Psyllid ID: psy15191

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MKSEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW
Secondary Structure (PSIPRED)
cccccEEEEEcccccEEEEEEcccccEEEEEEEccccEEEEEEccccccEEEEEccccEEEcccccEEEEEEccccEEEEEcccccEEEccccccccccEEEEEEcccccEEEEEccccEEEEcccccEEEcccccccEEEEEEcccccEEEEEEcccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEccccccccccccccEEEEEEcccccEEEEEEccccEEEcccccccccccccccccccEEEEEccccccEEEEEEcccccEEEEEEccccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEcccccEEEEEcccccEEEEEEEEcccccEEEEEEcccccEEEEEEEEEEEEcccccEEEEEccccEEEEEEcccccccEEEEEEcccccEEEEEEcccccEEEEccccEEEEEEccccEEEEccccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEccccccccEEEEEccccccEEEEEEcccccEEEEEcccccccccEEEEc
Coil and Loop (DISEMBL)
mksepgdvvngeggKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLntsldpehkdlvscsldKTAILWKYVsegnylpyhmrddskqlHLLSCSMdksiivwapdpttglwletarvgevggntlgfygckfgprgdyiiahgfqgslhldVTTWkqiqtlpchqltitqlafspddthlvsvsrdrrwglykrqssgrlslvacsdktngvHKRIIWGVAWSHDSRYFLTISRDGVCVvwglgeppteedlvqntlwpEVQKLYGHGYEIYSLAASHDGTLLASAckatkpehaaiiiw
Flexible Loop (DISEMBL)
mksepgdvvngegGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITqlafspddthlvsvsrdrrwglykrqssgrlslvacsdktngvHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEppteedlvqnTLWPEVQKLYGHGYEIYSLAASHDGTLLASACkatkpehaaiiiw
Low Complexity Region (SEG)
MKSEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW
Disordered region (IsUnstruct)
************GGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII*
Disordered Region (DISOPRED)
*KSEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW
Disordered Region (DISEMBL)
********VNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW
Disordered Region (DISPRO)
*KSEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q7K4B3	794	Probable elongator comple	yes	N/A	0.320	0.125	0.603	5e-27
Q05AM5	821	Elongator complex protein	yes	N/A	0.625	0.237	0.296	7e-23
Q5EBD9	824	Elongator complex protein	yes	N/A	0.625	0.236	0.323	2e-22
Q496Z0	821	Elongator complex protein	yes	N/A	0.288	0.109	0.541	7e-22
O94533	760	Elongator complex protein	yes	N/A	0.676	0.277	0.274	2e-21
Q6IA86	826	Elongator complex protein	no	N/A	0.342	0.129	0.452	3e-21
Q91WG4	831	Elongator complex protein	yes	N/A	0.522	0.196	0.334	5e-21
Q86H45	901	Probable elongator comple	yes	N/A	0.342	0.118	0.385	8e-18
F4I1S7	838	Elongator complex protein	yes	N/A	0.333	0.124	0.357	2e-12
Q55563	1693	Uncharacterized WD repeat	N/A	N/A	0.746	0.137	0.279	3e-10

>sp|Q7K4B3|ELP2_DROME Probable elongator complex protein 2 OS=Drosophila melanogaster GN=Elp2 PE=1 SV=1

 Score =  122 bits (305), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 72/101 (71%), Gaps = 1/101 (0%)

Query: 165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNG 223
           + WKQIQ L  HQLT+TQL+FSPD  +L+SVSRDRRW LY+RQ SS    LVA +DK+NG
Sbjct: 594 SNWKQIQKLSGHQLTVTQLSFSPDSRYLLSVSRDRRWCLYERQDSSVSYQLVASTDKSNG 653

Query: 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
           VH RIIW   WSHD ++F+T SRDG  VVW   E   E  L
Sbjct: 654 VHTRIIWSCDWSHDGQFFVTSSRDGKVVVWKKEEDCKESSL 694

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (By similarity). Involved in the regulation of the STAT pathway.
Drosophila melanogaster (taxid: 7227)

>sp|Q05AM5|ELP2_DANRE Elongator complex protein 2 OS=Danio rerio GN=elp2 PE=2 SV=1

 Score =  108 bits (269), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 24/219 (10%)

Query: 9   VNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPE---- 64
           ++G+  +VL TLT H+  V  V+W  + G++     +    +   +    T+ +P+    
Sbjct: 186 LSGQFQRVL-TLTGHEDWVRGVEWANKDGELWLASCSQDCLIRVWRLFAKTAAEPDLQTD 244

Query: 65  -----HKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDS--KQLHLLSCSMDK 109
                 +++   S ++ A+  + V  G+        + P  ++ DS  + L LLS SMDK
Sbjct: 245 GIIKMKENIFQVSGEEFAVTLETVLAGHENWVYGIHWQPPSVKGDSVEQSLKLLSASMDK 304

Query: 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL----DVT 165
           ++I+W P+  +G+W+E  RVGEVGGNTLGFYGC+  P G  I+AH F G+LHL       
Sbjct: 305 TMILWGPEEDSGMWVEMVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGALHLWHHDSNQ 364

Query: 166 TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLY 204
            W+    +  H   +  +++ P+   +++V  D+   L+
Sbjct: 365 EWRPSVVISGHFNAVQDMSWDPEGEFIITVGSDQTTRLF 403

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.

Danio rerio (taxid: 7955)

>sp|Q5EBD9|ELP2_XENTR Elongator complex protein 2 OS=Xenopus tropicalis GN=elp2 PE=2 SV=1

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 18/213 (8%)

Query: 84  SEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK 143
           S+ N+ P ++ +   + HLL  ++   +         G   E   V      T+    CK
Sbjct: 530 SQPNFQPLNLTEPPTEDHLLQNTLWPEV-----QKLYGHGYEIFAVACNSAKTVIASACK 584

Query: 144 FGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGL 203
              R    I       +    T+WKQ+Q+L  H LT+TQ+AFSPDD  L+ VSRDR W L
Sbjct: 585 ASKREHAAI-------ILWSTTSWKQLQSLSYHNLTVTQMAFSPDDEFLLVVSRDRNWSL 637

Query: 204 YKR------QSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE 257
           +K+      Q+    +L A +DK + VH RIIW   W+ DS+YF+T SRD   +VWG   
Sbjct: 638 WKKQEGIPEQTEPTFTLYASTDKNSCVHSRIIWACDWTPDSKYFVTGSRDKKVIVWGDCS 697

Query: 258 PPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH 290
            P+  +   + L      L   G  I +++ S 
Sbjct: 698 LPSMNEEKSSALIRPCSSLLDTGDSITAVSVSQ 730

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.

Xenopus tropicalis (taxid: 8364)

>sp|Q496Z0|ELP2_RAT Elongator complex protein 2 OS=Rattus norvegicus GN=Elp2 PE=2 SV=1

 Score =  104 bits (260), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 6/96 (6%)

Query: 165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR------LSLVACS 218
           T+WKQ+Q+L  H LT+TQ+AFSPDD  L++VSRDR W L+KRQ           SL A +
Sbjct: 600 TSWKQVQSLAYHTLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDVTSAEFDPFFSLFAFT 659

Query: 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254
           +K   VH RIIW   WS DS+YF T SRD   VVWG
Sbjct: 660 NKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWG 695

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling and is involved in acetylation of histones H3 and probably H4.

Rattus norvegicus (taxid: 10116)

>sp|O94533|ELP2_SCHPO Elongator complex protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=elp2 PE=3 SV=1

 Score =  103 bits (257), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 70/281 (24%)

Query: 102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVG---------GNTLGFYGCKFGPRGDYII 152
           +LS S D S+IVW PD  TG+W+ T R+GE+          G+  GF+G  + P G+ ++
Sbjct: 283 ILSSSADSSMIVWEPDTNTGIWVVTGRMGEMASSHGSTTATGSAGGFWGGLWNPNGNCVV 342

Query: 153 AHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKR 206
             G  G   L   D   W Q+ ++  H  ++  +A+ P+    +S   D   R +  +K+
Sbjct: 343 CWGRTGGWRLWKQDAGQWLQLPSISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLFARFKK 402

Query: 207 QSS---------------------GRLSLVACSD-KTNGVHK------RIIWGVAWSHDS 238
            ++                      R+  ++C+D K + V K      R+++ +  ++  
Sbjct: 403 DNAWHEMARPQIHGYDLTSISCMPSRIGFLSCADEKVSRVFKFPKTIVRLLYRLCDTNIG 462

Query: 239 RYFL----------------TISRDGVC-----------VVWGLGEPPTEEDLVQNTLWP 271
              L                T S  G             V+  L  PP EE L +  L+P
Sbjct: 463 EESLPDAANVPLLGLSNKATTASETGTVNAEEVQTPVADVIGSLNHPPFEEHLQRLLLFP 522

Query: 272 EVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312
           EV+KL+GHGYE+Y+ A S++G + A++CK+  PEHA I ++
Sbjct: 523 EVEKLFGHGYEVYACAISNNGNIAATSCKSQTPEHAVIRLY 563

Acts as component of the RNA polymerase II elongator complex, which is a major histone acetyltransferase component of the RNA polymerase II (RNAPII) holoenzyme and is involved in transcriptional elongation. Association with elongating RNAPII requires a hyperphosphorylated state of the RNAPII C-terminal domain (CTD). Elongator binds to both naked and nucleosomal DNA, can acetylate both core and nucleosomal histones, and is involved in chromatin remodeling. It acetylates histones H3, preferentially at 'Lys-14', and H4, preferentially at 'Lys-8'. Independently, elp2 may be involved in polarized exocytosis. Is required for an early step in synthesis of 5-methoxycarbonylmethyl (mcm5) and 5-carbamoylmethyl (ncm5) groups present on uridines at the wobble position in tRNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q6IA86|ELP2_HUMAN Elongator complex protein 2 OS=Homo sapiens GN=ELP2 PE=1 SV=2

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 8/115 (6%)

Query: 163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS------GRLSLVA 216
           + T+WKQ+Q L  H LT+TQ+AFSP++  L++VSRDR W L+K+Q +         SL A
Sbjct: 600 NTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFA 659

Query: 217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271
            ++K   VH RIIW   WS DS+YF T SRD   VVW  GE  + +D +++ + P
Sbjct: 660 FTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVW--GECDSTDDCIEHNIGP 712

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling and is involved in acetylation of histones H3 and probably H4.

Homo sapiens (taxid: 9606)

>sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=Mus musculus GN=Elp2 PE=1 SV=1

 Score =  102 bits (253), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 97/209 (46%), Gaps = 46/209 (22%)

Query: 81  KYVSEGNYLPYHMRDDSKQ--LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG 138
            +V+  ++ P   +D   Q  + LLS SMDK++I+WAPD  +G+WLE  RVGEVGGNTLG
Sbjct: 283 NWVNAVHWQPSFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLG 342

Query: 139 FYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD 198
           FY C+FG  G  IIAH F G+LHL    WKQ    P                        
Sbjct: 343 FYDCQFGENGTMIIAHAFHGALHL----WKQSTVNP------------------------ 374

Query: 199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258
           R+W             +  S   +GV       + W  +  + +T S D    ++   + 
Sbjct: 375 RQWA----------PEIVISGHFDGVQD-----LMWDPEGEFIITTSTDQTTRLFAPWKK 419

Query: 259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLA 287
             ++D  Q T W E+ +   HGY I  LA
Sbjct: 420 KDQKDRSQVT-WHEIARPQIHGYNIKCLA 447

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling and is involved in acetylation of histones H3 and probably H4.

Mus musculus (taxid: 10090)

>sp|Q86H45|ELP2_DICDI Probable elongator complex protein 2 OS=Dictyostelium discoideum GN=elp2 PE=3 SV=1

 Score = 91.3 bits (225), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 7/114 (6%)

Query: 98  KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ 157
           ++  L+S SMDK+ IVW PD TTG+W++ +RVG++GGN LG YG  F P   YI++HG+ 
Sbjct: 351 QEQMLISASMDKTAIVWRPDRTTGIWIDESRVGDMGGNILGQYGAVFSPCSQYILSHGYN 410

Query: 158 GSLHL-------DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLY 204
           G+ H          + W+    +  H   +  L +SPD ++ +S S DR   L+
Sbjct: 411 GAFHFWKQNTNQKSSFWEPQIVVSGHFGPVQDLMWSPDYSYFISCSTDRTLRLF 464

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.

Dictyostelium discoideum (taxid: 44689)

>sp|F4I1S7|ELP2_ARATH Elongator complex protein 2 OS=Arabidopsis thaliana GN=ELP2 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 8/112 (7%)

Query: 96  DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG 155
           + + L +LS SMDK++++W P+  TG+W+    VGE+    LGFYG  + P    I+AHG
Sbjct: 324 NHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPNSLSILAHG 383

Query: 156 FQGSLHL--DVTTWK-----QIQTLPC-HQLTITQLAFSPDDTHLVSVSRDR 199
           + G+ HL  +V++ K     Q+Q +P  H   +T + ++    +L+SVS+D+
Sbjct: 384 YGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQ 435

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (By similarity). Promotes organs development by modulating cell division rate. Prevents abscisic acid (ABA) signaling leading to stomatal closure and seedling growth inhibition. Involved in oxidative stress signaling. Prevents anthocyanins accumulation. Accelerator of defense gene induction required for rapid defense gene induction, and for the establishment of both basal and effector-triggered immunity (ETI), in a NPR1-independent manner, but is not required for systemic acquired resistance (SAR) establishment.

Arabidopsis thaliana (taxid: 3702)

>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1

 Score = 66.2 bits (160), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 108/272 (39%), Gaps = 39/272 (14%)

Query: 37   GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD 96
            GK L  L  H+  V      LN    P+ + +V+ S D TA +W   + G  L   +R  
Sbjct: 1414 GKKLTVLRGHQDAV------LNVRFSPDSQYIVTASKDGTARVWN--NTGRELAV-LRHY 1464

Query: 97   SKQLHLLSCSMDKSIIVWAPDPTT-GLWLETAR-VGEVGGNTLGFYGCKFGPRGDYIIAH 154
             K +     S D   IV A D  T G+W    R VG   G+    Y  +F     YI+  
Sbjct: 1465 EKNIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFSADSRYILTA 1524

Query: 155  GFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL 214
                +  +     + + TL  HQ  + Q  FSP+   + +VS D    L+ R        
Sbjct: 1525 SVDNTARIWDFLGRPLLTLAGHQSIVYQARFSPEGNLIATVSADHTARLWDR-------- 1576

Query: 215  VACSDKTNGV---HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271
               S KT  V   H+ ++  V WS D +  +T S DG   +W L                
Sbjct: 1577 ---SGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSG-------------R 1620

Query: 272  EVQKLYGHGYEIYSLAASHDGT-LLASACKAT 302
            E+  L GHG  + S   S DG  +L S+   T
Sbjct: 1621 ELLTLEGHGNWVRSAEFSPDGRWVLTSSADGT 1652

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
270013922	748	hypothetical protein TcasGA2_TC012601 [T	0.689	0.287	0.389	2e-36
91090664	762	PREDICTED: similar to GA11261-PA [Tribol	0.689	0.282	0.389	2e-36
383862461	776	PREDICTED: probable elongator complex pr	0.711	0.286	0.357	5e-36
328766918	830	hypothetical protein BATDEDRAFT_36146 [B	0.689	0.259	0.363	1e-34
440791514	840	WD domain, G-beta repeat-containing prot	0.689	0.255	0.321	3e-31
170057336	785	elongator complex protein 2 [Culex quinq	0.730	0.290	0.325	1e-28
195153495	793	GL17299 [Drosophila persimilis] gi|19411	0.320	0.126	0.633	2e-27
125811095	793	GA11261 [Drosophila pseudoobscura pseudo	0.320	0.126	0.613	1e-26
194884205	793	GG20140 [Drosophila erecta] gi|190659373	0.320	0.126	0.603	8e-26
307203230	778	Probable elongator complex protein 2 [Ha	0.756	0.303	0.295	1e-25

>gi|270013922|gb|EFA10370.1| hypothetical protein TcasGA2_TC012601 [Tribolium castaneum]

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/272 (38%), Positives = 134/272 (49%), Gaps = 57/272 (20%)

Query: 98  KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ 157
           K   LLS S+DKS+I+W  D +T LW E  RVGEVGGNTLGFYG  F P G  I+AHG+ 
Sbjct: 266 KSPQLLSSSLDKSMIIWEFDSSTNLWTEKVRVGEVGGNTLGFYGGVFSPDGHNILAHGYN 325

Query: 158 GSLHL---DVTTWKQIQTLPCHQLTITQ----------LAFSPDDTHLV----SVSRDRR 200
           G+ HL     + WK   T+  H   +T           L  S D T  +    S  +D  
Sbjct: 326 GAFHLWENASSGWKPCVTIGGHFAEVTDLAWDPQGEFLLTVSADQTTRIHAPWSDDKDAT 385

Query: 201 W-------------------GLYKRQSSGRLSLVACSDKTNGVHKR---------IIWGV 232
           W                     Y+  SS    ++   +      +          ++ G 
Sbjct: 386 WHEIARPQVHGYDLSSVAVLSRYRFASSAEEKVIRTFEAPRNFVENFARICKINDVVEGS 445

Query: 233 AWSHDSRYFLTISRDGVCVVWGLGE------------PPTEEDLVQNTLWPEVQKLYGHG 280
           A    +   L +S   V +  G G+            PPTEE L+QNTLWPEVQKLYGHG
Sbjct: 446 APKGAAVPSLGLSNKAVFLSEGGGDEESHFTEVVLTAPPTEETLLQNTLWPEVQKLYGHG 505

Query: 281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312
           YE+YSLA+S DG  LASACKAT PEHAAI++W
Sbjct: 506 YEVYSLASSPDGRFLASACKATTPEHAAILLW 537

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090664|ref|XP_974342.1| PREDICTED: similar to GA11261-PA [Tribolium castaneum]

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/272 (38%), Positives = 134/272 (49%), Gaps = 57/272 (20%)

Query: 98  KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ 157
           K   LLS S+DKS+I+W  D +T LW E  RVGEVGGNTLGFYG  F P G  I+AHG+ 
Sbjct: 266 KSPQLLSSSLDKSMIIWEFDSSTNLWTEKVRVGEVGGNTLGFYGGVFSPDGHNILAHGYN 325

Query: 158 GSLHL---DVTTWKQIQTLPCHQLTITQ----------LAFSPDDTHLV----SVSRDRR 200
           G+ HL     + WK   T+  H   +T           L  S D T  +    S  +D  
Sbjct: 326 GAFHLWENASSGWKPCVTIGGHFAEVTDLAWDPQGEFLLTVSADQTTRIHAPWSDDKDAT 385

Query: 201 W-------------------GLYKRQSSGRLSLVACSDKTNGVHKR---------IIWGV 232
           W                     Y+  SS    ++   +      +          ++ G 
Sbjct: 386 WHEIARPQVHGYDLSSVAVLSRYRFASSAEEKVIRTFEAPRNFVENFARICKINDVVEGS 445

Query: 233 AWSHDSRYFLTISRDGVCVVWGLGE------------PPTEEDLVQNTLWPEVQKLYGHG 280
           A    +   L +S   V +  G G+            PPTEE L+QNTLWPEVQKLYGHG
Sbjct: 446 APKGAAVPSLGLSNKAVFLSEGGGDEESHFTEVVLTAPPTEETLLQNTLWPEVQKLYGHG 505

Query: 281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312
           YE+YSLA+S DG  LASACKAT PEHAAI++W
Sbjct: 506 YEVYSLASSPDGRFLASACKATTPEHAAILLW 537

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862461|ref|XP_003706702.1| PREDICTED: probable elongator complex protein 2-like [Megachile rotundata]

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 139/280 (49%), Gaps = 58/280 (20%)

Query: 91  YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY 150
           Y  + ++  L LLSCS+DKS+I+W PD  TG+W E  RVGEVGGN +GFYGCKF   G  
Sbjct: 291 YPQQLNNNDLRLLSCSLDKSMIIWEPDKVTGIWSEKVRVGEVGGNLMGFYGCKFSKNGLN 350

Query: 151 IIAHGFQGSLHL-----DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR----- 200
           I+AHG+QGS H+     +V  W        H   +  L + P+   LV+ S D+      
Sbjct: 351 ILAHGYQGSFHIWEYSSEVKNWIPKPVPSGHFAEVVDLCWEPNGRFLVTASVDQTTRIHA 410

Query: 201 -WGLYKRQ---SSGR----------LSLVACSDKTNGVHKRIIWGVAWSHDSRY------ 240
            W L   +     GR          L+++      +G  ++++     S   +       
Sbjct: 411 PWKLGTTEFWHEIGRPQIHGYDMSCLAMLTPYTFASGAEEKVVRVFTASATFKNSLMKIA 470

Query: 241 ----FLTISRDGVCV-VWGLGEPPTEEDLVQ-----------------------NTLWPE 272
               F  I  D   V   GL    T +D ++                       NTLWPE
Sbjct: 471 NVDDFQNIVADSASVPALGLTNKATFDDNIKTKTENNNSENEEYIPPTEEELMQNTLWPE 530

Query: 273 VQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312
           +QKLYGHGYEI+S+AA HDG+LLA+ACK+T  EH+AI++W
Sbjct: 531 LQKLYGHGYEIFSIAARHDGSLLATACKSTSFEHSAILLW 570

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328766918|gb|EGF76970.1| hypothetical protein BATDEDRAFT_36146 [Batrachochytrium dendrobatidis JAM81]

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/272 (36%), Positives = 139/272 (51%), Gaps = 57/272 (20%)

Query: 98  KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ 157
           + L L+S S DKSI+VW PD  +  W+  AR+GEVGG TLGFYG  F P GD I+++G+ 
Sbjct: 357 QPLTLISASADKSIMVWQPDTHSESWIYKARLGEVGGATLGFYGAIFSPLGDMIVSNGYN 416

Query: 158 GSLHL------DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQS 208
           G+LH+        T+W     +  H  ++  +A+ P  T+L+S S D   R  G +KR +
Sbjct: 417 GALHIWKRSDDSYTSWSPSIGISGHFSSVENIAWDPSGTYLLSTSLDQTTRAVGYWKRDN 476

Query: 209 S------GR----------LSLVACSDKTNGVHKRIIW----------------GVAWSH 236
           +      GR          LS +      +G  ++++                 G+A   
Sbjct: 477 AISWHEIGRPQIHGYDLHCLSFIHKYQFISGADEKVLRVFSAPRAFAETVENLTGIAELP 536

Query: 237 DS----------------RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG 280
           D                   F  +S     +   L +PP EE L+Q+TLWPE  KLYGHG
Sbjct: 537 DEMANAGATNSTQVNPNISAFSAVSSPQAALSDALVQPPFEEHLLQHTLWPEANKLYGHG 596

Query: 281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312
           YEI S+A+S DGTL+ASACKA K EHAA+ +W
Sbjct: 597 YEIISVASSSDGTLVASACKAAKSEHAAVRLW 628

Source: Batrachochytrium dendrobatidis JAM81

Species: Batrachochytrium dendrobatidis

Genus: Batrachochytrium

Order: Rhizophydiales

Class: Chytridiomycetes

Phylum: Chytridiomycota

Superkingdom: Eukaryota

>gi|440791514|gb|ELR12752.1| WD domain, G-beta repeat-containing protein [Acanthamoeba castellanii str. Neff]

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 128/271 (47%), Gaps = 56/271 (20%)

Query: 98  KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ 157
           + + LLS SMD+S+ +W PDP TG+WL   RVGE+GGN LGF+G  FGP G YI+AHG+ 
Sbjct: 359 QPMALLSASMDRSMAIWRPDPETGVWLNDVRVGELGGNALGFFGGLFGPEGLYILAHGYN 418

Query: 158 GSLH-----------------LDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDR 199
           G+ H                 L++  W+   T+  H  ++  +++ P   ++VS+   D 
Sbjct: 419 GAFHLWKRQVTKVLQGEGVEDLELEAWEPCVTVSGHFGSVEDVSWDPSQRYVVSIHGYDM 478

Query: 200 RWGLYKRQSSGRL----------------SLVACSDKTNGV------------------- 224
               +   +S R                 + VA      GV                   
Sbjct: 479 SCLAFVNGASHRFVSGADEKVIRVFDAPRTFVATLAAITGVAAEPELAESRPLGANVPPL 538

Query: 225 ---HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY 281
              +K +  G     ++   +    + V     LG PP EE L+Q+TLWPE+ KLYGHG 
Sbjct: 539 GLSNKPVFEGEERPAEAADGMKFREEAVAEPVVLGVPPFEEHLMQSTLWPEIYKLYGHGD 598

Query: 282 EIYSLAASHDGTLLASACKATKPEHAAIIIW 312
            +  LA+S  G  +ASACK +KPE   +I+W
Sbjct: 599 NLVCLASSRSGKHIASACKGSKPEQCGVIVW 629

Source: Acanthamoeba castellanii str. Neff

Species: Acanthamoeba castellanii

Genus: Acanthamoeba

Superkingdom: Eukaryota

>gi|170057336|ref|XP_001864439.1| elongator complex protein 2 [Culex quinquefasciatus] gi|167876761|gb|EDS40144.1| elongator complex protein 2 [Culex quinquefasciatus]

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 137/304 (45%), Gaps = 76/304 (25%)

Query: 85  EGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144
           EG     H    + +L LLS S+DK++ +W+P P +G+W E  RVGEVGG++LGFYG KF
Sbjct: 280 EGWVYGVHFNKHNSKLRLLSSSIDKTLTIWSPSPDSGIWYENVRVGEVGGSSLGFYGGKF 339

Query: 145 GPRGDYIIAHGFQGSLHL------DVTTWKQIQTLPCHQLTITQLAFSPDDTH-LVSVSR 197
            P G  II HGFQGSLHL      + T W     +  H   +  LA+ P   H LV++S 
Sbjct: 340 SPDGKSIIGHGFQGSLHLWHQDPTNPTLWTPGTIIGGHFSAVRDLAWDPQGGHFLVTLSA 399

Query: 198 DRRWGLYKRQSSGR-----------------LSLVACSDKTNGVHKRII----------- 229
           D+   ++   S  R                 L+L++     +G  ++I+           
Sbjct: 400 DQTTRIHTEWSKARTWHEIARPQVHGYDMQCLALLSRYRLASGAEEKIVRVFQAPGNFVE 459

Query: 230 -----WGVAWSH--DSRYFLTISRDGVCV---------VWGLGEPPTEEDLVQNTLWPE- 272
                 GVA     D    L  +  G  V         V+ +   P  +      ++PE 
Sbjct: 460 NFRQLCGVAREADGDGEEILKTTPQGASVPSLGLSNKPVFNVDAEPEPDKKHVKDMYPEH 519

Query: 273 ------------------------VQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAA 308
                                   +QKLYGHGYEIY+LAA+ DG  LASA +AT  EHA 
Sbjct: 520 YFVPTTMNAPPTEETLMQNTLWPEMQKLYGHGYEIYALAATSDGRWLASASRATSVEHAK 579

Query: 309 IIIW 312
           I+IW
Sbjct: 580 ILIW 583

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195153495|ref|XP_002017661.1| GL17299 [Drosophila persimilis] gi|194113457|gb|EDW35500.1| GL17299 [Drosophila persimilis]

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNG 223
           T WKQ+Q L  HQLT+TQL+FSPD  +LVSVSRDRRW LY+RQ SS   +LVA +DKTNG
Sbjct: 592 TNWKQVQKLGGHQLTVTQLSFSPDAQYLVSVSRDRRWSLYERQESSAGYNLVATTDKTNG 651

Query: 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
           VH RIIW   WSHD R+F+T SRDG  V W  GE   E  L
Sbjct: 652 VHTRIIWACDWSHDGRHFVTSSRDGKVVAWKKGEQTGETSL 692

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125811095|ref|XP_001361747.1| GA11261 [Drosophila pseudoobscura pseudoobscura] gi|54636923|gb|EAL26326.1| GA11261 [Drosophila pseudoobscura pseudoobscura]

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNG 223
           + WKQ+Q L  HQLT+TQL+FSPD  +LVSVSRDRRW L++RQ SS   +LVA +DKTNG
Sbjct: 592 SNWKQVQKLGGHQLTVTQLSFSPDAQYLVSVSRDRRWSLFERQESSAGYNLVATTDKTNG 651

Query: 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
           VH RIIW   WSHD R+F+T SRDG  V W  GE   E  L
Sbjct: 652 VHTRIIWACDWSHDGRHFVTSSRDGKVVAWKKGEQTGESSL 692

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194884205|ref|XP_001976186.1| GG20140 [Drosophila erecta] gi|190659373|gb|EDV56586.1| GG20140 [Drosophila erecta]

 Score =  124 bits (310), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 74/101 (73%), Gaps = 1/101 (0%)

Query: 165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNG 223
           + WKQ+Q L  HQLT+TQL+FSPD  +L+SVSRDRRW LY+RQ +S    LVA +DKTNG
Sbjct: 593 SNWKQMQKLSGHQLTVTQLSFSPDARYLLSVSRDRRWCLYERQDTSVGYQLVASTDKTNG 652

Query: 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
           VH RIIW   WSHD ++F+T SRDG  VVW  GE  T+  L
Sbjct: 653 VHTRIIWSCDWSHDGQFFVTSSRDGKVVVWKKGEACTDSSL 693

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307203230|gb|EFN82385.1| Probable elongator complex protein 2 [Harpegnathos saltator]

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 142/332 (42%), Gaps = 96/332 (28%)

Query: 43  LTNHKSKVMAVKW--VLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQL 100
           L  H+S +  V W  +   +   +   L+S S DK+ I+WK+                  
Sbjct: 272 LYGHESWIYGVHWQPIKRENDGSQSIRLLSSSFDKSMIIWKF------------------ 313

Query: 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL 160
                           D + G+W E   VGEVGGN+LGFYGCKF P G +I+ + +QGS 
Sbjct: 314 ----------------DDSVGIWAEEVLVGEVGGNSLGFYGCKFAPDGLHILGYDYQGSF 357

Query: 161 HL-----DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--------------RW 201
           H+     ++  W        H   +  L + P    L++ S D+              RW
Sbjct: 358 HIWKYSQEIAKWLPRSAPSGHFSEVVDLCWEPKGRFLLTASTDKTTRIHAAWKDNLEERW 417

Query: 202 GLYKR-QSSGR----LSLVACSDKTNGVHKRIIWGVAWSH----------DSRYFLTISR 246
               R Q  G     L ++A     +G  ++++     +           D   F +I+ 
Sbjct: 418 HEIARPQVHGHDMSCLIMLAPYMYASGAEEKVVRVFTATSTFRNRLRSLADVEDFKSIAV 477

Query: 247 DGVCV-VWGLGEPPT-EEDLVQ------------------------NTLWPEVQKLYGHG 280
            G  V   GL    T +E++V+                        NTLWPE+QKLYGHG
Sbjct: 478 SGATVPSLGLTNKATFDEEIVEYKTVQNLTTKDSEYETPTEEELTQNTLWPELQKLYGHG 537

Query: 281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312
           YEI+ +AA HDG LLA+ACK+T  EHA II+W
Sbjct: 538 YEIFCMAARHDGCLLATACKSTNLEHATIILW 569

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
UNIPROTKB|Q5EBD9	824	elp2 "Elongator complex protei	0.400	0.151	0.419	7e-27
UNIPROTKB|E1BEP7	827	ELP2 "Uncharacterized protein"	0.342	0.129	0.478	3.7e-26
UNIPROTKB|I3L616	826	ELP2 "Uncharacterized protein"	0.342	0.129	0.469	4.7e-26
RGD|1306419	821	Elp2 "elongator acetyltransfer	0.288	0.109	0.552	5.1e-25
MGI|MGI:1889642	831	Elp2 "elongator acetyltransfer	0.285	0.107	0.515	6.4e-24
ZFIN|ZDB-GENE-060503-525	821	elp2 "elongation protein 2 hom	0.378	0.143	0.395	4.8e-45
UNIPROTKB|F1NMC6	822	ELP2 "Uncharacterized protein"	0.342	0.130	0.464	2.8e-26
UNIPROTKB|Q6IA86	826	ELP2 "Elongator complex protei	0.342	0.129	0.452	4.2e-25
FB|FBgn0033540	794	Elp2 "Elongator complex protei	0.320	0.125	0.603	2.9e-33
DICTYBASE|DDB_G0275651	901	elp2 "elongation protein 2" [D	0.330	0.114	0.4	1.4e-37

UNIPROTKB|Q5EBD9 elp2 "Elongator complex protein 2" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 258 (95.9 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
 Identities = 55/131 (41%), Positives = 77/131 (58%)

Query:   165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ------SSGRLSLVACS 218
             T+WKQ+Q+L  H LT+TQ+AFSPDD  L+ VSRDR W L+K+Q      +    +L A +
Sbjct:   599 TSWKQLQSLSYHNLTVTQMAFSPDDEFLLVVSRDRNWSLWKKQEGIPEQTEPTFTLYAST 658

Query:   219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG 278
             DK + VH RIIW   W+ DS+YF+T SRD   +VWG    P+  +   + L      L  
Sbjct:   659 DKNSCVHSRIIWACDWTPDSKYFVTGSRDKKVIVWGDCSLPSMNEEKSSALIRPCSSLLD 718

Query:   279 HGYEIYSLAAS 289
              G  I +++ S
Sbjct:   719 TGDSITAVSVS 729

GO:0000502 "proteasome complex" evidence=ISS

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=ISS

GO:0010950 "positive regulation of endopeptidase activity" evidence=ISS

GO:0043248 "proteasome assembly" evidence=ISS

GO:0061133 "endopeptidase activator activity" evidence=ISS

UNIPROTKB|E1BEP7 ELP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 263 (97.6 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
 Identities = 55/115 (47%), Positives = 73/115 (63%)

Query:   163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS--GRL----SLVA 216
             +  +WKQ+Q L  H LT+TQ+AFSPDD  L++VSRDR W L+KRQ +    L    SL A
Sbjct:   601 NTASWKQVQNLIFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFA 660

Query:   217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271
              ++K   VH RIIW   WS D +YF T SRD   VVWG  E  + +D V++++ P
Sbjct:   661 FTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDRKVVVWG--ECDSSDDAVEHSIGP 713

GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|I3L616 ELP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 261 (96.9 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
 Identities = 54/115 (46%), Positives = 73/115 (63%)

Query:   163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS--GRL----SLVA 216
             + T+WKQ+Q L  H LT+TQ+AFSPDD  L++VSRDR W L+KRQ +    L    SL A
Sbjct:   600 NTTSWKQVQNLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFA 659

Query:   217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271
              ++K   VH RIIW   WS D +YF T SRD   V WG  E  + +D +++++ P
Sbjct:   660 FTNKVTAVHSRIIWSCDWSPDGKYFFTGSRDKKVVAWG--ECDSGDDSIEHSIGP 712

GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

RGD|1306419 Elp2 "elongator acetyltransferase complex subunit 2" [Rattus norvegicus (taxid:10116)]

 Score = 261 (96.9 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
 Identities = 53/96 (55%), Positives = 65/96 (67%)

Query:   165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ--SSGRL----SLVACS 218
             T+WKQ+Q+L  H LT+TQ+AFSPDD  L++VSRDR W L+KRQ  +S       SL A +
Sbjct:   600 TSWKQVQSLAYHTLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDVTSAEFDPFFSLFAFT 659

Query:   219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254
             +K   VH RIIW   WS DS+YF T SRD   VVWG
Sbjct:   660 NKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWG 695

GO:0000502 "proteasome complex" evidence=ISS

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=ISS

GO:0008023 "transcription elongation factor complex" evidence=ISO

GO:0010950 "positive regulation of endopeptidase activity" evidence=ISS

GO:0019901 "protein kinase binding" evidence=IEA;ISO

GO:0033588 "Elongator holoenzyme complex" evidence=ISO;ISS

GO:0043248 "proteasome assembly" evidence=ISS

GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA;ISO

GO:0061133 "endopeptidase activator activity" evidence=ISS

GO:0003677 "DNA binding" evidence=ISO

MGI|MGI:1889642 Elp2 "elongator acetyltransferase complex subunit 2" [Mus musculus (taxid:10090)]

 Score = 249 (92.7 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
 Identities = 49/95 (51%), Positives = 62/95 (65%)

Query:   166 TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR------LSLVACSD 219
             +WKQ+Q+L  H LT+TQ+ FSPDD  L++VSRDR W L+KRQ +         SL A ++
Sbjct:   603 SWKQVQSLAFHTLTVTQMTFSPDDKFLLAVSRDRTWSLWKRQDATSSEFDPFFSLFAFTN 662

Query:   220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254
             K   VH RIIW   WS D++YF T SRD   VVWG
Sbjct:   663 KITSVHSRIIWSCDWSPDNKYFFTGSRDKKVVVWG 697

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008023 "transcription elongation factor complex" evidence=ISO

GO:0019901 "protein kinase binding" evidence=IDA

GO:0033588 "Elongator holoenzyme complex" evidence=ISO

GO:0046425 "regulation of JAK-STAT cascade" evidence=IDA

ZFIN|ZDB-GENE-060503-525 elp2 "elongation protein 2 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 253 (94.1 bits), Expect = 4.8e-45, Sum P(3) = 4.8e-45
 Identities = 49/124 (39%), Positives = 76/124 (61%)

Query:    87 NYLPYHMRDDS--KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144
             ++ P  ++ DS  + L LLS SMDK++I+W P+  +G+W+E  RVGEVGGNTLGFYGC+ 
Sbjct:   280 HWQPPSVKGDSVEQSLKLLSASMDKTMILWGPEEDSGMWVEMVRVGEVGGNTLGFYGCQM 339

Query:   145 GPRGDYIIAHGFQGSLHL---DVTT-WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR 200
              P G  I+AH F G+LHL   D    W+    +  H   +  +++ P+   +++V  D+ 
Sbjct:   340 SPDGSMILAHAFHGALHLWHHDSNQEWRPSVVISGHFNAVQDMSWDPEGEFIITVGSDQT 399

Query:   201 WGLY 204
               L+
Sbjct:   400 TRLF 403

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=ISS

GO:0000502 "proteasome complex" evidence=ISS

GO:0043248 "proteasome assembly" evidence=ISS

GO:0061133 "endopeptidase activator activity" evidence=ISS

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1NMC6 ELP2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 268 (99.4 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
 Identities = 52/112 (46%), Positives = 74/112 (66%)

Query:   165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR----LSLVACSDK 220
             ++WK+IQ+LP H LT+TQLAFSP+D  L++VSRDR W L++ + S       S  A +DK
Sbjct:   597 SSWKKIQSLPFHNLTVTQLAFSPNDKLLLAVSRDRNWSLWREEDSSESGPVFSCCAYTDK 656

Query:   221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE-PPTEEDLVQNTLWP 271
                VH RIIW   W+ DS+YF+T SRD   ++WG  + P T E +V +++ P
Sbjct:   657 NTAVHSRIIWSCDWTPDSKYFVTGSRDKKVIIWGQCDLPVTTEGIVLDSIKP 708

GO:0005737 "cytoplasm" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA

UNIPROTKB|Q6IA86 ELP2 "Elongator complex protein 2" [Homo sapiens (taxid:9606)]

 Score = 257 (95.5 bits), Expect = 4.2e-25, Sum P(2) = 4.2e-25
 Identities = 52/115 (45%), Positives = 73/115 (63%)

Query:   163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR------LSLVA 216
             + T+WKQ+Q L  H LT+TQ+AFSP++  L++VSRDR W L+K+Q +         SL A
Sbjct:   600 NTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFA 659

Query:   217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271
              ++K   VH RIIW   WS DS+YF T SRD   VVWG  E  + +D +++ + P
Sbjct:   660 FTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWG--ECDSTDDCIEHNIGP 712

GO:0033588 "Elongator holoenzyme complex" evidence=IDA

GO:0005730 "nucleolus" evidence=IC

GO:0005737 "cytoplasm" evidence=IDA;NAS

GO:0016591 "DNA-directed RNA polymerase II, holoenzyme" evidence=IC

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0003677 "DNA binding" evidence=IDA

GO:0008023 "transcription elongation factor complex" evidence=IDA

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=IC

FB|FBgn0033540 Elp2 "Elongator complex protein 2" [Drosophila melanogaster (taxid:7227)]

 Score = 307 (113.1 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
 Identities = 61/101 (60%), Positives = 72/101 (71%)

Query:   165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNG 223
             + WKQIQ L  HQLT+TQL+FSPD  +L+SVSRDRRW LY+RQ SS    LVA +DK+NG
Sbjct:   594 SNWKQIQKLSGHQLTVTQLSFSPDSRYLLSVSRDRRWCLYERQDSSVSYQLVASTDKSNG 653

Query:   224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
             VH RIIW   WSHD ++F+T SRDG  VVW   E   E  L
Sbjct:   654 VHTRIIWSCDWSHDGQFFVTSSRDGKVVVWKKEEDCKESSL 694

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=ISS

GO:0000502 "proteasome complex" evidence=ISS

GO:0043248 "proteasome assembly" evidence=ISS

GO:0061133 "endopeptidase activator activity" evidence=ISS

DICTYBASE|DDB_G0275651 elp2 "elongation protein 2" [Dictyostelium discoideum (taxid:44689)]

 Score = 223 (83.6 bits), Expect = 1.4e-37, Sum P(3) = 1.4e-37
 Identities = 44/110 (40%), Positives = 65/110 (59%)

Query:   102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH 161
             L+S SMDK+ IVW PD TTG+W++ +RVG++GGN LG YG  F P   YI++HG+ G+ H
Sbjct:   355 LISASMDKTAIVWRPDRTTGIWIDESRVGDMGGNILGQYGAVFSPCSQYILSHGYNGAFH 414

Query:   162 L-------DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLY 204
                       + W+    +  H   +  L +SPD ++ +S S DR   L+
Sbjct:   415 FWKQNTNQKSSFWEPQIVVSGHFGPVQDLMWSPDYSYFISCSTDRTLRLF 464

GO:0008023 "transcription elongation factor complex" evidence=ISS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	312
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-24
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-13
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	8e-13
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-11
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-10
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-05
smart00320	40	smart00320, WD40, WD40 repeats	6e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	9e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-04
smart00320	40	smart00320, WD40, WD40 repeats	8e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	0.002
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.003

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 99.7 bits (249), Expect = 2e-24
 Identities = 86/313 (27%), Positives = 115/313 (36%), Gaps = 70/313 (22%)

Query: 19  TLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNT 59
           TL  H   V  V                    W+ E G++L TL  H   V  V    + 
Sbjct: 4   TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG 63

Query: 60  SLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH----------LLSCSMDK 109
           +       L S S DKT  LW    E       +   +  +           L S S DK
Sbjct: 64  TY------LASGSSDKTIRLWDL--ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDK 115

Query: 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK 168
           +I VW  D  TG       +  + G+T       F P G ++ +    G++ L D+ T K
Sbjct: 116 TIKVW--DVETGK-----CLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK 168

Query: 169 QIQTLPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVH 225
            + TL  H   +  +AFSPD   L+S S D   + W L   +  G L            H
Sbjct: 169 CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR----------GH 218

Query: 226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS 285
           +  +  VA+S D     + S DG   VW         DL        VQ L GH   + S
Sbjct: 219 ENGVNSVAFSPDGYLLASGSEDGTIRVW---------DLRTGEC---VQTLSGHTNSVTS 266

Query: 286 LAASHDGTLLASA 298
           LA S DG  LAS 
Sbjct: 267 LAWSPDGKRLASG 279

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 87.8 bits (218), Expect = 4e-20
 Identities = 62/219 (28%), Positives = 89/219 (40%), Gaps = 41/219 (18%)

Query: 8   VVNGEGGKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKS 48
           + + E G+ + TLT H S V +V                    W+ E GK L TL  H  
Sbjct: 77  LWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTD 136

Query: 49  KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILW-------KYVSEGNYLP-YHMRDDSKQL 100
            V +V +       P+   + S S D T  LW            G+      +       
Sbjct: 137 WVNSVAF------SPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGE 190

Query: 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL 160
            LLS S D +I +W  D +TG  L T R     G+  G     F P G  + +    G++
Sbjct: 191 KLLSSSSDGTIKLW--DLSTGKCLGTLR-----GHENGVNSVAFSPDGYLLASGSEDGTI 243

Query: 161 HL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD 198
            + D+ T + +QTL  H  ++T LA+SPD   L S S D
Sbjct: 244 RVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSAD 282

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 87.0 bits (216), Expect = 9e-20
 Identities = 75/278 (26%), Positives = 109/278 (39%), Gaps = 56/278 (20%)

Query: 8   VVNGEGGKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKS 48
           V + E G++L TL  H   V  V                    W+ E G+ + TLT H S
Sbjct: 35  VWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTS 94

Query: 49  KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---LPYHMRD------DSKQ 99
            V +V +       P+ + L S S DKT  +W  V  G     L  H             
Sbjct: 95  YVSSVAF------SPDGRILSSSSRDKTIKVWD-VETGKCLTTLRGHTDWVNSVAFSPDG 147

Query: 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS 159
             + S S D +I +W  D  TG  + T       G+T       F P G+ +++    G+
Sbjct: 148 TFVASSSQDGTIKLW--DLRTGKCVATLT-----GHTGEVNSVAFSPDGEKLLSSSSDGT 200

Query: 160 LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR---WGLYKRQSSGRLSLV 215
           + L D++T K + TL  H+  +  +AFSPD   L S S D     W L   +    LS  
Sbjct: 201 IKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSG- 259

Query: 216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
                    H   +  +AWS D +   + S DG   +W
Sbjct: 260 ---------HTNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)

Query: 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL 160
            L + S D +I VW  D  TG  L T     + G+T           G Y+ +     ++
Sbjct: 23  LLATGSGDGTIKVW--DLETGELLRT-----LKGHTGPVRDVAASADGTYLASGSSDKTI 75

Query: 161 HL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD 219
            L D+ T + ++TL  H   ++ +AFSPD   L S SRD+   ++  ++   L+ +    
Sbjct: 76  RLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRG-- 133

Query: 220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH 279
                H   +  VA+S D  +  + S+DG   +W         DL        V  L GH
Sbjct: 134 -----HTDWVNSVAFSPDGTFVASSSQDGTIKLW---------DLRTGKC---VATLTGH 176

Query: 280 GYEIYSLAASHDGTLLASAC 299
             E+ S+A S DG  L S+ 
Sbjct: 177 TGEVNSVAFSPDGEKLLSSS 196

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 68.2 bits (165), Expect = 8e-13
 Identities = 70/306 (22%), Positives = 115/306 (37%), Gaps = 45/306 (14%)

Query: 7   DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK 66
            +     GK+L + ++    +    W+   GK L TL  H   V ++ +  +  L     
Sbjct: 160 SLAFSPDGKLLASGSSLDGTIK--LWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLL---- 213

Query: 67  DLVSCSLDKTAILWKYVSE---GNYLPYHMRDDSKQLH-----LLSCSMDKSIIVWAPDP 118
            + S S D T  LW   +     + L  H              L S S D +I +W    
Sbjct: 214 -IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRS 272

Query: 119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ--TLPC 175
           ++ L    +      G++       F P G  + +    G++ L D+ T K +   TL  
Sbjct: 273 SSSLLRTLS------GHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKG 326

Query: 176 HQLTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW 234
           H+  ++ L+FSPD + LV   S D    L+  ++   L  +             +  V++
Sbjct: 327 HEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN--------VLSVSF 378

Query: 235 SHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL 294
           S D R   + S DG   +W   +  T            ++ L GH   + SL  S DG  
Sbjct: 379 SPDGRVVSSGSTDGTVRLW---DLSTGS---------LLRNLDGHTSRVTSLDFSPDGKS 426

Query: 295 LASACK 300
           LAS   
Sbjct: 427 LASGSS 432

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 61.2 bits (149), Expect = 8e-11
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 19/129 (14%)

Query: 170 IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII 229
            +TL  H   +T +AFSPD   L + S D    ++  ++   L       +T   H   +
Sbjct: 2   RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELL-------RTLKGHTGPV 54

Query: 230 WGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS 289
             VA S D  Y  + S D    +W         DL        V+ L GH   + S+A S
Sbjct: 55  RDVAASADGTYLASGSSDKTIRLW---------DLETGEC---VRTLTGHTSYVSSVAFS 102

Query: 290 HDGTLLASA 298
            DG +L+S+
Sbjct: 103 PDGRILSSS 111

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 70/288 (24%), Positives = 104/288 (36%), Gaps = 40/288 (13%)

Query: 25  SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS 84
             +     +     +      H S V  +      S D     L S SLD T  LW   +
Sbjct: 87  GTIKLWDLDNGEKLIKSLEGLHDSSVSKLALS---SPDGNSILLASSSLDGTVKLWDLST 143

Query: 85  EG---NYLPYH-------MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG 134
            G     L  H             +L     S+D +I +W       L           G
Sbjct: 144 PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLA-------G 196

Query: 135 NTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQ-TLPCHQLTITQLAFSPDDTH 191
           +T       F P G  +IA     G++ L D++T K ++ TL  H  ++   +FSPD + 
Sbjct: 197 HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVS-SFSPDGSL 255

Query: 192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV 251
           L S S D    L+  +SS  L       +T   H   +  VA+S D +   + S DG   
Sbjct: 256 LASGSSDGTIRLWDLRSSSSLL------RTLSGHSSSVLSVAFSPDGKLLASGSSDGTVR 309

Query: 252 VWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
           +W           ++         L GH   + SL+ S DG+LL S  
Sbjct: 310 LW----------DLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGG 347

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 33/135 (24%)

Query: 8   VVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKS 48
           + +   GK + TLT H  +V +V ++ +G                   GK L TL  H++
Sbjct: 161 LWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHEN 220

Query: 49  KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--LPYH------MRDDSKQL 100
            V +V +       P+   L S S D T  +W   +      L  H      +       
Sbjct: 221 GVNSVAF------SPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGK 274

Query: 101 HLLSCSMDKSIIVWA 115
            L S S D +I +W 
Sbjct: 275 RLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 166 TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK 205
           + + ++TL  H   +T +AFSPD  +L S S D    L+ 
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 36  GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD 95
              +L TL+ H S V++V +       P+ K L S S D T  LW   +        ++ 
Sbjct: 273 SSSLLRTLSGHSSSVLSVAF------SPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKG 326

Query: 96  DSKQLHLLSCSMDKSIIVWA--PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA 153
               +  LS S D S++V     D T  LW                           +++
Sbjct: 327 HEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVS 386

Query: 154 HGF-QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR 211
            G   G++ L D++T   ++ L  H   +T L FSPD   L S S D    L+  ++S +
Sbjct: 387 SGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLK 446

Query: 212 LSLVACSDKTNG 223
               +   K   
Sbjct: 447 SVSFSPDGKVLA 458

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR 199
            K ++TL  H   +T +AFSPD   L S S D 
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDG 33

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 225 HKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
           H   +  VA+S D +Y  + S DG   +W
Sbjct: 11  HTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK 81
          GK+L TL  H   V +V +       P+   L S S D T  +W 
Sbjct: 1  GKLLRTLKGHTGPVTSVAF------SPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 19/134 (14%)

Query: 171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW 230
             L  H+ +IT +AFSPD   L+S S D    +          L+       G+H   + 
Sbjct: 59  LLLRGHEDSITSIAFSPDGELLLSGSSDGT--IKLWDLDNGEKLIK---SLEGLHDSSVS 113

Query: 231 GVAW-SHDSRYFLTI--SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA 287
            +A  S D    L    S DG   +W L           +T    ++ L GH   + SLA
Sbjct: 114 KLALSSPDGNSILLASSSLDGTVKLWDL-----------STPGKLIRTLEGHSESVTSLA 162

Query: 288 ASHDGTLLASACKA 301
            S DG LLAS    
Sbjct: 163 FSPDGKLLASGSSL 176

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 225 HKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
           H   +  VA+S D     + S DG   VW
Sbjct: 10  HTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 6/45 (13%)

Query: 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK 81
          G++L TL  H   V +V +       P+ K L S S D T  LW 
Sbjct: 2  GELLKTLKGHTGPVTSVAF------SPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0272|consensus	459		100.0
KOG0263|consensus	707		100.0
KOG0284|consensus	464		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0295|consensus	406		100.0
KOG0279|consensus	315		100.0
KOG0315|consensus	311		100.0
KOG0265|consensus	338		100.0
KOG0273|consensus	524		100.0
KOG0645|consensus	312		100.0
KOG0296|consensus	399		100.0
KOG0273|consensus	524		100.0
KOG0263|consensus	707		100.0
KOG0318|consensus	603		100.0
KOG0285|consensus	460		100.0
KOG0319|consensus	775		100.0
KOG0282|consensus	503		100.0
KOG0291|consensus	893		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0295|consensus	406		100.0
KOG0643|consensus	327		100.0
KOG0318|consensus	603		100.0
KOG0276|consensus	794		100.0
KOG0293|consensus	519		100.0
KOG0319|consensus	775		100.0
KOG0278|consensus	334		100.0
KOG0645|consensus	312		100.0
KOG0285|consensus	460		100.0
KOG0291|consensus	893		100.0
KOG0266|consensus	456		100.0
KOG0281|consensus	499		100.0
KOG0284|consensus	464		100.0
KOG0306|consensus	888		100.0
KOG0265|consensus	338		100.0
KOG1407|consensus	313		100.0
KOG0266|consensus	456		100.0
KOG0275|consensus	508		100.0
KOG0316|consensus	307		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG1407|consensus	313		100.0
KOG0306|consensus	888		100.0
KOG0289|consensus	506		100.0
KOG0305|consensus	484		100.0
KOG0283|consensus	712		99.98
KOG0313|consensus	423		99.98
PLN00181	793	protein SPA1-RELATED; Provisional	99.98
KOG0276|consensus	794		99.98
KOG0278|consensus	334		99.97
KOG0277|consensus	311		99.97
KOG0292|consensus	1202		99.97
KOG0316|consensus	307		99.97
KOG0292|consensus	1202		99.97
KOG0281|consensus	499		99.97
KOG0282|consensus	503		99.97
KOG0268|consensus	433		99.97
KOG0264|consensus	422		99.97
KOG0288|consensus	459		99.97
KOG2445|consensus	361		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0274|consensus	537		99.97
KOG0640|consensus	430		99.97
KOG0277|consensus	311		99.97
KOG0772|consensus	641		99.97
KOG0296|consensus	399		99.97
KOG1539|consensus	910		99.97
KOG0313|consensus	423		99.97
KOG1446|consensus	311		99.97
KOG1446|consensus	311		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG2096|consensus	420		99.97
KOG0293|consensus	519		99.96
PTZ00421	493	coronin; Provisional	99.96
KOG1408|consensus	1080		99.96
KOG0643|consensus	327		99.96
KOG0300|consensus	481		99.96
KOG1332|consensus	299		99.96
KOG0641|consensus	350		99.96
KOG0294|consensus	362		99.96
KOG0310|consensus	487		99.96
KOG0310|consensus	487		99.96
KOG1063|consensus	764		99.96
KOG1274|consensus	933		99.96
KOG0299|consensus	479		99.96
KOG0641|consensus	350		99.96
KOG4283|consensus	397		99.96
KOG0973|consensus	942		99.96
KOG0973|consensus	942		99.95
KOG0640|consensus	430		99.95
KOG0639|consensus	705		99.95
KOG0288|consensus	459		99.95
KOG0308|consensus	735		99.95
PTZ00420	568	coronin; Provisional	99.95
KOG0646|consensus	476		99.95
KOG0289|consensus	506		99.95
KOG0299|consensus	479		99.95
KOG1332|consensus	299		99.95
KOG0308|consensus	735		99.95
KOG0301|consensus	745		99.95
KOG0283|consensus	712		99.95
KOG0268|consensus	433		99.95
KOG0274|consensus	537		99.94
KOG0269|consensus	839		99.94
KOG2055|consensus	514		99.94
KOG2106|consensus	626		99.94
KOG0301|consensus	745		99.94
KOG1036|consensus	323		99.94
KOG0647|consensus	347		99.94
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.94
KOG0639|consensus	705		99.93
KOG2106|consensus	626		99.93
KOG0305|consensus	484		99.93
KOG0294|consensus	362		99.93
KOG0772|consensus	641		99.93
KOG0300|consensus	481		99.92
KOG1036|consensus	323		99.92
KOG0264|consensus	422		99.92
KOG0302|consensus	440		99.92
KOG0650|consensus	733		99.92
KOG2048|consensus	691		99.92
KOG0269|consensus	839		99.92
KOG0646|consensus	476		99.92
KOG0267|consensus	825		99.91
KOG0275|consensus	508		99.91
KOG2055|consensus	514		99.91
KOG2445|consensus	361		99.91
KOG0267|consensus	825		99.91
KOG1274|consensus	933		99.91
KOG0321|consensus	720		99.9
KOG1273|consensus	405		99.9
KOG1063|consensus	764		99.9
KOG1408|consensus	1080		99.9
KOG4328|consensus	498		99.9
KOG0647|consensus	347		99.89
KOG1539|consensus	910		99.89
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG2919|consensus	406		99.89
KOG1007|consensus	370		99.89
KOG4328|consensus	498		99.88
KOG0270|consensus	463		99.88
KOG0322|consensus	323		99.88
KOG4378|consensus	673		99.88
KOG2096|consensus	420		99.88
KOG4283|consensus	397		99.88
KOG1273|consensus	405		99.88
KOG2919|consensus	406		99.88
KOG1538|consensus	1081		99.87
KOG4378|consensus	673		99.87
KOG2048|consensus	691		99.87
KOG1188|consensus	376		99.87
KOG0302|consensus	440		99.87
KOG1587|consensus	555		99.86
KOG1034|consensus	385		99.86
KOG0321|consensus	720		99.86
KOG4227|consensus	609		99.86
KOG1009|consensus	434		99.84
KOG1445|consensus	1012		99.84
KOG0322|consensus	323		99.84
KOG0642|consensus	577		99.84
PRK11028	330	6-phosphogluconolactonase; Provisional	99.83
KOG1517|consensus	1387		99.83
KOG0270|consensus	463		99.83
KOG0290|consensus	364		99.83
KOG2110|consensus	391		99.82
KOG0307|consensus	1049		99.82
KOG1007|consensus	370		99.81
KOG0307|consensus	1049		99.81
KOG1524|consensus	737		99.8
KOG0290|consensus	364		99.8
KOG1963|consensus	792		99.8
KOG1538|consensus	1081		99.8
KOG0303|consensus	472		99.79
COG2319	466	FOG: WD40 repeat [General function prediction only	99.79
KOG1009|consensus	434		99.78
KOG0650|consensus	733		99.78
KOG0771|consensus	398		99.78
KOG0642|consensus	577		99.78
KOG1523|consensus	361		99.78
KOG0649|consensus	325		99.77
KOG1524|consensus	737		99.77
KOG1034|consensus	385		99.76
KOG1963|consensus	792		99.76
PRK01742	429	tolB translocation protein TolB; Provisional	99.76
KOG1310|consensus	758		99.76
KOG1240|consensus	1431		99.75
KOG2110|consensus	391		99.75
KOG2394|consensus	636		99.74
KOG0303|consensus	472		99.74
PRK11028	330	6-phosphogluconolactonase; Provisional	99.73
KOG1272|consensus	545		99.73
KOG1334|consensus	559		99.73
KOG1523|consensus	361		99.73
COG2319	466	FOG: WD40 repeat [General function prediction only	99.73
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.72
KOG1445|consensus	1012		99.72
KOG1517|consensus	1387		99.72
KOG0771|consensus	398		99.71
PRK01742	429	tolB translocation protein TolB; Provisional	99.71
KOG2394|consensus	636		99.71
KOG0644|consensus	1113		99.7
KOG1188|consensus	376		99.7
KOG2111|consensus	346		99.69
KOG1240|consensus	1431		99.68
KOG1310|consensus	758		99.68
KOG1334|consensus	559		99.67
PRK03629	429	tolB translocation protein TolB; Provisional	99.67
KOG0649|consensus	325		99.67
KOG4497|consensus	447		99.67
KOG1587|consensus	555		99.65
PRK04922	433	tolB translocation protein TolB; Provisional	99.64
PRK02889	427	tolB translocation protein TolB; Provisional	99.64
KOG2111|consensus	346		99.64
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.63
KOG2321|consensus	703		99.63
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.61
KOG4497|consensus	447		99.61
PRK03629	429	tolB translocation protein TolB; Provisional	99.61
KOG2139|consensus	445		99.61
KOG1272|consensus	545		99.61
KOG3881|consensus	412		99.61
KOG2139|consensus	445		99.61
KOG0644|consensus	1113		99.61
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.6
KOG3881|consensus	412		99.6
PRK05137	435	tolB translocation protein TolB; Provisional	99.6
PRK02889	427	tolB translocation protein TolB; Provisional	99.59
PRK04922	433	tolB translocation protein TolB; Provisional	99.58
PRK05137	435	tolB translocation protein TolB; Provisional	99.56
KOG4227|consensus	609		99.56
KOG1354|consensus	433		99.52
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.51
KOG1409|consensus	404		99.5
KOG4547|consensus	541		99.5
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.49
KOG0974|consensus	967		99.48
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.48
PRK00178	430	tolB translocation protein TolB; Provisional	99.48
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.47
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.45
KOG0974|consensus	967		99.45
PRK01029	428	tolB translocation protein TolB; Provisional	99.45
KOG0280|consensus	339		99.44
PRK04792	448	tolB translocation protein TolB; Provisional	99.44
KOG2321|consensus	703		99.41
PRK01029	428	tolB translocation protein TolB; Provisional	99.4
KOG4547|consensus	541		99.39
KOG2041|consensus	1189		99.39
PRK04792	448	tolB translocation protein TolB; Provisional	99.39
PRK00178	430	tolB translocation protein TolB; Provisional	99.38
KOG2315|consensus	566		99.35
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.33
KOG2315|consensus	566		99.33
KOG0280|consensus	339		99.32
KOG4532|consensus	344		99.31
KOG2314|consensus	698		99.31
KOG1354|consensus	433		99.3
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.29
KOG1409|consensus	404		99.29
KOG4190|consensus	1034		99.26
KOG1064|consensus	2439		99.22
COG4946	668	Uncharacterized protein related to the periplasmic	99.22
KOG1064|consensus	2439		99.21
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.2
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.2
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.18
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.16
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.14
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.13
KOG3914|consensus	390		99.13
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.12
KOG3914|consensus	390		99.11
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.1
KOG2066|consensus	846		99.1
PRK04043	419	tolB translocation protein TolB; Provisional	99.1
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.09
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.08
KOG1275|consensus	1118		99.06
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.05
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	99.05
KOG2314|consensus	698		99.04
COG4946	668	Uncharacterized protein related to the periplasmic	99.03
PRK04043	419	tolB translocation protein TolB; Provisional	99.03
KOG4190|consensus	1034		99.01
KOG0882|consensus	558		99.01
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.99
KOG4532|consensus	344		98.99
KOG4714|consensus	319		98.93
KOG4714|consensus	319		98.9
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.88
KOG2695|consensus	425		98.87
KOG0309|consensus	1081		98.85
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.85
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.82
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.81
KOG2041|consensus	1189		98.81
KOG1912|consensus	1062		98.8
KOG1920|consensus	1265		98.8
KOG0309|consensus	1081		98.79
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.78
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.74
KOG2114|consensus	933		98.7
KOG1912|consensus	1062		98.67
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.66
KOG2695|consensus	425		98.64
KOG2066|consensus	846		98.6
KOG0882|consensus	558		98.53
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.53
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.47
KOG1832|consensus	1516		98.47
PRK02888	635	nitrous-oxide reductase; Validated	98.42
PRK02888	635	nitrous-oxide reductase; Validated	98.42
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.41
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.31
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.3
KOG1008|consensus	783		98.28
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.26
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.24
KOG3617|consensus	1416		98.24
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.24
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.2
KOG1275|consensus	1118		98.19
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.16
KOG1920|consensus	1265		98.12
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.12
KOG4640|consensus	665		98.1
KOG1645|consensus	463		98.07
KOG4640|consensus	665		98.06
KOG3621|consensus	726		98.04
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.03
KOG1645|consensus	463		98.01
KOG3621|consensus	726		98.01
KOG1008|consensus	783		98.01
KOG4649|consensus	354		98.0
KOG3617|consensus	1416		98.0
KOG2114|consensus	933		97.92
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.91
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.84
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.83
KOG1832|consensus	1516		97.79
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.79
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.68
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.68
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.64
COG3391	381	Uncharacterized conserved protein [Function unknow	97.64
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.6
KOG4649|consensus	354		97.6
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.57
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.51
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.5
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.49
KOG4441|consensus	571		97.48
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	97.45
KOG2395|consensus	644		97.39
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.37
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.36
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.33
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.33
PRK13616	591	lipoprotein LpqB; Provisional	97.32
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.22
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.16
KOG2079|consensus	1206		97.15
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.15
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.13
PRK13616	591	lipoprotein LpqB; Provisional	97.12
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.1
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.09
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.07
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.02
KOG4499|consensus	310		96.98
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.97
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	96.96
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.9
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.9
COG3391	381	Uncharacterized conserved protein [Function unknow	96.85
KOG2444|consensus	238		96.82
KOG2395|consensus	644		96.76
KOG4441|consensus	571		96.74
PHA02713	557	hypothetical protein; Provisional	96.7
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.69
PHA02713	557	hypothetical protein; Provisional	96.67
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.65
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.62
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.62
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	96.6
KOG2079|consensus	1206		96.59
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.57
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.51
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.51
KOG2444|consensus	238		96.45
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.43
KOG2377|consensus	657		96.31
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.23
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	96.21
PRK13684	334	Ycf48-like protein; Provisional	96.2
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.17
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.15
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.1
KOG3630|consensus	1405		96.07
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	95.84
KOG1916|consensus	1283		95.84
PLN00033	398	photosystem II stability/assembly factor; Provisio	95.75
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.72
KOG1897|consensus	1096		95.56
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	95.54
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.52
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.5
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.41
PHA03098	534	kelch-like protein; Provisional	95.33
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.27
PHA03098	534	kelch-like protein; Provisional	95.24
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.08
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.05
KOG3630|consensus	1405		94.81
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.64
PF13449	326	Phytase-like: Esterase-like activity of phytase	94.58
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	94.51
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	94.42
KOG4460|consensus	741		94.35
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	94.28
COG5167	776	VID27 Protein involved in vacuole import and degra	94.16
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	93.86
PHA02790	480	Kelch-like protein; Provisional	93.51
COG5167	776	VID27 Protein involved in vacuole import and degra	93.45
PF14727	418	PHTB1_N: PTHB1 N-terminus	93.4
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.36
KOG1900|consensus	1311		93.35
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	93.12
KOG4499|consensus	310		93.01
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	92.83
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	92.8
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	92.76
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	92.49
KOG1916|consensus	1283		92.42
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	92.36
PRK10115	686	protease 2; Provisional	92.17
COG4590	733	ABC-type uncharacterized transport system, permeas	92.01
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	91.96
KOG2377|consensus	657		91.95
KOG2280|consensus	829		91.56
PRK13684	334	Ycf48-like protein; Provisional	91.16
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	91.11
PF14727	418	PHTB1_N: PTHB1 N-terminus	90.83
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	90.74
PF13449	326	Phytase-like: Esterase-like activity of phytase	90.6
PHA02790	480	Kelch-like protein; Provisional	90.51
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	90.47
PLN00033	398	photosystem II stability/assembly factor; Provisio	90.01
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	89.92
KOG2247|consensus	615		89.35
KOG3616|consensus	1636		89.2
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	88.98
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	88.9
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	88.72
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	88.52
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	88.05
KOG4659|consensus	1899		87.98
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	87.98
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	87.46
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	87.35
COG5308	1263	NUP170 Nuclear pore complex subunit [Intracellular	87.28
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	86.4
COG4590	733	ABC-type uncharacterized transport system, permeas	85.92
PLN02153	341	epithiospecifier protein	85.69
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	85.4
KOG1900|consensus	1311		85.23
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	84.96
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	83.66
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	83.52
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	82.52
KOG1520|consensus	376		82.2
PRK13615	557	lipoprotein LpqB; Provisional	82.04
PLN02193	470	nitrile-specifier protein	81.88
KOG3616|consensus	1636		81.57
KOG1520|consensus	376		81.34
COG5276	370	Uncharacterized conserved protein [Function unknow	81.16
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	80.56
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	80.36

>KOG0271|consensus

Probab=100.00  E-value=1.1e-46  Score=285.47  Aligned_cols=270  Identities=25%  Similarity=0.387  Sum_probs=229.8

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCC--------------------CceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEG--------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~--------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      -++|+..+-.+++++++|+.-|.|++|+|++                    .+..+.|.+|...|++++|.|- -+.+..
T Consensus       139 vR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~-hl~p~~  217 (480)
T KOG0271|consen  139 VRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPL-HLVPPC  217 (480)
T ss_pred             EEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeeccc-ccCCCc
Confidence            4789999999999999999999999988765                    2345678999999999999884 455667


Q ss_pred             ceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      ++||+++.||.|+|||+..+.+.        .+.+..+..++ ++++++.|++|++|+...  +.+...     +.+|..
T Consensus       218 r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~d--G~~~r~-----lkGHah  289 (480)
T KOG0271|consen  218 RRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALD--GKLCRE-----LKGHAH  289 (480)
T ss_pred             cceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccc--hhHHHh-----hcccch
Confidence            89999999999999999887663        44555555443 899999999999999887  333333     347877


Q ss_pred             ceeEEEEC-----------CCCC-------------------------eEEEeecCCeEEEecccCceee------eecc
Q psy15191        138 GFYGCKFG-----------PRGD-------------------------YIIAHGFQGSLHLDVTTWKQIQ------TLPC  175 (312)
Q Consensus       138 ~v~~~~~~-----------~~~~-------------------------~l~~~~~~~~i~~d~~~~~~~~------~~~~  175 (312)
                      .|+.++.+           |.++                         .|++|++|..+.+    |+...      ...+
T Consensus       290 wvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlfl----W~p~~~kkpi~rmtg  365 (480)
T KOG0271|consen  290 WVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFL----WNPFKSKKPITRMTG  365 (480)
T ss_pred             heeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEE----ecccccccchhhhhc
Confidence            78777766           3333                         4999999999999    65544      4559


Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      |..-|+.+.|+||++++++++.|..|++||.++++.+..+++       |-..|+.++|+.|.++|++|+.|.++++||+
T Consensus       366 Hq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG-------Hv~~VYqvawsaDsRLlVS~SkDsTLKvw~V  438 (480)
T KOG0271|consen  366 HQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG-------HVAAVYQVAWSADSRLLVSGSKDSTLKVWDV  438 (480)
T ss_pred             hhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhh-------ccceeEEEEeccCccEEEEcCCCceEEEEEe
Confidence            999999999999999999999999999999999999999888       9999999999999999999999999999999


Q ss_pred             CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++.+            ....+.||...|.++.|+|||..+++|+.     |..+++|
T Consensus       439 ~tkK------------l~~DLpGh~DEVf~vDwspDG~rV~sggk-----dkv~~lw  478 (480)
T KOG0271|consen  439 RTKK------------LKQDLPGHADEVFAVDWSPDGQRVASGGK-----DKVLRLW  478 (480)
T ss_pred             eeee------------ecccCCCCCceEEEEEecCCCceeecCCC-----ceEEEee
Confidence            8874            67788999999999999999999999954     5559999

>KOG0272|consensus

Probab=100.00  E-value=5.5e-46  Score=284.67  Aligned_cols=246  Identities=24%  Similarity=0.382  Sum_probs=223.4

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~  103 (312)
                      |+..+...+.+|.+|...|.++.|+|.    .++..+|||+.||++++|++++...        ..+.-..++|+|.+|+
T Consensus       202 W~~~~~~~~~~l~gH~~~v~~~~fhP~----~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~  277 (459)
T KOG0272|consen  202 WSVPQCNLLQTLRGHTSRVGAAVFHPV----DSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLG  277 (459)
T ss_pred             eecCCcceeEEEeccccceeeEEEccC----CCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceee
Confidence            999999999999999999999999997    3467899999999999999988654        3566778899999999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.|.+-++||+++.....       ...+|...|.+++|+|||.++++|+.|..-++ |+++++.+..+.+|..+|.+
T Consensus       278 TasfD~tWRlWD~~tk~ElL-------~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~  350 (459)
T KOG0272|consen  278 TASFDSTWRLWDLETKSELL-------LQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILS  350 (459)
T ss_pred             ecccccchhhcccccchhhH-------hhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceee
Confidence            99999999999999854322       22489999999999999999999999999999 99999999999999999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCC
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      ++|+|+|..|+||+.|++++|||++....+..+..       |..-|+.|.|+| .|.+|++++.|++++||...+    
T Consensus       351 V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA-------H~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~----  419 (459)
T KOG0272|consen  351 VAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA-------HSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRT----  419 (459)
T ss_pred             EeECCCceEEeecCCCCcEEEeeecccccceeccc-------ccchhhheEecccCCeEEEEcccCcceeeecCCC----
Confidence            99999999999999999999999998888777776       899999999999 788999999999999997554    


Q ss_pred             cccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        262 EDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                              |.+++.+.||.+.|.+++.+|++++++|++.|++     +++|
T Consensus       420 --------~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT-----~KLW  457 (459)
T KOG0272|consen  420 --------WSPLKSLAGHEGKVISLDISPDSQAIATSSFDRT-----IKLW  457 (459)
T ss_pred             --------cccchhhcCCccceEEEEeccCCceEEEeccCce-----eeec
Confidence                    4589999999999999999999999999977777     9999

>KOG0271|consensus

Probab=100.00  E-value=2.2e-43  Score=267.52  Aligned_cols=260  Identities=24%  Similarity=0.331  Sum_probs=216.4

Q ss_pred             eEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191         15 KVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK   75 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg   75 (312)
                      ++-..+.||.++|.++.                   ||+++..+..+.++|...|.|++|+|+      |+.||+|+.||
T Consensus       106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPD------gk~iASG~~dg  179 (480)
T KOG0271|consen  106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPD------GKKIASGSKDG  179 (480)
T ss_pred             eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCC------cchhhccccCC
Confidence            45566788999998888                   455556677889999999999999999      99999999999


Q ss_pred             cEEEeeecCCccc------------ccccccC--CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         76 TAILWKYVSEGNY------------LPYHMRD--DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        76 ~i~vw~~~~~~~~------------~~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      +|++||..+++..            .+.|.+.  .+...+|++++.||.++|||+..+  .++...     .+|..+|+|
T Consensus       180 ~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~--~~~~~l-----sgHT~~VTC  252 (480)
T KOG0271|consen  180 SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG--TCVRTL-----SGHTASVTC  252 (480)
T ss_pred             eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc--eEEEEe-----ccCccceEE
Confidence            9999999888762            2223222  456668999999999999999873  333333     489999999


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC-----------CCC--------------------
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS-----------PDD--------------------  189 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~-----------~~~--------------------  189 (312)
                      ++|.-+| ++++++.|++|++ +...+.+.+.+++|...|+.++++           |.+                    
T Consensus       253 vrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~  331 (480)
T KOG0271|consen  253 VRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAV  331 (480)
T ss_pred             EEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHh
Confidence            9997655 7999999999999 555566777888999999999877           223                    


Q ss_pred             -----CEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc
Q psy15191        190 -----THLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED  263 (312)
Q Consensus       190 -----~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  263 (312)
                           ..|++|+.|.++.+|+....+ ++....+       |..-|+.+.|+||++++|+++.|..|++||-.+++    
T Consensus       332 ~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtg-------Hq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk----  400 (480)
T KOG0271|consen  332 LKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTG-------HQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK----  400 (480)
T ss_pred             hccCcceeEEecCCceEEEecccccccchhhhhc-------hhhheeeEEECCCccEEEEeecccceeeeeCCCcc----
Confidence                 359999999999999976443 4434444       88899999999999999999999999999999884    


Q ss_pred             cccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        264 LVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                              .+..+.||-..|+.++|+.|.++|++||.|.+     +++|
T Consensus       401 --------~lasfRGHv~~VYqvawsaDsRLlVS~SkDsT-----LKvw  436 (480)
T KOG0271|consen  401 --------FLASFRGHVAAVYQVAWSADSRLLVSGSKDST-----LKVW  436 (480)
T ss_pred             --------hhhhhhhccceeEEEEeccCccEEEEcCCCce-----EEEE
Confidence                    78899999999999999999999999977766     9998

>KOG0286|consensus

Probab=100.00  E-value=3.4e-40  Score=241.95  Aligned_cols=261  Identities=22%  Similarity=0.304  Sum_probs=223.2

Q ss_pred             EEEEeccCCCceEEEEEeCCCCceE-------------------EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191         16 VLYTLTNHKSKVMAVKWNGEGGKVL-------------------YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT   76 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~w~~~~~~~~-------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~   76 (312)
                      .-.+|++|.++|+++.|.+++..++                   ..++-....|..++|+|.      |+++|.|+.|+.
T Consensus        47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPS------g~~VAcGGLdN~  120 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPS------GNFVACGGLDNK  120 (343)
T ss_pred             eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCC------CCeEEecCcCce
Confidence            3478999999999999988774433                   233334567888899998      999999999999


Q ss_pred             EEEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191         77 AILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC  142 (312)
Q Consensus        77 i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~  142 (312)
                      ..||++.+...              -.+.++.+-. ...|++++.|.+..+||+++++  ..     ..+.+|.+.|.++
T Consensus       121 Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~--~~-----~~f~GH~gDV~sl  192 (343)
T KOG0286|consen  121 CSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ--QT-----QVFHGHTGDVMSL  192 (343)
T ss_pred             eEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccce--EE-----EEecCCcccEEEE
Confidence            99999986522              1222333333 4489999999999999999844  22     2345999999999


Q ss_pred             EECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        143 KFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       143 ~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      .++| +++.+++|+.|+..++ |++....++.+.+|...|+++.|.|+|.-|++|+.|++.++||++..+.+..+.... 
T Consensus       193 sl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~-  271 (343)
T KOG0286|consen  193 SLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDS-  271 (343)
T ss_pred             ecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCc-
Confidence            9999 9999999999999999 888888899999999999999999999999999999999999999999988887443 


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                          ...+|++++||..|++|++|..|..+.+||.-.+.            .+..+.+|+..|+++..+|||..++|||.
T Consensus       272 ----~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e------------~vg~L~GHeNRvScl~~s~DG~av~TgSW  335 (343)
T KOG0286|consen  272 ----IICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE------------RVGVLAGHENRVSCLGVSPDGMAVATGSW  335 (343)
T ss_pred             ----ccCCceeEEEcccccEEEeeecCCceeEeeccccc------------eEEEeeccCCeeEEEEECCCCcEEEecch
Confidence                45679999999999999999999999999987763            68889999999999999999999999988


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                      |..     +|||
T Consensus       336 Ds~-----lriW  342 (343)
T KOG0286|consen  336 DST-----LRIW  342 (343)
T ss_pred             hHh-----eeec
Confidence            888     9999

>KOG0279|consensus

Probab=100.00  E-value=3.4e-40  Score=240.36  Aligned_cols=269  Identities=20%  Similarity=0.237  Sum_probs=214.3

Q ss_pred             eEEEEeccCCCceEEEE--------------------EeC-----CCCceEEEEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191         15 KVLYTLTNHKSKVMAVK--------------------WNG-----EGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~--------------------w~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      ....++++|++.|..++                    |..     ..|.+++.|+||...|..+..+++      |++.+
T Consensus         6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~d------g~~al   79 (315)
T KOG0279|consen    6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSD------GNFAL   79 (315)
T ss_pred             eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccC------CceEE
Confidence            34456777777777766                    443     237889999999999999999999      99999


Q ss_pred             EecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         70 SCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      +++.|+++++||+.+++.        ..+....++++...+++|+.|++|++|++..   .+..+..  . ..+..-|.+
T Consensus        80 S~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g---~ck~t~~--~-~~~~~WVsc  153 (315)
T KOG0279|consen   80 SASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG---VCKYTIH--E-DSHREWVSC  153 (315)
T ss_pred             eccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc---cEEEEEe--c-CCCcCcEEE
Confidence            999999999999999865        3456667788999999999999999999885   2233322  1 123778999


Q ss_pred             EEECCC--CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        142 CKFGPR--GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       142 ~~~~~~--~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      +.|+|+  ...+++++.|+.+++ |+++.++...+.+|++.++.+++||||...++|+.||.+.+||++..+.+..+.  
T Consensus       154 vrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--  231 (315)
T KOG0279|consen  154 VRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--  231 (315)
T ss_pred             EEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--
Confidence            999997  688999999999999 888888888899999999999999999999999999999999999998877766  


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                            +...|.+++|+|+.-.|+.+. +..|+|||++.......+...-..+   ......-...+++|++||..|++|
T Consensus       232 ------a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~---s~~~~~~~clslaws~dG~tLf~g  301 (315)
T KOG0279|consen  232 ------AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGP---SSKAGDPICLSLAWSADGQTLFAG  301 (315)
T ss_pred             ------CCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhcccccccc---ccccCCcEEEEEEEcCCCcEEEee
Confidence                  788899999999876666554 4459999999875443321110000   011113345688999999999999


Q ss_pred             ecCCCcccceEEeC
Q psy15191        299 CKATKPEHAAIIIW  312 (312)
Q Consensus       299 s~d~~~~dg~i~iW  312 (312)
                           ..|+.|++|
T Consensus       302 -----~td~~irv~  310 (315)
T KOG0279|consen  302 -----YTDNVIRVW  310 (315)
T ss_pred             -----ecCCcEEEE
Confidence                 666669998

>KOG0272|consensus

Probab=100.00  E-value=7.2e-42  Score=262.16  Aligned_cols=231  Identities=19%  Similarity=0.297  Sum_probs=201.3

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCC--CceEEEEeCCCcEEEE
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSK--QLHLLSCSMDKSIIVW  114 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~--~~~l~~~~~d~~i~i~  114 (312)
                      +-..+|..+.|+++      ++.|+||+.+|.++||+..+....        .+....++|.  +..+++|+.||++++|
T Consensus       173 gd~rPis~~~fS~d------s~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw  246 (459)
T KOG0272|consen  173 GDTRPISGCSFSRD------SKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLW  246 (459)
T ss_pred             cCCCcceeeEeecC------CCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeee
Confidence            55788999999998      999999999999999999877542        2222223333  5589999999999999


Q ss_pred             cCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEE
Q psy15191        115 APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       115 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  193 (312)
                      ++.+.+       ++..+.+|...|..++|+|+|++|++++.|.+.++ |+++.......++|...|.+++|+|||..++
T Consensus       247 ~~~~e~-------~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~  319 (459)
T KOG0272|consen  247 KLSQET-------PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAA  319 (459)
T ss_pred             ccCCCc-------chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceee
Confidence            998742       44455689999999999999999999999999999 5555555555669999999999999999999


Q ss_pred             EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccccee
Q psy15191        194 SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV  273 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  273 (312)
                      +|+.|..-+|||++++..+..+.+       |..+|.+|+|+|+|..||+|+.|++++|||++...            ++
T Consensus       320 tGGlD~~~RvWDlRtgr~im~L~g-------H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~------------~l  380 (459)
T KOG0272|consen  320 TGGLDSLGRVWDLRTGRCIMFLAG-------HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS------------EL  380 (459)
T ss_pred             ccCccchhheeecccCcEEEEecc-------cccceeeEeECCCceEEeecCCCCcEEEeeecccc------------cc
Confidence            999999999999999999999888       99999999999999999999999999999998874            68


Q ss_pred             EEeeccCcceeEEEecc-CCCeEEEEecCCCcccceEEeC
Q psy15191        274 QKLYGHGYEIYSLAASH-DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       274 ~~~~~~~~~v~~~~~s~-~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..+.+|..-|+.|.|+| .|.+|+|+|.|++     ++||
T Consensus       381 y~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t-----~kiW  415 (459)
T KOG0272|consen  381 YTIPAHSNLVSQVKYSPQEGYFLVTASYDNT-----VKIW  415 (459)
T ss_pred             eecccccchhhheEecccCCeEEEEcccCcc-----eeee
Confidence            89999999999999998 7899999966655     9999

>KOG0263|consensus

Probab=100.00  E-value=7e-39  Score=263.42  Aligned_cols=237  Identities=24%  Similarity=0.412  Sum_probs=205.0

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------------------------
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------------------------   87 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------------------------   87 (312)
                      +..++..-...++|..|+++      +..||.|-.|..|++|.+...+.                               
T Consensus       370 c~YT~~nt~~~v~ca~fSdd------ssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~  443 (707)
T KOG0263|consen  370 CMYTFHNTYQGVTCAEFSDD------SSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGT  443 (707)
T ss_pred             EEEEEEEcCCcceeEeecCC------cchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCce
Confidence            34555555678999999998      88999999999999999875321                               


Q ss_pred             --------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe
Q psy15191         88 --------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS  159 (312)
Q Consensus        88 --------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~  159 (312)
                              -.++-..++|+..+|++++.|+++++|.+.+......  .     .+|..+|..+.|+|.|-++++++.|++
T Consensus       444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~--y-----~GH~~PVwdV~F~P~GyYFatas~D~t  516 (707)
T KOG0263|consen  444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVI--Y-----KGHLAPVWDVQFAPRGYYFATASHDQT  516 (707)
T ss_pred             eEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEE--e-----cCCCcceeeEEecCCceEEEecCCCce
Confidence                    1445556688889999999999999999998543322  2     389999999999999999999999999


Q ss_pred             EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        160 LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       160 i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                      .++ .....+..+.+.+|.+.|.|+.|+|+..|+++||.|.++++||..++...+.+.+       |.++|++++|+|+|
T Consensus       517 ArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-------H~~~V~al~~Sp~G  589 (707)
T KOG0263|consen  517 ARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-------HKGPVTALAFSPCG  589 (707)
T ss_pred             eeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-------CCCceEEEEEcCCC
Confidence            999 3333345555669999999999999999999999999999999999999999987       99999999999999


Q ss_pred             ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++|++|++||.|.+||+..+.            .+..+.+|.+.|.++.||.+|..||+||.|.+     |++|
T Consensus       590 r~LaSg~ed~~I~iWDl~~~~------------~v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dns-----V~lW  646 (707)
T KOG0263|consen  590 RYLASGDEDGLIKIWDLANGS------------LVKQLKGHTGTIYSLSFSRDGNVLASGGADNS-----VRLW  646 (707)
T ss_pred             ceEeecccCCcEEEEEcCCCc------------chhhhhcccCceeEEEEecCCCEEEecCCCCe-----EEEE
Confidence            999999999999999999974            67888999999999999999999999966555     9999

>KOG0284|consensus

Probab=100.00  E-value=7.3e-39  Score=244.76  Aligned_cols=254  Identities=22%  Similarity=0.328  Sum_probs=216.6

Q ss_pred             CCCceEEEEEeCCCCceEE-------------------EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec
Q psy15191         23 HKSKVMAVKWNGEGGKVLY-------------------TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV   83 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~-------------------~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~   83 (312)
                      -+..|..+.|.+++.+++.                   .+..|..+|.++.|+++      +.+++||+.+|.|++|+..
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~------g~wmiSgD~gG~iKyWqpn  168 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHN------GTWMISGDKGGMIKYWQPN  168 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccC------CCEEEEcCCCceEEecccc
Confidence            4567888899998655432                   24579999999999999      9999999999999999876


