHHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTT----
T ss_pred             cccHHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCC----
Confidence            3589999999999987 789999999 5799999999999999999999999999999999999999975433333    


Q ss_pred             ccceeeecC
Q psy15186        143 DKEIVYFFR  151 (151)
Q Consensus       143 ~~~l~y~f~  151 (151)
                       +|+||+|-
T Consensus        80 -~r~vY~F~   87 (103)
T 3jtg_A           80 -RRLVYKFG   87 (103)
T ss_dssp             -CTTEEEBC
T ss_pred             -ceEEEEeC
Confidence             89999993

>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=96.31  E-value=0.0025  Score=46.80  Aligned_cols=61  Identities=21%  Similarity=0.290  Sum_probs=46.2

Q ss_pred             HHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHH-HhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         68 LWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVAR-RWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        68 Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vAr-lWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      .-.=|.++|+|++..++|+|...+..|.|.|++++++ +--..  -..-||.++-|-|-.|.=+
T Consensus        20 F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~y--Fkh~nfsSFvRQLN~YGF~   81 (125)
T 2ldu_A           20 FLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY--FKHNNMASFVRQLNMYGFR   81 (125)
T ss_dssp             HHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHH--SSCCCHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHh--cCCCcHHHHHHHhcccCce
Confidence            3344456788999999999999999999999998875 22211  2345799999999888655

>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A

Probab=96.09  E-value=0.0055  Score=43.53  Aligned_cols=59  Identities=17%  Similarity=0.237  Sum_probs=44.7

Q ss_pred             HHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         71 FLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        71 FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      =|.++|+|++..++|+|...+..|.|.|++++++-==. +--..-+|.++-|-|-.|.=+
T Consensus        10 KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp-~yFkh~n~~SFvRQLN~YGF~   68 (106)
T 1hks_A           10 KLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLP-LNYKHNNMASFIRQLNMYGFH   68 (106)
T ss_dssp             HHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTST-TTTSCCCHHHHHHHHHHHCCC
T ss_pred             HHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhH-HhcCCCcHHHHHHhhhcCCCe
Confidence            34577899999999999998889999999877642111 112345899999999888655

>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A

Probab=95.58  E-value=0.014  Score=41.54  Aligned_cols=64  Identities=14%  Similarity=0.230  Sum_probs=47.1

Q ss_pred             chHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         66 IQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        66 ~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      ...-.=|.++|+|++..++|+|...+..|.|.|++++++.==. +--..-+|.++-|-|-.|.=+
T Consensus        13 p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp-~yFkh~nfsSFvRQLN~YGF~   76 (102)
T 3hts_B           13 PAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLP-KYFKHSNFASFVRQLNMYGWH   76 (102)
T ss_dssp             CHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHH-HHCSSCCHHHHHHHHHHTTEE
T ss_pred             CcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHH-HhcCCCcHHHHHHHhhcCCce
Confidence            3444555677899999999999998899999999888752111 112346799999999888544

>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21

Probab=92.36  E-value=0.027  Score=40.77  Aligned_cols=15  Identities=53%  Similarity=0.972  Sum_probs=13.4

Q ss_pred             CcccCCeeeeeeecc
Q psy15186          1 MTKVHGKRYAYKFDF   15 (151)
Q Consensus         1 ~~~~~~~~~~~~~~~   15 (151)
                      |.||||+||.|+|..
T Consensus        68 i~Kv~GkrlvY~F~~   82 (110)
T 1awc_A           68 ICKVQGKRFVYKFVC   82 (110)
T ss_dssp             EEECTTSTTEEEECS
T ss_pred             EeeccCCeeEEecCC
Confidence            689999999999973

>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.90  E-value=0.053  Score=39.64  Aligned_cols=14  Identities=29%  Similarity=0.617  Sum_probs=12.9