Q ss_pred             CCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee
Q psy15191         84 SEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG  155 (312)
Q Consensus        84 ~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  155 (312)
                      -...        ..+..++++++...|++++.||+|+|||....+...+       +.+|...|.++.|+|...++++++
T Consensus       169 mnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~v-------L~GHgwdVksvdWHP~kgLiasgs  241 (464)
T KOG0284|consen  169 MNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERV-------LRGHGWDVKSVDWHPTKGLIASGS  241 (464)
T ss_pred             hhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhhe-------eccCCCCcceeccCCccceeEEcc
Confidence            5443        3566677788888999999999999999987553322       248899999999999999999999


Q ss_pred             cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        156 FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       156 ~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                      .|..|++ |.++...+.++.+|...|..+.|+|++++|++++.|..++++|+++.+.+..+++       |+..|++++|
T Consensus       242 kDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~-------Hkkdv~~~~W  314 (464)
T KOG0284|consen  242 KDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG-------HKKDVTSLTW  314 (464)
T ss_pred             CCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-------chhhheeecc
Confidence            9999999 8888888888889999999999999999999999999999999998888888777       8999999999


Q ss_pred             cCC-CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        235 SHD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       235 ~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|- ..+|.+|+.||.|..|.+.....           ....-.+|...|.+++|+|-|.+|++|+.|.+     +++|
T Consensus       315 hP~~~~lftsgg~Dgsvvh~~v~~~~p-----------~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t-----~rfw  377 (464)
T KOG0284|consen  315 HPLNESLFTSGGSDGSVVHWVVGLEEP-----------LGEIPPAHDGEIWSLAYHPLGHILATGSNDRT-----VRFW  377 (464)
T ss_pred             ccccccceeeccCCCceEEEecccccc-----------ccCCCcccccceeeeeccccceeEeecCCCcc-----eeee
Confidence            995 56888999999999999873321           22233479999999999999999999976666     9998

>KOG0286|consensus

Probab=100.00  E-value=4.6e-37  Score=225.52  Aligned_cols=242  Identities=21%  Similarity=0.264  Sum_probs=207.5

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCc
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      ..++|+||.+.|.++.|+++      .++|+++|.||.+.|||.-+....        =++.++++|.+++++.|+-|+.
T Consensus        47 ~rr~LkGH~~Ki~~~~ws~D------sr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~  120 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWSTD------SRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNK  120 (343)
T ss_pred             eEEEecccccceeeeEecCC------cCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCce
Confidence            34899999999999999999      999999999999999998877652        2445667899999999999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC-C
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-D  188 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~  188 (312)
                      ..||++.+.+..-. ......+.+|.+.+.++.|-+ ...|++++.|.+..+ |+++.+....+.+|.+.|.+++++| +
T Consensus       121 Csiy~ls~~d~~g~-~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~  198 (343)
T KOG0286|consen  121 CSIYPLSTRDAEGN-VRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSD  198 (343)
T ss_pred             eEEEeccccccccc-ceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCC
Confidence            99999986522211 112234569999999999987 556889999999888 9999999999999999999999999 9


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      ++.+++|+.|+..++||++.....+.+.+       |+..|++++|.|+|.-+++|++|++.++||++...         
T Consensus       199 ~ntFvSg~cD~~aklWD~R~~~c~qtF~g-------hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~---------  262 (343)
T KOG0286|consen  199 GNTFVSGGCDKSAKLWDVRSGQCVQTFEG-------HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQ---------  262 (343)
T ss_pred             CCeEEecccccceeeeeccCcceeEeecc-------cccccceEEEccCCCeeeecCCCceeEEEeecCCc---------
Confidence            99999999999999999999999999988       99999999999999999999999999999999874         


Q ss_pred             ccceeEEee--ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        269 LWPEVQKLY--GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       269 ~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                         .+..+.  .-..+|++++||..|++|.+|.     .|..+.+|
T Consensus       263 ---~~a~ys~~~~~~gitSv~FS~SGRlLfagy-----~d~~c~vW  300 (343)
T KOG0286|consen  263 ---ELAVYSHDSIICGITSVAFSKSGRLLFAGY-----DDFTCNVW  300 (343)
T ss_pred             ---EEeeeccCcccCCceeEEEcccccEEEeee-----cCCceeEe
Confidence               333333  2345799999999999999994     44559998

>KOG0315|consensus

Probab=100.00  E-value=1.4e-36  Score=218.29  Aligned_cols=252  Identities=19%  Similarity=0.261  Sum_probs=205.9

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEE------------------eCCCC--ceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKW------------------NGEGG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w------------------~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      +.|...+|++..+++...+.|+.+..                  |..++  .++.++.+|.+.|+++.|..+      |+
T Consensus        23 RfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~d------gr   96 (311)
T KOG0315|consen   23 RFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCD------GR   96 (311)
T ss_pred             eeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeec------Ce
Confidence            57999999999999988889999984                  43333  468899999999999999999      99


Q ss_pred             eEEEecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                      .++|||.||+++|||++...+..       +...-.+|+...|++|..+|.|++||+........      .++....+|
T Consensus        97 WMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~------liPe~~~~i  170 (311)
T KOG0315|consen   97 WMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHE------LIPEDDTSI  170 (311)
T ss_pred             EEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccc------cCCCCCcce
Confidence            99999999999999999866532       22333467777899999999999999987432221      123455789


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-ecccC------ceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC-Ce
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTW------KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS-GR  211 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~  211 (312)
                      .++...|+|..++++...|..++ ++-+.      .++..++.|++.+..+.+|||+++|++++.|.+++||+..+. +.
T Consensus       171 ~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kl  250 (311)
T KOG0315|consen  171 QSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKL  250 (311)
T ss_pred             eeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceee
Confidence            99999999999999999999999 22211      233445689999999999999999999999999999999987 33


Q ss_pred             EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                      ...+.+       |...+...+||.||+||++|+.|+.+++|++..++            .++...+|.....+++.+
T Consensus       251 e~~l~g-------h~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k------------~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  251 ELVLTG-------HQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK------------EVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             EEEeec-------CCceEEeeeeccCccEEEecCCCCceeecccccCc------------eeeecCCcccccEEEEee
Confidence            333343       88899999999999999999999999999999884            677888888877777653

>KOG0295|consensus

Probab=100.00  E-value=2e-37  Score=233.69  Aligned_cols=244  Identities=23%  Similarity=0.319  Sum_probs=212.7

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc-c--------cccccccCCCCCceE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG-N--------YLPYHMRDDSKQLHL  102 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~-~--------~~~~~~~~~~~~~~l  102 (312)
                      |+..++++.+.++||.+.|..++|...      |++|++++.|-.+++||.++.. +        ..+....+-|.+.++
T Consensus       135 ~D~~tg~~e~~LrGHt~sv~di~~~a~------Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~i  208 (406)
T KOG0295|consen  135 FDTETGELERSLRGHTDSVFDISFDAS------GKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHI  208 (406)
T ss_pred             EEccchhhhhhhhccccceeEEEEecC------ccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCee
Confidence            888999999999999999999999998      9999999999999999987632 1        233333344556799


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~  181 (312)
                      ++++.|.+|+.|++.+  +.++.+++     +|..-|..++.+.||..+++++.|..+++ -..+.+....++.|.-+|.
T Consensus       209 lS~srD~tik~We~~t--g~cv~t~~-----~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vE  281 (406)
T KOG0295|consen  209 LSCSRDNTIKAWECDT--GYCVKTFP-----GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVE  281 (406)
T ss_pred             eecccccceeEEeccc--ceeEEecc-----CchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceE
Confidence            9999999999999998  55555554     88889999999999999999999999999 4444445556778999999


Q ss_pred             EEEECCC---------------CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        182 QLAFSPD---------------DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       182 ~~~~~~~---------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      +++|.|.               +.++.+++.|++|++||+.++..+..+.+       |...|.+++|+|.|+||+++.+
T Consensus       282 ci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-------hdnwVr~~af~p~Gkyi~ScaD  354 (406)
T KOG0295|consen  282 CIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-------HDNWVRGVAFSPGGKYILSCAD  354 (406)
T ss_pred             EEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-------ccceeeeeEEcCCCeEEEEEec
Confidence            9999873               25899999999999999999999998888       9999999999999999999999


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+++++||+....            ++..+..|..-|++++|+.+..+++||+-|.+     +++|
T Consensus       355 Dktlrvwdl~~~~------------cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt-----~Kvw  403 (406)
T KOG0295|consen  355 DKTLRVWDLKNLQ------------CMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQT-----VKVW  403 (406)
T ss_pred             CCcEEEEEeccce------------eeeccCCCcceeEEEecCCCCceEEeccccce-----eeee
Confidence            9999999998874            78888999999999999999999999976666     9998

>KOG0279|consensus

Probab=100.00  E-value=2.8e-36  Score=219.98  Aligned_cols=234  Identities=23%  Similarity=0.286  Sum_probs=193.8

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~  103 (312)
                      ..+..++++|++.|+.++..+.     +...++++++|.++.+|++.....             ..+.-...++++.+++
T Consensus         5 l~l~~tl~gh~d~Vt~la~~~~-----~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~al   79 (315)
T KOG0279|consen    5 LVLRGTLEGHTDWVTALAIKIK-----NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFAL   79 (315)
T ss_pred             heeeeeecCCCceEEEEEeecC-----CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEE
Confidence            3456789999999999999886     345899999999999999876543             1223333467889999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec------ccC
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP------CHQ  177 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~------~~~  177 (312)
                      +++.|+++++||+.+++  ....+     .+|...|.+++|+++.+.+++|+.|.++++    |+.+....      .+.
T Consensus        80 S~swD~~lrlWDl~~g~--~t~~f-----~GH~~dVlsva~s~dn~qivSGSrDkTikl----wnt~g~ck~t~~~~~~~  148 (315)
T KOG0279|consen   80 SASWDGTLRLWDLATGE--STRRF-----VGHTKDVLSVAFSTDNRQIVSGSRDKTIKL----WNTLGVCKYTIHEDSHR  148 (315)
T ss_pred             eccccceEEEEEecCCc--EEEEE-----EecCCceEEEEecCCCceeecCCCcceeee----eeecccEEEEEecCCCc
Confidence            99999999999999853  22333     389999999999999999999999999999    77655433      337


Q ss_pred             CceeEEEECCC--CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        178 LTITQLAFSPD--DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       178 ~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      +.|.++.|+|+  ..+|++++.|+++++||+++.+....+.+       |.+.++.+++||||.++++|+.||.+.+||+
T Consensus       149 ~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-------h~~~v~t~~vSpDGslcasGgkdg~~~LwdL  221 (315)
T KOG0279|consen  149 EWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIG-------HSGYVNTVTVSPDGSLCASGGKDGEAMLWDL  221 (315)
T ss_pred             CcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccc-------ccccEEEEEECCCCCEEecCCCCceEEEEEc
Confidence            89999999997  67999999999999999998877776666       8899999999999999999999999999999


Q ss_pred             CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.+.            .++.+ +|...|.+++|+|+...|+.+.      +-+|+||
T Consensus       222 ~~~k------------~lysl-~a~~~v~sl~fspnrywL~~at------~~sIkIw  259 (315)
T KOG0279|consen  222 NEGK------------NLYSL-EAFDIVNSLCFSPNRYWLCAAT------ATSIKIW  259 (315)
T ss_pred             cCCc------------eeEec-cCCCeEeeEEecCCceeEeecc------CCceEEE
Confidence            9884            44444 5788999999999977766652      2339998

>KOG0315|consensus

Probab=100.00  E-value=4.6e-36  Score=215.61  Aligned_cols=245  Identities=17%  Similarity=0.215  Sum_probs=203.6

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~  101 (312)
                      |-..+|.+.++++-....|+.++..|+      ++.||+++. ..|++||+++...          ..+....+..++..
T Consensus        25 Wqa~tG~C~rTiqh~dsqVNrLeiTpd------k~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrW   97 (311)
T KOG0315|consen   25 WQALTGICSRTIQHPDSQVNRLEITPD------KKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRW   97 (311)
T ss_pred             eehhcCeEEEEEecCccceeeEEEcCC------cchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeE
Confidence            999999999999988889999999999      888888875 5799999998776          24555667788899


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec------c
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP------C  175 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~------~  175 (312)
                      +++|+.||+++|||++.....  ..      ..+..+|+++..+|+...|++|..+|.|++    |++.....      .
T Consensus        98 MyTgseDgt~kIWdlR~~~~q--R~------~~~~spVn~vvlhpnQteLis~dqsg~irv----WDl~~~~c~~~liPe  165 (311)
T KOG0315|consen   98 MYTGSEDGTVKIWDLRSLSCQ--RN------YQHNSPVNTVVLHPNQTELISGDQSGNIRV----WDLGENSCTHELIPE  165 (311)
T ss_pred             EEecCCCceEEEEeccCcccc--hh------ccCCCCcceEEecCCcceEEeecCCCcEEE----EEccCCccccccCCC
Confidence            999999999999999973322  11      246689999999999999999999999999    76655422      3


Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      -...|.++...|||.+++.+...|..++|++-+......+.... +...|.+.+..+.+||++++||+++.|.+++||+.
T Consensus       166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~-k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~  244 (311)
T KOG0315|consen  166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVH-KFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNT  244 (311)
T ss_pred             CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhh-heecccceEEEEEECCCCcEEEeecCCceEEEEec
Confidence            45679999999999999999999999999998754443333322 23338899999999999999999999999999998


Q ss_pred             CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..-           +.-..+.+|...+.+.+||.||+||+||+.|..     +++|
T Consensus       245 ~~~~-----------kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~-----~rlW  285 (311)
T KOG0315|consen  245 DDFF-----------KLELVLTGHQRWVWDCAFSADGEYLVTASSDHT-----ARLW  285 (311)
T ss_pred             CCce-----------eeEEEeecCCceEEeeeeccCccEEEecCCCCc-----eeec
Confidence            7751           245678899999999999999999999965555     9998

>KOG0265|consensus

Probab=100.00  E-value=7.1e-36  Score=220.03  Aligned_cols=263  Identities=19%  Similarity=0.279  Sum_probs=213.8

Q ss_pred             eEEEEeccCCCceEEEEEeCCC--------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGEG--------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD   74 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~~--------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d   74 (312)
                      .++..+.+|++.|+.+.|+|++                    .+-...+++|.++|..+.|.++      ++.+++++.|
T Consensus        38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d------~s~i~S~gtD  111 (338)
T KOG0265|consen   38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRD------GSHILSCGTD  111 (338)
T ss_pred             chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccC------CCEEEEecCC
Confidence            3556688999999999998854                    1334578899999999999999      9999999999


Q ss_pred             CcEEEeeecCCcccc--------cccc-cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         75 KTAILWKYVSEGNYL--------PYHM-RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        75 g~i~vw~~~~~~~~~--------~~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      .+|+.||.++++...        +..+ +......++.+++.|+++++||+++.+..  .++      ....+++++.|.
T Consensus       112 k~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~--~t~------~~kyqltAv~f~  183 (338)
T KOG0265|consen  112 KTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI--KTF------ENKYQLTAVGFK  183 (338)
T ss_pred             ceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchh--hcc------ccceeEEEEEec
Confidence            999999999998721        1111 22233447888999999999999974322  221      234668999999


Q ss_pred             CCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC----eEEEEeccCC
Q psy15191        146 PRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG----RLSLVACSDK  220 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~  220 (312)
                      .++..+.+|+-|+.|++ |++..+....+.+|.++|+.|..+|+|.++.+-+.|.++++||++...    .+..+.+...
T Consensus       184 d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~h  263 (338)
T KOG0265|consen  184 DTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIH  263 (338)
T ss_pred             ccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchh
Confidence            99999999999999999 776667777888999999999999999999999999999999998632    2444444322


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      .   .+.....++|+|++..+.+|+.|..+++||.....            .+..+.||.+.|+.++|+|...+|.+++.
T Consensus       264 n---feknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~------------~lyklpGh~gsvn~~~Fhp~e~iils~~s  328 (338)
T KOG0265|consen  264 N---FEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRR------------ILYKLPGHYGSVNEVDFHPTEPIILSCSS  328 (338)
T ss_pred             h---hhhhcceeeccCCCCccccccccceEEEeeccccc------------EEEEcCCcceeEEEeeecCCCcEEEEecc
Confidence            1   23345578999999999999999999999987753            79999999999999999999999999987


Q ss_pred             CCCcccceEEe
Q psy15191        301 ATKPEHAAIII  311 (312)
Q Consensus       301 d~~~~dg~i~i  311 (312)
                      |.+     |++
T Consensus       329 dk~-----i~l  334 (338)
T KOG0265|consen  329 DKT-----IYL  334 (338)
T ss_pred             Cce-----eEe
Confidence            777     764

>KOG0273|consensus

Probab=100.00  E-value=9.3e-36  Score=231.71  Aligned_cols=246  Identities=22%  Similarity=0.355  Sum_probs=203.8

Q ss_pred             CceEEEEEeCCC------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191         25 SKVMAVKWNGEG------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG   86 (312)
Q Consensus        25 ~~v~~~~w~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~   86 (312)
                      ..|++++|+.++                  |.++.+|..|.++|.++.|+..      |++|++++.|+++.+||..++.
T Consensus       236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~------G~yilS~~vD~ttilwd~~~g~  309 (524)
T KOG0273|consen  236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKK------GTYILSGGVDGTTILWDAHTGT  309 (524)
T ss_pred             CCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCC------CCEEEeccCCccEEEEeccCce
Confidence            578888888654                  5566778889999999999999      9999999999999999998887


Q ss_pred             ccccccccCCC-------CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe
Q psy15191         87 NYLPYHMRDDS-------KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS  159 (312)
Q Consensus        87 ~~~~~~~~~~~-------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~  159 (312)
                      ....+..+..+       +...+++++.|+.|+++.+....       +...+.+|..+|.++.|+|.+.+|++++.|++
T Consensus       310 ~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~-------P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~T  382 (524)
T KOG0273|consen  310 VKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDR-------PVKTFIGHHGEVNALKWNPTGSLLASCSDDGT  382 (524)
T ss_pred             EEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCC-------cceeeecccCceEEEEECCCCceEEEecCCCe
Confidence            64333332222       33479999999999999887533       33444589999999999999999999999999


Q ss_pred             EEE-ecccCceeeeecccCCceeEEEECCCC---------CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191        160 LHL-DVTTWKQIQTLPCHQLTITQLAFSPDD---------THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII  229 (312)
Q Consensus       160 i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v  229 (312)
                      ++| ..........+.+|...|..+.|+|.|         ..+++++.|++|++||+..+.++..+..       |..+|
T Consensus       383 lkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k-------H~~pV  455 (524)
T KOG0273|consen  383 LKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK-------HQEPV  455 (524)
T ss_pred             eEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc-------CCCce
Confidence            999 333334555677999999999999954         5799999999999999999999988765       99999


Q ss_pred             EEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        230 WGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       230 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ++++|+|+|+|+|+|+.||.|.+|++..+.            .++.+. -.+.|..++|+.+|.+|..+-.|+.
T Consensus       456 ysvafS~~g~ylAsGs~dg~V~iws~~~~~------------l~~s~~-~~~~Ifel~Wn~~G~kl~~~~sd~~  516 (524)
T KOG0273|consen  456 YSVAFSPNGRYLASGSLDGCVHIWSTKTGK------------LVKSYQ-GTGGIFELCWNAAGDKLGACASDGS  516 (524)
T ss_pred             EEEEecCCCcEEEecCCCCeeEeccccchh------------eeEeec-CCCeEEEEEEcCCCCEEEEEecCCC
Confidence            999999999999999999999999998873            344444 4566999999999999998844443

>KOG0645|consensus

Probab=100.00  E-value=7.6e-35  Score=211.73  Aligned_cols=263  Identities=23%  Similarity=0.382  Sum_probs=210.1

Q ss_pred             eEEEEeccCCCceEEEEEeCCCCce-----------------------EEEE-ccccCcEEEEEEecCcCcCCCCceEEE
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGEGGKV-----------------------LYTL-TNHKSKVMAVKWVLNTSLDPEHKDLVS   70 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~~~~~-----------------------~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s   70 (312)
                      -.+..+++|++++..++|+|..|..                       ...+ .+|+..|.+++|+|.      |++|++
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~------g~~La~   78 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPH------GRYLAS   78 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCC------CcEEEE
Confidence            3566788888888888888864322                       1222 258999999999999      999999


Q ss_pred             ecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcc-eeeeeeeecccCCCccce
Q psy15191         71 CSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG-LWLETARVGEVGGNTLGF  139 (312)
Q Consensus        71 ~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~v  139 (312)
                      ||.|.++.||.-..++.          ..+.+..++++|.+|++|++|+.|.||.+..... .+.     ..+.+|...|
T Consensus        79 aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~-----aVL~~HtqDV  153 (312)
T KOG0645|consen   79 ASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECI-----AVLQEHTQDV  153 (312)
T ss_pred             eeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEE-----eeeccccccc
Confidence            99999999998664432          4566777889999999999999999999884322 222     2335889999


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE----ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL----DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~----d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  215 (312)
                      ..+.|+|...+|++++.|.+|++    |-..|.+...+.+|...|.+++|+|.|..|++++.|++++||...+.     +
T Consensus       154 K~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----~  228 (312)
T KOG0645|consen  154 KHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----L  228 (312)
T ss_pred             cEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----c
Confidence            99999999999999999999999    35689999999999999999999999999999999999999997621     1


Q ss_pred             eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE-EeeccCcceeEEEeccC-CC
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYGHGYEIYSLAASHD-GT  293 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~-~~  293 (312)
                      ...      |+..++.++|.  ...|++++.|+.|++|.-.....      ...|+.+. .-..|+..|++++|+|. ..
T Consensus       229 ~~~------~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d------~p~~~l~~~~~~aHe~dVNsV~w~p~~~~  294 (312)
T KOG0645|consen  229 SGM------HSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPD------EPSWNLLAKKEGAHEVDVNSVQWNPKVSN  294 (312)
T ss_pred             chh------cccceEeeeec--ccceEeccCCCEEEEEEecCCCC------CchHHHHHhhhcccccccceEEEcCCCCC
Confidence            111      78889999998  56899999999999997764322      22333333 34469999999999995 68


Q ss_pred             eEEEEecCCCcccceEEeC
Q psy15191        294 LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       294 ~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|++|+     +||.|++|
T Consensus       295 ~L~s~~-----DDG~v~~W  308 (312)
T KOG0645|consen  295 RLASGG-----DDGIVNFW  308 (312)
T ss_pred             ceeecC-----CCceEEEE
Confidence            899994     55559998

>KOG0296|consensus

Probab=100.00  E-value=2e-35  Score=222.96  Aligned_cols=260  Identities=18%  Similarity=0.250  Sum_probs=214.1

Q ss_pred             CeEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191         14 GKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD   74 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d   74 (312)
                      ...+.++..|+..|++++                   |+..++..+..+.+|...|+++.|+.+      |.+||||+.+
T Consensus        54 DdS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshd------gtlLATGdms  127 (399)
T KOG0296|consen   54 DDSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHD------GTLLATGDMS  127 (399)
T ss_pred             ccceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccC------ceEEEecCCC
Confidence            445778999999999998                   666778888999999999999999999      9999999999


Q ss_pred             CcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC
Q psy15191         75 KTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP  146 (312)
Q Consensus        75 g~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  146 (312)
                      |.|+||...++..        -.+.|+.++|....|++|+.||.+.+|.+...  .     ....+.+|..++++-.|.|
T Consensus       128 G~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~--~-----~~kv~~Gh~~~ct~G~f~p  200 (399)
T KOG0296|consen  128 GKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ--A-----LCKVMSGHNSPCTCGEFIP  200 (399)
T ss_pred             ccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc--c-----eeeEecCCCCCcccccccC
Confidence            9999999988765        35678889999999999999999999999873  1     1223358999999999999


Q ss_pred             CCCeEEEeecCCeEEE-ecccCceeeeec---------------------------------------------------
Q psy15191        147 RGDYIIAHGFQGSLHL-DVTTWKQIQTLP---------------------------------------------------  174 (312)
Q Consensus       147 ~~~~l~~~~~~~~i~~-d~~~~~~~~~~~---------------------------------------------------  174 (312)
                      +|+.++++..||.|++ ++++..+.....                                                   
T Consensus       201 dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~  280 (399)
T KOG0296|consen  201 DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKP  280 (399)
T ss_pred             CCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccc
Confidence            9999999999999999 666665544332                                                   


Q ss_pred             ccCCceeEEE---ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191        175 CHQLTITQLA---FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV  251 (312)
Q Consensus       175 ~~~~~v~~~~---~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  251 (312)
                      .+...+.++.   ++..-.+.|+|+.||+|.|||+..........        |..+|+.+.|-+ ..+|++++.+|.|+
T Consensus       281 ~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~--------he~~V~~l~w~~-t~~l~t~c~~g~v~  351 (399)
T KOG0296|consen  281 SQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE--------HEDGVTKLKWLN-TDYLLTACANGKVR  351 (399)
T ss_pred             cchhhhhhhhhcccccccchhhcccccceEEEEecccchhheecc--------CCCceEEEEEcC-cchheeeccCceEE
Confidence            0111112222   33344577889999999999998766544444        888899999998 88999999999999


Q ss_pred             EEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        252 VWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       252 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +||.+++.            +...+.||...|.+++.+|++++++|+|.|++     .+|+
T Consensus       352 ~wDaRtG~------------l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~-----a~VF  395 (399)
T KOG0296|consen  352 QWDARTGQ------------LKFTYTGHQMGILDFALSPQKRLVVTVSDDNT-----ALVF  395 (399)
T ss_pred             eeeccccc------------eEEEEecCchheeEEEEcCCCcEEEEecCCCe-----EEEE
Confidence            99999984            78899999999999999999999999966655     7664

>KOG0273|consensus

Probab=100.00  E-value=2.9e-35  Score=228.99  Aligned_cols=256  Identities=21%  Similarity=0.335  Sum_probs=208.5

Q ss_pred             EEeccCCCceEEEEEeCCCC-----------ceEEEEcc-----------------------ccCcEEEEEEecCcCcCC
Q psy15191         18 YTLTNHKSKVMAVKWNGEGG-----------KVLYTLTN-----------------------HKSKVMAVKWVLNTSLDP   63 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~-----------~~~~~~~~-----------------------h~~~v~~~~~~~~~~~~~   63 (312)
                      ..++ |+.+|.+.+|+|...           ..+..+..                       -+..|++++|+.+     
T Consensus       173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~-----  246 (524)
T KOG0273|consen  173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND-----  246 (524)
T ss_pred             eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC-----
Confidence            3344 999999999998542           11111211                       1357999999999     


Q ss_pred             CCceEEEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                       |..||+|+.||.+++|+......       -.++.+.+...+.+|++++.|+++.+||..+++.  ...+.     -|.
T Consensus       247 -G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~--~q~f~-----~~s  318 (524)
T KOG0273|consen  247 -GTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV--KQQFE-----FHS  318 (524)
T ss_pred             -CCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceE--EEeee-----ecc
Confidence             99999999999999999876544       3566777888999999999999999999988443  33333     344


Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  215 (312)
                      .+...+.|-. ...+++++.|+.|++ .+..-.+..++.+|.+.|..|.|+|.+.+|++++.|++++||.+........+
T Consensus       319 ~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l  397 (524)
T KOG0273|consen  319 APALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDL  397 (524)
T ss_pred             CCccceEEec-CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhh
Confidence            4446677754 445888999999999 66666778888899999999999999999999999999999998877666655


Q ss_pred             eccCCCCcccceeeEEEEEcCCC---------ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDS---------RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL  286 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  286 (312)
                      ..       |...|..+.|+|.|         ..+++++.|+.|++||+..+.            ++..+..|..+|+++
T Consensus       398 ~~-------Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv------------~i~~f~kH~~pVysv  458 (524)
T KOG0273|consen  398 QA-------HSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV------------PIHTLMKHQEPVYSV  458 (524)
T ss_pred             hh-------hccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc------------eeEeeccCCCceEEE
Confidence            55       88889999999955         478999999999999999884            788999999999999


Q ss_pred             EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        287 AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       287 ~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|+|+|++||+|+     -||+|.+|
T Consensus       459 afS~~g~ylAsGs-----~dg~V~iw  479 (524)
T KOG0273|consen  459 AFSPNGRYLASGS-----LDGCVHIW  479 (524)
T ss_pred             EecCCCcEEEecC-----CCCeeEec
Confidence            9999999999995     55559998

>KOG0263|consensus

Probab=100.00  E-value=1.7e-35  Score=243.63  Aligned_cols=247  Identities=19%  Similarity=0.281  Sum_probs=205.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~  103 (312)
                      .+.++....+++-||.++|..+.|+|+      .++|++||.|+++|+|.+.+..+        ..+....+.|.|.+++
T Consensus       436 ~D~~~~~~~~~L~GH~GPVyg~sFsPd------~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFa  509 (707)
T KOG0263|consen  436 LDDDSSGTSRTLYGHSGPVYGCSFSPD------RRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFA  509 (707)
T ss_pred             ccccCCceeEEeecCCCceeeeeeccc------ccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEE
Confidence            344445667789999999999999999      89999999999999999988766        2344455678899999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.|++-++|......       +...+.+|...|.|+.|+|+..++++|+.|.++++ |..++..++.+.+|.++|.+
T Consensus       510 tas~D~tArLWs~d~~~-------PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~a  582 (707)
T KOG0263|consen  510 TASHDQTARLWSTDHNK-------PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTA  582 (707)
T ss_pred             ecCCCceeeeeecccCC-------chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEE
Confidence            99999999999987622       33344589999999999999999999999999999 88888899999999999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      ++|+|+|++|++|+.||.|.+||+.++..+..+.+       |.+.|.++.|+.+|..||+|+.|+.|++||+.......
T Consensus       583 l~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-------Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~  655 (707)
T KOG0263|consen  583 LAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG-------HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELL  655 (707)
T ss_pred             EEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc-------ccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccc
Confidence            99999999999999999999999999888877776       88899999999999999999999999999987654330


Q ss_pred             ccc------------cccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        263 DLV------------QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       263 ~~~------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ...            ....-..+..+.....+|..+.|....-.|+.|
T Consensus       656 ~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g  703 (707)
T KOG0263|consen  656 NLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG  703 (707)
T ss_pred             cccccccccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence            000            000111566666777899999998776555554

>KOG0318|consensus

Probab=100.00  E-value=9.2e-34  Score=223.53  Aligned_cols=276  Identities=23%  Similarity=0.298  Sum_probs=211.8

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEc---cccCcEEEEEEecCcCcCCCC
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLT---NHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      ++..+.-|.-.+++.|+.-|+|+.|+|++                   |+.+..|.   +|.+.|.+++|+|+      +
T Consensus       174 ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPD------s  247 (603)
T KOG0318|consen  174 FFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPD------S  247 (603)
T ss_pred             EeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCC------C
Confidence            34455566667788899999999988875                   56667777   89999999999999      9


Q ss_pred             ceEEEecCCCcEEEeeecCCccc---------------------------------------------------cccccc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY---------------------------------------------------LPYHMR   94 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~---------------------------------------------------~~~~~~   94 (312)
                      +.++|++.|.+++|||+.+..+.                                                   .+..+.
T Consensus       248 ~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLt  327 (603)
T KOG0318|consen  248 TQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALT  327 (603)
T ss_pred             ceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEE
Confidence            99999999999999999876541                                                   333444


Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceee---------e-----------------eeeec-------------cc---
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWL---------E-----------------TARVG-------------EV---  132 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---------~-----------------~~~~~-------------~~---  132 (312)
                      .++++.+|++|+.||.|.-|+..++....+         .                 +++..             .+   
T Consensus       328 v~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~Q  407 (603)
T KOG0318|consen  328 VSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQ  407 (603)
T ss_pred             EcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCC
Confidence            467778999999999999999876432211         0                 00000             00   


Q ss_pred             --------------------------------CCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce--eeeecccC
Q psy15191        133 --------------------------------GGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ--IQTLPCHQ  177 (312)
Q Consensus       133 --------------------------------~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~--~~~~~~~~  177 (312)
                                                      ..-.....+++++|+++.+++|+.|+.+++ .+....+  ...+..|.
T Consensus       408 P~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~  487 (603)
T KOG0318|consen  408 PKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHR  487 (603)
T ss_pred             ceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeeccc
Confidence                                            001123457899999999999999999999 3333222  22344799


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ++|++++++||+.+|+++...+.+.+||..+.+.....-      ..|...|.+++|+|+..++|+|+.|..|.||++..
T Consensus       488 a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w------~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~k  561 (603)
T KOG0318|consen  488 AAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRW------AFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKK  561 (603)
T ss_pred             CCceEEEECCCCcEEEEeccCCcEEEEEcccCceeccee------eeeeeeEEEEEeCCCceEEEeccccceEEEEEccC
Confidence            999999999999999999999999999998766522111      11899999999999999999999999999999988


Q ss_pred             CCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        258 PPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..           .+....+|...|+.+.|- +...|++.     ++|.+|++|
T Consensus       562 P~~-----------~i~iknAH~~gVn~v~wl-de~tvvSs-----G~Da~iK~W  599 (603)
T KOG0318|consen  562 PAK-----------HIIIKNAHLGGVNSVAWL-DESTVVSS-----GQDANIKVW  599 (603)
T ss_pred             hhh-----------heEeccccccCceeEEEe-cCceEEec-----cCcceeEEe
Confidence            753           344556798889999996 55678888     567779999

>KOG0285|consensus

Probab=100.00  E-value=5e-35  Score=220.60  Aligned_cols=237  Identities=20%  Similarity=0.335  Sum_probs=204.4

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      .++.+.+++|.+.|.|+++-|.      +.+|+||+.|++|+|||+.+++..        .+.-...++.-.++++++.|
T Consensus       141 wKl~rVi~gHlgWVr~vavdP~------n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ged  214 (460)
T KOG0285|consen  141 WKLYRVISGHLGWVRSVAVDPG------NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGED  214 (460)
T ss_pred             ceehhhhhhccceEEEEeeCCC------ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCC
Confidence            4667889999999999999998      889999999999999999998862        11112223333499999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      +.|+.||++..+       .+..+.+|-..|++++.+|.-..|++|+.|..+++ |+++...+..+.+|..+|.++.+.|
T Consensus       215 k~VKCwDLe~nk-------vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~  287 (460)
T KOG0285|consen  215 KQVKCWDLEYNK-------VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQP  287 (460)
T ss_pred             CeeEEEechhhh-------hHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeec
Confidence            999999998743       22344589999999999999999999999999999 8888788888889999999999999


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      -...+++|+.|++|++||++.++....+..       |...|.+++.+|....+|+++.|+ |+-|++..+.        
T Consensus       288 ~dpqvit~S~D~tvrlWDl~agkt~~tlt~-------hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~--------  351 (460)
T KOG0285|consen  288 TDPQVITGSHDSTVRLWDLRAGKTMITLTH-------HKKSVRALCLHPKENLFASASPDN-IKQWKLPEGE--------  351 (460)
T ss_pred             CCCceEEecCCceEEEeeeccCceeEeeec-------ccceeeEEecCCchhhhhccCCcc-ceeccCCccc--------
Confidence            777899999999999999999988877776       888999999999999999999987 9999998874        


Q ss_pred             cccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          .+..+.+|...|++++.+.|| ++++|     +++|.|.+|
T Consensus       352 ----f~~nlsgh~~iintl~~nsD~-v~~~G-----~dng~~~fw  386 (460)
T KOG0285|consen  352 ----FLQNLSGHNAIINTLSVNSDG-VLVSG-----GDNGSIMFW  386 (460)
T ss_pred             ----hhhccccccceeeeeeeccCc-eEEEc-----CCceEEEEE
Confidence                567789999999999998886 67888     667779888

>KOG0319|consensus

Probab=100.00  E-value=4.1e-34  Score=233.73  Aligned_cols=275  Identities=14%  Similarity=0.223  Sum_probs=219.4

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEE-eCCC------------------CceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKW-NGEG------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w-~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      +++.++.+....+-|..+.|..+.| .++.                  +-.-..+.||...|.++....+      |.+|
T Consensus       307 l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~------g~ll  380 (775)
T KOG0319|consen  307 LYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSS------GDLL  380 (775)
T ss_pred             EEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeeccc------CcEE
Confidence            4455677777777777777777662 2211                  1112367899999999995555      7799


Q ss_pred             EEecCCCcEEEeeecCCccc------------ccccccC-CCCCceEEEEeCCCcEEEEcCCCCcceee--eeeeecccC
Q psy15191         69 VSCSLDKTAILWKYVSEGNY------------LPYHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWL--ETARVGEVG  133 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~~------------~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~  133 (312)
                      +||+.|.++++|.++++...            .+..... ......|++++.|+++++|++...+....  .........
T Consensus       381 at~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~  460 (775)
T KOG0319|consen  381 ATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTER  460 (775)
T ss_pred             EEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHH
Confidence            99999999999998554331            1111111 11223899999999999999986322111  000111234


Q ss_pred             CCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE
Q psy15191        134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL  212 (312)
Q Consensus       134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  212 (312)
                      .|...|++++.+|+.+++++|+.|...++ +++...+...+.+|+..|.++.|+|..+.++|+|.|++|+||.+.+...+
T Consensus       461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSCl  540 (775)
T KOG0319|consen  461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCL  540 (775)
T ss_pred             hhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceee
Confidence            68899999999999999999999999999 66666677788899999999999999999999999999999999999999


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                      ..+.+       |...|..+.|-.+++.|++++.||-|++|++.+..            +..++.+|...|.+++-+|.+
T Consensus       541 kT~eG-------H~~aVlra~F~~~~~qliS~~adGliKlWnikt~e------------C~~tlD~H~DrvWaL~~~~~~  601 (775)
T KOG0319|consen  541 KTFEG-------HTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE------------CEMTLDAHNDRVWALSVSPLL  601 (775)
T ss_pred             eeecC-------ccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh------------hhhhhhhccceeEEEeecCcc
Confidence            99998       99999999999999999999999999999999874            889999999999999999999


Q ss_pred             CeEEEEecCCCcccceEEeC
Q psy15191        293 TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       293 ~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+++||+.     ||.|.+|
T Consensus       602 ~~~~tgg~-----Dg~i~~w  616 (775)
T KOG0319|consen  602 DMFVTGGG-----DGRIIFW  616 (775)
T ss_pred             ceeEecCC-----CeEEEEe
Confidence            99999954     5559998

>KOG0282|consensus

Probab=100.00  E-value=9.2e-35  Score=226.84  Aligned_cols=246  Identities=19%  Similarity=0.234  Sum_probs=200.5

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-Cccc--------ccccccCCCCCceEEEEeC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-EGNY--------LPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-~~~~--------~~~~~~~~~~~~~l~~~~~  107 (312)
                      .+.+.++.||+..|+++.|.|.     .+.+|++++.|+.|+||++-. +.++        .+....++.++..+++++.
T Consensus       204 kk~~~~~~gH~kgvsai~~fp~-----~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf  278 (503)
T KOG0282|consen  204 KKLSHNLSGHTKGVSAIQWFPK-----KGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASF  278 (503)
T ss_pred             HhheeeccCCccccchhhhccc-----eeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeec
Confidence            3567889999999999999993     188999999999999999987 3432        3444556888999999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAF  185 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~  185 (312)
                      |+.|++||+++  +.+...+.      ....++++.|+|++ +.+++|+.|+.|+. |+++.++++....|-+.|..+.|
T Consensus       279 D~~lKlwDtET--G~~~~~f~------~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F  350 (503)
T KOG0282|consen  279 DRFLKLWDTET--GQVLSRFH------LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITF  350 (503)
T ss_pred             ceeeeeecccc--ceEEEEEe------cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEE
Confidence            99999999999  54555544      23457899999988 78999999999998 99999999999999999999999


Q ss_pred             CCCCCEEEEEecCCeEEEEEccCCCeEE--------------------------------EEeccCCC-------Ccc--
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQSSGRLS--------------------------------LVACSDKT-------NGV--  224 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~--------------------------------~~~~~~~~-------~~~--  224 (312)
                      -++|+++++.+.|+++++|+.+..-.+.                                .+......       ...  
T Consensus       351 ~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~  430 (503)
T KOG0282|consen  351 VDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHS  430 (503)
T ss_pred             ccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhccee
Confidence            9999999999999999999988732221                                11110000       000  


Q ss_pred             cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCC
Q psy15191        225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATK  303 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~  303 (312)
                      ..+.-..+.|||||.+|++|..||.+.+||..+..            .+..+.+|.+++..+.|+|.. ..+||++.||.
T Consensus       431 vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k------------l~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~  498 (503)
T KOG0282|consen  431 VAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK------------LVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGL  498 (503)
T ss_pred             ccCceeeEEEcCCCCeEEeecCCccEEEeechhhh------------hhhccccCCcceEEEEecCCCcceeEecccCce
Confidence            23445678999999999999999999999998863            688899999999999999975 68899966666


Q ss_pred             cccceEEeC
Q psy15191        304 PEHAAIIIW  312 (312)
Q Consensus       304 ~~dg~i~iW  312 (312)
                           |++|
T Consensus       499 -----Ikiw  502 (503)
T KOG0282|consen  499 -----IKIW  502 (503)
T ss_pred             -----eEec
Confidence                 9999

>KOG0291|consensus

Probab=100.00  E-value=1.9e-33  Score=230.52  Aligned_cols=280  Identities=16%  Similarity=0.233  Sum_probs=213.0

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEe--------------------CCCCceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWN--------------------GEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD   67 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~--------------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~   67 (312)
                      ++..++-.+++.+.-...+|..+.|+                    .++...+...++|...+++++++|+      |++
T Consensus       291 LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpD------gq~  364 (893)
T KOG0291|consen  291 LYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPD------GQL  364 (893)
T ss_pred             EEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCC------CcE
Confidence            45555556666665555566666644                    4444556677899999999999999      999


Q ss_pred             EEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191         68 LVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        68 l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                      +|||+.||.|+|||...+-|.        .+....+...+..+++.+-||+|+.||+.....  ..++.    .......
T Consensus       365 iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN--fRTft----~P~p~Qf  438 (893)
T KOG0291|consen  365 IATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN--FRTFT----SPEPIQF  438 (893)
T ss_pred             EEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce--eeeec----CCCceee
Confidence            999999999999999987763        344445566778999999999999999987432  22222    1234567


Q ss_pred             eEEEECCCCCeEEEeecCCe-EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEe
Q psy15191        140 YGCKFGPRGDYIIAHGFQGS-LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVA  216 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~-i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~  216 (312)
                      .+++..|.|..+.+|+.|.- |.+ +.++++++..+.+|.++|.+++|+|++..|++++.|.+|++||+-... ....+.
T Consensus       439 scvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~  518 (893)
T KOG0291|consen  439 SCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE  518 (893)
T ss_pred             eEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe
Confidence            89999999999999988874 666 899999999999999999999999999999999999999999987543 333444


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc------ccccccc--eeEEeeccCcceeEEEe
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL------VQNTLWP--EVQKLYGHGYEIYSLAA  288 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~v~~~~~  288 (312)
                              +...+..++|+|+|+.|+++..||.|.+||+.........      ...+...  ....-.......+.+++
T Consensus       519 --------i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~y  590 (893)
T KOG0291|consen  519 --------IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICY  590 (893)
T ss_pred             --------eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEE
Confidence                    6677999999999999999999999999999876433211      1111111  11111223467899999


Q ss_pred             ccCCCeEEEEecCCCcccceEEeC
Q psy15191        289 SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       289 s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+||..|++||.     ...|+|+
T Consensus       591 SaDG~~IlAgG~-----sn~iCiY  609 (893)
T KOG0291|consen  591 SADGKCILAGGE-----SNSICIY  609 (893)
T ss_pred             cCCCCEEEecCC-----cccEEEE
Confidence            999999999954     4447764

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=5.3e-33  Score=221.57  Aligned_cols=244  Identities=32%  Similarity=0.408  Sum_probs=200.7

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |+..+++....+..|...+..+.|+|+      ++++++++.||.|++|++..++..        .+....+.+++.+++
T Consensus        36 ~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  109 (289)
T cd00200          36 WDLETGELLRTLKGHTGPVRDVAASAD------GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILS  109 (289)
T ss_pred             EEeeCCCcEEEEecCCcceeEEEECCC------CCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEE
Confidence            555556666778889999999999998      789999999999999999875431        234444556666788


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.++.+.+||+.+.+.  ....     ..|...+.+++|+|++.++++++.++.+++ |+++.+....+..|...+.+
T Consensus       110 ~~~~~~~i~~~~~~~~~~--~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~  182 (289)
T cd00200         110 SSSRDKTIKVWDVETGKC--LTTL-----RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNS  182 (289)
T ss_pred             EecCCCeEEEEECCCcEE--EEEe-----ccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccce
Confidence            888899999999986332  2222     257778999999999988888888999999 88777777778788889999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      +.|+|+++.+++++.|+.|++||++..+....+..       +...+.+++|+|++.++++++.||.|++||+..+.   
T Consensus       183 ~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~---  252 (289)
T cd00200         183 VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG-------HENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE---  252 (289)
T ss_pred             EEECCCcCEEEEecCCCcEEEEECCCCceecchhh-------cCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce---
Confidence            99999999999999999999999998766665533       66789999999999999998889999999998652   


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                               ....+..|...|.+++|+|++++|++++.     ||.|++|
T Consensus       253 ---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~iw  288 (289)
T cd00200         253 ---------CVQTLSGHTNSVTSLAWSPDGKRLASGSA-----DGTIRIW  288 (289)
T ss_pred             ---------eEEEccccCCcEEEEEECCCCCEEEEecC-----CCeEEec
Confidence                     56667789999999999999999999954     5559998

>KOG0295|consensus

Probab=100.00  E-value=5.4e-35  Score=220.62  Aligned_cols=239  Identities=21%  Similarity=0.271  Sum_probs=208.0

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      .+...+.+|..+|+.+-|+|.      -..+++++.|++|++||..+++..        .+.-..++..|.++++++.|=
T Consensus        99 ~l~~~l~g~r~~vt~v~~hp~------~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl  172 (406)
T KOG0295|consen   99 NLVQKLAGHRSSVTRVIFHPS------EALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDL  172 (406)
T ss_pred             CchhhhhccccceeeeeeccC------ceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCcc
Confidence            456677889999999999998      788999999999999999998872        344455567778999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCC
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD  188 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~  188 (312)
                      .+++||..+. ..     ......+|...|.+++|-|.|.++++++.|..|+. +..++-.+..+.+|...|..++.+.|
T Consensus       173 ~~~LWd~~~~-~~-----c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~D  246 (406)
T KOG0295|consen  173 SAKLWDFDTF-FR-----CIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQD  246 (406)
T ss_pred             chhheeHHHH-HH-----HHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCC
Confidence            9999998862 11     12233478889999999999999999999999999 77777788888999999999999999


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC---------------CCceEEEeccCCeEEEE
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH---------------DSRYFLTISRDGVCVVW  253 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~~~l~s~~~dg~i~iw  253 (312)
                      |..+++++.|.++++|-+.+.+....++.       |+.+|.+++|.|               .++++++++.|++|++|
T Consensus       247 Gti~As~s~dqtl~vW~~~t~~~k~~lR~-------hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~w  319 (406)
T KOG0295|consen  247 GTIIASCSNDQTLRVWVVATKQCKAELRE-------HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIW  319 (406)
T ss_pred             eeEEEecCCCceEEEEEeccchhhhhhhc-------cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEE
Confidence            99999999999999999998877776666       888899999987               23699999999999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+.++.            ++.++.+|...|.+++|+|.|+||+++     .+|+++++|
T Consensus       320 dv~tg~------------cL~tL~ghdnwVr~~af~p~Gkyi~Sc-----aDDktlrvw  361 (406)
T KOG0295|consen  320 DVSTGM------------CLFTLVGHDNWVRGVAFSPGGKYILSC-----ADDKTLRVW  361 (406)
T ss_pred             eccCCe------------EEEEEecccceeeeeEEcCCCeEEEEE-----ecCCcEEEE
Confidence            999984            899999999999999999999999999     566669999

>KOG0643|consensus

Probab=100.00  E-value=3.8e-34  Score=207.78  Aligned_cols=279  Identities=20%  Similarity=0.177  Sum_probs=210.5

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--   88 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--   88 (312)
                      -..|.++++..  ++.+..+ |-..+|+.+-++.||.+.|+|+...-+      .+.++||+.|.++++||.++++.+  
T Consensus        19 N~eGDLlFsca--KD~~~~v-w~s~nGerlGty~GHtGavW~~Did~~------s~~liTGSAD~t~kLWDv~tGk~la~   89 (327)
T KOG0643|consen   19 NREGDLLFSCA--KDSTPTV-WYSLNGERLGTYDGHTGAVWCCDIDWD------SKHLITGSADQTAKLWDVETGKQLAT   89 (327)
T ss_pred             cCCCcEEEEec--CCCCceE-EEecCCceeeeecCCCceEEEEEecCC------cceeeeccccceeEEEEcCCCcEEEE
Confidence            34455555543  2222223 666679999999999999999998887      889999999999999999999873  


Q ss_pred             -----ccccccCCCCCceEEEEeC-----CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC
Q psy15191         89 -----LPYHMRDDSKQLHLLSCSM-----DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG  158 (312)
Q Consensus        89 -----~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~  158 (312)
                           .+..+.++..+.+++.+..     .+.|.++|++..........+...++.+...++.+-|.|-+++|++|..+|
T Consensus        90 ~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G  169 (327)
T KOG0643|consen   90 WKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDG  169 (327)
T ss_pred             eecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCC
Confidence                 3444556677777766654     367999999865543333333444456678899999999999999999999


Q ss_pred             eEEE-ecccC-ceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC
Q psy15191        159 SLHL-DVTTW-KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH  236 (312)
Q Consensus       159 ~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  236 (312)
                      .|.. |.+++ +++...+.|...|+.|.++||..++++++.|.+-++||+++.+.+..+.        ...+|++.+++|
T Consensus       170 ~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~--------te~PvN~aaisP  241 (327)
T KOG0643|consen  170 SISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT--------TERPVNTAAISP  241 (327)
T ss_pred             cEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee--------ecccccceeccc
Confidence            9999 77775 4455556899999999999999999999999999999999998888887        667899999999


Q ss_pred             CCceEEEeccCCe--EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        237 DSRYFLTISRDGV--CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       237 ~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      -...++.|+....  |.-=+.+.++-+..+...-.-+.+..+++|-++|++++|+|+|+..++|     ++||.||+
T Consensus       242 ~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSG-----GEDG~VR~  313 (327)
T KOG0643|consen  242 LLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSG-----GEDGYVRL  313 (327)
T ss_pred             ccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccC-----CCCceEEE
Confidence            8877776654321  2111222221111111111223678889999999999999999999999     67777987

>KOG0318|consensus

Probab=100.00  E-value=6.1e-33  Score=218.91  Aligned_cols=278  Identities=19%  Similarity=0.275  Sum_probs=209.7

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC--------------------CceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG--------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~--------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      .++-.++|..+-.+.||...|+++.+-+..                    .+-..+++.|..-|+|++|+|+      |.
T Consensus       130 ~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPD------G~  203 (603)
T KOG0318|consen  130 HVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPD------GS  203 (603)
T ss_pred             EEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCC------CC
Confidence            456667777888889999999999866543                    2333456679999999999999      99


Q ss_pred             eEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN  135 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  135 (312)
                      ++||++.||+|.+||=.+++.+           .++.+.++|++..+++++.|.+++|||+.+.  .++.+......  -
T Consensus       204 ~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~--slv~t~~~~~~--v  279 (603)
T KOG0318|consen  204 RFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN--SLVSTWPMGST--V  279 (603)
T ss_pred             eEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc--ceEEEeecCCc--h
Confidence            9999999999999998887762           5667778899999999999999999999985  33444432221  1


Q ss_pred             ccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC-----
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS-----  209 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-----  209 (312)
                      ......+-|-  ...|++.+.+|.+.+ +....+....+.+|...|+++..+|++++|++|+.||.|.-||..++     
T Consensus       280 ~dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~  357 (603)
T KOG0318|consen  280 EDQQVGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRL  357 (603)
T ss_pred             hceEEEEEEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccccc
Confidence            2233344554  667999999999999 88878888889999999999999999999999999999999998760     


Q ss_pred             --------------------------------------------------------------------------------
Q psy15191        210 --------------------------------------------------------------------------------  209 (312)
Q Consensus       210 --------------------------------------------------------------------------------  209 (312)
                                                                                                      
T Consensus       358 ~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~  437 (603)
T KOG0318|consen  358 AGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKV  437 (603)
T ss_pred             ccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcc
Confidence                                                                                            


Q ss_pred             ---------------------------CeEEEEeccCC------CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        210 ---------------------------GRLSLVACSDK------TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       210 ---------------------------~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                                                 ..++.++....      ....|..+|++++++||+.|||++...+.+.+||+.
T Consensus       438 ~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~  517 (603)
T KOG0318|consen  438 SSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVA  517 (603)
T ss_pred             eeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcc
Confidence                                       01111111100      011266677777777777777777777777777766


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +...           ......-|...|.+++|+|+..++||||.|..     |.||
T Consensus       518 s~~~-----------~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~-----Viiy  557 (603)
T KOG0318|consen  518 SREV-----------KTNRWAFHTAKINCVAWSPNNKLVATGSLDTN-----VIIY  557 (603)
T ss_pred             cCce-----------ecceeeeeeeeEEEEEeCCCceEEEeccccce-----EEEE
Confidence            6532           23344459999999999999999999966555     9998

>KOG0276|consensus

Probab=100.00  E-value=1.9e-34  Score=231.93  Aligned_cols=236  Identities=17%  Similarity=0.226  Sum_probs=206.1

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcE
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      .+++..|...|.++.++|.      ..+++++-..|.|.|||.++.....        +....+-...+.+++|+.|..|
T Consensus         6 krk~~~rSdRVKsVd~HPt------ePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~I   79 (794)
T KOG0276|consen    6 KRKFQSRSDRVKSVDFHPT------EPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQI   79 (794)
T ss_pred             hhHhhccCCceeeeecCCC------CceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceE
Confidence            3456668999999999999      8999999999999999999887632        2222333445589999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecccCceeeeecccCCceeEEEECC-C
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVTTWKQIQTLPCHQLTITQLAFSP-D  188 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~~~~~~~~~~~v~~~~~~~-~  188 (312)
                      ++|+..+.+  .+.     .+..|...|.+++.+|...+++++++|-.|++  --..|.+.+.+++|...|++++|+| |
T Consensus        80 rVfnynt~e--kV~-----~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD  152 (794)
T KOG0276|consen   80 RVFNYNTGE--KVK-----TFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKD  152 (794)
T ss_pred             EEEecccce--eeE-----EeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCC
Confidence            999999843  233     34589999999999999999999999999999  4456788899999999999999999 7


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC--ceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS--RYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                      .+.+++++.|++|++|.+....+..++.+       |...|+++.+-+.|  .||++|+.|..|+|||..+..       
T Consensus       153 ~ntFaS~sLDrTVKVWslgs~~~nfTl~g-------HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~-------  218 (794)
T KOG0276|consen  153 PNTFASASLDRTVKVWSLGSPHPNFTLEG-------HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS-------  218 (794)
T ss_pred             ccceeeeeccccEEEEEcCCCCCceeeec-------cccCcceEEeccCCCcceEEecCCCceEEEeecchHH-------
Confidence            78999999999999999999988888887       99999999998755  699999999999999998874       


Q ss_pred             ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                           +++++.||...|..+.|+|.-..+++|     +|||+||||
T Consensus       219 -----CV~TLeGHt~Nvs~v~fhp~lpiiisg-----sEDGTvriW  254 (794)
T KOG0276|consen  219 -----CVQTLEGHTNNVSFVFFHPELPIIISG-----SEDGTVRIW  254 (794)
T ss_pred             -----HHHHhhcccccceEEEecCCCcEEEEe-----cCCccEEEe
Confidence                 899999999999999999999999999     677779999

>KOG0293|consensus

Probab=100.00  E-value=1e-33  Score=217.27  Aligned_cols=240  Identities=17%  Similarity=0.247  Sum_probs=193.2

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------cccccccCCCCCceEEEEeC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------YLPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------~~~~~~~~~~~~~~l~~~~~  107 (312)
                      .++..++.+|..+|..+.|+|+      .++|++|+.|..+.+||..++..         ..+..+.+.|++..+++|+.
T Consensus       259 ~kl~~tlvgh~~~V~yi~wSPD------dryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~  332 (519)
T KOG0293|consen  259 FKLKKTLVGHSQPVSYIMWSPD------DRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSP  332 (519)
T ss_pred             eeeeeeeecccCceEEEEECCC------CCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCC
Confidence            4667889999999999999999      89999999999999999999876         24556667889999999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      |+.+..||++.....   .-+    .-....|.+++..+||+++++.+.|..+++ +.++...+... ....+|++++.|
T Consensus       333 dr~i~~wdlDgn~~~---~W~----gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~li-se~~~its~~iS  404 (519)
T KOG0293|consen  333 DRTIIMWDLDGNILG---NWE----GVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLI-SEEQPITSFSIS  404 (519)
T ss_pred             CCcEEEecCCcchhh---ccc----ccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccc-cccCceeEEEEc
Confidence            999999999863311   111    011245899999999999999999999999 43332222222 355789999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      .|++++++.-.+..+++||+.....+..+.+...     ...+-.-+|.- +..++++||+|+.|+||+..++.      
T Consensus       405 ~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq-----~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk------  473 (519)
T KOG0293|consen  405 KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ-----GHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK------  473 (519)
T ss_pred             CCCcEEEEEcccCeeEEeecchhhHHHHhhcccc-----cceEEEeccCCCCcceEEecCCCceEEEEEccCCc------
Confidence            9999999999999999999998777776666432     23344556653 45899999999999999998884      


Q ss_pred             cccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                            ++..+.||...|++++|+|.. .++|+|     ++||+||||
T Consensus       474 ------ll~~LsGHs~~vNcVswNP~~p~m~ASa-----sDDgtIRIW  510 (519)
T KOG0293|consen  474 ------LLAVLSGHSKTVNCVSWNPADPEMFASA-----SDDGTIRIW  510 (519)
T ss_pred             ------eeEeecCCcceeeEEecCCCCHHHhhcc-----CCCCeEEEe
Confidence                  899999999999999999965 789999     555559999

>KOG0319|consensus

Probab=100.00  E-value=6.9e-34  Score=232.44  Aligned_cols=270  Identities=21%  Similarity=0.324  Sum_probs=218.4

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCC---------------------Cc-eEEEEccccCcEEEEEEecCcCcCC
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEG---------------------GK-VLYTLTNHKSKVMAVKWVLNTSLDP   63 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~---------------------~~-~~~~~~~h~~~v~~~~~~~~~~~~~   63 (312)
                      -+||+...+.+...|+||.+.|..+.|.+.-                     .. ++..+..|.+.|+++.|+++     
T Consensus       129 v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d-----  203 (775)
T KOG0319|consen  129 VKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSED-----  203 (775)
T ss_pred             EEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccC-----
Confidence            4799999999999999999999999854432                     22 25566789999999999998     


Q ss_pred             CCceEEEecCCCcEEEeeecCCccc-------------------------------------------------------
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGNY-------------------------------------------------------   88 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~~-------------------------------------------------------   88 (312)
                       +..++++++|..+.|||+...+..                                                       
T Consensus       204 -~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~  282 (775)
T KOG0319|consen  204 -SLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSE  282 (775)
T ss_pred             -CceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCch
Confidence             777778888888888876432210                                                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy15191         89 --------------------------------------------------------------------------------   88 (312)
Q Consensus        89 --------------------------------------------------------------------------------   88 (312)
                                                                                                      
T Consensus       283 e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~  362 (775)
T KOG0319|consen  283 EIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIP  362 (775)
T ss_pred             hhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEe
Confidence                                                                                            


Q ss_pred             ----ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEEe
Q psy15191         89 ----LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHLD  163 (312)
Q Consensus        89 ----~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~d  163 (312)
                          .+........+.+|++|+.|.++++|.++....   .........+|...|.+++++..+ .+|++++.|+++++ 
T Consensus       363 GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~---~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~-  438 (775)
T KOG0319|consen  363 GHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCS---KSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKL-  438 (775)
T ss_pred             CchhheeeeeecccCcEEEEecCCceEEEEEecCCcc---hhhhhhhhcccccccceeeecccCccEEEEecCCceEEE-
Confidence                011111123445889999999999998843222   222333445899999999997754 57899999999999 


Q ss_pred             cccCceee--------------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191        164 VTTWKQIQ--------------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII  229 (312)
Q Consensus       164 ~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v  229 (312)
                         |.+..              ....|...|++++++|+.++++|||.|++.++|++........+.+       |...|
T Consensus       439 ---W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG-------H~RGv  508 (775)
T KOG0319|consen  439 ---WDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG-------HTRGV  508 (775)
T ss_pred             ---ecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC-------Cccce
Confidence               76655              1227999999999999999999999999999999998777888887       99999


Q ss_pred             EEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceE
Q psy15191        230 WGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAI  309 (312)
Q Consensus       230 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i  309 (312)
                      .++.|+|..+.++++|.|++|+||.+.+..            ++.++.||...|..+.|-.+|+.|++++.||.     |
T Consensus       509 w~V~Fs~~dq~laT~SgD~TvKIW~is~fS------------ClkT~eGH~~aVlra~F~~~~~qliS~~adGl-----i  571 (775)
T KOG0319|consen  509 WCVSFSKNDQLLATCSGDKTVKIWSISTFS------------CLKTFEGHTSAVLRASFIRNGKQLISAGADGL-----I  571 (775)
T ss_pred             EEEEeccccceeEeccCCceEEEEEeccce------------eeeeecCccceeEeeeeeeCCcEEEeccCCCc-----E
Confidence            999999999999999999999999998874            89999999999999999999999999955555     9


Q ss_pred             EeC
Q psy15191        310 IIW  312 (312)
Q Consensus       310 ~iW  312 (312)
                      ++|
T Consensus       572 KlW  574 (775)
T KOG0319|consen  572 KLW  574 (775)
T ss_pred             EEE
Confidence            999

>KOG0278|consensus

Probab=100.00  E-value=1.5e-34  Score=208.11  Aligned_cols=256  Identities=20%  Similarity=0.230  Sum_probs=218.9

Q ss_pred             EEeccCCCceEEEEEeCCC----------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191         18 YTLTNHKSKVMAVKWNGEG----------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK   75 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~----------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg   75 (312)
                      .+..+|+.+|-.++|++-+                      |.-+-+|.||.+.|++.....+      ...-|+++.|-
T Consensus         8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~n------a~~aasaaadf   81 (334)
T KOG0278|consen    8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKN------ATRAASAAADF   81 (334)
T ss_pred             eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCch------hhhhhhhcccc
Confidence            5678899999999877643                      5668899999999999998777      77889999999


Q ss_pred             cEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC
Q psy15191         76 TAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG  148 (312)
Q Consensus        76 ~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  148 (312)
                      +-+|||.-++..+       -+..+.++.+..+|++|+.+..+++||++..+      .+..++.+|...|..+-|....
T Consensus        82 takvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~------App~E~~ghtg~Ir~v~wc~eD  155 (334)
T KOG0278|consen   82 TAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK------APPKEISGHTGGIRTVLWCHED  155 (334)
T ss_pred             hhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCC------CCchhhcCCCCcceeEEEeccC
Confidence            9999999888763       34456677888899999999999999998744      3455667999999999999999


Q ss_pred             CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccce
Q psy15191        149 DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR  227 (312)
Q Consensus       149 ~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~  227 (312)
                      +.+++...|+.|++ |.++...++.+. .+.+|+++.++++|++|.+ ...+.|.+||..+...+..+.        ...
T Consensus       156 ~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf~~lKs~k--------~P~  225 (334)
T KOG0278|consen  156 KCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSFGLLKSYK--------MPC  225 (334)
T ss_pred             ceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEE-ecCceeEEeccccccceeecc--------Ccc
Confidence            99999999999999 888888887776 6788999999999986654 567889999999988887776        445


Q ss_pred             eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE-eeccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191        228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK-LYGHGYEIYSLAASHDGTLLASACKATKPEH  306 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~d  306 (312)
                      .|.+..++|+...+++|++|..++.||+.++.            .+.. ..+|.++|.++.|+|+|...++|     ++|
T Consensus       226 nV~SASL~P~k~~fVaGged~~~~kfDy~Tge------------Ei~~~nkgh~gpVhcVrFSPdGE~yAsG-----SED  288 (334)
T KOG0278|consen  226 NVESASLHPKKEFFVAGGEDFKVYKFDYNTGE------------EIGSYNKGHFGPVHCVRFSPDGELYASG-----SED  288 (334)
T ss_pred             ccccccccCCCceEEecCcceEEEEEeccCCc------------eeeecccCCCCceEEEEECCCCceeecc-----CCC
Confidence            58889999999999999999999999999984            3444 37999999999999999999999     666


Q ss_pred             ceEEeC
Q psy15191        307 AAIIIW  312 (312)
Q Consensus       307 g~i~iW  312 (312)
                      |+|++|
T Consensus       289 GTirlW  294 (334)
T KOG0278|consen  289 GTIRLW  294 (334)
T ss_pred             ceEEEE
Confidence            669999

>KOG0645|consensus

Probab=100.00  E-value=2.7e-32  Score=198.52  Aligned_cols=235  Identities=20%  Similarity=0.342  Sum_probs=192.7

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEEEE
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSC  105 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~  105 (312)
                      ..++.+++|.+.++.++|+|.    . |..||||+.|+.|++|+...+..            ..+...+++|.+++|+++
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~----~-g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~a   79 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPG----K-GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASA   79 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccC----C-ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEe
Confidence            357889999999999999996    2 56899999999999999985332            355667788999999999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ec---ccCceeeeecccCCcee
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DV---TTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~---~~~~~~~~~~~~~~~v~  181 (312)
                      +.|.++.||.-...+-.++..+.     +|...|.+++|+++|++|++++.|..+-+ ..   ..++....++.|...|.
T Consensus        80 SFD~t~~Iw~k~~~efecv~~lE-----GHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK  154 (312)
T KOG0645|consen   80 SFDATVVIWKKEDGEFECVATLE-----GHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVK  154 (312)
T ss_pred             eccceEEEeecCCCceeEEeeee-----ccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccccc
Confidence            99999999988776666655554     99999999999999999999999999999 11   23345566779999999


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCC---eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSG---RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      .+.|+|...+|++++.|.+|++|+-....   ..+.+.+       |...|.+++|+|.|..|++++.|+.|+||.....
T Consensus       155 ~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g-------~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~  227 (312)
T KOG0645|consen  155 HVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG-------HENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD  227 (312)
T ss_pred             EEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC-------ccceEEEEEecCCCceEEEecCCcceEeeeeccC
Confidence            99999999999999999999999877432   3444444       7778999999999999999999999999975432


Q ss_pred             CCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      -                -..|+..++.++|.  ...|++++     .|+.|+++
T Consensus       228 ~----------------~~~~sr~~Y~v~W~--~~~IaS~g-----gD~~i~lf  258 (312)
T KOG0645|consen  228 L----------------SGMHSRALYDVPWD--NGVIASGG-----GDDAIRLF  258 (312)
T ss_pred             c----------------chhcccceEeeeec--ccceEecc-----CCCEEEEE
Confidence            1                11377899999998  45799995     45558874

>KOG0285|consensus

Probab=100.00  E-value=4.2e-33  Score=210.28  Aligned_cols=271  Identities=20%  Similarity=0.255  Sum_probs=226.3

Q ss_pred             CCceEeCCCCeEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191          5 PGDVVNGEGGKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      |.+-|..+ -++...+.+|.+-|.|++                   ||..+|++..++.||...|..+++++.      .
T Consensus       133 ~rPeWHap-wKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~r------H  205 (460)
T KOG0285|consen  133 PRPEWHAP-WKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKR------H  205 (460)
T ss_pred             CCccccCc-ceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeeccc------C
Confidence            33445444 466778899999999998                   888889999999999999999999998      8


Q ss_pred             ceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      .|+++++.|+.|+.||++..+.        ..+.++..+|.-..|++|+.|.++++||+++..       .+..+.+|..
T Consensus       206 pYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~-------~V~~l~GH~~  278 (460)
T KOG0285|consen  206 PYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA-------SVHVLSGHTN  278 (460)
T ss_pred             ceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccc-------eEEEecCCCC
Confidence            8999999999999999998775        356666778888899999999999999999843       2333459999


Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      +|..+.+.|....+++|+.|++|++ |++.++....+..|...+++++.+|....|++++.| .|+-|++..+..+..+.
T Consensus       279 ~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nls  357 (460)
T KOG0285|consen  279 PVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLS  357 (460)
T ss_pred             cceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccc
Confidence            9999999999999999999999999 777777777788999999999999999999998877 48999999888777666


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec-----cCcceeEEEeccC
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-----HGYEIYSLAASHD  291 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~  291 (312)
                      +       |..-|++++.+.|+ ++++|+++|.+.+||.+++..-+.         .+...+     .+..|.+.+|...
T Consensus       358 g-------h~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~---------~~t~vqpGSl~sEagI~as~fDkt  420 (460)
T KOG0285|consen  358 G-------HNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQR---------GQTIVQPGSLESEAGIFASCFDKT  420 (460)
T ss_pred             c-------ccceeeeeeeccCc-eEEEcCCceEEEEEecCcCccccc---------ccccccCCccccccceeEEeeccc
Confidence            5       88889999998775 688899999999999998854322         211211     3457899999999


Q ss_pred             CCeEEEEecCCCcccceEEeC
Q psy15191        292 GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       292 ~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |..|++|..|.+     |++|
T Consensus       421 g~rlit~eadKt-----Ik~~  436 (460)
T KOG0285|consen  421 GSRLITGEADKT-----IKMY  436 (460)
T ss_pred             CceEEeccCCcc-----eEEE
Confidence            999999965555     9988

>KOG0291|consensus

Probab=100.00  E-value=3.3e-32  Score=223.35  Aligned_cols=269  Identities=19%  Similarity=0.228  Sum_probs=210.1

Q ss_pred             eEEEEeccCCCceEEEEEeCCCC---------------------ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGEGG---------------------KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL   73 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~~~---------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~   73 (312)
                      .+-.++.+|-..|.++.|+.++.                     -....+.+|.+.|-.+-|..+      ...+.|.+.
T Consensus       136 vl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~------~~~l~tvsk  209 (893)
T KOG0291|consen  136 VLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGAN------SLDLYTVSK  209 (893)
T ss_pred             eEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccC------cceEEEEec
Confidence            44567778999999999988762                     124567889999999999888      778999999


Q ss_pred             CCcEEEeeecC------------------------Ccc------------------cccccccCCCCCceEEEEeCCCcE
Q psy15191         74 DKTAILWKYVS------------------------EGN------------------YLPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        74 dg~i~vw~~~~------------------------~~~------------------~~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      ||.+.+|....                        .+.                  ..+....+++....|+++-..|..
T Consensus       210 dG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f  289 (893)
T KOG0291|consen  210 DGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEF  289 (893)
T ss_pred             CceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCee
Confidence            99999998761                        110                  122233334444445555555544


Q ss_pred             EEEcCCCCcce--------------------ee----------------eeeeecccCCCccceeEEEECCCCCeEEEee
Q psy15191        112 IVWAPDPTTGL--------------------WL----------------ETARVGEVGGNTLGFYGCKFGPRGDYIIAHG  155 (312)
Q Consensus       112 ~i~d~~~~~~~--------------------~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  155 (312)
                      .+|++......                    ++                ....+...++|...+.+++++|||+++++|+
T Consensus       290 ~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~  369 (893)
T KOG0291|consen  290 GLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA  369 (893)
T ss_pred             EEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc
Confidence            44443221100                    00                0111223358899999999999999999999


Q ss_pred             cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        156 FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       156 ~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                      .||.|++ |..+.-+..++..|+..|+.+.|+..|+.+++++.||+|+.||+...+..+.+..+      ......+++.
T Consensus       370 eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P------~p~Qfscvav  443 (893)
T KOG0291|consen  370 EDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSP------EPIQFSCVAV  443 (893)
T ss_pred             CCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCC------CceeeeEEEE
Confidence            9999999 55555566677799999999999999999999999999999999999999998876      4455678999


Q ss_pred             cCCCceEEEeccCC-eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        235 SHDSRYFLTISRDG-VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       235 ~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|.|.++.+|+.|. .|++|++.++.            .+..+.||+++|.+++|+|++..|+++|.|++     ||+|
T Consensus       444 D~sGelV~AG~~d~F~IfvWS~qTGq------------llDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT-----VRiW  505 (893)
T KOG0291|consen  444 DPSGELVCAGAQDSFEIFVWSVQTGQ------------LLDILSGHEGPVSGLSFSPDGSLLASGSWDKT-----VRIW  505 (893)
T ss_pred             cCCCCEEEeeccceEEEEEEEeecCe------------eeehhcCCCCcceeeEEccccCeEEeccccce-----EEEE
Confidence            99999999999887 79999999984            78889999999999999999999999988888     9999

>KOG0266|consensus

Probab=100.00  E-value=2.1e-32  Score=229.24  Aligned_cols=249  Identities=25%  Similarity=0.385  Sum_probs=206.6

Q ss_pred             EeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC-cc--------cccccccCCCCCc
Q psy15191         32 WNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE-GN--------YLPYHMRDDSKQL  100 (312)
Q Consensus        32 w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~-~~--------~~~~~~~~~~~~~  100 (312)
                      |...+++  ..+.+.+|...|..++|+|+      ++++++++.|++|+|||+... ..        ..+..+.+++.+.
T Consensus       186 ~~~~~~~~~~~~~l~~h~~~v~~~~fs~d------~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~  259 (456)
T KOG0266|consen  186 WKLEGIKSNLLRELSGHTRGVSDVAFSPD------GSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGN  259 (456)
T ss_pred             eecccccchhhccccccccceeeeEECCC------CcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCC
Confidence            4444455  67777899999999999999      899999999999999999433 33        2456677788889


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc--eeeeecccC
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQ  177 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~  177 (312)
                      ++++|+.|++|++||+++  +.+...+     .+|...|.+++|++++++|++++.|+.+++ |+.++.  +...+..+.
T Consensus       260 ~i~Sgs~D~tvriWd~~~--~~~~~~l-----~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~  332 (456)
T KOG0266|consen  260 LLVSGSDDGTVRIWDVRT--GECVRKL-----KGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAE  332 (456)
T ss_pred             EEEEecCCCcEEEEeccC--CeEEEee-----eccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCC
Confidence            999999999999999998  4444444     389999999999999999999999999999 888887  345555554


Q ss_pred             C--ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        178 L--TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       178 ~--~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      .  .++.+.|+|++.++++++.|+.+++||+........+.+....    ...+.+...++.++++++|+.|+.|++||+
T Consensus       333 ~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~  408 (456)
T KOG0266|consen  333 NSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL----VRCIFSPTLSTGGKLIYSGSEDGSVYVWDS  408 (456)
T ss_pred             CCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc----ceeEecccccCCCCeEEEEeCCceEEEEeC
Confidence            4  4999999999999999999999999999998888877764321    124556667889999999999999999999


Q ss_pred             CCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+..            .+..+.+| ...+..++++|..+++++++.   ..|+.|++|
T Consensus       409 ~s~~------------~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~---~~d~~~~~w  451 (456)
T KOG0266|consen  409 SSGG------------ILQRLEGHSKAAVSDLSSHPTENLIASSSF---EGDGLIRLW  451 (456)
T ss_pred             Cccc------------hhhhhcCCCCCceeccccCCCcCeeeecCc---CCCceEEEe
Confidence            8763            67788899 889999999999999999963   245669998

>KOG0281|consensus

Probab=100.00  E-value=8.9e-35  Score=218.75  Aligned_cols=246  Identities=21%  Similarity=0.333  Sum_probs=202.6

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCC------CCCceEEEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD------SKQLHLLSC  105 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~------~~~~~l~~~  105 (312)
                      |+..+..+++.+.||++.|.|+.|..        +.+++|+.|.+|+|||.++++++...+.+..      -.+.+++++
T Consensus       222 WD~n~~~c~~~L~GHtGSVLCLqyd~--------rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtc  293 (499)
T KOG0281|consen  222 WDKNSLECLKILTGHTGSVLCLQYDE--------RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTC  293 (499)
T ss_pred             eccccHHHHHhhhcCCCcEEeeeccc--------eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEe
Confidence            88888888999999999999999954        5999999999999999999998655443331      133489999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      +.|.++.+||+.......    ....+.+|...|..+.|+  .+++++++.|.++++ ++.+.+.+..+.+|...|.|+.
T Consensus       294 SkDrsiaVWdm~sps~it----~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQ  367 (499)
T KOG0281|consen  294 SKDRSIAVWDMASPTDIT----LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ  367 (499)
T ss_pred             cCCceeEEEeccCchHHH----HHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehh
Confidence            999999999998754221    122335899999999885  459999999999999 8888888999999999999988


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      +  .++++++|+.|.+|++||+..+..+..+.+       |+.-|.++.|  +.+.+++|+.||+|+|||+..+..+...
T Consensus       368 Y--r~rlvVSGSSDntIRlwdi~~G~cLRvLeG-------HEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~  436 (499)
T KOG0281|consen  368 Y--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-------HEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAP  436 (499)
T ss_pred             c--cCeEEEecCCCceEEEEeccccHHHHHHhc-------hHHhhhheee--cCceeeeccccceEEEEecccccCCccc
Confidence            7  589999999999999999999999988887       8888999999  6788999999999999999876443221


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...   -++..+..|++.|..+.|.  ...+++++.|.+     |.||
T Consensus       437 ~~~---~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddt-----ILiW  474 (499)
T KOG0281|consen  437 AST---LCLRTLVEHSGRVFRLQFD--EFQIISSSHDDT-----ILIW  474 (499)
T ss_pred             ccc---hHHHhhhhccceeEEEeec--ceEEEeccCCCe-----EEEE
Confidence            111   1667778899999999984  467888866666     9998

>KOG0284|consensus

Probab=100.00  E-value=2.9e-34  Score=219.69  Aligned_cols=229  Identities=20%  Similarity=0.297  Sum_probs=193.6

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  118 (312)
                      ...|..+.|.|+      |+.|++|+..|.+.+|+...-..        ..+..+.+++++..+++|+.+|.|++|+...
T Consensus        96 kc~V~~v~WtPe------GRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm  169 (464)
T KOG0284|consen   96 KCPVNVVRWTPE------GRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM  169 (464)
T ss_pred             ccceeeEEEcCC------CceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch
Confidence            457999999999      99999999999999999754322        3455566788889999999999999999875


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR  197 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  197 (312)
                      ..-.   ...    ..|...|.+++|+|+...++++++||.|+| |....+....+.+|.-.|.+++|+|...++++++.
T Consensus       170 nnVk---~~~----ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgsk  242 (464)
T KOG0284|consen  170 NNVK---IIQ----AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSK  242 (464)
T ss_pred             hhhH---Hhh----HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccC
Confidence            3211   111    245588999999999999999999999999 55545555567799999999999999999999999


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY  277 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  277 (312)
                      |..|++||.+++..+..+..       |+..|..+.|+|++++|+++|.|..++++|++..+            .++.++
T Consensus       243 DnlVKlWDprSg~cl~tlh~-------HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mk------------El~~~r  303 (464)
T KOG0284|consen  243 DNLVKLWDPRSGSCLATLHG-------HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMK------------ELFTYR  303 (464)
T ss_pred             CceeEeecCCCcchhhhhhh-------ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhH------------HHHHhh
Confidence            99999999999998887776       89999999999999999999999999999998542            688899


Q ss_pred             ccCcceeEEEeccC-CCeEEEEecCCCcccceEEeC
Q psy15191        278 GHGYEIYSLAASHD-GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       278 ~~~~~v~~~~~s~~-~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|...|++++|+|- ..+|.+|+.|+.     |..|
T Consensus       304 ~Hkkdv~~~~WhP~~~~lftsgg~Dgs-----vvh~  334 (464)
T KOG0284|consen  304 GHKKDVTSLTWHPLNESLFTSGGSDGS-----VVHW  334 (464)
T ss_pred             cchhhheeeccccccccceeeccCCCc-----eEEE
Confidence            99999999999995 467788855554     8876

>KOG0306|consensus

Probab=100.00  E-value=2.7e-32  Score=223.70  Aligned_cols=263  Identities=19%  Similarity=0.292  Sum_probs=219.4

Q ss_pred             EEeccCCCceEEEE------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEE
Q psy15191         18 YTLTNHKSKVMAVK------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAIL   79 (312)
Q Consensus        18 ~~~~~h~~~v~~~~------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~v   79 (312)
                      .++.||+..|..++                  |+.++.++++++..  +-+.+..|.|.      ++++++|...|.+.+
T Consensus       367 i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~--~y~l~~~Fvpg------d~~Iv~G~k~Gel~v  438 (888)
T KOG0306|consen  367 IEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITC--GYILASKFVPG------DRYIVLGTKNGELQV  438 (888)
T ss_pred             eeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEecc--ccEEEEEecCC------CceEEEeccCCceEE
Confidence            45667888887776                  89899999999985  38999999998      899999999999999


Q ss_pred             eeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCc-----ceeeeeeeecccCCCccceeEEEECC
Q psy15191         80 WKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT-----GLWLETARVGEVGGNTLGFYGCKFGP  146 (312)
Q Consensus        80 w~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~  146 (312)
                      +|+......        .+......|++..+++++.|.+|++||..--.     ..............-...|.|+++||
T Consensus       439 fdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp  518 (888)
T KOG0306|consen  439 FDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP  518 (888)
T ss_pred             EEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC
Confidence            999876652        33344557888899999999999999975211     10111111111123456799999999


Q ss_pred             CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        147 RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       147 ~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                      |+++|+++--|.++++ -+.+.+..-.+.+|.-+|.+|..+||++.++||+.|+.|++|-+.-+.+...+-.       |
T Consensus       519 dgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-------H  591 (888)
T KOG0306|consen  519 DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-------H  591 (888)
T ss_pred             CCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-------c
Confidence            9999999999999999 8888888889999999999999999999999999999999999886665544444       8


Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcc
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPE  305 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~  305 (312)
                      ...|.++.|-|+...+.+++.|+.|+-||-..-            +.++.+.+|...|++++.+|+|.+++++|.|..  
T Consensus       592 dDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kF------------e~iq~L~~H~~ev~cLav~~~G~~vvs~shD~s--  657 (888)
T KOG0306|consen  592 DDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKF------------EEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKS--  657 (888)
T ss_pred             cCceeEEEEcccceeEEEecCcceEEeechhhh------------hhheeeccchheeeeeEEcCCCCeEEeccCCce--
Confidence            899999999999999999999999999996554            378999999999999999999999999976666  


Q ss_pred             cceEEeC
Q psy15191        306 HAAIIIW  312 (312)
Q Consensus       306 dg~i~iW  312 (312)
                         |++|
T Consensus       658 ---IRlw  661 (888)
T KOG0306|consen  658 ---IRLW  661 (888)
T ss_pred             ---eEee
Confidence               9999

>KOG0265|consensus

Probab=100.00  E-value=1.2e-32  Score=202.98  Aligned_cols=241  Identities=19%  Similarity=0.328  Sum_probs=199.0

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------cccccccCCCCCceEEEEeCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------YLPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------~~~~~~~~~~~~~~l~~~~~d  108 (312)
                      .++..+.+|.+.|+.+.|+|+      |.+||||+.|..|.+|+......         -.++-..+..++..+++++.|
T Consensus        38 ap~m~l~gh~geI~~~~F~P~------gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtD  111 (338)
T KOG0265|consen   38 APIMLLPGHKGEIYTIKFHPD------GSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTD  111 (338)
T ss_pred             chhhhcCCCcceEEEEEECCC------CCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCC
Confidence            345567899999999999999      99999999999999999654332         345556677888899999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCe-EEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY-IIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      .+++.||+++++  ...+.     .+|..-+.++.-+.-|.. +.+++.|+++++ |+++-+.++.++ .+..++++.|.
T Consensus       112 k~v~~wD~~tG~--~~rk~-----k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~  183 (338)
T KOG0265|consen  112 KTVRGWDAETGK--RIRKH-----KGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFK  183 (338)
T ss_pred             ceEEEEecccce--eeehh-----ccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEec
Confidence            999999999854  33333     378888888886555554 557889999999 666655555554 45689999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                      .++..+.+|+-|+.|++||++.......+.+       |..+|+.+..+|+|.++.+-+.|+++++||++.-.+.+.   
T Consensus       184 d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG-------h~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R---  253 (338)
T KOG0265|consen  184 DTSDQVISGGIDNDIKVWDLRKNDGLYTLSG-------HADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR---  253 (338)
T ss_pred             ccccceeeccccCceeeeccccCcceEEeec-------ccCceeeEEeccCCCccccccccceEEEEEecccCCCCc---
Confidence            9999999999999999999999999998888       999999999999999999999999999999987755432   


Q ss_pred             ccccceeEEeeccC----cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        267 NTLWPEVQKLYGHG----YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       267 ~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                           ++..+.+|.    .....++|+|++..+.+|+.|+.     +++|
T Consensus       254 -----~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~-----vyvw  293 (338)
T KOG0265|consen  254 -----CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRF-----VYVW  293 (338)
T ss_pred             -----eEEEeecchhhhhhhcceeeccCCCCccccccccce-----EEEe
Confidence                 577777653    34567899999999999977776     9998

>KOG1407|consensus

Probab=100.00  E-value=4.3e-32  Score=196.50  Aligned_cols=262  Identities=18%  Similarity=0.204  Sum_probs=214.4

Q ss_pred             EEeccCCCceEEEEEeCCCCceE---------------------EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191         18 YTLTNHKSKVMAVKWNGEGGKVL---------------------YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT   76 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~~~~---------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~   76 (312)
                      ..+++|...|..++|+.++.++.                     ....+|.+.|-.++|.|.     +...|++++.|.+
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~-----~~d~~atas~dk~   88 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPK-----HPDLFATASGDKT   88 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCC-----CCcceEEecCCce
Confidence            44667888888888887663321                     134679999999999987     3568999999999


Q ss_pred             EEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191         77 AILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        77 i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                      |++||++.+++.       .-....++|++.+++++..|..|...|.++.+.....        .....+..++|+.++.
T Consensus        89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~--------~~~~e~ne~~w~~~nd  160 (313)
T KOG1407|consen   89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEE--------QFKFEVNEISWNNSND  160 (313)
T ss_pred             EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehh--------cccceeeeeeecCCCC
Confidence            999999998873       2344556788899999999999999999874322211        2234567889998888


Q ss_pred             eEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee
Q psy15191        150 YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       150 ~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  228 (312)
                      +++.....|.|.| ...+.+.+..+++|+....++.|+|+|++|++|+.|-.+.+||+...-..+.+..       +.-+
T Consensus       161 ~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR-------ldwp  233 (313)
T KOG1407|consen  161 LFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISR-------LDWP  233 (313)
T ss_pred             EEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecc-------ccCc
Confidence            8888888899999 6667888889999999999999999999999999999999999998877777776       7888


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc----
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP----  304 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~----  304 (312)
                      |..+.|+.+|++||+||+|..|-|=+++++.            .+..+ .+.++...++|+|...+||.++.|..+    
T Consensus       234 VRTlSFS~dg~~lASaSEDh~IDIA~vetGd------------~~~eI-~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~r  300 (313)
T KOG1407|consen  234 VRTLSFSHDGRMLASASEDHFIDIAEVETGD------------RVWEI-PCEGPTFTVAWHPKRPLLAYACDDKDGDSNR  300 (313)
T ss_pred             eEEEEeccCcceeeccCccceEEeEecccCC------------eEEEe-eccCCceeEEecCCCceeeEEecCCCCcccc
Confidence            9999999999999999999999999998884            23333 368889999999999999999988653    


Q ss_pred             ccceEEeC
Q psy15191        305 EHAAIIIW  312 (312)
Q Consensus       305 ~dg~i~iW  312 (312)
                      +-|.|+++
T Consensus       301 eag~vKiF  308 (313)
T KOG1407|consen  301 EAGTVKIF  308 (313)
T ss_pred             ccceeEEe
Confidence            34777764

>KOG0266|consensus

Probab=100.00  E-value=1.3e-31  Score=224.55  Aligned_cols=239  Identities=26%  Similarity=0.387  Sum_probs=197.3

Q ss_pred             EEEEccc-cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCCCCceEEEEeCC
Q psy15191         40 LYTLTNH-KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        40 ~~~~~~h-~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~~~~~l~~~~~d  108 (312)
                      ...+..| ...|.++.|+++      |+.+++++.|+.+++|+.....  .        ..+..+.+++++.++++++.|
T Consensus       151 ~~~~~~~~~~sv~~~~fs~~------g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D  224 (456)
T KOG0266|consen  151 EQTLAGHECPSVTCVDFSPD------GRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDD  224 (456)
T ss_pred             eeeecccccCceEEEEEcCC------CCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCC
Confidence            4445444 788999999999      9999999999999999995554  2        345566778899999999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      ++|++||+... ...+..+     .+|...|++++|+|+++.+++|+.|+.|++ |+++.++...+.+|.+.|++++|++
T Consensus       225 ~tiriwd~~~~-~~~~~~l-----~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~  298 (456)
T KOG0266|consen  225 KTLRIWDLKDD-GRNLKTL-----KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP  298 (456)
T ss_pred             ceEEEeeccCC-CeEEEEe-----cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC
Confidence            99999999431 2333333     489999999999999999999999999999 8888888889999999999999999


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      ++++|++++.|+.|++||+.+...  ...+.....    .. +++.++|+|++.+|++++.|+.+++||+..+.      
T Consensus       299 d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~----~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~------  367 (456)
T KOG0266|consen  299 DGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAEN----SA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGK------  367 (456)
T ss_pred             CCCEEEEcCCCccEEEEECCCCceeeeecccCCCC----CC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCc------
Confidence            999999999999999999998873  344433211    22 69999999999999999999999999999874      


Q ss_pred             cccccceeEEeeccCcc---eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHGYE---IYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            ....+.+|...   +.+...++.+.++++|+     +|+.|++|
T Consensus       368 ------~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~-----~d~~v~~~  406 (456)
T KOG0266|consen  368 ------SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGS-----EDGSVYVW  406 (456)
T ss_pred             ------ceeeecccCCcceeEecccccCCCCeEEEEe-----CCceEEEE
Confidence                  56666777663   44556688999999995     55559998

>KOG0275|consensus

Probab=100.00  E-value=1.7e-33  Score=210.30  Aligned_cols=238  Identities=20%  Similarity=0.259  Sum_probs=199.5

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------cccccccCCCCCceEEEEeCCC
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------YLPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------~~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      ....+.|..|+|+      |++|++|+.||.|.+||..+++.                -.+.+..++.+...+++|+.||
T Consensus       212 ~KSh~EcA~FSPD------gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDG  285 (508)
T KOG0275|consen  212 QKSHVECARFSPD------GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDG  285 (508)
T ss_pred             cccchhheeeCCC------CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCC
Confidence            4566888999998      99999999999999999988875                2455666777888999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCC
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD  188 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~  188 (312)
                      .|++|.+++  +.++..+.    ..|...|+++.|+.|+..+++++.|..+++ -+++++..+.+++|...|+...|++|
T Consensus       286 kIKvWri~t--G~ClRrFd----rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~d  359 (508)
T KOG0275|consen  286 KIKVWRIET--GQCLRRFD----RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDD  359 (508)
T ss_pred             cEEEEEEec--chHHHHhh----hhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCC
Confidence            999999998  44554444    368889999999999999999999999999 99999999999999999999999999


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------------------------------------Cc----cccee
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------------------------------------NG----VHKRI  228 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------------------------------~~----~~~~~  228 (312)
                      |..+++++.||+|++|+..+.+.+..++.....                                    .+    ...+.
T Consensus       360 G~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGd  439 (508)
T KOG0275|consen  360 GHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGD  439 (508)
T ss_pred             CCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCc
Confidence            999999999999999999885444333321110                                    00    02334


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccce
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAA  308 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~  308 (312)
                      ..+.+.+|.|.++.+.++|+.++-|.+.++.            .-..+.-|+..|..++-+|..++||+-     ++||.
T Consensus       440 Fi~~~lSpkGewiYcigED~vlYCF~~~sG~------------LE~tl~VhEkdvIGl~HHPHqNllAsY-----sEDgl  502 (508)
T KOG0275|consen  440 FINAILSPKGEWIYCIGEDGVLYCFSVLSGK------------LERTLPVHEKDVIGLTHHPHQNLLASY-----SEDGL  502 (508)
T ss_pred             eEEEEecCCCcEEEEEccCcEEEEEEeecCc------------eeeeeecccccccccccCcccchhhhh-----cccch
Confidence            4556789999999999999999999998885            456677899999999999999999999     66777


Q ss_pred             EEeC
Q psy15191        309 IIIW  312 (312)
Q Consensus       309 i~iW  312 (312)
                      +++|
T Consensus       503 lKLW  506 (508)
T KOG0275|consen  503 LKLW  506 (508)
T ss_pred             hhhc
Confidence            9999

>KOG0316|consensus

Probab=100.00  E-value=1.2e-31  Score=191.48  Aligned_cols=236  Identities=17%  Similarity=0.208  Sum_probs=195.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |+|..+.+++++.+|..+|..++.+.+      +..|++|+.|..+.+||+++++..        .+....++.+...++
T Consensus        44 WNp~rg~liktYsghG~EVlD~~~s~D------nskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~  117 (307)
T KOG0316|consen   44 WNPLRGALIKTYSGHGHEVLDAALSSD------NSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVA  117 (307)
T ss_pred             ecccccceeeeecCCCceeeecccccc------ccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEE
Confidence            888889999999999999999999888      889999999999999999999873        344455667777999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +|+.|..+++||.+......+..+     ......|.++..+  +..+++|+.||+++. |++.+.+.....+  .+|++
T Consensus       118 SgsfD~s~r~wDCRS~s~ePiQil-----dea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~g--~pit~  188 (307)
T KOG0316|consen  118 SGSFDSSVRLWDCRSRSFEPIQIL-----DEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYFG--HPITS  188 (307)
T ss_pred             eccccceeEEEEcccCCCCccchh-----hhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhcC--Cccee
Confidence            999999999999998654443333     3556678777764  567999999999999 7777777665544  57999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      ++|++|++..+.++.|+++++.|-.+++.+..+.+....     ..=...+++.....+++|++||.|++||+....   
T Consensus       189 vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~-----eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~---  260 (307)
T KOG0316|consen  189 VSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNM-----EYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDET---  260 (307)
T ss_pred             EEecCCCCEEEEeeccceeeecccchhHHHHHhcccccc-----eeeeeeeecccceeEEeccCCceEEEEEeccce---
Confidence            999999999999999999999999999998888875432     223456778888899999999999999998874   


Q ss_pred             ccccccccceeEEeeccCcc-eeEEEeccCCCeEEEEe
Q psy15191        263 DLVQNTLWPEVQKLYGHGYE-IYSLAASHDGTLLASAC  299 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~s  299 (312)
                               .+..+..+... |.+++++|.-.-++++.
T Consensus       261 ---------~~sk~~~~~~v~v~dl~~hp~~~~f~~A~  289 (307)
T KOG0316|consen  261 ---------QISKLSVVSTVIVTDLSCHPTMDDFITAT  289 (307)
T ss_pred             ---------eeeeeccCCceeEEeeecccCccceeEec
Confidence                     56677777777 89999999987777773

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=4.8e-31  Score=210.27  Aligned_cols=236  Identities=28%  Similarity=0.359  Sum_probs=195.3

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcE
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      +.++++|.++|++++|+|+      +++|++++.||.|++|++.+++.        ..+....+.+++..+++++.++.|
T Consensus         2 ~~~~~~h~~~i~~~~~~~~------~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i   75 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPD------GKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTI   75 (289)
T ss_pred             chHhcccCCCEEEEEEcCC------CCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence            3567799999999999998      89999999999999999987643        122244456666789999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      ++|++...+.  ...     +..+...+.++.|+|+++++++++.++.+.+ |+++.+....+..|...+.+++|+|++.
T Consensus        76 ~i~~~~~~~~--~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  148 (289)
T cd00200          76 RLWDLETGEC--VRT-----LTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGT  148 (289)
T ss_pred             EEEEcCcccc--eEE-----EeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCC
Confidence            9999987422  122     2256678999999999888888888999999 7777777777778899999999999999


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccc
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      ++++++.|+.|++||++..+....+..       +...+.+++|+|+++.+++++.|+.|++||+....           
T Consensus       149 ~l~~~~~~~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~-----------  210 (289)
T cd00200         149 FVASSSQDGTIKLWDLRTGKCVATLTG-------HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK-----------  210 (289)
T ss_pred             EEEEEcCCCcEEEEEccccccceeEec-------CccccceEEECCCcCEEEEecCCCcEEEEECCCCc-----------
Confidence            898888899999999997777666653       67789999999999999999999999999998753           


Q ss_pred             ceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        271 PEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .+..+..|...+.+++|+|++.++++++.     ||.|++|
T Consensus       211 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~i~i~  246 (289)
T cd00200         211 -CLGTLRGHENGVNSVAFSPDGYLLASGSE-----DGTIRVW  246 (289)
T ss_pred             -eecchhhcCCceEEEEEcCCCcEEEEEcC-----CCcEEEE
Confidence             45666678889999999999999988854     4449887

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.6e-30  Score=233.12  Aligned_cols=237  Identities=15%  Similarity=0.198  Sum_probs=186.0

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----c-----------cccccccCCC-CCceEEEEe
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----N-----------YLPYHMRDDS-KQLHLLSCS  106 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~-----------~~~~~~~~~~-~~~~l~~~~  106 (312)
                      +..|.+.|.+++|+|+      +++||+|+.|+.|+||+.....    .           ..+....+.+ .+.++++++
T Consensus       479 ~~~~~~~V~~i~fs~d------g~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~  552 (793)
T PLN00181        479 LLNSSNLVCAIGFDRD------GEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSN  552 (793)
T ss_pred             ccCCCCcEEEEEECCC------CCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEe
Confidence            3458999999999999      8999999999999999975321    0           0111122222 356899999


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      .||.|++||+.+.+  .+.     .+.+|...|.+++|+| ++.+|++|+.|+.|++ |+++......+.. ...+.++.
T Consensus       553 ~Dg~v~lWd~~~~~--~~~-----~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~-~~~v~~v~  624 (793)
T PLN00181        553 FEGVVQVWDVARSQ--LVT-----EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANICCVQ  624 (793)
T ss_pred             CCCeEEEEECCCCe--EEE-----EecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec-CCCeEEEE
Confidence            99999999998743  222     2347889999999997 7899999999999999 7776666666653 46789999


Q ss_pred             EC-CCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        185 FS-PDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       185 ~~-~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      |+ +++.+|++|+.||.|++||++... ....+..       |...|.++.|. ++.+|++++.|+.|++||+...... 
T Consensus       625 ~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~-------h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~-  695 (793)
T PLN00181        625 FPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIG-------HSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISG-  695 (793)
T ss_pred             EeCCCCCEEEEEeCCCeEEEEECCCCCccceEecC-------CCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccc-
Confidence            95 579999999999999999998755 2333333       88889999997 7889999999999999999754211 


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                           ..+.++..+.+|...+..++|+|++.+|++|+.|+     .|++|
T Consensus       696 -----~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~-----~v~iw  735 (793)
T PLN00181        696 -----INETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN-----EVFVY  735 (793)
T ss_pred             -----cCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCC-----EEEEE
Confidence                 11236778899999999999999999999995554     49998

>KOG1407|consensus

Probab=100.00  E-value=6.3e-31  Score=190.49  Aligned_cols=226  Identities=20%  Similarity=0.283  Sum_probs=188.6

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------ccccccCCCCCceEEEEeC
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~  107 (312)
                      +.+++|.+.|.+++|+.+      |..|++|+.|+++++|+++..+..             .+.+.+.+  ...+++++.
T Consensus        14 r~~~~~~~~v~Sv~wn~~------g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~--~d~~atas~   85 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCD------GTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH--PDLFATASG   85 (313)
T ss_pred             HHhhhhhhcceEEEEccc------CceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC--CcceEEecC
Confidence            567789999999999999      999999999999999999876431             23333333  448999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      |.+|++||++..+...  ...      ....-.-+.|+|+|.+++++..|..|.+ |.++.+.....+ ....+..++|+
T Consensus        86 dk~ir~wd~r~~k~~~--~i~------~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~  156 (313)
T KOG1407|consen   86 DKTIRIWDIRSGKCTA--RIE------TKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWN  156 (313)
T ss_pred             CceEEEEEeccCcEEE--Eee------ccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeec
Confidence            9999999999855332  222      1122234799999999999999999888 999998887776 56778889999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                      .++.+++.....|.|.|-.....+++..+..       |.....++.|+|+|+|||+|+.|-.+.+||+..--       
T Consensus       157 ~~nd~Fflt~GlG~v~ILsypsLkpv~si~A-------H~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi-------  222 (313)
T KOG1407|consen  157 NSNDLFFLTNGLGCVEILSYPSLKPVQSIKA-------HPSNCICIEFDPDGRYFATGSADALVSLWDVDELI-------  222 (313)
T ss_pred             CCCCEEEEecCCceEEEEecccccccccccc-------CCcceEEEEECCCCceEeeccccceeeccChhHhh-------
Confidence            8888888878889999999998888888776       88889999999999999999999999999998763       


Q ss_pred             ccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                           +++.+..+.-+|+.++||.||++||+||.|.
T Consensus       223 -----C~R~isRldwpVRTlSFS~dg~~lASaSEDh  253 (313)
T KOG1407|consen  223 -----CERCISRLDWPVRTLSFSHDGRMLASASEDH  253 (313)
T ss_pred             -----hheeeccccCceEEEEeccCcceeeccCccc
Confidence                 7788888999999999999999999995443

>KOG0306|consensus

Probab=100.00  E-value=1.6e-30  Score=213.45  Aligned_cols=185  Identities=22%  Similarity=0.313  Sum_probs=151.5

Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCce
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTI  180 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v  180 (312)
                      ++..+..+.+++|+..+  ..++.++.       ...+.+..|-|.++++++|...|.+.+ |+.+..+....++|.+.|
T Consensus       387 ~~~Sga~~SikiWn~~t--~kciRTi~-------~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaI  457 (888)
T KOG0306|consen  387 LLASGAGESIKIWNRDT--LKCIRTIT-------CGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAI  457 (888)
T ss_pred             eeeecCCCcEEEEEccC--cceeEEec-------cccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccce
Confidence            34444557788898887  44444443       236788999999999999999999999 999888888899999999


Q ss_pred             eEEEECCCCCEEEEEecCCeEEEEEccCC-----CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        181 TQLAFSPDDTHLVSVSRDRRWGLYKRQSS-----GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      .+++.+||+..+++|+.|.+|++||..-.     .+...+.............|.++.+||||++||.+--|++|+||-+
T Consensus       458 Wsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyfl  537 (888)
T KOG0306|consen  458 WSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFL  537 (888)
T ss_pred             eeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEe
Confidence            99999999999999999999999997531     1111122222223335677999999999999999999999999988


Q ss_pred             CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+-+            ..-.+.||.-||.+|..|||+++++|||.|..     |+||
T Consensus       538 DtlK------------FflsLYGHkLPV~smDIS~DSklivTgSADKn-----VKiW  577 (888)
T KOG0306|consen  538 DTLK------------FFLSLYGHKLPVLSMDISPDSKLIVTGSADKN-----VKIW  577 (888)
T ss_pred             ccee------------eeeeecccccceeEEeccCCcCeEEeccCCCc-----eEEe
Confidence            8763            67789999999999999999999999977776     9999

>KOG0289|consensus

Probab=100.00  E-value=1.5e-30  Score=201.02  Aligned_cols=251  Identities=16%  Similarity=0.232  Sum_probs=213.4

Q ss_pred             EEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCc
Q psy15191         29 AVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQL  100 (312)
Q Consensus        29 ~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~  100 (312)
                      .+.++...++.+..|+||...|+.+.|+|+      ...+++++.|..|+||.......        ..+.....++.+.
T Consensus       243 av~~d~~s~q~l~~~~Gh~kki~~v~~~~~------~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tge  316 (506)
T KOG0289|consen  243 AVLFDKPSNQILATLKGHTKKITSVKFHKD------LDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGE  316 (506)
T ss_pred             eEEEecchhhhhhhccCcceEEEEEEeccc------hhheeecCCcceEEeeccccccCccccccccccceeeeeccCCc
Confidence            456899999999999999999999999999      78899999999999999866554        2456667789999


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      +|++++.|+...+.|++++.........     ...-.+++.+|+|||..+.+|..|+.+++ |+++......|.+|.++
T Consensus       317 YllsAs~d~~w~Fsd~~~g~~lt~vs~~-----~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~  391 (506)
T KOG0289|consen  317 YLLSASNDGTWAFSDISSGSQLTVVSDE-----TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGP  391 (506)
T ss_pred             EEEEecCCceEEEEEccCCcEEEEEeec-----cccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCc
Confidence            9999999999999999986654433322     23456899999999999999999999999 88877778889999999


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |..++|+.+|.+|++++.|+.|++||+|..+.+..+...      ....+.++.|.+.|.+|+.++.|=.|++++  .. 
T Consensus       392 vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~------~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~--k~-  462 (506)
T KOG0289|consen  392 VKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLD------EKKEVNSLSFDQSGTYLGIAGSDLQVYICK--KK-  462 (506)
T ss_pred             eeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecc------ccccceeEEEcCCCCeEEeecceeEEEEEe--cc-
Confidence            999999999999999999999999999998877777654      334689999999999999997765555554  32 


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                             .+.|.++..+..|.+..+.+.|....++++++|.|..     +++
T Consensus       463 -------~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~-----l~~  502 (506)
T KOG0289|consen  463 -------TKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAI-----LRL  502 (506)
T ss_pred             -------cccceeeehhhhcccccceeeecccceEEeeccchhh-----eEE
Confidence                   4568899999999999999999999999999976655     766

>KOG0305|consensus

Probab=100.00  E-value=2.2e-30  Score=209.54  Aligned_cols=242  Identities=20%  Similarity=0.305  Sum_probs=203.1

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHL  102 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l  102 (312)
                      |+..+++.......+...|+++.|+++      |.+|+.|..+|.|.|||....+..         .+....+.  +..+
T Consensus       202 W~~~s~~v~~l~~~~~~~vtSv~ws~~------G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~l  273 (484)
T KOG0305|consen  202 WSASSGSVTELCSFGEELVTSVKWSPD------GSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVL  273 (484)
T ss_pred             EecCCCceEEeEecCCCceEEEEECCC------CCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceE
Confidence            999989877777766899999999999      999999999999999998776552         22233333  4488


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~  181 (312)
                      .+|+.++.|..+|++..+....      .+.+|...|..++|+++++++++|+.|+.+.+ |.........+..|...|.
T Consensus       274 ssGsr~~~I~~~dvR~~~~~~~------~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVK  347 (484)
T KOG0305|consen  274 SSGSRDGKILNHDVRISQHVVS------TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVK  347 (484)
T ss_pred             EEecCCCcEEEEEEecchhhhh------hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeee
Confidence            9999999999999997543322      24589999999999999999999999999999 6655566777779999999


Q ss_pred             EEEECC-CCCEEEEE--ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe--ccCCeEEEEecC
Q psy15191        182 QLAFSP-DDTHLVSV--SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI--SRDGVCVVWGLG  256 (312)
Q Consensus       182 ~~~~~~-~~~~l~~~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~iwd~~  256 (312)
                      .++|+| ....||+|  +.|+.|++||..++..+..+.        ....|..+.|++..+-|+++  ..++.|.||++.
T Consensus       348 A~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd--------tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~p  419 (484)
T KOG0305|consen  348 ALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD--------TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYP  419 (484)
T ss_pred             EeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc--------cCCceeeEEEcCCCCEEEEecCCCCCcEEEEecc
Confidence            999999 66788886  479999999999888887766        66789999999998766654  467799999998


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..            .+..+.+|...|..++++|||..+++|+.|.+     +++|
T Consensus       420 s~~------------~~~~l~gH~~RVl~la~SPdg~~i~t~a~DET-----lrfw  458 (484)
T KOG0305|consen  420 SMK------------LVAELLGHTSRVLYLALSPDGETIVTGAADET-----LRFW  458 (484)
T ss_pred             ccc------------eeeeecCCcceeEEEEECCCCCEEEEecccCc-----EEec
Confidence            753            68889999999999999999999999966666     9999

>KOG0283|consensus

Probab=99.98  E-value=1.8e-30  Score=215.70  Aligned_cols=236  Identities=22%  Similarity=0.282  Sum_probs=180.2

Q ss_pred             EEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------------------------
Q psy15191         40 LYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------------------------   87 (312)
Q Consensus        40 ~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------------------------   87 (312)
                      .+.+. .|.+.|+++.|+++      |+|||+||.|+.|+||.+...+.                               
T Consensus       259 ~Qe~~~ah~gaIw~mKFS~D------GKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~  332 (712)
T KOG0283|consen  259 VQEISNAHKGAIWAMKFSHD------GKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKI  332 (712)
T ss_pred             eeccccccCCcEEEEEeCCC------CceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccc
Confidence            34556 89999999999999      99999999999999998766110                               


Q ss_pred             -------------------------------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec
Q psy15191         88 -------------------------------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG  130 (312)
Q Consensus        88 -------------------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  130 (312)
                                                           ..+.-+.++ .+.+|++++.|.+|++|++...  .++..+   
T Consensus       333 ~~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS-Kn~fLLSSSMDKTVRLWh~~~~--~CL~~F---  406 (712)
T KOG0283|consen  333 SSRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWS-KNNFLLSSSMDKTVRLWHPGRK--ECLKVF---  406 (712)
T ss_pred             cccccccccccCCccccCCCccccccccchhhhhccchhheecccc-cCCeeEeccccccEEeecCCCc--ceeeEE---
Confidence                                                 011111122 3448999999999999999974  444444   


Q ss_pred             ccCCCccceeEEEECC-CCCeEEEeecCCeEEEecccCceeeeec----ccCCceeEEEECCCCCEEEEEecCCeEEEEE
Q psy15191        131 EVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHLDVTTWKQIQTLP----CHQLTITQLAFSPDDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd  205 (312)
                         .|..-|+|++|+| |.+++++|+-|+.++|    |.+....-    .-..-|+.++|.|||++.+.|+.+|.+++|+
T Consensus       407 ---~HndfVTcVaFnPvDDryFiSGSLD~KvRi----WsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~  479 (712)
T KOG0283|consen  407 ---SHNDFVTCVAFNPVDDRYFISGSLDGKVRL----WSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYD  479 (712)
T ss_pred             ---ecCCeeEEEEecccCCCcEeecccccceEE----eecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEE
Confidence               4888899999999 8899999999999999    76654322    3347899999999999999999999999999


Q ss_pred             ccCCCeEEEEeccCC--CCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCc-
Q psy15191        206 RQSSGRLSLVACSDK--TNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY-  281 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-  281 (312)
                      ....+..........  +...+. .|+++.|.|... .++..+.|..|||||.+...            .+.++.|+.. 
T Consensus       480 t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~------------lv~KfKG~~n~  546 (712)
T KOG0283|consen  480 TEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD------------LVHKFKGFRNT  546 (712)
T ss_pred             ccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchh------------hhhhhcccccC
Confidence            997665544433222  222244 899999997543 47777899999999996653            5666665432 


Q ss_pred             -ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        282 -EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       282 -~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .=....|+.||++|++++.|..     |+||
T Consensus       547 ~SQ~~Asfs~Dgk~IVs~seDs~-----VYiW  573 (712)
T KOG0283|consen  547 SSQISASFSSDGKHIVSASEDSW-----VYIW  573 (712)
T ss_pred             CcceeeeEccCCCEEEEeecCce-----EEEE
Confidence             2356789999999999965555     9999

>KOG0313|consensus

Probab=99.98  E-value=9.5e-30  Score=193.41  Aligned_cols=251  Identities=22%  Similarity=0.334  Sum_probs=199.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQ   99 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~   99 (312)
                      |+. .|+.+..+.||.++|.+++|...   ++....|++++.|.++++|.++.++.            ..+......+++
T Consensus       130 Wd~-~Gk~~~~~~Ght~~ik~v~~v~~---n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg  205 (423)
T KOG0313|consen  130 WDL-KGKSIKTIVGHTGPIKSVAWVIK---NSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG  205 (423)
T ss_pred             Eec-CCceEEEEecCCcceeeeEEEec---CCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCC
Confidence            776 48899999999999998888655   12234699999999999999987765            133444446788


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcce------------------eeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEE
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGL------------------WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH  161 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~  161 (312)
                      ..+++|+.|.+|++|+..+....                  .....+...+.+|..+|.++.|++ ...+++++.|.+|+
T Consensus       206 tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk  284 (423)
T KOG0313|consen  206 TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIK  284 (423)
T ss_pred             CeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEE
Confidence            89999999999999993322111                  111223344578999999999988 77899999999999


Q ss_pred             E-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE---EEEeccCCCCcccceeeEEEEEcCC
Q psy15191        162 L-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL---SLVACSDKTNGVHKRIIWGVAWSHD  237 (312)
Q Consensus       162 ~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~  237 (312)
                      . |+.+......+. .+..++++.++|..++|++|+.|..|++||.+++.-.   +.+.+       |...|.++.|+|.
T Consensus       285 ~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~g-------H~nwVssvkwsp~  356 (423)
T KOG0313|consen  285 VWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIG-------HKNWVSSVKWSPT  356 (423)
T ss_pred             EEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeec-------chhhhhheecCCC
Confidence            9 666666666665 5678999999999999999999999999999976432   22333       8899999999997


Q ss_pred             Cc-eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        238 SR-YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       238 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .. .|++++.|+++++||++....           +++.+.+|...|.++.|+ ++.+|++||.|++     |+|+
T Consensus       357 ~~~~~~S~S~D~t~klWDvRS~k~-----------plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~-----l~i~  415 (423)
T KOG0313|consen  357 NEFQLVSGSYDNTVKLWDVRSTKA-----------PLYDIAGHNDKVLSVDWN-EGGLIVSGGADNK-----LRIF  415 (423)
T ss_pred             CceEEEEEecCCeEEEEEeccCCC-----------cceeeccCCceEEEEecc-CCceEEeccCcce-----EEEe
Confidence            65 678999999999999998753           789999999999999996 5678999976666     9874

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.98  E-value=3.6e-29  Score=224.47  Aligned_cols=265  Identities=19%  Similarity=0.193  Sum_probs=192.1

Q ss_pred             ccCCCceEEEEEeCCCCce--------EEEEc------------------cccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191         21 TNHKSKVMAVKWNGEGGKV--------LYTLT------------------NHKSKVMAVKWVLNTSLDPEHKDLVSCSLD   74 (312)
Q Consensus        21 ~~h~~~v~~~~w~~~~~~~--------~~~~~------------------~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d   74 (312)
                      ..|.+.|.+++|++++...        ++.+.                  .+...|.+++|++.     ++.+|++++.|
T Consensus       480 ~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~~las~~~D  554 (793)
T PLN00181        480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSY-----IKSQVASSNFE  554 (793)
T ss_pred             cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccC-----CCCEEEEEeCC
Confidence            3488899999988765211        11111                  12356888999874     26789999999


Q ss_pred             CcEEEeeecCCccc--------ccccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         75 KTAILWKYVSEGNY--------LPYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        75 g~i~vw~~~~~~~~--------~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      |+|++||+.+++..        .+..+.+++ ++.+|++++.|+.|++||+++..  ......      +...+.++.|+
T Consensus       555 g~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~--~~~~~~------~~~~v~~v~~~  626 (793)
T PLN00181        555 GVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV--SIGTIK------TKANICCVQFP  626 (793)
T ss_pred             CeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc--EEEEEe------cCCCeEEEEEe
Confidence            99999999876542        233444453 56799999999999999998743  222222      22468899995


Q ss_pred             -CCCCeEEEeecCCeEEE-ecccCc-eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC------CeEEEEe
Q psy15191        146 -PRGDYIIAHGFQGSLHL-DVTTWK-QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS------GRLSLVA  216 (312)
Q Consensus       146 -~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~------~~~~~~~  216 (312)
                       +++.++++|+.||.|++ |+++.+ ....+.+|...|.++.|. ++.+|++++.|+.|++||++..      ..+..+.
T Consensus       627 ~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~  705 (793)
T PLN00181        627 SESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFM  705 (793)
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEc
Confidence             57999999999999999 665544 344566899999999997 7889999999999999999753      2334444


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccccee--EEeeccCcceeEEEeccCCCe
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV--QKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~  294 (312)
                      +       |...+..++|+|++++|++|+.|+.|++|+............... ..+  .....|...|.+++|+|++.+
T Consensus       706 g-------h~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~-~~~~~~~~~~~~~~V~~v~ws~~~~~  777 (793)
T PLN00181        706 G-------HTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTI-DPVSGLEVDDASQFISSVCWRGQSST  777 (793)
T ss_pred             C-------CCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccC-CcccccccCCCCcEEEEEEEcCCCCe
Confidence            3       777889999999999999999999999999765432110000000 001  112345678999999999999


Q ss_pred             EEEEecCCCcccceEEeC
Q psy15191        295 LASACKATKPEHAAIIIW  312 (312)
Q Consensus       295 l~s~s~d~~~~dg~i~iW  312 (312)
                      |++|+.||     .|+||
T Consensus       778 lva~~~dG-----~I~i~  790 (793)
T PLN00181        778 LVAANSTG-----NIKIL  790 (793)
T ss_pred             EEEecCCC-----cEEEE
Confidence            99995555     49998

>KOG0276|consensus

Probab=99.98  E-value=4.4e-30  Score=206.93  Aligned_cols=239  Identities=16%  Similarity=0.197  Sum_probs=201.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~  103 (312)
                      |+.++...++.+.-..-+|.+..|.+.      .+++++|+.|..|+||+..+.+.+.        +.....+|...+++
T Consensus        40 WnyetqtmVksfeV~~~PvRa~kfiaR------knWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vL  113 (794)
T KOG0276|consen   40 WNYETQTMVKSFEVSEVPVRAAKFIAR------KNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVL  113 (794)
T ss_pred             Eecccceeeeeeeecccchhhheeeec------cceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEE
Confidence            999999999999988999999999998      8899999999999999999988742        33444467777999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~  181 (312)
                      +++.|-+|++||.+..   +   .....+.+|...|.+++|+| |.+.+++++-|++|++ .+.+-....++++|...|+
T Consensus       114 tsSDDm~iKlW~we~~---w---a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN  187 (794)
T KOG0276|consen  114 TSSDDMTIKLWDWENE---W---ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVN  187 (794)
T ss_pred             ecCCccEEEEeeccCc---e---eeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcc
Confidence            9999999999999852   1   22234469999999999999 6788999999999999 4444445567779999999


Q ss_pred             EEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        182 QLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       182 ~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ++.+-+  |..+|++|+.|..|++||..+..+++++.+       |...|..+.|+|.-.++++|++||+++||+-.+-.
T Consensus       188 ~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeG-------Ht~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~  260 (794)
T KOG0276|consen  188 CVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEG-------HTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK  260 (794)
T ss_pred             eEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhc-------ccccceEEEecCCCcEEEEecCCccEEEecCccee
Confidence            999988  446999999999999999999999998888       88889999999999999999999999999876653


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                                  ....+...-..|.+++-.+.+..++.|.+.
T Consensus       261 ------------lE~tLn~gleRvW~I~~~k~~~~i~vG~De  290 (794)
T KOG0276|consen  261 ------------LEKTLNYGLERVWCIAAHKGDGKIAVGFDE  290 (794)
T ss_pred             ------------hhhhhhcCCceEEEEeecCCCCeEEEeccC
Confidence                        233344455778899888888888888433

>KOG0278|consensus

Probab=99.97  E-value=9e-31  Score=188.74  Aligned_cols=228  Identities=16%  Similarity=0.221  Sum_probs=188.5

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      +-+-+.++|..+-++.+|++.|+...                   |+.-+|..+.+|. |...|..++|+.+      .+
T Consensus        41 pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~d------s~  113 (334)
T KOG0278|consen   41 PMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQD------SN  113 (334)
T ss_pred             chhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEeccc------ch
Confidence            34678899999999999999998776                   7777788888886 8889999999998      88


Q ss_pred             eEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC
Q psy15191         67 DLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG  134 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  134 (312)
                      +|+||+.+..++|+|++..+.            ..+.|+.   ....+++.+.|++|++||.++++..  ..+.      
T Consensus       114 ~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~---eD~~iLSSadd~tVRLWD~rTgt~v--~sL~------  182 (334)
T KOG0278|consen  114 YLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH---EDKCILSSADDKTVRLWDHRTGTEV--QSLE------  182 (334)
T ss_pred             hhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec---cCceEEeeccCCceEEEEeccCcEE--EEEe------
Confidence            999999999999999987654            1233333   2337888899999999999995533  3332      


Q ss_pred             CccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL  214 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  214 (312)
                      ...+|.++.++++|+++.++...+...+|..+..+++... ....|.+..++|+...+++|++|..++.||..++..+..
T Consensus       183 ~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~  261 (334)
T KOG0278|consen  183 FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGS  261 (334)
T ss_pred             cCCCCcceeeccCCCEEEEecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeee
Confidence            3467899999999998777655444444888888887776 567799999999999999999999999999999988877


Q ss_pred             E-eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        215 V-ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       215 ~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      + ++       |.++|.++.|+|+|...++||+||+|++|.+..+.
T Consensus       262 ~nkg-------h~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  262 YNKG-------HFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             cccC-------CCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence            4 33       88999999999999999999999999999887654

>KOG0277|consensus

Probab=99.97  E-value=7.5e-30  Score=184.30  Aligned_cols=240  Identities=18%  Similarity=0.249  Sum_probs=187.8

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------cccccccCCC-CCceEEEEe
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------YLPYHMRDDS-KQLHLLSCS  106 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------~~~~~~~~~~-~~~~l~~~~  106 (312)
                      -+....+. -.+.+..++|++.    . ...+++++.||++++||+.....         ..+..+.+++ ....+++++
T Consensus        51 i~e~~s~d-~~D~LfdV~Wse~----~-e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS  124 (311)
T KOG0277|consen   51 IQECQSYD-TEDGLFDVAWSEN----H-ENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS  124 (311)
T ss_pred             eEEEEeee-cccceeEeeecCC----C-cceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeec
Confidence            34444444 4678999999997    3 46889999999999999654332         1333333332 445688889


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      .|++|++|+...+..  +.+     +.+|..-|+..+|+| .++.+++++.|+.+++ |++.-.....++.|...|.++.
T Consensus       125 WD~TiKLW~~~r~~S--v~T-----f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cd  197 (311)
T KOG0277|consen  125 WDGTIKLWDPNRPNS--VQT-----FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCD  197 (311)
T ss_pred             cCCceEeecCCCCcc--eEe-----ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeec
Confidence            999999999987443  233     458999999999999 6788999999999999 5554444445778999999999


Q ss_pred             ECC-CCCEEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCC
Q psy15191        185 FSP-DDTHLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       185 ~~~-~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      |+. +.+.++||+.|+.|+.||+++.+. +..+.+       |.-.|..++|||.. .+||+++.|-+++|||...+.. 
T Consensus       198 w~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~g-------h~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds-  269 (311)
T KOG0277|consen  198 WSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNG-------HGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDS-  269 (311)
T ss_pred             ccccCCcEEEecCCCceEEEEehhhccccceeecC-------CceEEEEEecCcchhhHhhhccccceEEecccccchh-
Confidence            998 778999999999999999997653 333333       89999999999965 5889999999999999986643 


Q ss_pred             cccccccccceeEEeeccCcceeEEEecc-CCCeEEEEecCCCcccceEEeC
Q psy15191        262 EDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                .+.+...|..-|..+.||+ ++.++|+.+.|..     ++||
T Consensus       270 ----------~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~-----l~Vw  306 (311)
T KOG0277|consen  270 ----------AIETVDHHTEFVCGLDWSLFDPGQVASTGWDEL-----LYVW  306 (311)
T ss_pred             ----------hhhhhhccceEEeccccccccCceeeecccccc-----eeee
Confidence                      5566678999999999997 4678999977777     9998

>KOG0292|consensus

Probab=99.97  E-value=6.9e-30  Score=213.35  Aligned_cols=248  Identities=19%  Similarity=0.303  Sum_probs=203.1

Q ss_pred             CCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------cccccc
Q psy15191         23 HKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMR   94 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~   94 (312)
                      |++.| .+ ||.+-+.++..|.+|.++|..+.|+|.      +.+++||+.|-.|+||+..+.+++        .+....
T Consensus        29 HsG~I-Ql-WDYRM~tli~rFdeHdGpVRgv~FH~~------qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~  100 (1202)
T KOG0292|consen   29 HSGVI-QL-WDYRMGTLIDRFDEHDGPVRGVDFHPT------QPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVF  100 (1202)
T ss_pred             cCcee-ee-ehhhhhhHHhhhhccCCccceeeecCC------CCeEEecCCccEEEEEecccceehhhhccccceeEEee
Confidence            55554 33 999999999999999999999999999      899999999999999999998873        223333


Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce----
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ----  169 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~----  169 (312)
                      +++.-..++++|.|.+|+||+..+.+..  ...     .+|...|.|..|+|....+++++-|.+|++ |+.-.+.    
T Consensus       101 FHheyPWIlSASDDQTIrIWNwqsr~~i--avl-----tGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~  173 (1202)
T KOG0292|consen  101 FHHEYPWILSASDDQTIRIWNWQSRKCI--AVL-----TGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKA  173 (1202)
T ss_pred             ccCCCceEEEccCCCeEEEEeccCCceE--EEE-----ecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCC
Confidence            4555558999999999999999985543  333     389999999999999999999999999999 3321110    


Q ss_pred             -------------------------eeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc
Q psy15191        170 -------------------------IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV  224 (312)
Q Consensus       170 -------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~  224 (312)
                                               ...+.+|...|+-++|+|.-..+++|+.|+.|++|.+...+....-.+     ..
T Consensus       174 pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtc-----rg  248 (1202)
T KOG0292|consen  174 PGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTC-----RG  248 (1202)
T ss_pred             CCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhh-----hc
Confidence                                     011238999999999999999999999999999999987665433222     22


Q ss_pred             cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      |...|.++-|+|...++++.++|+.|+|||+....            .++.+......-+.++-+|..+++|+|.+.|
T Consensus       249 H~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt------------~v~tfrrendRFW~laahP~lNLfAAgHDsG  314 (1202)
T KOG0292|consen  249 HYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRT------------SVQTFRRENDRFWILAAHPELNLFAAGHDSG  314 (1202)
T ss_pred             ccCCcceEEecCccceeEecCCCccEEEEeccccc------------ceeeeeccCCeEEEEEecCCcceeeeecCCc
Confidence            88899999999999999999999999999998774            5777777777888999999999988885444

>KOG0316|consensus

Probab=99.97  E-value=5e-30  Score=183.32  Aligned_cols=233  Identities=19%  Similarity=0.254  Sum_probs=189.7

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCc
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      .+..+.+|+++|..+.|+-+      |+|.++|+.|.+|++|+...+.++.        +.-.+...++..+++|+.|+.
T Consensus         9 r~~~l~~~qgaV~avryN~d------GnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~   82 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVD------GNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA   82 (307)
T ss_pred             hceeecccccceEEEEEccC------CCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence            45678899999999999998      9999999999999999998877643        333344567778999999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc--cCceeeeecccCCceeEEEECC
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT--TWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      +.+||+.+++  ...++     .+|...|+.++|+.+...+++|+.|..+++ |.+  +.++++.+......|.++..+ 
T Consensus        83 v~vwDV~TGk--v~Rr~-----rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-  154 (307)
T KOG0316|consen   83 VQVWDVNTGK--VDRRF-----RGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-  154 (307)
T ss_pred             EEEEEcccCe--eeeec-----ccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec-
Confidence            9999999944  33333     489999999999999999999999999999 332  233444455667789999885 


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                       +..+++|+.||+++.||++.++...-+         ...+|++++|+++++..+.++.|+.+++.|-.++.        
T Consensus       155 -~heIvaGS~DGtvRtydiR~G~l~sDy---------~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGk--------  216 (307)
T KOG0316|consen  155 -EHEIVAGSVDGTVRTYDIRKGTLSSDY---------FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGK--------  216 (307)
T ss_pred             -ccEEEeeccCCcEEEEEeecceeehhh---------cCCcceeEEecCCCCEEEEeeccceeeecccchhH--------
Confidence             567999999999999999977654322         45679999999999999999999999999988874        


Q ss_pred             cccceeEEeeccCccee--EEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLYGHGYEIY--SLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~--~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          .+..+.+|...-+  ..+++.....+++|     +|||-|++|
T Consensus       217 ----lL~sYkGhkn~eykldc~l~qsdthV~sg-----SEDG~Vy~w  254 (307)
T KOG0316|consen  217 ----LLKSYKGHKNMEYKLDCCLNQSDTHVFSG-----SEDGKVYFW  254 (307)
T ss_pred             ----HHHHhcccccceeeeeeeecccceeEEec-----cCCceEEEE
Confidence                6778888876533  45677777899999     555559998

>KOG0292|consensus

Probab=99.97  E-value=5.1e-30  Score=214.13  Aligned_cols=243  Identities=18%  Similarity=0.202  Sum_probs=201.6

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      .|...+..|..++|+|.      ..+++++--.|.|++||.+-+.++        .+.-..+++.+.++++|+.|-.|++
T Consensus         4 kfEskSsRvKglsFHP~------rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkV   77 (1202)
T KOG0292|consen    4 KFESKSSRVKGLSFHPK------RPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKV   77 (1202)
T ss_pred             hhhcccccccceecCCC------CCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEE
Confidence            34556778999999999      889999999999999999877653        3444556777779999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEE
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHL  192 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  192 (312)
                      |+..+  ..++.+.     .+|-..|..+.|++.-.+++++++|.+|++ +-.+.+.+..+.+|.-.|+|..|+|....+
T Consensus        78 WnYk~--rrclftL-----~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlI  150 (1202)
T KOG0292|consen   78 WNYKT--RRCLFTL-----LGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLI  150 (1202)
T ss_pred             Eeccc--ceehhhh-----ccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceE
Confidence            99987  4444444     489999999999999999999999999999 666677888889999999999999999999


Q ss_pred             EEEecCCeEEEEEccCCCeEEEEec-----------------c-----CCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        193 VSVSRDRRWGLYKRQSSGRLSLVAC-----------------S-----DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       193 ~~~~~d~~i~~wd~~~~~~~~~~~~-----------------~-----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                      +++|.|.+||+||+...+......+                 .     ......|...|+-++|+|.-.++++|+.|..|
T Consensus       151 VSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqV  230 (1202)
T KOG0292|consen  151 VSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQV  230 (1202)
T ss_pred             EEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCccee
Confidence            9999999999999875322211111                 0     00112288899999999999999999999999


Q ss_pred             EEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++|.+...         +.| .+.+..+|.+.|.++-|+|..+++++.     +||++|+||
T Consensus       231 KlWrmnet---------KaW-EvDtcrgH~nnVssvlfhp~q~lIlSn-----sEDksirVw  277 (1202)
T KOG0292|consen  231 KLWRMNET---------KAW-EVDTCRGHYNNVSSVLFHPHQDLILSN-----SEDKSIRVW  277 (1202)
T ss_pred             eEEEeccc---------cce-eehhhhcccCCcceEEecCccceeEec-----CCCccEEEE
Confidence            99998764         334 567788999999999999999999999     666669999

>KOG0281|consensus

Probab=99.97  E-value=1.6e-30  Score=195.93  Aligned_cols=232  Identities=20%  Similarity=0.348  Sum_probs=190.5

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      -+||+.++-.+++.+.||++.|.|+.                 |+.++|+++.++-+|...|..+.|+..        ++
T Consensus       219 ikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng--------~m  290 (499)
T KOG0281|consen  219 IKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNG--------YM  290 (499)
T ss_pred             eEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCC--------EE
Confidence            36899999999999999999999997                 999999999999999999999999765        99


Q ss_pred             EEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         69 VSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      +|++.|.+|.+||+......           .+....+  +..++++++.|++|++|++.+  +.++.++     .+|..
T Consensus       291 vtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdf--d~kyIVsASgDRTikvW~~st--~efvRtl-----~gHkR  361 (499)
T KOG0281|consen  291 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTST--CEFVRTL-----NGHKR  361 (499)
T ss_pred             EEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecc--ccceEEEecCCceEEEEeccc--eeeehhh-----hcccc
Confidence            99999999999999876541           2222223  334999999999999999998  4444444     38888


Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      .|.|+.+  .++++++|+.|.+|++ |...+.+...+++|..-|.++.|  |.+.+++|+.||+|++||+..........
T Consensus       362 GIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~  437 (499)
T KOG0281|consen  362 GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPA  437 (499)
T ss_pred             cceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee--cCceeeeccccceEEEEecccccCCcccc
Confidence            8877776  5899999999999999 88888888889999999999999  46789999999999999998754432221


Q ss_pred             ccC--CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        217 CSD--KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       217 ~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      ...  .....|.+.|..+.|  |...+++++.|.+|.|||+..+..
T Consensus       438 ~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  438 STLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPP  481 (499)
T ss_pred             cchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCc
Confidence            111  011128889999999  567899999999999999988753

>KOG0282|consensus

Probab=99.97  E-value=8.9e-31  Score=204.70  Aligned_cols=217  Identities=21%  Similarity=0.318  Sum_probs=180.5

Q ss_pred             CeEEEEeccCCCceEEEEEeCCC---------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEG---------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS   72 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~---------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~   72 (312)
                      -+.+.++.+|+..|.++.|-+..                     +++++++.+|..+|..++|+++      |..++|+|
T Consensus       204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~------g~~fLS~s  277 (503)
T KOG0282|consen  204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNC------GTSFLSAS  277 (503)
T ss_pred             HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhcccc------CCeeeeee
Confidence            45778899999999988855522                     7889999999999999999999      99999999


Q ss_pred             CCCcEEEeeecCCccc-------ccccccCCCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         73 LDKTAILWKYVSEGNY-------LPYHMRDDSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        73 ~dg~i~vw~~~~~~~~-------~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      .|+.|++||+++|++.       .+.+..++|++ ..+++|+.|+.|+.||+++++       .+.+...|-+.|..+.|
T Consensus       278 fD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k-------vvqeYd~hLg~i~~i~F  350 (503)
T KOG0282|consen  278 FDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK-------VVQEYDRHLGAILDITF  350 (503)
T ss_pred             cceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH-------HHHHHHhhhhheeeeEE
Confidence            9999999999999873       34444555655 689999999999999999855       22334578888999999


Q ss_pred             CCCCCeEEEeecCCeEEEecccCceeee---------------------------------------------------e
Q psy15191        145 GPRGDYIIAHGFQGSLHLDVTTWKQIQT---------------------------------------------------L  173 (312)
Q Consensus       145 ~~~~~~l~~~~~~~~i~~d~~~~~~~~~---------------------------------------------------~  173 (312)
                      -++++++++.++|+.+++    |+....                                                   +
T Consensus       351 ~~~g~rFissSDdks~ri----We~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~f  426 (503)
T KOG0282|consen  351 VDEGRRFISSSDDKSVRI----WENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRF  426 (503)
T ss_pred             ccCCceEeeeccCccEEE----EEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhh
Confidence            999999999999999999    542211                                                   0


Q ss_pred             ccc--CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeE
Q psy15191        174 PCH--QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVC  250 (312)
Q Consensus       174 ~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i  250 (312)
                      .+|  .+.-..+.|||||.+|++|..||.+.+||.++.+.+..+..       |..++..+.|+|.. ..+|+++.||.|
T Consensus       427 eGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka-------h~~~ci~v~wHP~e~Skvat~~w~G~I  499 (503)
T KOG0282|consen  427 EGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA-------HDQPCIGVDWHPVEPSKVATCGWDGLI  499 (503)
T ss_pred             cceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc-------CCcceEEEEecCCCcceeEecccCcee
Confidence            133  23456789999999999999999999999999888877776       88899999999965 579999999999


Q ss_pred             EEEe
Q psy15191        251 VVWG  254 (312)
Q Consensus       251 ~iwd  254 (312)
                      ++||
T Consensus       500 kiwd  503 (503)
T KOG0282|consen  500 KIWD  503 (503)
T ss_pred             EecC
Confidence            9996

>KOG0268|consensus

Probab=99.97  E-value=3.6e-30  Score=194.68  Aligned_cols=257  Identities=16%  Similarity=0.244  Sum_probs=193.4

Q ss_pred             EEEEeccCCCceEEEE--------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191         16 VLYTLTNHKSKVMAVK--------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK   75 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~--------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg   75 (312)
                      .+..|.||.+.|.|++                    ||.....++.+|+.|.+.|..|++...        .+++++.|.
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~--------~~~tvgdDK  129 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQT--------SFFTVGDDK  129 (433)
T ss_pred             chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEeccc--------ceEEecCCc
Confidence            3456788888888887                    898888999999999999999998654        789999999


Q ss_pred             cEEEeeecCCcccc------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-
Q psy15191         76 TAILWKYVSEGNYL------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-  148 (312)
Q Consensus        76 ~i~vw~~~~~~~~~------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-  148 (312)
                      +|+.|.++......      ..-......+..+++|+.  .|.|||.....+       +..+.-....+.++.|+|.. 
T Consensus       130 tvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~P-------v~smswG~Dti~svkfNpvET  200 (433)
T KOG0268|consen  130 TVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNP-------VSSMSWGADSISSVKFNPVET  200 (433)
T ss_pred             ceeeeeccCCcceeeeccccccccccccccccccccCc--eeeecccccCCc-------cceeecCCCceeEEecCCCcc
Confidence            99999976642210      001111223346666664  589999876332       22233445678999999965 


Q ss_pred             CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccce
Q psy15191        149 DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR  227 (312)
Q Consensus       149 ~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~  227 (312)
                      ..|++|+.|+.|.+ |+++..+++... ....-+.|+|+|.+-.|+++++|..++.||++..........      .|..
T Consensus       201 sILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~------dhvs  273 (433)
T KOG0268|consen  201 SILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHK------DHVS  273 (433)
T ss_pred             hheeeeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhc------ccce
Confidence            45667779999999 888888777665 445667899999888899999999999999997544322221      2889


Q ss_pred             eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccc
Q psy15191        228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHA  307 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg  307 (312)
                      .|.+++|+|.|+-+++||.|.+|+||....+.+......           .--..|.++.||.|.+++++||     +|+
T Consensus       274 AV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYht-----------kRMq~V~~Vk~S~Dskyi~SGS-----dd~  337 (433)
T KOG0268|consen  274 AVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHT-----------KRMQHVFCVKYSMDSKYIISGS-----DDG  337 (433)
T ss_pred             eEEEeccCCCcchhccccccceEEEeecCCCcchhhhhH-----------hhhheeeEEEEeccccEEEecC-----CCc
Confidence            999999999999999999999999999988754321100           1134689999999999999995     555


Q ss_pred             eEEeC
Q psy15191        308 AIIIW  312 (312)
Q Consensus       308 ~i~iW  312 (312)
                      .|++|
T Consensus       338 nvRlW  342 (433)
T KOG0268|consen  338 NVRLW  342 (433)
T ss_pred             ceeee
Confidence            59999

>KOG0264|consensus

Probab=99.97  E-value=7.1e-29  Score=192.74  Aligned_cols=249  Identities=18%  Similarity=0.240  Sum_probs=187.3

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------------------ccccccCCCCCceEE
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------------------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------------------~~~~~~~~~~~~~l~  103 (312)
                      .|.+.|+.+++.|.     +..++|+.+..+.|.|||.......                     .+.|..  .....++
T Consensus       122 ~h~gEVnRaRymPQ-----np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~--~~~g~Ll  194 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQ-----NPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNR--QQEGTLL  194 (422)
T ss_pred             cCCccchhhhhCCC-----CCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccc--ccceeEe
Confidence            58999999999998     3467888899999999998654321                     111111  1223799


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-eccc--CceeeeecccCCc
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTT--WKQIQTLPCHQLT  179 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~--~~~~~~~~~~~~~  179 (312)
                      +++.|++|.+||+...........+...+.+|...|..++|++ ....+++++.|+.+.| |+++  -+......+|.+.
T Consensus       195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~  274 (422)
T KOG0264|consen  195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAE  274 (422)
T ss_pred             eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCc
Confidence            9999999999999864432222233445568999999999999 5567888999999999 7774  3334445589999


Q ss_pred             eeEEEECC-CCCEEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecC
Q psy15191        180 ITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       180 v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~  256 (312)
                      |.+++|+| ++..||||+.|++|.+||+|+... +..+..       |+..|..|.|+|.. ..||+++.|+.+.|||+.
T Consensus       275 vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~-------H~dev~~V~WSPh~etvLASSg~D~rl~vWDls  347 (422)
T KOG0264|consen  275 VNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEG-------HEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS  347 (422)
T ss_pred             eeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccC-------CCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence            99999999 677889999999999999998654 333333       99999999999975 578899999999999997


Q ss_pred             CCCCCcccc--cccccceeEEeeccCcceeEEEeccCCCeE-EEEecCCCcccceEEeC
Q psy15191        257 EPPTEEDLV--QNTLWPEVQKLYGHGYEIYSLAASHDGTLL-ASACKATKPEHAAIIIW  312 (312)
Q Consensus       257 ~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~s~d~~~~dg~i~iW  312 (312)
                      .-.......  ...--+++..-.||...|..+.|+|+..++ ++.     ++|+.+.||
T Consensus       348 ~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sv-----aeDN~LqIW  401 (422)
T KOG0264|consen  348 RIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASV-----AEDNILQIW  401 (422)
T ss_pred             ccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEe-----cCCceEEEe
Confidence            654432111  111112566777999999999999998655 555     667779998

>KOG0288|consensus

Probab=99.97  E-value=1.6e-29  Score=194.08  Aligned_cols=262  Identities=20%  Similarity=0.243  Sum_probs=203.4

Q ss_pred             CeEEEEeccCCCceEEEEEeCC-------------------CCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGE-------------------GGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS   72 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~-------------------~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~   72 (312)
                      .+....+..|.+.|..+.|-.+                   ..+  .+.+|.|-.++|+.+.|.++      ++++++++
T Consensus       165 S~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~------~~~~iAas  238 (459)
T KOG0288|consen  165 SRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSD------NKHVIAAS  238 (459)
T ss_pred             hhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCC------CceEEeec
Confidence            3445567778888888886554                   233  56677888889999999988      89999999


Q ss_pred             CCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         73 LDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        73 ~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      .|+.+++|++...+...        +....+......+++++.|.+|+.||+..  ..+..+..      ....+..++.
T Consensus       239 ~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k--~~C~kt~l------~~S~cnDI~~  310 (459)
T KOG0288|consen  239 NDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQK--AYCSKTVL------PGSQCNDIVC  310 (459)
T ss_pred             CCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhh--hheecccc------ccccccceEe
Confidence            99999999998876532        22222222333499999999999999987  33333322      2233555666


Q ss_pred             CCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        145 GPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       145 ~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      +  ...+++|-.|+.|++ |.++.+.....+.+ +.|+++..++++..+++++.|.++.+.|+++.+....+......  
T Consensus       311 ~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k--  385 (459)
T KOG0288|consen  311 S--ISDVISGHFDKKVRFWDIRSADKTRSVPLG-GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFK--  385 (459)
T ss_pred             c--ceeeeecccccceEEEeccCCceeeEeecC-cceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccc--
Confidence            5  556888999999999 77777777777755 49999999999999999999999999999999888887765443  


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCc--ceeEEEeccCCCeEEEEecC
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY--EIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~s~d  301 (312)
                       .....+.+.|||++.|+++||.||.|+||++.+++            +...+.....  .|++++|+|.|+.|++++.+
T Consensus       386 -~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK------------lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~  452 (459)
T KOG0288|consen  386 -CASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK------------LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQ  452 (459)
T ss_pred             -cccccceeEECCCCceeeeccCCCcEEEEEccCce------------EEEEeccCCCCcceEEEEEcCCCchhhcccCC
Confidence             33448899999999999999999999999999885            3444444333  59999999999999999665


Q ss_pred             CCcccceEEeC
Q psy15191        302 TKPEHAAIIIW  312 (312)
Q Consensus       302 ~~~~dg~i~iW  312 (312)
                      +.     +.+|
T Consensus       453 ~~-----v~lW  458 (459)
T KOG0288|consen  453 KA-----VTLW  458 (459)
T ss_pred             cc-----eEec
Confidence            55     9998

>KOG2445|consensus

Probab=99.97  E-value=2.6e-28  Score=180.97  Aligned_cols=252  Identities=17%  Similarity=0.342  Sum_probs=184.9

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------cccccccCCCCCceEEEEeCC
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~d  108 (312)
                      .+|.+-|+++.|.+.      |+.+|||+.|++|+|||......               ..+.+.+ ..-|+.+++++.|
T Consensus        10 s~h~DlihdVs~D~~------GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAh-PEfGqvvA~cS~D   82 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFY------GRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAH-PEFGQVVATCSYD   82 (361)
T ss_pred             cCCcceeeeeeeccc------CceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecC-ccccceEEEEecC
Confidence            478899999999888      99999999999999999754332               2444443 3456789999999


Q ss_pred             CcEEEEcCCC--CcceeeeeeeecccCCCccceeEEEECC--CCCeEEEeecCCeEEE-------ecccCceeeeec---
Q psy15191        109 KSIIVWAPDP--TTGLWLETARVGEVGGNTLGFYGCKFGP--RGDYIIAHGFQGSLHL-------DVTTWKQIQTLP---  174 (312)
Q Consensus       109 ~~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~-------d~~~~~~~~~~~---  174 (312)
                      +++.||.-..  .+.....-.+...+......|+++.|.|  -|-.|++++.||.++|       ++..|.+...++   
T Consensus        83 rtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~  162 (361)
T KOG2445|consen   83 RTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVI  162 (361)
T ss_pred             CceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhcc
Confidence            9999997632  1111112223334456778899999999  4778999999999999       677888887776   


Q ss_pred             ----ccCCceeEEEECC---CCCEEEEEecC-----CeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCC----
Q psy15191        175 ----CHQLTITQLAFSP---DDTHLVSVSRD-----RRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHD----  237 (312)
Q Consensus       175 ----~~~~~v~~~~~~~---~~~~l~~~~~d-----~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~----  237 (312)
                          .+..+..|+.|+|   ...+|+.|+.+     +.++||...... ....+....    .|..+|++++|.|+    
T Consensus       163 ~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~----d~~dpI~di~wAPn~Gr~  238 (361)
T KOG2445|consen  163 DPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELP----DHTDPIRDISWAPNIGRS  238 (361)
T ss_pred             CCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcC----CCCCcceeeeeccccCCc
Confidence                5667788999998   45678887765     478899876554 222222111    28999999999995    


Q ss_pred             CceEEEeccCCeEEEEecCCCCCC----ccccccc----ccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceE
Q psy15191        238 SRYFLTISRDGVCVVWGLGEPPTE----EDLVQNT----LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAI  309 (312)
Q Consensus       238 ~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i  309 (312)
                      -.+||+++.|| |+||.+......    +......    .-+.+..+.+|.+.|..+.|+-.|..|++.     ++||+|
T Consensus       239 y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsSt-----GdDG~V  312 (361)
T KOG2445|consen  239 YHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSST-----GDDGCV  312 (361)
T ss_pred             eeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeec-----CCCcee
Confidence            35899999999 999999742211    0000000    112566678899999999999999999999     666669


Q ss_pred             EeC
Q psy15191        310 IIW  312 (312)
Q Consensus       310 ~iW  312 (312)
                      |+|
T Consensus       313 RLW  315 (361)
T KOG2445|consen  313 RLW  315 (361)
T ss_pred             eeh
Confidence            999

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.7e-27  Score=199.16  Aligned_cols=220  Identities=12%  Similarity=0.118  Sum_probs=165.3

Q ss_pred             EEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCcc---------------cccccccCCCCC-ceEEE
Q psy15191         42 TLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSKQ-LHLLS  104 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~~-~~l~~  104 (312)
                      .+.+|.+.|++++|+| +      +.+|++|+.|++|++||+.++..               ..+..+.+++.+ .+|++
T Consensus        70 ~l~GH~~~V~~v~fsP~d------~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaS  143 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFD------PQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLAS  143 (493)
T ss_pred             eEeCCCCCEEEEEEcCCC------CCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEE
Confidence            5789999999999999 5      77999999999999999976421               123344556653 58999


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc-eeE
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT-ITQ  182 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~-v~~  182 (312)
                      ++.|+.|++||+.+.+  ....     +..|...|.+++|+|++.+|++++.|+.|++ |+++.+....+.+|.+. +..
T Consensus       144 gs~DgtVrIWDl~tg~--~~~~-----l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~  216 (493)
T PTZ00421        144 AGADMVVNVWDVERGK--AVEV-----IKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQR  216 (493)
T ss_pred             EeCCCEEEEEECCCCe--EEEE-----EcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceE
Confidence            9999999999998743  2222     3468888999999999999999999999999 88888877777778764 456


Q ss_pred             EEECCCCCEEEEEe----cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCC
Q psy15191        183 LAFSPDDTHLVSVS----RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGE  257 (312)
Q Consensus       183 ~~~~~~~~~l~~~~----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~  257 (312)
                      +.|.+++..+++++    .|+.|++||+++...........     ....+....|++++++|++++ .|+.|++||+..
T Consensus       217 ~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d-----~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~  291 (493)
T PTZ00421        217 CLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLD-----QSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN  291 (493)
T ss_pred             EEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccC-----CCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence            78999888887764    47899999998754332221110     334456678999999999887 599999999987


Q ss_pred             CCCCcccccccccceeEEee-ccCcceeEEEeccC
Q psy15191        258 PPTEEDLVQNTLWPEVQKLY-GHGYEIYSLAASHD  291 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~  291 (312)
                      +.            .+.... .+..++..++|.|.
T Consensus       292 ~~------------~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        292 ER------------LTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             Cc------------eEEEeeccCCCCCcceEeccc
Confidence            63            222222 23445667777664

>KOG0274|consensus

Probab=99.97  E-value=1.4e-28  Score=205.93  Aligned_cols=238  Identities=20%  Similarity=0.316  Sum_probs=197.6

Q ss_pred             EEeCCCCceEEE-EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC------CCCCceEE
Q psy15191         31 KWNGEGGKVLYT-LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD------DSKQLHLL  103 (312)
Q Consensus        31 ~w~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------~~~~~~l~  103 (312)
                      .|+..++..+.. +.||.+.|+++++...      +.+|++|+.|.++++||..++++..+...+.      ......++
T Consensus       232 ~~~~~~~~~i~~~l~GH~g~V~~l~~~~~------~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~  305 (537)
T KOG0274|consen  232 LWDLNNGYLILTRLVGHFGGVWGLAFPSG------GDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLV  305 (537)
T ss_pred             EeecccceEEEeeccCCCCCceeEEEecC------CCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEe
Confidence            489888998888 9999999999999876      6799999999999999999999865444332      22334788


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +|+.|.+|++|++.++.  .+....     +|..+|.++..+  +.++++|+.|+.|++ |..+.+++..+.+|...|.+
T Consensus       306 sgs~D~tVkVW~v~n~~--~l~l~~-----~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~s  376 (537)
T KOG0274|consen  306 SGSRDNTVKVWDVTNGA--CLNLLR-----GHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYS  376 (537)
T ss_pred             eccCCceEEEEeccCcc--eEEEec-----cccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEE
Confidence            89999999999999743  333333     589999999998  889999999999999 88888999999999999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCC
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      +.+.+. ..+++|+.|+.|++||+++. +.+..+..       |..-+..+.+  .+++|++++.|+.|++||..++.  
T Consensus       377 l~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~-------h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~--  444 (537)
T KOG0274|consen  377 LIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQG-------HTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGE--  444 (537)
T ss_pred             EEecCc-ceEEeeeeccceEeecCCchhhhhhhhcC-------Cccccccccc--ccceeEeccccccEEEeecccCc--
Confidence            988765 88999999999999999998 67666665       6666655544  68899999999999999998884  


Q ss_pred             cccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        262 EDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                ++..+.+ |...|..+++.  ...+++++.|+.     +++|
T Consensus       445 ----------~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~-----~~l~  479 (537)
T KOG0274|consen  445 ----------CLRTLEGRHVGGVSALALG--KEEILCSSDDGS-----VKLW  479 (537)
T ss_pred             ----------eeeeeccCCcccEEEeecC--cceEEEEecCCe-----eEEE
Confidence                      6778887 67888888876  467888855555     9988

>KOG0640|consensus

Probab=99.97  E-value=1.4e-28  Score=182.81  Aligned_cols=267  Identities=15%  Similarity=0.199  Sum_probs=209.8

Q ss_pred             EEeccCCCceEEEEEeCCC-------------------------------------CceEEEEccccCcEEEEEEecCcC
Q psy15191         18 YTLTNHKSKVMAVKWNGEG-------------------------------------GKVLYTLTNHKSKVMAVKWVLNTS   60 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~-------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~   60 (312)
                      ..+..|+.++.+.+|++++                                     -..+++|-.|.++|+++.|+|.  
T Consensus       106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr--  183 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR--  183 (430)
T ss_pred             EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch--
Confidence            3466799999999888876                                     1357888899999999999999  


Q ss_pred             cCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec
Q psy15191         61 LDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG  130 (312)
Q Consensus        61 ~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  130 (312)
                          ...|++|+.|++|+++|+.....          ..+....++|.|.+++.|..-..+++||+++.+.....    .
T Consensus       184 ----e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsa----n  255 (430)
T KOG0640|consen  184 ----ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSA----N  255 (430)
T ss_pred             ----hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeec----C
Confidence                89999999999999999976432          45667778999999999999999999999984432221    1


Q ss_pred             ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccC-CceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQ-LTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                      +-..|...|+++.+++.++..++++.||.|++ |--+.+.+..+. .|. ..|.+..|..+++++++.+.|..+++|.+.
T Consensus       256 Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~  335 (430)
T KOG0640|consen  256 PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIS  335 (430)
T ss_pred             cccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeec
Confidence            33578999999999999999999999999999 333333344433 454 578999999999999999999999999999


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL  286 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  286 (312)
                      +++.+..+.+......  ...-+...|+....|++.-.+ .+.+.-||.++....           ...-.+|.+.++.+
T Consensus       336 t~R~l~~YtGAg~tgr--q~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~-----------~l~slgHn~a~R~i  402 (430)
T KOG0640|consen  336 TGRMLKEYTGAGTTGR--QKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRV-----------ALLSLGHNGAVRWI  402 (430)
T ss_pred             CCceEEEEecCCcccc--hhhhhhhhhcCccceEEccccccCceeeccccchhhh-----------hhcccCCCCCceEE
Confidence            9999999887632211  111234567777777776553 457889999887431           12224899999999


Q ss_pred             EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        287 AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       287 ~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .-||.+.-++++|.|-.     +|+|
T Consensus       403 ~HSP~~p~FmTcsdD~r-----aRFW  423 (430)
T KOG0640|consen  403 VHSPVEPAFMTCSDDFR-----ARFW  423 (430)
T ss_pred             EeCCCCCceeeecccce-----eeee
Confidence            99999999999966655     9999

>KOG0277|consensus

Probab=99.97  E-value=1e-28  Score=178.43  Aligned_cols=227  Identities=20%  Similarity=0.295  Sum_probs=176.6

Q ss_pred             EEEEEecCcCcCCCCceE-EEe-----cCCCcEEEeeecCCcc-------------cccccccCCCCCceEEEEeCCCcE
Q psy15191         51 MAVKWVLNTSLDPEHKDL-VSC-----SLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        51 ~~~~~~~~~~~~~~~~~l-~s~-----~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      .++.|+|-    -++++. |++     ...|++.|.++...+.             ..+.+....  ...+++++.||.+
T Consensus        12 ysvqfSPf----~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~--e~~~~~a~GDGSL   85 (311)
T KOG0277|consen   12 YSVQFSPF----VENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENH--ENQVIAASGDGSL   85 (311)
T ss_pred             ceeEeccc----ccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCC--cceEEEEecCceE
Confidence            46778875    223322 222     2357888888863332             234444333  3489999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC-C
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-D  188 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~  188 (312)
                      ++||+....      .++..++.|...|.++.|++ ..+.+++++.|++|++ +..-.+.+.++.+|...|...+|+| .
T Consensus        86 rl~d~~~~s------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~  159 (311)
T KOG0277|consen   86 RLFDLTMPS------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHI  159 (311)
T ss_pred             EEeccCCCC------cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCC
Confidence            999965432      35556678999999999998 4566888899999999 5555556777889999999999999 7


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      .+.+++++.|+.+++||++.......+..       |...+.++.|+.. ...|++|+.|+.|+.||++.-..       
T Consensus       160 ~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-------h~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~-------  225 (311)
T KOG0277|consen  160 PNLFASASGDGTLRLWDVRSPGKFMSIEA-------HNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT-------  225 (311)
T ss_pred             CCeEEEccCCceEEEEEecCCCceeEEEe-------ccceeEeecccccCCcEEEecCCCceEEEEehhhccc-------
Confidence            88999999999999999998776666665       7788999999974 56788999999999999987643       


Q ss_pred             cccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                          ++.++.+|.-.|+.+.|||.. .+||++|.     |.++|||
T Consensus       226 ----pl~eL~gh~~AVRkvk~Sph~~~lLaSasY-----DmT~riw  262 (311)
T KOG0277|consen  226 ----PLFELNGHGLAVRKVKFSPHHASLLASASY-----DMTVRIW  262 (311)
T ss_pred             ----cceeecCCceEEEEEecCcchhhHhhhccc-----cceEEec
Confidence                788999999999999999974 68899954     5559999

>KOG0772|consensus

Probab=99.97  E-value=8.5e-29  Score=195.36  Aligned_cols=246  Identities=17%  Similarity=0.161  Sum_probs=181.9

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------------------------
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------------------------   87 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------------------------   87 (312)
                      ....+++|+..|.++++.|.      |..|+||+.|-.|++||+..-..                               
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~------GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvv  232 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPS------GARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVV  232 (641)
T ss_pred             ceEeccCCceEEEEeeecCC------CceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEE
Confidence            34567888889999999888      88999999999999998764221                               


Q ss_pred             ------------------------------------cccccccCCCC-CceEEEEeCCCcEEEEcCCCCcceeeeeeeec
Q psy15191         88 ------------------------------------YLPYHMRDDSK-QLHLLSCSMDKSIIVWAPDPTTGLWLETARVG  130 (312)
Q Consensus        88 ------------------------------------~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  130 (312)
                                                          ..+.+..++|. ...+++++.||++++||+...+... ..+...
T Consensus       233 sg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~-qVik~k  311 (641)
T KOG0772|consen  233 SGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQL-QVIKTK  311 (641)
T ss_pred             ecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhhe-eEEeec
Confidence                                                02223333332 3479999999999999998754322 223333


Q ss_pred             ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee---ecccCC--ceeEEEECCCCCEEEEEecCCeEEEE
Q psy15191        131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT---LPCHQL--TITQLAFSPDDTHLVSVSRDRRWGLY  204 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~---~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~w  204 (312)
                      ...+...+++.++|+|+++++++|..||.|.+ +..+|-....   ..+|..  .|+++.||+||++|++-+.|+++++|
T Consensus       312 ~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvW  391 (641)
T KOG0772|consen  312 PAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVW  391 (641)
T ss_pred             cCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeee
Confidence            33466778999999999999999999999999 3222222211   226776  89999999999999999999999999


Q ss_pred             EccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc------CCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       205 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      |++..+..........    ...+-+.++|||+.++|++|..      .|.+.+||..+..            .++++.-
T Consensus       392 DLrq~kkpL~~~tgL~----t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d------------~v~ki~i  455 (641)
T KOG0772|consen  392 DLRQFKKPLNVRTGLP----TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLD------------TVYKIDI  455 (641)
T ss_pred             eccccccchhhhcCCC----ccCCCCccccCCCceEEEecccccCCCCCceEEEEecccee------------eEEEecC
Confidence            9997654332222111    3344567999999999999854      4579999876652            5677766


Q ss_pred             cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        279 HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ....|..+.|+|.-+.|+.|+.||.     ++|+
T Consensus       456 ~~aSvv~~~WhpkLNQi~~gsgdG~-----~~vy  484 (641)
T KOG0772|consen  456 STASVVRCLWHPKLNQIFAGSGDGT-----AHVY  484 (641)
T ss_pred             CCceEEEEeecchhhheeeecCCCc-----eEEE
Confidence            6888999999999999999966655     7764

>KOG0296|consensus

Probab=99.97  E-value=3.1e-28  Score=184.37  Aligned_cols=242  Identities=17%  Similarity=0.206  Sum_probs=192.1

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCc
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      -+.+|..|.++|.+++.+|+      .++++||+.|..-.||++.++..        -.+....++.++.+|++|..+|.
T Consensus        56 S~~tF~~H~~svFavsl~P~------~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~  129 (399)
T KOG0296|consen   56 SLVTFDKHTDSVFAVSLHPN------NNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGK  129 (399)
T ss_pred             ceeehhhcCCceEEEEeCCC------CceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCcc
Confidence            46789999999999999998      89999999999999999998875        25677788899999999999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCC
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDD  189 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~  189 (312)
                      |+||...++...+...       .....+.=+.|+|.+..|++|+.||.+.+ .+.+....+.+.+|+.++++=.|.|+|
T Consensus       130 v~v~~~stg~~~~~~~-------~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdG  202 (399)
T KOG0296|consen  130 VLVFKVSTGGEQWKLD-------QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDG  202 (399)
T ss_pred             EEEEEcccCceEEEee-------cccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCC
Confidence            9999999865443322       22344666899999999999999999999 443334455677999999999999999


Q ss_pred             CEEEEEecCCeEEEEEccCCCeEEEEeccCCCC--------------------------------------------ccc
Q psy15191        190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN--------------------------------------------GVH  225 (312)
Q Consensus       190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~--------------------------------------------~~~  225 (312)
                      +.++++..||+|++|+..+..++..+.......                                            ..+
T Consensus       203 Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~  282 (399)
T KOG0296|consen  203 KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQ  282 (399)
T ss_pred             ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccc
Confidence            999999999999999999988777666222110                                            001


Q ss_pred             ceeeEEEE---EcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        226 KRIIWGVA---WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       226 ~~~v~~~~---~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      ...+.++.   ++..=.+.|+|+.||+|.|||+...             .++..-.|...|..+.|-+ ..+|++++.|+
T Consensus       283 e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~-------------~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g  348 (399)
T KOG0296|consen  283 EELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAS-------------TLRHICEHEDGVTKLKWLN-TDYLLTACANG  348 (399)
T ss_pred             hhhhhhhhhcccccccchhhcccccceEEEEecccc-------------hhheeccCCCceEEEEEcC-cchheeeccCc
Confidence            12222232   3334457889999999999999876             4555667899999999998 78999997666


Q ss_pred             CcccceEEeC
Q psy15191        303 KPEHAAIIIW  312 (312)
Q Consensus       303 ~~~dg~i~iW  312 (312)
                      .     |+.|
T Consensus       349 ~-----v~~w  353 (399)
T KOG0296|consen  349 K-----VRQW  353 (399)
T ss_pred             e-----EEee
Confidence            6     9998

>KOG1539|consensus

Probab=99.97  E-value=6.9e-27  Score=194.21  Aligned_cols=286  Identities=17%  Similarity=0.215  Sum_probs=209.5

Q ss_pred             CCCceEeCCCCeEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCC
Q psy15191          4 EPGDVVNGEGGKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPE   64 (312)
Q Consensus         4 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~   64 (312)
                      .+-.+||..+++.+++++++...|+++.                   ++...++.+.+|+.-.++|++++|..|      
T Consensus       182 G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtD------  255 (910)
T KOG1539|consen  182 GRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTD------  255 (910)
T ss_pred             CcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccC------
Confidence            3457899999999999999999999887                   777778899999855699999999988      


Q ss_pred             Cc-eEEEecCCCcEEEeeecCCccccccc---------ccCCCCCceEEEEeCCCcEEEEcCCCCcce------------
Q psy15191         65 HK-DLVSCSLDKTAILWKYVSEGNYLPYH---------MRDDSKQLHLLSCSMDKSIIVWAPDPTTGL------------  122 (312)
Q Consensus        65 ~~-~l~s~~~dg~i~vw~~~~~~~~~~~~---------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------------  122 (312)
                      |. .+++|+..|.+.+||++..+...+..         ..+-+....+++++.|+.+++|=.+++.+.            
T Consensus       256 G~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~  335 (910)
T KOG1539|consen  256 GNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSA  335 (910)
T ss_pred             CCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCC
Confidence            44 57788888999999998876521111         111122224555555555444422211110            


Q ss_pred             ---------------------------------------e----------------------------------------
Q psy15191        123 ---------------------------------------W----------------------------------------  123 (312)
Q Consensus       123 ---------------------------------------~----------------------------------------  123 (312)
                                                             .                                        
T Consensus       336 Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~  415 (910)
T KOG1539|consen  336 PPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVI  415 (910)
T ss_pred             CchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhccee
Confidence                                                   0                                        


Q ss_pred             --------------------eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee---cccCCc
Q psy15191        124 --------------------LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL---PCHQLT  179 (312)
Q Consensus       124 --------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~---~~~~~~  179 (312)
                                          ...+....+......+.+++.++.|++.+.|+..|.|.+ +++++-.+..+   +.|.++
T Consensus       416 ~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~  495 (910)
T KOG1539|consen  416 TAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGE  495 (910)
T ss_pred             EEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCc
Confidence                                000000011112356788999999999999999999999 88888777777   489999


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC----------------------------------Cccc
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT----------------------------------NGVH  225 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----------------------------------~~~~  225 (312)
                      |++++...-++.+++++.+|.+.+||......+..+......                                  ...|
T Consensus       496 V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh  575 (910)
T KOG1539|consen  496 VTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGH  575 (910)
T ss_pred             eeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcc
Confidence            999999998999999999999999999875433222211100                                  1128


Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcc
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPE  305 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~  305 (312)
                      ...|++++|||||++|++++.|++|++||+.++.            ++- ...-..+..++.|||+|.+|||...|..  
T Consensus       576 ~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~------------lID-~~~vd~~~~sls~SPngD~LAT~Hvd~~--  640 (910)
T KOG1539|consen  576 GNRITDMTFSPDGRWLISASMDSTIRTWDLPTGT------------LID-GLLVDSPCTSLSFSPNGDFLATVHVDQN--  640 (910)
T ss_pred             ccceeeeEeCCCCcEEEEeecCCcEEEEeccCcc------------eee-eEecCCcceeeEECCCCCEEEEEEecCc--
Confidence            8999999999999999999999999999999884            222 2234678899999999999999987733  


Q ss_pred             cceEEeC
Q psy15191        306 HAAIIIW  312 (312)
Q Consensus       306 dg~i~iW  312 (312)
                        -|++|
T Consensus       641 --gIylW  645 (910)
T KOG1539|consen  641 --GIYLW  645 (910)
T ss_pred             --eEEEE
Confidence              28888

>KOG0313|consensus

Probab=99.97  E-value=1e-28  Score=187.85  Aligned_cols=229  Identities=19%  Similarity=0.245  Sum_probs=182.8

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      |.+.|.++.-.        ++.++||+.||.+++||......          ..+.+....+....|++++.|.++++|.
T Consensus       104 hdDWVSsv~~~--------~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~  175 (423)
T KOG0313|consen  104 HDDWVSSVKGA--------SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWK  175 (423)
T ss_pred             chhhhhhhccc--------CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEE
Confidence            56666666554        35999999999999999876543          1233333344555899999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCc---------------------------
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWK---------------------------  168 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~---------------------------  168 (312)
                      ++.++......   ..-.+|...|.++...+++..+++|+.|..+.+    |.                           
T Consensus       176 ~~~~~~~~~~~---~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lki----Ws~~~~~~~~~E~~s~~rrk~~~~~~~~~  248 (423)
T KOG0313|consen  176 WNVGENKVKAL---KVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKI----WSVETDEEDELESSSNRRRKKQKREKEGG  248 (423)
T ss_pred             ecCchhhhhHH---hHhcccccceeEEEecCCCCeEEeecccceeee----cccCCCccccccccchhhhhhhhhhhccc
Confidence            88754322111   112389999999999999999999999999999    44                           


Q ss_pred             ---eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        169 ---QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       169 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                         ++..+.+|..+|.++.|++ ...+++++.|.+|+.||+.+.+....+.        ....++++..+|..++|++|+
T Consensus       249 ~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~--------~~ksl~~i~~~~~~~Ll~~gs  319 (423)
T KOG0313|consen  249 TRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT--------TNKSLNCISYSPLSKLLASGS  319 (423)
T ss_pred             ccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeee--------cCcceeEeecccccceeeecC
Confidence               1112338999999999987 6789999999999999999998887777        556789999999999999999


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|..|++||.+.+....         ..+.+.+|.+.|.++.|+|.. .+|++|+.|++     +++|
T Consensus       320 sdr~irl~DPR~~~gs~---------v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t-----~klW  373 (423)
T KOG0313|consen  320 SDRHIRLWDPRTGDGSV---------VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNT-----VKLW  373 (423)
T ss_pred             CCCceeecCCCCCCCce---------eEEeeecchhhhhheecCCCCceEEEEEecCCe-----EEEE
Confidence            99999999998874322         567889999999999999976 56788866665     9999

>KOG1446|consensus

Probab=99.97  E-value=2.5e-27  Score=176.49  Aligned_cols=233  Identities=17%  Similarity=0.164  Sum_probs=184.0

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEE---------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVK---------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~---------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      ++++..+|+.+.++..++=.+..+.                     .+..+.+.++.|.||...|++++.+|-      +
T Consensus        39 ~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~------~  112 (311)
T KOG1446|consen   39 RLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPK------D  112 (311)
T ss_pred             EEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCC------C
Confidence            4566677777776665543333333                     344557889999999999999999998      7


Q ss_pred             ceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                      ..+++++.|++|++||++..++.      .....+++|.|..+|++.....|++||++.-......++....  ......
T Consensus       113 d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~--~~~~ew  190 (311)
T KOG1446|consen  113 DTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITD--NDEAEW  190 (311)
T ss_pred             CeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCC--CCccce
Confidence            89999999999999999977763      3344567899989999888889999999975433333333222  445678


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCce---eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTI---TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  215 (312)
                      ..+.|+|+|+.++.+...+.+++ |.-++.+...+..+...-   .+.+|+||++++++|+.||+|.+|+++++.....+
T Consensus       191 ~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~  270 (311)
T KOG1446|consen  191 TDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVL  270 (311)
T ss_pred             eeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEe
Confidence            99999999999999999999998 888888888877554432   57889999999999999999999999999998888


Q ss_pred             eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      .++      +..++.++.|+|....+++++.  .+.+|=.
T Consensus       271 ~~~------~~~~~~~~~fnP~~~mf~sa~s--~l~fw~p  302 (311)
T KOG1446|consen  271 RGP------NGGPVSCVRFNPRYAMFVSASS--NLVFWLP  302 (311)
T ss_pred             cCC------CCCCccccccCCceeeeeecCc--eEEEEec
Confidence            875      5677889999998888877654  5777743

>KOG1446|consensus

Probab=99.97  E-value=3e-27  Score=176.04  Aligned_cols=231  Identities=19%  Similarity=0.234  Sum_probs=181.3

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------------------------
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------------------------   88 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------------------------   88 (312)
                      ++.+.|......|+++.|+++      |.++++++.|.+++|||..++...                             
T Consensus         5 ~~ak~f~~~~~~i~sl~fs~~------G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~   78 (311)
T KOG1446|consen    5 RPAKVFRETNGKINSLDFSDD------GLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKE   78 (311)
T ss_pred             ccccccccCCCceeEEEecCC------CCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCC
Confidence            445566666788999999888      888999888889999988776541                             


Q ss_pred             -----------------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         89 -----------------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        89 -----------------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                                             .+..+..+|.+..+++++.|++|++||++..+.+-+....         .-..++|.
T Consensus        79 d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~---------~~pi~AfD  149 (311)
T KOG1446|consen   79 DDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS---------GRPIAAFD  149 (311)
T ss_pred             CCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC---------CCcceeEC
Confidence                                   2333334667779999999999999999975554433322         12347999


Q ss_pred             CCCCeEEEeecCCeEEE-ecccCce--eeeec---ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC
Q psy15191        146 PRGDYIIAHGFQGSLHL-DVTTWKQ--IQTLP---CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~-d~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                      |+|-++|++.....|++ |++..+.  ...+.   +.....+.|.|+|||++++.++..+.+++.|.-++.....+....
T Consensus       150 p~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~  229 (311)
T KOG1446|consen  150 PEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYP  229 (311)
T ss_pred             CCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeecc
Confidence            99999999998889999 8877642  22222   346778999999999999999999999999999998877777654


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEE
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ....    -.-..+|+||++++++|+.||+|.+|+++++.            .+..+.+ +.+++.++.|+|.-.+++++
T Consensus       230 ~~~~----~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~------------~v~~~~~~~~~~~~~~~fnP~~~mf~sa  293 (311)
T KOG1446|consen  230 NAGN----LPLSATFTPDSKFVLSGSDDGTIHVWNLETGK------------KVAVLRGPNGGPVSCVRFNPRYAMFVSA  293 (311)
T ss_pred             CCCC----cceeEEECCCCcEEEEecCCCcEEEEEcCCCc------------EeeEecCCCCCCccccccCCceeeeeec
Confidence            3221    12467899999999999999999999998874            5777777 68899999999998888887