Q ss_pred             CcccCCeeeeeeec
Q psy15186          1 MTKVHGKRYAYKFD   14 (151)
Q Consensus         1 ~~~~~~~~~~~~~~   14 (151)
                      |.||||+||.|+|-
T Consensus        77 i~Kv~G~r~vY~F~   90 (118)
T 2dao_A           77 IRKEPGQRLLFRFM   90 (118)
T ss_dssp             EECCSSSSSEEEEC
T ss_pred             EEeccCCeEEEEec
Confidence            68999999999995

>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}

Probab=89.93  E-value=0.05  Score=40.32  Aligned_cols=14  Identities=29%  Similarity=0.617  Sum_probs=12.8

Q ss_pred             CcccCCeeeeeeec
Q psy15186          1 MTKVHGKRYAYKFD   14 (151)
Q Consensus         1 ~~~~~~~~~~~~~~   14 (151)
                      |.||||+||.|+|-
T Consensus        73 i~Kv~GqrlvY~F~   86 (128)
T 2lf8_A           73 IRKEPGQRLLFRFM   86 (128)
Confidence            78999999999993

>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21

Probab=88.02  E-value=0.11  Score=39.63  Aligned_cols=14  Identities=43%  Similarity=0.987  Sum_probs=12.8

Q ss_pred             CcccCCeeeeeeec
Q psy15186          1 MTKVHGKRYAYKFD   14 (151)
Q Consensus         1 ~~~~~~~~~~~~~~   14 (151)
                      |.||||+||.|+|.
T Consensus        73 i~KV~GqrlvYkF~   86 (157)
T 1hbx_G           73 IKKVNGQKFVYKFV   86 (157)
T ss_dssp             EEECSSCTTEEEES
T ss_pred             EEecCCCeEEEeeC
Confidence            67999999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	151
d1flia_	98	a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId:	1e-36
d1flia_	98	a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId:	1e-04
d1gvja_	142	a.4.5.21 (A:) ETS-1 transcription factor, residues	4e-35
d1awca_	110	a.4.5.21 (A:) GA binding protein (GABP) alpha {Mou	8e-32
d1duxc_	86	a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId:	5e-31
d1hbxg_	155	a.4.5.21 (G:) Serum response factor accessory prot	1e-30
d1hbxg_	155	a.4.5.21 (G:) Serum response factor accessory prot	0.003
d1puee_	88	a.4.5.21 (E:) Transcription factor PU.1, residues	2e-29
d1yo5c1	88	a.4.5.21 (C:247-334) Sam pointed domain containing	9e-29
d1wwxa1	94	a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human	2e-28

>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Fli-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 1e-36
 Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 2/75 (2%)

Query: 62  GSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLS 121
           GSGQIQLWQFLLELLSDS NA+CITWEGTNGEFK+TDPDEVARRWGERKSKPNMNYDKLS
Sbjct: 2   GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLS 61

Query: 122 RALRTHSRR--LRKI 134
           RALR +  +  + K+
Sbjct: 62  RALRYYYDKNIMTKV 76

>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Fli-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 20/24 (83%), Positives = 21/24 (87%)

Query: 1  MTKVHGKRYAYKFDFQGLAAATQP 24
          MTKVHGKRYAYKFDF G+A A QP
Sbjct: 73 MTKVHGKRYAYKFDFHGIAQALQP 96

>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440 {Human (Homo sapiens) [TaxId: 9606]} Length = 142

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: ETS-1 transcription factor, residues 331-440
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 4e-35
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 5/97 (5%)

Query: 54  AAGIQSSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKP 113
           AA +   TGSG IQLWQFLLELL+D +  + I+W G   EFKL+DPDEVARRWG+RK+KP
Sbjct: 28  AAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKP 87

Query: 114 NMNYDKLSRALRTHSRRLRKIFIPGLGNIDKEIVYFF 150
            MNY+KLSR LR +    + I     G   K  VY F
Sbjct: 88  KMNYEKLSRGLRYYYD--KNIIHKTAG---KRYVYRF 119