Q ss_pred             e
Q psy15191        299 C  299 (312)
Q Consensus       299 s  299 (312)
                      +
T Consensus       294 ~  294 (311)
T KOG1446|consen  294 S  294 (311)
T ss_pred             C
Confidence            4

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=8.6e-27  Score=196.01  Aligned_cols=232  Identities=13%  Similarity=0.111  Sum_probs=169.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------cccccccC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------YLPYHMRD   95 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------~~~~~~~~   95 (312)
                      |+......+..+.+|.+.|.+++|+|+     ++.+|+||+.|++|+|||+.++..                ..+..+.+
T Consensus        59 ~~~~r~~~v~~L~gH~~~V~~lafsP~-----~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf  133 (568)
T PTZ00420         59 ENQMRKPPVIKLKGHTSSILDLQFNPC-----FSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDW  133 (568)
T ss_pred             eecCCCceEEEEcCCCCCEEEEEEcCC-----CCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEE
Confidence            555555677889999999999999996     257999999999999999975321                12344555


Q ss_pred             CCCCce-EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee
Q psy15191         96 DSKQLH-LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus        96 ~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~  173 (312)
                      +|.+.. +++++.|+.|++||+++.+..  ...      .+...|.+++|+|+|.+|++++.|+.+++ |+++++....+
T Consensus       134 ~P~g~~iLaSgS~DgtIrIWDl~tg~~~--~~i------~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl  205 (568)
T PTZ00420        134 NPMNYYIMCSSGFDSFVNIWDIENEKRA--FQI------NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF  205 (568)
T ss_pred             CCCCCeEEEEEeCCCeEEEEECCCCcEE--EEE------ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence            666654 578999999999999985422  221      13457999999999999999999999999 99888888888


Q ss_pred             cccCCceeEE-----EECCCCCEEEEEecCC----eEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        174 PCHQLTITQL-----AFSPDDTHLVSVSRDR----RWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       174 ~~~~~~v~~~-----~~~~~~~~l~~~~~d~----~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      .+|.+.+...     .|++++.+|++++.|+    .|+|||++. ...+.......     +...+......+++.++++
T Consensus       206 ~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~-----~~~~L~p~~D~~tg~l~ls  280 (568)
T PTZ00420        206 HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDN-----ASAPLIPHYDESTGLIYLI  280 (568)
T ss_pred             ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecC-----CccceEEeeeCCCCCEEEE
Confidence            8888765432     3568999999988774    799999995 44444433211     2233333444566889999


Q ss_pred             eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                      |+.|+.|++|++..+..          ..+..+. +..++.+++|.|..
T Consensus       281 GkGD~tIr~~e~~~~~~----------~~l~~~~-s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        281 GKGDGNCRYYQHSLGSI----------RKVNEYK-SCSPFRSFGFLPKQ  318 (568)
T ss_pred             EECCCeEEEEEccCCcE----------Eeecccc-cCCCccceEEcccc
Confidence            99999999999976521          0222222 56778888998863

>KOG2096|consensus

Probab=99.97  E-value=1.8e-28  Score=182.81  Aligned_cols=230  Identities=21%  Similarity=0.288  Sum_probs=168.4

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------c----------------
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------Y----------------   88 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~----------------   88 (312)
                      +..|++|.+.|++++|+.+      |++|+|++.|+.|++|+++....               .                
T Consensus        79 ~~~LKgH~~~vt~~~FsSd------GK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~  152 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSD------GKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVK  152 (420)
T ss_pred             hhhhhccCCceeeeEEcCC------CceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEc
Confidence            4568899999999999999      99999999999999999876332               0                


Q ss_pred             ------------------------------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc
Q psy15191         89 ------------------------------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV  132 (312)
Q Consensus        89 ------------------------------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  132 (312)
                                                          .+.......++.++++++.|..|.+|+++.   +.+....    
T Consensus       153 ~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkG---q~L~~id----  225 (420)
T KOG2096|consen  153 RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKG---QLLQSID----  225 (420)
T ss_pred             cCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCC---ceeeeec----
Confidence                                                000001123455899999999999999983   3333333    


Q ss_pred             CCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee-------------eecccCCceeEEEECCCCCEEEEEecCC
Q psy15191        133 GGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ-------------TLPCHQLTITQLAFSPDDTHLVSVSRDR  199 (312)
Q Consensus       133 ~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~  199 (312)
                       .....-+..+.+|+|+++++++..-.+++    |++..             .+.+|...|..++|+|+...+++.+.||
T Consensus       226 -tnq~~n~~aavSP~GRFia~~gFTpDVkV----wE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG  300 (420)
T KOG2096|consen  226 -TNQSSNYDAAVSPDGRFIAVSGFTPDVKV----WEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDG  300 (420)
T ss_pred             -cccccccceeeCCCCcEEEEecCCCCceE----EEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCC
Confidence             23344567899999999999999888888    76554             3449999999999999999999999999


Q ss_pred             eEEEEEccCC----CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        200 RWGLYKRQSS----GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       200 ~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      ++++||..-.    +....+...........+....++++|+|+.||.+. ...+++|..+++....         ++  
T Consensus       301 ~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~---------~~--  368 (420)
T KOG2096|consen  301 KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYP---------EL--  368 (420)
T ss_pred             cEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccch---------hH--
Confidence            9999998631    111111111111111233344899999999988654 4469999888864321         11  


Q ss_pred             eeccCcceeEEEeccCCCeEEEEe
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      -..|+..|.+++|+++|++++|++
T Consensus       369 e~~h~~~Is~is~~~~g~~~atcG  392 (420)
T KOG2096|consen  369 EDIHSTTISSISYSSDGKYIATCG  392 (420)
T ss_pred             HHhhcCceeeEEecCCCcEEeeec
Confidence            135899999999999999999995

>KOG0293|consensus

Probab=99.96  E-value=1.7e-28  Score=188.70  Aligned_cols=234  Identities=22%  Similarity=0.347  Sum_probs=187.2

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------cccccccCCCCCceEEEEe
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------YLPYHMRDDSKQLHLLSCS  106 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~~~~~l~~~~  106 (312)
                      +..+.+..|.++|+-+.|+++      |++|||++.|.+..+|.+.....           ..+.+..++|+..++++|+
T Consensus       215 qt~qil~~htdEVWfl~FS~n------GkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg  288 (519)
T KOG0293|consen  215 QTWQILQDHTDEVWFLQFSHN------GKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACG  288 (519)
T ss_pred             hhhhhHhhCCCcEEEEEEcCC------CeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecC
Confidence            445678899999999999999      99999999999999998865543           3566777899999999999


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----c-cCCcee
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----C-HQLTIT  181 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----~-~~~~v~  181 (312)
                      .+..+.+||..++..  ....+    .++...+.+++|.|||..+++|+.|+.+..    |+.-....    + ....|.
T Consensus       289 ~~e~~~lwDv~tgd~--~~~y~----~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~----wdlDgn~~~~W~gvr~~~v~  358 (519)
T KOG0293|consen  289 FDEVLSLWDVDTGDL--RHLYP----SGLGFSVSSCAWCPDGFRFVTGSPDRTIIM----WDLDGNILGNWEGVRDPKVH  358 (519)
T ss_pred             chHheeeccCCcchh--hhhcc----cCcCCCcceeEEccCCceeEecCCCCcEEE----ecCCcchhhcccccccceeE
Confidence            999999999998543  22222    235678999999999999999999999998    54443322    1 235689


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      +++.++||+++++.+.|..|++++..+......+.        ...+|++++.|.+++++++.-.+..+++||++...  
T Consensus       359 dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis--------e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~--  428 (519)
T KOG0293|consen  359 DLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS--------EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENK--  428 (519)
T ss_pred             EEEEcCCCcEEEEEecccceeeechhhhhhhcccc--------ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhh--
Confidence            99999999999999999999999988755544433        55679999999999999999999999999998653  


Q ss_pred             cccccccccceeEEeeccCcc--eeEEEec-cCCCeEEEEecCCCcccceEEeC
Q psy15191        262 EDLVQNTLWPEVQKLYGHGYE--IYSLAAS-HDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~--v~~~~~s-~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                .+..+.||...  +-.-+|- .+..++++|     +||+.|+||
T Consensus       429 ----------lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSG-----SED~kvyIW  467 (519)
T KOG0293|consen  429 ----------LVRKYFGHKQGHFIIRSCFGGGNDKFIASG-----SEDSKVYIW  467 (519)
T ss_pred             ----------HHHHhhcccccceEEEeccCCCCcceEEec-----CCCceEEEE
Confidence                      67777787654  3334454 355899999     455559999

>PTZ00421 coronin; Provisional

Probab=99.96  E-value=6.1e-27  Score=195.84  Aligned_cols=201  Identities=16%  Similarity=0.245  Sum_probs=152.4

Q ss_pred             cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-eccc
Q psy15191         90 PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTT  166 (312)
Q Consensus        90 ~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~  166 (312)
                      +..+.+++ ++.+|++++.|++|++||+.+.............+.+|...|.+++|+|++ ++|++++.|+.|++ |+.+
T Consensus        78 V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t  157 (493)
T PTZ00421         78 IIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER  157 (493)
T ss_pred             EEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC
Confidence            34445566 667999999999999999976421111111233456899999999999985 68999999999999 7777


Q ss_pred             CceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccce-eeEEEEEcCCCceEEEec
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR-IIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~  245 (312)
                      .+....+..|...|.+++|+|++.+|++++.|+.|++||+++.+.+..+..       |.. .+..+.|.+++..+++++
T Consensus       158 g~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~-------H~~~~~~~~~w~~~~~~ivt~G  230 (493)
T PTZ00421        158 GKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEA-------HASAKSQRCLWAKRKDLIITLG  230 (493)
T ss_pred             CeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEec-------CCCCcceEEEEcCCCCeEEEEe
Confidence            777777888999999999999999999999999999999998887766654       433 244678999888777654


Q ss_pred             ----cCCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        246 ----RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          .|+.|++||++....           ++..... +...+....|++++++|++++.    .|+.|++|
T Consensus       231 ~s~s~Dr~VklWDlr~~~~-----------p~~~~~~d~~~~~~~~~~d~d~~~L~lggk----gDg~Iriw  287 (493)
T PTZ00421        231 CSKSQQRQIMLWDTRKMAS-----------PYSTVDLDQSSALFIPFFDEDTNLLYIGSK----GEGNIRCF  287 (493)
T ss_pred             cCCCCCCeEEEEeCCCCCC-----------ceeEeccCCCCceEEEEEcCCCCEEEEEEe----CCCeEEEE
Confidence                478999999986532           2333322 2345666789999999999862    35559998

>KOG1408|consensus

Probab=99.96  E-value=1.7e-27  Score=195.10  Aligned_cols=278  Identities=17%  Similarity=0.221  Sum_probs=215.4

Q ss_pred             CCCCc---eEeCCCCeEEEEeccCCCceEEEEEeCCCCc---eEEEEccccCcEEEEEEecCcCcCCC-----CceEEEe
Q psy15191          3 SEPGD---VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGK---VLYTLTNHKSKVMAVKWVLNTSLDPE-----HKDLVSC   71 (312)
Q Consensus         3 ~~~~~---v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~-----~~~l~s~   71 (312)
                      .||+.   .++..+.++...+..|+-.|    ||.+.-.   ....+-.|...|+.+.-.|..--++.     ...+.||
T Consensus       323 ~fPD~IA~~Fdet~~klscVYndhSlYv----WDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TC  398 (1080)
T KOG1408|consen  323 IFPDAIACQFDETTDKLSCVYNDHSLYV----WDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTC  398 (1080)
T ss_pred             cCCceeEEEecCCCceEEEEEcCceEEE----EeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEe
Confidence            35554   36667788888888898888    7765532   23445569999999987773000011     1358999


Q ss_pred             cCCCcEEEeeecCCcc---------------------------------------------cccccccCCCCCceEEEEe
Q psy15191         72 SLDKTAILWKYVSEGN---------------------------------------------YLPYHMRDDSKQLHLLSCS  106 (312)
Q Consensus        72 ~~dg~i~vw~~~~~~~---------------------------------------------~~~~~~~~~~~~~~l~~~~  106 (312)
                      +.|++|++|+++....                                             ..+.....+|++.+|++|.
T Consensus       399 SsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGD  478 (1080)
T KOG1408|consen  399 SSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGD  478 (1080)
T ss_pred             cCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccC
Confidence            9999999999876221                                             1334444578999999999


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC---CCCeEEEeecCCeEEE-ec-ccCceeeeecccCC---
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP---RGDYIIAHGFQGSLHL-DV-TTWKQIQTLPCHQL---  178 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~i~~-d~-~~~~~~~~~~~~~~---  178 (312)
                      ..|++++|++...+.       ...+..|...|.|+.|+.   ..++|++++.|..|++ |. +++++...+.+|..   
T Consensus       479 r~GnlrVy~Lq~l~~-------~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssIT  551 (1080)
T KOG1408|consen  479 RGGNLRVYDLQELEY-------TCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSIT  551 (1080)
T ss_pred             ccCceEEEEehhhhh-------hhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhccccccee
Confidence            999999999986332       223347999999999985   3577999999999999 54 33444444333333   


Q ss_pred             ----------------------------------------------ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE
Q psy15191        179 ----------------------------------------------TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL  212 (312)
Q Consensus       179 ----------------------------------------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  212 (312)
                                                                    .+..|+..|..+++++++.|+.|+|||+.++++.
T Consensus       552 svKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~  631 (1080)
T KOG1408|consen  552 SVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQV  631 (1080)
T ss_pred             EEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEecccccee
Confidence                                                          3556677777789999999999999999999999


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                      ..+++...    |++....+...|.|.|||+.+.|.++.++|+.++.            ++....||+..|+.+.|.+|-
T Consensus       632 k~FKgs~~----~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgE------------cvA~m~GHsE~VTG~kF~nDC  695 (1080)
T KOG1408|consen  632 KSFKGSRD----HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGE------------CVAQMTGHSEAVTGVKFLNDC  695 (1080)
T ss_pred             eeeccccc----CCCceEEEEECCCccEEEEeecCCceEEEEeccch------------hhhhhcCcchheeeeeecccc
Confidence            99988755    66778889999999999999999999999998884            788999999999999999999


Q ss_pred             CeEEEEecCCCcccceEEeC
Q psy15191        293 TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       293 ~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.|++.     +.||+|.||
T Consensus       696 kHlISv-----sgDgCIFvW  710 (1080)
T KOG1408|consen  696 KHLISV-----SGDGCIFVW  710 (1080)
T ss_pred             hhheee-----cCCceEEEE
Confidence            999999     677889999

>KOG0643|consensus

Probab=99.96  E-value=8e-27  Score=169.90  Aligned_cols=226  Identities=19%  Similarity=0.248  Sum_probs=183.9

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      .++||+.+++.+.|+.+      |.+|++|+.|.+..||-..+++.+        .+.++..+.+...+++|+.|.++++
T Consensus         5 ~l~GHERplTqiKyN~e------GDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL   78 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNRE------GDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL   78 (327)
T ss_pred             ccccCccccceEEecCC------CcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence            46799999999999999      999999999999999998777763        4445555667779999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-----CCeEEE-ecc-------cCceeeeecccCCce
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-----QGSLHL-DVT-------TWKQIQTLPCHQLTI  180 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~i~~-d~~-------~~~~~~~~~~~~~~v  180 (312)
                      ||+.+++.  +...+      ...+|..+.|+++|++++...+     .+.|.+ |++       .-++...+..+...+
T Consensus        79 WDv~tGk~--la~~k------~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ski  150 (327)
T KOG0643|consen   79 WDVETGKQ--LATWK------TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKI  150 (327)
T ss_pred             EEcCCCcE--EEEee------cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccce
Confidence            99999554  34433      3467899999999999887654     345666 555       334455566788999


Q ss_pred             eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        181 TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      +.+-|.|-+++|++|.+||.|.+||++++..+......      |...|+.+.++||..++++++.|.+-++||+.+-  
T Consensus       151 t~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl--  222 (327)
T KOG0643|consen  151 TSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL--  222 (327)
T ss_pred             eeeeecccCCEEEEecCCCcEEEEEcccCceeeechhh------hccccccccccCCcceEEecccCccceeeeccce--
Confidence            99999999999999999999999999987665443322      8889999999999999999999999999999886  


Q ss_pred             CcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                                 .+.+-.....+|++.+++|....++.|+.
T Consensus       223 -----------~v~Kty~te~PvN~aaisP~~d~VilgGG  251 (327)
T KOG0643|consen  223 -----------EVLKTYTTERPVNTAAISPLLDHVILGGG  251 (327)
T ss_pred             -----------eeEEEeeecccccceecccccceEEecCC
Confidence                       33333445789999999999888888764

>KOG0300|consensus

Probab=99.96  E-value=1.2e-27  Score=178.61  Aligned_cols=255  Identities=20%  Similarity=0.234  Sum_probs=201.1

Q ss_pred             eEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191         15 KVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK   75 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg   75 (312)
                      +++..+.||++.|+.++                   |+.++++++.++.||.+.|+++.|++.      +.++++++.|+
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s------~~L~lTaSGD~  212 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNS------GLLLLTASGDE  212 (481)
T ss_pred             eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccc------cceEEEccCCc
Confidence            35566778988888776                   999999999999999999999999999      89999999999


Q ss_pred             cEEEeeec----CCcc--------------------------------------------cccccccCCCCCceEEEEeC
Q psy15191         76 TAILWKYV----SEGN--------------------------------------------YLPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        76 ~i~vw~~~----~~~~--------------------------------------------~~~~~~~~~~~~~~l~~~~~  107 (312)
                      +..||...    ....                                            ..+..+.+-..+..+++++.
T Consensus       213 taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSW  292 (481)
T KOG0300|consen  213 TAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASW  292 (481)
T ss_pred             chHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeec
Confidence            99999621    1100                                            01222233345668999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCcee------eeecccCCcee
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQI------QTLPCHQLTIT  181 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~------~~~~~~~~~v~  181 (312)
                      |++-.+||+++++.       +..+.+|....+.++-+|..+++++.+.|...++    |+..      ..+++|...|+
T Consensus       293 DRTAnlwDVEtge~-------v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRL----WDFReaI~sV~VFQGHtdtVT  361 (481)
T KOG0300|consen  293 DRTANLWDVETGEV-------VNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRL----WDFREAIQSVAVFQGHTDTVT  361 (481)
T ss_pred             cccceeeeeccCce-------eccccCcchhccccccCCcceEEEEeccCceeEe----ccchhhcceeeeeccccccee
Confidence            99999999998542       2334589999999999999999999999999999    7654      34669999999


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      ++.|..+. .+++|+.|.+|++||+++.. ++..+.        ...+++.++.+..++.++.--.+..|++||+.....
T Consensus       362 S~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR--------tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rl  432 (481)
T KOG0300|consen  362 SVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR--------TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRL  432 (481)
T ss_pred             EEEEecCC-ceeecCCCceEEEeeeccccCcceeee--------cCCccceeEeecCCceEEeccCCceEEEEecCCCcc
Confidence            99998765 58899999999999999765 344444        667789999998888888888888999999976532


Q ss_pred             CcccccccccceeEEeeccCcceeEEEeccCC--CeEEEEecCCC
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG--TLLASACKATK  303 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~s~d~~  303 (312)
                      ..-        +-..-++|..-|.+++|..+-  .-|++++.|.+
T Consensus       433 aRl--------PrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~  469 (481)
T KOG0300|consen  433 ARL--------PRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRM  469 (481)
T ss_pred             ccC--------CcccccccceeeeeeeccccCcccccccccccce
Confidence            110        222345899999999997543  45788876666

>KOG1332|consensus

Probab=99.96  E-value=3.1e-28  Score=175.01  Aligned_cols=238  Identities=21%  Similarity=0.373  Sum_probs=179.7

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------------ccccccCCCCCceEEEEeCCC
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      ..|.+.|..+...--      |++||||+.|++|+|+..++....              .+.+.+ ...|.+|++++.||
T Consensus         8 t~H~D~IHda~lDyy------gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wah-Pk~G~iLAScsYDg   80 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYY------GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAH-PKFGTILASCSYDG   80 (299)
T ss_pred             hhhhhhhhHhhhhhh------cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecc-cccCcEeeEeecCc
Confidence            467777777665444      889999999999999999876641              122211 23577999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE---ecc-cCceeeeecccCCceeEE
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL---DVT-TWKQIQTLPCHQLTITQL  183 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~---d~~-~~~~~~~~~~~~~~v~~~  183 (312)
                      .|.||.-..+  .+.   +......|...|++++|.|.  |-.|++++.||.|.+   +.. .|+.......|.-.|+++
T Consensus        81 kVIiWke~~g--~w~---k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsV  155 (299)
T KOG1332|consen   81 KVIIWKEENG--RWT---KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSV  155 (299)
T ss_pred             eEEEEecCCC--chh---hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccccccee
Confidence            9999987764  222   22334578999999999984  667899999999998   333 566666777999999999


Q ss_pred             EECCC---C-----------CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC----ceEEEec
Q psy15191        184 AFSPD---D-----------THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS----RYFLTIS  245 (312)
Q Consensus       184 ~~~~~---~-----------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~s~~  245 (312)
                      +|.|-   |           +.|++|+.|..|+||+....+-...     .....|...|..++|.|.-    .+||+++
T Consensus       156 swapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e-----~~l~~H~dwVRDVAwaP~~gl~~s~iAS~S  230 (299)
T KOG1332|consen  156 SWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLE-----RTLEGHKDWVRDVAWAPSVGLPKSTIASCS  230 (299)
T ss_pred             eecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhh-----hhhhhcchhhhhhhhccccCCCceeeEEec
Confidence            99995   4           5799999999999999987522111     1112299999999999964    4899999


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .||+|.||-......        .| ....+......+..+.||+.|+.|+.++.|++     |.+|
T Consensus       231 qDg~viIwt~~~e~e--------~w-k~tll~~f~~~~w~vSWS~sGn~LaVs~GdNk-----vtlw  283 (299)
T KOG1332|consen  231 QDGTVIIWTKDEEYE--------PW-KKTLLEEFPDVVWRVSWSLSGNILAVSGGDNK-----VTLW  283 (299)
T ss_pred             CCCcEEEEEecCccC--------cc-cccccccCCcceEEEEEeccccEEEEecCCcE-----EEEE
Confidence            999999997763311        12 12223335678999999999999999977776     9988

>KOG0641|consensus

Probab=99.96  E-value=4.6e-26  Score=162.48  Aligned_cols=247  Identities=17%  Similarity=0.120  Sum_probs=195.9

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec------CCcc-----------------ccccccc
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV------SEGN-----------------YLPYHMR   94 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~------~~~~-----------------~~~~~~~   94 (312)
                      +.+..+. ....|.+++|+|.      |.+.+.|+...+++|--..      ....                 -.+.+..
T Consensus        24 ~~i~~l~-dsqairav~fhp~------g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~   96 (350)
T KOG0641|consen   24 EAINILE-DSQAIRAVAFHPA------GGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTA   96 (350)
T ss_pred             EEEEEec-chhheeeEEecCC------CceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEE
Confidence            3455555 4578999999999      9999999999998886432      1111                 2567778


Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC----CCCeEEEee-cCCeEEE-ecccCc
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP----RGDYIIAHG-FQGSLHL-DVTTWK  168 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~-~~~~i~~-d~~~~~  168 (312)
                      +++.+.++++|+.|.+|++...+.....  ......++.-|.+.|..++|-.    .+..|++++ .|..|++ |...++
T Consensus        97 ws~~geliatgsndk~ik~l~fn~dt~~--~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~  174 (350)
T KOG0641|consen   97 WSPCGELIATGSNDKTIKVLPFNADTCN--ATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ  174 (350)
T ss_pred             ecCccCeEEecCCCceEEEEeccccccc--ccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC
Confidence            8999999999999999999877663322  2223334456888999999954    345566654 5667888 998899


Q ss_pred             eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        169 QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       169 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      ....+.+|.+.|..+- +-++-++++|+.|.+|++||++-...+..+.............|.+++..|.|++|++|-.|.
T Consensus       175 ~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~ds  253 (350)
T KOG0641|consen  175 GFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADS  253 (350)
T ss_pred             cceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCC
Confidence            8989999999998773 346889999999999999999988877766544333333557899999999999999999999


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      ...+||++.+.            .++.+..|...|.++.|||...+|+++|.|.+     |++
T Consensus       254 sc~lydirg~r------------~iq~f~phsadir~vrfsp~a~yllt~syd~~-----ikl  299 (350)
T KOG0641|consen  254 SCMLYDIRGGR------------MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMK-----IKL  299 (350)
T ss_pred             ceEEEEeeCCc------------eeeeeCCCccceeEEEeCCCceEEEEecccce-----EEE
Confidence            99999999873            78899999999999999999999999977766     875

>KOG0294|consensus

Probab=99.96  E-value=6.2e-27  Score=174.22  Aligned_cols=228  Identities=17%  Similarity=0.237  Sum_probs=177.8

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCC--ceEEEEeCC
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQ--LHLLSCSMD  108 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~--~~l~~~~~d  108 (312)
                      ++..+..|.++|++++.+        +.++|+||.|-+|+|||+.......        +..+.+.+..  ..|++|+.|
T Consensus        35 ~lF~~~aH~~sitavAVs--------~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdD  106 (362)
T KOG0294|consen   35 PLFAFSAHAGSITALAVS--------GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDD  106 (362)
T ss_pred             ccccccccccceeEEEec--------ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCC
Confidence            366778999999999985        5699999999999999998876532        2222222222  279999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----ccCCceeEEE
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----CHQLTITQLA  184 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----~~~~~v~~~~  184 (312)
                      |.|.+|+...-  ..+..+     .+|...|+.++.+|.+++.++.+.|+.+++    |++++...    .-....+.+.
T Consensus       107 G~i~iw~~~~W--~~~~sl-----K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~----WNLV~Gr~a~v~~L~~~at~v~  175 (362)
T KOG0294|consen  107 GHIIIWRVGSW--ELLKSL-----KAHKGQVTDLSIHPSGKLALSVGGDQVLRT----WNLVRGRVAFVLNLKNKATLVS  175 (362)
T ss_pred             CcEEEEEcCCe--EEeeee-----cccccccceeEecCCCceEEEEcCCceeee----ehhhcCccceeeccCCcceeeE
Confidence            99999998863  333333     488889999999999999999999999999    88776533    1223345599


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      |+|.|.+++.++.+ .|-+|.+.+...+..+.        ....+.++.|. ++.+|++|..|+.|.+||.....     
T Consensus       176 w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~--------~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~-----  240 (362)
T KOG0294|consen  176 WSPQGDHFVVSGRN-KIDIYQLDNASVFREIE--------NPKRILCATFL-DGSELLVGGDNEWISLKDTDSDT-----  240 (362)
T ss_pred             EcCCCCEEEEEecc-EEEEEecccHhHhhhhh--------ccccceeeeec-CCceEEEecCCceEEEeccCCCc-----
Confidence            99999999888766 58899988766555444        23446666665 67789999999999999988743     


Q ss_pred             ccccccceeEEeeccCcceeEEEe--ccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAA--SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                             +...+.+|...|.++.+  .|++.+|+|+|.||.     |+||
T Consensus       241 -------~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~-----I~vW  278 (362)
T KOG0294|consen  241 -------PLTEFLAHENRVKDIASYTNPEHEYLVTASSDGF-----IKVW  278 (362)
T ss_pred             -------cceeeecchhheeeeEEEecCCceEEEEeccCce-----EEEE
Confidence                   67888999999999985  677899999966666     9999

>KOG0310|consensus

Probab=99.96  E-value=1.3e-26  Score=181.82  Aligned_cols=230  Identities=16%  Similarity=0.163  Sum_probs=177.7

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCC-CCCceEEEEeCCCc
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDD-SKQLHLLSCSMDKS  110 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~-~~~~~l~~~~~d~~  110 (312)
                      .+++.-....|.++.|..|      |++||.|+..|.|+|+|+.+...+        .+....++ .++..+++|+.|+.
T Consensus        61 ~k~~srFk~~v~s~~fR~D------G~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v  134 (487)
T KOG0310|consen   61 RKTFSRFKDVVYSVDFRSD------GRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKV  134 (487)
T ss_pred             hhhHHhhccceeEEEeecC------CeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCce
Confidence            3344456778999999998      999999999999999996552221        22222223 34557888999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCc-eeeeecccCCceeEEEECC
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWK-QIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~~~~v~~~~~~~  187 (312)
                      +++||+.+..  .     ...+.+|...|.+.+|+|.. ..+++|+.||.|++ |.++-. .+.++ .|..+|..+.+-|
T Consensus       135 ~k~~d~s~a~--v-----~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lp  206 (487)
T KOG0310|consen  135 VKYWDLSTAY--V-----QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALP  206 (487)
T ss_pred             EEEEEcCCcE--E-----EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcC
Confidence            9999999854  1     22345899999999999964 57889999999999 555542 22333 5999999999999


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      .|..+++++ ...+++||+.++.+.......      |...|+|+++..++..|++|+-|+.|++||+.+-         
T Consensus       207 sgs~iasAg-Gn~vkVWDl~~G~qll~~~~~------H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~---------  270 (487)
T KOG0310|consen  207 SGSLIASAG-GNSVKVWDLTTGGQLLTSMFN------HNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY---------  270 (487)
T ss_pred             CCCEEEEcC-CCeEEEEEecCCceehhhhhc------ccceEEEEEeecCCceEeecccccceEEEEccce---------
Confidence            999999886 557999999976665443332      8888999999999999999999999999996554         


Q ss_pred             cccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        268 TLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                         +.+..+. -.++|.+++.+|+++.++.|-.||.
T Consensus       271 ---Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGl  302 (487)
T KOG0310|consen  271 ---KVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGL  302 (487)
T ss_pred             ---EEEEeee-cccceeeEEecCCCceEEEecccce
Confidence               2344443 5789999999999999999955443

>KOG0310|consensus

Probab=99.96  E-value=2.8e-27  Score=185.43  Aligned_cols=228  Identities=16%  Similarity=0.175  Sum_probs=179.1

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  118 (312)
                      .+.|.+++|+|.   +|+ ...+|+|  -.+.||+..+....        .+....+-.+|.++++|...|.|++||+.+
T Consensus        26 ~~~vssl~fsp~---~P~-d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~   99 (487)
T KOG0310|consen   26 HNSVSSLCFSPK---HPY-DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS   99 (487)
T ss_pred             cCcceeEecCCC---CCC-ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence            378999999997   342 2344444  36999998776542        233445567888999999999999999665


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCC-CCEEEEE
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD-DTHLVSV  195 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~  195 (312)
                        ..     .+..+..|+.++....|+|+++ .+++|++|+.+++ |+.+......+.+|++.|.+.+|+|. +..++||
T Consensus       100 --r~-----iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtG  172 (487)
T KOG0310|consen  100 --RV-----ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTG  172 (487)
T ss_pred             --HH-----HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEec
Confidence              21     2233458999999999999655 5667778888888 66666665577899999999999994 5589999


Q ss_pred             ecCCeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE
Q psy15191        196 SRDRRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ  274 (312)
Q Consensus       196 ~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  274 (312)
                      +.||.|++||++.. .....+.        |..+|..+.+-|.|..+|+++.. .|+|||+..+..           .+.
T Consensus       173 sYDg~vrl~DtR~~~~~v~eln--------hg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~q-----------ll~  232 (487)
T KOG0310|consen  173 SYDGKVRLWDTRSLTSRVVELN--------HGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQ-----------LLT  232 (487)
T ss_pred             CCCceEEEEEeccCCceeEEec--------CCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCce-----------ehh
Confidence            99999999999987 4444444        89999999999999999998754 699999987743           455


Q ss_pred             EeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        275 KLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       275 ~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ....|...|+|+.+..++..|++||.|+.     |+++
T Consensus       233 ~~~~H~KtVTcL~l~s~~~rLlS~sLD~~-----VKVf  265 (487)
T KOG0310|consen  233 SMFNHNKTVTCLRLASDSTRLLSGSLDRH-----VKVF  265 (487)
T ss_pred             hhhcccceEEEEEeecCCceEeecccccc-----eEEE
Confidence            55569999999999999999999977766     8875

>KOG1063|consensus

Probab=99.96  E-value=1.1e-26  Score=189.29  Aligned_cols=284  Identities=29%  Similarity=0.452  Sum_probs=217.9

Q ss_pred             CCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----   87 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----   87 (312)
                      .+..+..+.+.+..|.-.....+..+.+..+.||.+.|.+++|...   ..+..+|||+|.|..||||.+.-...     
T Consensus       157 ~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~---~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~  233 (764)
T KOG1063|consen  157 NKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARL---GGDDLLLASSSQDRYIRIWRIVLGDDEDSNE  233 (764)
T ss_pred             CCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhcc---CCCcEEEEecCCceEEEEEEEEecCCccccc
Confidence            4555555554444443333445566888999999999999999776   22345899999999999998754331     


Q ss_pred             ---------------------c-------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccC
Q psy15191         88 ---------------------Y-------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVG  133 (312)
Q Consensus        88 ---------------------~-------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  133 (312)
                                           +             =+....++|.+..|++++.|.++.+|...+..+.++...++..+.
T Consensus       234 ~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~g  313 (764)
T KOG1063|consen  234 REDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVG  313 (764)
T ss_pred             cccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeeccc
Confidence                                 0             122233467777899999999999999999889999999999988


Q ss_pred             CCccceeEEEECCCCCeEEEeecCCeEEE----ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccC-
Q psy15191        134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL----DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS-  208 (312)
Q Consensus       134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~----d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-  208 (312)
                      +.....++.-|+|+++.+++-+..|..++    |...|.......+|.+.|.+++|+|.|.+|++.+.|.+-|+|-.-. 
T Consensus       314 g~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~  393 (764)
T KOG1063|consen  314 GSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGR  393 (764)
T ss_pred             ccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccccc
Confidence            88888999999999999999999999999    3444555556669999999999999999999999999988875431 


Q ss_pred             --------------------------------------------------------------------------------
Q psy15191        209 --------------------------------------------------------------------------------  208 (312)
Q Consensus       209 --------------------------------------------------------------------------------  208 (312)
                                                                                                      
T Consensus       394 q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa  473 (764)
T KOG1063|consen  394 QQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKA  473 (764)
T ss_pred             ccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCC
Confidence                                                                                            


Q ss_pred             ---------------------------------------------------CCe--------------------------
Q psy15191        209 ---------------------------------------------------SGR--------------------------  211 (312)
Q Consensus       209 ---------------------------------------------------~~~--------------------------  211 (312)
                                                                         +..                          
T Consensus       474 ~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAv  553 (764)
T KOG1063|consen  474 FFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAV  553 (764)
T ss_pred             CcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceE
Confidence                                                               000                          


Q ss_pred             EEEEecc----CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEE
Q psy15191        212 LSLVACS----DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA  287 (312)
Q Consensus       212 ~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  287 (312)
                      +......    ......|.-.|+.++||||+++|++.+.|.++.+|..........        ....++.|..-|.+..
T Consensus       554 I~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~--------~fa~~k~HtRIIWdcs  625 (764)
T KOG1063|consen  554 IRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEF--------RFACLKAHTRIIWDCS  625 (764)
T ss_pred             EEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhh--------hhccccccceEEEEcc
Confidence            0000000    000122888999999999999999999999999998865533221        2344778999999999


Q ss_pred             eccCCCeEEEEecCCCcccceEEeC
Q psy15191        288 ASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       288 ~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+|++.+++|+|.|.+     |+||
T Consensus       626 W~pde~~FaTaSRDK~-----VkVW  645 (764)
T KOG1063|consen  626 WSPDEKYFATASRDKK-----VKVW  645 (764)
T ss_pred             cCcccceeEEecCCce-----EEEE
Confidence            9999999999988887     9998

>KOG1274|consensus

Probab=99.96  E-value=2e-26  Score=193.35  Aligned_cols=238  Identities=18%  Similarity=0.189  Sum_probs=193.0

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC-cc---cc---cccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE-GN---YL---PYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~-~~---~~---~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      +|...-+.++|.|+      |..|.+++.||.|++|+.... +.   ..   .........+.+|++++.+++|.+|.+.
T Consensus        11 aht~G~t~i~~d~~------gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fp   84 (933)
T KOG1274|consen   11 AHTGGLTLICYDPD------GEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFP   84 (933)
T ss_pred             hccCceEEEEEcCC------CCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCC
Confidence            68888999999999      899999999999999987665 21   11   1111223344589999999999999988


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ..+..-+..       ....++.+++|+.+|++++.|+.|-.|++ ++.+......+.+|.++|.++.|+|++++||+.+
T Consensus        85 s~~~~~iL~-------Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss  157 (933)
T KOG1274|consen   85 SGEEDTILA-------RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSS  157 (933)
T ss_pred             CCCccceee-------eeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEe
Confidence            755432211       23467899999999999999999999999 8888888889999999999999999999999999


Q ss_pred             cCCeEEEEEccCCCeEEEEeccCCCCccc-ceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        197 RDRRWGLYKRQSSGRLSLVACSDKTNGVH-KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       197 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      .||.|++||+.++.....+.......... ...+..++|+|+|..|+..+.|+.|++|+...-            .....
T Consensus       158 ~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~w------------e~~f~  225 (933)
T KOG1274|consen  158 CDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGW------------ELQFK  225 (933)
T ss_pred             cCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCc------------eehee
Confidence            99999999999888777776655444333 567788999999888999999999999986654            45555


Q ss_pred             eec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        276 LYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       276 ~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..  +...+..+.|+|+|+|||+++.|++     |.||
T Consensus       226 Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~-----I~vW  259 (933)
T KOG1274|consen  226 LRDKLSSSKFSDLQWSPNGKYIAASTLDGQ-----ILVW  259 (933)
T ss_pred             ecccccccceEEEEEcCCCcEEeeeccCCc-----EEEE
Confidence            543  4555999999999999999966666     9999

>KOG0299|consensus

Probab=99.96  E-value=1.7e-26  Score=179.88  Aligned_cols=229  Identities=19%  Similarity=0.192  Sum_probs=183.5

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------ccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------YHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      ++|...+.+++.+++      |++||+|+.|..|.||+.++.+....        ....+-.....+++++.|+.|++|+
T Consensus       199 ~~h~keil~~avS~D------gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~  272 (479)
T KOG0299|consen  199 KGHVKEILTLAVSSD------GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWS  272 (479)
T ss_pred             ccccceeEEEEEcCC------CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEe
Confidence            378899999999999      99999999999999999998876432        3333333445799999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeee----ecccCCceeEEEECCCCCE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQT----LPCHQLTITQLAFSPDDTH  191 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~----~~~~~~~v~~~~~~~~~~~  191 (312)
                      ++..  ..+     ..+.+|...|.++.....++.+-+|+.|+++++    |++...    +.++.+.+-+++|-. ...
T Consensus       273 ~~~~--s~v-----etlyGHqd~v~~IdaL~reR~vtVGgrDrT~rl----wKi~eesqlifrg~~~sidcv~~In-~~H  340 (479)
T KOG0299|consen  273 IDQL--SYV-----ETLYGHQDGVLGIDALSRERCVTVGGRDRTVRL----WKIPEESQLIFRGGEGSIDCVAFIN-DEH  340 (479)
T ss_pred             hhHh--HHH-----HHHhCCccceeeechhcccceEEeccccceeEE----EeccccceeeeeCCCCCeeeEEEec-ccc
Confidence            9862  222     233489999999998888888888999999999    776443    448888999999974 567


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-----cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-----HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                      |++|+.||.|.+|++...+++......+.....     +..+|++++..|...++|+|+.+|+|++|-+..+...-    
T Consensus       341 fvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i----  416 (479)
T KOG0299|consen  341 FVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAI----  416 (479)
T ss_pred             eeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCcccc----
Confidence            999999999999999999988877655433221     33489999999999999999999999999998884321    


Q ss_pred             ccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                          .++..+. -.+.|++++|+++|+.|++|-
T Consensus       417 ----~~l~~ls-~~GfVNsl~f~~sgk~ivagi  444 (479)
T KOG0299|consen  417 ----NLLYSLS-LVGFVNSLAFSNSGKRIVAGI  444 (479)
T ss_pred             ----ceeeecc-cccEEEEEEEccCCCEEEEec
Confidence                2455555 467899999999999777764

>KOG0641|consensus

Probab=99.96  E-value=2.9e-25  Score=158.42  Aligned_cols=235  Identities=17%  Similarity=0.164  Sum_probs=176.7

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------cccccccCCCCCce-EEEEe
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------YLPYHMRDDSKQLH-LLSCS  106 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------~~~~~~~~~~~~~~-l~~~~  106 (312)
                      +.|.+.|.|.+|+|+      |.+|++|+.|.+|++..++...+                ..+.++.....+.. |++++
T Consensus        86 khhkgsiyc~~ws~~------geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~g  159 (350)
T KOG0641|consen   86 KHHKGSIYCTAWSPC------GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAG  159 (350)
T ss_pred             cccCccEEEEEecCc------cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecC
Confidence            458899999999999      99999999999999986654433                23344444443334 44433


Q ss_pred             -CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-------ccC
Q psy15191        107 -MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-------CHQ  177 (312)
Q Consensus       107 -~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-------~~~  177 (312)
                       .|..|++-|..++++  ..     .+.+|.+.|.++ ++-++-.+++|+.|..|++ |++-...+..+.       -..
T Consensus       160 agdc~iy~tdc~~g~~--~~-----a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~gles  231 (350)
T KOG0641|consen  160 AGDCKIYITDCGRGQG--FH-----ALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLES  231 (350)
T ss_pred             CCcceEEEeecCCCCc--ce-----eecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCccc
Confidence             344555556555332  22     234788888765 4557889999999999999 333222222222       123


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ..|..++..|.|++|++|-.|....+||++.++.++.+..       |...|.++.|+|...|+++++.|..|++-|+..
T Consensus       232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~p-------hsadir~vrfsp~a~yllt~syd~~ikltdlqg  304 (350)
T KOG0641|consen  232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHP-------HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG  304 (350)
T ss_pred             ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCC-------CccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence            6789999999999999999999999999999999888776       899999999999999999999999999999876


Q ss_pred             CCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        258 PPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .-..+-        ++.....|...+..+.|+|..--+++.|.|.+     +.+|
T Consensus       305 dla~el--------~~~vv~ehkdk~i~~rwh~~d~sfisssadkt-----~tlw  346 (350)
T KOG0641|consen  305 DLAHEL--------PIMVVAEHKDKAIQCRWHPQDFSFISSSADKT-----ATLW  346 (350)
T ss_pred             chhhcC--------ceEEEEeccCceEEEEecCccceeeeccCcce-----EEEe
Confidence            532211        45556679999999999999988999966666     8888

>KOG4283|consensus

Probab=99.96  E-value=9.1e-27  Score=172.05  Aligned_cols=265  Identities=19%  Similarity=0.220  Sum_probs=193.1

Q ss_pred             ceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------------
Q psy15191         26 KVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------------   87 (312)
Q Consensus        26 ~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------------   87 (312)
                      .|..+..+++    ......|.+.|+++...+.     .|+++++|+.||.|.+||+++...                  
T Consensus        26 Ril~L~Ln~d----~d~~r~HgGsvNsL~id~t-----egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h   96 (397)
T KOG4283|consen   26 RILSLQLNND----KDFVRPHGGSVNSLQIDLT-----EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQH   96 (397)
T ss_pred             hhheeeccCC----cceeccCCCccceeeeccc-----cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccC
Confidence            4555555543    2334468899999999886     589999999999999999987542                  


Q ss_pred             -----cccccccC-CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC---CCeEEEeecCC
Q psy15191         88 -----YLPYHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR---GDYIIAHGFQG  158 (312)
Q Consensus        88 -----~~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~  158 (312)
                           +.+....+ .-+...+.+++.|.++++||..+.+.....+        -+..|++-+++|-   .-++++|..+-
T Consensus        97 ~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~--------me~~VYshamSp~a~sHcLiA~gtr~~  168 (397)
T KOG4283|consen   97 ENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK--------MEGKVYSHAMSPMAMSHCLIAAGTRDV  168 (397)
T ss_pred             CccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee--------cCceeehhhcChhhhcceEEEEecCCC
Confidence                 11111111 1234488999999999999999844332222        2355777788883   33577788888


Q ss_pred             eEEE-ecccCceeeeecccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCC-CeEEEEeccC-------CCCccccee
Q psy15191        159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSS-GRLSLVACSD-------KTNGVHKRI  228 (312)
Q Consensus       159 ~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~-------~~~~~~~~~  228 (312)
                      .|++ |+.++.....+.+|.+.|..+.|+|... .|++|+.||.|++||++.. ..+..+....       +....|.+.
T Consensus       169 ~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gk  248 (397)
T KOG4283|consen  169 QVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGK  248 (397)
T ss_pred             cEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccce
Confidence            9999 9999999999999999999999999766 4678999999999999875 4444443322       113338899


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc-----------------------------------ccccee
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN-----------------------------------TLWPEV  273 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------------------------------~~~~~~  273 (312)
                      +++++|+.++.++++++.|..+++|+...+.........                                   -....+
T Consensus       249 vngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~i  328 (397)
T KOG4283|consen  249 VNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFV  328 (397)
T ss_pred             eeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEE
Confidence            999999999999999999999999998877543221100                                   011245


Q ss_pred             EEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        274 QKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       274 ~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..+..|...|.+.++-|+-+.+.+|..|     +.|..|
T Consensus       329 r~l~~h~k~i~c~~~~~~fq~~~tg~~d-----~ni~~w  362 (397)
T KOG4283|consen  329 RRLSTHLKRINCAAYRPDFEQCFTGDMN-----GNIYMW  362 (397)
T ss_pred             EeeecccceeeEEeecCchhhhhccccC-----Cccccc
Confidence            5666777788888888888888888444     448776

>KOG0973|consensus

Probab=99.96  E-value=2.9e-26  Score=195.69  Aligned_cols=238  Identities=20%  Similarity=0.269  Sum_probs=186.4

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----------c----------------ccc
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----------N----------------YLP   90 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----------~----------------~~~   90 (312)
                      .+.+.+...|.+.|+|+.|+|+      |++||+|+.|+.|.||......          .                ..+
T Consensus        59 ~k~l~~m~~h~~sv~CVR~S~d------G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV  132 (942)
T KOG0973|consen   59 PKHLCTMDDHDGSVNCVRFSPD------GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDV  132 (942)
T ss_pred             chhheeeccccCceeEEEECCC------CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCcc
Confidence            3556778889999999999999      9999999999999999988310          0                134


Q ss_pred             ccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce
Q psy15191         91 YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ  169 (312)
Q Consensus        91 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~  169 (312)
                      .-..++|++.++++++.|++|.+|+..+.  ..+..+     .+|...|..+.|.|-|+++++-+.|+.+++ .+.+|.+
T Consensus       133 ~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF--~~~~vl-----~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i  205 (942)
T KOG0973|consen  133 LDVNWSPDDSLLVSVSLDNSVIIWNAKTF--ELLKVL-----RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGI  205 (942)
T ss_pred             ceeccCCCccEEEEecccceEEEEccccc--eeeeee-----ecccccccceEECCccCeeeeecCCceEEEEEccccee
Confidence            45556788899999999999999999884  333333     489999999999999999999999999999 6667777


Q ss_pred             eeeeccc------CCceeEEEECCCCCEEEEEec----CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC---
Q psy15191        170 IQTLPCH------QLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH---  236 (312)
Q Consensus       170 ~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---  236 (312)
                      .+.+.++      ...+..+.|||||.+|++...    -..+.|.+-.+.+.-..+-+       |..++.+++|+|   
T Consensus       206 ~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvG-------H~~p~evvrFnP~lf  278 (942)
T KOG0973|consen  206 EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVG-------HSAPVEVVRFNPKLF  278 (942)
T ss_pred             eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeec-------CCCceEEEEeChHHh
Confidence            7766532      446789999999999998642    23477777666554444444       888999999998   


Q ss_pred             --C--------Cc----eEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEEecC
Q psy15191        237 --D--------SR----YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       237 --~--------~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                        .        +.    .+|+|+.|++|.||......            ++... .-....|.+++|+|||..|..+|.|
T Consensus       279 e~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~R------------Pl~vi~~lf~~SI~DmsWspdG~~LfacS~D  346 (942)
T KOG0973|consen  279 ERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPR------------PLFVIHNLFNKSIVDMSWSPDGFSLFACSLD  346 (942)
T ss_pred             ccccccCCccCCCcceEEEEEecCCccEEEEecCCCC------------chhhhhhhhcCceeeeeEcCCCCeEEEEecC
Confidence              1        11    67899999999999886553            22222 2245789999999999999999766


Q ss_pred             CCcccceEEe
Q psy15191        302 TKPEHAAIII  311 (312)
Q Consensus       302 ~~~~dg~i~i  311 (312)
                      |+     |.+
T Consensus       347 Gt-----V~~  351 (942)
T KOG0973|consen  347 GT-----VAL  351 (942)
T ss_pred             Ce-----EEE
Confidence            65     765

>KOG0973|consensus

Probab=99.95  E-value=7.9e-27  Score=199.13  Aligned_cols=242  Identities=14%  Similarity=0.242  Sum_probs=191.3

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEec--CCCcEEEeeecCCcc--------------------cccccccCCCCCceEEE
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCS--LDKTAILWKYVSEGN--------------------YLPYHMRDDSKQLHLLS  104 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vw~~~~~~~--------------------~~~~~~~~~~~~~~l~~  104 (312)
                      ...|.++..+|+      +..+|||+  .|+.++||+.+.-..                    ..+.+..++++|.+|++
T Consensus        13 ~~~IfSIdv~pd------g~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAs   86 (942)
T KOG0973|consen   13 EKSIFSIDVHPD------GVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLAS   86 (942)
T ss_pred             CeeEEEEEecCC------ceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEee
Confidence            456899999998      99999999  999999998754221                    25666778999999999


Q ss_pred             EeCCCcEEEEcCCCCc----------c-eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee
Q psy15191        105 CSMDKSIIVWAPDPTT----------G-LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT  172 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~----------~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~  172 (312)
                      |+.|+.|.||......          . ....-.....+.+|...|..++|+|++.++++++.|+.|.+ +.++++....
T Consensus        87 GSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~v  166 (942)
T KOG0973|consen   87 GSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKV  166 (942)
T ss_pred             ccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeee
Confidence            9999999999987300          0 00111123344579999999999999999999999999999 8888888899


Q ss_pred             ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CC---
Q psy15191        173 LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DG---  248 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg---  248 (312)
                      +.+|.+.|..+.|.|-|+||++-+.|++|++|++.+......+..+..... .......+.|||||++|++... ++   
T Consensus       167 l~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~-~~T~f~RlSWSPDG~~las~nA~n~~~~  245 (942)
T KOG0973|consen  167 LRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESP-LTTFFLRLSWSPDGHHLASPNAVNGGKS  245 (942)
T ss_pred             eecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCC-CcceeeecccCCCcCeecchhhccCCcc
Confidence            999999999999999999999999999999999887666666665443222 4556888999999999998753 21   


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC------C-------C----eEEEEecCCCcccceEEe
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD------G-------T----LLASACKATKPEHAAIII  311 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~-------~----~l~s~s~d~~~~dg~i~i  311 (312)
                      ++.|.+            ...|+.-..+.||.+++..++|+|.      .       .    .+|+||.     |++|-|
T Consensus       246 ~~~Iie------------R~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSq-----DrSlSV  308 (942)
T KOG0973|consen  246 TIAIIE------------RGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQ-----DRSLSV  308 (942)
T ss_pred             eeEEEe------------cCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecC-----CccEEE
Confidence            444443            4567788899999999999999972      1       1    5777854     555999


Q ss_pred             C
Q psy15191        312 W  312 (312)
Q Consensus       312 W  312 (312)
                      |
T Consensus       309 W  309 (942)
T KOG0973|consen  309 W  309 (942)
T ss_pred             E
Confidence            9

>KOG0640|consensus

Probab=99.95  E-value=4.6e-27  Score=174.81  Aligned_cols=205  Identities=18%  Similarity=0.230  Sum_probs=168.8

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC------cc--------------------ccccc
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE------GN--------------------YLPYH   92 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~------~~--------------------~~~~~   92 (312)
                      ....+..|..++.+.+|+|+      |.++|||+.|..|+|.|++.-      +.                    -.+..
T Consensus       104 Et~ylt~HK~~cR~aafs~D------G~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~  177 (430)
T KOG0640|consen  104 ETKYLTSHKSPCRAAAFSPD------GSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVND  177 (430)
T ss_pred             ceEEEeecccceeeeeeCCC------CcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccc
Confidence            34567789999999999999      999999999999999998621      00                    14555


Q ss_pred             ccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee
Q psy15191         93 MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ  171 (312)
Q Consensus        93 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~  171 (312)
                      +.++|....|++++.|++|++||+.......     .........+|.++.|+|.|.+|++|.....+++ |+.+.+...
T Consensus       178 l~FHPre~ILiS~srD~tvKlFDfsK~saKr-----A~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfv  252 (430)
T KOG0640|consen  178 LDFHPRETILISGSRDNTVKLFDFSKTSAKR-----AFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFV  252 (430)
T ss_pred             eeecchhheEEeccCCCeEEEEecccHHHHH-----HHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEee
Confidence            6678888899999999999999998633211     1111234567999999999999999999999999 888877654


Q ss_pred             eec---ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        172 TLP---CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       172 ~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      ...   .|.+.|+++.+++.+++.++++.||.|++||--+.+.+..+....     ....|.+..|..+++|+++.+.|.
T Consensus       253 sanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH-----~gsevcSa~Ftkn~kyiLsSG~DS  327 (430)
T KOG0640|consen  253 SANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAH-----GGSEVCSAVFTKNGKYILSSGKDS  327 (430)
T ss_pred             ecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhc-----CCceeeeEEEccCCeEEeecCCcc
Confidence            432   799999999999999999999999999999988877776665432     346799999999999999999999


Q ss_pred             eEEEEecCCCC
Q psy15191        249 VCVVWGLGEPP  259 (312)
Q Consensus       249 ~i~iwd~~~~~  259 (312)
                      .+++|.+.++.
T Consensus       328 ~vkLWEi~t~R  338 (430)
T KOG0640|consen  328 TVKLWEISTGR  338 (430)
T ss_pred             eeeeeeecCCc
Confidence            99999998874

>KOG0639|consensus

Probab=99.95  E-value=2.4e-27  Score=186.84  Aligned_cols=230  Identities=14%  Similarity=0.163  Sum_probs=191.2

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEEEEeCCCcE
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      .|..-|..+..+..      .+++.||+. |.|+|||+.....             ..+..+...+++..|++|+.-.++
T Consensus       417 ~HGEvVcAvtIS~~------trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastl  489 (705)
T KOG0639|consen  417 AHGEVVCAVTISNP------TRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTL  489 (705)
T ss_pred             ccCcEEEEEEecCC------cceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecccccee
Confidence            47777888888776      789999986 6799999976533             133444557889999999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      .|||+...+.......     .......++++.+||.+..+++..||.|.+ |+.+-.+++.+++|.+.+.||.+++||.
T Consensus       490 siWDLAapTprikael-----tssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGt  564 (705)
T KOG0639|consen  490 SIWDLAAPTPRIKAEL-----TSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGT  564 (705)
T ss_pred             eeeeccCCCcchhhhc-----CCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCc
Confidence            9999998654332222     233445788999999999999999999999 8888788889999999999999999999


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccc
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      .|.||+.|.+||.||+++...+....        ....|.++..+|.+.+|+.|-+++.+.|-.....            
T Consensus       565 klWTGGlDntvRcWDlregrqlqqhd--------F~SQIfSLg~cP~~dWlavGMens~vevlh~skp------------  624 (705)
T KOG0639|consen  565 KLWTGGLDNTVRCWDLREGRQLQQHD--------FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP------------  624 (705)
T ss_pred             eeecCCCccceeehhhhhhhhhhhhh--------hhhhheecccCCCccceeeecccCcEEEEecCCc------------
Confidence            99999999999999999988776554        5677999999999999999999999988877665            


Q ss_pred             ceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        271 PEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .-+.+..|++.|.++.|++.|+++++.+.|+-     +-.|
T Consensus       625 -~kyqlhlheScVLSlKFa~cGkwfvStGkDnl-----Lnaw  660 (705)
T KOG0639|consen  625 -EKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-----LNAW  660 (705)
T ss_pred             -cceeecccccEEEEEEecccCceeeecCchhh-----hhhc
Confidence             45667789999999999999999999977665     6555

>KOG0288|consensus

Probab=99.95  E-value=2.1e-27  Score=182.56  Aligned_cols=227  Identities=20%  Similarity=0.276  Sum_probs=179.4

Q ss_pred             eEeCCCCe--EEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          8 VVNGEGGK--VLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         8 v~~~~~~~--~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      +|+...++  .+.+|.|-.+.|+.+.                   |+.+..+...+|.||++.|+++.|...      ..
T Consensus       201 ~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~------~~  274 (459)
T KOG0288|consen  201 LWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLS------HS  274 (459)
T ss_pred             hhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhcc------cc
Confidence            45554444  5566666666666665                   777778888899999999999999877      55


Q ss_pred             eEEEecCCCcEEEeeecCCcccccccccCC-----CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNYLPYHMRDD-----SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      .+++|+.|.+|++||+....+....+....     .....++++-.|++|++||+++....  ...+      -.+.|++
T Consensus       275 ~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~--~sv~------~gg~vtS  346 (459)
T KOG0288|consen  275 RVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKT--RSVP------LGGRVTS  346 (459)
T ss_pred             ceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceEEEeccCCcee--eEee------cCcceee
Confidence            599999999999999998776432222111     11335788889999999999984432  2222      2347999


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecc----cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      +..++++..+++++.|..+.+ |+++..+...+.+    .....+.+.|||++.|+++|+.||.|+||++.+++....+.
T Consensus       347 l~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~  426 (459)
T KOG0288|consen  347 LDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLS  426 (459)
T ss_pred             EeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEec
Confidence            999999999999999999999 9999999888762    22348899999999999999999999999999988877776


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ...     ....|++++|+|.|..|++++.++.+.+|
T Consensus       427 ~s~-----s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  427 LST-----SNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             cCC-----CCcceEEEEEcCCCchhhcccCCcceEec
Confidence            542     22279999999999999999999999998

>KOG0308|consensus

Probab=99.95  E-value=2.3e-26  Score=186.35  Aligned_cols=216  Identities=17%  Similarity=0.238  Sum_probs=176.7

Q ss_pred             CCceEEEecCCCcEEEeeecCCccc--c--c-------ccc---cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGNY--L--P-------YHM---RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV  129 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~~--~--~-------~~~---~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  129 (312)
                      ++++|+|||+||.|++|+.......  .  +       -|.   ....++..|++++.|-+|++|+.......+..    
T Consensus        36 ~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~s----  111 (735)
T KOG0308|consen   36 NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMS----  111 (735)
T ss_pred             CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHh----
Confidence            4678999999999999998654431  0  0       010   01235558999999999999998874323333    


Q ss_pred             cccCCCccceeEEEE-CCCCCeEEEeecCCeEEE-ecccC--ceeee--------ec-ccCCceeEEEECCCCCEEEEEe
Q psy15191        130 GEVGGNTLGFYGCKF-GPRGDYIIAHGFQGSLHL-DVTTW--KQIQT--------LP-CHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       130 ~~~~~~~~~v~~~~~-~~~~~~l~~~~~~~~i~~-d~~~~--~~~~~--------~~-~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                       .+..|...|.|+++ .++...+++|+.|+.|.+ |+.+.  .+...        +. ++...|++++.++.|..+++|+
T Consensus       112 -tir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGg  190 (735)
T KOG0308|consen  112 -TIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGG  190 (735)
T ss_pred             -hhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecC
Confidence             33479999999999 788899999999999999 55443  11111        11 7888999999999999999999


Q ss_pred             cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191        197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL  276 (312)
Q Consensus       197 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  276 (312)
                      ..+.+++||.++.+.+..+.+       |...|..+..++||..+++++.||+|++||+....            ++.++
T Consensus       191 tek~lr~wDprt~~kimkLrG-------HTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQr------------Cl~T~  251 (735)
T KOG0308|consen  191 TEKDLRLWDPRTCKKIMKLRG-------HTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQR------------CLATY  251 (735)
T ss_pred             cccceEEeccccccceeeeec-------cccceEEEEEcCCCCeEeecCCCceEEeeeccccc------------eeeeE
Confidence            999999999999999888887       99999999999999999999999999999998763            88999


Q ss_pred             eccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        277 YGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       277 ~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ..|...|.++.-+|+-..+.+|+.|+.
T Consensus       252 ~vH~e~VWaL~~~~sf~~vYsG~rd~~  278 (735)
T KOG0308|consen  252 IVHKEGVWALQSSPSFTHVYSGGRDGN  278 (735)
T ss_pred             EeccCceEEEeeCCCcceEEecCCCCc
Confidence            999999999999999999999966554

>PTZ00420 coronin; Provisional

Probab=99.95  E-value=2e-25  Score=187.78  Aligned_cols=219  Identities=13%  Similarity=0.117  Sum_probs=157.6

Q ss_pred             EecCCCcEEEeeecCCcc--------cccccccCCCC-CceEEEEeCCCcEEEEcCCCCccee-eeeeeecccCCCccce
Q psy15191         70 SCSLDKTAILWKYVSEGN--------YLPYHMRDDSK-QLHLLSCSMDKSIIVWAPDPTTGLW-LETARVGEVGGNTLGF  139 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~v  139 (312)
                      .|+.++.|++|+......        ..+..+.++|. +.+|++|+.|+.|++||+.+..... ........+.+|...|
T Consensus        49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V  128 (568)
T PTZ00420         49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI  128 (568)
T ss_pred             CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence            366788999998655332        23444555664 6699999999999999997632110 0011122345788999


Q ss_pred             eEEEECCCCCe-EEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        140 YGCKFGPRGDY-IIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       140 ~~~~~~~~~~~-l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .+++|+|++.. +++++.|+.|++ |+++.+....+. |...|.+++|+|+|.+|++++.|+.|++||+++...+..+..
T Consensus       129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g  207 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI  207 (568)
T ss_pred             EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence            99999999876 468899999999 766666555554 667899999999999999999999999999999888776665


Q ss_pred             cCCCCccccee-----eEEEEEcCCCceEEEeccCC----eEEEEecCCCCCCcccccccccceeEE--eeccCcceeEE
Q psy15191        218 SDKTNGVHKRI-----IWGVAWSHDSRYFLTISRDG----VCVVWGLGEPPTEEDLVQNTLWPEVQK--LYGHGYEIYSL  286 (312)
Q Consensus       218 ~~~~~~~~~~~-----v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~  286 (312)
                             |.+.     +....|++++.+|++++.|+    .|+|||++....           ++..  +..+.+.+...
T Consensus       208 -------H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-----------pl~~~~ld~~~~~L~p~  269 (568)
T PTZ00420        208 -------HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS-----------ALVTMSIDNASAPLIPH  269 (568)
T ss_pred             -------ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC-----------ceEEEEecCCccceEEe
Confidence                   4433     33345678999999988764    799999986432           2333  33344444445


Q ss_pred             EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        287 AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       287 ~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...++|.++++|+.|     +.|++|
T Consensus       270 ~D~~tg~l~lsGkGD-----~tIr~~  290 (568)
T PTZ00420        270 YDESTGLIYLIGKGD-----GNCRYY  290 (568)
T ss_pred             eeCCCCCEEEEEECC-----CeEEEE
Confidence            556679999999554     449998

>KOG0646|consensus

Probab=99.95  E-value=1.4e-25  Score=175.15  Aligned_cols=263  Identities=19%  Similarity=0.260  Sum_probs=197.0

Q ss_pred             CCCceEEEEEeCCCCceEEEEccc-cCcEEEEEEecCcCcCCCCceEEEec-CCCcEEEeeecCCccc--------cccc
Q psy15191         23 HKSKVMAVKWNGEGGKVLYTLTNH-KSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKYVSEGNY--------LPYH   92 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~~--------~~~~   92 (312)
                      ...+.+++.|++.+|....++++- ...-.++....       +.+++++. ....+.+|.+......        .+..
T Consensus        14 S~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~-------~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~a   86 (476)
T KOG0646|consen   14 SFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTALN-------NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHA   86 (476)
T ss_pred             CCCCcceeEEecCCCceeEEecCcccccchhhhhhc-------hhheeeecccCccccccccCchhhhhhhcccccceee
Confidence            345677888999999999999875 22222222211       23555554 4457999998765542        2455


Q ss_pred             ccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE----ecc---
Q psy15191         93 MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL----DVT---  165 (312)
Q Consensus        93 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~----d~~---  165 (312)
                      .+.++.|.+++.|+..|.|++|.+.++..  +...     ..|-.+|+++.|+.|+.++++|+.||.|.+    ++-   
T Consensus        87 l~s~n~G~~l~ag~i~g~lYlWelssG~L--L~v~-----~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~  159 (476)
T KOG0646|consen   87 LASSNLGYFLLAGTISGNLYLWELSSGIL--LNVL-----SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD  159 (476)
T ss_pred             eecCCCceEEEeecccCcEEEEEeccccH--HHHH-----HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc
Confidence            56678888888888999999999998543  2222     378899999999999999999999999998    110   


Q ss_pred             ---cCceeeeecccCCceeEEEECCC--CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce
Q psy15191        166 ---TWKQIQTLPCHQLTITQLAFSPD--DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       166 ---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  240 (312)
                         +-.....+..|.-+|+++...+.  ..+++|++.|.++++||+..+..+..+.        ....+.+++.+|-++.
T Consensus       160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~--------fp~si~av~lDpae~~  231 (476)
T KOG0646|consen  160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT--------FPSSIKAVALDPAERV  231 (476)
T ss_pred             cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe--------cCCcceeEEEcccccE
Confidence               11233445589999999988764  4589999999999999999988877776        5667999999999999


Q ss_pred             EEEeccCCeEEEEecCCCCCCcccccc----cccceeEEeeccCc--ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        241 FLTISRDGVCVVWGLGEPPTEEDLVQN----TLWPEVQKLYGHGY--EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       241 l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++.|+++|.|.+.++..-+....-+..    ..-..+..+.||.+  .|++++.+-||.+|++|     ++||.|+||
T Consensus       232 ~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSG-----d~dg~VcvW  304 (476)
T KOG0646|consen  232 VYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSG-----DEDGKVCVW  304 (476)
T ss_pred             EEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEee-----CCCCCEEEE
Confidence            999999999999988655421110000    01125677889988  99999999999999999     555559999

>KOG0289|consensus

Probab=99.95  E-value=7.2e-26  Score=175.31  Aligned_cols=224  Identities=18%  Similarity=0.267  Sum_probs=184.0

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPT  119 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  119 (312)
                      ..++++...|.      ...+++|+.|..+.++|...++.        ..+....++++...+++++.|..|++|.....
T Consensus       220 pgi~ald~~~s------~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~  293 (506)
T KOG0289|consen  220 PGITALDIIPS------SSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS  293 (506)
T ss_pred             CCeeEEeecCC------CCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence            34677766665      57899999999999999987765        35566667888889999999999999988764


Q ss_pred             cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc--cCCceeEEEECCCCCEEEEEe
Q psy15191        120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC--HQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ...       .....|..+|+.+..+|.|.+|++++.|+...+ |.++.........  ..-.+++.+|+|||..|.+|.
T Consensus       294 s~~-------~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt  366 (506)
T KOG0289|consen  294 SEP-------TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGT  366 (506)
T ss_pred             cCc-------cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccC
Confidence            321       122468899999999999999999999999999 8888877766552  234589999999999999999


Q ss_pred             cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191        197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL  276 (312)
Q Consensus       197 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  276 (312)
                      .|+.+++||+.+......+.+       |.++|..++|+.+|-+||++++|+.|++||++....            ..++
T Consensus       367 ~d~~vkiwdlks~~~~a~Fpg-------ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n------------~kt~  427 (506)
T KOG0289|consen  367 PDGVVKIWDLKSQTNVAKFPG-------HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN------------FKTI  427 (506)
T ss_pred             CCceEEEEEcCCccccccCCC-------CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc------------ccee
Confidence            999999999998887776666       999999999999999999999999999999987642            2233


Q ss_pred             ec-cCcceeEEEeccCCCeEEEEecCCC
Q psy15191        277 YG-HGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       277 ~~-~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .- ....|.++.|.+.|.+|+.++.|-+
T Consensus       428 ~l~~~~~v~s~~fD~SGt~L~~~g~~l~  455 (506)
T KOG0289|consen  428 QLDEKKEVNSLSFDQSGTYLGIAGSDLQ  455 (506)
T ss_pred             eccccccceeEEEcCCCCeEEeecceeE
Confidence            22 2237999999999999999955433

>KOG0299|consensus

Probab=99.95  E-value=4.1e-26  Score=177.75  Aligned_cols=243  Identities=19%  Similarity=0.204  Sum_probs=189.9

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------------------------ccccc
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------------------------LPYHM   93 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------------------------~~~~~   93 (312)
                      ...+..|.-+|.+++++|+      .++.++++.|++|.-|++.++...                          .+...
T Consensus       135 ~~~~~~H~~s~~~vals~d------~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~  208 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPD------DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTL  208 (479)
T ss_pred             ceeeccccCcceEEEeecc------ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEE
Confidence            6778889999999999999      899999999999999998877631                          12334


Q ss_pred             cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee
Q psy15191         94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT  172 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~  172 (312)
                      ..++++.+|++|+.|..|.||+.++.+..       ..+.+|...|.+++|-.....+++++.|+.+++ ++.....+.+
T Consensus       209 avS~Dgkylatgg~d~~v~Iw~~~t~ehv-------~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vet  281 (479)
T KOG0299|consen  209 AVSSDGKYLATGGRDRHVQIWDCDTLEHV-------KVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVET  281 (479)
T ss_pred             EEcCCCcEEEecCCCceEEEecCcccchh-------hcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHH
Confidence            44789999999999999999999985432       235699999999999998899999999999999 5555556667


Q ss_pred             ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191        173 LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV  252 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  252 (312)
                      +.+|.+.|.+|.-...++.+-+|+.|+++++|++....++. +.+       +.+.+-+++|- +...+++|+.+|.|.+
T Consensus       282 lyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqli-frg-------~~~sidcv~~I-n~~HfvsGSdnG~IaL  352 (479)
T KOG0299|consen  282 LYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLI-FRG-------GEGSIDCVAFI-NDEHFVSGSDNGSIAL  352 (479)
T ss_pred             HhCCccceeeechhcccceEEeccccceeEEEeccccceee-eeC-------CCCCeeeEEEe-cccceeeccCCceEEE
Confidence            77999999999988888888788899999999996544443 232       66778899997 4567999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEe---eccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKL---YGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++....+.....   .-..+...   ..+..+|++++..|..+++|+||     -+|+|++|
T Consensus       353 Ws~~KKkplf~~~---~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS-----~~G~vrLW  407 (479)
T KOG0299|consen  353 WSLLKKKPLFTSR---LAHGVIPELDPVNGNFWITSLAVIPGSDLLASGS-----WSGCVRLW  407 (479)
T ss_pred             eeecccCceeEee---ccccccCCccccccccceeeeEecccCceEEecC-----CCCceEEE
Confidence            9997764321100   00000000   12234899999999999999994     55559999

>KOG1332|consensus

Probab=99.95  E-value=1.6e-25  Score=161.12  Aligned_cols=231  Identities=22%  Similarity=0.329  Sum_probs=171.5

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCC-ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGG-KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----   88 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----   88 (312)
                      |+.+.+... ...|.-..-...+. +++.+|.||.++|+.++|..-    ..|.+||+++.||.|.||.-++++-.    
T Consensus        23 gkrlATcsS-D~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahP----k~G~iLAScsYDgkVIiWke~~g~w~k~~e   97 (299)
T KOG1332|consen   23 GKRLATCSS-DGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHP----KFGTILASCSYDGKVIIWKEENGRWTKAYE   97 (299)
T ss_pred             cceeeeecC-CccEEEEEEcCCCCceeeeEecCCCCCeeEEeeccc----ccCcEeeEeecCceEEEEecCCCchhhhhh
Confidence            566666653 22332222233333 789999999999999999773    34899999999999999998887541    


Q ss_pred             ------ccc--cccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC---C---------
Q psy15191         89 ------LPY--HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR---G---------  148 (312)
Q Consensus        89 ------~~~--~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~---------  148 (312)
                            .+.  ..+.+..+..|++++.||.|.+.+.+....-....    ....|...|++++|.|.   |         
T Consensus        98 ~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~k----i~~aH~~GvnsVswapa~~~g~~~~~~~~~  173 (299)
T KOG1332|consen   98 HAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSK----IVFAHEIGVNSVSWAPASAPGSLVDQGPAA  173 (299)
T ss_pred             hhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchh----hhhccccccceeeecCcCCCccccccCccc
Confidence                  122  22224556789999999999999988752211111    22468888999999985   4         


Q ss_pred             --CeEEEeecCCeEEE---ecccCceeeeecccCCceeEEEECCCC----CEEEEEecCCeEEEEEccCCCeEEEEeccC
Q psy15191        149 --DYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDD----THLVSVSRDRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       149 --~~l~~~~~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                        +.|++|+.|..|++   +..+|.+...+.+|.+.|+.++|.|.-    .+|+++++||++.||..+........+...
T Consensus       174 ~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~  253 (299)
T KOG1332|consen  174 KVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLE  253 (299)
T ss_pred             ccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccc
Confidence              56999999999999   555788888899999999999999953    479999999999999887332221111111


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      .    ....+..+.||+.|++|+.++.|+.|.+|.-..
T Consensus       254 ~----f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  254 E----FPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             c----CCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            1    556799999999999999999999999996443

>KOG0308|consensus

Probab=99.95  E-value=4.1e-26  Score=184.89  Aligned_cols=232  Identities=22%  Similarity=0.337  Sum_probs=186.9

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCC--C----ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEG--G----KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS   84 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~--~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~   84 (312)
                      ...++.+  +.+.++.+..+ |+...  +    ..+.+++.|.+.|+.+....+      ++.|+++|.|-+|++|+...
T Consensus        34 a~~~ryL--fTgGRDg~i~~-W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~------~~tlIS~SsDtTVK~W~~~~  104 (735)
T KOG0308|consen   34 APNGRYL--FTGGRDGIIRL-WSVTQDSNEPSTPYIASMEHHSDWVNDIILCGN------GKTLISASSDTTVKVWNAHK  104 (735)
T ss_pred             CCCCceE--EecCCCceEEE-eccccccCCcccchhhhhhhhHhHHhhHHhhcC------CCceEEecCCceEEEeeccc
Confidence            3445544  44444444444 65432  2    247788999999999998887      88999999999999999987


Q ss_pred             Cccc----------ccccccC-CCCCceEEEEeCCCcEEEEcCCCCcceeee---eeeecccC-CCccceeEEEECCCCC
Q psy15191         85 EGNY----------LPYHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLE---TARVGEVG-GNTLGFYGCKFGPRGD  149 (312)
Q Consensus        85 ~~~~----------~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~~-~~~~~v~~~~~~~~~~  149 (312)
                      +...          .+.+... .++..++++|+-|+.|.+||++++....+.   ........ ++..+|++++.++.|.
T Consensus       105 ~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t  184 (735)
T KOG0308|consen  105 DNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT  184 (735)
T ss_pred             CcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcce
Confidence            7421          2223333 566678999999999999999976332221   22233333 7888999999999999


Q ss_pred             eEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee
Q psy15191        150 YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       150 ~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  228 (312)
                      .+++|+.++.+++ |.++.+.+..+++|+..|..+..++||..+++++.||+|++||+...+.+..+..       |...
T Consensus       185 ~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~v-------H~e~  257 (735)
T KOG0308|consen  185 IIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIV-------HKEG  257 (735)
T ss_pred             EEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEe-------ccCc
Confidence            9999999999999 7777777788889999999999999999999999999999999999888888776       8888


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      |+++..+|+=..+++|+.||.|..=|+++.
T Consensus       258 VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~  287 (735)
T KOG0308|consen  258 VWALQSSPSFTHVYSGGRDGNIYRTDLRNP  287 (735)
T ss_pred             eEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence            999999999999999999999999999886

>KOG0301|consensus

Probab=99.95  E-value=4.3e-25  Score=180.20  Aligned_cols=249  Identities=20%  Similarity=0.303  Sum_probs=193.3

Q ss_pred             eEEEEeccCCCceEEEE------------------EeCCCCceE--EEEccccCcEEE-EEEecCcCcCCCCceEEEecC
Q psy15191         15 KVLYTLTNHKSKVMAVK------------------WNGEGGKVL--YTLTNHKSKVMA-VKWVLNTSLDPEHKDLVSCSL   73 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~------------------w~~~~~~~~--~~~~~h~~~v~~-~~~~~~~~~~~~~~~l~s~~~   73 (312)
                      ++-..+.+|+..|..++                  |....++.+  ..+.+|.+-|.. ++|.+.     ++-.+++|+.
T Consensus         5 ~ls~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~-----~~~~l~~g~~   79 (745)
T KOG0301|consen    5 KLSHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAES-----DKGRLVVGGM   79 (745)
T ss_pred             eeEEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccc-----cCcceEeecc
Confidence            44556677776665544                  555444433  346677777777 888754     2456999999


Q ss_pred             CCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         74 DKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        74 dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      |.+|.+|.......+        .+.......++ .+++|+.|.++++|-+....    .     ...+|..+|++++.-
T Consensus        80 D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~-~~iSgSWD~TakvW~~~~l~----~-----~l~gH~asVWAv~~l  149 (745)
T KOG0301|consen   80 DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDG-TLISGSWDSTAKVWRIGELV----Y-----SLQGHTASVWAVASL  149 (745)
T ss_pred             cceEEEEecCCCCchhhhhccccceeeeecCCcC-ceEecccccceEEecchhhh----c-----ccCCcchheeeeeec
Confidence            999999999887763        23333333344 48999999999999775421    1     245999999999999


Q ss_pred             CCCCeEEEeecCCeEEEecccCc---eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC
Q psy15191        146 PRGDYIIAHGFQGSLHLDVTTWK---QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN  222 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~  222 (312)
                      |++ .+++|+.|..|++    |+   ..+.+.+|++.|+.+++-+++ .|++++.||.|++|++ +++.+....+     
T Consensus       150 ~e~-~~vTgsaDKtIkl----Wk~~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~g-----  217 (745)
T KOG0301|consen  150 PEN-TYVTGSADKTIKL----WKGGTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHG-----  217 (745)
T ss_pred             CCC-cEEeccCcceeee----ccCCchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeec-----
Confidence            988 7999999999999    75   455677999999999998765 4889999999999999 4666666666     


Q ss_pred             cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                        |...|+++...+++..++++++|++++||+...              +.+.+.-....|+++.+-++|. |++|+.||
T Consensus       218 --htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e--------------~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG  280 (745)
T KOG0301|consen  218 --HTNFVYSISMALSDGLIVSTGEDRTLRIWKKDE--------------CVQVITLPTTSIWSAKVLLNGD-IVVGGSDG  280 (745)
T ss_pred             --cceEEEEEEecCCCCeEEEecCCceEEEeecCc--------------eEEEEecCccceEEEEEeeCCC-EEEeccCc
Confidence              899999999888999999999999999998762              6777776677899999999987 67785555


Q ss_pred             CcccceEEeC
Q psy15191        303 KPEHAAIIIW  312 (312)
Q Consensus       303 ~~~dg~i~iW  312 (312)
                      .     ||||
T Consensus       281 ~-----VrVf  285 (745)
T KOG0301|consen  281 R-----VRVF  285 (745)
T ss_pred             e-----EEEE
Confidence            5     9997

>KOG0283|consensus

Probab=99.95  E-value=6.8e-26  Score=188.75  Aligned_cols=201  Identities=19%  Similarity=0.278  Sum_probs=158.2

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc-------ccccCCC-CCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP-------YHMRDDS-KQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~-------~~~~~~~-~~~~l~~~~~d~  109 (312)
                      ++++.|.||.+.|..+.|+.+       .+|++++.|.+|+||++....++++       ++..++| +..+|++|+-|+
T Consensus       360 kP~~ef~GHt~DILDlSWSKn-------~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~  432 (712)
T KOG0283|consen  360 KPFCEFKGHTADILDLSWSKN-------NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDG  432 (712)
T ss_pred             cchhhhhccchhheecccccC-------CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeeccccc
Confidence            456678899999999999987       6999999999999999999888533       3333333 556999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec---------ccCCc
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP---------CHQLT  179 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~---------~~~~~  179 (312)
                      .|+||++...+-  ..-.      .-..-|++++|.|+|+..++|+.+|.+++ +....++.....         .|. .
T Consensus       433 KvRiWsI~d~~V--v~W~------Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-r  503 (712)
T KOG0283|consen  433 KVRLWSISDKKV--VDWN------DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-R  503 (712)
T ss_pred             ceEEeecCcCee--Eeeh------hhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-e
Confidence            999999987332  2111      22356999999999999999999999999 666666555433         233 8


Q ss_pred             eeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        180 ITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       180 v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      |+.+.|.| +...+++.+.|..|+|||.++...+..+++....     ..-....|+.||++|+++++|..|+||++...
T Consensus       504 ITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~-----~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  504 ITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNT-----SSQISASFSSDGKHIVSASEDSWVYIWKNDSF  578 (712)
T ss_pred             eeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccC-----CcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence            99999998 4445777789999999999888887777765432     22346789999999999999999999998544


Q ss_pred             C
Q psy15191        259 P  259 (312)
Q Consensus       259 ~  259 (312)
                      .
T Consensus       579 ~  579 (712)
T KOG0283|consen  579 N  579 (712)
T ss_pred             c
Confidence            3

>KOG0268|consensus

Probab=99.95  E-value=6e-27  Score=177.39  Aligned_cols=232  Identities=17%  Similarity=0.235  Sum_probs=177.4

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCC-ceEEEecCCCcEEEeeecCCcccccccccCC------CCCceEEEEeCCCcEE
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEH-KDLVSCSLDKTAILWKYVSEGNYLPYHMRDD------SKQLHLLSCSMDKSII  112 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~------~~~~~l~~~~~d~~i~  112 (312)
                      +..|.||.+.|.+++=+|.      . ..+|+|+.||.|++||+....+...+..+.+      -+...+++++.|.+|+
T Consensus        59 v~~L~gHrdGV~~lakhp~------~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK  132 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPN------KLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVK  132 (433)
T ss_pred             hhhccccccccchhhcCcc------hhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCccee
Confidence            5678999999999999987      3 5799999999999999988776433222221      1114789999999999


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC-
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT-  190 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~-  190 (312)
                      .|-++..   ...++      .....+..+.-+..+..+++++.  .|.| |..--.++..+.-....|.++.|+|-.. 
T Consensus       133 ~wk~~~~---p~~ti------lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETs  201 (433)
T KOG0268|consen  133 QWKIDGP---PLHTI------LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETS  201 (433)
T ss_pred             eeeccCC---cceee------eccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcch
Confidence            9988752   11111      12344666776677777888776  4667 2222233444555567899999999554 


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccc
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      .|++|+.|+.|.+||++...++..+.        ....-+.++|+|.+-.+++|++|..++.||++.-..          
T Consensus       202 ILas~~sDrsIvLyD~R~~~Pl~KVi--------~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~----------  263 (433)
T KOG0268|consen  202 ILASCASDRSIVLYDLRQASPLKKVI--------LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSR----------  263 (433)
T ss_pred             heeeeccCCceEEEecccCCccceee--------eeccccceecCccccceeeccccccceehhhhhhcc----------
Confidence            56677799999999999998887776        334456899999888899999999999999987643          


Q ss_pred             ceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        271 PEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       ++....+|.+.|.+++|||.|+-+++||.|.+     |+|+
T Consensus       264 -p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks-----IRIf  299 (433)
T KOG0268|consen  264 -PLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS-----IRIF  299 (433)
T ss_pred             -cchhhcccceeEEEeccCCCcchhccccccce-----EEEe
Confidence             67888899999999999999999999977776     9985

>KOG0274|consensus

Probab=99.94  E-value=5e-25  Score=184.76  Aligned_cols=229  Identities=24%  Similarity=0.312  Sum_probs=192.4

Q ss_pred             ceEeCCCCeEEEE-eccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          7 DVVNGEGGKVLYT-LTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         7 ~v~~~~~~~~~~~-~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      .+|+..+++.+.+ +.||.+.|.++.                   |+..+|++...+.+|.+.|.++...+.        
T Consensus       231 ~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~--------  302 (537)
T KOG0274|consen  231 HLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPF--------  302 (537)
T ss_pred             EEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCc--------
Confidence            4799999999999 999999999998                   888899999999999999999987655        


Q ss_pred             eEEEecCCCcEEEeeecCCcccccccccC------CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNYLPYHMRD------DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY  140 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~  140 (312)
                      ++++|+.|.+|++|++.++..+.+.-.+.      .-++.++++|+.|++|++||+.+  ..++....     +|...|+
T Consensus       303 ~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~--~~cl~sl~-----gH~~~V~  375 (537)
T KOG0274|consen  303 LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRT--GKCLKSLS-----GHTGRVY  375 (537)
T ss_pred             eEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhh--ceeeeeec-----CCcceEE
Confidence            88899999999999999888754333211      12356899999999999999996  55555554     8999999


Q ss_pred             EEEECCCCCeEEEeecCCeEEE-ecccC-ceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        141 GCKFGPRGDYIIAHGFQGSLHL-DVTTW-KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       141 ~~~~~~~~~~l~~~~~~~~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      ++.+.+. ..+++|+.|+.|++ |+++. +.+..+.+|...+..+.+  .+++|++++.|+.|++||..+.+....+...
T Consensus       376 sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~  452 (537)
T KOG0274|consen  376 SLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGR  452 (537)
T ss_pred             EEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEeecccCceeeeeccC
Confidence            9988776 88999999999999 77776 777778889888876665  5789999999999999999999999888864


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCC
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                            |...|..+++.  ...+++++.||.+++||++.+...
T Consensus       453 ------~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~  487 (537)
T KOG0274|consen  453 ------HVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLI  487 (537)
T ss_pred             ------CcccEEEeecC--cceEEEEecCCeeEEEecccCchh
Confidence                  44667777775  467889999999999999988643

>KOG0269|consensus

Probab=99.94  E-value=4.8e-26  Score=187.85  Aligned_cols=223  Identities=20%  Similarity=0.251  Sum_probs=170.2