>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 110

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: GA binding protein (GABP) alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  107 bits (269), Expect = 8e-32
 Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 2/71 (2%)

Query: 66  IQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALR 125
           IQLWQFLLELL+D    +CI+W G  GEFKL  P+ VA++WG+RK+KP MNY+KLSRALR
Sbjct: 1   IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALR 60

Query: 126 THSRR--LRKI 134
            +     + K+
Sbjct: 61  YYYDGDMICKV 71

>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 86

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Elk-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (262), Expect = 5e-31
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 3/72 (4%)

Query: 66  IQLWQFLLELLSDSTNANCITWEGT-NGEFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 124
           + LWQFLL+LL +  N + I+W     GEFKL D +EVAR WG RK+K NMNYDKLSRAL
Sbjct: 1   VTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRAL 60

Query: 125 RTHSRR--LRKI 134
           R +  +  +RK+
Sbjct: 61  RYYYDKNIIRKV 72

>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 155

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Serum response factor accessory protein 1a, SAP-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 1e-30
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%)

Query: 65  QIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 124
            I LWQFLL+LL    N + I W   +G+FKL   +EVAR WG RK+KPNMNYDKLSRAL
Sbjct: 3   AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRAL 62

Query: 125 RTHSRR--LRKI 134
           R +  +  ++K+
Sbjct: 63  RYYYVKNIIKKV 74

>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 155

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Serum response factor accessory protein 1a, SAP-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 11/63 (17%), Positives = 17/63 (26%)

Query: 1   MTKVHGKRYAYKFDFQGLAAATQPAAADPAYKYQSDLFMSSYHHSTKLNFMSSAAGIQSS 60
           + KV+G+++ YKF          P            L  S    S+K             
Sbjct: 71  IKKVNGQKFVYKFVSYPEILNMDPMTVGRIEGDCESLNFSEVSSSSKDVENGGKDKPPQP 130

Query: 61  TGS 63
              
Sbjct: 131 GAK 133

>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Transcription factor PU.1, residues 171-259
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  100 bits (251), Expect = 2e-29
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 65  QIQLWQFLLELLSDSTNANCITWEGTNG---EFKLTDPDEVARRWGERK-SKPNMNYDKL 120
           +I+L+QFLL+LL      + I W   +    +F     + +A RWG +K ++  M Y+K+
Sbjct: 1   KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKM 60

Query: 121 SRALRTHSRR--LRKIFIPGLGNIDKEIVYFF 150
           +RALR + +   ++K        + K++ Y F
Sbjct: 61  ARALRNYGKTGEVKK--------VKKKLTYQF 84

>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Sam pointed domain containing ets transcription SPDEF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (247), Expect = 9e-29
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 4/73 (5%)

Query: 66  IQLWQFLLELLSD-STNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRA 123
           I LWQFL ELL    +    I W     G FK+ D  +VAR WG RK++P MNYDKLSR+
Sbjct: 3   IHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRS 62

Query: 124 LRTHSRR--LRKI 134
           +R + ++  +RK 
Sbjct: 63  IRQYYKKGIIRKP 75

>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: E74-like factor 5 ese-2b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (245), Expect = 2e-28
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 12/88 (13%)

Query: 67  QLWQFLLELLSD-STNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 124
            LW+F+ +LL     N   + WE    G F++   + +A+ WG+RK    M Y+KLSRAL
Sbjct: 3   HLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRAL 62

Query: 125 RTHSRR--LRKIFIPGLGNIDKEIVYFF 150
           R + +   L +        +D+ +VY F
Sbjct: 63  RYYYKTGILER--------VDRRLVYKF 82