Q ss_pred             EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC---cc-----------cccccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         50 VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE---GN-----------YLPYHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~---~~-----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      +..+.|..     -+.++|||++..|.|.+||+...   ..           ..+.+.+..|.  +|++|+.||+|++||
T Consensus        90 ~~DVkW~~-----~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~--iliSGSQDg~vK~~D  162 (839)
T KOG0269|consen   90 AADVKWGQ-----LYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPN--ILISGSQDGTVKCWD  162 (839)
T ss_pred             hhhccccc-----chhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCcc--EEEecCCCceEEEEe
Confidence            34456652     23578999999999999999872   21           13334444444  899999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCce-eeeecccCCceeEEEECCCCCEE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQ-IQTLPCHQLTITQLAFSPDDTHL  192 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l  192 (312)
                      ++..+...  +     +.+....|..++|+| .+..++++.+.|.+++ |++.++. ...+.+|.++|.++.|+|++.+|
T Consensus       163 lR~~~S~~--t-----~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~l  235 (839)
T KOG0269|consen  163 LRSKKSKS--T-----FRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWL  235 (839)
T ss_pred             eecccccc--c-----ccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCcee
Confidence            99754322  2     225677899999999 5778999999999999 5554432 23455999999999999999999


Q ss_pred             EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEec--cCCeEEEEecCCCCCCcccccccc
Q psy15191        193 VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTIS--RDGVCVVWGLGEPPTEEDLVQNTL  269 (312)
Q Consensus       193 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~  269 (312)
                      |||+.|+.|+|||+.+.+........      ...+|.+|.|-|..++ ||+++  .|..|+|||++.+-.         
T Consensus       236 ATGGRDK~vkiWd~t~~~~~~~~tIn------Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYI---------  300 (839)
T KOG0269|consen  236 ATGGRDKMVKIWDMTDSRAKPKHTIN------TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYI---------  300 (839)
T ss_pred             eecCCCccEEEEeccCCCccceeEEe------ecceeeeeeeccCccchhhhhhccccceEEEEeeccccc---------
Confidence            99999999999999876554443332      5678999999998765 56655  477999999988743         


Q ss_pred             cceeEEeeccCcceeEEEecc-CCCeEEEEecCCC
Q psy15191        270 WPEVQKLYGHGYEIYSLAASH-DGTLLASACKATK  303 (312)
Q Consensus       270 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s~d~~  303 (312)
                        +...+..|...++.++|.. |...|.+++.|+.
T Consensus       301 --P~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~t  333 (839)
T KOG0269|consen  301 --PYATFLEHTDSVTGIAWDSGDRINLWSCSKDGT  333 (839)
T ss_pred             --cceeeeccCccccceeccCCCceeeEeecCccH
Confidence              6677888999999999954 5678889976664

>KOG2055|consensus

Probab=99.94  E-value=3e-25  Score=173.11  Aligned_cols=232  Identities=15%  Similarity=0.160  Sum_probs=185.7

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCc-eEEEEeCCCcEEEEc
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQL-HLLSCSMDKSIIVWA  115 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~-~l~~~~~d~~i~i~d  115 (312)
                      .+.|+++.|+|.      ...|++|+.|++++||.++....          ..+....+.++|. .+++++....++.||
T Consensus       213 ~~~I~sv~FHp~------~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD  286 (514)
T KOG2055|consen  213 HGGITSVQFHPT------APLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD  286 (514)
T ss_pred             cCCceEEEecCC------CceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEee
Confidence            468999999999      88999999999999999876544          2444555677777 899999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      +.+.+...+....    ......+..+..+|++++|+..+..|.|.+ ...+.+.+..++ -.+.|..++|+.|++.|++
T Consensus       287 le~ak~~k~~~~~----g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~  361 (514)
T KOG2055|consen  287 LETAKVTKLKPPY----GVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLA  361 (514)
T ss_pred             ccccccccccCCC----CcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEE
Confidence            9886543322221    112346778899999999999999999999 888888888887 6788999999999999999


Q ss_pred             EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE
Q psy15191        195 VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ  274 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  274 (312)
                      ++.+|.|.+||++....+..+.....      -.-+.++.++++.|||+|+..|.|.|||..+......      -+++.
T Consensus       362 ~~~~GeV~v~nl~~~~~~~rf~D~G~------v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~------PkPik  429 (514)
T KOG2055|consen  362 SGGTGEVYVWNLRQNSCLHRFVDDGS------VHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTN------PKPIK  429 (514)
T ss_pred             EcCCceEEEEecCCcceEEEEeecCc------cceeeeeecCCCceEEeccCcceEEEeccchhhccCC------CCchh
Confidence            99999999999999887777764322      1234678889999999999999999999765432211      12566


Q ss_pred             EeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        275 KLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       275 ~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      .+..-...|+++.|+||+++||.+|.-
T Consensus       430 ~~dNLtt~Itsl~Fn~d~qiLAiaS~~  456 (514)
T KOG2055|consen  430 TVDNLTTAITSLQFNHDAQILAIASRV  456 (514)
T ss_pred             hhhhhheeeeeeeeCcchhhhhhhhhc
Confidence            666667789999999999999998763

>KOG2106|consensus

Probab=99.94  E-value=1.3e-23  Score=165.96  Aligned_cols=251  Identities=20%  Similarity=0.318  Sum_probs=189.5

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------------------
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------------------   87 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------------------   87 (312)
                      |++.+.+..+....|.+.|.+++...+      |. |++|+.|+.|..||-.-...                        
T Consensus       272 w~~~~~~~~k~~~aH~ggv~~L~~lr~------Gt-llSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~v  344 (626)
T KOG2106|consen  272 WSKGTNRISKQVHAHDGGVFSLCMLRD------GT-LLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILV  344 (626)
T ss_pred             EeCCCceEEeEeeecCCceEEEEEecC------cc-EeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEE
Confidence            888777877777799999999999988      75 55699999999998321111                        


Q ss_pred             ------------------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         88 ------------------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        88 ------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                                              -...-...++...++++++.|+.+++|+  ..+..+....        ..++.++.
T Consensus       345 GTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~--------~d~~~~~~  414 (626)
T KOG2106|consen  345 GTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKII--------EDPAECAD  414 (626)
T ss_pred             eeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEe--------cCceeEee
Confidence                                    0111222356667899999999999999  3223333222        35688999


Q ss_pred             ECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC
Q psy15191        144 FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN  222 (312)
Q Consensus       144 ~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~  222 (312)
                      |+|.| .++.|...|...+ |.++-+++..... +.+++.++|+|+|.+||.|+.|+.|++|.+.........-...   
T Consensus       415 fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~---  489 (626)
T KOG2106|consen  415 FHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKC---  489 (626)
T ss_pred             ccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeee---
Confidence            99999 9999999999888 9999888777665 8899999999999999999999999999998766554433322   


Q ss_pred             cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccc--------------------------------
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW--------------------------------  270 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------------------------  270 (312)
                        +..+|+.+.|++|+++|.+-+-|..|..|....- ..........|                                
T Consensus       490 --~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~-~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~l  566 (626)
T KOG2106|consen  490 --SGSPITHLDWSSDSQFLVSNSGDYEILYWKPSEC-KQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLL  566 (626)
T ss_pred             --cCceeEEeeecCCCceEEeccCceEEEEEccccC-cccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhh
Confidence              4588999999999999999999999999943222 21111111111                                


Q ss_pred             --------------------ceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        271 --------------------PEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 --------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                          .+..++.+|++.|++++|..+.++|++.+.     |.+|..|
T Consensus       567 A~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~-----D~Si~qW  623 (626)
T KOG2106|consen  567 ASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGK-----DTSIMQW  623 (626)
T ss_pred             hccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCC-----CceEEEE
Confidence                                134556678999999999998888988844     4459888

>KOG0301|consensus

Probab=99.94  E-value=4.1e-25  Score=180.30  Aligned_cols=227  Identities=25%  Similarity=0.364  Sum_probs=186.6

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc------------c-ccccCCCCCceEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL------------P-YHMRDDSKQLHLL  103 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~------------~-~~~~~~~~~~~l~  103 (312)
                      -++.+.+.+|...|..+++.+.       ..++++|+||++++|+-..++...            . .+.. ..++..++
T Consensus         4 Y~ls~~l~gH~~DVr~v~~~~~-------~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~-e~~~~~l~   75 (745)
T KOG0301|consen    4 YKLSHELEGHKSDVRAVAVTDG-------VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYA-ESDKGRLV   75 (745)
T ss_pred             ceeEEEeccCccchheeEecCC-------eEEeecCCCCceeeeeccCcccccceecccCcceeeccceec-cccCcceE
Confidence            4567889999999999987665       589999999999999986655421            1 1111 14445799


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCce---eeeecccCCce
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQ---IQTLPCHQLTI  180 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~---~~~~~~~~~~v  180 (312)
                      +|+.|.++.+|......       +...+.+|...|.++....++. +++|+.|.++++    |..   ...+++|+..|
T Consensus        76 ~g~~D~~i~v~~~~~~~-------P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~Takv----W~~~~l~~~l~gH~asV  143 (745)
T KOG0301|consen   76 VGGMDTTIIVFKLSQAE-------PLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKV----WRIGELVYSLQGHTASV  143 (745)
T ss_pred             eecccceEEEEecCCCC-------chhhhhccccceeeeecCCcCc-eEecccccceEE----ecchhhhcccCCcchhe
Confidence            99999999999988743       3344459999999999888887 999999999999    754   44577999999


Q ss_pred             eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        181 TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      ..++.-|++ .++||+.|.+|++|.-  ++.+..+.+       |...|.++++-|++ .+++++.||.|+.|++...  
T Consensus       144 WAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~g-------HtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~ge--  210 (745)
T KOG0301|consen  144 WAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSG-------HTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDGE--  210 (745)
T ss_pred             eeeeecCCC-cEEeccCcceeeeccC--Cchhhhhcc-------chhheeeeEEecCC-CeEeecCCceEEEEeccCc--
Confidence            999999987 7899999999999986  556666666       89999999998765 4789999999999999554  


Q ss_pred             CcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                 .+.+..+|..-|++++..+++..++++     +||++++||
T Consensus       211 -----------~l~~~~ghtn~vYsis~~~~~~~Ivs~-----gEDrtlriW  246 (745)
T KOG0301|consen  211 -----------VLLEMHGHTNFVYSISMALSDGLIVST-----GEDRTLRIW  246 (745)
T ss_pred             -----------eeeeeeccceEEEEEEecCCCCeEEEe-----cCCceEEEe
Confidence                       789999999999999988888899999     666669999

>KOG1036|consensus

Probab=99.94  E-value=4.6e-24  Score=158.57  Aligned_cols=227  Identities=18%  Similarity=0.189  Sum_probs=173.7

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      .|..++.+++|.++       ..+++|+.||.|+.+|+.++...       .+.++...+....+++|+.|++|++||.+
T Consensus        52 ~~~~plL~c~F~d~-------~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R  124 (323)
T KOG1036|consen   52 KHGAPLLDCAFADE-------STIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR  124 (323)
T ss_pred             ecCCceeeeeccCC-------ceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence            38899999999876       67999999999999999987752       33444444555689999999999999998


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~  194 (312)
                      ....  ....      .....|.++..  .++.|++|+.+..+.+ |+++.+......  ..+-.++++++-|++.-+++
T Consensus       125 ~~~~--~~~~------d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~  194 (323)
T KOG1036|consen  125 NKVV--VGTF------DQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVV  194 (323)
T ss_pred             cccc--cccc------ccCceEEEEec--cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEE
Confidence            6221  1111      12336776665  5788999999999999 776665443222  34567899999998888999


Q ss_pred             EecCCeEEEEEccCC----CeEEEEeccCCCCcc--cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        195 VSRDRRWGLYKRQSS----GRLSLVACSDKTNGV--HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~----~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      ++-||.|.+=.+...    .....++++......  .-.+|++++|+|-...||||+.||.|.+||+...+         
T Consensus       195 sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rK---------  265 (323)
T KOG1036|consen  195 SSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRK---------  265 (323)
T ss_pred             EeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchh---------
Confidence            999999888766654    444555554433222  45689999999999999999999999999998764         


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                         .+..+......|.+++|+.+|..||.|+.
T Consensus       266 ---rl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  266 ---RLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             ---hhhhccCCCCceEEEEeccCCCeEEEEec
Confidence               46666666778999999999999999975

>KOG0647|consensus

Probab=99.94  E-value=3.5e-24  Score=158.76  Aligned_cols=230  Identities=16%  Similarity=0.200  Sum_probs=175.6

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEE
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVW  114 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~  114 (312)
                      ...+.|.+|+|+|.    . ..+++.+|.|++||+|+++....          -.+....++.++..+++++.|+.+++|
T Consensus        25 pP~DsIS~l~FSP~----~-~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~w   99 (347)
T KOG0647|consen   25 PPEDSISALAFSPQ----A-DNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLW   99 (347)
T ss_pred             CcccchheeEeccc----c-CceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEE
Confidence            35678999999995    2 45777999999999999987422          245556677888899999999999999


Q ss_pred             cCCCCcceeeeeeeecccCCCccceeEEEECCCCC--eEEEeecCCeEEE-ecccCceeeeec-----------------
Q psy15191        115 APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD--YIIAHGFQGSLHL-DVTTWKQIQTLP-----------------  174 (312)
Q Consensus       115 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~~i~~-d~~~~~~~~~~~-----------------  174 (312)
                      |+.+++..        .+..|..+|..+.|-+...  .|++|+.|.++++ |++.-..+..+.                 
T Consensus       100 DL~S~Q~~--------~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vV  171 (347)
T KOG0647|consen  100 DLASGQVS--------QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVV  171 (347)
T ss_pred             EccCCCee--------eeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEE
Confidence            99985322        2246899999999987655  7999999999999 555444333322                 


Q ss_pred             ------------------------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC--CeEEEEeccCCCCcc--cc
Q psy15191        175 ------------------------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS--GRLSLVACSDKTNGV--HK  226 (312)
Q Consensus       175 ------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~--~~  226 (312)
                                              ..+-.+++++..+|....+.|+-.|.+-+..+...  +....++++......  .-
T Consensus       172 ata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~V  251 (347)
T KOG0647|consen  172 ATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDV  251 (347)
T ss_pred             EecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCce
Confidence                                    11234677888787777788888888888887765  444555554432211  24


Q ss_pred             eeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        227 RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       227 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ..|++++|+|.-..|++++.||.+.+||-....            .+...+.|..+|++.+|+.+|.++|.+.
T Consensus       252 YaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~------------kLk~s~~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  252 YAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART------------KLKTSETHPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             EEecceEeecccceEEEecCCceEEEecchhhh------------hhhccCcCCCccceeEecCCCCEEEEEe
Confidence            578999999999999999999999999976553            4666677999999999999999998764

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.94  E-value=3.3e-23  Score=166.74  Aligned_cols=249  Identities=12%  Similarity=0.057  Sum_probs=171.4

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCcccc-------cccccCCCCCceE
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHL  102 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l  102 (312)
                      .|+..+++.+..+..+. .+.+++|+|+      ++.+ ++++.++.|++||..+++...       .....+++++..+
T Consensus        15 ~~d~~t~~~~~~~~~~~-~~~~l~~~~d------g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l   87 (300)
T TIGR03866        15 VIDTATLEVTRTFPVGQ-RPRGITLSKD------GKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKIL   87 (300)
T ss_pred             EEECCCCceEEEEECCC-CCCceEECCC------CCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEE
Confidence            38998899989888664 4678999998      7765 677889999999998766421       2223345666666


Q ss_pred             EE-EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe-EEE-ecccCceeeeecccCCc
Q psy15191        103 LS-CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-LHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       103 ~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      ++ ++.++.+++||+.+.+  .+....      ....+.+++|+|++++++++..++. +.+ |..+.+...... ....
T Consensus        88 ~~~~~~~~~l~~~d~~~~~--~~~~~~------~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~  158 (300)
T TIGR03866        88 YIANEDDNLVTVIDIETRK--VLAEIP------VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL-VDQR  158 (300)
T ss_pred             EEEcCCCCeEEEEECCCCe--EEeEee------CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE-cCCC
Confidence            54 4568999999998743  222221      1233578999999999998887654 444 777666554443 2345


Q ss_pred             eeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE-eccCCeEEEEecCC
Q psy15191        180 ITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT-ISRDGVCVVWGLGE  257 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~  257 (312)
                      ...++|+|++++|+++ ..++.|++||+++.+....+................++|+|++++++. .+.++.|.+||+.+
T Consensus       159 ~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~  238 (300)
T TIGR03866       159 PRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT  238 (300)
T ss_pred             ccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC
Confidence            6789999999988654 468999999999877665554221100001112346889999998554 45567899999876


Q ss_pred             CCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        258 PPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..            ....+ .+...+.+++|+|+|++|++++    +.+|.|++|
T Consensus       239 ~~------------~~~~~-~~~~~~~~~~~~~~g~~l~~~~----~~~~~i~v~  276 (300)
T TIGR03866       239 YE------------VLDYL-LVGQRVWQLAFTPDEKYLLTTN----GVSNDVSVI  276 (300)
T ss_pred             Cc------------EEEEE-EeCCCcceEEECCCCCEEEEEc----CCCCeEEEE
Confidence            52            22222 3455789999999999998874    345559988

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0639|consensus

Probab=99.93  E-value=1.8e-24  Score=170.82  Aligned_cols=219  Identities=14%  Similarity=0.242  Sum_probs=181.6

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAP  116 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  116 (312)
                      .+-|.++...|+      |+.|++|+.-.++.|||+.....          .....+..+++....+++..||.|.|||+
T Consensus       465 dnyiRSckL~pd------grtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDL  538 (705)
T KOG0639|consen  465 DNYIRSCKLLPD------GRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDL  538 (705)
T ss_pred             ccceeeeEecCC------CceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEc
Confidence            355777777777      99999999999999999977554          23344556888889999999999999999


Q ss_pred             CCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----ccCCceeEEEECCCCCEE
Q psy15191        117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----CHQLTITQLAFSPDDTHL  192 (312)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l  192 (312)
                      ...  .     .+..+.+|...+.|+..+++|..|.+|+-|.+++-    |+++...+    .....|.++.++|++.++
T Consensus       539 hnq--~-----~VrqfqGhtDGascIdis~dGtklWTGGlDntvRc----WDlregrqlqqhdF~SQIfSLg~cP~~dWl  607 (705)
T KOG0639|consen  539 HNQ--T-----LVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRC----WDLREGRQLQQHDFSSQIFSLGYCPTGDWL  607 (705)
T ss_pred             ccc--e-----eeecccCCCCCceeEEecCCCceeecCCCccceee----hhhhhhhhhhhhhhhhhheecccCCCccce
Confidence            972  2     33445699999999999999999999999999999    77655433    246789999999999999


Q ss_pred             EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccce
Q psy15191        193 VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPE  272 (312)
Q Consensus       193 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  272 (312)
                      +.|-+++.+.+-.....+..+.-.        |+.-|.++.|.+.|+++++.+.|+-+..|....+..            
T Consensus       608 avGMens~vevlh~skp~kyqlhl--------heScVLSlKFa~cGkwfvStGkDnlLnawrtPyGas------------  667 (705)
T KOG0639|consen  608 AVGMENSNVEVLHTSKPEKYQLHL--------HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS------------  667 (705)
T ss_pred             eeecccCcEEEEecCCccceeecc--------cccEEEEEEecccCceeeecCchhhhhhccCccccc------------
Confidence            999999999988887665554433        889999999999999999999999999999888753            


Q ss_pred             eEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        273 VQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       273 ~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      +.... ..++|.++..|.|.++|+|||.|.+
T Consensus       668 iFqsk-E~SsVlsCDIS~ddkyIVTGSGdkk  697 (705)
T KOG0639|consen  668 IFQSK-ESSSVLSCDISFDDKYIVTGSGDKK  697 (705)
T ss_pred             eeecc-ccCcceeeeeccCceEEEecCCCcc
Confidence            33222 4678999999999999999987765

>KOG2106|consensus

Probab=99.93  E-value=3.2e-23  Score=163.74  Aligned_cols=273  Identities=14%  Similarity=0.208  Sum_probs=193.9

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC-Cc----------------------eEEEEccccCcEEEEEEecCcCcCC
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-GK----------------------VLYTLTNHKSKVMAVKWVLNTSLDP   63 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-~~----------------------~~~~~~~h~~~v~~~~~~~~~~~~~   63 (312)
                      ++|+..+-..++.+......|.|++|+... |.                      .....+.-+..|....|+|.     
T Consensus       137 riWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPt-----  211 (626)
T KOG2106|consen  137 RIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPT-----  211 (626)
T ss_pred             eecccccceeeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccC-----
Confidence            679988888888888878888999876543 22                      22233334556788899998     


Q ss_pred             CCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecc
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGE  131 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  131 (312)
                      +.+++++++ .+.+..|+.+.+..            ..+.++.+.+++ -+++|..+|.|.||+..+.+  ....    .
T Consensus       212 d~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~eng-dviTgDS~G~i~Iw~~~~~~--~~k~----~  283 (626)
T KOG2106|consen  212 DPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENG-DVITGDSGGNILIWSKGTNR--ISKQ----V  283 (626)
T ss_pred             CCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEEEEEEcCCC-CEEeecCCceEEEEeCCCce--EEeE----e
Confidence            345666666 57899999877654            234445555555 58999999999999987632  2222    2


Q ss_pred             cCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee--------------------------------------
Q psy15191        132 VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT--------------------------------------  172 (312)
Q Consensus       132 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~--------------------------------------  172 (312)
                      . .|.+.|.+++.-.+|.+|- |+.|..|.. | ...+.++.                                      
T Consensus       284 ~-aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f  360 (626)
T KOG2106|consen  284 H-AHDGGVFSLCMLRDGTLLS-GGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGF  360 (626)
T ss_pred             e-ecCCceEEEEEecCccEee-cCccceEEecc-ccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCc
Confidence            2 7899999999999998665 999999888 2 11110000                                      


Q ss_pred             ---ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe-----------------------------ccCC
Q psy15191        173 ---LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA-----------------------------CSDK  220 (312)
Q Consensus       173 ---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----------------------------~~~~  220 (312)
                         .++|......++.+|+.+.++|++.|+.+++|+-..  ......                             ....
T Consensus       361 ~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k--~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~  438 (626)
T KOG2106|consen  361 TLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHK--LEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQ  438 (626)
T ss_pred             eEEEEecccceeeEEcCCChhheeeccCcceEEEccCCc--eeEEEEecCceeEeeccCcceEEEeeccceEEEEecccc
Confidence               016777888999999999999999999999999222  111100                             0000


Q ss_pred             C---CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191        221 T---NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       221 ~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  297 (312)
                      .   ......+++.++|+|+|.+||.|+.|+.|+||.+.....        .+..+....+  ++|+.+.||+|+++|.+
T Consensus       439 ~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~--------~y~r~~k~~g--s~ithLDwS~Ds~~~~~  508 (626)
T KOG2106|consen  439 DLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGR--------KYSRVGKCSG--SPITHLDWSSDSQFLVS  508 (626)
T ss_pred             eeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCc--------EEEEeeeecC--ceeEEeeecCCCceEEe
Confidence            0   000356899999999999999999999999999987743        2224444444  89999999999999999


Q ss_pred             EecCCCcccceEEeC
Q psy15191        298 ACKATKPEHAAIIIW  312 (312)
Q Consensus       298 ~s~d~~~~dg~i~iW  312 (312)
                      -|.|-.     |..|
T Consensus       509 ~S~d~e-----iLyW  518 (626)
T KOG2106|consen  509 NSGDYE-----ILYW  518 (626)
T ss_pred             ccCceE-----EEEE
Confidence            966655     8777

>KOG0305|consensus

Probab=99.93  E-value=1.2e-23  Score=170.77  Aligned_cols=229  Identities=18%  Similarity=0.204  Sum_probs=186.0

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEcc-ccCcEEEEEEecCcCcCCCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTN-HKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      .+|+..+++.......+...|+++.|++++                   .+.++.+.+ |...|-+++|...        
T Consensus       200 ylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~--------  271 (484)
T KOG0305|consen  200 YLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSS--------  271 (484)
T ss_pred             EEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCc--------
Confidence            478888888766666668889999977665                   345667777 9999999999754        


Q ss_pred             eEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      .+.+|+.|+.|..+|++..+..         .+.-..+.+++.++++|+.|+.+.|||....+       +...+..|..
T Consensus       272 ~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~-------p~~~~~~H~a  344 (484)
T KOG0305|consen  272 VLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE-------PKFTFTEHTA  344 (484)
T ss_pred             eEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc-------ccEEEeccce
Confidence            8999999999999999876542         33445567888999999999999999995532       2223347999


Q ss_pred             ceeEEEECC-CCCeEEEee--cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE--ecCCeEEEEEccCCCe
Q psy15191        138 GFYGCKFGP-RGDYIIAHG--FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV--SRDRRWGLYKRQSSGR  211 (312)
Q Consensus       138 ~v~~~~~~~-~~~~l~~~~--~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~wd~~~~~~  211 (312)
                      .|.+++|+| ....||+|+  .|+.|++ |..+...+.... ....|.+|.|++..+.|+++  ..++.|.||+..+.+.
T Consensus       345 AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~  423 (484)
T KOG0305|consen  345 AVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKL  423 (484)
T ss_pred             eeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccce
Confidence            999999999 566777764  6899999 666666655554 56789999999998877774  4567899999999888


Q ss_pred             EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ...+.+       |...|..++++|||..+++|+.|.++++|++-..
T Consensus       424 ~~~l~g-------H~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  424 VAELLG-------HTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             eeeecC-------CcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            887777       9999999999999999999999999999998764

>KOG0294|consensus

Probab=99.93  E-value=2.6e-23  Score=155.03  Aligned_cols=224  Identities=18%  Similarity=0.221  Sum_probs=173.4

Q ss_pred             eEEEEeccCCCceEEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcE
Q psy15191         15 KVLYTLTNHKSKVMAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTA   77 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i   77 (312)
                      .+++.+..|.++|++++                 ||......+..+..|.+.|+++.|.+.    .....|++|+.||.|
T Consensus        34 ~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~----~S~shLlS~sdDG~i  109 (362)
T KOG0294|consen   34 KPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPP----LSKSHLLSGSDDGHI  109 (362)
T ss_pred             eccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCC----cchhheeeecCCCcE
Confidence            45788899999999998                 566666677778889999999999998    112389999999999


Q ss_pred             EEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191         78 ILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        78 ~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                      .+|+...-..        ..+.....+|.+.+.++.+.|+.++.||+-+++......+.        .....+.|+|.|.
T Consensus       110 ~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~--------~~at~v~w~~~Gd  181 (362)
T KOG0294|consen  110 IIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK--------NKATLVSWSPQGD  181 (362)
T ss_pred             EEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC--------CcceeeEEcCCCC
Confidence            9999866443        24666777899999999999999999999886654443332        1234489999999


Q ss_pred             eEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191        150 YIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII  229 (312)
Q Consensus       150 ~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v  229 (312)
                      +++.+..++.-...+.+-.+...+. ....+.++.|. ++..|++|..|+.|.+||.....+...+..       |...|
T Consensus       182 ~F~v~~~~~i~i~q~d~A~v~~~i~-~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~A-------H~~RV  252 (362)
T KOG0294|consen  182 HFVVSGRNKIDIYQLDNASVFREIE-NPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLA-------HENRV  252 (362)
T ss_pred             EEEEEeccEEEEEecccHhHhhhhh-ccccceeeeec-CCceEEEecCCceEEEeccCCCccceeeec-------chhhe
Confidence            9998887765444333333333333 23557777775 677899999999999999998777777766       88889


Q ss_pred             EEEEE--cCCCceEEEeccCCeEEEEecCCCC
Q psy15191        230 WGVAW--SHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       230 ~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .++.+  .|++.||++++.||.|+|||++...
T Consensus       253 K~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~  284 (362)
T KOG0294|consen  253 KDIASYTNPEHEYLVTASSDGFIKVWDIDMET  284 (362)
T ss_pred             eeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence            99884  5788999999999999999998764

>KOG0772|consensus

Probab=99.93  E-value=1.2e-24  Score=172.06  Aligned_cols=206  Identities=17%  Similarity=0.244  Sum_probs=150.8

Q ss_pred             ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC
Q psy15191         89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW  167 (312)
Q Consensus        89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~  167 (312)
                      .+..+...+.|..|++|+.|-.|++||+......... ++ ...+.....|.++.|++.|..|++.+.....++ |..-.
T Consensus       169 ~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~-fr-~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~  246 (641)
T KOG0772|consen  169 IVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS-FR-QLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGF  246 (641)
T ss_pred             EEEEeeecCCCceeeeccccceEEEEecccccccchh-hh-ccCcccccccceeeecCCCCeEEEEecCcceeEEccCCc
Confidence            3445556788999999999999999999853322211 11 111244567899999999999988888777777 54433


Q ss_pred             ceeeee------------cccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEE
Q psy15191        168 KQIQTL------------PCHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVA  233 (312)
Q Consensus       168 ~~~~~~------------~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~  233 (312)
                      ......            ++|...+++.+|+|+ ...|+|++.||++++||+...+ +.+.+......  ...-+++.++
T Consensus       247 ~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~--g~Rv~~tsC~  324 (641)
T KOG0772|consen  247 EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG--GKRVPVTSCA  324 (641)
T ss_pred             eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCC--CcccCceeee
Confidence            333222            289999999999995 4578999999999999998644 34444332211  2455788999


Q ss_pred             EcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCc--ceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        234 WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY--EIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       234 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      |+|+|+++|+|+.||.|.+|+........         ....-.+|..  .|++++||+||++|++-|.|     +++++
T Consensus       325 ~nrdg~~iAagc~DGSIQ~W~~~~~~v~p---------~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D-----~tLKv  390 (641)
T KOG0772|consen  325 WNRDGKLIAAGCLDGSIQIWDKGSRTVRP---------VMKVKDAHLPGQDITSISFSYDGNYLLSRGFD-----DTLKV  390 (641)
T ss_pred             cCCCcchhhhcccCCceeeeecCCccccc---------ceEeeeccCCCCceeEEEeccccchhhhccCC-----Cceee
Confidence            99999999999999999999985543221         2333446766  89999999999999999554     45999


Q ss_pred             C
Q psy15191        312 W  312 (312)
Q Consensus       312 W  312 (312)
                      |
T Consensus       391 W  391 (641)
T KOG0772|consen  391 W  391 (641)
T ss_pred             e
Confidence            9

>KOG0300|consensus

Probab=99.92  E-value=1.8e-23  Score=156.40  Aligned_cols=233  Identities=19%  Similarity=0.314  Sum_probs=186.0

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------------------------------------
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------------------------------------   36 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------------------------------------   36 (312)
                      ..||..++|+++.++.||.+.|+++.|.+..                                                 
T Consensus       172 A~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d  251 (481)
T KOG0300|consen  172 ARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTD  251 (481)
T ss_pred             eeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccc
Confidence            4799999999999999999999999965533                                                 


Q ss_pred             ----------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------ccccCCCC
Q psy15191         37 ----------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------YHMRDDSK   98 (312)
Q Consensus        37 ----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------~~~~~~~~   98 (312)
                                ..++..|.+|...|.++.|...      |+.+++++.|.+..+||+++++.+.+        ..+..+|.
T Consensus       252 ~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g------g~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHpt  325 (481)
T KOG0300|consen  252 SSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG------GQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPT  325 (481)
T ss_pred             cccccCCceeeeeeeeeeccccceEehhhhcC------cceeeeeeccccceeeeeccCceeccccCcchhccccccCCc
Confidence                      2356788999999999999998      89999999999999999999987533        34445778


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----  174 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----  174 (312)
                      ..++++.+.|.+.++||++..      ...+..+.+|...|++..|..+.+ +++|+.|..|++    |++.....    
T Consensus       326 QrLVvTsSrDtTFRLWDFRea------I~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKv----WdLrNMRsplAT  394 (481)
T KOG0300|consen  326 QRLVVTSSRDTTFRLWDFREA------IQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKV----WDLRNMRSPLAT  394 (481)
T ss_pred             ceEEEEeccCceeEeccchhh------cceeeeecccccceeEEEEecCCc-eeecCCCceEEE----eeeccccCccee
Confidence            889999999999999999841      223344569999999999987654 889999999999    55543221    


Q ss_pred             -ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc--eEEEeccCCeEE
Q psy15191        175 -CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR--YFLTISRDGVCV  251 (312)
Q Consensus       175 -~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~  251 (312)
                       ....+++.++.+..+..++.-..+..|++||+....... ++.  .....|...|++++|..+..  -|++++.|..+.
T Consensus       395 IRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaR-lPr--tsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~  471 (481)
T KOG0300|consen  395 IRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLAR-LPR--TSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVA  471 (481)
T ss_pred             eecCCccceeEeecCCceEEeccCCceEEEEecCCCcccc-CCc--ccccccceeeeeeeccccCcccccccccccceee
Confidence             356788999999888888888888999999998544332 221  11122889999999986543  588999999999


Q ss_pred             EEecCCC
Q psy15191        252 VWGLGEP  258 (312)
Q Consensus       252 iwd~~~~  258 (312)
                      -|.+..+
T Consensus       472 gW~in~p  478 (481)
T KOG0300|consen  472 GWKINTP  478 (481)
T ss_pred             eeEeccc
Confidence            9998765

>KOG1036|consensus

Probab=99.92  E-value=5.9e-23  Score=152.73  Aligned_cols=227  Identities=14%  Similarity=0.154  Sum_probs=170.8

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPT  119 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  119 (312)
                      ...|.++.|+|.      +..|+.++.||++++|+......       ..+..+.+.+ ...+++|+.||.|+.+|+.++
T Consensus        13 ~d~IS~v~f~~~------~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~   85 (323)
T KOG1036|consen   13 EDGISSVKFSPS------SSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG   85 (323)
T ss_pred             hhceeeEEEcCc------CCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCC
Confidence            578999999988      77888889999999999987654       1233333333 447999999999999999986


Q ss_pred             cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----ccCCceeEEEECCCCCEEEEE
Q psy15191        120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----CHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~  195 (312)
                      +...        +..|..++.++.+++....+++|+.|+.|++    |+......    .....|.++...  ++.|+.|
T Consensus        86 ~~~~--------igth~~~i~ci~~~~~~~~vIsgsWD~~ik~----wD~R~~~~~~~~d~~kkVy~~~v~--g~~LvVg  151 (323)
T KOG1036|consen   86 NEDQ--------IGTHDEGIRCIEYSYEVGCVISGSWDKTIKF----WDPRNKVVVGTFDQGKKVYCMDVS--GNRLVVG  151 (323)
T ss_pred             ccee--------eccCCCceEEEEeeccCCeEEEcccCccEEE----EeccccccccccccCceEEEEecc--CCEEEEe
Confidence            5332        2368899999999999999999999999999    66553221    244578888764  7789999


Q ss_pred             ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        196 SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       196 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      +.|..+.+||+++..........     ..+..+.++++-|++.-+++++-||.|.+=.+.......    .    .-..
T Consensus       152 ~~~r~v~iyDLRn~~~~~q~reS-----~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~----s----kkya  218 (323)
T KOG1036|consen  152 TSDRKVLIYDLRNLDEPFQRRES-----SLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQ----S----KKYA  218 (323)
T ss_pred             ecCceEEEEEcccccchhhhccc-----cceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHh----h----hcee
Confidence            99999999999987655422221     156778999999998889999999998876555441110    0    2233


Q ss_pred             eeccC---------cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        276 LYGHG---------YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       276 ~~~~~---------~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.-|.         -+|++++|+|--..||||+.||.     |.+|
T Consensus       219 FkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~-----V~~W  259 (323)
T KOG1036|consen  219 FKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGI-----VNIW  259 (323)
T ss_pred             EEeeecccCCceEEEEeceeEeccccceEEecCCCce-----EEEc
Confidence            33332         37999999999999999955554     9999

>KOG0264|consensus

Probab=99.92  E-value=3.4e-23  Score=161.37  Aligned_cols=205  Identities=19%  Similarity=0.306  Sum_probs=153.5

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------------cccccccCCCCCceE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------------YLPYHMRDDSKQLHL  102 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------------~~~~~~~~~~~~~~l  102 (312)
                      .+|.+|.++=++++|++.    . .-.|++++.|++|++||+.....                  ..+.+.+.+.  .+|
T Consensus       171 l~L~gH~~eg~glsWn~~----~-~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~--~lF  243 (422)
T KOG0264|consen  171 LRLKGHEKEGYGLSWNRQ----Q-EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHE--DLF  243 (422)
T ss_pred             eEEEeecccccccccccc----c-ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccch--hhh
Confidence            378899998889999987    3 34799999999999999976543                  1223333333  379


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCc-eeeeecccCCc
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWK-QIQTLPCHQLT  179 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~~~~  179 (312)
                      .+++.|+.+.|||+++.+..     .......|...+.|++|+| ++..||+|+.|++|.+ |+++.+ ....+.+|...
T Consensus       244 ~sv~dd~~L~iwD~R~~~~~-----~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~de  318 (422)
T KOG0264|consen  244 GSVGDDGKLMIWDTRSNTSK-----PSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDE  318 (422)
T ss_pred             eeecCCCeEEEEEcCCCCCC-----CcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcc
Confidence            99999999999999963221     2223358999999999999 5666888999999999 666543 34456799999


Q ss_pred             eeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEE----eccCCC---CcccceeeEEEEEcCCCce-EEEeccCCeE
Q psy15191        180 ITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLV----ACSDKT---NGVHKRIIWGVAWSHDSRY-FLTISRDGVC  250 (312)
Q Consensus       180 v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~---~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i  250 (312)
                      |.++.|+|+ ...|++++.|+.+.+||+..-...+..    .++...   ...|...|..+.|+|+..+ +++.++|+.+
T Consensus       319 v~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~L  398 (422)
T KOG0264|consen  319 VFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNIL  398 (422)
T ss_pred             eEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceE
Confidence            999999994 567889999999999999864333210    011110   0118889999999998765 6688899999


Q ss_pred             EEEecCC
Q psy15191        251 VVWGLGE  257 (312)
Q Consensus       251 ~iwd~~~  257 (312)
                      .||....
T Consensus       399 qIW~~s~  405 (422)
T KOG0264|consen  399 QIWQMAE  405 (422)
T ss_pred             EEeeccc
Confidence            9998764

>KOG0302|consensus

Probab=99.92  E-value=6.7e-24  Score=161.76  Aligned_cols=220  Identities=19%  Similarity=0.254  Sum_probs=154.4

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceee
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWL  124 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  124 (312)
                      .|.+.++.+.-++-    ++..+.++-+..|.|+||++...-.                +-+..+...-.         .
T Consensus       149 ~h~g~~NRvr~~~~----~~~~~~aswse~G~V~Vw~l~~~l~----------------~l~~~~~~~~~---------s  199 (440)
T KOG0302|consen  149 PHYGGINRVRVSRL----GNEVLCASWSENGRVQVWDLAPHLN----------------ALSEPGLEVKD---------S  199 (440)
T ss_pred             ccccccceeeeccc----CCcceeeeecccCcEEEEEchhhhh----------------hhcCccccccc---------c
Confidence            46667777776665    4456677777888888888753211                00011100000         0


Q ss_pred             eeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE---ecccCceee-eecccCCceeEEEECCC-CCEEEEEecC
Q psy15191        125 ETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL---DVTTWKQIQ-TLPCHQLTITQLAFSPD-DTHLVSVSRD  198 (312)
Q Consensus       125 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~---d~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d  198 (312)
                      ...++..+.+|...=++++|||-. -.|++|..-+.|++   ...+|..-. .+.+|+..|-.++|||. ...|++|+.|
T Consensus       200 ~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D  279 (440)
T KOG0302|consen  200 EFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD  279 (440)
T ss_pred             ccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC
Confidence            112233344777778999999932 34778887888888   123333322 24489999999999994 4588999999


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      |+|+|||+|.......+...     .|.+.|+.+.|+.+..+||+|+.||.++|||++.-+..         +++..+..
T Consensus       280 gsIrIWDiRs~~~~~~~~~k-----Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~---------~pVA~fk~  345 (440)
T KOG0302|consen  280 GSIRIWDIRSGPKKAAVSTK-----AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG---------QPVATFKY  345 (440)
T ss_pred             ceEEEEEecCCCccceeEee-----ccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC---------CcceeEEe
Confidence            99999999987433322221     18889999999998889999999999999999987544         27899999


Q ss_pred             cCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        279 HGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       279 ~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |..+|+++.|+|.. ..|+++|     +|.+|.||
T Consensus       346 Hk~pItsieW~p~e~s~iaasg-----~D~QitiW  375 (440)
T KOG0302|consen  346 HKAPITSIEWHPHEDSVIAASG-----EDNQITIW  375 (440)
T ss_pred             ccCCeeEEEeccccCceEEecc-----CCCcEEEE
Confidence            99999999999975 5666674     45559998

>KOG0650|consensus

Probab=99.92  E-value=1.7e-23  Score=168.46  Aligned_cols=246  Identities=19%  Similarity=0.196  Sum_probs=177.7

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------cccccc-------------
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMR-------------   94 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~-------------   94 (312)
                      .+...+.||.+.|.++...|.      |.+|++|+.||+|+||.+.++.++          ++.|.+             
T Consensus       391 ~~~lvyrGHtg~Vr~iSvdp~------G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~  464 (733)
T KOG0650|consen  391 RCALVYRGHTGLVRSISVDPS------GEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGE  464 (733)
T ss_pred             eeeeeEeccCCeEEEEEecCC------cceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecC
Confidence            455678899999999999998      999999999999999999999872          111111             


Q ss_pred             ----------------------------------------------------------------CCCCCceEEEEeCC--
Q psy15191         95 ----------------------------------------------------------------DDSKQLHLLSCSMD--  108 (312)
Q Consensus        95 ----------------------------------------------------------------~~~~~~~l~~~~~d--  108 (312)
                                                                                      ++..|.+|++...+  
T Consensus       465 ~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~  544 (733)
T KOG0650|consen  465 CVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSG  544 (733)
T ss_pred             ceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCC
Confidence                                                                            12222233332221  


Q ss_pred             -CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        109 -KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       109 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                       ..|.|.++.....       ...+....+.+.++.|+|...+|++++.. .|++ |+....+++.+......|.+|+.+
T Consensus       545 ~~~VliHQLSK~~s-------Q~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msih  616 (733)
T KOG0650|consen  545 NKSVLIHQLSKRKS-------QSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIH  616 (733)
T ss_pred             cceEEEEecccccc-------cCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeec
Confidence             2233333332111       11222345678899999999999988765 4566 777777777777677889999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      |.|..|+.++.|+.+..||+.-.. +.+.+..       |...+++|+|++.-.++++|+.||.+.|+.-.-.   ..+.
T Consensus       617 p~GDnli~gs~d~k~~WfDldlsskPyk~lr~-------H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY---~Dl~  686 (733)
T KOG0650|consen  617 PNGDNLILGSYDKKMCWFDLDLSSKPYKTLRL-------HEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVY---NDLL  686 (733)
T ss_pred             CCCCeEEEecCCCeeEEEEcccCcchhHHhhh-------hhhhhhhhhhccccceeeeecCCCcEEEEeeeee---hhhh
Confidence            999999999999999999998543 3333333       8899999999999999999999999999843211   1111


Q ss_pred             cccccceeEEeeccCcc----eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHGYE----IYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..+--++..+.+|...    |.++.|+|...+|++++.|     |+|++|
T Consensus       687 qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd-----~tirlf  732 (733)
T KOG0650|consen  687 QNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGAD-----GTIRLF  732 (733)
T ss_pred             cCCceEeeeeccCceeecccceEeecccCCCceEEecCCC-----ceEEee
Confidence            12222378888999876    9999999999999999555     449998

>KOG2048|consensus

Probab=99.92  E-value=3.3e-22  Score=163.11  Aligned_cols=233  Identities=15%  Similarity=0.192  Sum_probs=183.3

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      .--..+|.+++|+..      .+.||.+-.||.|-+|++...-..          .+....+. ++..|++.+.+|.|.-
T Consensus        22 d~~Ps~I~slA~s~k------S~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~E   94 (691)
T KOG2048|consen   22 DYKPSEIVSLAYSHK------SNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITE   94 (691)
T ss_pred             eeeccceEEEEEecc------CCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEE
Confidence            334678999999998      788999999999999999875331          22222333 4558999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee--eeecccCCceeEEEECCCCC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI--QTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~--~~~~~~~~~v~~~~~~~~~~  190 (312)
                      ||+.+.+....       .....+.|++++.+|.+..++.|++||.+.. +.....+.  ..+...+++|.+++|+|++.
T Consensus        95 wDl~~lk~~~~-------~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~  167 (691)
T KOG2048|consen   95 WDLHTLKQKYN-------IDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGT  167 (691)
T ss_pred             EecccCceeEE-------ecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCcc
Confidence            99998553322       2356678999999999999999999996666 44444333  23445678999999999999


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccc
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL  269 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  269 (312)
                      .+++|+.||.|++||...+..+............ ...-|+++.|-.+ ..|++|..-|.|.+||...+.          
T Consensus       168 ~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gT----------  236 (691)
T KOG2048|consen  168 KIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGT----------  236 (691)
T ss_pred             EEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcc----------
Confidence            9999999999999999998887755544333322 4456888888754 468999999999999998875          


Q ss_pred             cceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        270 WPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       270 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                        .++....|.+.|.+++..++++++++++.|++
T Consensus       237 --LiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~  268 (691)
T KOG2048|consen  237 --LIQSHSCHDADVLALAVADNEDRVFSAGVDPK  268 (691)
T ss_pred             --hhhhhhhhhcceeEEEEcCCCCeEEEccCCCc
Confidence              56777789999999999999999999977766

>KOG0269|consensus

Probab=99.92  E-value=9.8e-24  Score=174.38  Aligned_cols=231  Identities=13%  Similarity=0.198  Sum_probs=170.3

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------------cccccccCCCCCceEEEEeCCCc
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------------YLPYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------------~~~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      ..+.|...++      -..++.++. ..++||.+.....                  ..+.|.  .-..++|++++..|.
T Consensus        41 ~~nAIs~nr~------~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~--~~~~NlIAT~s~nG~  111 (839)
T KOG0269|consen   41 KANAISVNRD------INQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWG--QLYSNLIATCSTNGV  111 (839)
T ss_pred             ccceEeecCC------cceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccc--cchhhhheeecCCCc
Confidence            3445555565      455666654 3677776654322                  122222  224458999999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC-
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-  187 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-  187 (312)
                      |.+||+....    .......+..|...+.++.|++ ...+|++|+.||.|++ |++.-+....+.+....|+.+.|+| 
T Consensus       112 i~vWdlnk~~----rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~  187 (839)
T KOG0269|consen  112 ISVWDLNKSI----RNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPG  187 (839)
T ss_pred             EEEEecCccc----cchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccC
Confidence            9999998621    1223334568999999999998 4567889999999999 7777777777777888999999999 


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      .+.+|+++...|.+++||++...+......      .|.++|.++.|+|++.+||+|+.|+.|+|||+..+...      
T Consensus       188 ~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~------AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~------  255 (839)
T KOG0269|consen  188 YGNKFASIHDSGYLQLWDLRQPDRCEKKLT------AHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK------  255 (839)
T ss_pred             CCceEEEecCCceEEEeeccCchhHHHHhh------cccCceEEEeecCCCceeeecCCCccEEEEeccCCCcc------
Confidence            678899999999999999997654322111      19999999999999999999999999999999865321      


Q ss_pred             cccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                          +..++ ....+|..+.|-|... .||+++.   ..|..|+||
T Consensus       256 ----~~~tI-nTiapv~rVkWRP~~~~hLAtcsm---v~dtsV~VW  293 (839)
T KOG0269|consen  256 ----PKHTI-NTIAPVGRVKWRPARSYHLATCSM---VVDTSVHVW  293 (839)
T ss_pred             ----ceeEE-eecceeeeeeeccCccchhhhhhc---cccceEEEE
Confidence                22222 2357899999999864 5666655   568889998

>KOG0646|consensus

Probab=99.92  E-value=5e-23  Score=160.99  Aligned_cols=267  Identities=14%  Similarity=0.101  Sum_probs=192.3

Q ss_pred             ceEeCCCCeEEEEeccCCCc-------e---EEEE----------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSK-------V---MAVK----------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~-------v---~~~~----------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      .+|+..+|..+.++++-...       +   +-++          |............--.++|.+++-+|.      |.
T Consensus        21 ~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~------G~   94 (476)
T KOG0646|consen   21 IVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNL------GY   94 (476)
T ss_pred             eEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhhhhcccccceeeeecCCC------ce
Confidence            57999999988888764110       0   0010          332222222211123578999999888      98


Q ss_pred             eEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcce--eeeeeeecccCCCc
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL--WLETARVGEVGGNT  136 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~  136 (312)
                      +|+.|...|.|++|.+.+|..+        .+.+..++.++.+|++|+.||.|.+|++...-..  .....+...+..|.
T Consensus        95 ~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Ht  174 (476)
T KOG0646|consen   95 FLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHT  174 (476)
T ss_pred             EEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCc
Confidence            9999889999999999999873        5666667888999999999999999986531100  00233445566899


Q ss_pred             cceeEEEECCC--CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        137 LGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       137 ~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      .+|+++...+.  ..++++++.|.++++ |+....++..+. ....+++++.+|-+..++.|+.+|.|.+.++.......
T Consensus       175 lsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~  253 (476)
T KOG0646|consen  175 LSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQS  253 (476)
T ss_pred             ceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCccc
Confidence            99999988764  467999999999999 777666666665 67889999999999999999999999999886533110


Q ss_pred             E-----EeccC----CCCcccce--eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcc
Q psy15191        214 L-----VACSD----KTNGVHKR--IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE  282 (312)
Q Consensus       214 ~-----~~~~~----~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (312)
                      .     .....    .....|..  .|+|++.+-||.+|++|+.||.|.|||+....            +++++....++
T Consensus       254 ~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q------------~iRtl~~~kgp  321 (476)
T KOG0646|consen  254 AGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQ------------CIRTLQTSKGP  321 (476)
T ss_pred             ccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHH------------HHHHHhhhccc
Confidence            0     00000    00111555  99999999999999999999999999998763            55555555677


Q ss_pred             eeEEEeccCC
Q psy15191        283 IYSLAASHDG  292 (312)
Q Consensus       283 v~~~~~s~~~  292 (312)
                      |+.+.+.|-.
T Consensus       322 VtnL~i~~~~  331 (476)
T KOG0646|consen  322 VTNLQINPLE  331 (476)
T ss_pred             cceeEeeccc
Confidence            8888775543

>KOG0267|consensus

Probab=99.91  E-value=8.5e-25  Score=179.35  Aligned_cols=230  Identities=17%  Similarity=0.211  Sum_probs=189.5

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSII  112 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~  112 (312)
                      +.+-.|...|.++..-..      ++.+++|+.|..+-+|.+.....        ..+..+.++....++++|+.+|+|+
T Consensus        22 ~~~~~hsaav~~lk~~~s------~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK   95 (825)
T KOG0267|consen   22 REFVAHSAAVGCLKIRKS------SRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIK   95 (825)
T ss_pred             hhhhhhhhhhceeeeecc------ceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCcee
Confidence            345578888888887555      78999999999999998765443        2344555566777899999999999


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCE
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTH  191 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~  191 (312)
                      +||++..+.  +     ..+.+|...+.++.|+|-+.+.+.|+.|+.+.+ |.+...+...+.+|...+..+.|+|+|++
T Consensus        96 ~wDleeAk~--v-----rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~  168 (825)
T KOG0267|consen   96 VWDLEEAKI--V-----RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRW  168 (825)
T ss_pred             eeehhhhhh--h-----hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCce
Confidence            999997432  2     244588899999999999999999999999999 55544555667789999999999999999


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP  271 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  271 (312)
                      ++.++.|..+++||+..++....+..       |+..+..+.|+|..-++++|+.|+.|++||+++..            
T Consensus       169 v~~g~ed~tvki~d~~agk~~~ef~~-------~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe------------  229 (825)
T KOG0267|consen  169 VASGGEDNTVKIWDLTAGKLSKEFKS-------HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFE------------  229 (825)
T ss_pred             eeccCCcceeeeeccccccccccccc-------ccccccccccCchhhhhccCCCCceeeeeccceeE------------
Confidence            99999999999999998888877776       88889999999999999999999999999998642            


Q ss_pred             eeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        272 EVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       272 ~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      .+.........|.+++|+|++..+.+|....
T Consensus       230 ~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  230 VISSGKPETDGVRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             EeeccCCccCCceeeeecCCceeeecCchhh
Confidence            4444555577899999999999998886543

>KOG0275|consensus

Probab=99.91  E-value=7.7e-24  Score=158.86  Aligned_cols=224  Identities=17%  Similarity=0.229  Sum_probs=176.6

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEc--------cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEE
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLT--------NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAIL   79 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~v   79 (312)
                      -...++|+.+.+-  ..+....+ |+..+|++...++        -+..+|.|+.|+.+      ...||+|+.||.|++
T Consensus       219 A~FSPDgqyLvsg--SvDGFiEV-Wny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRD------sEMlAsGsqDGkIKv  289 (508)
T KOG0275|consen  219 ARFSPDGQYLVSG--SVDGFIEV-WNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRD------SEMLASGSQDGKIKV  289 (508)
T ss_pred             eeeCCCCceEeec--cccceeee-ehhccchhhhhhhhhhhcceeecccceEEEeeccc------HHHhhccCcCCcEEE
Confidence            3444556665432  22222233 8888877655433        47789999999999      889999999999999


Q ss_pred             eeecCCccc---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCe
Q psy15191         80 WKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY  150 (312)
Q Consensus        80 w~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  150 (312)
                      |.++++.++         .+.+..++.++..+++++.|.++++--+..++  ++     .++.+|...|+...|.++|..
T Consensus       290 Wri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK--~L-----KEfrGHsSyvn~a~ft~dG~~  362 (508)
T KOG0275|consen  290 WRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK--CL-----KEFRGHSSYVNEATFTDDGHH  362 (508)
T ss_pred             EEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch--hH-----HHhcCccccccceEEcCCCCe
Confidence            999999883         56677788888899999999999999988743  33     344599999999999999999


Q ss_pred             EEEeecCCeEEE-ecccCceeeeec-----------------------------------------------ccCCceeE
Q psy15191        151 IIAHGFQGSLHL-DVTTWKQIQTLP-----------------------------------------------CHQLTITQ  182 (312)
Q Consensus       151 l~~~~~~~~i~~-d~~~~~~~~~~~-----------------------------------------------~~~~~v~~  182 (312)
                      +++++.||.+++ +.++.+...+++                                               ...+...+
T Consensus       363 iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~  442 (508)
T KOG0275|consen  363 IISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFIN  442 (508)
T ss_pred             EEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEE
Confidence            999999999999 544444333222                                               11233445


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .+.+|.|.++++.++|+.++.|...+++....+..       |+..+..++-+|..+.||+-++||.+++|.
T Consensus       443 ~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V-------hEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  443 AILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV-------HEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EEecCCCcEEEEEccCcEEEEEEeecCceeeeeec-------ccccccccccCcccchhhhhcccchhhhcC
Confidence            67899999999999999999999998888777776       888888999999999999999999999994

>KOG2055|consensus

Probab=99.91  E-value=5.7e-22  Score=155.00  Aligned_cols=246  Identities=12%  Similarity=0.067  Sum_probs=177.5

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLS  104 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~  104 (312)
                      ...++.+.--..+|.+++|.|+      |. .+++++.......||+.+.+..           .+.....++++.+|+.
T Consensus       247 N~~lqS~~l~~fPi~~a~f~p~------G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~  320 (514)
T KOG2055|consen  247 NPKLQSIHLEKFPIQKAEFAPN------GHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAI  320 (514)
T ss_pred             ChhheeeeeccCccceeeecCC------CceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEE
Confidence            3445555555678889999988      77 8999999999999999887652           1222233677789999


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc--ee
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT--IT  181 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~--v~  181 (312)
                      .+..|.|.+....+.+  .+..++      -.+.|..++|+.+++.|++++.+|.|.+ |+++..++..+. -.+.  -+
T Consensus       321 ~G~~G~I~lLhakT~e--li~s~K------ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~-D~G~v~gt  391 (514)
T KOG2055|consen  321 AGNNGHIHLLHAKTKE--LITSFK------IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFV-DDGSVHGT  391 (514)
T ss_pred             cccCceEEeehhhhhh--hhheee------eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEe-ecCcccee
Confidence            9999999999887743  333333      3467899999999999999999999999 777766666665 2233  35


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc--CCeEEEEecCCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR--DGVCVVWGLGEPP  259 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~  259 (312)
                      +++.++++.+||+|+..|.|.|||..+...- .-+.+..........|+++.|+|++++||.+|.  +..+++-.+....
T Consensus       392 s~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s-~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~T  470 (514)
T KOG2055|consen  392 SLCISLNGSYLATGSDSGIVNIYDGNSCFAS-TNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCT  470 (514)
T ss_pred             eeeecCCCceEEeccCcceEEEeccchhhcc-CCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEecccee
Confidence            7788899999999999999999997642111 001111111115667999999999999988874  6688888876543


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .      -..|+..   ...-+.|++|+|||.|-+||.|     .++|.|.+|
T Consensus       471 V------FsNfP~~---n~~vg~vtc~aFSP~sG~lAvG-----Ne~grv~l~  509 (514)
T KOG2055|consen  471 V------FSNFPTS---NTKVGHVTCMAFSPNSGYLAVG-----NEAGRVHLF  509 (514)
T ss_pred             e------eccCCCC---CCcccceEEEEecCCCceEEee-----cCCCceeeE
Confidence            1      1122221   1233568999999999999999     455559988

>KOG2445|consensus

Probab=99.91  E-value=8.9e-22  Score=146.51  Aligned_cols=226  Identities=16%  Similarity=0.307  Sum_probs=158.3

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------------------cccccccCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------------------YLPYHMRDDS   97 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------------------~~~~~~~~~~   97 (312)
                      .+....+.|.+.|..+.|.+-    .-|+.+|+++.|+++.||.-.....                    ..+.|.+. .
T Consensus        50 ~~Ts~Wrah~~Si~rV~WAhP----EfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~-h  124 (361)
T KOG2445|consen   50 SCTSSWRAHDGSIWRVVWAHP----EFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPK-H  124 (361)
T ss_pred             EEeeeEEecCCcEEEEEecCc----cccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecch-h
Confidence            455677889999999999875    3489999999999999997632111                    23334333 3


Q ss_pred             CCceEEEEeCCCcEEEEcCCCCccee--eeeee----ecccCCCccceeEEEECCC---CCeEEEeecC-----CeEEE-
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLW--LETAR----VGEVGGNTLGFYGCKFGPR---GDYIIAHGFQ-----GSLHL-  162 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~----~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~-----~~i~~-  162 (312)
                      -|..+++++.||.++||+.-..-...  ..+..    ......+..+..|+.|+|.   ..+|++|+.+     +.+.| 
T Consensus       125 lGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iy  204 (361)
T KOG2445|consen  125 LGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIY  204 (361)
T ss_pred             cceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEE
Confidence            56689999999999999865422111  00001    1122346677889999974   4567777766     24444 


Q ss_pred             ----ecccCceeeeecccCCceeEEEECCC----CCEEEEEecCCeEEEEEccCCCe------------EEEEeccCC-C
Q psy15191        163 ----DVTTWKQIQTLPCHQLTITQLAFSPD----DTHLVSVSRDRRWGLYKRQSSGR------------LSLVACSDK-T  221 (312)
Q Consensus       163 ----d~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~------------~~~~~~~~~-~  221 (312)
                          +.+.|..+..+.+|+.+|+.++|.|+    -..|++++.|| |+||.+.....            ...+..... .
T Consensus       205 e~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~  283 (361)
T KOG2445|consen  205 EYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSE  283 (361)
T ss_pred             EecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeee
Confidence                55678888888899999999999994    35789999999 99999984210            000000000 0


Q ss_pred             CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      ...|.+.|..+.|+-.|..|++.+.||+||+|.....         ..|++...+..
T Consensus       284 ~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~---------n~~kC~sv~~~  331 (361)
T KOG2445|consen  284 LDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYN---------NLWKCTSVLKA  331 (361)
T ss_pred             ccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhh---------hhheeeeEEec
Confidence            1228999999999999999999999999999976553         34556666654

>KOG0267|consensus

Probab=99.91  E-value=2.2e-24  Score=176.97  Aligned_cols=217  Identities=18%  Similarity=0.251  Sum_probs=180.4

Q ss_pred             CceEEEecCCCcEEEeeecCCcccc--cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYL--PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC  142 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~  142 (312)
                      ...++....+-.+++|+.+......  +.+...-..+..+++|+.|..+.+|.+......       ..+.+|..+|.++
T Consensus         4 ~~~~m~~~~~t~Lr~~~~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i-------~S~~~hespIeSl   76 (825)
T KOG0267|consen    4 MEFLMKTKRATKLRVWDTREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAI-------TSLTGHESPIESL   76 (825)
T ss_pred             ccccceeeeeeccccccchhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchh-------heeeccCCcceee
Confidence            3445555566678899887654422  222222334457899999999999988763321       2246899999999


Q ss_pred             EECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC
Q psy15191        143 KFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT  221 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  221 (312)
                      .|+++..+|++|+.+|.|++ |++..+.++.+.+|...+.++.|+|-+.+++.++.|+.+.+||.+...+...+.+    
T Consensus        77 ~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s----  152 (825)
T KOG0267|consen   77 TFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKS----  152 (825)
T ss_pred             ecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecC----
Confidence            99999999999999999999 7777777778889999999999999999999999999999999998888887776    


Q ss_pred             CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                         |...+..+.|+|+|++++++++|..++|||+..+.            .+..+..|+..+.++.|+|..-++++||.|
T Consensus       153 ---~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk------------~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d  217 (825)
T KOG0267|consen  153 ---HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGK------------LSKEFKSHEGKVQSLEFHPLEVLLAPGSSD  217 (825)
T ss_pred             ---CcceeEEEeecCCCceeeccCCcceeeeecccccc------------cccccccccccccccccCchhhhhccCCCC
Confidence               77889999999999999999999999999998874            677888999999999999999999999666


Q ss_pred             CCcccceEEeC
Q psy15191        302 TKPEHAAIIIW  312 (312)
Q Consensus       302 ~~~~dg~i~iW  312 (312)
                      ++     |++|
T Consensus       218 ~t-----v~f~  223 (825)
T KOG0267|consen  218 RT-----VRFW  223 (825)
T ss_pred             ce-----eeee
Confidence            65     9998

>KOG1274|consensus

Probab=99.91  E-value=2.6e-21  Score=163.05  Aligned_cols=217  Identities=14%  Similarity=0.198  Sum_probs=170.2

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      +...|.+++-.        +.+|++|+.+++|.+|.+..++.        ..+..+..+.+|.+++.|+.|-.|++-++.
T Consensus        55 ~g~~v~~ia~~--------s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~  126 (933)
T KOG1274|consen   55 SGELVSSIACY--------SNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLD  126 (933)
T ss_pred             cCceeEEEeec--------ccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEecc
Confidence            56667666643        45899999999999999988765        344455567788899999999999999988


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec--------ccCCceeEEEECCC
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP--------CHQLTITQLAFSPD  188 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--------~~~~~v~~~~~~~~  188 (312)
                      +....  .     .+.+|..+|.++.|+|.+++|++.+.||.+++ ++.+..+...+.        .....+..++|+|+
T Consensus       127 D~s~~--~-----~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk  199 (933)
T KOG1274|consen  127 DSSQE--K-----VLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPK  199 (933)
T ss_pred             ccchh--e-----eecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCC
Confidence            74432  2     22489999999999999999999999999999 555555444433        11345678999999


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      +..|+....|+.|++|+.........+....     +...+..+.|+|+|+|||+++.||.|.|||..+..         
T Consensus       200 ~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~-----~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~---------  265 (933)
T KOG1274|consen  200 GGTLAVPPVDNTVKVYSRKGWELQFKLRDKL-----SSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE---------  265 (933)
T ss_pred             CCeEEeeccCCeEEEEccCCceeheeecccc-----cccceEEEEEcCCCcEEeeeccCCcEEEEecccch---------
Confidence            8888899999999999999888777766543     34448999999999999999999999999987631         


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                          .   ......|.+++|.|+.+-|-.-
T Consensus       266 ----~---~~~~~~Vc~~aw~p~~n~it~~  288 (933)
T KOG1274|consen  266 ----R---HEFKRAVCCEAWKPNANAITLI  288 (933)
T ss_pred             ----h---ccccceeEEEecCCCCCeeEEE
Confidence                1   1224678999999988765444

>KOG0321|consensus

Probab=99.90  E-value=7.9e-22  Score=160.00  Aligned_cols=240  Identities=18%  Similarity=0.237  Sum_probs=169.7

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------------cccccCCCCCceEEEEe
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------------PYHMRDDSKQLHLLSCS  106 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------------~~~~~~~~~~~~l~~~~  106 (312)
                      +..+..|.+.|..+.|.|.      ...|++++.|.++++||+...+...             +.+.+..+  ..|++|+
T Consensus        93 lk~~~aH~nAifDl~wapg------e~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~--~vF~tGg  164 (720)
T KOG0321|consen   93 LKKPLAHKNAIFDLKWAPG------ESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNP--AVFCTGG  164 (720)
T ss_pred             hcccccccceeEeeccCCC------ceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCC--cceeecc
Confidence            3556689999999999998      7899999999999999999877632             23333333  3899999


Q ss_pred             CCCcEEEEcCCCCcceeee--------------------eeeecccCCCccceeE---EEECCCCCeEEEeec-CCeEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLE--------------------TARVGEVGGNTLGFYG---CKFGPRGDYIIAHGF-QGSLHL  162 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~--------------------~~~~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-~~~i~~  162 (312)
                      .||.|.|||++-.......                    .........+...+.+   +.+..|...|++++. |+.|++
T Consensus       165 RDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKV  244 (720)
T KOG0321|consen  165 RDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKV  244 (720)
T ss_pred             CCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEE
Confidence            9999999998753311000                    0001111223334444   556678888888877 999999


Q ss_pred             ecccCceeeeec-------------cc---CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe--EEEEeccCCCCcc
Q psy15191        163 DVTTWKQIQTLP-------------CH---QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR--LSLVACSDKTNGV  224 (312)
Q Consensus       163 d~~~~~~~~~~~-------------~~---~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~  224 (312)
                          |++.+...             .|   .-.+.++.....|.+|++.+.|+.|++|++.+...  ...+.+..     
T Consensus       245 ----WDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~-----  315 (720)
T KOG0321|consen  245 ----WDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKL-----  315 (720)
T ss_pred             ----EeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcc-----
Confidence                66555432             12   23567788888889998888899999999987543  22222221     


Q ss_pred             cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCC
Q psy15191        225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATK  303 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~  303 (312)
                      ....-..-..+|++.+|++|+.|...++|.+.....           ....+.+|...|+.++|.|.. .-+++++.|.+
T Consensus       316 ~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~-----------~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~  384 (720)
T KOG0321|consen  316 NSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA-----------PPALLLGHTREVTTVRWLPSATTPVATCSDDFR  384 (720)
T ss_pred             cceeeeeeecCCCCceEeccCCCcceeeeeecCccC-----------ChhhhhCcceEEEEEeeccccCCCceeeccCcc
Confidence            111122335689999999999999999999877643           566778999999999998753 35677766655


Q ss_pred             cccceEEeC
Q psy15191        304 PEHAAIIIW  312 (312)
Q Consensus       304 ~~dg~i~iW  312 (312)
                           ++||
T Consensus       385 -----~kiW  388 (720)
T KOG0321|consen  385 -----VKIW  388 (720)
T ss_pred             -----eEEE
Confidence                 9998

>KOG1273|consensus

Probab=99.90  E-value=9.3e-22  Score=147.01  Aligned_cols=261  Identities=19%  Similarity=0.225  Sum_probs=183.9

Q ss_pred             CCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------ccccccC
Q psy15191         23 HKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRD   95 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~   95 (312)
                      -.+.|  +.||..+....+.+.+|..+|.+++|+++      |+.|+|+|.|..|.+||+..+.+.       .+....+
T Consensus        43 ~nG~v--vI~D~~T~~iar~lsaH~~pi~sl~WS~d------gr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~  114 (405)
T KOG1273|consen   43 ANGRV--VIYDFDTFRIARMLSAHVRPITSLCWSRD------GRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQW  114 (405)
T ss_pred             cCCcE--EEEEccccchhhhhhccccceeEEEecCC------CCEeeeecCCceeEEEeccCCCceeEEEccCccceeee
Confidence            34444  55888888899999999999999999999      999999999999999999998863       2222233


Q ss_pred             CCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee
Q psy15191         96 DSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus        96 ~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~  173 (312)
                      +|.. +.++++-.+..-.+-++..+....+..-.-   ...+....+..|.+.|+++++|...|.+.+ +..+.+++..+
T Consensus       115 hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d---~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~  191 (405)
T KOG1273|consen  115 HPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDD---GDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASF  191 (405)
T ss_pred             ccccCCeEEEEEecCCcEEEEecCCceeeccCCCc---cccccccccccccCCCCEEEEecCcceEEEEecchheeeeee
Confidence            3322 234444444444444544433332222111   111222334478999999999999999999 99988988888


Q ss_pred             cccC-CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE---EEEeccCCC-CcccceeeEEEEEcCCCceEEEecc-C
Q psy15191        174 PCHQ-LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL---SLVACSDKT-NGVHKRIIWGVAWSHDSRYFLTISR-D  247 (312)
Q Consensus       174 ~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~-d  247 (312)
                      +-.. ..|..+.++..|++|+.-+.|+.||.|+++.--..   .......+. ....+..-.+++|+.+|.|+++++. .
T Consensus       192 rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~a  271 (405)
T KOG1273|consen  192 RITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARA  271 (405)
T ss_pred             eechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccc
Confidence            7554 78999999999999999999999999998742111   000100000 0003334557899999999988874 4


Q ss_pred             CeEEEEecCCCCCCcccccccccceeEEeeccC-cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG-YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..++||.-..+.            .++.+.|.. ....++.|+|-...+++-      +.|.|+||
T Consensus       272 HaLYIWE~~~Gs------------LVKILhG~kgE~l~DV~whp~rp~i~si------~sg~v~iw  319 (405)
T KOG1273|consen  272 HALYIWEKSIGS------------LVKILHGTKGEELLDVNWHPVRPIIASI------ASGVVYIW  319 (405)
T ss_pred             eeEEEEecCCcc------------eeeeecCCchhheeecccccceeeeeec------cCCceEEE
Confidence            589999987774            677888776 567889999998877776      45669998

>KOG1063|consensus

Probab=99.90  E-value=6.1e-21  Score=156.22  Aligned_cols=273  Identities=18%  Similarity=0.258  Sum_probs=189.3

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCCC------------------------ceEEEEccccCcEEEEEEecCcCcCC
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGG------------------------KVLYTLTNHKSKVMAVKWVLNTSLDP   63 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~   63 (312)
                      ++++.+-..+.++.||..+|+|+.|-+.+.                        ..+.++.+|...+.|+.-.+.     
T Consensus        38 v~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~-----  112 (764)
T KOG1063|consen   38 VADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSS-----  112 (764)
T ss_pred             EeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeee-----
Confidence            466666667788899999999998875431                        234556666666555543222     


Q ss_pred             CCceEEEecCCCcEEEeeecCCcc---------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  128 (312)
                         .....+.|+.+.+||.+..+.               ++....+ .++.-.++.|+.+..|.++.-...+.     ..
T Consensus       113 ---~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~-~~~~~lla~Ggs~~~v~~~s~~~d~f-----~~  183 (764)
T KOG1063|consen  113 ---VMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALK-NNKTFLLACGGSKFVVDLYSSSADSF-----AR  183 (764)
T ss_pred             ---EEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhc-cCCcEEEEecCcceEEEEeccCCcce-----eE
Confidence               222237899999999966552               1222222 33333566677777888886654322     23


Q ss_pred             ecccCCCccceeEEEECCCCC---eEEEeecCCeEEE-ecccCceee---------------------e----------e
Q psy15191        129 VGEVGGNTLGFYGCKFGPRGD---YIIAHGFQGSLHL-DVTTWKQIQ---------------------T----------L  173 (312)
Q Consensus       129 ~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~~~i~~-d~~~~~~~~---------------------~----------~  173 (312)
                      ...+.+|...|.+++|...+.   +|++++.|..|+| .+.-++...                     .          +
T Consensus       184 v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall  263 (764)
T KOG1063|consen  184 VAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALL  263 (764)
T ss_pred             EEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhh
Confidence            344569999999999987543   7889999999999 222111000                     0          1


Q ss_pred             cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      .+|.+.|+++.|+|.+..|++++.|.++.+|...+..-+-.-..-..........-.+..|+|++..+++-+.-|-.++|
T Consensus       264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlW  343 (764)
T KOG1063|consen  264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLW  343 (764)
T ss_pred             cCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEE
Confidence            18999999999999999999999999999998876533222111111111134457788999999999999999999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ....         ...|.....+.||-..|.+++|+|.|.+|++.|.|.+
T Consensus       344 kt~d---------~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQT  384 (764)
T KOG1063|consen  344 KTKD---------KTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQT  384 (764)
T ss_pred             eccC---------ccceeeccccccccccceeeeecCCCCEEEEeccccc
Confidence            8222         4456677778899999999999999999999977766

>KOG1408|consensus

Probab=99.90  E-value=5.4e-22  Score=163.23  Aligned_cols=110  Identities=25%  Similarity=0.318  Sum_probs=93.8

Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC---CCceEEEeccCCeEEE
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH---DSRYFLTISRDGVCVV  252 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~i  252 (312)
                      ....+.+++.+|+|++|++|..-|.+++|++...+....+..       |+..|.++.++-   ..++||+++.|.-|+|
T Consensus       458 ~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eA-------HesEilcLeyS~p~~~~kLLASasrdRlIHV  530 (1080)
T KOG1408|consen  458 SRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEA-------HESEILCLEYSFPVLTNKLLASASRDRLIHV  530 (1080)
T ss_pred             cccceEEEEECCCcceecccCccCceEEEEehhhhhhhheec-------ccceeEEEeecCchhhhHhhhhccCCceEEE
Confidence            345689999999999999999999999999998776665555       999999999984   3578999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC--CeEEEEecCCC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG--TLLASACKATK  303 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~s~d~~  303 (312)
                      ||+...-           .+++++.+|+..|+++.|.-.|  ..+++++.|+.
T Consensus       531 ~Dv~rny-----------~l~qtld~HSssITsvKFa~~gln~~MiscGADks  572 (1080)
T KOG1408|consen  531 YDVKRNY-----------DLVQTLDGHSSSITSVKFACNGLNRKMISCGADKS  572 (1080)
T ss_pred             Eeccccc-----------chhhhhcccccceeEEEEeecCCceEEEeccCchh
Confidence            9986553           3788999999999999998887  77888866654

>KOG4328|consensus

Probab=99.90  E-value=9.1e-22  Score=153.71  Aligned_cols=243  Identities=14%  Similarity=0.114  Sum_probs=170.8

Q ss_pred             CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------cccccccCCCCCc
Q psy15191         36 GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSKQL  100 (312)
Q Consensus        36 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~~~  100 (312)
                      .-......+-+..+|++++|+|.    .+-+++|+|+.-|+|-+||+.+.+.               ..+.|.+.+  ..
T Consensus       175 ~~~~~~v~kv~~~Rit~l~fHPt----~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n--~s  248 (498)
T KOG4328|consen  175 DYRILNVAKVTDRRITSLAFHPT----ENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPAN--TS  248 (498)
T ss_pred             cceecceeEecccceEEEEeccc----CcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCC--hh
Confidence            34455666778899999999998    4447899999999999999964332               123333333  33


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce-eeeecccCC
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-IQTLPCHQL  178 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~-~~~~~~~~~  178 (312)
                      .+++.+.||+|+.-|++......+....     .....+.++.|+.+...++.+..=|...+ |.++... ...+.-|..
T Consensus       249 ~i~ssSyDGtiR~~D~~~~i~e~v~s~~-----~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k  323 (498)
T KOG4328|consen  249 QIYSSSYDGTIRLQDFEGNISEEVLSLD-----TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK  323 (498)
T ss_pred             heeeeccCceeeeeeecchhhHHHhhcC-----ccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhc
Confidence            7999999999999999875433333221     34456778889888888888887777777 6665544 334556888


Q ss_pred             ceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        179 TITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       179 ~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      .|.+|+++| ...+|+|++.|++++|||++.......   +......|...|.++.|||.+-.|++.+.|..|+|||..-
T Consensus       324 KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s---p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~  400 (498)
T KOG4328|consen  324 KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS---PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSC  400 (498)
T ss_pred             ccceeecCCCCchheeecccCcceeeeehhhhcCCCC---cceecccccceeeeeEEcCCCCceEeeccCCceEEeeccc
Confidence            999999999 556899999999999999997543332   0011112899999999999988899999999999999841


Q ss_pred             CCCCcccccccccceeEEeec---cCc--ceeEEEeccCCCeEEEEec
Q psy15191        258 PPTEEDLVQNTLWPEVQKLYG---HGY--EIYSLAASHDGTLLASACK  300 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~---~~~--~v~~~~~s~~~~~l~s~s~  300 (312)
                      -...        .++...+..   +..  ...-.+|.|+..+++.|-.
T Consensus       401 ~sa~--------~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~  440 (498)
T KOG4328|consen  401 ISAK--------DEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRY  440 (498)
T ss_pred             cccc--------CCccceeeccCcccccccchhheeCCCccEEEEecc
Confidence            1000        012222221   111  2334679999998888854

>KOG0647|consensus

Probab=99.89  E-value=4.5e-21  Score=142.41  Aligned_cols=203  Identities=16%  Similarity=0.198  Sum_probs=148.3

Q ss_pred             ccccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc
Q psy15191         89 LPYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT  166 (312)
Q Consensus        89 ~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~  166 (312)
                      .+..+.++| ...++++++.|++|++|++... +....    .....+.++|.+++|+.+|..+++|+.|+.+++ |+.+
T Consensus        29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-g~~~~----ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S  103 (347)
T KOG0647|consen   29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNS-GQLVP----KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS  103 (347)
T ss_pred             chheeEeccccCceEEecccCCceEEEEEecC-Ccccc----hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence            334444455 4446779999999999999873 11111    233468899999999999999999999999999 6666


Q ss_pred             CceeeeecccCCceeEEEECCCCC--EEEEEecCCeEEEEEccCCCeEEEEeccCCCC----------------------
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDDT--HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN----------------------  222 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~----------------------  222 (312)
                      .+... ...|..+|..+.|-+...  .|+||+.|++|++||++...++..+..++...                      
T Consensus       104 ~Q~~~-v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vyn  182 (347)
T KOG0647|consen  104 GQVSQ-VAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYN  182 (347)
T ss_pred             CCeee-eeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEE
Confidence            64443 446999999999988655  89999999999999999876665555433220                      


Q ss_pred             ------------cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC---------c
Q psy15191        223 ------------GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG---------Y  281 (312)
Q Consensus       223 ------------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  281 (312)
                                  ...+-.+.+++..++....+.|+-+|.+.|..+..+....          -..++-|.         -
T Consensus       183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~----------nFtFkCHR~~~~~~~~VY  252 (347)
T KOG0647|consen  183 LENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKD----------NFTFKCHRSTNSVNDDVY  252 (347)
T ss_pred             cCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccC----------ceeEEEeccCCCCCCceE
Confidence                        0023456778887788778889999998888887753321          22233332         2


Q ss_pred             ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        282 EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       282 ~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|++++|+|.-..|+|+|.||.     ..+|
T Consensus       253 aVNsi~FhP~hgtlvTaGsDGt-----f~FW  278 (347)
T KOG0647|consen  253 AVNSIAFHPVHGTLVTAGSDGT-----FSFW  278 (347)
T ss_pred             EecceEeecccceEEEecCCce-----EEEe
Confidence            5889999999999999955554     8888

>KOG1539|consensus

Probab=99.89  E-value=2.2e-21  Score=161.89  Aligned_cols=215  Identities=19%  Similarity=0.179  Sum_probs=175.9

Q ss_pred             EEeccCCCceEEEEEeCCCCce-EEEEc-----cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc
Q psy15191         18 YTLTNHKSKVMAVKWNGEGGKV-LYTLT-----NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY   91 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~~~-~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~   91 (312)
                      ..+..|.+...+-.|+..+... ...|.     .-...+++++.+++      |++.+.|...|.|-+||++.+-....+
T Consensus       413 Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C------GNF~~IG~S~G~Id~fNmQSGi~r~sf  486 (910)
T KOG1539|consen  413 NVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC------GNFVFIGYSKGTIDRFNMQSGIHRKSF  486 (910)
T ss_pred             ceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEecc------CceEEEeccCCeEEEEEcccCeeeccc
Confidence            3455678888888899877655 23332     12378999999999      999999999999999999987653222


Q ss_pred             -----------cccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeE
Q psy15191         92 -----------HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL  160 (312)
Q Consensus        92 -----------~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i  160 (312)
                                 -......+..+++++.+|.+++||.....  ......      -...+.++..+.....++.+..|-.|
T Consensus       487 ~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~--l~~~l~------l~~~~~~iv~hr~s~l~a~~~ddf~I  558 (910)
T KOG1539|consen  487 GDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV--LKKSLR------LGSSITGIVYHRVSDLLAIALDDFSI  558 (910)
T ss_pred             ccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcc--eeeeec------cCCCcceeeeeehhhhhhhhcCceeE
Confidence                       22334455679999999999999998743  222222      34557888889988899999999999


Q ss_pred             EE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191        161 HL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR  239 (312)
Q Consensus       161 ~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  239 (312)
                      ++ |..+.++.+.+.+|.+.|++++|||||++|++++.|++|++||+.++..+-.+.        ...+++++.|+|+|.
T Consensus       559 ~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~--------vd~~~~sls~SPngD  630 (910)
T KOG1539|consen  559 RVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL--------VDSPCTSLSFSPNGD  630 (910)
T ss_pred             EEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe--------cCCcceeeEECCCCC
Confidence            99 999999999999999999999999999999999999999999999999888777        566788999999999


Q ss_pred             eEEEeccC-CeEEEEe
Q psy15191        240 YFLTISRD-GVCVVWG  254 (312)
Q Consensus       240 ~l~s~~~d-g~i~iwd  254 (312)
                      +||+...| .-|++|.
T Consensus       631 ~LAT~Hvd~~gIylWs  646 (910)
T KOG1539|consen  631 FLATVHVDQNGIYLWS  646 (910)
T ss_pred             EEEEEEecCceEEEEE
Confidence            99999988 5799995

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=1.5e-19  Score=145.46  Aligned_cols=223  Identities=13%  Similarity=0.116  Sum_probs=152.1

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEE-EecCCCcEEEeeecCCcccc-------cccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV-SCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~  103 (312)
                      |+..+++.+..+..+.. +..++|+|+      ++.++ +++.|+.|++||+.+.+...       +....+++++..++
T Consensus        58 ~d~~~~~~~~~~~~~~~-~~~~~~~~~------g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~  130 (300)
T TIGR03866        58 IDLATGEVIGTLPSGPD-PELFALHPN------GKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVV  130 (300)
T ss_pred             EECCCCcEEEeccCCCC-ccEEEECCC------CCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEE
Confidence            55555555555554433 567788887      77665 45678999999998765421       22334567888888


Q ss_pred             EEeCCC-cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecccC---
Q psy15191        104 SCSMDK-SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQ---  177 (312)
Q Consensus       104 ~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~---  177 (312)
                      +++.++ .+.+||..+.+.  .....      ....+..++|+|+++++++++ .++.+.+ |+++++....+..+.   
T Consensus       131 ~~~~~~~~~~~~d~~~~~~--~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~  202 (300)
T TIGR03866       131 NTSETTNMAHFIDTKTYEI--VDNVL------VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGV  202 (300)
T ss_pred             EEecCCCeEEEEeCCCCeE--EEEEE------cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeeccccc
Confidence            888765 467788876432  22111      112356789999999886554 5889988 777776655443111   


Q ss_pred             --C--ceeEEEECCCCCEEEE-EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEE
Q psy15191        178 --L--TITQLAFSPDDTHLVS-VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCV  251 (312)
Q Consensus       178 --~--~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~  251 (312)
                        .  ....++|+|++++++. .+.++.+.+||+++.+....+.        +...+.+++|+|+|++|+++ ..+|.|.
T Consensus       203 ~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~~~~~i~  274 (300)
T TIGR03866       203 HPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL--------VGQRVWQLAFTPDEKYLLTTNGVSNDVS  274 (300)
T ss_pred             ccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE--------eCCCcceEEECCCCCEEEEEcCCCCeEE
Confidence              1  2346889999998654 4556789999998776655443        33458899999999999876 4689999


Q ss_pred             EEecCCCCCCcccccccccceeEEeeccCcceeEEEecc
Q psy15191        252 VWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       252 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  290 (312)
                      +||+..+.            .+..+.. ....++++++|
T Consensus       275 v~d~~~~~------------~~~~~~~-~~~~~~~~~~~  300 (300)
T TIGR03866       275 VIDVAALK------------VIKSIKV-GRLPWGVVVRP  300 (300)
T ss_pred             EEECCCCc------------EEEEEEc-ccccceeEeCC
Confidence            99998873            4566654 35558888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2919|consensus

Probab=99.89  E-value=2.3e-21  Score=145.40  Aligned_cols=232  Identities=20%  Similarity=0.275  Sum_probs=169.1

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------------------c----ccccccCCCCCc
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------------------Y----LPYHMRDDSKQL  100 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------------------~----~~~~~~~~~~~~  100 (312)
                      -...+.|+|+      |..|++-+.|..+.+|++.....                        +    ........|+..
T Consensus        51 f~kgckWSPD------GSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~  124 (406)
T KOG2919|consen   51 FLKGCKWSPD------GSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTN  124 (406)
T ss_pred             hhccceeCCC------CceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccc
Confidence            4557788888      99999999999999998743211                        0    111112356777


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ec-ccCcee---ee---
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DV-TTWKQI---QT---  172 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~-~~~~~~---~~---  172 (312)
                      ++++.+.+..|++||.-+++.......-  .....-....+++|+|||.+|++| ....|++ |+ +.+.-.   ..   
T Consensus       125 l~a~ssr~~PIh~wdaftG~lraSy~~y--dh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~  201 (406)
T KOG2919|consen  125 LFAVSSRDQPIHLWDAFTGKLRASYRAY--DHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTK  201 (406)
T ss_pred             eeeeccccCceeeeeccccccccchhhh--hhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhc
Confidence            9999999999999999986644332211  111122345789999999999875 4567777 55 333211   11   


Q ss_pred             -ecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCe
Q psy15191        173 -LPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGV  249 (312)
Q Consensus       173 -~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~  249 (312)
                       ..+..+-+.+++|+| +...++.++....+-||.-....++..+.+       |.+.|+.+.|.++|+.|.+|+. |-.
T Consensus       202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llgg-------h~gGvThL~~~edGn~lfsGaRk~dk  274 (406)
T KOG2919|consen  202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGG-------HGGGVTHLQWCEDGNKLFSGARKDDK  274 (406)
T ss_pred             ccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecc-------cCCCeeeEEeccCcCeecccccCCCe
Confidence             124467889999999 555899999999999999888888887775       9999999999999999999985 668


Q ss_pred             EEEEecCCCCCCcccccccccceeEEeeccCc-ceeE--EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY-EIYS--LAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       250 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~--~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |..||++....           ++..+..|.. .=..  +...|+|++|++|     +.||.|++|
T Consensus       275 Il~WDiR~~~~-----------pv~~L~rhv~~TNQRI~FDld~~~~~LasG-----~tdG~V~vw  324 (406)
T KOG2919|consen  275 ILCWDIRYSRD-----------PVYALERHVGDTNQRILFDLDPKGEILASG-----DTDGSVRVW  324 (406)
T ss_pred             EEEEeehhccc-----------hhhhhhhhccCccceEEEecCCCCceeecc-----CCCccEEEE
Confidence            99999987642           5666766655 2223  4457899999999     556669999

>KOG1007|consensus

Probab=99.89  E-value=1.8e-20  Score=138.57  Aligned_cols=265  Identities=17%  Similarity=0.277  Sum_probs=184.2

Q ss_pred             CCceEEEEEeCCCCceEE-EEccccCcEEEEEEecCcCcCCCCceEEEecCC-------CcEEEeeecCCcc--------
Q psy15191         24 KSKVMAVKWNGEGGKVLY-TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-------KTAILWKYVSEGN--------   87 (312)
Q Consensus        24 ~~~v~~~~w~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-------g~i~vw~~~~~~~--------   87 (312)
                      .+.|.-+.++.+.+.+.. .|..|.++|+.++-+|.     +.++|+|+-.|       -.+.||.+.....        
T Consensus        39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~-----d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE  113 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPF-----DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLE  113 (370)
T ss_pred             cceeEEEEecCccchhhhhhhhcCCcceehhhcCCC-----CCceEEEEEeccCCCcceeeEEEEecccccCccccchhh
Confidence            467888888888777654 46667899999999997     45677777543       2477998754322        


Q ss_pred             ----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC--CCCeEEEee
Q psy15191         88 ----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP--RGDYIIAHG  155 (312)
Q Consensus        88 ----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~  155 (312)
                                ..+.+..+.|++..+++-. |..|.+|++...... ..........++....++-+|+|  +++.+++. 
T Consensus       114 ~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~-vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-  190 (370)
T KOG1007|consen  114 CVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKI-VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-  190 (370)
T ss_pred             HhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcch-heeecccccccccceecccccCCCCccceEEEe-
Confidence                      2345556677777777766 888999999875432 22222222334566788899998  77777664 


Q ss_pred             cCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEE
Q psy15191        156 FQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWG  231 (312)
Q Consensus       156 ~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~  231 (312)
                      .++++.. |+++.+....+. +|...|..+.|+|+.+ +|++|+.||.|++||.+..+. +..+..       |...|++
T Consensus       191 ~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~-------HsHWvW~  263 (370)
T KOG1007|consen  191 SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPG-------HSHWVWA  263 (370)
T ss_pred             CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCC-------CceEEEE
Confidence            5667777 666655544444 7888999999999765 678899999999999996543 333333       9999999


Q ss_pred             EEEcCC-CceEEEeccCCeEEEEecCCCCCCccccc-------------cc----ccceeEEeeccCcceeEEEeccCCC
Q psy15191        232 VAWSHD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQ-------------NT----LWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       232 ~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------~~----~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      +.|+|. .+++++|+.|..|.+|....-..+..+..             .+    .-..+.++..|+..|++++||.-..
T Consensus       264 VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadP  343 (370)
T KOG1007|consen  264 VRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADP  343 (370)
T ss_pred             EEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCC
Confidence            999995 46788999999999997654432221110             00    0014557778999999999987554


Q ss_pred             -eEEEEecCCC
Q psy15191        294 -LLASACKATK  303 (312)
Q Consensus       294 -~l~s~s~d~~  303 (312)
                       .+|+-|.||.
T Consensus       344 WiFASLSYDGR  354 (370)
T KOG1007|consen  344 WIFASLSYDGR  354 (370)
T ss_pred             eeEEEeccCce
Confidence             5566655544

>KOG4328|consensus

Probab=99.88  E-value=1.4e-20  Score=147.18  Aligned_cols=270  Identities=13%  Similarity=0.129  Sum_probs=186.4

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCC-------------------------ceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGG-------------------------KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~-------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      -......+-+..+|++++|.|...                         .-+..+..|..+|.++.|+|.     +...+
T Consensus       176 ~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~-----n~s~i  250 (498)
T KOG4328|consen  176 YRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPA-----NTSQI  250 (498)
T ss_pred             ceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCC-----Chhhe
Confidence            344445555677777777554321                         224567789999999999997     34578


Q ss_pred             EEecCCCcEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         69 VSCSLDKTAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      ++.|.||+|++-|++.....          ....+.+..+...++.+..=|...+||.++......      ...-|...
T Consensus       251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~------~~~lh~kK  324 (498)
T KOG4328|consen  251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYE------NLRLHKKK  324 (498)
T ss_pred             eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccch------hhhhhhcc
Confidence            99999999999999876541          111223344455677777777999999998653221      12245668


Q ss_pred             eeEEEECCCC-CeEEEeecCCeEEE-ecccCceeee----ecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc----C
Q psy15191        139 FYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQT----LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ----S  208 (312)
Q Consensus       139 v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~----~  208 (312)
                      |.+++++|.. .+|++++.|+..+| |++.......    ...|...|.+..|||.+-.|+|.+.|..|+|||..    .
T Consensus       325 I~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~  404 (498)
T KOG4328|consen  325 ITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAK  404 (498)
T ss_pred             cceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeeccccccc
Confidence            9999999965 56889999999999 5554433332    22689999999999988789999999999999984    3


Q ss_pred             CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCc-ceeE-E
Q psy15191        209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY-EIYS-L  286 (312)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~-~  286 (312)
                      ..+...+..... ...+-. .....|.|+..+++.|..-..|-|+|-..+.            .+..+..... .|.+ .
T Consensus       405 ~~p~~~I~Hn~~-t~RwlT-~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q------------~v~el~~P~~~tI~~vn  470 (498)
T KOG4328|consen  405 DEPLGTIPHNNR-TGRWLT-PFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ------------MVCELHDPESSTIPSVN  470 (498)
T ss_pred             CCccceeeccCc-cccccc-chhheeCCCccEEEEeccCcceeEEcCCCCE------------EeeeccCccccccccce
Confidence            333333332211 111222 3346899999999999988889999876652            3455444333 4544 4


Q ss_pred             EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        287 AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       287 ~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|+|-+..+++|+    ...|.|+||
T Consensus       471 ~~HP~~~~~~aG~----~s~Gki~vf  492 (498)
T KOG4328|consen  471 EFHPMRDTLAAGG----NSSGKIYVF  492 (498)
T ss_pred             eecccccceeccC----CccceEEEE
Confidence            8999998777776    556678887

>KOG0270|consensus

Probab=99.88  E-value=1.1e-20  Score=147.13  Aligned_cols=234  Identities=15%  Similarity=0.190  Sum_probs=161.5

Q ss_pred             EEEEEEecCc-CcCCCCceEEEecCCCcEEEeeecCCcccc-----------------------------cccccC-CCC
Q psy15191         50 VMAVKWVLNT-SLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------------------------PYHMRD-DSK   98 (312)
Q Consensus        50 v~~~~~~~~~-~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------------------------~~~~~~-~~~   98 (312)
                      ..|++|.... .-..-|+++|.|..|..|.|||+.-.....                             +..+.+ ...
T Consensus       176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~  255 (463)
T KOG0270|consen  176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF  255 (463)
T ss_pred             chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence            3566664331 011236899999999999999986432210                             011111 122


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeeccc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      ...|++|+.|.+|++||+.++++..  .+     ..|...|.++.|+| ....|++|+.|+.+.+ |.+.-......-..
T Consensus       256 ~nVLaSgsaD~TV~lWD~~~g~p~~--s~-----~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~  328 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVDTGKPKS--SI-----THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF  328 (463)
T ss_pred             ceeEEecCCCceEEEEEcCCCCcce--eh-----hhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe
Confidence            3479999999999999999965432  22     36888999999999 5677999999999999 76642221111135


Q ss_pred             CCceeEEEECCC-CCEEEEEecCCeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEE
Q psy15191        177 QLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVW  253 (312)
Q Consensus       177 ~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iw  253 (312)
                      .+.|-.++|.|. ...+++++.||+++-+|+|.. +++..+..       |..+|.++++++.- .+|++++.|+.|++|
T Consensus       329 ~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A-------Hd~~ISgl~~n~~~p~~l~t~s~d~~Vklw  401 (463)
T KOG0270|consen  329 DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA-------HDDEISGLSVNIQTPGLLSTASTDKVVKLW  401 (463)
T ss_pred             ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEe-------ccCCcceEEecCCCCcceeeccccceEEEE
Confidence            678999999994 456777889999999999987 55666555       89999999999765 468899999999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++.......          +..-.-.-+...++++.|+-. +||.|     ++.+.++||
T Consensus       402 ~~~~~~~~~----------v~~~~~~~~rl~c~~~~~~~a~~la~G-----G~k~~~~vw  446 (463)
T KOG0270|consen  402 KFDVDSPKS----------VKEHSFKLGRLHCFALDPDVAFTLAFG-----GEKAVLRVW  446 (463)
T ss_pred             eecCCCCcc----------cccccccccceeecccCCCcceEEEec-----CccceEEEe
Confidence            987653311          111000112356777788754 55666     555568888

>KOG0322|consensus

Probab=99.88  E-value=1.2e-21  Score=142.90  Aligned_cols=246  Identities=18%  Similarity=0.191  Sum_probs=172.0

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCCC
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      +...+++|.+.|+++.|-.+       .+|++|..-|.|++|++.+.+..         .+.....-++ ..+.+-+.|.
T Consensus         6 P~fvLRp~~~~v~s~~fqa~-------~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~   77 (323)
T KOG0322|consen    6 PFFVLRPHSSSVTSVLFQAN-------ERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDP   77 (323)
T ss_pred             CeeEeccccchheehhhccc-------hhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCc
Confidence            45667789999999998776       46999999999999999887763         2222222333 4788889999


Q ss_pred             cEEEEcCCCCcceeeeeeee----------------------------------------------cccCCCccceeEEE
Q psy15191        110 SIIVWAPDPTTGLWLETARV----------------------------------------------GEVGGNTLGFYGCK  143 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~v~~~~  143 (312)
                      .+.+|++.......+..+..                                              ....+..+.+.+..
T Consensus        78 ~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~  157 (323)
T KOG0322|consen   78 LLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQD  157 (323)
T ss_pred             eEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeee
Confidence            99999887522111110000                                              00011223444444


Q ss_pred             ECC-CCC--eEEEeecCCeEEE-ecccCcee----------eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        144 FGP-RGD--YIIAHGFQGSLHL-DVTTWKQI----------QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       144 ~~~-~~~--~l~~~~~~~~i~~-d~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      +.. ++.  ++++|.++|.+.+ |+.+.+..          .....|..+|.++.+.+.-..=++++.+..+..|.+...
T Consensus       158 ~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s  237 (323)
T KOG0322|consen  158 KDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHS  237 (323)
T ss_pred             ccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccc
Confidence            322 233  4667888999988 66554322          223379999999999986666678888889999998754


Q ss_pred             CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                      .....+......   ....|..+..-||++.+|+++.|+.||||..++..            ++..+..|...|++++|+
T Consensus       238 ~gslq~~~e~~l---knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~------------pLAVLkyHsagvn~vAfs  302 (323)
T KOG0322|consen  238 TGSLQIRKEITL---KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN------------PLAVLKYHSAGVNAVAFS  302 (323)
T ss_pred             cCcccccceEEe---cCCCccceEEccCCcEEeecccCCcEEEEEeccCC------------chhhhhhhhcceeEEEeC
Confidence            222111111110   33457889999999999999999999999998874            788899999999999999


Q ss_pred             cCCCeEEEEecCCCcccceEEeC
Q psy15191        290 HDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       290 ~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+..++|++|.|.+     |.+|
T Consensus       303 pd~~lmAaaskD~r-----ISLW  320 (323)
T KOG0322|consen  303 PDCELMAAASKDAR-----ISLW  320 (323)
T ss_pred             CCCchhhhccCCce-----EEee
Confidence            99999999955555     9999

>KOG4378|consensus

Probab=99.88  E-value=5.8e-21  Score=150.97  Aligned_cols=203  Identities=15%  Similarity=0.164  Sum_probs=159.9

Q ss_pred             CceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      ..++++|+..+.|+|||++...+        -.+.++.+.....+|++++..|.|.+..+.+......  +.    .+..
T Consensus        91 S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~--f~----~~sg  164 (673)
T KOG4378|consen   91 SLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT--FT----IDSG  164 (673)
T ss_pred             ceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc--ee----cCCC
Confidence            57899999999999999985443        2455555666777999999999999999887432211  11    1234


Q ss_pred             cceeEEEECCCCCe-EEEeecCCeEEE-ecccCceeee-ecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeE
Q psy15191        137 LGFYGCKFGPRGDY-IIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRL  212 (312)
Q Consensus       137 ~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~  212 (312)
                      ..|.-+.|+|..++ |.+++.+|.|.+ |+........ ...|..+...++|+| +..+|++.+.|..|.+||.+.....
T Consensus       165 qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~  244 (673)
T KOG4378|consen  165 QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST  244 (673)
T ss_pred             CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc
Confidence            55678999998776 557889999999 3333333222 237999999999999 6678889999999999999976666


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                      ..+.        ...+.+.++|.++|.+|+.|+..|.|..||++..+.           ++..+..|...|++++|-|..
T Consensus       245 ~~l~--------y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~-----------Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  245 DRLT--------YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKA-----------PVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             ceee--------ecCCcceeeecCCceEEEeecCCceEEEEecccCCC-----------CceEeeecccceeEEEeeecc
Confidence            5555        566788999999999999999999999999988754           788899999999999998764

>KOG2096|consensus

Probab=99.88  E-value=4.2e-21  Score=143.80  Aligned_cols=200  Identities=19%  Similarity=0.154  Sum_probs=147.1

Q ss_pred             ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEEecccC
Q psy15191         89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHLDVTTW  167 (312)
Q Consensus        89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~d~~~~  167 (312)
                      .+..+.++++|..|++++.|+.|++|+++.-+...-..++...   .....+.++|.||.+-++... ....+++    +
T Consensus        88 ~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nv---e~dhpT~V~FapDc~s~vv~~~~g~~l~v----y  160 (420)
T KOG2096|consen   88 EVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNV---EYDHPTRVVFAPDCKSVVVSVKRGNKLCV----Y  160 (420)
T ss_pred             ceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccc---cCCCceEEEECCCcceEEEEEccCCEEEE----E
Confidence            5666778899999999999999999999874332221122111   122467889999988766554 4446777    3


Q ss_pred             ceeee-----------------ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeE
Q psy15191        168 KQIQT-----------------LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW  230 (312)
Q Consensus       168 ~~~~~-----------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~  230 (312)
                      ++...                 -+.|.-.+..+-...++.+|++++.|..|.+|+++ ++.+..+..       ....-+
T Consensus       161 k~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idt-------nq~~n~  232 (420)
T KOG2096|consen  161 KLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDT-------NQSSNY  232 (420)
T ss_pred             EeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecc-------cccccc
Confidence            32221                 11466677778787889999999999999999999 676666654       223345


Q ss_pred             EEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEE
Q psy15191        231 GVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAII  310 (312)
Q Consensus       231 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~  310 (312)
                      ..+.||+|+++++++.--.|++|.+-.......    +.-..+..+.||.+.|..++|||+...++|.|.||+     ++
T Consensus       233 ~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~f----qev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~-----wr  303 (420)
T KOG2096|consen  233 DAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTF----QEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGK-----WR  303 (420)
T ss_pred             ceeeCCCCcEEEEecCCCCceEEEEEeccCcch----hhhhhhheeccchhheeeeeeCCCcceeEEEecCCc-----EE
Confidence            678999999999999988999999865543221    111257789999999999999999999999966666     99


Q ss_pred             eC
Q psy15191        311 IW  312 (312)
Q Consensus       311 iW  312 (312)
                      ||
T Consensus       304 iw  305 (420)
T KOG2096|consen  304 IW  305 (420)
T ss_pred             Ee
Confidence            99

>KOG4283|consensus

Probab=99.88  E-value=3.6e-21  Score=142.68  Aligned_cols=203  Identities=21%  Similarity=0.249  Sum_probs=154.9

Q ss_pred             CCCceEEEEeCCCcEEEEcCCCCcce----e----eeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-eccc
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPDPTTGL----W----LETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTT  166 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~~~~~~----~----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~  166 (312)
                      ..+.++++|+.||.|.+||++.....    .    ..........+|...|.++.|-| |.-.+.+++.|..+++ |..+
T Consensus        54 tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnT  133 (397)
T KOG4283|consen   54 TEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNT  133 (397)
T ss_pred             ccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeeccc
Confidence            34669999999999999999864311    0    11112233457888999999999 6667888999999999 6666


Q ss_pred             CceeeeecccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EE
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FL  242 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~  242 (312)
                      -+....+. ..+.|.+-+++|-   -.++++|..|-.|++-|+.++.....+.+       |...|.++.|+|...+ |+
T Consensus       134 lQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsG-------Hr~~vlaV~Wsp~~e~vLa  205 (397)
T KOG4283|consen  134 LQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSG-------HRDGVLAVEWSPSSEWVLA  205 (397)
T ss_pred             ceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeecc-------ccCceEEEEeccCceeEEE
Confidence            55555555 6778888899983   34788888899999999999998888888       9999999999998875 67


Q ss_pred             EeccCCeEEEEecCCCCC-Cccccc--ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        243 TISRDGVCVVWGLGEPPT-EEDLVQ--NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|+.||.|++||++.... -..+.+  .+.-+.+..-..|.+.|++++|..+|.++++.+.|.+     +++|
T Consensus       206 tgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r-----~r~w  273 (397)
T KOG4283|consen  206 TGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDR-----IRVW  273 (397)
T ss_pred             ecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccc-----eEEe
Confidence            899999999999987521 111111  1111233335578899999999999999999977777     9998

>KOG1273|consensus

Probab=99.88  E-value=2.4e-20  Score=139.54  Aligned_cols=234  Identities=13%  Similarity=0.140  Sum_probs=165.4

Q ss_pred             EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcc
Q psy15191         50 VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG  121 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  121 (312)
                      ..|+.|++.      |.+||.|..||.|.|||+.+...        ..+....++++|..|++++.|..|.+||+..+. 
T Consensus        26 a~~~~Fs~~------G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs-   98 (405)
T KOG1273|consen   26 AECCQFSRW------GDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS-   98 (405)
T ss_pred             cceEEeccC------cceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC-
Confidence            789999999      99999999999999999988664        456777889999999999999999999999855 


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCe--EEEeecCCeEEEecccCceeeeec------ccCCceeEEEECCCCCEEE
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDY--IIAHGFQGSLHLDVTTWKQIQTLP------CHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~~~~i~~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~  193 (312)
                       ++..++      ...+|+.+.|+|....  +++--....+.++...  ..+...      ..+....+..|.+.|++++
T Consensus        99 -~l~rir------f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~--~~h~~Lp~d~d~dln~sas~~~fdr~g~yIi  169 (405)
T KOG1273|consen   99 -PLKRIR------FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSD--PKHSVLPKDDDGDLNSSASHGVFDRRGKYII  169 (405)
T ss_pred             -ceeEEE------ccCccceeeeccccCCeEEEEEecCCcEEEEecC--CceeeccCCCccccccccccccccCCCCEEE
Confidence             344433      3577999999995443  3333333333332222  122111      1112223346889999999


Q ss_pred             EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccccee
Q psy15191        194 SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV  273 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  273 (312)
                      +|...|.+.++|..+.+.+..++..      ....|..+.++..|+.|+.-+.|..||.|++..-.....-   ..-++.
T Consensus       170 tGtsKGkllv~~a~t~e~vas~rit------s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~---~e~e~~  240 (405)
T KOG1273|consen  170 TGTSKGKLLVYDAETLECVASFRIT------SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRD---GEVEPE  240 (405)
T ss_pred             EecCcceEEEEecchheeeeeeeec------hheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCcc---CCcChh
Confidence            9999999999999998877766652      2356888999999999999999999999998732211000   000011


Q ss_pred             EEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        274 QKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       274 ~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++++.  ....-..+.||.+|.|++.++    +.-..++||
T Consensus       241 ~K~qDvVNk~~Wk~ccfs~dgeYv~a~s----~~aHaLYIW  277 (405)
T KOG1273|consen  241 HKLQDVVNKLQWKKCCFSGDGEYVCAGS----ARAHALYIW  277 (405)
T ss_pred             HHHHHHHhhhhhhheeecCCccEEEecc----ccceeEEEE
Confidence            11111  123346788999999999887    345678888

>KOG2919|consensus

Probab=99.88  E-value=9.2e-21  Score=142.18  Aligned_cols=238  Identities=15%  Similarity=0.122  Sum_probs=171.5

Q ss_pred             CcEEEEEEecCc-CcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEEEEeCCCcEEE
Q psy15191         48 SKVMAVKWVLNT-SLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        48 ~~v~~~~~~~~~-~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      ..|...+|-+.. +..|+..++|+.+.|.-|++||.-+++.             .....+.++++|.+|++|. .+.|++
T Consensus       105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirv  183 (406)
T KOG2919|consen  105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRV  183 (406)
T ss_pred             CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEE
Confidence            457777776432 2346678999999999999999999876             2445566788888877654 578999


Q ss_pred             EcCCCCccee-eeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        114 WAPDPTTGLW-LETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       114 ~d~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      +|+...-..+ ..........+..+-+.+++|+|- ...++.++....+-| .-....+...+-+|.+.|+.+.|.++|+
T Consensus       184 Fdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn  263 (406)
T KOG2919|consen  184 FDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGN  263 (406)
T ss_pred             eeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcC
Confidence            9994432222 111111112345677899999995 458889998888777 4444556666669999999999999999


Q ss_pred             EEEEEec-CCeEEEEEccCCCeE-EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        191 HLVSVSR-DRRWGLYKRQSSGRL-SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       191 ~l~~~~~-d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      .|++|+. |..|..||++..+.. ..+.....   .....| -....|++++|++|+.||.|++||+.....        
T Consensus       264 ~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~---~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~~gn--------  331 (406)
T KOG2919|consen  264 KLFSGARKDDKILCWDIRYSRDPVYALERHVG---DTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKDLGN--------  331 (406)
T ss_pred             eecccccCCCeEEEEeehhccchhhhhhhhcc---CccceE-EEecCCCCceeeccCCCccEEEEecCCCCC--------
Confidence            9999875 678999999965432 22222110   011122 245679999999999999999999988532        


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                         .+..+..|+..++.++++|--.++|+++..
T Consensus       332 ---~~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  332 ---EVSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ---cccccccccccccceecCcccceeeeccCc
Confidence               456677789999999999998889888653

>KOG1538|consensus

Probab=99.87  E-value=2e-20  Score=153.16  Aligned_cols=256  Identities=16%  Similarity=0.280  Sum_probs=189.6

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG   86 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~   86 (312)
                      .+-..++|..+....+.+--|    ||+..|.++.++++|.+.|++++|+.+      |+.+|+|+.|..|.+|+-....
T Consensus        17 d~afkPDGsqL~lAAg~rlli----yD~ndG~llqtLKgHKDtVycVAys~d------GkrFASG~aDK~VI~W~~klEG   86 (1081)
T KOG1538|consen   17 DIAFKPDGTQLILAAGSRLLV----YDTSDGTLLQPLKGHKDTVYCVAYAKD------GKRFASGSADKSVIIWTSKLEG   86 (1081)
T ss_pred             eeEECCCCceEEEecCCEEEE----EeCCCcccccccccccceEEEEEEccC------CceeccCCCceeEEEecccccc
Confidence            344455666665555544434    899999999999999999999999999      9999999999999999876554


Q ss_pred             cc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeE
Q psy15191         87 NY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL  160 (312)
Q Consensus        87 ~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i  160 (312)
                      .+      .+.++.++|-...+++++-.. .-+|......   +.+      ......+.+++|..||++++.|-.+|+|
T Consensus        87 ~LkYSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~~qK~---V~K------~kss~R~~~CsWtnDGqylalG~~nGTI  156 (1081)
T KOG1538|consen   87 ILKYSHNDAIQCMSFNPITHQLASCSLSD-FGLWSPEQKS---VSK------HKSSSRIICCSWTNDGQYLALGMFNGTI  156 (1081)
T ss_pred             eeeeccCCeeeEeecCchHHHhhhcchhh-ccccChhhhh---HHh------hhhheeEEEeeecCCCcEEEEeccCceE
Confidence            32      455666777777888887543 4577655321   111      1234568899999999999999999999


Q ss_pred             EEecccCceeeeec---ccCCceeEEEECCCC-----CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191        161 HLDVTTWKQIQTLP---CHQLTITQLAFSPDD-----THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       161 ~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~-----~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                      .+..++.+....+.   +.+.+|.+++|+|..     ..++......++.+|.+.. +.+..-.   .    ..-...++
T Consensus       157 siRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG-~~Igk~r---~----L~FdP~Ci  228 (1081)
T KOG1538|consen  157 SIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG-KQIGKDR---A----LNFDPCCI  228 (1081)
T ss_pred             EeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc-eeecccc---c----CCCCchhh
Confidence            99444444444433   577899999999953     4677777778888887763 2221111   0    22235578


Q ss_pred             EEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        233 AWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       233 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .+.|+|.|+..|+.|+.+.+|--..-             .+.++.....+|+.++..|++++++.|+.||+
T Consensus       229 sYf~NGEy~LiGGsdk~L~~fTR~Gv-------------rLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGT  286 (1081)
T KOG1538|consen  229 SYFTNGEYILLGGSDKQLSLFTRDGV-------------RLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGT  286 (1081)
T ss_pred             eeccCCcEEEEccCCCceEEEeecCe-------------EEeeccccceeEEEEEEccCCceEEEEEccCe
Confidence            89999999999999999999943322             56666667889999999999999999988876

>KOG4378|consensus

Probab=99.87  E-value=1.3e-20  Score=149.08  Aligned_cols=223  Identities=14%  Similarity=0.170  Sum_probs=167.3

Q ss_pred             cEEEEEEecCcCcCCCC-ceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         49 KVMAVKWVLNTSLDPEH-KDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~-~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      .+.++.|...      . -.+++.+.|..+++|.-.....          -...+........++++|+..+.|+|||++
T Consensus        36 g~~s~~w~~~------n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~  109 (673)
T KOG4378|consen   36 GDFSFNWQRR------NFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLR  109 (673)
T ss_pred             cceeeecccc------ceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhH
Confidence            3899999887      3 2345556788899997654311          012222233344689999999999999998


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc-CCceeEEEECCCCCE-EEE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH-QLTITQLAFSPDDTH-LVS  194 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-l~~  194 (312)
                      .  ..     ....+.+|...|+++.++-...+|++++..|.|.+ .+.+......+... ...|.-+.|+|..++ |.+
T Consensus       110 ~--kl-----~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~  182 (673)
T KOG4378|consen  110 A--KL-----IHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSI  182 (673)
T ss_pred             H--HH-----HhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEe
Confidence            4  22     22234589999999999999999999999999999 77766666666533 445678999997665 556


Q ss_pred             EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCccccccccccee
Q psy15191        195 VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV  273 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  273 (312)
                      ++.+|.|.+||+....++..+...      |..+...++|+|.. .+|++.+.|..|.+||+.....            .
T Consensus       183 asd~G~VtlwDv~g~sp~~~~~~~------HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s------------~  244 (673)
T KOG4378|consen  183 ASDKGAVTLWDVQGMSPIFHASEA------HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAS------------T  244 (673)
T ss_pred             eccCCeEEEEeccCCCcccchhhh------ccCCcCcceecCCccceEEEecccceEEEeecccccc------------c
Confidence            889999999999987776655443      88999999999965 5778999999999999986532            2


Q ss_pred             EEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        274 QKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       274 ~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ..+ ..+.+...++|+++|.+|+.|+..|.
T Consensus       245 ~~l-~y~~Plstvaf~~~G~~L~aG~s~G~  273 (673)
T KOG4378|consen  245 DRL-TYSHPLSTVAFSECGTYLCAGNSKGE  273 (673)
T ss_pred             cee-eecCCcceeeecCCceEEEeecCCce
Confidence            222 23567899999999999999976665

>KOG2048|consensus

Probab=99.87  E-value=3.1e-19  Score=145.99  Aligned_cols=242  Identities=12%  Similarity=0.182  Sum_probs=184.6

Q ss_pred             EeCCCCc-eEEEEccc-cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCce
Q psy15191         32 WNGEGGK-VLYTLTNH-KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~-~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~  101 (312)
                      |++...- +...+.++ ...|.+++|++.       ..|++.+.+|.|.-||+.+.+..        .+.....++.+..
T Consensus        52 wN~~~~w~~~~vi~g~~drsIE~L~W~e~-------~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~  124 (691)
T KOG2048|consen   52 WNLSNNWFLEPVIHGPEDRSIESLAWAEG-------GRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTI  124 (691)
T ss_pred             EccCCCceeeEEEecCCCCceeeEEEccC-------CeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccce
Confidence            6654432 33455555 467999999854       67999999999999999988762        3444455677789


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec------
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP------  174 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~------  174 (312)
                      ++.|+.||.+..++...++......+     ....+++.+++|+|++..++.|+.||.|++ |..+.+......      
T Consensus       125 l~IgcddGvl~~~s~~p~~I~~~r~l-----~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l  199 (691)
T KOG2048|consen  125 LAIGCDDGVLYDFSIGPDKITYKRSL-----MRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRL  199 (691)
T ss_pred             EEeecCCceEEEEecCCceEEEEeec-----ccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeeccccc
Confidence            99999999888888776543332222     245688999999999999999999999999 555555444111      


Q ss_pred             --ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191        175 --CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV  252 (312)
Q Consensus       175 --~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  252 (312)
                        ....-|.++.|-.++ .|++|..-|+|.+||...+..++....       |...|.+++.++++.++++++.|+.|.-
T Consensus       200 ~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~-------h~adVl~Lav~~~~d~vfsaGvd~~ii~  271 (691)
T KOG2048|consen  200 SKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSC-------HDADVLALAVADNEDRVFSAGVDPKIIQ  271 (691)
T ss_pred             ccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhh-------hhcceeEEEEcCCCCeEEEccCCCceEE
Confidence              123346777777555 689999999999999998888877776       8889999999999999999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      |.......        .|........|...|.+++..++  .|++|+.|..
T Consensus       272 ~~~~~~~~--------~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~  312 (691)
T KOG2048|consen  272 YSLTTNKS--------EWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFT  312 (691)
T ss_pred             EEecCCcc--------ceeeeccccCCcccceeeeeecc--eEEecceeeE
Confidence            98877643        25556666788999999999887  8888854443

>KOG1188|consensus

Probab=99.87  E-value=2.1e-20  Score=141.15  Aligned_cols=261  Identities=13%  Similarity=0.224  Sum_probs=174.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc-----------ccCCCCCc
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH-----------MRDDSKQL  100 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-----------~~~~~~~~  100 (312)
                      +++.+++.+..+++|...++.++|..+    .....+.+|+.||+|++||++.........           ........
T Consensus        55 yd~~tg~~l~~fk~~~~~~N~vrf~~~----ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~  130 (376)
T KOG1188|consen   55 YDKGTGQLLEEFKGPPATTNGVRFISC----DSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKN  130 (376)
T ss_pred             EeccchhhhheecCCCCcccceEEecC----CCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCC
Confidence            677779999999999999999999885    225689999999999999998876522111           11122334


Q ss_pred             eEEEEe----CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceee---
Q psy15191        101 HLLSCS----MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQ---  171 (312)
Q Consensus       101 ~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~---  171 (312)
                      .+++|.    .+-.|.+||++..+..     ...-...|...|++++|+| +.+.|++|+.||.+.+ |++.-+-..   
T Consensus       131 ii~~GtE~~~s~A~v~lwDvR~~qq~-----l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~  205 (376)
T KOG1188|consen  131 IIACGTELTRSDASVVLWDVRSEQQL-----LRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALL  205 (376)
T ss_pred             eEEeccccccCceEEEEEEeccccch-----hhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHH
Confidence            455543    4577999999975432     1112247889999999999 5678999999999999 554432211   


Q ss_pred             eecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-----cceeeEEEEEcCCCceEEEec
Q psy15191        172 TLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-----HKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      ..-.|...|..+.|..++ +.+.+-+......+|++..+.....+..+......     ....+-......+...++.++
T Consensus       206 ~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g  285 (376)
T KOG1188|consen  206 HVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAG  285 (376)
T ss_pred             HhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEec
Confidence            112577889999999876 45888889999999999987654433332111100     111121211122444555554


Q ss_pred             c-CCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        246 R-DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      . -|+..++-+....+..      ..+.+..+.+ |..-|+++.|...+.++.||     +|||.+.+|
T Consensus       286 ~~~n~~~~~~~~~~~s~~------~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TG-----GEDG~l~~W  343 (376)
T KOG1188|consen  286 TDSNKGTIFPLVDTSSGS------LLTEPAILQGGHEEIVRDILFDVKNDVLYTG-----GEDGLLQAW  343 (376)
T ss_pred             cccCceeEEEeeeccccc------ccCccccccCCcHHHHHHHhhhcccceeecc-----CCCceEEEE
Confidence            4 5666666554321111      1124566666 77889999999999999999     778889998

>KOG0302|consensus

Probab=99.87  E-value=2.7e-20  Score=142.25  Aligned_cols=191  Identities=19%  Similarity=0.296  Sum_probs=133.5

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCce--eeeeccc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQ--IQTLPCH  176 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~--~~~~~~~  176 (312)
                      .+++|.--+.|++|...+  +.+..  ....+.+|...|..++|+|. ...|++|+.||.|+| |++....  ....++|
T Consensus       226 ~LlsGDc~~~I~lw~~~~--g~W~v--d~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh  301 (440)
T KOG0302|consen  226 RLLSGDCVKGIHLWEPST--GSWKV--DQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAH  301 (440)
T ss_pred             ccccCccccceEeeeecc--Cceee--cCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeecc
Confidence            466666667777777666  33322  22344579999999999995 457889999999999 5554411  1123489


Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccCCC---eEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEE
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG---RLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVV  252 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~i  252 (312)
                      .+.|+.|.|+.+..+|++|+.||+++|||++..+   ++..++.       |..+|+++.|+|.. ..|++++.|..|.|
T Consensus       302 ~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~-------Hk~pItsieW~p~e~s~iaasg~D~Qiti  374 (440)
T KOG0302|consen  302 NSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKY-------HKAPITSIEWHPHEDSVIAASGEDNQITI  374 (440)
T ss_pred             CCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEe-------ccCCeeEEEeccccCceEEeccCCCcEEE
Confidence            9999999999988899999999999999999643   3444444       99999999999964 57888889999999


Q ss_pred             EecCCCCCCcccccccccc----eeEEeecc--CcceeEEEeccCC-CeEEEEecCC
Q psy15191        253 WGLGEPPTEEDLVQNTLWP----EVQKLYGH--GYEIYSLAASHDG-TLLASACKAT  302 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~v~~~~~s~~~-~~l~s~s~d~  302 (312)
                      ||+......+...+...-.    +-+.+.-|  ...+..+.|++.- -+|++.+.||
T Consensus       375 WDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG  431 (440)
T KOG0302|consen  375 WDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG  431 (440)
T ss_pred             EEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc
Confidence            9997665422211100000    11122224  4568899999864 4777775554

>KOG1587|consensus

Probab=99.86  E-value=1.2e-19  Score=151.57  Aligned_cols=255  Identities=18%  Similarity=0.215  Sum_probs=177.0

Q ss_pred             EEEEeCCCC-ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------ccc
Q psy15191         29 AVKWNGEGG-KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------YLP   90 (312)
Q Consensus        29 ~~~w~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------~~~   90 (312)
                      .+.|+.... .+...+. -..+|+++.|+|.     +..+++.|..+|.|.+||+..+..                 ..+
T Consensus       224 ~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~-----~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~v  297 (555)
T KOG1587|consen  224 LLVWSLKNPNTPELVLE-SPSEVTCLKFCPF-----DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAV  297 (555)
T ss_pred             EEEEecCCCCCceEEEe-cCCceeEEEeccC-----CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEE
Confidence            344776554 4444444 4678999999997     456899999999999999987665                 123


Q ss_pred             ccccCCCCCceEEEEeCCCcEEEEcCCCCcceee----eeee-ecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-e
Q psy15191         91 YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWL----ETAR-VGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-D  163 (312)
Q Consensus        91 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d  163 (312)
                      .+.....+ .-+++++.||.|..|+++.-.....    .... ...-......+++++|.+ +...+++|++.|.|.- .
T Consensus       298 vW~~~~~~-~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~  376 (555)
T KOG1587|consen  298 VWLQNEHN-TEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGC  376 (555)
T ss_pred             EEeccCCC-CceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEe
Confidence            33332222 5699999999999998875322110    0000 000112345688899988 5567999999999887 3


Q ss_pred             cccCce--------eeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc-CCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        164 VTTWKQ--------IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       164 ~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                      ....+.        ......|.++|+.+.++|=+..++..+.|.+++||... ...++..+..       +...|++++|
T Consensus       377 r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~-------~~~~v~~vaW  449 (555)
T KOG1587|consen  377 RKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDS-------SPDYVTDVAW  449 (555)
T ss_pred             ccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhh-------ccceeeeeEE
Confidence            332222        22344789999999999966655555559999999987 5555544443       5666999999


Q ss_pred             cCCC-ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        235 SHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       235 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ||-. ..++++..||.|.+||+......          ++....-+....+.+.|++.|+.|+.|     .+.|.|.+|
T Consensus       450 SptrpavF~~~d~~G~l~iWDLl~~~~~----------Pv~s~~~~~~~l~~~~~s~~g~~lavG-----d~~G~~~~~  513 (555)
T KOG1587|consen  450 SPTRPAVFATVDGDGNLDIWDLLQDDEE----------PVLSQKVCSPALTRVRWSPNGKLLAVG-----DANGTTHIL  513 (555)
T ss_pred             cCcCceEEEEEcCCCceehhhhhccccC----------CcccccccccccceeecCCCCcEEEEe-----cCCCcEEEE
Confidence            9965 46778888999999999876432          444444456677888999999999999     555558775

>KOG1034|consensus

Probab=99.86  E-value=7.7e-21  Score=142.79  Aligned_cols=260  Identities=15%  Similarity=0.199  Sum_probs=162.1

Q ss_pred             EeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc
Q psy15191          9 VNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY   88 (312)
Q Consensus         9 ~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~   88 (312)
                      ++.+++.++..+.|-.+.|.-  .|+.++++...+.+|..+|+.+.|.|.     +.++++++|.|..|++|++++..++
T Consensus        99 yd~~~~~p~la~~G~~GvIrV--id~~~~~~~~~~~ghG~sINeik~~p~-----~~qlvls~SkD~svRlwnI~~~~Cv  171 (385)
T KOG1034|consen   99 YDSNTGNPFLAAGGYLGVIRV--IDVVSGQCSKNYRGHGGSINEIKFHPD-----RPQLVLSASKDHSVRLWNIQTDVCV  171 (385)
T ss_pred             ecCCCCCeeEEeecceeEEEE--EecchhhhccceeccCccchhhhcCCC-----CCcEEEEecCCceEEEEeccCCeEE
Confidence            344556666666664444433  466778888899999999999999998     3468999999999999999987763


Q ss_pred             -----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC
Q psy15191         89 -----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ  157 (312)
Q Consensus        89 -----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~  157 (312)
                                 .+....++.++.++++++.|..|++|++...+      ++     .+-  =.+..|+|++...-.-  .
T Consensus       172 ~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~------f~-----~~l--E~s~~~~~~~t~~pfp--t  236 (385)
T KOG1034|consen  172 AVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKE------FK-----NKL--ELSITYSPNKTTRPFP--T  236 (385)
T ss_pred             EEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhH------Hh-----hhh--hhhcccCCCCccCcCC--c
Confidence                       23334445566666666666666666665421      00     000  1123444444321100  0


Q ss_pred             CeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc-CCCeEEEEeccCCCC------cccceeeE
Q psy15191        158 GSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTN------GVHKRIIW  230 (312)
Q Consensus       158 ~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~------~~~~~~v~  230 (312)
                      -...+    .+.. +..-|...|.|+.|-  |+++++-+-++.|..|..- -.+.+..+..+....      ......|+
T Consensus       237 ~~~~f----p~fs-t~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iW  309 (385)
T KOG1034|consen  237 PKTHF----PDFS-TTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIW  309 (385)
T ss_pred             ccccc----cccc-ccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceE
Confidence            00111    0000 112477788888885  6889999999999999872 222222121111100      00223344


Q ss_pred             E--EEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee--ccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191        231 G--VAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY--GHGYEIYSLAASHDGTLLASACKATKPEH  306 (312)
Q Consensus       231 ~--~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~~~~d  306 (312)
                      -  .+|.|-++.||.|...|.|++||++...+..          ..++.  .....|...+||.||.+|+..+.|++   
T Consensus       310 firf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~----------~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~---  376 (385)
T KOG1034|consen  310 FIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPK----------CTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGT---  376 (385)
T ss_pred             EEEEeecHHHHHHhhccCCCcEEEEECCCCCCcc----------CceEEeccccceeeeeeecccCcEEEEEeCCCc---
Confidence            3  4567888999999999999999998775431          11121  23467999999999999999966665   


Q ss_pred             ceEEeC
Q psy15191        307 AAIIIW  312 (312)
Q Consensus       307 g~i~iW  312 (312)
                        |.-|
T Consensus       377 --Vwrw  380 (385)
T KOG1034|consen  377 --VWRW  380 (385)
T ss_pred             --EEEE
Confidence              7655

>KOG0321|consensus

Probab=99.86  E-value=4.3e-20  Score=150.06  Aligned_cols=235  Identities=16%  Similarity=0.117  Sum_probs=162.4

Q ss_pred             EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191         51 MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAP  116 (312)
Q Consensus        51 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  116 (312)
                      .+..|++.   ......|+.+..||.|.++|......              ..++-..+-+....|++++.|.++++||+
T Consensus        53 f~~sFs~~---~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdv  129 (720)
T KOG0321|consen   53 FADSFSAA---PNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDV  129 (720)
T ss_pred             ccccccCC---CCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeee
Confidence            34667665   22356789999999999999765322              12333444556668999999999999999


Q ss_pred             CCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEEecccCceeeeec---------------------
Q psy15191        117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHLDVTTWKQIQTLP---------------------  174 (312)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~d~~~~~~~~~~~---------------------  174 (312)
                      ++.+..-..     ...+|...+.+++|.|. ...+++|+.||.+.|    |++.....                     
T Consensus       130 k~s~l~G~~-----~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~ill----WD~R~n~~d~~e~~~~~~~~~~n~~ptps  200 (720)
T KOG0321|consen  130 KTSRLVGGR-----LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILL----WDCRCNGVDALEEFDNRIYGRHNTAPTPS  200 (720)
T ss_pred             ccceeecce-----eecccccccchhhhccCCCcceeeccCCCcEEE----EEEeccchhhHHHHhhhhhccccCCCCCC
Confidence            985533222     23489999999999995 456889999999999    55443220                     


Q ss_pred             -----------ccCCceeE---EEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCC-CCccc---ceeeEEEEEc
Q psy15191        175 -----------CHQLTITQ---LAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDK-TNGVH---KRIIWGVAWS  235 (312)
Q Consensus       175 -----------~~~~~v~~---~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~-~~~~~---~~~v~~~~~~  235 (312)
                                 .+...|.+   +.+..|...|++++. |+.|++||++............. ....+   ...+.++...
T Consensus       201 kp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lD  280 (720)
T KOG0321|consen  201 KPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILD  280 (720)
T ss_pred             chhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEec
Confidence                       33344444   555578899999887 99999999998665433222111 11112   4567788888


Q ss_pred             CCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcc--eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        236 HDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE--IYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       236 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..|.+|.+.+.|+.|++|++......          ++..+.++...  -..-..+|++.+|++|+.|..     .++|
T Consensus       281 ssGt~L~AsCtD~sIy~ynm~s~s~s----------P~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~-----ayiw  344 (720)
T KOG0321|consen  281 SSGTYLFASCTDNSIYFYNMRSLSIS----------PVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQ-----AYIW  344 (720)
T ss_pred             CCCCeEEEEecCCcEEEEeccccCcC----------chhhccCcccceeeeeeecCCCCceEeccCCCcc-----eeee
Confidence            88899988888999999999876432          34444443221  112246899999999977766     8887

>KOG4227|consensus

Probab=99.86  E-value=9.3e-20  Score=140.42  Aligned_cols=255  Identities=15%  Similarity=0.159  Sum_probs=178.9

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC------cc---------cccccccCCCCCceEEEE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE------GN---------YLPYHMRDDSKQLHLLSC  105 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~------~~---------~~~~~~~~~~~~~~l~~~  105 (312)
                      +-+.+|.+.|+++.|+.+      +++|++|+.|..+++|+++..      +.         ..++++.+...+..+++|
T Consensus        50 KD~~~H~GCiNAlqFS~N------~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG  123 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHN------DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSG  123 (609)
T ss_pred             hhhhhhccccceeeeccC------CeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecC
Confidence            346789999999999998      999999999999999997542      11         356677777788899999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc-eeeee--cccCCcee
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTL--PCHQLTIT  181 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~--~~~~~~v~  181 (312)
                      ..+++|..-|+++.+...+...     ....+.|+.+..+|..+.+++.+.++.|.+ |.+.-. ....+  ........
T Consensus       124 ~~~~~VI~HDiEt~qsi~V~~~-----~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~  198 (609)
T KOG4227|consen  124 ERWGTVIKHDIETKQSIYVANE-----NNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFY  198 (609)
T ss_pred             CCcceeEeeecccceeeeeecc-----cCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccce
Confidence            9999999999998654433322     245568999999999999999999999999 333222 11111  13345567


Q ss_pred             EEEECCC-CCEEEEEecCCeEEEEEccCCCe------------------------------------------------E
Q psy15191        182 QLAFSPD-DTHLVSVSRDRRWGLYKRQSSGR------------------------------------------------L  212 (312)
Q Consensus       182 ~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~------------------------------------------------~  212 (312)
                      ++.|+|. ..+|++.+..+-+.+||.+....                                                +
T Consensus       199 t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~  278 (609)
T KOG4227|consen  199 TAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRC  278 (609)
T ss_pred             eeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccc
Confidence            8889984 55777888888899999886211                                                0


Q ss_pred             EEEeccCCC-CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc-----------cccceeEEeeccC
Q psy15191        213 SLVACSDKT-NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN-----------TLWPEVQKLYGHG  280 (312)
Q Consensus       213 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~  280 (312)
                      ..++..... .......+.+++|..|. -+++|+.+-.|++|.+........+.+.           -.-+.+..+.||.
T Consensus       279 ~V~k~D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHR  357 (609)
T KOG4227|consen  279 FVLKSDHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHR  357 (609)
T ss_pred             eeEeccCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEeccc
Confidence            011110000 00022345566665443 3889999999999998755433221110           0112567789999


Q ss_pred             cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       281 ~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +-++.+.|+|...+|++.+..+.     ++||
T Consensus       358 Sv~NQVRF~~H~~~l~SSGVE~~-----~KlW  384 (609)
T KOG4227|consen  358 SVPNQVRFSQHNNLLVSSGVENS-----FKLW  384 (609)
T ss_pred             ccccceeecCCcceEeccchhhh-----eecc
Confidence            99999999999999999965555     9999

>KOG1009|consensus

Probab=99.84  E-value=2.8e-19  Score=137.96  Aligned_cols=156  Identities=18%  Similarity=0.222  Sum_probs=123.7

Q ss_pred             cCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc-----------------cccccccCCCCCceEEEEeCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN-----------------YLPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~d  108 (312)
                      ..+|.++.|.+.      .. .||||+.|..|++|.+.....                 ..+..+.+++++..+++|+.+
T Consensus        13 ~~pv~s~dfq~n------~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~   86 (434)
T KOG1009|consen   13 HEPVYSVDFQKN------SLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDG   86 (434)
T ss_pred             CCceEEEEeccC------cccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCC
Confidence            367889988887      33 899999999999998866543                 245556678899999999999


Q ss_pred             CcEEEEcCCCC------c-ce--eeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCC
Q psy15191        109 KSIIVWAPDPT------T-GL--WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL  178 (312)
Q Consensus       109 ~~i~i~d~~~~------~-~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~  178 (312)
                      |.|.+|....-      + ..  ...-.......+|...++.++|+|++.++++++-|..+++ |+..|.+...+..|..
T Consensus        87 g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~  166 (434)
T KOG1009|consen   87 GEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH  166 (434)
T ss_pred             ceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc
Confidence            99999976610      0 00  0001112234568899999999999999999999999999 9999999999999999


Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      .+..++|.|-++++++-+.|...+.+.+..
T Consensus       167 yvqgvawDpl~qyv~s~s~dr~~~~~~~~~  196 (434)
T KOG1009|consen  167 YVQGVAWDPLNQYVASKSSDRHPEGFSAKL  196 (434)
T ss_pred             ccceeecchhhhhhhhhccCcccceeeeee
Confidence            999999999999999888888666666554

>KOG1445|consensus

Probab=99.84  E-value=9.4e-20  Score=148.45  Aligned_cols=115  Identities=15%  Similarity=0.201  Sum_probs=90.9

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------------cccccccCCCCCceEEE
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------------YLPYHMRDDSKQLHLLS  104 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~  104 (312)
                      .+..+.+|.+.|+.+.|+|-    . ..+||||+.|..|+||.+..+..              ..+.+..+++...-|+.
T Consensus        71 ~i~~l~~H~d~VtDl~FspF----~-D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~  145 (1012)
T KOG1445|consen   71 DIGILAAHGDQVTDLGFSPF----A-DELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILA  145 (1012)
T ss_pred             ccceeecccceeeccCcccc----c-hhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEE
Confidence            45667889999999999996    3 35899999999999999874332              23444455665556777


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT  165 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~  165 (312)
                      .+..|.+++||+.+.+.       ..+..+|...|.++.|+.||..|++.+.|..|+| |.+
T Consensus       146 s~a~g~v~i~D~stqk~-------~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR  200 (1012)
T KOG1445|consen  146 SGAHGSVYITDISTQKT-------AVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR  200 (1012)
T ss_pred             eccCceEEEEEcccCce-------eecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence            77889999999998542       2234578889999999999999999999999999 554

>KOG0322|consensus

Probab=99.84  E-value=9.1e-20  Score=133.17  Aligned_cols=226  Identities=16%  Similarity=0.224  Sum_probs=162.2

Q ss_pred             EEEEeccCCCceEEEE------------------EeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191         16 VLYTLTNHKSKVMAVK------------------WNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT   76 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~------------------w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~   76 (312)
                      +.+.+++|...|+++.                  |+.++.+....++ .|...|+.+.-.|+       ..|.+-++|+.
T Consensus         6 P~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-------d~l~tqgRd~~   78 (323)
T KOG0322|consen    6 PFFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-------DSLDTQGRDPL   78 (323)
T ss_pred             CeeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-------cchhhcCCCce
Confidence            4556667777777776                  6666677777777 56778888888775       46888899999


Q ss_pred             EEEeeecCCccc-------------------------------------------------------------cccccc-
Q psy15191         77 AILWKYVSEGNY-------------------------------------------------------------LPYHMR-   94 (312)
Q Consensus        77 i~vw~~~~~~~~-------------------------------------------------------------~~~~~~-   94 (312)
                      +.+|++......                                                             .+++.. 
T Consensus        79 L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~  158 (323)
T KOG0322|consen   79 LILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDK  158 (323)
T ss_pred             EEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeec
Confidence            999998663210                                                             000000 


Q ss_pred             --CCCCCceEEEEeCCCcEEEEcCCCCcceeeee---eeecccCCCccceeEEEECCCCCeEEEeecCCeEEE---e--c
Q psy15191         95 --DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLET---ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---D--V  164 (312)
Q Consensus        95 --~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d--~  164 (312)
                        .....-++++|.++|.+.+||+.++.......   ........|..+|.++.+.+.-..=++|+.+..+..   +  .
T Consensus       159 ~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~  238 (323)
T KOG0322|consen  159 DHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST  238 (323)
T ss_pred             cccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc
Confidence              01111257888999999999999852211100   111233468889999999876666666666655555   1  1


Q ss_pred             ccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       165 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                      .+........-.+..|..+..-||++.++|++.|+.||+|..++..++..++.       |...|++++|+|+..++|++
T Consensus       239 gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky-------Hsagvn~vAfspd~~lmAaa  311 (323)
T KOG0322|consen  239 GSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY-------HSAGVNAVAFSPDCELMAAA  311 (323)
T ss_pred             CcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh-------hhcceeEEEeCCCCchhhhc
Confidence            12222333333445688899999999999999999999999999999988876       89999999999999999999


Q ss_pred             ccCCeEEEEec
Q psy15191        245 SRDGVCVVWGL  255 (312)
Q Consensus       245 ~~dg~i~iwd~  255 (312)
                      +.|+.|.+|++
T Consensus       312 skD~rISLWkL  322 (323)
T KOG0322|consen  312 SKDARISLWKL  322 (323)
T ss_pred             cCCceEEeeec
Confidence            99999999986

>KOG0642|consensus

Probab=99.84  E-value=1.7e-19  Score=144.68  Aligned_cols=201  Identities=15%  Similarity=0.175  Sum_probs=153.9

Q ss_pred             cccccCCCCCceEEEEeCCCcEEEEcCCCCc-ceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCc
Q psy15191         90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT-GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWK  168 (312)
Q Consensus        90 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~  168 (312)
                      +...++++....|++++.||.|++|++.... .......++..+.+|.++|.|+++.+++..+++|+.||.|+.    |+
T Consensus       297 ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~----w~  372 (577)
T KOG0642|consen  297 IRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRC----WN  372 (577)
T ss_pred             hhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeee----ec
Confidence            3334445555688999999999999883311 112233445566799999999999999999999999999999    63


Q ss_pred             ---------------eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC-------------
Q psy15191        169 ---------------QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK-------------  220 (312)
Q Consensus       169 ---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-------------  220 (312)
                                     +...+.+|.+.+..+++|+....|++++.||++++|+...... ..+.....             
T Consensus       373 ~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~  451 (577)
T KOG0642|consen  373 LPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSR  451 (577)
T ss_pred             cCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccch
Confidence                           2334559999999999999999999999999999999765333 11110000             


Q ss_pred             --------------------------------CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        221 --------------------------------TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       221 --------------------------------~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                                                      ........+..+.++|.+.+.+++-.|+.|+++|..++.         
T Consensus       452 ~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~---------  522 (577)
T KOG0642|consen  452 PAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGK---------  522 (577)
T ss_pred             hHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccc---------
Confidence                                            000022456778899999999999999999999988874         


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                         ++.....|...++++++.|+|-+|++++.|+.     |++|
T Consensus       523 ---~l~s~~a~~~svtslai~~ng~~l~s~s~d~s-----v~l~  558 (577)
T KOG0642|consen  523 ---ILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGS-----VRLW  558 (577)
T ss_pred             ---cchheeeccceecceeecCCCceEEeecCCce-----eehh
Confidence               67778889999999999999999999965555     9988

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.83  E-value=6e-17  Score=131.85  Aligned_cols=272  Identities=11%  Similarity=0.136  Sum_probs=167.8

Q ss_pred             eEEEEeccCCCceEEEEEeCCCC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEe-cCCCcEEEeeecC-Ccc---
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGEGG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSC-SLDKTAILWKYVS-EGN---   87 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vw~~~~-~~~---   87 (312)
                      +.+++...+.+.|..+..+. ++  +.+.++. +.+....++++|+      +++|+.+ ..++.|.+|+++. +..   
T Consensus         2 ~~~y~~~~~~~~I~~~~~~~-~g~l~~~~~~~-~~~~~~~l~~spd------~~~lyv~~~~~~~i~~~~~~~~g~l~~~   73 (330)
T PRK11028          2 QIVYIASPESQQIHVWNLNH-EGALTLLQVVD-VPGQVQPMVISPD------KRHLYVGVRPEFRVLSYRIADDGALTFA   73 (330)
T ss_pred             eEEEEEcCCCCCEEEEEECC-CCceeeeeEEe-cCCCCccEEECCC------CCEEEEEECCCCcEEEEEECCCCceEEe
Confidence            34566666777776655532 23  3556665 3456778899988      8887665 4578999999973 222   


Q ss_pred             ------cccccccCCCCCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCe
Q psy15191         88 ------YLPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGS  159 (312)
Q Consensus        88 ------~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~  159 (312)
                            .....+..++++.++++++ .++.|.+|++++..... ....  .. .....+..++++|++++++++. .++.
T Consensus        74 ~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~-~~~~--~~-~~~~~~~~~~~~p~g~~l~v~~~~~~~  149 (330)
T PRK11028         74 AESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPV-APIQ--II-EGLEGCHSANIDPDNRTLWVPCLKEDR  149 (330)
T ss_pred             eeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCC-Ccee--ec-cCCCcccEeEeCCCCCEEEEeeCCCCE
Confidence                  1223444567787777765 47899999987422110 1111  11 1223467789999999886555 5688


Q ss_pred             EEE-ecccCceeee-----ec-ccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCC--Ce--EEEEeccCCCCcccce
Q psy15191        160 LHL-DVTTWKQIQT-----LP-CHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSS--GR--LSLVACSDKTNGVHKR  227 (312)
Q Consensus       160 i~~-d~~~~~~~~~-----~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~--~~--~~~~~~~~~~~~~~~~  227 (312)
                      |.+ |+.+......     .. ........++|+|++++++++.. ++.|.+||+...  ..  ...+..... ......
T Consensus       150 v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~-~~~~~~  228 (330)
T PRK11028        150 IRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPA-DFSDTR  228 (330)
T ss_pred             EEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCC-cCCCCc
Confidence            988 6554221110     01 12334678999999999988876 899999999742  21  222211100 001222


Q ss_pred             eeEEEEEcCCCceEEEecc-CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191        228 IIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEH  306 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~d  306 (312)
                      ....+.++|++++|+++.. ++.|.+|++.......        +.+..... ......++++|+|++|++++.    .+
T Consensus       229 ~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~--------~~~~~~~~-~~~p~~~~~~~dg~~l~va~~----~~  295 (330)
T PRK11028        229 WAADIHITPDGRHLYACDRTASLISVFSVSEDGSVL--------SFEGHQPT-ETQPRGFNIDHSGKYLIAAGQ----KS  295 (330)
T ss_pred             cceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeE--------EEeEEEec-cccCCceEECCCCCEEEEEEc----cC
Confidence            3446899999999988864 7899999996542110        12222221 234568999999999998863    35


Q ss_pred             ceEEeC
Q psy15191        307 AAIIIW  312 (312)
Q Consensus       307 g~i~iW  312 (312)
                      ++|.+|
T Consensus       296 ~~v~v~  301 (330)
T PRK11028        296 HHISVY  301 (330)
T ss_pred             CcEEEE
Confidence            558776

>KOG1517|consensus

Probab=99.83  E-value=1.9e-18  Score=148.30  Aligned_cols=257  Identities=16%  Similarity=0.160  Sum_probs=176.8

Q ss_pred             EEeCCCCceEEEEccc---cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c---c--------------
Q psy15191         31 KWNGEGGKVLYTLTNH---KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N---Y--------------   88 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~---~--------------   88 (312)
                      .|+.+.++.+..|..+   ...|+.+.+..+    .|..++++|+.||.|+||+--...  .   +              
T Consensus      1090 vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe----~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r 1165 (1387)
T KOG1517|consen 1090 VWDWEKGRLLNGFDNGAFPDTRVSDLELINE----QDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGAR 1165 (1387)
T ss_pred             EEecccCceeccccCCCCCCCccceeeeecc----cchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCC
Confidence            3888888888888754   357999999887    566789999999999999643221  1   0              


Q ss_pred             -ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecc
Q psy15191         89 -LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVT  165 (312)
Q Consensus        89 -~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~  165 (312)
                       .-....+.....+|++++.-..|+|||....  ......+    .+....++++.-+- .|+.+++|..||.+++ |.+
T Consensus      1166 ~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E--~~~~diP----~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R 1239 (1387)
T KOG1517|consen 1166 GTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKE--QVVADIP----YGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRR 1239 (1387)
T ss_pred             CCCeeeehhhhCCeEEecCCeeEEEEEecccc--eeEeecc----cCCCccceeecccccCCceEEEeecCCceEEeecc
Confidence             0122233444457777777899999999873  3333333    23455667666543 5799999999999999 665


Q ss_pred             cCce---eeeecccCCc--eeEEEECCCCCE-EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191        166 TWKQ---IQTLPCHQLT--ITQLAFSPDDTH-LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR  239 (312)
Q Consensus       166 ~~~~---~~~~~~~~~~--v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  239 (312)
                      .-..   +...+.|+..  |..+.+.++|-. |++|+.||.|++||++.......+.......  ..+.++++..+++..
T Consensus      1240 ~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~--yGs~lTal~VH~hap 1317 (1387)
T KOG1517|consen 1240 MAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE--YGSALTALTVHEHAP 1317 (1387)
T ss_pred             cCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccc--cCccceeeeeccCCC
Confidence            4432   3344567777  999999987654 9999999999999999753322222211000  123589999999999


Q ss_pred             eEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        240 YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       240 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+|+|+. +.|+||++.........       ....+. ...+.+.+++|+|.--+||+|+.|+.     |.||
T Consensus      1318 iiAsGs~-q~ikIy~~~G~~l~~~k-------~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~-----V~iY 1378 (1387)
T KOG1517|consen 1318 IIASGSA-QLIKIYSLSGEQLNIIK-------YNPGFMGQRIGSVSCLAFHPHRLLLAAGSADST-----VSIY 1378 (1387)
T ss_pred             eeeecCc-ceEEEEecChhhhcccc-------cCcccccCcCCCcceeeecchhHhhhhccCCce-----EEEe
Confidence            9999998 99999998765321100       001111 12356799999999999999966655     8765

>KOG0270|consensus

Probab=99.83  E-value=5.1e-19  Score=138.01  Aligned_cols=193  Identities=20%  Similarity=0.290  Sum_probs=150.5

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCccee---e-----------eeeeecccCCCccceeEEEECCC-CCeEEEeecCCeE
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLW---L-----------ETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSL  160 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~-----------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i  160 (312)
                      ...+++++.|+.|..|.|||+.-.....   .           ...+.....+|...|.+++|+.. .+.|++|+.|.+|
T Consensus       189 ~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV  268 (463)
T KOG0270|consen  189 GGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTV  268 (463)
T ss_pred             CCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceE
Confidence            3456799999999999999986321110   0           00011123367778888999875 4568899999999


Q ss_pred             EE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeE-EEEeccCCCCcccceeeEEEEEcCC
Q psy15191        161 HL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRL-SLVACSDKTNGVHKRIIWGVAWSHD  237 (312)
Q Consensus       161 ~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~  237 (312)
                      ++ |+.+.++...+..|.+.|.++.|+| ...+|++|+.|+++.+.|.|..... ..++        ..+.|-.++|.|.
T Consensus       269 ~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk--------~~g~VEkv~w~~~  340 (463)
T KOG0270|consen  269 KLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK--------FDGEVEKVAWDPH  340 (463)
T ss_pred             EEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE--------eccceEEEEecCC
Confidence            99 9999999999999999999999999 5678999999999999999953221 1222        5567889999987


Q ss_pred             Cc-eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        238 SR-YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       238 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .. .++++..||.|+-+|++....           ++.++++|.++|.++++++.- .+|+|+     +.|+.|++|
T Consensus       341 se~~f~~~tddG~v~~~D~R~~~~-----------~vwt~~AHd~~ISgl~~n~~~p~~l~t~-----s~d~~Vklw  401 (463)
T KOG0270|consen  341 SENSFFVSTDDGTVYYFDIRNPGK-----------PVWTLKAHDDEISGLSVNIQTPGLLSTA-----STDKVVKLW  401 (463)
T ss_pred             CceeEEEecCCceEEeeecCCCCC-----------ceeEEEeccCCcceEEecCCCCcceeec-----cccceEEEE
Confidence            64 567788999999999998753           789999999999999998764 578888     555669998

>KOG0290|consensus

Probab=99.83  E-value=4.1e-18  Score=126.31  Aligned_cols=249  Identities=14%  Similarity=0.213  Sum_probs=167.8

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCC-CceEEEecC----CCcEEEeeecCC--cc------------cccccccCCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPE-HKDLVSCSL----DKTAILWKYVSE--GN------------YLPYHMRDDS   97 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~-~~~l~s~~~----dg~i~vw~~~~~--~~------------~~~~~~~~~~   97 (312)
                      .+.+..+..+ -++.++.|+..    ++ ..+||.|+.    .+.|.|-.+...  +.            ..+.|.+...
T Consensus        35 ~~eiy~Y~ap-~~lya~~Ws~~----~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~  109 (364)
T KOG0290|consen   35 RKEIYTYNAP-WPLYAMNWSVR----PDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSK  109 (364)
T ss_pred             cceEEEecCC-CceeeeccccC----CCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCcc
Confidence            3445566554 46778888744    22 345777763    345666554422  11            2344444331


Q ss_pred             --CCceEEEEeCCCcEEEEcCCCCcceeee--eeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCc---
Q psy15191         98 --KQLHLLSCSMDKSIIVWAPDPTTGLWLE--TARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWK---  168 (312)
Q Consensus        98 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~---  168 (312)
                        ...+|+++  +..+++|.+...+.....  .+....-..+..+++++.|+. +.+++.+.+-|-+..+ |+++..   
T Consensus       110 g~~pdlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~  187 (364)
T KOG0290|consen  110 GVYPDLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGT  187 (364)
T ss_pred             ccCcchhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccc
Confidence              11244443  357999998853332211  111112234567899999987 6778889999999999 555431   


Q ss_pred             eeeeecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEecc
Q psy15191        169 QIQTLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISR  246 (312)
Q Consensus       169 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~  246 (312)
                      +...+-+|...|..++|...+ +.|++.+.||.+|+||++..+....+-....    ...+...++|++. .+++|+-..
T Consensus       188 vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~----~~~pLlRLswnkqDpnymATf~~  263 (364)
T KOG0290|consen  188 VKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPS----PSTPLLRLSWNKQDPNYMATFAM  263 (364)
T ss_pred             eeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCC----CCCcceeeccCcCCchHHhhhhc
Confidence            244455899999999999854 4789999999999999998765544433221    3567888999975 467777665


Q ss_pred             CC-eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        247 DG-VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |. .|.|.|++.+..           ++..+.+|.+.|++++|.|.. ..|+|+     ++|.++.+|
T Consensus       264 dS~~V~iLDiR~P~t-----------pva~L~~H~a~VNgIaWaPhS~~hicta-----GDD~qaliW  315 (364)
T KOG0290|consen  264 DSNKVVILDIRVPCT-----------PVARLRNHQASVNGIAWAPHSSSHICTA-----GDDCQALIW  315 (364)
T ss_pred             CCceEEEEEecCCCc-----------ceehhhcCcccccceEecCCCCceeeec-----CCcceEEEE
Confidence            54 799999998864           788999999999999999975 688899     556669888

>KOG2110|consensus

Probab=99.82  E-value=2.6e-17  Score=125.83  Aligned_cols=221  Identities=15%  Similarity=0.138  Sum_probs=157.7

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCC--CcEEEEcCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMD--KSIIVWAPD  117 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d--~~i~i~d~~  117 (312)
                      ..+..+.|..+      ...|..|+.|| -++++.+....        ..+.-.-++..  +++..+.+  +.+++++++
T Consensus         6 ~ti~~~~~Nqd------~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~K   76 (391)
T KOG2110|consen    6 PTINFIGFNQD------STLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFK   76 (391)
T ss_pred             cceeeeeeccc------eeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcc
Confidence            45666667666      78888888887 57777655433        12222222332  44444433  458899888


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec---ccCCceeEEEECCCCCEEE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP---CHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~  193 (312)
                      .....+...++        .+|.++.++.  +.|+++-.+. |++ |+++.++..++.   .+...+..+++++.+.+++
T Consensus        77 k~~~ICe~~fp--------t~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylA  145 (391)
T KOG2110|consen   77 KKTTICEIFFP--------TSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLA  145 (391)
T ss_pred             cCceEEEEecC--------CceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEE
Confidence            75555544433        5688888865  4566665555 888 999999888776   3445566666666777888


Q ss_pred             EEe--cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe-EEEEecCCCCCCccccccccc
Q psy15191        194 SVS--RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV-CVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       194 ~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      .-+  ..|.|.+||..+.+....+..       |++.+.+++|+|+|.+||++|+.|+ |||+.+.++.           
T Consensus       146 yp~s~t~GdV~l~d~~nl~~v~~I~a-------H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~-----------  207 (391)
T KOG2110|consen  146 YPGSTTSGDVVLFDTINLQPVNTINA-------HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQ-----------  207 (391)
T ss_pred             ecCCCCCceEEEEEcccceeeeEEEe-------cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCcc-----------
Confidence            633  458999999999998888886       9999999999999999999999994 8999998874           


Q ss_pred             ceeEEeecc--CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        271 PEVQKLYGH--GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 ~~~~~~~~~--~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .+.++..-  ...|.+++|+|++++|++.|..+     +|.|+
T Consensus       208 -kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te-----TVHiF  245 (391)
T KOG2110|consen  208 -KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE-----TVHIF  245 (391)
T ss_pred             -EeeeeeCCceeeEEEEEEECCCCCeEEEecCCC-----eEEEE
Confidence             45555432  45689999999999999995544     48774

>KOG0307|consensus

Probab=99.82  E-value=2.3e-19  Score=154.86  Aligned_cols=233  Identities=17%  Similarity=0.236  Sum_probs=166.5

Q ss_pred             cCcEEEEEEecCcCcCCCC--ceEEEecCCCcEEEeeecCC---cc-----------cccccccCCCC-CceEEEEeCCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEH--KDLVSCSLDKTAILWKYVSE---GN-----------YLPYHMRDDSK-QLHLLSCSMDK  109 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~--~~l~s~~~dg~i~vw~~~~~---~~-----------~~~~~~~~~~~-~~~l~~~~~d~  109 (312)
                      ...-+.++|.+.    .++  .+||.|..||.|.+||...-   ..           -.+.-..+++. ++.|++|+.||
T Consensus        64 ~~rF~kL~W~~~----g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~g  139 (1049)
T KOG0307|consen   64 SNRFNKLAWGSY----GSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDG  139 (1049)
T ss_pred             cccceeeeeccc----CCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCC
Confidence            456789999887    211  25899999999999998762   11           12222333333 33899999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeeecccC--CceeEEEE
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ--LTITQLAF  185 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~--~~v~~~~~  185 (312)
                      .|.|||+...+......     .......|.+++|+.. ...|++++.+|.+.+ |++.-+.+..+..+.  ..+..++|
T Consensus       140 eI~iWDlnn~~tP~~~~-----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~W  214 (1049)
T KOG0307|consen  140 EILIWDLNKPETPFTPG-----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAW  214 (1049)
T ss_pred             cEEEeccCCcCCCCCCC-----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeee
Confidence            99999998743221111     1234567999999985 456888899999999 444333333333332  35789999


Q ss_pred             CCCC-CEEEEEecCC---eEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCC
Q psy15191        186 SPDD-THLVSVSRDR---RWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       186 ~~~~-~~l~~~~~d~---~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +|+. ..+++++.|.   .|.+||+|... ..+.+++       |...|.++.|++.+ ++|++++.|+.|.+|+.+++.
T Consensus       215 hP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~-------H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE  287 (1049)
T KOG0307|consen  215 HPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEG-------HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE  287 (1049)
T ss_pred             CCCCceeeeeecCCCCCceeEeecccccCCchhhhcc-------cccceeeeccCCCCchhhhcccCCCCeeEecCCCce
Confidence            9965 4566776654   59999998543 3344433       89999999999866 899999999999999998873


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                                  .+..+.....++..+.|+|... .++.++-||+     |-|+
T Consensus       288 ------------vl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgk-----I~I~  324 (1049)
T KOG0307|consen  288 ------------VLGELPAQGNWCFDVQWCPRNPSVMAAASFDGK-----ISIY  324 (1049)
T ss_pred             ------------EeeecCCCCcceeeeeecCCCcchhhhheeccc-----eeee
Confidence                        6777877888999999999875 7788866666     7653

>KOG1007|consensus

Probab=99.81  E-value=3.4e-18  Score=126.67  Aligned_cols=179  Identities=14%  Similarity=0.251  Sum_probs=129.7

Q ss_pred             cEEEEcCCCCcceeee-e-eeecccC-CCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce-eeeec-----ccCCc
Q psy15191        110 SIIVWAPDPTTGLWLE-T-ARVGEVG-GNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-IQTLP-----CHQLT  179 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~-~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~-~~~~~-----~~~~~  179 (312)
                      ...||.+....+.... + ..+..+. .+-+.+.|+.|.|++..+++-. +..|.+ ++..... ...+.     .+...
T Consensus        94 ~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~  172 (370)
T KOG1007|consen   94 GAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHS  172 (370)
T ss_pred             eEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccce
Confidence            3668988754332100 0 0011111 2345799999999999988876 555555 4443332 22222     45667


Q ss_pred             eeEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEecC
Q psy15191        180 ITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWGLG  256 (312)
Q Consensus       180 v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~  256 (312)
                      .++-+|+|  |++.+++. .|+++..||+++.+....+...      |...|..+.|+|+.+ +|++++.||.|+|||.+
T Consensus       173 ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dA------Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R  245 (370)
T KOG1007|consen  173 FTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDA------HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR  245 (370)
T ss_pred             ecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhh------hcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence            88889999  78877765 6999999999988777666544      888899999999876 68899999999999998


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccC-CCeEEEEecCCCcccceEEeC
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD-GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..+.           ++.++.+|...|.++.|+|. .++|++||.|..     |.+|
T Consensus       246 ~tk~-----------pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~-----V~Ls  286 (370)
T KOG1007|consen  246 KTKF-----------PVQELPGHSHWVWAVRFNPEHDQLILSGGSDSA-----VNLS  286 (370)
T ss_pred             CCCc-----------cccccCCCceEEEEEEecCccceEEEecCCCce-----eEEE
Confidence            8754           78999999999999999995 578888865554     7765

>KOG0307|consensus

Probab=99.81  E-value=2.9e-19  Score=154.26  Aligned_cols=201  Identities=17%  Similarity=0.244  Sum_probs=154.2

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC-CceEEEEe
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK-QLHLLSCS  106 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~-~~~l~~~~  106 (312)
                      ..+.++..|.+.|..+.|++.     ++++||+|+.||.|.|||+.+.+.          -.+.++.++.. ...|++++
T Consensus       107 ~~la~~~~h~G~V~gLDfN~~-----q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s  181 (1049)
T KOG0307|consen  107 EVLATKSKHTGPVLGLDFNPF-----QGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGS  181 (1049)
T ss_pred             HHHhhhcccCCceeeeecccc-----CCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccC
Confidence            446677889999999999998     355999999999999999987543          12333333322 23678899


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCC---eEEEecccCc------eeeeeccc
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQG---SLHLDVTTWK------QIQTLPCH  176 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~---~i~~d~~~~~------~~~~~~~~  176 (312)
                      .+|.+.|||++..+.......     ......+..++|+|+.. .+++++.|.   .|.+    |+      ..+.+++|
T Consensus       182 ~sg~~~iWDlr~~~pii~ls~-----~~~~~~~S~l~WhP~~aTql~~As~dd~~Pviql----WDlR~assP~k~~~~H  252 (1049)
T KOG0307|consen  182 PSGRAVIWDLRKKKPIIKLSD-----TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQL----WDLRFASSPLKILEGH  252 (1049)
T ss_pred             CCCCceeccccCCCccccccc-----CCCccceeeeeeCCCCceeeeeecCCCCCceeEe----ecccccCCchhhhccc
Confidence            999999999998543221111     12235578999999754 466666544   4667    66      45566799


Q ss_pred             CCceeEEEECCCC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEe
Q psy15191        177 QLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWG  254 (312)
Q Consensus       177 ~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd  254 (312)
                      ...|.+|.|++.+ .+|++++.|+.|.+|+..+++.+..+..       ...++..+.|+|... .++.++-||.|.||.
T Consensus       253 ~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~-------~~nW~fdv~w~pr~P~~~A~asfdgkI~I~s  325 (1049)
T KOG0307|consen  253 QRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA-------QGNWCFDVQWCPRNPSVMAAASFDGKISIYS  325 (1049)
T ss_pred             ccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC-------CCcceeeeeecCCCcchhhhheeccceeeee
Confidence            9999999999955 8999999999999999999888877765       567789999999776 788889999999999


Q ss_pred             cCCCC
Q psy15191        255 LGEPP  259 (312)
Q Consensus       255 ~~~~~  259 (312)
                      +....
T Consensus       326 l~~~~  330 (1049)
T KOG0307|consen  326 LQGTD  330 (1049)
T ss_pred             eecCC
Confidence            98765

>KOG1524|consensus

Probab=99.80  E-value=5.1e-18  Score=135.80  Aligned_cols=237  Identities=13%  Similarity=0.165  Sum_probs=154.9

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----ccccc-----------cCCCCCceEEEEeCCC
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----LPYHM-----------RDDSKQLHLLSCSMDK  109 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----~~~~~-----------~~~~~~~~l~~~~~d~  109 (312)
                      .|...|.|+.|+..      ...+.+++.+..+.-||+.+....    ...+.           ........++.++.||
T Consensus        12 r~~e~vc~v~w~~~------eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DG   85 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSN------EEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDG   85 (737)
T ss_pred             ccceeEEeeccccc------ceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCc
Confidence            35666778888877      555555554444444454443320    00111           1122345799999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCC
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDD  189 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~  189 (312)
                      .+.+.+-...   .     ......|.+.+.+-.|+|+|.-|+++++||.|++-.+++-++..+.....+|.|++|.|+.
T Consensus        86 kf~il~k~~r---V-----E~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S  157 (737)
T KOG1524|consen   86 RFVILNKSAR---V-----ERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNS  157 (737)
T ss_pred             eEEEecccch---h-----hhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCC
Confidence            9998865431   1     1123478899999999999999999999999999333333444444567889999999998


Q ss_pred             CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc-----c
Q psy15191        190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED-----L  264 (312)
Q Consensus       190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----~  264 (312)
                      +.++.+ ..+.+.+=.+.....+...+.       |.+-|.++.|+|...++++|++|-..+|||-.....-..     .
T Consensus       158 ~~vl~c-~g~h~~IKpL~~n~k~i~WkA-------HDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~  229 (737)
T KOG1524|consen  158 NSIVFC-QGGHISIKPLAANSKIIRWRA-------HDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYA  229 (737)
T ss_pred             CceEEe-cCCeEEEeecccccceeEEec-------cCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccc
Confidence            877766 456677777776666666665       999999999999999999999999999999654321110     0


Q ss_pred             ccccccc-----------eeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        265 VQNTLWP-----------EVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       265 ~~~~~~~-----------~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .....|.           .++--....+.|..++||+||..++.|...|.
T Consensus       230 ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~  279 (737)
T KOG1524|consen  230 ITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQ  279 (737)
T ss_pred             eeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCce
Confidence            0001111           01111123456777777777777777754443

>KOG0290|consensus

Probab=99.80  E-value=5e-17  Score=120.63  Aligned_cols=234  Identities=16%  Similarity=0.265  Sum_probs=163.5

Q ss_pred             cccCcEEEEEEecCcC-cCCCCceEEEecCCCcEEEeeecCCcc-----------------cccccccC-CCCCceEEEE
Q psy15191         45 NHKSKVMAVKWVLNTS-LDPEHKDLVSCSLDKTAILWKYVSEGN-----------------YLPYHMRD-DSKQLHLLSC  105 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~-~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------~~~~~~~~-~~~~~~l~~~  105 (312)
                      .|.-+++.+.|.|+.. ..|  .+|||++  ..+|+|.+...+.                 ..+....+ .-+..++.++
T Consensus        94 d~~YP~tK~~wiPd~~g~~p--dlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtS  169 (364)
T KOG0290|consen   94 DHPYPVTKLMWIPDSKGVYP--DLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTS  169 (364)
T ss_pred             CCCCCccceEecCCccccCc--chhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEee
Confidence            5888999999999821 112  3577654  3799999875322                 01111111 2344589999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCceeeeec---ccCCce
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQTLP---CHQLTI  180 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~~~---~~~~~v  180 (312)
                      +-|-+..|||++++....+++    .+..|...|+.++|...+ +.+++.+.||.+++ |++..+-...+.   ....+.
T Consensus       170 SiDTTCTiWdie~~~~~~vkT----QLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pL  245 (364)
T KOG0290|consen  170 SIDTTCTIWDIETGVSGTVKT----QLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPL  245 (364)
T ss_pred             cccCeEEEEEEeeccccceee----EEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcc
Confidence            999999999999852211222    224789999999999865 46889999999999 777665444333   224578


Q ss_pred             eEEEECC-CCCEEEEEecC-CeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecC
Q psy15191        181 TQLAFSP-DDTHLVSVSRD-RRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       181 ~~~~~~~-~~~~l~~~~~d-~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~  256 (312)
                      ..++|++ |-+++++-..| ..|.+.|++.... +..+..       |.+.|++++|.|.. ..|++++.|..+.|||+.
T Consensus       246 lRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~-------H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~  318 (364)
T KOG0290|consen  246 LRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRN-------HQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ  318 (364)
T ss_pred             eeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhc-------CcccccceEecCCCCceeeecCCcceEEEEecc
Confidence            8899998 56788887665 5699999997543 333333       99999999999965 589999999999999998


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEEEec
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASACK  300 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s~  300 (312)
                      ........      .++.... -.+.|+.+.|++ .+.+++.+..
T Consensus       319 q~~~~~~~------dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  319 QMPRENGE------DPILAYT-AGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             cccccCCC------Cchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence            76542211      1222222 467899999995 4677877753

>KOG1963|consensus

Probab=99.80  E-value=1.1e-16  Score=134.98  Aligned_cols=282  Identities=17%  Similarity=0.219  Sum_probs=186.5

Q ss_pred             CCceEeCCCCeEEEEeccCCCceEEEEEeCCCCc-eEEE---EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEe
Q psy15191          5 PGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGK-VLYT---LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILW   80 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~-~~~~---~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw   80 (312)
                      |..|.+...|+.....  |...+..  |....+. ....   -..|.-.+++.+++|+      ++++|+|..||+|.+|
T Consensus       163 ~~~I~~~~~ge~~~i~--~~~~~~~--~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn------~~~~Aa~d~dGrI~vw  232 (792)
T KOG1963|consen  163 PKSIVDNNSGEFKGIV--HMCKIHI--YFVPKHTKHTSSRDITVHHTFNITCVALSPN------ERYLAAGDSDGRILVW  232 (792)
T ss_pred             CccEEEcCCceEEEEE--EeeeEEE--EEecccceeeccchhhhhhcccceeEEeccc------cceEEEeccCCcEEEE
Confidence            5556666666555444  3333332  3332222 1111   1246677899999999      9999999999999999


Q ss_pred             eecC--Ccc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC
Q psy15191         81 KYVS--EGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG  148 (312)
Q Consensus        81 ~~~~--~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  148 (312)
                      .-..  +..          -.+....++++|.+|++|+.++.+.+|.+.+++.+.+        +.-..+|..+.++||+
T Consensus       233 ~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfL--------PRLgs~I~~i~vS~ds  304 (792)
T KOG1963|consen  233 RDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFL--------PRLGSPILHIVVSPDS  304 (792)
T ss_pred             eccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCcccc--------cccCCeeEEEEEcCCC
Confidence            6443  222          1455566678999999999999999999998664333        2445789999999999


Q ss_pred             CeEEEeecCCeEEE-ecccCceeeeec-----------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        149 DYIIAHGFQGSLHL-DVTTWKQIQTLP-----------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       149 ~~l~~~~~~~~i~~-d~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      ...+....|..|.+ ...+........           ...+-.+.++++|.-+.++..+..|.|.+||+.+...+..+.
T Consensus       305 ~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~  384 (792)
T KOG1963|consen  305 DLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQ  384 (792)
T ss_pred             CeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEE
Confidence            99999999999888 433333332222           123446778888877778888888999999887733332222


Q ss_pred             ccCCC-------------------------------------------------------------CcccceeeEEEEEc
Q psy15191        217 CSDKT-------------------------------------------------------------NGVHKRIIWGVAWS  235 (312)
Q Consensus       217 ~~~~~-------------------------------------------------------------~~~~~~~v~~~~~~  235 (312)
                      .....                                                             ...|...+...++.
T Consensus       385 v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~  464 (792)
T KOG1963|consen  385 VCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFL  464 (792)
T ss_pred             EEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEe
Confidence            11000                                                             11144444444443


Q ss_pred             C-CC-ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        236 H-DS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       236 ~-~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      + .. ..+++++.||.++||-+......  ......|.+...-..|..++++++|+.||..|+.+      .|+.|.+|
T Consensus       465 ~~~rs~~~vta~~dg~~KiW~~~~~~n~--~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s------~~~~Itiw  535 (792)
T KOG1963|consen  465 NPTRSVRCVTASVDGDFKIWVFTDDSNI--YKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVS------FDDTITIW  535 (792)
T ss_pred             cCcccceeEEeccCCeEEEEEEeccccc--CcCccceEEeeeeccccCcccchhhcCCCcEEEEe------cCCEEEEe
Confidence            2 22 37889999999999988544221  12255676766655689999999999999766555      34448887

>KOG1538|consensus

Probab=99.80  E-value=8.6e-18  Score=137.99  Aligned_cols=232  Identities=18%  Similarity=0.258  Sum_probs=174.5

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCc----------------eEEEEc-cccCcEEEEEEecCcCcCCCCceEE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGK----------------VLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~----------------~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      -+++.++|..+.++++|++.|+|++|+.++.+                ....++ .|++.|.|+.|+|-      ...|+
T Consensus        36 liyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~------~h~La  109 (1081)
T KOG1538|consen   36 LVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPI------THQLA  109 (1081)
T ss_pred             EEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCch------HHHhh
Confidence            47899999999999999999999999987621                111222 49999999999999      78899


Q ss_pred             EecCCCcEEEeeecCCcc------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         70 SCSLDKTAILWKYVSEGN------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      ||+-. ..-+|..+....      ..+..+.+..+|.+++.|-.+|+|.+-+-...+     ...+....+.+.+|.+++
T Consensus       110 sCsLs-dFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEe-----k~~I~Rpgg~Nspiwsi~  183 (1081)
T KOG1538|consen  110 SCSLS-DFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEE-----KVKIERPGGSNSPIWSIC  183 (1081)
T ss_pred             hcchh-hccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCc-----ceEEeCCCCCCCCceEEE
Confidence            99864 577898766543      456677889999999999999999998644322     233334457889999999