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	151
d1flia_	98	Fli-1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1duxc_	86	Elk-1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1gvja_	142	ETS-1 transcription factor, residues 331-440 {Huma	100.0
d1awca_	110	GA binding protein (GABP) alpha {Mouse (Mus muscul	100.0
d1yo5c1	88	Sam pointed domain containing ets transcription SP	100.0
d1puee_	88	Transcription factor PU.1, residues 171-259 {Mouse	100.0
d1wwxa1	94	E74-like factor 5 ese-2b {Human (Homo sapiens) [Ta	100.0
d1hbxg_	155	Serum response factor accessory protein 1a, SAP-1	100.0
d2htsa_	92	Heat-shock transcription factor {Milk yeast (Kluyv	96.93
d1hksa_	106	Heat-shock transcription factor {Drosophila melano	96.72
d1hbxg_	155	Serum response factor accessory protein 1a, SAP-1	94.39
d1awca_	110	GA binding protein (GABP) alpha {Mouse (Mus muscul	85.14
d2irfg_	109	Interferon regulatory factor-2, IRF-2 {Mouse (Mus	83.71

>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Fli-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-41  Score=241.79  Aligned_cols=86  Identities=76%  Similarity=1.172  Sum_probs=79.2

Q ss_pred             CCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCC
Q psy15186         61 TGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLG  140 (151)
Q Consensus        61 ~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~  140 (151)
                      +|+|+++||+||++||.|+++.+||+|++++|||+|+||++||+|||.+||+++||||||||||||||++++...|+|  
T Consensus         1 pg~g~~~Lw~FL~~LL~d~~~~~~I~W~~~~geFkl~~~~~VA~lWG~~Knk~~M~YeklSRaLRyYY~~~il~Kv~g--   78 (98)
T d1flia_           1 PGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHG--   78 (98)
T ss_dssp             CCCSSCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHHHTTSCCCBGG--
T ss_pred             CCCCcccHHHHHHHHhcCcccCCceEEECCCCEEEeCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHhccceeeccC--
Confidence            488999999999999999999999999998999999999999999999999999999999999999999975543332  


Q ss_pred             CcccceeeecC
Q psy15186        141 NIDKEIVYFFR  151 (151)
Q Consensus       141 ~i~~~l~y~f~  151 (151)
                         ||++|+|.
T Consensus        79 ---krl~Y~F~   86 (98)
T d1flia_          79 ---KRYAYKFD   86 (98)
T ss_dssp             ---GSSBCCCC
T ss_pred             ---ceEEEecC
Confidence               89999993

>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Elk-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-40  Score=230.84  Aligned_cols=80  Identities=53%  Similarity=0.877  Sum_probs=75.0

Q ss_pred             chHHHHHHHhcCCCCCCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCccc
Q psy15186         66 IQLWQFLLELLSDSTNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDK  144 (151)
Q Consensus        66 ~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~~  144 (151)
                      ++|||||++||+|+++++||+||| ++|||+|+||++||+|||.+||+|+||||||||||||||++++...|||     |
T Consensus         1 i~LwqFL~~LL~d~~~~~~I~Wt~k~~g~Fklv~~~~VA~lWG~~Knk~~MnYeklSRaLRyyY~~~il~Kv~g-----~   75 (86)
T d1duxc_           1 VTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLSRALRYYYDKNIIRKVSG-----Q   75 (86)
T ss_dssp             CCHHHHHHHHHHHCSSSSSCEEEETTTTEEECTTHHHHHHHHHHTTTCSCCCHHHHHHHHHHHHTTTSEEECTT-----S
T ss_pred             CcHHHHHHHHhcCCCCCCceEeccCCCCEEEecCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcccEeeccC-----c
Confidence            589999999999999999999999 6899999999999999999999999999999999999999986655554     8


Q ss_pred             ceeeec
Q psy15186        145 EIVYFF  150 (151)
Q Consensus       145 ~l~y~f  150 (151)
                      |++|+|
T Consensus        76 rl~Y~F   81 (86)
T d1duxc_          76 KFVYKF   81 (86)
T ss_dssp             TTEEEE
T ss_pred             EEEEEe
Confidence            999999

>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: ETS-1 transcription factor, residues 331-440
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-39  Score=241.75  Aligned_cols=87  Identities=59%  Similarity=0.941  Sum_probs=80.2