Q ss_pred             ECCCC-----CeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        144 FGPRG-----DYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       144 ~~~~~-----~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      |+|..     ..+++...+.++.+..-+++.+..-+.-.-...|+.+.++|.+++.|+.|+.+.+|... +-.+-++.. 
T Consensus       184 ~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~-GvrLGTvg~-  261 (1081)
T KOG1538|consen  184 WNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRD-GVRLGTVGE-  261 (1081)
T ss_pred             ecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeec-CeEEeeccc-
Confidence            99953     35666666666666222233333222334456788999999999999999999999754 433433332 


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                            ...+|+.++..|++++++.|+.||+|--|++...
T Consensus       262 ------~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fS  295 (1081)
T KOG1538|consen  262 ------QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFS  295 (1081)
T ss_pred             ------cceeEEEEEEccCCceEEEEEccCeeehhhhHHh
Confidence                  6778999999999999999999999999987543

>KOG0303|consensus

Probab=99.79  E-value=1.5e-17  Score=128.26  Aligned_cols=211  Identities=15%  Similarity=0.180  Sum_probs=152.2

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCc
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT  120 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  120 (312)
                      ..+.||.++|..+.|+|.     +...|||||.|.+|.||.+-.+.....                              
T Consensus        75 P~v~GHt~~vLDi~w~Pf-----nD~vIASgSeD~~v~vW~IPe~~l~~~------------------------------  119 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPF-----NDCVIASGSEDTKVMVWQIPENGLTRD------------------------------  119 (472)
T ss_pred             CCccCccccccccccCcc-----CCceeecCCCCceEEEEECCCcccccC------------------------------
Confidence            456789999999999997     346899999999999999854432110                              


Q ss_pred             ceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        121 GLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                          ...+...+.+|...|--++|+|. .+.|++++.|..|.+ +..+++..-.+. |.+.|.++.|+.||.+|++.+.|
T Consensus       120 ----ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckD  194 (472)
T KOG0303|consen  120 ----LTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKD  194 (472)
T ss_pred             ----cccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeeccc
Confidence                01122233478888999999995 467889999999999 777777776776 99999999999999999999999


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec---cCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      +.|+|||.++++.+..-...      .......+.|-.+|.++-+|-   .+..+-+||-..-....         .+.+
T Consensus       195 KkvRv~dpr~~~~v~e~~~h------eG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~---------~~~e  259 (472)
T KOG0303|consen  195 KKVRVIDPRRGTVVSEGVAH------EGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPI---------ALQE  259 (472)
T ss_pred             ceeEEEcCCCCcEeeecccc------cCCCcceeEEeccCceeeeccccccccceeccCcccccCcc---------eeEE
Confidence            99999999998887765332      122344567778888555553   36689999876543221         2333


Q ss_pred             eeccCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      +.. ++.|.---|.||.+++..++    -.|+.||-
T Consensus       260 lDt-SnGvl~PFyD~dt~ivYl~G----KGD~~IRY  290 (472)
T KOG0303|consen  260 LDT-SNGVLLPFYDPDTSIVYLCG----KGDSSIRY  290 (472)
T ss_pred             ecc-CCceEEeeecCCCCEEEEEe----cCCcceEE
Confidence            333 44455556788877776654    45677875

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.79  E-value=3e-16  Score=132.27  Aligned_cols=235  Identities=25%  Similarity=0.376  Sum_probs=174.9

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc-cc---------ccccccC-CCCCc-eEEEEeC-C
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG-NY---------LPYHMRD-DSKQL-HLLSCSM-D  108 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~-~~---------~~~~~~~-~~~~~-~l~~~~~-d  108 (312)
                      .+..|...+..+.+.+.      +..++.++.|+.+.+|+..... ..         .+..... .+++. .++..+. |
T Consensus        60 ~~~~~~~~i~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  133 (466)
T COG2319          60 LLRGHEDSITSIAFSPD------GELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLD  133 (466)
T ss_pred             eeeeccceEEEEEECCC------CcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCC
Confidence            56678999999999998      8899999999999999998875 21         1111111 33443 4444444 8


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      +.+.+|+.....      ........|...+..++|+|+++.+++++. ++.+++ +.........+..|...+.+++|+
T Consensus       134 ~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  207 (466)
T COG2319         134 GTVKLWDLSTPG------KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFS  207 (466)
T ss_pred             ccEEEEEecCCC------eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEc
Confidence            999999988511      111222367888999999999998888885 999999 555555666677899999999999


Q ss_pred             CCCC-EEEEEecCCeEEEEEccCCCeEE-EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        187 PDDT-HLVSVSRDRRWGLYKRQSSGRLS-LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       187 ~~~~-~l~~~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      |++. .+++++.|+.|++||........ .+..       |.... ...|+|++.++++++.|+.+++|++.....    
T Consensus       208 ~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----  275 (466)
T COG2319         208 PDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSG-------HSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS----  275 (466)
T ss_pred             CCcceEEEEecCCCcEEEEECCCCcEEeeecCC-------CCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc----
Confidence            9998 55555899999999888555554 2332       44443 228999999999999999999999987642    


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                             .+..+.+|...|.++.|+|++..+++++.|     +.+++|
T Consensus       276 -------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~~~~~  311 (466)
T COG2319         276 -------LLRTLSGHSSSVLSVAFSPDGKLLASGSSD-----GTVRLW  311 (466)
T ss_pred             -------EEEEEecCCccEEEEEECCCCCEEEEeeCC-----CcEEEE
Confidence                   133336788999999999999999988655     337776

>KOG1009|consensus

Probab=99.78  E-value=3e-18  Score=132.35  Aligned_cols=190  Identities=23%  Similarity=0.319  Sum_probs=142.7

Q ss_pred             eEEEEeCCCcEEEEcCCCCccee--eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE---e------------
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLW--LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---D------------  163 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d------------  163 (312)
                      .+++|+.|..|++|.+.......  ........+..|...|+.+.|+|+|..|++|+.+|.+.+   .            
T Consensus        28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~  107 (434)
T KOG1009|consen   28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEAD  107 (434)
T ss_pred             ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhh
Confidence            89999999999999887643322  222334456789999999999999999999999999988   1            


Q ss_pred             --cccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE
Q psy15191        164 --VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF  241 (312)
Q Consensus       164 --~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  241 (312)
                        .+.|.....+.+|...|..++|+|+++++++++.|..+++||+..+........       |...+..++|.|-++++
T Consensus       108 ~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d-------h~~yvqgvawDpl~qyv  180 (434)
T KOG1009|consen  108 LNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD-------HEHYVQGVAWDPLNQYV  180 (434)
T ss_pred             hCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccc-------cccccceeecchhhhhh
Confidence              112555566668999999999999999999999999999999998888776665       88899999999999999


Q ss_pred             EEeccCCeEEEEecCCCCCCccccc---------ccccceeEEeeccCc----ceeEEEeccCCCeEEEEe
Q psy15191        242 LTISRDGVCVVWGLGEPPTEEDLVQ---------NTLWPEVQKLYGHGY----EIYSLAASHDGTLLASAC  299 (312)
Q Consensus       242 ~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~s  299 (312)
                      ++-+.|...+.+.+...........         .... ....+. |..    --..++|+|+|.+|++.+
T Consensus       181 ~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~-~s~rLf-hDeTlksFFrRlsfTPdG~llvtPa  249 (434)
T KOG1009|consen  181 ASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREG-KSTRLF-HDETLKSFFRRLSFTPDGSLLVTPA  249 (434)
T ss_pred             hhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCc-ceeeee-ecCchhhhhhhcccCCCCcEEEccc
Confidence            9999998777776654432211100         0000 011111 221    244689999999999874

>KOG0650|consensus

Probab=99.78  E-value=2.8e-17  Score=133.14  Aligned_cols=232  Identities=14%  Similarity=0.207  Sum_probs=166.9

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCc------------------------------------------------
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGK------------------------------------------------   38 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~------------------------------------------------   38 (312)
                      +||...+|+++.++. -.+.|.|++|++....                                                
T Consensus       425 riWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~  503 (733)
T KOG0650|consen  425 RIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWS  503 (733)
T ss_pred             EEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeec
Confidence            689999999999998 4668999999886510                                                


Q ss_pred             ---------eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCccc--------ccccccCCCC
Q psy15191         39 ---------VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNY--------LPYHMRDDSK   98 (312)
Q Consensus        39 ---------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~--------~~~~~~~~~~   98 (312)
                               -++..-.|...|..+.|+..      |.||++...+   ..|.|+++......        .+....++|.
T Consensus       504 ~~~~~e~~~~v~~~I~~~k~i~~vtWHrk------GDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs  577 (733)
T KOG0650|consen  504 RASLDELEKGVCIVIKHPKSIRQVTWHRK------GDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPS  577 (733)
T ss_pred             hhhhhhhccceEEEEecCCccceeeeecC------CceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCC
Confidence                     01122237788999999999      9999988654   46889988765442        2334445555


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc-Cceeeeeccc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQTLPCH  176 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~~~~~~  176 (312)
                      ..+|++++. ..|+|||+..  +..+...     ......|..++.+|.|..|+.++.|+.+.+ |+.- -+..+.+..|
T Consensus       578 ~p~lfVaTq-~~vRiYdL~k--qelvKkL-----~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H  649 (733)
T KOG0650|consen  578 KPYLFVATQ-RSVRIYDLSK--QELVKKL-----LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLH  649 (733)
T ss_pred             CceEEEEec-cceEEEehhH--HHHHHHH-----hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhh
Confidence            557777765 5699999986  2222222     234556889999999999999999999999 4432 2344556679


Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccC------CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS------SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                      ...+++++|++.-.+|++|+.||++.||--.-      +-.+.-+.............|..+.|+|...+|++++.||+|
T Consensus       650 ~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~ti  729 (733)
T KOG0650|consen  650 EKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTI  729 (733)
T ss_pred             hhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceE
Confidence            99999999999999999999999999885332      111211111111000023348889999999999999999999


Q ss_pred             EEE
Q psy15191        251 VVW  253 (312)
Q Consensus       251 ~iw  253 (312)
                      ++|
T Consensus       730 rlf  732 (733)
T KOG0650|consen  730 RLF  732 (733)
T ss_pred             Eee
Confidence            998

>KOG0771|consensus

Probab=99.78  E-value=1.6e-17  Score=129.03  Aligned_cols=189  Identities=24%  Similarity=0.286  Sum_probs=144.6

Q ss_pred             EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcce
Q psy15191         51 MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL  122 (312)
Q Consensus        51 ~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  122 (312)
                      ..++|+++      |..+++++.||++|||+......        -.+..+.+++++..|++.+.| ..+||+.+++...
T Consensus       148 k~vaf~~~------gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~  220 (398)
T KOG0771|consen  148 KVVAFNGD------GSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAAL  220 (398)
T ss_pred             eEEEEcCC------CCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchh
Confidence            56777777      99999999999999999655433        356677789999999999999 8999999985322


Q ss_pred             eeeeeeecccCCCccceeEEEECCCC---CeEE--EeecCCeEEE-ecccCceeeeec-----ccCCceeEEEECCCCCE
Q psy15191        123 WLETARVGEVGGNTLGFYGCKFGPRG---DYII--AHGFQGSLHL-DVTTWKQIQTLP-----CHQLTITQLAFSPDDTH  191 (312)
Q Consensus       123 ~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~--~~~~~~~i~~-d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~  191 (312)
                      ...+     ..........+.|+.++   .+++  .....+.++. ++..|+--..++     .....|++|+.+++|++
T Consensus       221 a~~t-----~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf  295 (398)
T KOG0771|consen  221 ARKT-----PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKF  295 (398)
T ss_pred             hhcC-----CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcE
Confidence            2111     12344556778888776   3333  3334455665 666565422111     23457999999999999


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ++.|+.||.|-+++..+.+.++.++..      |...|+.+.|+|+.+++++.+.|....+..+.-
T Consensus       296 ~AlGT~dGsVai~~~~~lq~~~~vk~a------H~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  296 LALGTMDGSVAIYDAKSLQRLQYVKEA------HLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EEEeccCCcEEEEEeceeeeeEeehhh------heeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            999999999999999998888877765      889999999999999999999999999987765

>KOG0642|consensus

Probab=99.78  E-value=4.8e-18  Score=136.45  Aligned_cols=200  Identities=20%  Similarity=0.292  Sum_probs=157.4

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------cccccccCCCCCceEEE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------YLPYHMRDDSKQLHLLS  104 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------~~~~~~~~~~~~~~l~~  104 (312)
                      .++..|.+.|..++|.|.      ...|++++.||++++|+++....                ..+.+....+++..+++
T Consensus       288 ~tl~s~~d~ir~l~~~~s------ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ys  361 (577)
T KOG0642|consen  288 FTLRSHDDCIRALAFHPS------EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYS  361 (577)
T ss_pred             eeeecchhhhhhhhcCCC------CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEe
Confidence            477789999999999998      78999999999999999943221                23444555678889999


Q ss_pred             EeCCCcEEEEcCCCCcceee----eeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec------
Q psy15191        105 CSMDKSIIVWAPDPTTGLWL----ETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP------  174 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~------  174 (312)
                      |+.||+|+.|++.. .....    ...-...+.+|...++.+++++....|++++.||++++    |+......      
T Consensus       362 gg~Dg~I~~w~~p~-n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~----w~~~~~~~~~f~~~  436 (577)
T KOG0642|consen  362 GGIDGTIRCWNLPP-NQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRL----WEPTEESPCTFGEP  436 (577)
T ss_pred             eccCceeeeeccCC-CCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEe----eccCCcCccccCCc
Confidence            99999999997652 11111    11122345689999999999999999999999999999    43211100      


Q ss_pred             --------------------------------------------------ccCCceeEEEECCCCCEEEEEecCCeEEEE
Q psy15191        175 --------------------------------------------------CHQLTITQLAFSPDDTHLVSVSRDRRWGLY  204 (312)
Q Consensus       175 --------------------------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w  204 (312)
                                                                        .....+..+.++|...+.+++..|+.|+++
T Consensus       437 ~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~  516 (577)
T KOG0642|consen  437 KEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFF  516 (577)
T ss_pred             cccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecc
Confidence                                                              112346678888999999999999999999


Q ss_pred             EccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       205 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      |..+...+.....       |...++++++.|+|.+|++++.||.+++|.+...
T Consensus       517 dn~~~~~l~s~~a-------~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k  563 (577)
T KOG0642|consen  517 DNKTGKILHSMVA-------HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK  563 (577)
T ss_pred             cccccccchheee-------ccceecceeecCCCceEEeecCCceeehhhccch
Confidence            9998888776665       8888999999999999999999999999988665

>KOG1523|consensus

Probab=99.78  E-value=1.9e-17  Score=124.35  Aligned_cols=211  Identities=12%  Similarity=0.161  Sum_probs=151.4

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeee
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLE  125 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  125 (312)
                      -..+|+|.+|+++      ...+|.+-....|.||.....+..                                     
T Consensus         9 ~~~pitchAwn~d------rt~iAv~~~~~evhiy~~~~~~~w-------------------------------------   45 (361)
T KOG1523|consen    9 LLEPITCHAWNSD------RTQIAVSPNNHEVHIYSMLGADLW-------------------------------------   45 (361)
T ss_pred             ccCceeeeeecCC------CceEEeccCCceEEEEEecCCCCc-------------------------------------
Confidence            3467777777777      667777766666666665433211                                     


Q ss_pred             eeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE----ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeE
Q psy15191        126 TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL----DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW  201 (312)
Q Consensus       126 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~----d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  201 (312)
                       .....+..|...|+.+.|+|..+.|++|+.|..-++    +-.+|+..-.+..++..++++.|+|.++.|++|+..+.|
T Consensus        46 -~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~i  124 (361)
T KOG1523|consen   46 -EPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLI  124 (361)
T ss_pred             -eeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEE
Confidence             011122367888999999999999999999999888    334566666677899999999999999999999999999


Q ss_pred             EEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc------ccccceeEE
Q psy15191        202 GLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ------NTLWPEVQK  275 (312)
Q Consensus       202 ~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~  275 (312)
                      .+|-++..+..-.-+.....   +...|+++.|+|++-+|++|+.|+..+||..--....+....      ....+.+.+
T Consensus       125 sVcy~E~ENdWWVsKhikkP---irStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E  201 (361)
T KOG1523|consen  125 SVCYYEQENDWWVSKHIKKP---IRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSE  201 (361)
T ss_pred             EEEEEecccceehhhhhCCc---cccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHh
Confidence            99988765544222211111   677899999999999999999999999996533222111110      111123444


Q ss_pred             eeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      +....+.|..+.|+|+|..|+-.+.|+.
T Consensus       202 ~~~~ggwvh~v~fs~sG~~lawv~Hds~  229 (361)
T KOG1523|consen  202 ASSSGGWVHGVLFSPSGNRLAWVGHDST  229 (361)
T ss_pred             hccCCCceeeeEeCCCCCEeeEecCCCc
Confidence            4456788999999999999999976665

>KOG0649|consensus

Probab=99.77  E-value=2.6e-16  Score=114.11  Aligned_cols=199  Identities=14%  Similarity=0.125  Sum_probs=138.9

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------c----------ccccccCCCCCceEEEEeCCCc
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------Y----------LPYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~----------~~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      .|.+-+++|.      +++|+.|..+|.|.+..+..-..        .          .+..+.+.  ..+|++|+ ||.
T Consensus        12 tvf~qa~sp~------~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~   82 (325)
T KOG0649|consen   12 TVFAQAISPS------KQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGL   82 (325)
T ss_pred             HHHHHhhCCc------ceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-Cce
Confidence            4555677777      89999999999999998764221        0          11112222  12455555 499


Q ss_pred             EEEEcCCCCcc------eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEE
Q psy15191        111 IIVWAPDPTTG------LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQL  183 (312)
Q Consensus       111 i~i~d~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~  183 (312)
                      |+-|..+....      .+....+...-.-.-..|+++-..|..+-++.++.|+.++- |++++++.+.+++|++.|.++
T Consensus        83 V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~v  162 (325)
T KOG0649|consen   83 VYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSV  162 (325)
T ss_pred             EEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeee
Confidence            99987664321      11111111110112245788999998888888888998888 999999999999999999999


Q ss_pred             EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc---cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV---HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .--.....+++|++||++|+||.++.+....+.........   ....|.+++-  +..+|++|+. -.+.+|.++...
T Consensus       163 v~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgG-p~lslwhLrsse  238 (325)
T KOG0649|consen  163 VGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLRSSE  238 (325)
T ss_pred             eecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCC-CceeEEeccCCC
Confidence            98554556889999999999999999998888765544332   3345666665  4567877654 459999998764

>KOG1524|consensus

Probab=99.77  E-value=7e-17  Score=129.39  Aligned_cols=168  Identities=18%  Similarity=0.235  Sum_probs=121.4

Q ss_pred             CceEEEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      ...|+.++.||.+.+-+-...-.       -.+....++++|.-|++++.||.|++|.-..   ....     .+.....
T Consensus        75 ~d~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG---MLRS-----tl~Q~~~  146 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG---MLRS-----TVVQNEE  146 (737)
T ss_pred             cceEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc---hHHH-----HHhhcCc
Confidence            35688899999999887543221       3556677899999999999999999997542   1111     1124556


Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      +|+|++|.|+.+.++.+. .+.+.+ .+......-..++|.+-|.++.|+|..+.+++|++|-..++||... ..+....
T Consensus       147 ~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G-~~Lf~S~  224 (737)
T KOG1524|consen  147 SIRCARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG-ANLFTSA  224 (737)
T ss_pred             eeEEEEECCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC-cccccCC
Confidence            899999999888766543 345555 3333333344568999999999999999999999999999999874 3332222


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV  251 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  251 (312)
                      .       |+.+|++++|+|+ +.++.++.. .++
T Consensus       225 ~-------~ey~ITSva~npd-~~~~v~S~n-t~R  250 (737)
T KOG1524|consen  225 A-------EEYAITSVAFNPE-KDYLLWSYN-TAR  250 (737)
T ss_pred             h-------hccceeeeeeccc-cceeeeeee-eee
Confidence            2       8889999999999 666666543 344

>KOG1034|consensus

Probab=99.76  E-value=1.5e-17  Score=125.35  Aligned_cols=220  Identities=17%  Similarity=0.287  Sum_probs=151.9

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCccee
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW  123 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  123 (312)
                      .+|+.+|..++|.+-..- .+...+|+++.+ .+.+|.....                       +-+++.....     
T Consensus        35 ed~~~~I~gv~fN~~~~~-~e~~vfatvG~~-rvtiy~c~~d-----------------------~~ir~lq~y~-----   84 (385)
T KOG1034|consen   35 EDHNKPIFGVAFNSFLGC-DEPQVFATVGGN-RVTIYECPGD-----------------------GGIRLLQSYA-----   84 (385)
T ss_pred             ccCCCccceeeeehhcCC-CCCceEEEeCCc-EEEEEEECCc-----------------------cceeeeeecc-----
Confidence            367788999998753111 223456666544 5666654322                       2222221111     


Q ss_pred             eeeeeecccCCCccceeEEEECCC----CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCC-CCEEEEEec
Q psy15191        124 LETARVGEVGGNTLGFYGCKFGPR----GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD-DTHLVSVSR  197 (312)
Q Consensus       124 ~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~  197 (312)
                              -..+....+.++|+-+    ..++++++.-|.|++ |+.+.+....+.+|...|+.+.+.|+ .+++++++.
T Consensus        85 --------D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~Sk  156 (385)
T KOG1034|consen   85 --------DEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASK  156 (385)
T ss_pred             --------CCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecC
Confidence                    0123444556666542    457889999999999 99999999999999999999999995 578999999


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc----------
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN----------  267 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------  267 (312)
                      |..|++|++++...+..+.+...    |...|.++.|+++|.+|++++.|..|++|++....-...+...          
T Consensus       157 D~svRlwnI~~~~Cv~VfGG~eg----HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~  232 (385)
T KOG1034|consen  157 DHSVRLWNIQTDVCVAVFGGVEG----HRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTR  232 (385)
T ss_pred             CceEEEEeccCCeEEEEeccccc----ccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccC
Confidence            99999999999999888877554    9999999999999999999999999999999843211111000          


Q ss_pred             ------cccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        268 ------TLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            ...+...+-.-|...|-++.|-  |+++++-|-++.     |..|
T Consensus       233 pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscena-----I~~w  276 (385)
T KOG1034|consen  233 PFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENA-----IVCW  276 (385)
T ss_pred             cCCccccccccccccccccchHHHHHHH--hhheeecccCce-----EEEE
Confidence                  0111111233467777777774  468888854444     8777

>KOG1963|consensus

Probab=99.76  E-value=4.8e-16  Score=131.21  Aligned_cols=262  Identities=19%  Similarity=0.232  Sum_probs=167.6

Q ss_pred             CCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc
Q psy15191         12 EGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY   91 (312)
Q Consensus        12 ~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~   91 (312)
                      ++++.+....+..-.|    ++..++.+++.+.+|..+++++.+.|.   +.+-.++++++.||.|++||...+.....+
T Consensus        26 nD~k~l~~~~~~~V~V----yS~~Tg~~i~~l~~~~a~l~s~~~~~~---~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~   98 (792)
T KOG1963|consen   26 NDAKFLFLCTGNFVKV----YSTATGECITSLEDHTAPLTSVIVLPS---SENANYLIVCSLDGTIRVWDWSDGELLKTF   98 (792)
T ss_pred             cCCcEEEEeeCCEEEE----EecchHhhhhhcccccCccceeeecCC---CccceEEEEEecCccEEEecCCCcEEEEEE
Confidence            3455555555555555    788899999999999999999999998   121257889999999999999887763222


Q ss_pred             cccCC-----------CCCceEEEEeCCCcEE-EEcCCCCcceeeeeeeecc--------cCCCccceeEEEECCCCCeE
Q psy15191         92 HMRDD-----------SKQLHLLSCSMDKSII-VWAPDPTTGLWLETARVGE--------VGGNTLGFYGCKFGPRGDYI  151 (312)
Q Consensus        92 ~~~~~-----------~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l  151 (312)
                      -....           .....+.....+..+. -...+.  ...........        ...+.. ..++.+++.|.+.
T Consensus        99 ~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~--~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~  175 (792)
T KOG1963|consen   99 DNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKL--SKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFK  175 (792)
T ss_pred             ecCCceeEEEechhHhCccceeEeecccceeeeeccccc--ccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEE
Confidence            11111           1111111111111111 011111  00001111111        011111 4568888888877


Q ss_pred             EEeecCCeEEEeccc--Cceee--eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccC--C--CeEEEEeccCCCCc
Q psy15191        152 IAHGFQGSLHLDVTT--WKQIQ--TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS--S--GRLSLVACSDKTNG  223 (312)
Q Consensus       152 ~~~~~~~~i~~d~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~--~--~~~~~~~~~~~~~~  223 (312)
                      +..-..+...+...+  +....  .-..|...+++.++||++++++++..||.|.+|.--.  .  .....+.-      
T Consensus       176 ~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW------  249 (792)
T KOG1963|consen  176 GIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW------  249 (792)
T ss_pred             EEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEe------
Confidence            766555544442222  11111  0115777799999999999999999999999997443  1  11122222      


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                       |...|++++|+++|.+|++|+..|.+.+|.+.++..             +-+..-.++|..+.+|||+.+.+....|++
T Consensus       250 -H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k-------------qfLPRLgs~I~~i~vS~ds~~~sl~~~DNq  315 (792)
T KOG1963|consen  250 -HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKK-------------QFLPRLGSPILHIVVSPDSDLYSLVLEDNQ  315 (792)
T ss_pred             -cccccceeEEecCCceEeecccceEEEEEeecCCCc-------------ccccccCCeeEEEEEcCCCCeEEEEecCce
Confidence             778899999999999999999999999999998852             223344689999999999999999966665

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.76  E-value=9.2e-17  Score=134.74  Aligned_cols=221  Identities=14%  Similarity=0.067  Sum_probs=148.7

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCccc-------ccccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNY-------LPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~-------~~~~~~~~~~~~~  101 (312)
                      |+.++.. .+.+..|...+.+.+|+|+      |+.|+.++.+   ..|++||+.+++..       ......++|++..
T Consensus       189 ~d~dg~~-~~~lt~~~~~v~~p~wSPD------G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~  261 (429)
T PRK01742        189 ADYDGFN-QFIVNRSSQPLMSPAWSPD------GSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSR  261 (429)
T ss_pred             ECCCCCC-ceEeccCCCccccceEcCC------CCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCE
Confidence            6766554 5667778889999999999      8999887654   36999999876531       1223456788888


Q ss_pred             EEEEe-CCCcEEEE--cCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE---ecccCceeeeec
Q psy15191        102 LLSCS-MDKSIIVW--APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL---DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~~~~-~d~~i~i~--d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~---d~~~~~~~~~~~  174 (312)
                      |+.++ .+|.+.||  |+.+.+.   ..     +..+...+....|+|+|+.|+..+ .++...+   +...... ..+ 
T Consensus       262 La~~~~~~g~~~Iy~~d~~~~~~---~~-----lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~-~~l-  331 (429)
T PRK01742        262 LAFASSKDGVLNIYVMGANGGTP---SQ-----LTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA-SLV-  331 (429)
T ss_pred             EEEEEecCCcEEEEEEECCCCCe---Ee-----eccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe-EEe-
Confidence            87764 67876665  5544321   11     123445577899999999877655 4666666   3322222 112 


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .+..  ....|+|||++|+..+.++ +.+||+.++........       .  ....+.|+|+|++|+.++.++.+.+|+
T Consensus       332 ~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~-------~--~~~~~~~sPdG~~i~~~s~~g~~~~l~  399 (429)
T PRK01742        332 GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST-------F--LDESPSISPNGIMIIYSSTQGLGKVLQ  399 (429)
T ss_pred             cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC-------C--CCCCceECCCCCEEEEEEcCCCceEEE
Confidence            2333  4578999999998887765 55699987654432221       1  123578999999999999999888887


Q ss_pred             cCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      +.....          .....+.+|.+.+...+|+|-
T Consensus       400 ~~~~~G----------~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        400 LVSADG----------RFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             EEECCC----------CceEEccCCCCCCCCcccCCC
Confidence            642110          156777788888999999985

>KOG1310|consensus

Probab=99.76  E-value=1.9e-16  Score=127.34  Aligned_cols=189  Identities=19%  Similarity=0.213  Sum_probs=124.4

Q ss_pred             EEEEeccCCCceEEEEEeCCC-------------------CceEEEE-ccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191         16 VLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTL-TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK   75 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg   75 (312)
                      +-+.|.||++.|+|+.|+.++                   .+++..+ .||...|.++.|.|.    .+.++++||+.|.
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~----tnnriv~sgAgDk  117 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY----TNNRIVLSGAGDK  117 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc----CCCeEEEeccCcc
Confidence            345688999999999988765                   2344444 489999999999998    6678999999999


Q ss_pred             cEEEeeecCCcc----------c--------ccccccCCCCC-ceEEEEeCCCcEEEEcCCCCcceee-e--eeeecccC
Q psy15191         76 TAILWKYVSEGN----------Y--------LPYHMRDDSKQ-LHLLSCSMDKSIIVWAPDPTTGLWL-E--TARVGEVG  133 (312)
Q Consensus        76 ~i~vw~~~~~~~----------~--------~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~-~--~~~~~~~~  133 (312)
                      .|+++|+...+.          .        .+.-....+++ ..+.+++.||+|+-+|++....-.. .  ........
T Consensus       118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~  197 (758)
T KOG1310|consen  118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN  197 (758)
T ss_pred             eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence            999999985221          0        11111122333 4899999999999999987321100 0  00011111


Q ss_pred             CCccceeEEEECCC-CCeEEEeecCCeEEE-eccc--------Cce----------eeeec-ccC-----------Ccee
Q psy15191        134 GNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTT--------WKQ----------IQTLP-CHQ-----------LTIT  181 (312)
Q Consensus       134 ~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~--------~~~----------~~~~~-~~~-----------~~v~  181 (312)
                      ..--...++..+|. ..+|++|+.+-..++ |.+.        |..          +..+. +|-           ..++
T Consensus       198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t  277 (758)
T KOG1310|consen  198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCT  277 (758)
T ss_pred             hhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeE
Confidence            22345678999995 456888888888888 5211        110          00000 121           1146


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      -+.|+|+|..|+..-....|+++|+..
T Consensus       278 ~vtfnpNGtElLvs~~gEhVYlfdvn~  304 (758)
T KOG1310|consen  278 YVTFNPNGTELLVSWGGEHVYLFDVNE  304 (758)
T ss_pred             EEEECCCCcEEEEeeCCeEEEEEeecC
Confidence            678999999888776667799999876

>KOG1240|consensus

Probab=99.75  E-value=3.7e-16  Score=136.27  Aligned_cols=264  Identities=14%  Similarity=0.073  Sum_probs=166.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------cccccccCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDD   96 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~   96 (312)
                      |++ .|.++..+..|...|..++.++.     ++.+++|||.||+|++|+...-..               ........-
T Consensus      1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~-----~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSE-----HTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC 1107 (1431)
T ss_pred             CCc-cceEeehhhhccccccceeecCC-----CCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec
Confidence            666 37889999999999999998876     358999999999999999865332               112222233


Q ss_pred             CCCceEEEEeCCCcEEEEcCCCCcce--eeeeeeecccCCCccceeEEEECC-CCC-eEEEeecCCeEEE-ecccCceee
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPDPTTGL--WLETARVGEVGGNTLGFYGCKFGP-RGD-YIIAHGFQGSLHL-DVTTWKQIQ  171 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~l~~~~~~~~i~~-d~~~~~~~~  171 (312)
                      ..+..++.++.||.|++.+++-....  ...............-+..-+|.. .+. .++.+...+.+.. |+++.....
T Consensus      1108 ~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w 1187 (1431)
T KOG1240|consen 1108 GNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW 1187 (1431)
T ss_pred             cCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH
Confidence            45668999999999999998762111  111112222222222233333333 233 5677777777777 443322111


Q ss_pred             eec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC---ceEEEec-
Q psy15191        172 TLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS---RYFLTIS-  245 (312)
Q Consensus       172 ~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~-  245 (312)
                      .++  ...+.|++++.+|.+++++.|+..|.+.+||++=...+.....+      +..++..+..+|-.   ...++++ 
T Consensus      1188 ~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P------~~~~i~~v~~~~~~~~~S~~vs~~~ 1261 (1431)
T KOG1240|consen 1188 RLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHP------ARAPIRHVWLCPTYPQESVSVSAGS 1261 (1431)
T ss_pred             hhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCc------ccCCcceEEeeccCCCCceEEEecc
Confidence            111  33578999999999999999999999999999977777666654      45667777777633   4555444 


Q ss_pred             -cCCeEEEEecCCCCCCcccccccccceeEE-ee------ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        246 -RDGVCVVWGLGEPPTEEDLVQNTLWPEVQK-LY------GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       ..+.|.+|++.++.....+.....-+.+.. +.      .+.-......+..-+.++.+|+.|.+     ||.|
T Consensus      1262 ~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~k-----IR~w 1331 (1431)
T KOG1240|consen 1262 SSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMK-----IRKW 1331 (1431)
T ss_pred             cCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccc-----eeec
Confidence             477899999998854332211100000000 00      11222333445555678899966666     9988

>KOG2110|consensus

Probab=99.75  E-value=9.4e-15  Score=112.08  Aligned_cols=193  Identities=16%  Similarity=0.229  Sum_probs=143.2

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCC--CcEEEeeecCCcccccccccCC-----CCCceEEEEeCCCcEEEEcCCCCcc
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLD--KTAILWKYVSEGNYLPYHMRDD-----SKQLHLLSCSMDKSIIVWAPDPTTG  121 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~d--g~i~vw~~~~~~~~~~~~~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~  121 (312)
                      .|-.+-|+..        ++|..+.+  +.+++.++..+...+-.+.+.+     -+.++|+++-.+. |+|||+++  .
T Consensus        48 ~IvEmLFSSS--------LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~--M  116 (391)
T KOG2110|consen   48 SIVEMLFSSS--------LVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRMNRKRLVVCLEES-IYIYDIKD--M  116 (391)
T ss_pred             EEEEeecccc--------eeEEEecCCCceEEEEEcccCceEEEEecCCceEEEEEccceEEEEEccc-EEEEeccc--c
Confidence            4555556554        56555544  3488988887665433222221     1333677777666 99999998  4


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCeEEEe--ecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH--GFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                      +.+.++..  .+.+...+.++.+++.+.+++.-  ...|.|.+ |..+-+....+..|.+.+.+++|+++|.+|||++..
T Consensus       117 klLhTI~t--~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeK  194 (391)
T KOG2110|consen  117 KLLHTIET--TPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEK  194 (391)
T ss_pred             eeehhhhc--cCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccC
Confidence            44444432  22455557667777777788753  35688888 888888888899999999999999999999999999


Q ss_pred             Ce-EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        199 RR-WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       199 ~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |+ ||+|.+.+++.+..++...     ....|.+++|+|++++|++.+..++|+||.+....
T Consensus       195 GTVIRVf~v~~G~kl~eFRRG~-----~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  195 GTVIRVFSVPEGQKLYEFRRGT-----YPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS  251 (391)
T ss_pred             ceEEEEEEcCCccEeeeeeCCc-----eeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence            88 7999999999998887543     34568999999999999999999999999987654

>KOG2394|consensus

Probab=99.74  E-value=1.7e-16  Score=127.06  Aligned_cols=173  Identities=23%  Similarity=0.257  Sum_probs=125.8

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecc--------
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVT--------  165 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~--------  165 (312)
                      .+.+.-++.+-.-|.|.+.|....+...+...   ...-....++++.|-|.+ ..++++-.+|.+.+ |..        
T Consensus       182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne---~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p  258 (636)
T KOG2394|consen  182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNE---ERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAP  258 (636)
T ss_pred             CCCCcceEEeeccCceEEecchhhHHHHhhhh---cccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCC
Confidence            45666788898899999998765221111111   111234679999999844 45666667787777 321        


Q ss_pred             cCce--------------------eeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        166 TWKQ--------------------IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       166 ~~~~--------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                      .|..                    +....--.+.|+..+|+|||++||+.+.||.+||||..+.+.+...+.       -
T Consensus       259 ~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkS-------Y  331 (636)
T KOG2394|consen  259 SYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKS-------Y  331 (636)
T ss_pred             cccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHh-------h
Confidence            0100                    000112345788999999999999999999999999998766544443       4


Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  290 (312)
                      -+...|++|+|||+||++|++|--|.||.+....            .+..-++|.++|+.|+|.|
T Consensus       332 FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erR------------VVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  332 FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERR------------VVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             ccceEEEEEcCCccEEEecCCcceEEEEEeccce------------EEEeccccccceeeEeecc
Confidence            4668899999999999999999999999998873            6778889999999999985

>KOG0303|consensus

Probab=99.74  E-value=4.9e-17  Score=125.46  Aligned_cols=156  Identities=15%  Similarity=0.225  Sum_probs=128.0

Q ss_pred             ccCCCccceeEEEECC-CCCeEEEeecCCeEEEecccCce------------eeeecccCCceeEEEECC-CCCEEEEEe
Q psy15191        131 EVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHLDVTTWKQ------------IQTLPCHQLTITQLAFSP-DDTHLVSVS  196 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~d~~~~~~------------~~~~~~~~~~v~~~~~~~-~~~~l~~~~  196 (312)
                      .+.+|..+|..++|+| +...+++|++|..|.+    |++            +..+.+|...|.-++|+| -.+.|++++
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~v----W~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag  151 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMV----WQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG  151 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEE----EECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhcc
Confidence            4568999999999999 5677999999999999    543            345669999999999999 456889999


Q ss_pred             cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191        197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL  276 (312)
Q Consensus       197 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  276 (312)
                      .|.+|.+|++.+++.+..+.        |...|.++.|+.+|.+|++++.|.+|+|||.+.+.            .+.+-
T Consensus       152 ~Dn~v~iWnv~tgeali~l~--------hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~------------~v~e~  211 (472)
T KOG0303|consen  152 SDNTVSIWNVGTGEALITLD--------HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGT------------VVSEG  211 (472)
T ss_pred             CCceEEEEeccCCceeeecC--------CCCeEEEEEeccCCceeeeecccceeEEEcCCCCc------------Eeeec
Confidence            99999999999998887766        88899999999999999999999999999998884            45555


Q ss_pred             eccCc-ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        277 YGHGY-EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       277 ~~~~~-~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+|.+ .-..+.|-.+|. ++|.+-.+. .+.++-+|
T Consensus       212 ~~heG~k~~Raifl~~g~-i~tTGfsr~-seRq~aLw  246 (472)
T KOG0303|consen  212 VAHEGAKPARAIFLASGK-IFTTGFSRM-SERQIALW  246 (472)
T ss_pred             ccccCCCcceeEEeccCc-eeeeccccc-cccceecc
Confidence            66765 345567888888 555555443 56667777

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.73  E-value=3.9e-14  Score=115.39  Aligned_cols=238  Identities=13%  Similarity=0.136  Sum_probs=141.0

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCCCce--EEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEEEeee
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKV--LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKY   82 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~   82 (312)
                      ..+.-..+++.++....-...|.....+ +.++.  +.... .......++|+|+      +++|++++ .++.|.+|++
T Consensus        38 ~~l~~spd~~~lyv~~~~~~~i~~~~~~-~~g~l~~~~~~~-~~~~p~~i~~~~~------g~~l~v~~~~~~~v~v~~~  109 (330)
T PRK11028         38 QPMVISPDKRHLYVGVRPEFRVLSYRIA-DDGALTFAAESP-LPGSPTHISTDHQ------GRFLFSASYNANCVSVSPL  109 (330)
T ss_pred             ccEEECCCCCEEEEEECCCCcEEEEEEC-CCCceEEeeeec-CCCCceEEEECCC------CCEEEEEEcCCCeEEEEEE
Confidence            3343344566665544334455433333 23332  22222 2335667888888      88887765 4889999999


Q ss_pred             cCCcc----c-------ccccccCCCCCceEE-EEeCCCcEEEEcCCCCcceeeeee-eecccCCCccceeEEEECCCCC
Q psy15191         83 VSEGN----Y-------LPYHMRDDSKQLHLL-SCSMDKSIIVWAPDPTTGLWLETA-RVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        83 ~~~~~----~-------~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                      ++...    .       .+.....++++.+++ +...++.|.+||+.+.. ...... ..... .....+..++|+|+++
T Consensus       110 ~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g-~l~~~~~~~~~~-~~g~~p~~~~~~pdg~  187 (330)
T PRK11028        110 DKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG-HLVAQEPAEVTT-VEGAGPRHMVFHPNQQ  187 (330)
T ss_pred             CCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC-cccccCCCceec-CCCCCCceEEECCCCC
Confidence            74321    1       112223467777775 45566999999997622 111000 00001 1123467899999999


Q ss_pred             eEEEeec-CCeEEE-eccc--C--ceeeeecc------cCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEe
Q psy15191        150 YIIAHGF-QGSLHL-DVTT--W--KQIQTLPC------HQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       150 ~l~~~~~-~~~i~~-d~~~--~--~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~  216 (312)
                      +++++.. ++.|.+ ++..  .  +....+..      +......+.++|++++++++.. ++.|.+|++........+.
T Consensus       188 ~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~  267 (330)
T PRK11028        188 YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFE  267 (330)
T ss_pred             EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEe
Confidence            9988876 788887 5441  2  22222221      1122346889999999998864 6899999997544222222


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCC
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGE  257 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~  257 (312)
                      ....    .......++++|+|++|+++.. ++.|.+|++..
T Consensus       268 ~~~~----~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        268 GHQP----TETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             EEEe----ccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            1110    1123457899999999998775 88999998864

>KOG1272|consensus

Probab=99.73  E-value=1.4e-17  Score=130.89  Aligned_cols=206  Identities=16%  Similarity=0.200  Sum_probs=165.1

Q ss_pred             EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191         50 VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPT  119 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  119 (312)
                      ...+.|+.+      |+.|+.|+..|.|-.+|..+....          .+.|++..    .+++......++|||-..-
T Consensus       132 PY~~~ytrn------GrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHne----q~~AVAQK~y~yvYD~~Gt  201 (545)
T KOG1272|consen  132 PYHLDYTRN------GRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNE----QFFAVAQKKYVYVYDNNGT  201 (545)
T ss_pred             CeeeeecCC------ccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcch----HHHHhhhhceEEEecCCCc
Confidence            445667666      999999999999999999988762          23333322    4566677788999997743


Q ss_pred             cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                      +..|+.         ....|..+.|-|..-+|++++..|.++. |+.+++++..+....+.+..|+-+|-...+-+|..+
T Consensus       202 ElHClk---------~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Ghsn  272 (545)
T KOG1272|consen  202 ELHCLK---------RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSN  272 (545)
T ss_pred             EEeehh---------hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCC
Confidence            333322         2345788999999999999999999999 999999999998888899999999988899999999


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      |+|.+|.....+++..+.+       |.++|.++++.++|+|+|+++.|..++|||++...            .+.++..
T Consensus       273 GtVSlWSP~skePLvKiLc-------H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~------------ql~t~~t  333 (545)
T KOG1272|consen  273 GTVSLWSPNSKEPLVKILC-------HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY------------QLHTYRT  333 (545)
T ss_pred             ceEEecCCCCcchHHHHHh-------cCCCcceEEECCCCcEEeecccccceeEeeecccc------------ccceeec
Confidence            9999999998888776666       99999999999999999999999999999998763            2223322


Q ss_pred             cCcceeEEEeccCCCe
Q psy15191        279 HGYEIYSLAASHDGTL  294 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~  294 (312)
                       .-+...+++|..|-+
T Consensus       334 -p~~a~~ls~SqkglL  348 (545)
T KOG1272|consen  334 -PHPASNLSLSQKGLL  348 (545)
T ss_pred             -CCCccccccccccce
Confidence             345677888877643

>KOG1334|consensus

Probab=99.73  E-value=1.4e-16  Score=126.13  Aligned_cols=257  Identities=14%  Similarity=0.148  Sum_probs=174.9

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEEEE
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSC  105 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~  105 (312)
                      .+...|..|.+.|+.+.|...      |..|++|+.|..|.+||...+..            ....|++++.+ ..++++
T Consensus       133 ~l~~kL~~H~GcVntV~FN~~------Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d-~ti~~~  205 (559)
T KOG1334|consen  133 RLQKKLNKHKGCVNTVHFNQR------GDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGD-RTIVTS  205 (559)
T ss_pred             hhhhcccCCCCccceeeeccc------CceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCC-cCceec
Confidence            455678899999999999998      99999999999999999877654            23345555443 478999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeec---ccCC--
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLP---CHQL--  178 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~---~~~~--  178 (312)
                      +.||.+++=.+......    .....+..|.++|..++.-|+.. .|.+++.|+.+.- |+++......+.   .+..  
T Consensus       206 s~dgqvr~s~i~~t~~~----e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~  281 (559)
T KOG1334|consen  206 SRDGQVRVSEILETGYV----ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKER  281 (559)
T ss_pred             cccCceeeeeeccccce----ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccc
Confidence            99999998776542211    11223357889999999999665 4888999998775 766655443332   2333  


Q ss_pred             -ceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeE------EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        179 -TITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRL------SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       179 -~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                       ....++.+|. ...+++++.|..+++||.+.....      ..+....... ...-.|++++++.++.-|.++..|-.|
T Consensus       282 v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~-d~~v~ITgl~Ysh~~sElLaSYnDe~I  360 (559)
T KOG1334|consen  282 VGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVE-DDPVNITGLVYSHDGSELLASYNDEDI  360 (559)
T ss_pred             eeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccc-cCcccceeEEecCCccceeeeecccce
Confidence             5788999994 448999999999999998863322      1111111111 245569999999888777777778889


Q ss_pred             EEEecCCCCCCccccccc-ccceeE-EeeccCc--ceeEEEe-ccCCCeEEEEecCCCcccceEEeC
Q psy15191        251 VVWGLGEPPTEEDLVQNT-LWPEVQ-KLYGHGY--EIYSLAA-SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~-~~~~~~-~~~~~~~--~v~~~~~-s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++.-..+.. ..+.... .-+.+. .++||..  .|..+-| -|...|+++||.-|.     |.||
T Consensus       361 YLF~~~~~~G-~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGh-----IFiW  421 (559)
T KOG1334|consen  361 YLFNKSMGDG-SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGH-----IFIW  421 (559)
T ss_pred             EEeccccccC-CCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccce-----EEEE
Confidence            9994332211 1111000 001222 2667754  5777765 688999999955555     9999

>KOG1523|consensus

Probab=99.73  E-value=9.3e-16  Score=115.39  Aligned_cols=219  Identities=15%  Similarity=0.200  Sum_probs=137.4

Q ss_pred             EEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCC
Q psy15191         18 YTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDS   97 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~   97 (312)
                      +.+.--..+|+|-+|+.+..+....-..|+-.|....  ..      ..+         ... .........+....+.+
T Consensus         4 ~~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~--~~------~~w---------~~~-htls~Hd~~vtgvdWap   65 (361)
T KOG1523|consen    4 VVFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSML--GA------DLW---------EPA-HTLSEHDKIVTGVDWAP   65 (361)
T ss_pred             EEeeeccCceeeeeecCCCceEEeccCCceEEEEEec--CC------CCc---------eec-eehhhhCcceeEEeecC
Confidence            3444456789999999876554444333332222221  11      000         000 00111112222344556


Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE----ecccCce-eee
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL----DVTTWKQ-IQT  172 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~----d~~~~~~-~~~  172 (312)
                      ..+.|++|+.|+.-++|....+ +.+..++.   +..++..++++.|+|.++.+++|+.-..|.+    .-+.|=. ...
T Consensus        66 ~snrIvtcs~drnayVw~~~~~-~~Wkptlv---LlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhi  141 (361)
T KOG1523|consen   66 KSNRIVTCSHDRNAYVWTQPSG-GTWKPTLV---LLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHI  141 (361)
T ss_pred             CCCceeEccCCCCccccccCCC-Ceecccee---EEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhh
Confidence            6668888888888888877321 33332222   2346677899999999999999999888877    2223322 222


Q ss_pred             ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc----CCC-------Cc-ccceeeEEEEEcCCCce
Q psy15191        173 LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS----DKT-------NG-VHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----~~~-------~~-~~~~~v~~~~~~~~~~~  240 (312)
                      .+.+...|.+++|+|++-+|++|+.|+..++|...-...- .-..+    .+.       .. ...+.+..+.|+|+|..
T Consensus       142 kkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vd-ekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~  220 (361)
T KOG1523|consen  142 KKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVD-EKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNR  220 (361)
T ss_pred             CCccccceeeeeccCCcceecccccCcceeEEEEeeeccc-cCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCE
Confidence            3357889999999999999999999999999975421100 00000    000       01 15678999999999999


Q ss_pred             EEEeccCCeEEEEecCCCC
Q psy15191        241 FLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       241 l~s~~~dg~i~iwd~~~~~  259 (312)
                      |+-.+.|..+.+-|...+.
T Consensus       221 lawv~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  221 LAWVGHDSTVSFVDAAGPS  239 (361)
T ss_pred             eeEecCCCceEEeecCCCc
Confidence            9999999999999877663

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.73  E-value=2e-13  Score=115.03  Aligned_cols=268  Identities=26%  Similarity=0.372  Sum_probs=188.0

Q ss_pred             ceEeCCC-CeEEEEeccCCCceEEEEEeCC--------------------CCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191          7 DVVNGEG-GKVLYTLTNHKSKVMAVKWNGE--------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         7 ~v~~~~~-~~~~~~~~~h~~~v~~~~w~~~--------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      .+|+... ...+..+..|...|..+.|.+.                    .+..+..+.+|...|.+++|+|+      +
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~  210 (466)
T COG2319         137 KLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPD------G  210 (466)
T ss_pred             EEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCC------c
Confidence            4566665 6667777777777776665443                    34567788889999999999988      6


Q ss_pred             c-eEEEecCCCcEEEeeecCCcccc-------cc-cccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         66 K-DLVSCSLDKTAILWKYVSEGNYL-------PY-HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        66 ~-~l~s~~~dg~i~vw~~~~~~~~~-------~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      . .+++++.|+.|++||...+....       .. ...+.+++..+++++.|+.+++|+...... .....     ..|.
T Consensus       211 ~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~-----~~~~  284 (466)
T COG2319         211 GLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSS-LLRTL-----SGHS  284 (466)
T ss_pred             ceEEEEecCCCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCc-EEEEE-----ecCC
Confidence            6 56666999999999877544422       00 113455666888999999999999987544 11111     3568


Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRL  212 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~  212 (312)
                      ..+.++.|+|++..+++++.++.+.+ +..+........  .|...+..+.+.+++..++.+ ..|+.+.+|+.......
T Consensus       285 ~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  364 (466)
T COG2319         285 SSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPL  364 (466)
T ss_pred             ccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCcee
Confidence            88999999998888888888888788 555555444444  677789999994343556555 67889999999877622


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEE-eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLT-ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ....        ....+..+.+.+ ...++. +..++.+.+|+.....            .......+...+....++++
T Consensus       365 ~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~  423 (466)
T COG2319         365 KTLE--------GHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGS------------LLRNLDGHTSRVTSLDFSPD  423 (466)
T ss_pred             EEec--------CCceEEEEEECC-CCCEEEEecCCCceEEEecccCe------------eeeeccCCCCcEEEEEECCC
Confidence            2222        222278889988 544444 6889999999998763            22222222278899999999


Q ss_pred             CCeEEEEecCCCcccceEEeC
Q psy15191        292 GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       292 ~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..+++++.++     .+++|
T Consensus       424 ~~~~~~~~~~~-----~~~~~  439 (466)
T COG2319         424 GKSLASGSSDN-----TIRLW  439 (466)
T ss_pred             CcEEEEecCCC-----cEEEE
Confidence            99999985444     48877

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.72  E-value=1.5e-15  Score=112.74  Aligned_cols=149  Identities=19%  Similarity=0.329  Sum_probs=99.8

Q ss_pred             eEEEECCCCCeEEEeec-----C-----CeEEE---ecccCceeeeecccCCceeEEEECCCCCEEEEE--ecCCeEEEE
Q psy15191        140 YGCKFGPRGDYIIAHGF-----Q-----GSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV--SRDRRWGLY  204 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~-----~-----~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~w  204 (312)
                      ..+.|+|+|+.|++-..     .     +...+   +..............++|.+++|+|+|+.|++.  ..++.|.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            35789999988775433     1     11222   222222211111345579999999999987654  456899999


Q ss_pred             EccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc---CCeEEEEecCCCCCCcccccccccceeEEeeccCc
Q psy15191        205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY  281 (312)
Q Consensus       205 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (312)
                      |++ .+.+..+         ....++.+.|+|+|++|++++.   .|.|.+||+....            .+.... | .
T Consensus        89 d~~-~~~i~~~---------~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~------------~i~~~~-~-~  144 (194)
T PF08662_consen   89 DVK-GKKIFSF---------GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK------------KISTFE-H-S  144 (194)
T ss_pred             cCc-ccEeEee---------cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE------------Eeeccc-c-C
Confidence            997 3333333         2345678999999999999874   4679999998542            344332 3 3


Q ss_pred             ceeEEEeccCCCeEEEEecC-CCcccceEEeC
Q psy15191        282 EIYSLAASHDGTLLASACKA-TKPEHAAIIIW  312 (312)
Q Consensus       282 ~v~~~~~s~~~~~l~s~s~d-~~~~dg~i~iW  312 (312)
                      .++.++|+|||++|+++... +...|..++||
T Consensus       145 ~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw  176 (194)
T PF08662_consen  145 DATDVEWSPDGRYLATATTSPRLRVDNGFKIW  176 (194)
T ss_pred             cEEEEEEcCCCCEEEEEEeccceeccccEEEE
Confidence            47899999999999999764 22346668887

>KOG1445|consensus

Probab=99.72  E-value=1.7e-16  Score=129.78  Aligned_cols=181  Identities=16%  Similarity=0.187  Sum_probs=136.9

Q ss_pred             cCCCcEEEeeecCCccc------------ccccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         72 SLDKTAILWKYVSEGNY------------LPYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        72 ~~dg~i~vw~~~~~~~~------------~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      +.-|.|-||+++....+            .+.-.++.| +...|++++.||.|++|.+..+........+...+..|...
T Consensus       600 g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eK  679 (1012)
T KOG1445|consen  600 GSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEK  679 (1012)
T ss_pred             CCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccce
Confidence            55689999999765431            222222222 33489999999999999998765544445555566788999


Q ss_pred             eeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE-EEE
Q psy15191        139 FYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL-SLV  215 (312)
Q Consensus       139 v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~  215 (312)
                      |+++.|+| ....|++++.|-+|++ |+.+......+.+|.+.|.+++|+|+|+.+++.+.||+|++|..++.... +.-
T Consensus       680 I~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg  759 (1012)
T KOG1445|consen  680 ITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEG  759 (1012)
T ss_pred             EEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccC
Confidence            99999999 5678899999999999 77777777788899999999999999999999999999999998865432 222


Q ss_pred             eccCCCCcccceeeEEEEEcCCCceEEEeccCC----eEEEEecCCC
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG----VCVVWGLGEP  258 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~  258 (312)
                      .++      ....-..+.|.-+|++++..+.|.    .|.+||...-
T Consensus       760 ~gp------vgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l  800 (1012)
T KOG1445|consen  760 KGP------VGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTL  800 (1012)
T ss_pred             CCC------ccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhc
Confidence            221      223334677888999998887665    6888886654

>KOG1517|consensus

Probab=99.72  E-value=2.2e-15  Score=129.88  Aligned_cols=235  Identities=14%  Similarity=0.201  Sum_probs=154.5

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc-------------ccCCCCCceEEEEeCCCcEEEE
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH-------------MRDDSKQLHLLSCSMDKSIIVW  114 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-------------~~~~~~~~~l~~~~~d~~i~i~  114 (312)
                      .+...+.|+|-      ...++++...-.|+|||.+.++.+.-+.             .-...+..++++++.||.|+||
T Consensus      1065 ~~pk~~~~hpf------~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIw 1138 (1387)
T KOG1517|consen 1065 QPPKTLKFHPF------EPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIW 1138 (1387)
T ss_pred             CCCceeeecCC------CceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEe
Confidence            34556777776      6788888877799999999887632221             1123455589999999999999


Q ss_pred             cCCCCc---ceeeeeee-e-cccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec------ccCCceeEE
Q psy15191        115 APDPTT---GLWLETAR-V-GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP------CHQLTITQL  183 (312)
Q Consensus       115 d~~~~~---~~~~~~~~-~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~------~~~~~v~~~  183 (312)
                      +--...   ...+.... + ....+..+.-.-+.|.....+|++++.-..|++    |+..++..      +....|+++
T Consensus      1139 k~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRI----WDa~~E~~~~diP~~s~t~vTaL 1214 (1387)
T KOG1517|consen 1139 KDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRI----WDAHKEQVVADIPYGSSTLVTAL 1214 (1387)
T ss_pred             cccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEE----EecccceeEeecccCCCccceee
Confidence            754321   11111100 0 011111111134677777677777777889999    66655443      344556666


Q ss_pred             EECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee--eEEEEEcCCCc-eEEEeccCCeEEEEecCCCC
Q psy15191        184 AFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI--IWGVAWSHDSR-YFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       184 ~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .-+. .|+.+++|..||.|++||.+...+-..+.....    |...  |..+.+-+.|- .|++|+.||.|++||++...
T Consensus      1215 S~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~----h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~ 1290 (1387)
T KOG1517|consen 1215 SADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYRE----HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSS 1290 (1387)
T ss_pred             cccccCCceEEEeecCCceEEeecccCCccccceeecc----cCCcccceeEEeecCCCcceeeeccCCeEEEEecccCc
Confidence            5443 579999999999999999987554221111111    4444  88999988765 49999999999999999863


Q ss_pred             CCcccccccccceeEEeecc---CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGH---GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...          ...+..|   .+.++++..+++...+|+|+. +.     |+||
T Consensus      1291 ~e~----------~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~-----ikIy 1330 (1387)
T KOG1517|consen 1291 KET----------FLTIVAHWEYGSALTALTVHEHAPIIASGSA-QL-----IKIY 1330 (1387)
T ss_pred             ccc----------cceeeeccccCccceeeeeccCCCeeeecCc-ce-----EEEE
Confidence            222          1122222   235899999999999999965 44     8887

>KOG0771|consensus

Probab=99.71  E-value=1.7e-16  Score=123.44  Aligned_cols=190  Identities=16%  Similarity=0.119  Sum_probs=130.7

Q ss_pred             ccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee
Q psy15191         93 MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ  171 (312)
Q Consensus        93 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~  171 (312)
                      ..+..++..+++++.||.+|+|+.....       .......|...|.++.|+|||++|++.+.| ..++ +..+.....
T Consensus       150 vaf~~~gs~latgg~dg~lRv~~~Ps~~-------t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a  221 (398)
T KOG0771|consen  150 VAFNGDGSKLATGGTDGTLRVWEWPSML-------TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA  221 (398)
T ss_pred             EEEcCCCCEeeeccccceEEEEecCcch-------hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence            4456777899999999999999955422       122234678899999999999999999999 7777 444442222


Q ss_pred             eec--ccCCceeEEEECCCC---CEEEE--EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        172 TLP--CHQLTITQLAFSPDD---THLVS--VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       172 ~~~--~~~~~v~~~~~~~~~---~~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                      ...  ..+.....+.|+.|+   .+++.  ...-+.|+.||+.....-..+...  ........|++++.+++|+++|.|
T Consensus       222 ~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~--~~~~~~~siSsl~VS~dGkf~AlG  299 (398)
T KOG0771|consen  222 RKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLR--KKIKRFKSISSLAVSDDGKFLALG  299 (398)
T ss_pred             hcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchh--hhhhccCcceeEEEcCCCcEEEEe
Confidence            222  233456677887766   33333  233466777776543321111111  011133469999999999999999


Q ss_pred             ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        245 SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       245 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      +.||.|-|++..+-..           ....-+.|...|+.+.|+|+.+++++.+.|.+
T Consensus       300 T~dGsVai~~~~~lq~-----------~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~  347 (398)
T KOG0771|consen  300 TMDGSVAIYDAKSLQR-----------LQYVKEAHLGFVTGLTFSPDSRYLASVSSDNE  347 (398)
T ss_pred             ccCCcEEEEEeceeee-----------eEeehhhheeeeeeEEEcCCcCcccccccCCc
Confidence            9999999999876531           22333579999999999999999999877655

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=2.4e-15  Score=126.22  Aligned_cols=196  Identities=17%  Similarity=0.164  Sum_probs=129.4

Q ss_pred             CCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCC---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         74 DKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMD---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        74 dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      +..|.+||.+....       ..+....++|++..++..+.+   ..|++||+.+++...+..     ..++   ...++
T Consensus       183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~-----~~g~---~~~~~  254 (429)
T PRK01742        183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVAS-----FRGH---NGAPA  254 (429)
T ss_pred             eEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEec-----CCCc---cCcee
Confidence            46899999765443       124455668889888887654   369999998754333221     1222   34679


Q ss_pred             ECCCCCeEEEee-cCCeEEE---ecccCceeeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCe-EEEEec
Q psy15191        144 FGPRGDYIIAHG-FQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGR-LSLVAC  217 (312)
Q Consensus       144 ~~~~~~~l~~~~-~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~-~~~~~~  217 (312)
                      |+|||+.|+.+. .+|.+.+   |+.+... ..+..+...+....|+|||+.|+..+ .++...+|++..... ...+. 
T Consensus       255 wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~-  332 (429)
T PRK01742        255 FSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVG-  332 (429)
T ss_pred             ECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEec-
Confidence            999999888765 5776554   5555443 33445666788999999999877655 578888888764322 22221 


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  297 (312)
                             +..  ....|+|+|++|+..+.++ +.+||+.++..             ..+..+ ....+++|+|+|++|++
T Consensus       333 -------~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~-------------~~lt~~-~~~~~~~~sPdG~~i~~  388 (429)
T PRK01742        333 -------GRG--YSAQISADGKTLVMINGDN-VVKQDLTSGST-------------EVLSST-FLDESPSISPNGIMIIY  388 (429)
T ss_pred             -------CCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCe-------------EEecCC-CCCCCceECCCCCEEEE
Confidence                   222  3478999999998887765 56699877631             112111 12356789999999999


Q ss_pred             EecCCC
Q psy15191        298 ACKATK  303 (312)
Q Consensus       298 ~s~d~~  303 (312)
                      ++.++.
T Consensus       389 ~s~~g~  394 (429)
T PRK01742        389 SSTQGL  394 (429)
T ss_pred             EEcCCC
Confidence            976654

>KOG2394|consensus

Probab=99.71  E-value=8.1e-16  Score=123.30  Aligned_cols=165  Identities=16%  Similarity=0.145  Sum_probs=114.4

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeee
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLET  126 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  126 (312)
                      ...|+|+.|.|.    . ...++.+-.+|.+.+||...............+++..+.....-+       ... .     
T Consensus       219 ktsvT~ikWvpg----~-~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ks-------k~~-r-----  280 (636)
T KOG2394|consen  219 KSSVTCIKWVPG----S-DSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKS-------KKT-R-----  280 (636)
T ss_pred             ccceEEEEEEeC----C-CceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeec-------ccc-C-----
Confidence            368999999997    3 345666678999999987332211111111122222332221110       000 0     


Q ss_pred             eeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEE
Q psy15191        127 ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       127 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd  205 (312)
                      .++....-....|..++|+|||++|++.+.||.+++ |..+.+++...+..-+...|++|+|||++|++|++|.-|.||.
T Consensus       281 NPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwS  360 (636)
T KOG2394|consen  281 NPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWS  360 (636)
T ss_pred             CccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEE
Confidence            011111112347889999999999999999999999 7777777777766778899999999999999999999999999


Q ss_pred             ccCCCeEEEEeccCCCCcccceeeEEEEEcC
Q psy15191        206 RQSSGRLSLVACSDKTNGVHKRIIWGVAWSH  236 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  236 (312)
                      +...+.+..-.+       |+.+|+.|+|.|
T Consensus       361 f~erRVVARGqG-------HkSWVs~VaFDp  384 (636)
T KOG2394|consen  361 FEERRVVARGQG-------HKSWVSVVAFDP  384 (636)
T ss_pred             eccceEEEeccc-------cccceeeEeecc
Confidence            987776655444       999999999984

>KOG0644|consensus

Probab=99.70  E-value=8.1e-17  Score=135.24  Aligned_cols=238  Identities=16%  Similarity=0.158  Sum_probs=167.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc--------ccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH--------MRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--------~~~~~~~~~l~  103 (312)
                      |+.+++.++..+.||.+.|+.++.+..      ...+++++.|..|++|.+..+..+.+..        ..++|    ..
T Consensus       217 wS~et~~~lAs~rGhs~ditdlavs~~------n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP----~~  286 (1113)
T KOG0644|consen  217 WSMETARCLASCRGHSGDITDLAVSSN------NTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSP----RA  286 (1113)
T ss_pred             eeccchhhhccCCCCccccchhccchh------hhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCc----cc
Confidence            888888999999999999999999887      7889999999999999999988754333        33343    23


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQL  183 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~  183 (312)
                      +.+.||++++||.+-...   ...+.........-+.++-|-..+..+++++.++....    |+.....- +...+.-+
T Consensus       287 sss~dgt~~~wd~r~~~~---~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n----~e~~~l~~-~~~~lif~  358 (1113)
T KOG0644|consen  287 SSSDDGTCRIWDARLEPR---IYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARN----HEFEQLAW-RSNLLIFV  358 (1113)
T ss_pred             cCCCCCceEecccccccc---ccCCCCCCcccccceeeeeccccccccccccCCccccc----chhhHhhh-hccceEEE
Confidence            778999999999882111   11111111122344666777778888899998888777    55543332 33333333


Q ss_pred             EECCCC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCCCCC
Q psy15191        184 AFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       184 ~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      ..+.+- .+.+++-.+-.+.+|++.++.......+       |...+..+.++|-+. ...+++.||...|||+-.+...
T Consensus       359 t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~g-------hsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pi  431 (1113)
T KOG0644|consen  359 TRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMG-------HSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPI  431 (1113)
T ss_pred             eccccccccceeeeeeeEeeeeecccchhhhhhcc-------cccceeeeeecCCCcHhhhhccCCCceEeeecccCCcc
Confidence            333322 4566677788899999998877766665       888899999999665 4558899999999999888542


Q ss_pred             cccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        262 EDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                                 -....+| ..+..-+||++|..++..     .+-|.++|
T Consensus       432 -----------k~y~~gh-~kl~d~kFSqdgts~~ls-----d~hgql~i  464 (1113)
T KOG0644|consen  432 -----------KHYFIGH-GKLVDGKFSQDGTSIALS-----DDHGQLYI  464 (1113)
T ss_pred             -----------eeeeccc-ceeeccccCCCCceEecC-----CCCCceEE
Confidence                       1122444 445677899999888877     44455655

>KOG1188|consensus

Probab=99.70  E-value=9.9e-16  Score=116.18  Aligned_cols=181  Identities=14%  Similarity=0.165  Sum_probs=130.2

Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeec--
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLP--  174 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--  174 (312)
                      ..++++...|.|++||..++  ..+..+     .++...+..+.|..  ....+.+|+.||.|++ |+++......+.  
T Consensus        41 ~~vav~lSngsv~lyd~~tg--~~l~~f-----k~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~  113 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTG--QLLEEF-----KGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWT  113 (376)
T ss_pred             eeEEEEecCCeEEEEeccch--hhhhee-----cCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheecc
Confidence            47899999999999999883  333333     36666777888876  5677999999999999 444443332222  


Q ss_pred             ccC-CceeEEEECCCCCEEEEEec----CCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCC-CceEEEeccC
Q psy15191        175 CHQ-LTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRD  247 (312)
Q Consensus       175 ~~~-~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d  247 (312)
                      .+. .+..+++.+-.++.+++|+.    +-.+.+||+|..++ +..+...      |...|+++.|+|. .++|++||.|
T Consensus       114 ~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eS------H~DDVT~lrFHP~~pnlLlSGSvD  187 (376)
T KOG1188|consen  114 QQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNES------HNDDVTQLRFHPSDPNLLLSGSVD  187 (376)
T ss_pred             CCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhh------ccCcceeEEecCCCCCeEEeeccc
Confidence            333 45677777667778887753    56799999998776 4333322      8999999999995 5789999999


Q ss_pred             CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCC
Q psy15191        248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKAT  302 (312)
Q Consensus       248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~  302 (312)
                      |.|.+||+.......         .+.....|...|..+.|..++ +.|.+-+...
T Consensus       188 GLvnlfD~~~d~EeD---------aL~~viN~~sSI~~igw~~~~ykrI~clTH~E  234 (376)
T KOG1188|consen  188 GLVNLFDTKKDNEED---------ALLHVINHGSSIHLIGWLSKKYKRIMCLTHME  234 (376)
T ss_pred             ceEEeeecCCCcchh---------hHHHhhcccceeeeeeeecCCcceEEEEEccC
Confidence            999999998774332         344445678889999998887 3455554433

>KOG2111|consensus

Probab=99.69  E-value=2.2e-13  Score=102.78  Aligned_cols=218  Identities=15%  Similarity=0.269  Sum_probs=143.3

Q ss_pred             EEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCC
Q psy15191         29 AVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        29 ~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d  108 (312)
                      -+.||-...+++.++. ...+|.++.+.++        .|+..- ++.|.||...+.-.                     
T Consensus        77 viIWDD~k~~~i~el~-f~~~I~~V~l~r~--------riVvvl-~~~I~VytF~~n~k---------------------  125 (346)
T KOG2111|consen   77 VIIWDDLKERCIIELS-FNSEIKAVKLRRD--------RIVVVL-ENKIYVYTFPDNPK---------------------  125 (346)
T ss_pred             EEEEecccCcEEEEEE-eccceeeEEEcCC--------eEEEEe-cCeEEEEEcCCChh---------------------
Confidence            3558877777777776 4578888888776        444433 56788887653211                     


Q ss_pred             CcEEEEcCCC-CcceeeeeeeecccCCCccceeEEEECC--CCCeEEE-eecCCeEEE-ecccCce--eeeecccCCcee
Q psy15191        109 KSIIVWAPDP-TTGLWLETARVGEVGGNTLGFYGCKFGP--RGDYIIA-HGFQGSLHL-DVTTWKQ--IQTLPCHQLTIT  181 (312)
Q Consensus       109 ~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~-~~~~~~i~~-d~~~~~~--~~~~~~~~~~v~  181 (312)
                       .++..+... +++                 .  ++..|  +...|+. |-.-|.|.+ |+..-..  .....+|...|.
T Consensus       126 -~l~~~et~~NPkG-----------------l--C~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Ia  185 (346)
T KOG2111|consen  126 -LLHVIETRSNPKG-----------------L--CSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIA  185 (346)
T ss_pred             -heeeeecccCCCc-----------------e--EeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCcee
Confidence             122222221 111                 1  12222  2222222 345677888 6665444  356678999999


Q ss_pred             EEEECCCCCEEEEEecCCe-EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRR-WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      +++++.+|..+||+|..|+ |||||..+++.+..++...     ....|.+++|||++.+||++|..|+|+||.++....
T Consensus       186 cv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~-----d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~  260 (346)
T KOG2111|consen  186 CVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV-----DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTEN  260 (346)
T ss_pred             EEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC-----chheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCC
Confidence            9999999999999999998 7999999999998887543     456799999999999999999999999999987543


Q ss_pred             Ccc---ccc----------ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        261 EED---LVQ----------NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       261 ~~~---~~~----------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ...   ...          ...| .+..+.-..++..-++|-.+.+.++..+.|+.
T Consensus       261 ~~~~~SSl~~~~~~lpky~~S~w-S~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgs  315 (346)
T KOG2111|consen  261 TEDESSSLSFKRLVLPKYFSSEW-SFAKFQLPQGTQCIIAFGSETNTVIAICADGS  315 (346)
T ss_pred             Cccccccccccccccchhcccce-eEEEEEccCCCcEEEEecCCCCeEEEEEeCCc
Confidence            322   000          0112 22333334566677788777566666655553

>KOG1240|consensus

Probab=99.68  E-value=2.1e-14  Score=125.69  Aligned_cols=239  Identities=15%  Similarity=0.158  Sum_probs=161.2

Q ss_pred             CCceEeCCCCeEEEEeccCCCceEEEE--------------------EeCCC-------CceEEEEccccCcEEEEEEec
Q psy15191          5 PGDVVNGEGGKVLYTLTNHKSKVMAVK--------------------WNGEG-------GKVLYTLTNHKSKVMAVKWVL   57 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~h~~~v~~~~--------------------w~~~~-------~~~~~~~~~h~~~v~~~~~~~   57 (312)
                      |..-|++. |..++.+..|+..|..++                    |+...       .+...++.--...+.++...+
T Consensus      1030 p~~gW~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~ 1108 (1431)
T KOG1240|consen 1030 PPPGWNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG 1108 (1431)
T ss_pred             CCCCCCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc
Confidence            34446655 889999999998888777                    44321       112223333456788888888


Q ss_pred             CcCcCCCCceEEEecCCCcEEEeeecCCcc--c--------------ccc-cccC-CCCC-ceEEEEeCCCcEEEEcCCC
Q psy15191         58 NTSLDPEHKDLVSCSLDKTAILWKYVSEGN--Y--------------LPY-HMRD-DSKQ-LHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        58 ~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--~--------------~~~-~~~~-~~~~-~~l~~~~~d~~i~i~d~~~  118 (312)
                      .      +..+|.++.||.|++.+++....  .              .+. ..++ .... ..++.+...+.|..||+++
T Consensus      1109 ~------~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~ 1182 (1431)
T KOG1240|consen 1109 N------GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRM 1182 (1431)
T ss_pred             C------CCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchh
Confidence            7      88999999999999999876221  0              000 0011 1122 3678888889999999998


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec------ccCCceeEEEECCC---C
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP------CHQLTITQLAFSPD---D  189 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~------~~~~~v~~~~~~~~---~  189 (312)
                      ....+..+..     ...+.|++++.+|.+.++++|...|.+.+    |+++-...      .+..+++.+..+|-   .
T Consensus      1183 ~~~~w~lk~~-----~~hG~vTSi~idp~~~WlviGts~G~l~l----WDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~ 1253 (1431)
T KOG1240|consen 1183 RHDAWRLKNQ-----LRHGLVTSIVIDPWCNWLVIGTSRGQLVL----WDLRFRVPILSWEHPARAPIRHVWLCPTYPQE 1253 (1431)
T ss_pred             hhhHHhhhcC-----ccccceeEEEecCCceEEEEecCCceEEE----EEeecCceeecccCcccCCcceEEeeccCCCC
Confidence            6544443333     34577999999999999999999999999    77665433      45578888888772   3


Q ss_pred             CEEEEEe--cCCeEEEEEccCCCeEEEEecc-CCCCcc-----------cceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        190 THLVSVS--RDRRWGLYKRQSSGRLSLVACS-DKTNGV-----------HKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       190 ~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~-~~~~~~-----------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      ...++++  ..+.|.+|++.++.....+... ......           +.-.....++...+.++.+|+.|..|+.||.
T Consensus      1254 S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~ 1333 (1431)
T KOG1240|consen 1254 SVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDP 1333 (1431)
T ss_pred             ceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccC
Confidence            4555544  4688999999988766665544 111111           1112223344455678999999999999998


Q ss_pred             CCCC
Q psy15191        256 GEPP  259 (312)
Q Consensus       256 ~~~~  259 (312)
                      ..+.
T Consensus      1334 ~~p~ 1337 (1431)
T KOG1240|consen 1334 TRPE 1337 (1431)
T ss_pred             CCcc
Confidence            7654

>KOG1310|consensus

Probab=99.68  E-value=1.3e-15  Score=122.60  Aligned_cols=216  Identities=16%  Similarity=0.112  Sum_probs=146.3

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEEEEe
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSCS  106 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~~  106 (312)
                      +...|.||++.|++++|+.+      |.+|++||.|-.+.|||....+.            +.+.|++.. +...+++|+
T Consensus        42 lE~eL~GH~GCVN~LeWn~d------G~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~t-nnriv~sgA  114 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNAD------GELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYT-NNRIVLSGA  114 (758)
T ss_pred             hhhhhccccceecceeecCC------CCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccC-CCeEEEecc
Confidence            45678999999999999999      99999999999999999765443            344555544 345899999


Q ss_pred             CCCcEEEEcCCCCcceee---eeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCceeee---------
Q psy15191        107 MDKSIIVWAPDPTTGLWL---ETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQT---------  172 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~---------  172 (312)
                      .|..|+++|+...++...   ..........|...|..++..|++ ..+.++++||.++- |++.-..-..         
T Consensus       115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~  194 (758)
T KOG1310|consen  115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILV  194 (758)
T ss_pred             CcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHH
Confidence            999999999986332211   111222334577788889999988 77899999999998 5554211100         


Q ss_pred             -ecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCe------------------EEEEeccCCCCcc-----cce
Q psy15191        173 -LPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGR------------------LSLVACSDKTNGV-----HKR  227 (312)
Q Consensus       173 -~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~------------------~~~~~~~~~~~~~-----~~~  227 (312)
                       ....--...++.++| +..+|+.|+.|-..++||.+...+                  ...+.........     ...
T Consensus       195 ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~  274 (758)
T KOG1310|consen  195 NYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYIT  274 (758)
T ss_pred             HhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccccccccee
Confidence             001223467899999 556889999999999999543111                  1111100000000     112


Q ss_pred             eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCC
Q psy15191        228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      .++-++|+|+|.-|+..-..-.|+++|+......
T Consensus       275 ~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~  308 (758)
T KOG1310|consen  275 CCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP  308 (758)
T ss_pred             eeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence            3567899999987666555557999999877543

>KOG1334|consensus

Probab=99.67  E-value=6.9e-16  Score=122.26  Aligned_cols=266  Identities=19%  Similarity=0.257  Sum_probs=182.1

Q ss_pred             EEeccCCCceEEEE-------------------EeCCCCceEEEE-ccccCcEEEEEEecCcCcCCCCceEEEecCCCcE
Q psy15191         18 YTLTNHKSKVMAVK-------------------WNGEGGKVLYTL-TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTA   77 (312)
Q Consensus        18 ~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i   77 (312)
                      ..|..|.+.|..|.                   |+...++....+ .+|...|....|.|.    .+...+++++.||.+
T Consensus       136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~----s~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPF----SGDRTIVTSSRDGQV  211 (559)
T ss_pred             hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCC----CCCcCceeccccCce
Confidence            34556666666665                   555555555554 479999999999987    445779999999999


Q ss_pred             EEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         78 ILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        78 ~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      ++=.+.....              ..+...+.++.  .|.+++.|+.+.-+|++..........+... ....-..++++
T Consensus       212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~--~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~-~~~~v~L~~Ia  288 (559)
T KOG1334|consen  212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPK--PFLSCGEDAVVFHIDLRQDVPAEKFVCREAD-EKERVGLYTIA  288 (559)
T ss_pred             eeeeeccccceecceecccccCccceeeecCCCCC--cccccccccceeeeeeccCCccceeeeeccC-CccceeeeeEe
Confidence            9877654332              12333344444  6899999999999999875443333221111 01123578899


Q ss_pred             ECCCCC-eEEEeecCCeEEE-ecccCcee------eeec------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        144 FGPRGD-YIIAHGFQGSLHL-DVTTWKQI------QTLP------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       144 ~~~~~~-~l~~~~~~~~i~~-d~~~~~~~------~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      .+|... .+++++.|..+++ |.+..+..      ..+.      ...-.|++++|+.++.-|+++-.|-.|++|.-..+
T Consensus       289 ~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~  368 (559)
T KOG1334|consen  289 VDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMG  368 (559)
T ss_pred             cCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccc
Confidence            999655 7899999999998 55544332      1221      22346899999988888888888999999953321


Q ss_pred             Ce------------EE-EEeccCCCCcccceeeEEEE-EcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        210 GR------------LS-LVACSDKTNGVHKRIIWGVA-WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       210 ~~------------~~-~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      .-            .. .+++..     ....|.++- |-|...|+++|+.-|.|.||+-.++.            .+..
T Consensus       369 ~G~~p~~~s~~~~~~k~vYKGHr-----N~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~e------------ii~~  431 (559)
T KOG1334|consen  369 DGSEPDPSSPREQYVKRVYKGHR-----NSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGE------------IIRF  431 (559)
T ss_pred             cCCCCCCCcchhhccchhhcccc-----cccccceeeeccCccceEEecCccceEEEEecchhH------------HHHH
Confidence            11            00 011111     223466665 46889999999999999999977663            5666


Q ss_pred             eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.+-..-|++|.-+|.-..||+.|-|..     |+||
T Consensus       432 MegDr~VVNCLEpHP~~PvLAsSGid~D-----VKIW  463 (559)
T KOG1334|consen  432 MEGDRHVVNCLEPHPHLPVLASSGIDHD-----VKIW  463 (559)
T ss_pred             hhcccceEeccCCCCCCchhhccCCccc-----eeee
Confidence            6666668999999999999999966665     9999

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1.6e-13  Score=115.08  Aligned_cols=222  Identities=9%  Similarity=-0.002  Sum_probs=145.9

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec---CCCcEEEeeecCCcccc-------cccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS---LDKTAILWKYVSEGNYL-------PYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~---~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~  101 (312)
                      ++.++... +.+..+...+.+.+|+|+      |+.|+..+   .+..|.+|++.+++...       .....++|++..
T Consensus       184 ~d~dg~~~-~~lt~~~~~~~~p~wSPD------G~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~  256 (429)
T PRK03629        184 SDYDGYNQ-FVVHRSPQPLMSPAWSPD------GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK  256 (429)
T ss_pred             EcCCCCCC-EEeecCCCceeeeEEcCC------CCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCE
Confidence            45554433 444556678999999999      88887654   24579999998775422       122345788887


Q ss_pred             EEEE-eCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-Ce--EEE-ecccCceeeeec
Q psy15191        102 LLSC-SMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-GS--LHL-DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~~~-~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~--i~~-d~~~~~~~~~~~  174 (312)
                      |+.. +.++  .|.+||+.+++...+        ..+...+....|+|+|+.|+..+.+ +.  +.. |+.+.+.. .+.
T Consensus       257 La~~~~~~g~~~I~~~d~~tg~~~~l--------t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt  327 (429)
T PRK03629        257 LAFALSKTGSLNLYVMDLASGQIRQV--------TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RIT  327 (429)
T ss_pred             EEEEEcCCCCcEEEEEECCCCCEEEc--------cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Eee
Confidence            7754 4444  488899887432211        1223456788999999988877654 33  443 65554433 222


Q ss_pred             ccCCceeEEEECCCCCEEEEEecC---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe--
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV--  249 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--  249 (312)
                      ..........|+|||++|+..+.+   ..|.+||+.++... .+...      .  ......|+|||++|+.++.++.  
T Consensus       328 ~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~------~--~~~~p~~SpDG~~i~~~s~~~~~~  398 (429)
T PRK03629        328 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT------F--LDETPSIAPNGTMVIYSSSQGMGS  398 (429)
T ss_pred             cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC------C--CCCCceECCCCCEEEEEEcCCCce
Confidence            233445678999999999876644   35888998876543 33321      1  1235689999999999887763  


Q ss_pred             -EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        250 -CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       250 -i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                       +.++++...             ....+.+|.+.+...+|+|-
T Consensus       399 ~l~~~~~~G~-------------~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        399 VLNLVSTDGR-------------FKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             EEEEEECCCC-------------CeEECccCCCCcCCcccCCC
Confidence             677777543             45667778888999999983

>KOG0649|consensus

Probab=99.67  E-value=2.8e-13  Score=98.57  Aligned_cols=193  Identities=16%  Similarity=0.098  Sum_probs=138.6

Q ss_pred             CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------------ccccccc
Q psy15191         36 GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------------YLPYHMR   94 (312)
Q Consensus        36 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------------~~~~~~~   94 (312)
                      +...+...++|.++|+.++|..+        +|++|+ ||.|+=|..+....                     ..+..+.
T Consensus        51 gk~~iv~eqahdgpiy~~~f~d~--------~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~  121 (325)
T KOG0649|consen   51 GKLKIVPEQAHDGPIYYLAFHDD--------FLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMW  121 (325)
T ss_pred             CCcceeeccccCCCeeeeeeehh--------heeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeE
Confidence            34456667899999999999855        777776 59999987654332                     0122222


Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~  173 (312)
                      ..|..+-++.++.|+.++-||+++++.  ...     +.+|...+.++.--.....+++|++||.+++ |.++.+.+..+
T Consensus       122 ldP~enSi~~AgGD~~~y~~dlE~G~i--~r~-----~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i  194 (325)
T KOG0649|consen  122 LDPSENSILFAGGDGVIYQVDLEDGRI--QRE-----YRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI  194 (325)
T ss_pred             eccCCCcEEEecCCeEEEEEEecCCEE--EEE-----EcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEe
Confidence            244555677777999999999998543  222     3499999999998666667999999999999 77777666554


Q ss_pred             c---------cc-CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        174 P---------CH-QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       174 ~---------~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      .         .| ...|.+++.  +..+|++| ....+.+|.++..+....++        ...++..+.|.  ...+++
T Consensus       195 e~yk~~~~lRp~~g~wigala~--~edWlvCG-gGp~lslwhLrsse~t~vfp--------ipa~v~~v~F~--~d~vl~  261 (325)
T KOG0649|consen  195 EPYKNPNLLRPDWGKWIGALAV--NEDWLVCG-GGPKLSLWHLRSSESTCVFP--------IPARVHLVDFV--DDCVLI  261 (325)
T ss_pred             ccccChhhcCcccCceeEEEec--cCceEEec-CCCceeEEeccCCCceEEEe--------cccceeEeeee--cceEEE
Confidence            4         12 223555554  56677765 46679999999999888887        45557778884  456788


Q ss_pred             eccCCeEEEEecCC
Q psy15191        244 ISRDGVCVVWGLGE  257 (312)
Q Consensus       244 ~~~dg~i~iwd~~~  257 (312)
                      +++.+.|.-|.+..
T Consensus       262 ~G~g~~v~~~~l~G  275 (325)
T KOG0649|consen  262 GGEGNHVQSYTLNG  275 (325)
T ss_pred             eccccceeeeeecc
Confidence            88888899997754

>KOG4497|consensus

Probab=99.67  E-value=6.4e-14  Score=106.22  Aligned_cols=236  Identities=15%  Similarity=0.239  Sum_probs=161.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~  103 (312)
                      |+....+-...+......+.+++|+|+      |+ .|.+...|-.|.||.+.+....       .+.-..+++++.+.+
T Consensus        76 wsl~Qpew~ckIdeg~agls~~~WSPd------grhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~a  149 (447)
T KOG4497|consen   76 WSLVQPEWYCKIDEGQAGLSSISWSPD------GRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCA  149 (447)
T ss_pred             EEeecceeEEEeccCCCcceeeeECCC------cceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceee
Confidence            666555666677777889999999999      74 5667778999999999887652       222233455555444