Q ss_pred             cCCCCCcchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCC
Q psy15186         59 SSTGSGQIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPG  138 (151)
Q Consensus        59 s~~g~G~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~  138 (151)
                      ...|+|+++||+||++||.|+++.+||+|||+++||+|+||++||+|||.+||+++||||||||||||||++++...|+|
T Consensus        33 ~~~~~g~i~LWqFLleLL~d~~~~~~I~Wt~~~~eFkl~d~e~VA~lWG~~Knk~~MnYeKmSRALRyYY~k~il~Kv~g  112 (142)
T d1gvja_          33 GYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAG  112 (142)
T ss_dssp             HHHTCCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTT
T ss_pred             CCCCCCeeeHHHHHHHHHcCCccCCccEEECCCCeEEeCCHHHHHHHHHhhcCCCCccHHHHhHHHHHHhhcceEEecCC
Confidence            34678999999999999999999999999998899999999999999999999999999999999999999975544443


Q ss_pred             CCCcccceeeec
Q psy15186        139 LGNIDKEIVYFF  150 (151)
Q Consensus       139 ~~~i~~~l~y~f  150 (151)
                           |||||+|
T Consensus       113 -----~rl~YkF  119 (142)
T d1gvja_         113 -----KRYVYRF  119 (142)
T ss_dssp             -----SSSEEEE
T ss_pred             -----cEEEEec
Confidence                 8999999

>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: GA binding protein (GABP) alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-39  Score=232.76  Aligned_cols=80  Identities=56%  Similarity=0.990  Sum_probs=74.9

Q ss_pred             chHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCcccc
Q psy15186         66 IQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDKE  145 (151)
Q Consensus        66 ~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~~~  145 (151)
                      ++||+||++||.|+++.+||+|||++|||+|+||++||+|||.+||+++||||||||||||||++++...|||     ||
T Consensus         1 i~Lw~FL~~LL~d~~~~~~I~Wt~~~geFkl~d~e~VA~lWG~~Knk~~M~YeklSRaLRyYY~~~il~Kv~g-----~r   75 (110)
T d1awca_           1 IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQG-----KR   75 (110)
T ss_dssp             CCHHHHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGGSSSEEECTT-----ST
T ss_pred             CcHHHHHHHHHcCcccCCCcEEECCCCEEEeCCHHHHHHHHHHhhCCCcccHHHHHHHHHHHHhcccEEecCC-----cE
Confidence            5899999999999999999999998899999999999999999999999999999999999999976554544     79


Q ss_pred             eeeec
Q psy15186        146 IVYFF  150 (151)
Q Consensus       146 l~y~f  150 (151)
                      +||+|
T Consensus        76 l~Y~F   80 (110)
T d1awca_          76 FVYKF   80 (110)
T ss_dssp             TEEEE
T ss_pred             EEEec
Confidence            99999

>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Sam pointed domain containing ets transcription SPDEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-39  Score=225.41  Aligned_cols=82  Identities=44%  Similarity=0.738  Sum_probs=73.1

Q ss_pred             cchHHHHHHHhcCCC-CCCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCc
Q psy15186         65 QIQLWQFLLELLSDS-TNANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNI  142 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~-~~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i  142 (151)
                      .++|||||++||.|+ +++++|+||| ..|||+|+||++||+|||.+||+++||||||||||||||++++...|+    +
T Consensus         2 pi~Lw~FL~~LL~d~~~~~~~I~Wt~~~~g~Fkl~~~~~VA~lWG~~Knk~~M~YeklSRALRyYY~~~il~Kv~----~   77 (88)
T d1yo5c1           2 PIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKKGIIRKPD----I   77 (88)
T ss_dssp             CCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTTTSEECCS----S
T ss_pred             cchHHHHHHHHHcCccccCCCeEEECCCCceEEecCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccceeecc----C
Confidence            478999999999997 5799999998 679999999999999999999999999999999999999997543333    1


Q ss_pred             ccceeeec
Q psy15186        143 DKEIVYFF  150 (151)
Q Consensus       143 ~~~l~y~f  150 (151)
                      .|||||+|
T Consensus        78 g~rl~Y~F   85 (88)
T d1yo5c1          78 SQRLVYQF   85 (88)
T ss_dssp             CCTTEEEE
T ss_pred             CcEeEEeC
Confidence            28999999

>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Transcription factor PU.1, residues 171-259
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.5e-38  Score=221.94  Aligned_cols=81  Identities=33%  Similarity=0.704  Sum_probs=72.9

Q ss_pred             cchHHHHHHHhcCCCCCCCcccccC-CCceEEecC--hHHHHHHhhccc-CCCCCcHHHHHHHHHHHHHhhhhhccCCCC
Q psy15186         65 QIQLWQFLLELLSDSTNANCITWEG-TNGEFKLTD--PDEVARRWGERK-SKPNMNYDKLSRALRTHSRRLRKIFIPGLG  140 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~d--~~~vArlWG~~k-~~~~m~YdklsRaLR~yy~k~~~~~~p~~~  140 (151)
                      +++||+||++||.||++.++|+||| .+|+|+|++  |++||+|||.+| |+|+||||||||||||||++++.      .
T Consensus         1 qi~LwqFL~~LL~d~~~~~~I~Wt~~~~g~F~fv~~~~e~VA~lWG~~K~Nr~~MnYeklSRaLRyYY~~~il------~   74 (88)
T d1puee_           1 KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEV------K   74 (88)
T ss_dssp             CCCHHHHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHSSE------E
T ss_pred             CccHHHHHHHHHcCccCCCceEeeCCCCceEEEEeCCHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhccce------e
Confidence            5799999999999999999999999 579999986  899999999999 68999999999999999999754      3


Q ss_pred             CcccceeeecC
Q psy15186        141 NIDKEIVYFFR  151 (151)
Q Consensus       141 ~i~~~l~y~f~  151 (151)
                      ++.+||||+|-
T Consensus        75 Kv~~rl~YkF~   85 (88)
T d1puee_          75 KVKKKLTYQFS   85 (88)
T ss_dssp             ECSSTTEEEEC
T ss_pred             eccceEEEecC
Confidence            44469999993

>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: E74-like factor 5 ese-2b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-38  Score=222.82  Aligned_cols=79  Identities=35%  Similarity=0.723  Sum_probs=71.8

Q ss_pred             chHHHHHHHhcCCCC-CCCcccccC-CCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCcc
Q psy15186         66 IQLWQFLLELLSDST-NANCITWEG-TNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNID  143 (151)
Q Consensus        66 ~~Lw~FLl~LL~d~~-~~~~I~W~~-~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~  143 (151)
                      .+|||||++||.||+ ++++|+||| ..|||+|+||++||+|||.+||+++||||||||||||||++++.      +++.
T Consensus         2 ~~LwqFL~~LL~d~~~~~~~I~Wt~k~~g~Fkl~d~~~VA~lWG~~K~~~~M~YeklSRaLRyYY~~~il------~Kv~   75 (94)
T d1wwxa1           2 SHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGIL------ERVD   75 (94)
T ss_dssp             CCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSE------ECCS
T ss_pred             ChHHHHHHHHHcCCccCCCeEEEEcCCCcEEEEcCHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHhccce------eecC
Confidence            589999999999974 689999999 67999999999999999999999999999999999999999744      3344


Q ss_pred             cceeeec
Q psy15186        144 KEIVYFF  150 (151)
Q Consensus       144 ~~l~y~f  150 (151)
                      +||||+|
T Consensus        76 ~rl~Y~F   82 (94)
T d1wwxa1          76 RRLVYKF   82 (94)
T ss_dssp             SSSEEEE
T ss_pred             cEEEEEe
Confidence            7999999

>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Serum response factor accessory protein 1a, SAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-38  Score=241.29  Aligned_cols=81  Identities=52%  Similarity=0.857  Sum_probs=75.7

Q ss_pred             cchHHHHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHhhhhhccCCCCCccc
Q psy15186         65 QIQLWQFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRRLRKIFIPGLGNIDK  144 (151)
Q Consensus        65 ~~~Lw~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k~~~~~~p~~~~i~~  144 (151)
                      .++|||||++||.|+++.+||+|||++|||+|+||++||+|||.+||+++||||||||||||||+++|...|+|     |
T Consensus         3 ~i~Lw~FL~~LL~d~~~~~~I~Wt~~~geFkl~~~~~VA~lWG~rKnk~~M~YeklSRaLRyYY~k~il~Kv~g-----~   77 (155)
T d1hbxg_           3 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNG-----Q   77 (155)
T ss_dssp             CCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSS-----C
T ss_pred             eeeHHHHHHHHHcCccCCCceEEECCCCEEEeCCHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCCEeeccC-----c
Confidence            58999999999999999999999998899999999999999999999999999999999999999976544443     8


Q ss_pred             ceeeec
Q psy15186        145 EIVYFF  150 (151)
Q Consensus       145 ~l~y~f  150 (151)
                      |+||+|
T Consensus        78 r~~YkF   83 (155)
T d1hbxg_          78 KFVYKF   83 (155)
T ss_dssp             TTEEEE
T ss_pred             eeEEEe
Confidence            999999

>d2htsa_ a.4.5.22 (A:) Heat-shock transcription factor {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Heat-shock transcription factor
domain: Heat-shock transcription factor
species: Milk yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=96.93  E-value=0.00036  Score=47.21  Aligned_cols=60  Identities=13%  Similarity=0.261  Sum_probs=47.0

Q ss_pred             HHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         70 QFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        70 ~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      .=|.+||+|+++.++|+|...+..|.|.|++++++.--.+- -..-+|.++.|-|..|.=+
T Consensus         7 ~kL~~~l~~~~~~~iI~W~~~G~~f~I~d~~~f~~~vLp~~-F~~~~~~SF~RQLn~yGF~   66 (92)
T d2htsa_           7 NKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKY-FKHSNFASFVRQLNMYGWH   66 (92)
T ss_dssp             HHHHHHHHCGGGTTTCEECTTSSSEEESCHHHHHHHTHHHH-CTTCCHHHHHHHHHHTTEE
T ss_pred             HHHHHHHcCcCCCCEEEEeCCCCEEEEeCHHHHHHHHHHHh-cCCCCHHHHHHHHHhCCeE
Confidence            34667889999999999998888899999998876544321 2346799999999888654

>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila melanogaster [TaxId: 7227]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Heat-shock transcription factor
domain: Heat-shock transcription factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.72  E-value=0.00065  Score=46.61  Aligned_cols=60  Identities=17%  Similarity=0.231  Sum_probs=46.1

Q ss_pred             HHHHHhcCCCCCCCcccccCCCceEEecChHHHHHHhhcccCCCCCcHHHHHHHHHHHHHh
Q psy15186         70 QFLLELLSDSTNANCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRTHSRR  130 (151)
Q Consensus        70 ~FLl~LL~d~~~~~~I~W~~~~~~Fk~~d~~~vArlWG~~k~~~~m~YdklsRaLR~yy~k  130 (151)
                      .=|.+||+|++..++|+|...+..|.|.|++++++.-=.+ --...+|.++-|-|-.|.=+
T Consensus         9 ~KL~~ml~~~~~~~iI~W~~~G~~fiI~d~~~f~~~vLp~-~Fk~~~~~SF~RQLn~yGF~   68 (106)
T d1hksa_           9 AKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPL-NYKHNNMASFIRQLNMYGFH   68 (106)
T ss_dssp             HHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTT-TTSCCCHHHHHHHHHHHCCC
T ss_pred             HHHHHHHhCcCCCCEEEEcCCCCEEEEcCHHHHHHHHhhh-hccccCHHHHHHHHHHCCCE
Confidence            3456788999999999999999999999987766443221 22356799999999888654

>d1hbxg_ a.4.5.21 (G:) Serum response factor accessory protein 1a, SAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: Serum response factor accessory protein 1a, SAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.0045  Score=45.52  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=17.8

Q ss_pred             CcccCCeeeeeeecccchhhhhCCCC
Q psy15186          1 MTKVHGKRYAYKFDFQGLAAATQPAA   26 (151)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~p~~   26 (151)
                      |.||+|+||.|+|.....+-.+.|.+
T Consensus        71 l~Kv~g~r~~YkF~~~p~~l~~~~~~   96 (155)
T d1hbxg_          71 IKKVNGQKFVYKFVSYPEILNMDPMT   96 (155)
T ss_dssp             EEECSSCTTEEEESSTTGGGCC----
T ss_pred             EeeccCceeEEEecCCHHHhccCccc
Confidence            57999999999998766655444433

>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ets domain
domain: GA binding protein (GABP) alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.14  E-value=0.086  Score=36.36  Aligned_cols=14  Identities=57%  Similarity=1.061  Sum_probs=12.6

Q ss_pred             CcccCCeeeeeeec
Q psy15186          1 MTKVHGKRYAYKFD   14 (151)
Q Consensus         1 ~~~~~~~~~~~~~~   14 (151)
                      |.||+|+|+.|+|.
T Consensus        68 l~Kv~g~rl~Y~F~   81 (110)
T d1awca_          68 ICKVQGKRFVYKFV   81 (110)
T ss_dssp             EEECTTSTTEEEEC
T ss_pred             EEecCCcEEEEecc
Confidence            57999999999994

>d2irfg_ a.4.5.23 (G:) Interferon regulatory factor-2, IRF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Interferon regulatory factor
domain: Interferon regulatory factor-2, IRF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.71  E-value=1.4  Score=29.80  Aligned_cols=64  Identities=16%  Similarity=0.346  Sum_probs=50.8

Q ss_pred             chHHHHHHHhcCCCCCCCcccccC-CCceEEec---------ChH---HHHHHhhcccCC-----CCCcHHHHHHHHHHH
Q psy15186         66 IQLWQFLLELLSDSTNANCITWEG-TNGEFKLT---------DPD---EVARRWGERKSK-----PNMNYDKLSRALRTH  127 (151)
Q Consensus        66 ~~Lw~FLl~LL~d~~~~~~I~W~~-~~~~Fk~~---------d~~---~vArlWG~~k~~-----~~m~YdklsRaLR~y  127 (151)
                      ++|-.+|++-++...+++ +.|.| +++.|+|-         +.|   .+=+.|..++|+     ..-++.+....||.-
T Consensus         2 ~rlr~WL~~qi~sg~ypG-L~W~D~~k~~FrIPWkH~~r~~~~~e~d~~iFkaWA~~tGk~~~g~d~~dp~~WKtnfRcA   80 (109)
T d2irfg_           2 MRMRPWLEEQINSNTIPG-LKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQPGIDKPDPKTWKANFRCA   80 (109)
T ss_dssp             CCHHHHHHHHHHTTCSTT-CEEEETTTTEEEEECCCTTSTTCCHHHHSHHHHHHHHHTTSCCTTTSCCCHHHHHHHHHHH
T ss_pred             CchHHHHHHHhccCCCCC-CEEecCCCCEEEeecccCCCCCCCccchhHHHHHHHHHcCCcCCCCCCCChhHHHHHHHHH
Confidence            568899999999999988 79998 67999983         223   477999999885     334688877778877


Q ss_pred             HHh
Q psy15186        128 SRR  130 (151)
Q Consensus       128 y~k  130 (151)
                      -.+
T Consensus        81 Lnk   83 (109)
T d2irfg_          81 MNS   83 (109)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            777