Q ss_pred             EEeCC------------------------------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC
Q psy15191        104 SCSMD------------------------------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR  147 (312)
Q Consensus       104 ~~~~d------------------------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  147 (312)
                      .+++-                                    ..+.+||.--.-       ++.. -.....+..++|+|.
T Consensus       150 i~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Ley-------kv~a-Ye~~lG~k~v~wsP~  221 (447)
T KOG4497|consen  150 ILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEY-------KVYA-YERGLGLKFVEWSPC  221 (447)
T ss_pred             eeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhh-------eeee-eeeccceeEEEeccc
Confidence            44321                                    122333321100       0000 012245778999999


Q ss_pred             CCeEEEeecCCeEEE-ecccCceeeeec----------------------------------------------------
Q psy15191        148 GDYIIAHGFQGSLHL-DVTTWKQIQTLP----------------------------------------------------  174 (312)
Q Consensus       148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~----------------------------------------------------  174 (312)
                      +++|++|+.|+.+++ +--+|+....+.                                                    
T Consensus       222 ~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~  301 (447)
T KOG4497|consen  222 NQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMT  301 (447)
T ss_pred             cceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhc
Confidence            999999999999998 666676443321                                                    


Q ss_pred             --------------ccCCceeEEEECCCCCEEEEEecC--CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        175 --------------CHQLTITQLAFSPDDTHLVSVSRD--RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       175 --------------~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                                    .....+.-++|++|..+++|-...  +.+-+||++..+....+.        ...+|....|+|..
T Consensus       302 pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi--------Qk~piraf~WdP~~  373 (447)
T KOG4497|consen  302 PVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI--------QKHPIRAFEWDPGR  373 (447)
T ss_pred             ceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh--------hccceeEEEeCCCC
Confidence                          112235578999999999886543  679999999766554444        56779999999999


Q ss_pred             ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      ..|+.+.....+++|.....             ......+..-.|..+.|+.+|..++-.+.|.
T Consensus       374 prL~vctg~srLY~W~psg~-------------~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDa  424 (447)
T KOG4497|consen  374 PRLVVCTGKSRLYFWAPSGP-------------RVVGVPKKGFNIQKLQWLQPGEFIVLCGKDA  424 (447)
T ss_pred             ceEEEEcCCceEEEEcCCCc-------------eEEecCCCCceeeeEEecCCCcEEEEEcCCc
Confidence            88888887778999976543             3333444557899999999999999986653

>KOG1587|consensus

Probab=99.65  E-value=6.8e-14  Score=117.55  Aligned_cols=199  Identities=15%  Similarity=0.146  Sum_probs=139.4

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------------cccccccCCCCCce
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------------YLPYHMRDDSKQLH  101 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------------~~~~~~~~~~~~~~  101 (312)
                      .|..+|+.+.|..+    +.+.-+++++.||.|..|+++.-..                       ..+.+.+..+  ..
T Consensus       289 sh~~~v~~vvW~~~----~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p--~~  362 (555)
T KOG1587|consen  289 SHSEPVTAVVWLQN----EHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDP--NH  362 (555)
T ss_pred             cCCcCeEEEEEecc----CCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCC--ce
Confidence            58899999999887    4345699999999999998765332                       1222222233  37


Q ss_pred             EEEEeCCCcEEEEcCCCCccee-eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCcee------eeec
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLW-LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQI------QTLP  174 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~------~~~~  174 (312)
                      ++.|+.+|.|.--+....+... ..-.....+..|.++|+++.++|=+..++..+.|..++|    |...      ..+.
T Consensus       363 FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vri----Ws~~~~~~Pl~~~~  438 (555)
T KOG1587|consen  363 FIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRI----WSEDVIASPLLSLD  438 (555)
T ss_pred             EEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEe----ccccCCCCcchhhh
Confidence            9999999998873333221111 111122234568889999999997766555555999999    6654      2333


Q ss_pred             ccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        175 CHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       175 ~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      .+...+++++|||- ...|+++..||.|.+||+.....-.......     .....+.+.|++.|+.|+.|...|.+++|
T Consensus       439 ~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~-----~~~~l~~~~~s~~g~~lavGd~~G~~~~~  513 (555)
T KOG1587|consen  439 SSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKV-----CSPALTRVRWSPNGKLLAVGDANGTTHIL  513 (555)
T ss_pred             hccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccc-----cccccceeecCCCCcEEEEecCCCcEEEE
Confidence            56777999999994 4577788889999999998644332222211     34556778899999999999999999999


Q ss_pred             ecCCC
Q psy15191        254 GLGEP  258 (312)
Q Consensus       254 d~~~~  258 (312)
                      ++...
T Consensus       514 ~l~~~  518 (555)
T KOG1587|consen  514 KLSES  518 (555)
T ss_pred             EcCch
Confidence            99654

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=2.5e-13  Score=114.32  Aligned_cols=221  Identities=14%  Similarity=0.059  Sum_probs=142.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCccccc-------ccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNYLP-------YHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~~~-------~~~~~~~~~~~  101 (312)
                      |+.++ ...+.+..+...+.+.+|+|+      |+.|+..+.+   ..|.+||+.+++...+       ....+++++..
T Consensus       189 ~D~~g-~~~~~lt~~~~~v~~p~wSpD------g~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~  261 (433)
T PRK04922        189 ADSDG-YNPQTILRSAEPILSPAWSPD------GKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRR  261 (433)
T ss_pred             ECCCC-CCceEeecCCCccccccCCCC------CCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCE
Confidence            66654 444556667788999999999      8888877643   4699999987765221       23345778876


Q ss_pred             EE-EEeCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCe--EEE-ecccCceeeeec
Q psy15191        102 LL-SCSMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGS--LHL-DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~--i~~-d~~~~~~~~~~~  174 (312)
                      ++ +.+.++  .|++||+.+++...   .     ..+.......+|+|+|+.++..+. +|.  +.+ ++.+.+.... .
T Consensus       262 l~~~~s~~g~~~Iy~~d~~~g~~~~---l-----t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l-t  332 (433)
T PRK04922        262 LALTLSRDGNPEIYVMDLGSRQLTR---L-----TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL-T  332 (433)
T ss_pred             EEEEEeCCCCceEEEEECCCCCeEE---C-----ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-e
Confidence            65 445555  58899988754211   1     122333456899999998887664 443  444 6555443322 2


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCC---eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC---C
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDR---RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD---G  248 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g  248 (312)
                      .+.......+|+|||++++..+.++   .|.+||+.+++.. .+..        ........|+|||++|+..+.+   +
T Consensus       333 ~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~--------~~~~~~p~~spdG~~i~~~s~~~g~~  403 (433)
T PRK04922        333 FQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTP--------GSLDESPSFAPNGSMVLYATREGGRG  403 (433)
T ss_pred             cCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCC--------CCCCCCceECCCCCEEEEEEecCCce
Confidence            2233445789999999998765443   5999999766543 2221        1123356899999988876653   3


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  290 (312)
                      .|.++++...             ....+..+.+.+...+|+|
T Consensus       404 ~L~~~~~~g~-------------~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        404 VLAAVSTDGR-------------VRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             EEEEEECCCC-------------ceEEcccCCCCCCCCccCC
Confidence            6777777543             3444555566778888887

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=2.3e-13  Score=114.27  Aligned_cols=224  Identities=13%  Similarity=0.070  Sum_probs=140.5

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCcccc-------cccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNYL-------PYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~~-------~~~~~~~~~~~~  101 (312)
                      ++.+ +...+.+..+...+.+.+|+|+      |+.|+..+.+   ..|.+||+.+++...       .....++|++..
T Consensus       181 ~D~d-G~~~~~l~~~~~~v~~p~wSPD------G~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~  253 (427)
T PRK02889        181 SDAD-GQNAQSALSSPEPIISPAWSPD------GTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRT  253 (427)
T ss_pred             ECCC-CCCceEeccCCCCcccceEcCC------CCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCE
Confidence            4553 4555566677888999999999      8888876643   359999998876522       223456788877


Q ss_pred             EE-EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEE---ecccCceeeeeccc
Q psy15191        102 LL-SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL---DVTTWKQIQTLPCH  176 (312)
Q Consensus       102 l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~---d~~~~~~~~~~~~~  176 (312)
                      ++ +.+.++...+|.++...... ..     +..+........|+|||+.++..+. ++...+   +..+....... ..
T Consensus       254 la~~~~~~g~~~Iy~~d~~~~~~-~~-----lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt-~~  326 (427)
T PRK02889        254 LAVALSRDGNSQIYTVNADGSGL-RR-----LTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVT-FT  326 (427)
T ss_pred             EEEEEccCCCceEEEEECCCCCc-EE-----CCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEe-cC
Confidence            76 56778876666543221211 11     1123334556789999998886654 344444   44443332222 12


Q ss_pred             CCceeEEEECCCCCEEEEEecCC---eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC---eE
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDR---RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG---VC  250 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i  250 (312)
                      ........|+|||++|+..+.++   .|.+||+.+.+.......         .......|+|||++|+.++.++   .+
T Consensus       327 g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~---------~~~~~p~~spdg~~l~~~~~~~g~~~l  397 (427)
T PRK02889        327 GSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT---------TRDESPSFAPNGRYILYATQQGGRSVL  397 (427)
T ss_pred             CCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC---------CCccCceECCCCCEEEEEEecCCCEEE
Confidence            23345678999999998877654   599999987654332211         1234679999999988777544   35


Q ss_pred             EEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      .+.++...             ....+..+.+.+...+|+|-
T Consensus       398 ~~~~~~g~-------------~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        398 AAVSSDGR-------------IKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             EEEECCCC-------------ceEEeecCCCCCCCCccCCC
Confidence            55555322             34445556677888899874

>KOG2111|consensus

Probab=99.64  E-value=5.6e-13  Score=100.59  Aligned_cols=221  Identities=14%  Similarity=0.150  Sum_probs=137.2

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCC------CcEE
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMD------KSII  112 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d------~~i~  112 (312)
                      ...+++|+.+      ...++.|..+| .+||+.+.-+.          ..+.-+-+-. +.+.+.|+.+      ..|.
T Consensus         7 ~~lsvs~NQD------~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~-N~laLVGGg~~pky~pNkvi   78 (346)
T KOG2111|consen    7 KTLSVSFNQD------HSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRS-NYLALVGGGSRPKYPPNKVI   78 (346)
T ss_pred             ceeEEEEccC------CceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhh-ceEEEecCCCCCCCCCceEE
Confidence            3455888777      66777776555 89999876333          1111111111 1133444433      5799


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-e-cccCceeeeec--ccCCceeEEEECCC
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-D-VTTWKQIQTLP--CHQLTITQLAFSPD  188 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d-~~~~~~~~~~~--~~~~~v~~~~~~~~  188 (312)
                      |||-..  ..++..+      ....+|.++.+.++-  +++. ..+.|.+ . ..+-+....+.  .....+.+++-+.+
T Consensus        79 IWDD~k--~~~i~el------~f~~~I~~V~l~r~r--iVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~  147 (346)
T KOG2111|consen   79 IWDDLK--ERCIIEL------SFNSEIKAVKLRRDR--IVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSN  147 (346)
T ss_pred             EEeccc--CcEEEEE------EeccceeeEEEcCCe--EEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCC
Confidence            999433  2222222      234678888887653  4333 3456666 1 11122222222  12233444443334


Q ss_pred             CCEEEE-EecCCeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe-EEEEecCCCCCCccc
Q psy15191        189 DTHLVS-VSRDRRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV-CVVWGLGEPPTEEDL  264 (312)
Q Consensus       189 ~~~l~~-~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~  264 (312)
                      ..+|+. |-.-|.|.|-|+...+.  ...+..       |...|.+++++.+|..+|++|..|+ |||||..++.     
T Consensus       148 k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~A-------H~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~-----  215 (346)
T KOG2111|consen  148 KSLLAFPGFKTGQVQIVDLASTKPNAPSIINA-------HDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGT-----  215 (346)
T ss_pred             ceEEEcCCCccceEEEEEhhhcCcCCceEEEc-------ccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCc-----
Confidence            445554 34569999999987655  234443       9999999999999999999999995 8999999985     


Q ss_pred             ccccccceeEEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                             .+.++..  ....|++++|||++.+||++     ++.|+|.|+
T Consensus       216 -------~l~E~RRG~d~A~iy~iaFSp~~s~Lavs-----SdKgTlHiF  253 (346)
T KOG2111|consen  216 -------LLQELRRGVDRADIYCIAFSPNSSWLAVS-----SDKGTLHIF  253 (346)
T ss_pred             -------EeeeeecCCchheEEEEEeCCCccEEEEE-----cCCCeEEEE
Confidence                   4555543  34579999999999999999     555558874

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.63  E-value=6.5e-14  Score=103.97  Aligned_cols=111  Identities=21%  Similarity=0.342  Sum_probs=84.7

Q ss_pred             ccceeEEEECCCCCeEEEe--ecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC---CeEEEEEccCC
Q psy15191        136 TLGFYGCKFGPRGDYIIAH--GFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSS  209 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~--~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~  209 (312)
                      ..+|.+++|+|+++.+++.  ..+..+.+ |.+ .+.+..+  +...++.+.|+|+|++|++++.+   |.|.+||.++.
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~  135 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK  135 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            3469999999999987654  35667888 554 4444444  35678899999999999998754   67999999976


Q ss_pred             CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc------CCeEEEEecCCC
Q psy15191        210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR------DGVCVVWGLGEP  258 (312)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~  258 (312)
                      +.+....        |. .++.++|+|+|++|+++..      |+.++||++...
T Consensus       136 ~~i~~~~--------~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  136 KKISTFE--------HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             EEeeccc--------cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence            6665443        33 3689999999999998864      788999998543

>KOG2321|consensus

Probab=99.63  E-value=7e-14  Score=113.28  Aligned_cols=235  Identities=10%  Similarity=0.076  Sum_probs=159.5

Q ss_pred             cccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      +|...-+.|..+|+      |+|+ |||-.--.|++||+.+-..-        .+.+.+.+.+-..++.--.|+.|-+-.
T Consensus        49 e~p~ast~ik~s~D------GqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHa  122 (703)
T KOG2321|consen   49 EMPTASTRIKVSPD------GQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHA  122 (703)
T ss_pred             CCccccceeEecCC------CcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehh
Confidence            36778889999998      8875 56667779999999765431        122222233333334444445444332


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEEC-CCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFG-PRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      ...   . -...++.      ..-..++++ |...++++|+.....++++..+..+..+....+.++++..++-..+|++
T Consensus       123 k~G---~-hy~~RIP------~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~  192 (703)
T KOG2321|consen  123 KYG---R-HYRTRIP------KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLAC  192 (703)
T ss_pred             hcC---e-eeeeecC------cCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEe
Confidence            111   0 0111111      123456665 3556666666666677799999999999877789999999998889999


Q ss_pred             EecCCeEEEEEccCCCeEEEEeccCCCCc----ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccc
Q psy15191        195 VSRDRRWGLYKRQSSGRLSLVACSDKTNG----VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      |+.+|.|.+||.+.......+........    .....|+++.|+.+|-.++.|..+|.|.|||++...+          
T Consensus       193 Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p----------  262 (703)
T KOG2321|consen  193 GTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP----------  262 (703)
T ss_pred             cccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc----------
Confidence            99999999999999887777765544211    1234599999999999999999999999999998743          


Q ss_pred             ceeEEeeccCcceeEEEeccC--CCeEEEEecCCCcccceEEeC
Q psy15191        271 PEVQKLYGHGYEIYSLAASHD--GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~~~~s~~--~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .+..-.+...+|..+.|.+.  ++.+++.      +...++||
T Consensus       263 -l~~kdh~~e~pi~~l~~~~~~~q~~v~S~------Dk~~~kiW  299 (703)
T KOG2321|consen  263 -LLVKDHGYELPIKKLDWQDTDQQNKVVSM------DKRILKIW  299 (703)
T ss_pred             -eeecccCCccceeeecccccCCCceEEec------chHHhhhc
Confidence             33334455678999999776  3455554      23346666

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.61  E-value=7e-12  Score=102.34  Aligned_cols=273  Identities=13%  Similarity=0.115  Sum_probs=159.3

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----   88 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----   88 (312)
                      +.+.+......+.|.-  .|..+.+.+.++......-..+.|+|+      |+++++++.||.|.++|+.+.+..     
T Consensus         5 ~~l~~V~~~~~~~v~v--iD~~t~~~~~~i~~~~~~h~~~~~s~D------gr~~yv~~rdg~vsviD~~~~~~v~~i~~   76 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAV--IDGATNKVVARIPTGGAPHAGLKFSPD------GRYLYVANRDGTVSVIDLATGKVVATIKV   76 (369)
T ss_dssp             GGEEEEEEGGGTEEEE--EETTT-SEEEEEE-STTEEEEEE-TT-------SSEEEEEETTSEEEEEETTSSSEEEEEE-
T ss_pred             ccEEEEEecCCCEEEE--EECCCCeEEEEEcCCCCceeEEEecCC------CCEEEEEcCCCeEEEEECCcccEEEEEec
Confidence            3445544444555533  588889999999865544455778888      999999999999999999998863     


Q ss_pred             --ccccccCCCCCceEEEE-eCCCcEEEEcCCCCcceeeeeeeecccC--CCccceeEEEECCCCCeEEEee-cCCeEEE
Q psy15191         89 --LPYHMRDDSKQLHLLSC-SMDKSIIVWAPDPTTGLWLETARVGEVG--GNTLGFYGCKFGPRGDYIIAHG-FQGSLHL  162 (312)
Q Consensus        89 --~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~  162 (312)
                        .......++++.+++++ ...+.+.++|.++.+  .+...+.....  .....+.++..+|....++..- +.+.+.+
T Consensus        77 G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle--~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~v  154 (369)
T PF02239_consen   77 GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE--PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWV  154 (369)
T ss_dssp             SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT----EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEE
T ss_pred             CCCcceEEEcCCCCEEEEEecCCCceeEecccccc--ceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEE
Confidence              23334446788777765 578999999998844  33444332222  2455678888888888655554 4577777


Q ss_pred             -ecccCceee-eecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCC------------------
Q psy15191        163 -DVTTWKQIQ-TLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKT------------------  221 (312)
Q Consensus       163 -d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~------------------  221 (312)
                       |....+... .............|+|++++++.+ ..++.|-++|..+.+....+......                  
T Consensus       155 Vdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~  234 (369)
T PF02239_consen  155 VDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWA  234 (369)
T ss_dssp             EETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEE
T ss_pred             EEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEe
Confidence             655543322 222344567789999999987665 45678888888875544433211000                  


Q ss_pred             -----------------C-cc-----------cceeeEEEEEcCCCceEEEe----ccCCeEEEEecCCCCCCccccccc
Q psy15191        222 -----------------N-GV-----------HKRIIWGVAWSHDSRYFLTI----SRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       222 -----------------~-~~-----------~~~~v~~~~~~~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                                       . ..           ..+.-..+..+|+++++...    ...+.|.++|..+..         
T Consensus       235 ~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~---------  305 (369)
T PF02239_consen  235 TSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK---------  305 (369)
T ss_dssp             EEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE---------
T ss_pred             eccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcc---------
Confidence                             0 00           11112345678899999887    445789999988762         


Q ss_pred             ccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        269 LWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       269 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                         .+..+.. ....+..+.|+++|+.+-.+..++.   +.|.|
T Consensus       306 ---~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~---~~i~v  343 (369)
T PF02239_consen  306 ---VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGN---GAIVV  343 (369)
T ss_dssp             ---EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--T---TEEEE
T ss_pred             ---eeEEEeccCCCcEeccEECCCCCEEEEEEecCC---CEEEE
Confidence               3444432 2335889999999998777765432   35655

...

>KOG4497|consensus

Probab=99.61  E-value=1.3e-14  Score=109.99  Aligned_cols=264  Identities=16%  Similarity=0.222  Sum_probs=164.1

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCce-EEEecCCCcEEEeeecCCcc--
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD-LVSCSLDKTAILWKYVSEGN--   87 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-l~s~~~dg~i~vw~~~~~~~--   87 (312)
                      ...|+.++.+....-    +.=|.++.+..+.+.. -+.|.-+.|..+      ..+ |.....|+.|.+|++...+-  
T Consensus        17 Sp~g~yiAs~~~yrl----viRd~~tlq~~qlf~c-ldki~yieW~ad------s~~ilC~~yk~~~vqvwsl~Qpew~c   85 (447)
T KOG4497|consen   17 SPCGNYIASLSRYRL----VIRDSETLQLHQLFLC-LDKIVYIEWKAD------SCHILCVAYKDPKVQVWSLVQPEWYC   85 (447)
T ss_pred             CCCCCeeeeeeeeEE----EEeccchhhHHHHHHH-HHHhhheeeecc------ceeeeeeeeccceEEEEEeecceeEE
Confidence            445666666553321    1133333333333322 356778889877      444 44557888999999987654  


Q ss_pred             ------cccccccCCCCCce-EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeE
Q psy15191         88 ------YLPYHMRDDSKQLH-LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL  160 (312)
Q Consensus        88 ------~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i  160 (312)
                            ..+....++|++.. +.+...+-.|.+|.+.+.++..+.-        ....+..++|+|+|++.+.++.....
T Consensus        86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~--------pK~~~kg~~f~~dg~f~ai~sRrDCk  157 (447)
T KOG4497|consen   86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH--------PKTNVKGYAFHPDGQFCAILSRRDCK  157 (447)
T ss_pred             EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc--------cccCceeEEECCCCceeeeeecccHH
Confidence                  34556667888854 5566678899999999866544322        23345778999999988877653221


Q ss_pred             ---EE-ecccCceeeeec--------------------------------ccCCceeEEEECCCCCEEEEEecCCeEEEE
Q psy15191        161 ---HL-DVTTWKQIQTLP--------------------------------CHQLTITQLAFSPDDTHLVSVSRDRRWGLY  204 (312)
Q Consensus       161 ---~~-d~~~~~~~~~~~--------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w  204 (312)
                         .+ .-+.|.+.+.+.                                .-.-.+..++|+|.+++|+.|+.|+.+|+-
T Consensus       158 dyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvl  237 (447)
T KOG4497|consen  158 DYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVL  237 (447)
T ss_pred             HHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhh
Confidence               11 223333333222                                112457788999999999999999998876


Q ss_pred             EccCC------------------------------------------------------------CeEEEEeccCCCCcc
Q psy15191        205 KRQSS------------------------------------------------------------GRLSLVACSDKTNGV  224 (312)
Q Consensus       205 d~~~~------------------------------------------------------------~~~~~~~~~~~~~~~  224 (312)
                      +--+-                                                            ..+..++.+..... 
T Consensus       238 nh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pn-  316 (447)
T KOG4497|consen  238 NHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPN-  316 (447)
T ss_pred             ceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCC-
Confidence            54430                                                            00111111111111 


Q ss_pred             cceeeEEEEEcCCCceEEEeccC--CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        225 HKRIIWGVAWSHDSRYFLTISRD--GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      ....+.-++|++|..|+++-...  +.+.+||+....             +..+--...+|....|.|.-..|+.+....
T Consensus       317 Pk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~-------------l~avLiQk~piraf~WdP~~prL~vctg~s  383 (447)
T KOG4497|consen  317 PKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLK-------------LHAVLIQKHPIRAFEWDPGRPRLVVCTGKS  383 (447)
T ss_pred             cccccceeeecCCceEEeeecCCCCceEEEEechhhh-------------hhhhhhhccceeEEEeCCCCceEEEEcCCc
Confidence            34456779999999999987543  589999998762             333334567899999999887777764333


Q ss_pred             CcccceEEeC
Q psy15191        303 KPEHAAIIIW  312 (312)
Q Consensus       303 ~~~dg~i~iW  312 (312)
                      .     +++|
T Consensus       384 r-----LY~W  388 (447)
T KOG4497|consen  384 R-----LYFW  388 (447)
T ss_pred             e-----EEEE
Confidence            3     7776

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=5.9e-13  Score=111.69  Aligned_cols=197  Identities=12%  Similarity=0.053  Sum_probs=125.2

Q ss_pred             cEEEeeecCCccc-------ccccccCCCCCceEEEEe---CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         76 TAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCS---MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        76 ~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      .|.++|.+.....       ......++|++..|+..+   .+..|.+|++.+++...+..     ..+   .....+|+
T Consensus       180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~-----~~~---~~~~~~~S  251 (429)
T PRK03629        180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-----FPR---HNGAPAFS  251 (429)
T ss_pred             eEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccC-----CCC---CcCCeEEC
Confidence            6888887655431       234455678888887654   23578999988754332221     112   23467999


Q ss_pred             CCCCeEEEe-ecCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-Ce--EEEEEccCCCeEEEEecc
Q psy15191        146 PRGDYIIAH-GFQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-RR--WGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       146 ~~~~~l~~~-~~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~--i~~wd~~~~~~~~~~~~~  218 (312)
                      |||+.|+.. ..+|  .|.+ |+.+.+..... .+...+....|+|||+.|+..+.+ +.  |+++|+.+.... .+.. 
T Consensus       252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt-~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~-  328 (429)
T PRK03629        252 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITW-  328 (429)
T ss_pred             CCCCEEEEEEcCCCCcEEEEEECCCCCEEEcc-CCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Eeec-
Confidence            999988865 3444  4666 77766554333 344567889999999988877654 44  444566554433 2222 


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL  295 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  295 (312)
                            .........|+|||++|+..+.+   ..|.+||+.++.             ...+.. ........|+|||++|
T Consensus       329 ------~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~-------------~~~Lt~-~~~~~~p~~SpDG~~i  388 (429)
T PRK03629        329 ------EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-------------VQVLTD-TFLDETPSIAPNGTMV  388 (429)
T ss_pred             ------CCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC-------------eEEeCC-CCCCCCceECCCCCEE
Confidence                  22234568899999998876543   368889987762             222322 1223467899999999


Q ss_pred             EEEecCCC
Q psy15191        296 ASACKATK  303 (312)
Q Consensus       296 ~s~s~d~~  303 (312)
                      +.++.++.
T Consensus       389 ~~~s~~~~  396 (429)
T PRK03629        389 IYSSSQGM  396 (429)
T ss_pred             EEEEcCCC
Confidence            99987654

>KOG2139|consensus

Probab=99.61  E-value=3.6e-13  Score=103.41  Aligned_cols=237  Identities=16%  Similarity=0.179  Sum_probs=148.0

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--------cccccccCCCCC-ceEEEEeCCCcEEEEcCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQ-LHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~  117 (312)
                      +..+..++|++.      -..+|++..|-.|++||-.....        ..+.++.+-|.+ ..|+.++..| |.+|...
T Consensus        98 ~~dlr~~aWhqH------~~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s  170 (445)
T KOG2139|consen   98 EIDLRGVAWHQH------IIAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDS  170 (445)
T ss_pred             hcceeeEeechh------hhhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcC
Confidence            345778899887      56789999999999999766332        234444444432 2566666655 8899765


Q ss_pred             CCcceee-------eeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEE-ecccCceeeeecccCCceeEEEECCC
Q psy15191        118 PTTGLWL-------ETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD  188 (312)
Q Consensus       118 ~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~  188 (312)
                      ..-....       ....+...++| .+|+++.|++||..+++++. +..|.+ |..+.....-.....+.+.-+.||||
T Consensus       171 ~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPd  249 (445)
T KOG2139|consen  171 RTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPD  249 (445)
T ss_pred             cccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCC
Confidence            4211111       01112222344 68999999999999998875 557888 44443333333345567889999999


Q ss_pred             CCEEEEEecCCeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc-c
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV-Q  266 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~  266 (312)
                      +.+|++++-|+..++|..... ....-..        ..+.|...+|+|+|++|+-+... .-++|.+.......... .
T Consensus       250 gd~lfaAt~davfrlw~e~q~wt~erw~l--------gsgrvqtacWspcGsfLLf~~sg-sp~lysl~f~~~~~~~~~~  320 (445)
T KOG2139|consen  250 GDVLFAATCDAVFRLWQENQSWTKERWIL--------GSGRVQTACWSPCGSFLLFACSG-SPRLYSLTFDGEDSVFLRP  320 (445)
T ss_pred             CCEEEEecccceeeeehhcccceecceec--------cCCceeeeeecCCCCEEEEEEcC-CceEEEEeecCCCccccCc
Confidence            999999999999999965432 2222222        34478899999999976644432 34456554332221111 1


Q ss_pred             ccccc--eeEEee------c---cCcceeEEEeccCCCeEEEEec
Q psy15191        267 NTLWP--EVQKLY------G---HGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       267 ~~~~~--~~~~~~------~---~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ...|.  .+..+.      +   -.+++.+++|.|.|.+||+.-+
T Consensus       321 ~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fK  365 (445)
T KOG2139|consen  321 QSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFK  365 (445)
T ss_pred             ccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEc
Confidence            11111  111111      1   2467889999999999998744

>KOG1272|consensus

Probab=99.61  E-value=6.9e-15  Score=116.05  Aligned_cols=256  Identities=13%  Similarity=0.103  Sum_probs=176.9

Q ss_pred             CCCCceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeee
Q psy15191          3 SEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY   82 (312)
Q Consensus         3 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~   82 (312)
                      +.|-.+-...+|+.+. +.|.++.|-++  |..++++...+.- ...|..+.|..+      .+++|.+ ....+.|||-
T Consensus       130 FGPY~~~ytrnGrhll-lgGrKGHlAa~--Dw~t~~L~~Ei~v-~Etv~Dv~~LHn------eq~~AVA-QK~y~yvYD~  198 (545)
T KOG1272|consen  130 FGPYHLDYTRNGRHLL-LGGRKGHLAAF--DWVTKKLHFEINV-METVRDVTFLHN------EQFFAVA-QKKYVYVYDN  198 (545)
T ss_pred             cCCeeeeecCCccEEE-ecCCccceeee--ecccceeeeeeeh-hhhhhhhhhhcc------hHHHHhh-hhceEEEecC
Confidence            4455666677788764 66777877555  5556777777764 467999999887      5566655 5568999997


Q ss_pred             cCCcc---------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE
Q psy15191         83 VSEGN---------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA  153 (312)
Q Consensus        83 ~~~~~---------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  153 (312)
                      ..-+.         ..+-|++++   -+|++++..|.++.-|+.+++.  +..+.     ...+.+..++-+|-...+-+
T Consensus       199 ~GtElHClk~~~~v~rLeFLPyH---fLL~~~~~~G~L~Y~DVS~Gkl--Va~~~-----t~~G~~~vm~qNP~NaVih~  268 (545)
T KOG1272|consen  199 NGTELHCLKRHIRVARLEFLPYH---FLLVAASEAGFLKYQDVSTGKL--VASIR-----TGAGRTDVMKQNPYNAVIHL  268 (545)
T ss_pred             CCcEEeehhhcCchhhhcccchh---heeeecccCCceEEEeechhhh--hHHHH-----ccCCccchhhcCCccceEEE
Confidence            65544         233444444   3788899999999999998543  22222     34456777889999999999


Q ss_pred             eecCCeEEEecccCceee-----eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee
Q psy15191        154 HGFQGSLHLDVTTWKQIQ-----TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       154 ~~~~~~i~~d~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  228 (312)
                      |..+|.|.+    |.+..     .+..|.++|.++++.++|+|++|.+.|..++|||++....+..+..        ..+
T Consensus       269 GhsnGtVSl----WSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t--------p~~  336 (545)
T KOG1272|consen  269 GHSNGTVSL----WSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT--------PHP  336 (545)
T ss_pred             cCCCceEEe----cCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec--------CCC
Confidence            999999999    65543     4458999999999999999999999999999999998876666553        233


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ...+++|..|  +++.+....|.||.=........       ...+--....++|.++.|.|-...|-.|..
T Consensus       337 a~~ls~Sqkg--lLA~~~G~~v~iw~d~~~~s~~~-------~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~  399 (545)
T KOG1272|consen  337 ASNLSLSQKG--LLALSYGDHVQIWKDALKGSGHG-------ETPYMNHRCGGPVEDLRFCPYEDVLGIGHA  399 (545)
T ss_pred             cccccccccc--ceeeecCCeeeeehhhhcCCCCC-------CcchhhhccCcccccceeccHHHeeecccc
Confidence            5568887655  33445555799994322211000       001111112458899999997766665543

>KOG3881|consensus

Probab=99.61  E-value=9e-14  Score=107.52  Aligned_cols=186  Identities=9%  Similarity=0.117  Sum_probs=137.8

Q ss_pred             eEEEecCCCcEEEeeecCCcc-----c------ccccccCCC-CCceEEEEeCC--CcEEEEcCCCCcceeeeeeeeccc
Q psy15191         67 DLVSCSLDKTAILWKYVSEGN-----Y------LPYHMRDDS-KQLHLLSCSMD--KSIIVWAPDPTTGLWLETARVGEV  132 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~-----~------~~~~~~~~~-~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~  132 (312)
                      .|++|-.+|.+++|....+..     .      .+..+...+ ....+++|+..  ..+.+||+...+..+.........
T Consensus       117 ~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~  196 (412)
T KOG3881|consen  117 TLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDR  196 (412)
T ss_pred             EEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCcc
Confidence            688889999999999885442     1      111111122 22366779988  889999999865444333222221


Q ss_pred             CCCc--cceeEEEECCC--CCeEEEeecCCeEEE-ecccC-ceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191        133 GGNT--LGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTW-KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKR  206 (312)
Q Consensus       133 ~~~~--~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~  206 (312)
                      .+-.  -.++++.|-+.  ...|++++.-+.+++ |.+.. +++..+.-...+++++...|+++++++|..-+.+..||+
T Consensus       197 L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~  276 (412)
T KOG3881|consen  197 LGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDL  276 (412)
T ss_pred             ccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecc
Confidence            1222  23567888887  788999999999999 55533 344455556788999999999999999999999999999


Q ss_pred             cCCCeEEE-EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        207 QSSGRLSL-VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       207 ~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +.+..... +.+       ..+.|.++..+|..++|++++-|..|||+|+.+..
T Consensus       277 r~~kl~g~~~kg-------~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrk  323 (412)
T KOG3881|consen  277 RGGKLLGCGLKG-------ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRK  323 (412)
T ss_pred             cCceeeccccCC-------ccCCcceEEEcCCCceEEeeccceeEEEeecccch
Confidence            98777655 333       67789999999999999999999999999998853

>KOG2139|consensus

Probab=99.61  E-value=8.6e-14  Score=106.74  Aligned_cols=185  Identities=16%  Similarity=0.197  Sum_probs=129.8

Q ss_pred             ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-eccc
Q psy15191         89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTT  166 (312)
Q Consensus        89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~  166 (312)
                      .+....+++.-..++++..|-.|++|+-.......+.       ......|.+++|-|. +..|++|+..|...+ +.++
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~ksst~pt~Lk-------s~sQrnvtclawRPlsaselavgCr~gIciW~~s~t  172 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLK-------SVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRT  172 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCCCCCceec-------chhhcceeEEEeccCCcceeeeeecceeEEEEcCcc
Confidence            3344455555556889999999999987762211111       124567999999995 456777877776666 3333


Q ss_pred             Cceeee-------------ecccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191        167 WKQIQT-------------LPCHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       167 ~~~~~~-------------~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                      ...-..             -.+| .+|++|.|++||..+++++. |..|.|||..++........       ..+.++-+
T Consensus       173 ln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~-------glgg~slL  244 (445)
T KOG2139|consen  173 LNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPK-------GLGGFSLL  244 (445)
T ss_pred             cccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccccc-------CCCceeeE
Confidence            332221             1144 68999999999999999885 57799999998776655422       45568889


Q ss_pred             EEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        233 AWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       233 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      .||||+.+|+++.-|+..++|.....           |....-..+ .+.|....|+|+|++|..++.
T Consensus       245 kwSPdgd~lfaAt~davfrlw~e~q~-----------wt~erw~lg-sgrvqtacWspcGsfLLf~~s  300 (445)
T KOG2139|consen  245 KWSPDGDVLFAATCDAVFRLWQENQS-----------WTKERWILG-SGRVQTACWSPCGSFLLFACS  300 (445)
T ss_pred             EEcCCCCEEEEecccceeeeehhccc-----------ceecceecc-CCceeeeeecCCCCEEEEEEc
Confidence            99999999999999999999965432           222222222 448999999999998776653

>KOG0644|consensus

Probab=99.61  E-value=1.7e-15  Score=127.47  Aligned_cols=223  Identities=21%  Similarity=0.287  Sum_probs=163.9

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCc
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      -++.+.+|.++|.|+.|...      |.++++|+.|..++||..++..+.        .+.-.+.+.++.++++++.|..
T Consensus       182 ~ikrLlgH~naVyca~fDrt------g~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~v  255 (1113)
T KOG0644|consen  182 NIKRLLGHRNAVYCAIFDRT------GRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKV  255 (1113)
T ss_pred             HHHHHHhhhhheeeeeeccc------cceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCce
Confidence            34567789999999999998      999999999999999999887763        3334444556668899999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCcee----eeec-----ccCCcee
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQI----QTLP-----CHQLTIT  181 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~----~~~~-----~~~~~v~  181 (312)
                      |++|.+..+.       ++..+.+|.+.|++++|+|-.    +.+.||.+++    |+..    ....     .....+.
T Consensus       256 IrvWrl~~~~-------pvsvLrghtgavtaiafsP~~----sss~dgt~~~----wd~r~~~~~y~prp~~~~~~~~~~  320 (1113)
T KOG0644|consen  256 IRVWRLPDGA-------PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRI----WDARLEPRIYVPRPLKFTEKDLVD  320 (1113)
T ss_pred             EEEEecCCCc-------hHHHHhccccceeeeccCccc----cCCCCCceEe----ccccccccccCCCCCCccccccee
Confidence            9999998743       333445899999999999965    7789999999    5544    1111     2335567


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      ++.|-.++..++|++.|+.-..|.+.....             +...+.-+.++.+ ..+.+++-.+..+.+|++.++. 
T Consensus       321 s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~-------------~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~-  386 (1113)
T KOG0644|consen  321 SILFENNGDRFLTGSRDGEARNHEFEQLAW-------------RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQ-  386 (1113)
T ss_pred             eeeccccccccccccCCcccccchhhHhhh-------------hccceEEEeccccccccceeeeeeeEeeeeecccch-
Confidence            778888888999999999988887653111             1111111222222 2466777778889999998874 


Q ss_pred             CcccccccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                                 ....+.+|...+..+.++|-.. ...+++.     ||.+.||
T Consensus       387 -----------l~H~l~ghsd~~yvLd~Hpfn~ri~msag~-----dgst~iw  423 (1113)
T KOG0644|consen  387 -----------LLHNLMGHSDEVYVLDVHPFNPRIAMSAGY-----DGSTIIW  423 (1113)
T ss_pred             -----------hhhhhcccccceeeeeecCCCcHhhhhccC-----CCceEee
Confidence                       5677789999999999999654 4456744     4448888

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.60  E-value=7e-11  Score=96.53  Aligned_cols=265  Identities=15%  Similarity=0.123  Sum_probs=161.3

Q ss_pred             CCCceEEEEEeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecC----CCcEEEeeecCC--cc--------
Q psy15191         23 HKSKVMAVKWNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSL----DKTAILWKYVSE--GN--------   87 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----dg~i~vw~~~~~--~~--------   87 (312)
                      ..+.|+.+.+|.+++++...-. .-......++++|+      +++|.+...    ++.|..|++...  ..        
T Consensus        11 ~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~------~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~   84 (345)
T PF10282_consen   11 KGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPD------GRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPS   84 (345)
T ss_dssp             SSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TT------SSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEE
T ss_pred             CCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeC------CCEEEEEEccccCCCCEEEEEECCCcceeEEeeeecc
Confidence            4567888889888887643321 23455677888888      788877765    578999998875  22        


Q ss_pred             --cccccccCCCCCceEEEEe-CCCcEEEEcCCCCcceeeee-eee------cccCCCccceeEEEECCCCCeEEEeec-
Q psy15191         88 --YLPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLWLET-ARV------GEVGGNTLGFYGCKFGPRGDYIIAHGF-  156 (312)
Q Consensus        88 --~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~-~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~-  156 (312)
                        ........++++.+++++. .+|.|.++++.......... ...      .........+.++.++|+++++++... 
T Consensus        85 ~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG  164 (345)
T PF10282_consen   85 GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG  164 (345)
T ss_dssp             SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred             CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence              1223344466777776665 68999999998742111111 110      001123456788999999999887653 


Q ss_pred             CCeEEE-ecccCc--eee--eec-ccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccC-CCeEEEEeccCCC--Ccccc
Q psy15191        157 QGSLHL-DVTTWK--QIQ--TLP-CHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQS-SGRLSLVACSDKT--NGVHK  226 (312)
Q Consensus       157 ~~~i~~-d~~~~~--~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~-~~~~~~~~~~~~~--~~~~~  226 (312)
                      ...|.+ +.....  +..  .+. ......+.++|+|++++++... .++.|.++++.. ...+.........  .....
T Consensus       165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~  244 (345)
T PF10282_consen  165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGE  244 (345)
T ss_dssp             TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSS
T ss_pred             CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccccccc
Confidence            334555 443322  322  222 3455678999999999887665 568899999982 2222222211110  11122


Q ss_pred             eeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        227 RIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       227 ~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      .....++++|||++|+++. ..+.|.+|++......        .+.+..+.......+.++++|+|++|+++..+
T Consensus       245 ~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~--------l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~  312 (345)
T PF10282_consen  245 NAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGT--------LTLVQTVPTGGKFPRHFAFSPDGRYLYVANQD  312 (345)
T ss_dssp             SSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTT--------EEEEEEEEESSSSEEEEEE-TTSSEEEEEETT
T ss_pred             CCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCc--------eEEEEEEeCCCCCccEEEEeCCCCEEEEEecC
Confidence            3577899999999887765 5668999999433111        01344444445558999999999999998743

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG3881|consensus

Probab=99.60  E-value=2e-13  Score=105.70  Aligned_cols=232  Identities=15%  Similarity=0.133  Sum_probs=162.6

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc----cccC--------CCCCceEEEEeCCCcEEE
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY----HMRD--------DSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~----~~~~--------~~~~~~l~~~~~d~~i~i  113 (312)
                      -...|.+++|.-+    ++...|..++.|..+....+.........    ..+.        ......|++|-.+|.+.+
T Consensus        54 ~~~ris~l~~~~d----~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~  129 (412)
T KOG3881|consen   54 ELDRISSLLFGVD----GETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQV  129 (412)
T ss_pred             hhhhhhhheeecC----CceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEE
Confidence            4567888888866    55666777667777777777665543221    1111        123347999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeE-EEeecC--CeEEEecccCceeeeec--------------cc
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI-IAHGFQ--GSLHLDVTTWKQIQTLP--------------CH  176 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~--~~i~~d~~~~~~~~~~~--------------~~  176 (312)
                      |..+.+.........   . .....+..+.-++....+ ++|+..  ..+.+    |++....+              .-
T Consensus       130 ~~~k~~d~hss~l~~---l-a~g~g~~~~r~~~~~p~Iva~GGke~~n~lki----wdle~~~qiw~aKNvpnD~L~LrV  201 (412)
T KOG3881|consen  130 RHDKSGDLHSSKLIK---L-ATGPGLYDVRQTDTDPYIVATGGKENINELKI----WDLEQSKQIWSAKNVPNDRLGLRV  201 (412)
T ss_pred             EeccCCcccccccee---e-ecCCceeeeccCCCCCceEecCchhcccceee----eecccceeeeeccCCCCcccccee
Confidence            998853311100011   0 112346666667755554 558877  66777    55444322              12


Q ss_pred             CCceeEEEECCC--CCEEEEEecCCeEEEEEccCCCeE-EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        177 QLTITQLAFSPD--DTHLVSVSRDRRWGLYKRQSSGRL-SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       177 ~~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      .-.++++.|-+.  ...|++++.-+.+++||.+.+++. ..+..       .+.+++++...|.++++++|..-|.+..|
T Consensus       202 PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~-------~E~~is~~~l~p~gn~Iy~gn~~g~l~~F  274 (412)
T KOG3881|consen  202 PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDF-------LENPISSTGLTPSGNFIYTGNTKGQLAKF  274 (412)
T ss_pred             eeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEecc-------ccCcceeeeecCCCcEEEEecccchhhee
Confidence            335678899887  889999999999999999976543 33333       56789999999999999999999999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++.+..           ....+.+-.+.|+++..+|.+++||++|.|+-     |||+
T Consensus       275 D~r~~kl-----------~g~~~kg~tGsirsih~hp~~~~las~GLDRy-----vRIh  317 (412)
T KOG3881|consen  275 DLRGGKL-----------LGCGLKGITGSIRSIHCHPTHPVLASCGLDRY-----VRIH  317 (412)
T ss_pred             cccCcee-----------eccccCCccCCcceEEEcCCCceEEeecccee-----EEEe
Confidence            9998743           33447788999999999999999999977666     8874

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=2.4e-12  Score=108.60  Aligned_cols=221  Identities=14%  Similarity=0.129  Sum_probs=141.4

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC---CCcEEEeeecCCccc-------ccccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL---DKTAILWKYVSEGNY-------LPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~  101 (312)
                      ++.+ +...+.+..|...+.+.+|+|+      |+.|+..+.   +..|.+||+.+++..       ......++|++..
T Consensus       187 ~d~d-g~~~~~lt~~~~~v~~p~wSpD------G~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~  259 (435)
T PRK05137        187 MDQD-GANVRYLTDGSSLVLTPRFSPN------RQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRK  259 (435)
T ss_pred             ECCC-CCCcEEEecCCCCeEeeEECCC------CCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCE
Confidence            5554 4445667778889999999999      888887653   468999999877642       1223445788877


Q ss_pred             EE-EEeCCCc--EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC--eEEE-ecccCceeeeec
Q psy15191        102 LL-SCSMDKS--IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG--SLHL-DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-d~~~~~~~~~~~  174 (312)
                      ++ +.+.++.  |.+||+.+++...        +..+........|+|+|+.++..+. +|  .|.+ |....+... +.
T Consensus       260 la~~~~~~g~~~Iy~~d~~~~~~~~--------Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt  330 (435)
T PRK05137        260 VVMSLSQGGNTDIYTMDLRSGTTTR--------LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-IS  330 (435)
T ss_pred             EEEEEecCCCceEEEEECCCCceEE--------ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-ee
Confidence            65 5555655  6777877643211        1123344566899999999887663 33  4555 665554433 22


Q ss_pred             ccCCceeEEEECCCCCEEEEEecC---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC----
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD----  247 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----  247 (312)
                      .+...+....|+|||+.|+..+.+   ..|.+||+..... ..+..        ...+..+.|+|||+.|+..+.+    
T Consensus       331 ~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~--------~~~~~~p~~spDG~~i~~~~~~~~~~  401 (435)
T PRK05137        331 FGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS--------GFLVEGPTWAPNGRVIMFFRQTPGSG  401 (435)
T ss_pred             cCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC--------CCCCCCCeECCCCCEEEEEEccCCCC
Confidence            234556778999999999887654   3588888764432 33321        1135568999999988765542    


Q ss_pred             --CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        248 --GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       248 --g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                        ..++++|+....             ...+. ..+.+...+|+|-
T Consensus       402 ~~~~L~~~dl~g~~-------------~~~l~-~~~~~~~p~Wsp~  433 (435)
T PRK05137        402 GAPKLYTVDLTGRN-------------EREVP-TPGDASDPAWSPL  433 (435)
T ss_pred             CcceEEEEECCCCc-------------eEEcc-CCCCccCcccCCC
Confidence              257777775542             23333 2344667788773

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=8.9e-13  Score=110.71  Aligned_cols=197  Identities=14%  Similarity=0.033  Sum_probs=122.8

Q ss_pred             CcEEEeeecCCcc-------cccccccCCCCCceEEEEeCC---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         75 KTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMD---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        75 g~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      ..|.++|......       ..+....++|++..++..+.+   ..|.+||+.+++...+.        .........+|
T Consensus       176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~--------~~~g~~~~~~~  247 (427)
T PRK02889        176 YQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA--------NFKGSNSAPAW  247 (427)
T ss_pred             cEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee--------cCCCCccceEE
Confidence            3566666643321       123445567888888776643   35999999875433221        11233457899


Q ss_pred             CCCCCeEEE-eecCCeEEE---ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CCeEEEEEcc--CCCeEEEEec
Q psy15191        145 GPRGDYIIA-HGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQ--SSGRLSLVAC  217 (312)
Q Consensus       145 ~~~~~~l~~-~~~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~--~~~~~~~~~~  217 (312)
                      +|||+.|+. .+.++...+   |...... ..+..+........|+|||+.|+..+. ++...+|.+.  +... ..+..
T Consensus       248 SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~  325 (427)
T PRK02889        248 SPDGRTLAVALSRDGNSQIYTVNADGSGL-RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTF  325 (427)
T ss_pred             CCCCCEEEEEEccCCCceEEEEECCCCCc-EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEec
Confidence            999998874 566776555   5544432 333344555667899999998886654 4566666554  3332 22221


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCC---eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDG---VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                             ........+|+|+|++|+..+.++   .|.+||+..+.             ...+... .......|+|||++
T Consensus       326 -------~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~-------------~~~lt~~-~~~~~p~~spdg~~  384 (427)
T PRK02889        326 -------TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ-------------VTALTDT-TRDESPSFAPNGRY  384 (427)
T ss_pred             -------CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC-------------eEEccCC-CCccCceECCCCCE
Confidence                   112233578999999998776554   69999987763             2222222 23467899999999


Q ss_pred             EEEEecCC
Q psy15191        295 LASACKAT  302 (312)
Q Consensus       295 l~s~s~d~  302 (312)
                      |+.++.++
T Consensus       385 l~~~~~~~  392 (427)
T PRK02889        385 ILYATQQG  392 (427)
T ss_pred             EEEEEecC
Confidence            99987654

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=1.2e-12  Score=110.35  Aligned_cols=196  Identities=14%  Similarity=0.037  Sum_probs=125.3

Q ss_pred             CcEEEeeecCCccc-------ccccccCCCCCceEEEEeCC---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         75 KTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        75 g~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      ..|.+||.......       .+....+++++..++..+.+   ..|.+||+.+++...+.        .......+.+|
T Consensus       184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~--------~~~g~~~~~~~  255 (433)
T PRK04922        184 YALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA--------SFRGINGAPSF  255 (433)
T ss_pred             EEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec--------cCCCCccCceE
Confidence            35888887654431       23445668888888877643   46999999875432221        11223456899


Q ss_pred             CCCCCeEEE-eecCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CCe--EEEEEccCCCeEEEEec
Q psy15191        145 GPRGDYIIA-HGFQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DRR--WGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       145 ~~~~~~l~~-~~~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~~wd~~~~~~~~~~~~  217 (312)
                      +|+|+.++. .+.+|  .|.+ |+.+.+.. .+..+.......+|+|||+.|+..+. +|.  |+++|+.+.+... +..
T Consensus       256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~  333 (433)
T PRK04922        256 SPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTF  333 (433)
T ss_pred             CCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eec
Confidence            999998764 45555  4666 77666543 33345455567899999998887764 444  6666766554332 221


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCC---eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDG---VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                             .......++|+|+|++|+..+.++   .|.+||+.++.             ...+. +........|+|||++
T Consensus       334 -------~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~-------------~~~Lt-~~~~~~~p~~spdG~~  392 (433)
T PRK04922        334 -------QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS-------------VRTLT-PGSLDESPSFAPNGSM  392 (433)
T ss_pred             -------CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC-------------eEECC-CCCCCCCceECCCCCE
Confidence                   222234689999999998765433   69999987653             22232 2223456799999999


Q ss_pred             EEEEecC
Q psy15191        295 LASACKA  301 (312)
Q Consensus       295 l~s~s~d  301 (312)
                      |+..+.+
T Consensus       393 i~~~s~~  399 (433)
T PRK04922        393 VLYATRE  399 (433)
T ss_pred             EEEEEec
Confidence            8888765

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=4.8e-12  Score=106.78  Aligned_cols=197  Identities=12%  Similarity=0.074  Sum_probs=127.1

Q ss_pred             CcEEEeeecCCccc-------ccccccCCCCCceEEEEeC---CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         75 KTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSM---DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        75 g~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      ..|.++|.+.....       .+....+++++..|+..+.   +..|.+||+.+++...+.        .....+...+|
T Consensus       182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~--------~~~g~~~~~~~  253 (435)
T PRK05137        182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVG--------NFPGMTFAPRF  253 (435)
T ss_pred             eEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEee--------cCCCcccCcEE
Confidence            36777877554431       2344556788888877653   467999999875432221        23345667899


Q ss_pred             CCCCCeEE-EeecCCe--EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CC--eEEEEEccCCCeEEEEec
Q psy15191        145 GPRGDYII-AHGFQGS--LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DR--RWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       145 ~~~~~~l~-~~~~~~~--i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~  217 (312)
                      +|+|+.|+ +.+.++.  |.+ |+.+.... .+..+........|+|||+.|+..+. +|  .|+++|+....... +..
T Consensus       254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~  331 (435)
T PRK05137        254 SPDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISF  331 (435)
T ss_pred             CCCCCEEEEEEecCCCceEEEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eec
Confidence            99999876 4455554  555 76665543 34445556678999999998887764 33  58888877554433 322


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                             ....+....|+|+|++|+....+   ..|.+||+..+.             ...+. ....+..+.|+|||++
T Consensus       332 -------~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-------------~~~lt-~~~~~~~p~~spDG~~  390 (435)
T PRK05137        332 -------GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-------------ERILT-SGFLVEGPTWAPNGRV  390 (435)
T ss_pred             -------CCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-------------eEecc-CCCCCCCCeECCCCCE
Confidence                   22335567899999999876543   368888875442             12222 1234678899999999


Q ss_pred             EEEEecCC
Q psy15191        295 LASACKAT  302 (312)
Q Consensus       295 l~s~s~d~  302 (312)
                      |+..+.+.
T Consensus       391 i~~~~~~~  398 (435)
T PRK05137        391 IMFFRQTP  398 (435)
T ss_pred             EEEEEccC
Confidence            98876543

>KOG4227|consensus

Probab=99.56  E-value=8.9e-14  Score=107.85  Aligned_cols=166  Identities=14%  Similarity=0.152  Sum_probs=122.2

Q ss_pred             ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec-ccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc
Q psy15191         89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG-EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT  166 (312)
Q Consensus        89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~  166 (312)
                      ++..+.++.++..|++|+.|..+++|+++..-..... .++. .-..|...|.+++|+...+++++|+.++.|.+ |+++
T Consensus        58 CiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~-KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt  136 (609)
T KOG4227|consen   58 CINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTP-KPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET  136 (609)
T ss_pred             ccceeeeccCCeEEeecCCcceeeeechHHHHhhcCC-CCceeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc
Confidence            4455556777889999999999999998742111110 1111 11356789999999999999999999999999 8888


Q ss_pred             Cceeeeec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCC-ceEE
Q psy15191        167 WKQIQTLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFL  242 (312)
Q Consensus       167 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~  242 (312)
                      -+.+..+.  ...+.|..|..+|-.+.|++.+.++.|.+||.+... ....+-...     .......+.|+|.. .+|+
T Consensus       137 ~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN-----~~~~F~t~~F~P~~P~Li~  211 (609)
T KOG4227|consen  137 KQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPAN-----SGKNFYTAEFHPETPALIL  211 (609)
T ss_pred             ceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecC-----CCccceeeeecCCCceeEE
Confidence            77766554  234589999999999999999999999999998755 222222111     33446678899965 5677


Q ss_pred             EeccCCeEEEEecCCCCC
Q psy15191        243 TISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~  260 (312)
                      +.+..+-+.+||++.+..
T Consensus       212 ~~~~~~G~~~~D~R~~~~  229 (609)
T KOG4227|consen  212 VNSETGGPNVFDRRMQAR  229 (609)
T ss_pred             eccccCCCCceeeccccc
Confidence            888888899999987643

>KOG1354|consensus

Probab=99.52  E-value=2.4e-12  Score=98.36  Aligned_cols=233  Identities=16%  Similarity=0.142  Sum_probs=150.9

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------------------cccccccCCCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------------------YLPYHMRDDSK   98 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------------------~~~~~~~~~~~   98 (312)
                      .+-|.++.|...      |.+||||..+|.|.++.-.....                            ..+.++.. .+
T Consensus        25 adiis~vef~~~------Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~-~n   97 (433)
T KOG1354|consen   25 ADIISAVEFDHY------GERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDD-GN   97 (433)
T ss_pred             hcceeeEEeecc------cceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCC-CC
Confidence            456889999988      99999999999999986543321                            12233322 23


Q ss_pred             CceEEEEeCCCcEEEEcCCCCccee------------------ee-----------eeeecccCCCccceeEEEECCCCC
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLW------------------LE-----------TARVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~------------------~~-----------~~~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                      ...++..+.|.+|++|-+.......                  +.           ..+......|...|.++.++.|+.
T Consensus        98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~E  177 (433)
T KOG1354|consen   98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKE  177 (433)
T ss_pred             ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccc
Confidence            4478888999999999876432211                  00           000111235777889999999999


Q ss_pred             eEEEeecCCeEEEecccCceeeeec-------------ccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeE---
Q psy15191        150 YIIAHGFQGSLHLDVTTWKQIQTLP-------------CHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRL---  212 (312)
Q Consensus       150 ~l~~~~~~~~i~~d~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~---  212 (312)
                      .++++ .|-.|.+    |.+...-+             ....-|++..|+| ..+.|+..+..|+|++-|++.....   
T Consensus       178 t~lSA-DdLRINL----Wnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~h  252 (433)
T KOG1354|consen  178 TFLSA-DDLRINL----WNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAH  252 (433)
T ss_pred             eEeec-cceeeee----ccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcch
Confidence            88875 4556666    65433211             2234578889999 5678888899999999999942211   


Q ss_pred             -EEEeccCCCC---cc--cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC------
Q psy15191        213 -SLVACSDKTN---GV--HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG------  280 (312)
Q Consensus       213 -~~~~~~~~~~---~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------  280 (312)
                       ..+..+....   +.  --..|..+.|+++|+|+++-.. -+|++||+.....           ++...+-|.      
T Consensus       253 sKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~-----------pv~t~~vh~~lr~kL  320 (433)
T KOG1354|consen  253 SKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAK-----------PVETYPVHEYLRSKL  320 (433)
T ss_pred             hhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCC-----------cceEEeehHhHHHHH
Confidence             1111111111   00  2356889999999999997543 4799999965533           333333332      


Q ss_pred             ------cce---eEEEeccCCCeEEEEecCCC
Q psy15191        281 ------YEI---YSLAASHDGTLLASACKATK  303 (312)
Q Consensus       281 ------~~v---~~~~~s~~~~~l~s~s~d~~  303 (312)
                            ..|   ..++|+-++.+++|||..+-
T Consensus       321 c~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~  352 (433)
T KOG1354|consen  321 CSLYENDAIFDKFECSWSGNDSYVMTGSYNNV  352 (433)
T ss_pred             HHHhhccchhheeEEEEcCCcceEecccccce
Confidence                  122   35789999999999976544

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.51  E-value=2.5e-11  Score=102.40  Aligned_cols=199  Identities=15%  Similarity=0.119  Sum_probs=126.6

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCccc-------ccccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNY-------LPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~-------~~~~~~~~~~~~~  101 (312)
                      ++.++ ...+.+..+...+...+|+|+      |++|+.+..+   ..|++||+.+++..       ......+++++..
T Consensus       175 ~d~~g-~~~~~l~~~~~~~~~p~~Spd------g~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~  247 (417)
T TIGR02800       175 ADYDG-ANPQTITRSREPILSPAWSPD------GQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSK  247 (417)
T ss_pred             EcCCC-CCCEEeecCCCceecccCCCC------CCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCE
Confidence            45543 334556667778889999998      8988877643   47999999877542       1223445777776


Q ss_pred             EE-EEeCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC--eEEE-ecccCceeeeec
Q psy15191        102 LL-SCSMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG--SLHL-DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-d~~~~~~~~~~~  174 (312)
                      |+ +.+.++  .|++|++.++....+        ..+........|+|+++.|+..+. .+  .|.+ ++.+.+.. .+.
T Consensus       248 l~~~~~~~~~~~i~~~d~~~~~~~~l--------~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~  318 (417)
T TIGR02800       248 LAVSLSKDGNPDIYVMDLDGKQLTRL--------TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLT  318 (417)
T ss_pred             EEEEECCCCCccEEEEECCCCCEEEC--------CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Eee
Confidence            65 444444  588888876432211        122223345689999998876654 33  4555 66555433 233


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCC---eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC---
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDR---RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG---  248 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---  248 (312)
                      .+........|+|+|++++.++.++   .|.+||+.+... ..+...        .......|+|++++|+..+.++   
T Consensus       319 ~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~--------~~~~~p~~spdg~~l~~~~~~~~~~  389 (417)
T TIGR02800       319 FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT--------GLDESPSFAPNGRMILYATTRGGRG  389 (417)
T ss_pred             cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC--------CCCCCceECCCCCEEEEEEeCCCcE
Confidence            3455677889999999999888775   789999886433 322211        1123458999999888777654   


Q ss_pred             eEEEEec
Q psy15191        249 VCVVWGL  255 (312)
Q Consensus       249 ~i~iwd~  255 (312)
                      .+++.+.
T Consensus       390 ~l~~~~~  396 (417)
T TIGR02800       390 VLGLVST  396 (417)
T ss_pred             EEEEEEC
Confidence            4555554

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1409|consensus

Probab=99.50  E-value=1.7e-12  Score=99.02  Aligned_cols=241  Identities=14%  Similarity=0.211  Sum_probs=167.6

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEe
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCS  106 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~  106 (312)
                      ..+++.++||.+.|+....-|.      ..-+++.+.|.+++||--.+...          .......+.++...|+.+-
T Consensus        14 p~ll~~~eG~~d~vn~~~l~~~------e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~   87 (404)
T KOG1409|consen   14 PELLSKIEGSQDDVNAAILIPK------EEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQ   87 (404)
T ss_pred             hhhhhhhcCchhhhhhheeccC------CCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEE
Confidence            3457788999999999888887      66799999999999996544332          1233334455666788888


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAF  185 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~  185 (312)
                      ..|++.-+.+...-   ...........|...+..+-|+-...++++.+.|..+.. -.+......... .......+.+
T Consensus        88 ~ngtvtefs~sedf---nkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~-~~~~~t~~~~  163 (404)
T KOG1409|consen   88 DNGTVTEFALSEDF---NKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYN-FETPASALQF  163 (404)
T ss_pred             ecceEEEEEhhhhh---hhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceE-eeccCCCCce
Confidence            89999888765321   112223334578889999999999999999999988877 223222222111 0011111111


Q ss_pred             CCCCCEEEEEecCCeEEEEEccC--CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQS--SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED  263 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  263 (312)
                      .  -.+...|...|.|.+-.+..  ...+..+.+       |...+++++|.|..+.|.+|..|..+.+||+....-   
T Consensus       164 d--~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~-------h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g---  231 (404)
T KOG1409|consen  164 D--ALYAFVGDHSGQITMLKLEQNGCQLITTFNG-------HTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKG---  231 (404)
T ss_pred             e--eEEEEecccccceEEEEEeecCCceEEEEcC-------cccceEEEEEcCCCcEEEeccccCceEEEeccCCcc---
Confidence            1  11445555566666555443  233333333       889999999999999999999999999999976542   


Q ss_pred             cccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        264 LVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                              ...++.+|...|..+..-+.-+.|+++     ++||.|.+|
T Consensus       232 --------~~~el~gh~~kV~~l~~~~~t~~l~S~-----~edg~i~~w  267 (404)
T KOG1409|consen  232 --------TAYELQGHNDKVQALSYAQHTRQLISC-----GEDGGIVVW  267 (404)
T ss_pred             --------eeeeeccchhhhhhhhhhhhheeeeec-----cCCCeEEEE
Confidence                    577888999999999998888999999     555559988

>KOG4547|consensus

Probab=99.50  E-value=7.8e-12  Score=101.91  Aligned_cols=195  Identities=16%  Similarity=0.116  Sum_probs=140.1

Q ss_pred             CceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      ..++|....||.+++|+...++...-+. +       .+..+..++-..|.+....... .....         -..-.-
T Consensus         5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~-p-------~~~~s~t~~~~~w~L~~~~s~~-k~~~~---------~~~~~~   66 (541)
T KOG4547|consen    5 LDYFALSTGDGRLRIWDTAKNQLQQEFA-P-------IASLSGTCTYTKWGLSADYSPM-KWLSL---------EKAKKA   66 (541)
T ss_pred             hheEeecCCCCeEEEEEccCceeeeeec-c-------chhccCcceeEEEEEEeccchH-HHHhH---------HHHhhc
Confidence            6789999999999999998877543322 1       1223333444555432211000 00000         000111


Q ss_pred             CCCCCeEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC
Q psy15191        145 GPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT  221 (312)
Q Consensus       145 ~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  221 (312)
                      +.+...++-|...|.|.+ +....++...+.  .|.+.|.++.++.+-..|.+++.|+.+..|+......+.....    
T Consensus        67 s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~----  142 (541)
T KOG4547|consen   67 SLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKE----  142 (541)
T ss_pred             cCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeecc----
Confidence            234556777888888888 666666666655  7999999999999999999999999999999998888877776    


Q ss_pred             CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC-----CCeEE
Q psy15191        222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD-----GTLLA  296 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l~  296 (312)
                         ....+.+++.+||+..|++++.  .|++||+++..            .+..+.||.++|++++|-.+     |.++.
T Consensus       143 ---~~~~~~sl~is~D~~~l~~as~--~ik~~~~~~ke------------vv~~ftgh~s~v~t~~f~~~~~g~~G~~vL  205 (541)
T KOG4547|consen  143 ---QKPLVSSLCISPDGKILLTASR--QIKVLDIETKE------------VVITFTGHGSPVRTLSFTTLIDGIIGKYVL  205 (541)
T ss_pred             ---CCCccceEEEcCCCCEEEeccc--eEEEEEccCce------------EEEEecCCCcceEEEEEEEeccccccceee
Confidence               4455778999999999998874  79999999873            78899999999999999877     66666


Q ss_pred             EE
Q psy15191        297 SA  298 (312)
Q Consensus       297 s~  298 (312)
                      ++
T Consensus       206 ss  207 (541)
T KOG4547|consen  206 SS  207 (541)
T ss_pred             ec
Confidence            55

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.49  E-value=4.6e-11  Score=100.78  Aligned_cols=196  Identities=14%  Similarity=0.052  Sum_probs=124.2

Q ss_pred             cEEEeeecCCccc-------ccccccCCCCCceEEEEeCC---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         76 TAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        76 ~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      .|.++|.......       ......+++++..++.+..+   ..|++||+.+++...+.        .....+.+++|+
T Consensus       171 ~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~--------~~~~~~~~~~~s  242 (417)
T TIGR02800       171 ELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVA--------SFPGMNGAPAFS  242 (417)
T ss_pred             eEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEee--------cCCCCccceEEC
Confidence            5777776543321       13344567888888877644   47999999875432211        122345668999


Q ss_pred             CCCCeEEEe-ecCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-C--eEEEEEccCCCeEEEEecc
Q psy15191        146 PRGDYIIAH-GFQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-R--RWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       146 ~~~~~l~~~-~~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~~wd~~~~~~~~~~~~~  218 (312)
                      |+++.|+.. ..++  .+.+ ++.+..... +..+........|+|||+.|+..+.. +  .|+++|+.+.+... +.. 
T Consensus       243 pDg~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~~-  319 (417)
T TIGR02800       243 PDGSKLAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR-LTF-  319 (417)
T ss_pred             CCCCEEEEEECCCCCccEEEEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eec-
Confidence            999977653 4444  3665 666554332 33344445577899999988776543 3  57888877655332 221 


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCC---eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDG---VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL  295 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  295 (312)
                            +...+..+.|+|+|++|+.++.++   .|.+||+..+.             ...+... ......+|+|+|++|
T Consensus       320 ------~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~-------------~~~l~~~-~~~~~p~~spdg~~l  379 (417)
T TIGR02800       320 ------RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG-------------ERVLTDT-GLDESPSFAPNGRMI  379 (417)
T ss_pred             ------CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC-------------eEEccCC-CCCCCceECCCCCEE
Confidence                  333456789999999999887765   78888887642             2222222 223456899999999


Q ss_pred             EEEecCC
Q psy15191        296 ASACKAT  302 (312)
Q Consensus       296 ~s~s~d~  302 (312)
                      +..+.++
T Consensus       380 ~~~~~~~  386 (417)
T TIGR02800       380 LYATTRG  386 (417)
T ss_pred             EEEEeCC
Confidence            8887654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0974|consensus

Probab=99.48  E-value=2.4e-12  Score=111.27  Aligned_cols=183  Identities=19%  Similarity=0.296  Sum_probs=135.2

Q ss_pred             CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee-----
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ-----  171 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~-----  171 (312)
                      .+...++....++.+.+||......  .......+ ...-....-+-++++.-++++|+.-+.+.+    |+...     
T Consensus        97 ~e~k~i~l~~~~ns~~i~d~~~~~~--~~~i~~~e-r~~l~~~~~~g~s~~~~~i~~gsv~~~iiv----W~~~~dn~p~  169 (967)
T KOG0974|consen   97 EENKKIALVTSRNSLLIRDSKNSSV--LSKIQSDE-RCTLYSSLIIGDSAEELYIASGSVFGEIIV----WKPHEDNKPI  169 (967)
T ss_pred             hhcceEEEEEcCceEEEEecccCce--ehhcCCCc-eEEEEeEEEEeccCcEEEEEeccccccEEE----EeccccCCcc
Confidence            3445788888889999999875321  11111000 000111222445677778899999999988    55432     


Q ss_pred             eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191        172 TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV  251 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  251 (312)
                      .+.+|.+.|.++.++.||.++++.|.|+++++|++.+.+...      ...+.|...|..++|.|+  +++++++|.+.+
T Consensus       170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~------~~~fgHsaRvw~~~~~~n--~i~t~gedctcr  241 (967)
T KOG0974|consen  170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG------CTGFGHSARVWACCFLPN--RIITVGEDCTCR  241 (967)
T ss_pred             eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC------cccccccceeEEEEeccc--eeEEeccceEEE
Confidence            355899999999999999999999999999999999877654      222339999999999998  899999999999


Q ss_pred             EEecCCCCCCcccccccccceeEEeeccC-cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        252 VWGLGEPPTEEDLVQNTLWPEVQKLYGHG-YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       252 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|+....             .+..+.+|. ..+..++..++...++|++.|+.     +++|
T Consensus       242 vW~~~~~-------------~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~-----lk~~  285 (967)
T KOG0974|consen  242 VWGVNGT-------------QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDST-----LKLW  285 (967)
T ss_pred             EEecccc-------------eehhhhhhhhcceeEEEEcCCceEEEeeccCcc-----hhhh
Confidence            9965543             455667775 46899999999999999955554     9887

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.48  E-value=1.8e-09  Score=88.34  Aligned_cols=240  Identities=17%  Similarity=0.241  Sum_probs=149.3

Q ss_pred             CCceEeCCCCeEEEEecc---CCCceEEEEEeCCCCce--EEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEE
Q psy15191          5 PGDVVNGEGGKVLYTLTN---HKSKVMAVKWNGEGGKV--LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAI   78 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~---h~~~v~~~~w~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~   78 (312)
                      |.-+.-..+++.++....   ..+.|....++.+++++  +.+..........++++|+      +++|+++. .+|.|.
T Consensus        39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~------g~~l~vany~~g~v~  112 (345)
T PF10282_consen   39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPD------GRFLYVANYGGGSVS  112 (345)
T ss_dssp             ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTT------SSEEEEEETTTTEEE
T ss_pred             CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecC------CCEEEEEEccCCeEE
Confidence            444555556778887765   57889988888875544  3444433456667888888      88887775 589999


Q ss_pred             EeeecCCccc----------------------ccccccCCCCCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191         79 LWKYVSEGNY----------------------LPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEVGGN  135 (312)
Q Consensus        79 vw~~~~~~~~----------------------~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  135 (312)
                      ++++......                      ..-....+|++.++++.. ....|.+|+++............ .. ..
T Consensus       113 v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~-~~-~~  190 (345)
T PF10282_consen  113 VFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSI-KV-PP  190 (345)
T ss_dssp             EEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEE-EC-ST
T ss_pred             EEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeecc-cc-cc
Confidence            9999874221                      111233467777766654 34579999988755332221111 11 34


Q ss_pred             ccceeEEEECCCCCeEEEee-cCCeEEE-ecc--cCce--eeeec------ccCCceeEEEECCCCCEEEEEe-cCCeEE
Q psy15191        136 TLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVT--TWKQ--IQTLP------CHQLTITQLAFSPDDTHLVSVS-RDRRWG  202 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~--~~~~--~~~~~------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~  202 (312)
                      ......++|+|+++++++.. .++.|.+ +..  ++.+  .....      ........|+++|||++|+++. ..+.|.
T Consensus       191 G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~  270 (345)
T PF10282_consen  191 GSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSIS  270 (345)
T ss_dssp             TSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEE
T ss_pred             CCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEE
Confidence            45578999999999887665 4666766 444  3322  22222      1122578899999999988876 457899


Q ss_pred             EEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecC
Q psy15191        203 LYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLG  256 (312)
Q Consensus       203 ~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~  256 (312)
                      +|++.. ...+..+.....    .......++++|+|++|+++. .++.|.+|++.
T Consensus       271 vf~~d~~~g~l~~~~~~~~----~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d  322 (345)
T PF10282_consen  271 VFDLDPATGTLTLVQTVPT----GGKFPRHFAFSPDGRYLYVANQDSNTVSVFDID  322 (345)
T ss_dssp             EEEECTTTTTEEEEEEEEE----SSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             EEEEecCCCceEEEEEEeC----CCCCccEEEEeCCCCEEEEEecCCCeEEEEEEe
Confidence            999943 233333222110    233467899999999998776 56789999875

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.48  E-value=1e-10  Score=98.81  Aligned_cols=222  Identities=13%  Similarity=0.034  Sum_probs=137.4

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCccccc-------ccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNYLP-------YHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~~~-------~~~~~~~~~~~  101 (312)
                      ++.+++. .+.+..+...+....|+|+      |+.|+..+.+   ..|.+||+.+++...+       ....++|++..
T Consensus       184 ~d~~g~~-~~~l~~~~~~~~~p~wSpD------G~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~  256 (430)
T PRK00178        184 SDYDGAR-AVTLLQSREPILSPRWSPD------GKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSK  256 (430)
T ss_pred             ECCCCCC-ceEEecCCCceeeeeECCC------CCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCE
Confidence            4555444 4556567788999999999      8888766543   3688999987754221       22456788877


Q ss_pred             EE-EEeCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC--eEEE-ecccCceeeeec
Q psy15191        102 LL-SCSMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG--SLHL-DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-d~~~~~~~~~~~  174 (312)
                      ++ +...++  .|.++|+.+++...+        ..+........|+|+|+.++..+. ++  .+.+ ++.+.+......
T Consensus       257 la~~~~~~g~~~Iy~~d~~~~~~~~l--------t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~  328 (430)
T PRK00178        257 LAFVLSKDGNPEIYVMDLASRQLSRV--------TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF  328 (430)
T ss_pred             EEEEEccCCCceEEEEECCCCCeEEc--------ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence            76 444555  588888887542211        122333456789999998876654 33  3555 666555433221


Q ss_pred             ccCCceeEEEECCCCCEEEEEecC-C--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-C--
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRD-R--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-G--  248 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g--  248 (312)
                       .........|+|||+.++..+.+ +  .|.++|+.+++.. .+...        .......|+|+|+.++..+.+ +  
T Consensus       329 -~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~~--------~~~~~p~~spdg~~i~~~~~~~g~~  398 (430)
T PRK00178        329 -VGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTDT--------SLDESPSVAPNGTMLIYATRQQGRG  398 (430)
T ss_pred             -CCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccCC--------CCCCCceECCCCCEEEEEEecCCce
Confidence             12233457899999999877653 3  4888898876543 23211        011235899999998876644 3  


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      .|.++++...             ....+..+.+.+...+|+|-
T Consensus       399 ~l~~~~~~g~-------------~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        399 VLMLVSINGR-------------VRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             EEEEEECCCC-------------ceEECcCCCCCcCCCccCCC
Confidence            5666676433             23344445566777888873

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.47  E-value=1.4e-10  Score=94.76  Aligned_cols=180  Identities=14%  Similarity=0.114  Sum_probs=118.5

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      .+++-..++.|.+.|..+.+  .+..++     ........+.++|||+++++++.||.+.+ |+.+.+.+...+. ...
T Consensus         8 ~~V~~~~~~~v~viD~~t~~--~~~~i~-----~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~   79 (369)
T PF02239_consen    8 FYVVERGSGSVAVIDGATNK--VVARIP-----TGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGN   79 (369)
T ss_dssp             EEEEEGGGTEEEEEETTT-S--EEEEEE------STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSE
T ss_pred             EEEEecCCCEEEEEECCCCe--EEEEEc-----CCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCC
Confidence            34566778999999988733  333333     11222345789999999999999999999 9999999988873 445


Q ss_pred             eeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCC
Q psy15191        180 ITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGE  257 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~  257 (312)
                      ..++++++||++++++. ..+.+.++|.++.+.+..+.............+.++..+|....++.. -+-+.|.+-|+..
T Consensus        80 ~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d  159 (369)
T PF02239_consen   80 PRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSD  159 (369)
T ss_dssp             EEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTT
T ss_pred             cceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecc
Confidence            78899999999998775 689999999999998888765432221134567788888888855544 4558888888776


Q ss_pred             CCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        258 PPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ...           .......-.....+..|+|++++++.+.
T Consensus       160 ~~~-----------~~~~~i~~g~~~~D~~~dpdgry~~va~  190 (369)
T PF02239_consen  160 PKN-----------LKVTTIKVGRFPHDGGFDPDGRYFLVAA  190 (369)
T ss_dssp             SSC-----------EEEEEEE--TTEEEEEE-TTSSEEEEEE
T ss_pred             ccc-----------cceeeecccccccccccCcccceeeecc
Confidence            532           2222333455677899999999887764

...

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.45  E-value=2.1e-09  Score=83.21  Aligned_cols=265  Identities=12%  Similarity=0.132  Sum_probs=166.5

Q ss_pred             CCceEEEEEeCCCCceE-EEEccccCcEEEEEEecCcCcCCCCceEEEecC---CCcEEEeeecC--Ccc----------
Q psy15191         24 KSKVMAVKWNGEGGKVL-YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL---DKTAILWKYVS--EGN----------   87 (312)
Q Consensus        24 ~~~v~~~~w~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~--~~~----------   87 (312)
                      +..|.....+..+|+.- ..+-.+...++-|+|+|+      ++.|.++-.   +|.|--|.++.  +..          
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~------~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g   88 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPD------QRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPG   88 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCC------CCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCC
Confidence            45666666665555432 223356778899999998      888887754   47788887775  333          


Q ss_pred             cccccccCCCCCceEEEEe-CCCcEEEEcCCCCcce-eeeee-eecccCC----CccceeEEEECCCCCeEEEeec--CC
Q psy15191         88 YLPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGL-WLETA-RVGEVGG----NTLGFYGCKFGPRGDYIIAHGF--QG  158 (312)
Q Consensus        88 ~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~-~~~~~-~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--~~  158 (312)
                      ........++++.+++++. ..|.|.++-++..-.. ..... .......    ....+....+.|++++|++...  |.
T Consensus        89 ~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dr  168 (346)
T COG2706          89 SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDR  168 (346)
T ss_pred             CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCce
Confidence            1224445567777776665 4578999988663111 11111 1000001    1222788899999999988753  43


Q ss_pred             eEEEecccCceeeeec---ccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCC-CeEEEEeccCCC--CcccceeeEE
Q psy15191        159 SLHLDVTTWKQIQTLP---CHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSS-GRLSLVACSDKT--NGVHKRIIWG  231 (312)
Q Consensus       159 ~i~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~-~~~~~~~~~~~~--~~~~~~~v~~  231 (312)
                      ....++..+.+...-+   .....-+.|.|+|++++....+ .+++|.+|..... ..+..+......  .+.......+
T Consensus       169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa  248 (346)
T COG2706         169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA  248 (346)
T ss_pred             EEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence            3333655554433221   3445678999999999887765 5899999998874 333333322211  1224456778


Q ss_pred             EEEcCCCceEEEecc-CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        232 VAWSHDSRYFLTISR-DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       232 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      +..+|||++|.++.. ...|.+|.+.......        ..+.....+....+++.|+++|++|++++.++
T Consensus       249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L--------~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~s  312 (346)
T COG2706         249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKL--------ELVGITPTEGQFPRDFNINPSGRFLIAANQKS  312 (346)
T ss_pred             EEECCCCCEEEEecCCCCeEEEEEEcCCCCEE--------EEEEEeccCCcCCccceeCCCCCEEEEEccCC
Confidence            999999999998753 3378888887653211        13334444566689999999999999997654

>KOG0974|consensus

Probab=99.45  E-value=4.2e-12  Score=109.75  Aligned_cols=180  Identities=17%  Similarity=0.246  Sum_probs=139.7

Q ss_pred             CceEEEecCCCcEEEeeecCCccc------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV  132 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  132 (312)
                      .+.++.+..+..+.+||...+...            .......+.+..++++|+.-+.|.+|+....+.. .      ..
T Consensus        99 ~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p-~------~l  171 (967)
T KOG0974|consen   99 NKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKP-I------RL  171 (967)
T ss_pred             cceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCc-c------ee
Confidence            677888888899999998776541            2222334667778999999999999998732211 1      34


Q ss_pred             CCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee-eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC
Q psy15191        133 GGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ-TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG  210 (312)
Q Consensus       133 ~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  210 (312)
                      .+|.+.+.++.++.+|+++++.+.|..+++ ++.+.+... ..-+|..++..++|+|+  ++++++.|.+.++|+.. ..
T Consensus       172 ~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~  248 (967)
T KOG0974|consen  172 KGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GT  248 (967)
T ss_pred             cccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cc
Confidence            689999999999999999999999999999 333333333 23379999999999998  89999999999999765 33


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      .+..+...      ....+..++..++...+++++.|+.+++|++.....
T Consensus       249 ~l~~y~~h------~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~~  292 (967)
T KOG0974|consen  249 QLEVYDEH------SGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRGL  292 (967)
T ss_pred             eehhhhhh------hhcceeEEEEcCCceEEEeeccCcchhhhhhhcccc
Confidence            34344432      445689999999999999999999999999865543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=1.2e-10  Score=97.48  Aligned_cols=228  Identities=13%  Similarity=0.012  Sum_probs=131.7

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCce--E-EEecCCC--cEEEeeecCCccccc-------ccccCCCCCc
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD--L-VSCSLDK--TAILWKYVSEGNYLP-------YHMRDDSKQL  100 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~--l-~s~~~dg--~i~vw~~~~~~~~~~-------~~~~~~~~~~  100 (312)
                      +.+++. .+.+......+.+-+|+|+      |+.  + ++...+|  .|.+.++.+++...+       ....++|++.
T Consensus       171 d~dG~~-~~~lt~~~~~~~sP~wSPD------G~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~  243 (428)
T PRK01029        171 DYDGQN-LRPLTQEHSLSITPTWMHI------GSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKK  243 (428)
T ss_pred             cCCCCC-ceEcccCCCCcccceEccC------CCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCC
Confidence            444443 3445545566778899998      764  2 2444444  467778777654222       2234578887


Q ss_pred             eEEEEeC-CC--c--EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE---eccc-Ccee
Q psy15191        101 HLLSCSM-DK--S--IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL---DVTT-WKQI  170 (312)
Q Consensus       101 ~l~~~~~-d~--~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~---d~~~-~~~~  170 (312)
                      .|+..+. +|  .  +..|++............    ..........+|+|||+.|+..+ .+|...+   ++.. ....
T Consensus       244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt----~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~  319 (428)
T PRK01029        244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLL----NEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP  319 (428)
T ss_pred             EEEEEECCCCCcceeEEEeecccCCCCcceEee----cCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce
Confidence            7776553 23  2  333665542111001111    11112335679999999887665 4554333   3321 1112


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEecC---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-  246 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-  246 (312)
                      ..+..+...+....|+|||+.|+..+.+   ..|.+||+.+++......        ....+....|+|||+.|+.... 
T Consensus       320 ~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~--------~~~~~~~p~wSpDG~~L~f~~~~  391 (428)
T PRK01029        320 RLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT--------SPENKESPSWAIDSLHLVYSAGN  391 (428)
T ss_pred             EEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC--------CCCCccceEECCCCCEEEEEECC
Confidence            2333344567788999999998876543   469999998776543322        1123456899999998875432 


Q ss_pred             --CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        247 --DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       247 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                        ...|+++|+..+.             ...+....+.+...+|+|-.
T Consensus       392 ~g~~~L~~vdl~~g~-------------~~~Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        392 SNESELYLISLITKK-------------TRKIVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             CCCceEEEEECCCCC-------------EEEeecCCCcccCceecCCC
Confidence              3478888887652             23333344556778888854

>KOG0280|consensus

Probab=99.44  E-value=2e-11  Score=91.42  Aligned_cols=237  Identities=14%  Similarity=0.168  Sum_probs=155.3

Q ss_pred             CcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEE
Q psy15191         48 SKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSII  112 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~  112 (312)
                      ..++.+.|...   ..+|. .++-+..+|.|.++.......              .......++..+..++++..+|.+.
T Consensus        70 s~~~dm~w~~~---~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~  146 (339)
T KOG0280|consen   70 STEFDMLWRIR---ETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSIS  146 (339)
T ss_pred             cccceeeeeec---cCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEE
Confidence            45667777654   11234 566777789999997655432              1122233455566788888888888


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccC-cee-eeecccCCceeEEEECC-
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTW-KQI-QTLPCHQLTITQLAFSP-  187 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~-~~~-~~~~~~~~~v~~~~~~~-  187 (312)
                      +-+....     ........+.|..+++...|+. +.+.+++|+.|+.+.. |++.- +.+ +..+.|...|.+|.-+| 
T Consensus       147 ~v~~t~~-----~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~  221 (339)
T KOG0280|consen  147 GVYETEM-----VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPP  221 (339)
T ss_pred             EEeccee-----eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCC
Confidence            5443321     1122334557888899999986 4568899999999999 55411 111 12336888899998887 


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCC--ceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDS--RYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      .+.+++||+.|..|++||.|+..+ +....        ..+.|+.+.++|.-  +.|+++-.+| .+|-+......+...
T Consensus       222 ~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~--------v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~  292 (339)
T KOG0280|consen  222 KPTYIATGSYDECIRVLDTRNMGKPLFKAK--------VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQI  292 (339)
T ss_pred             CCceEEEeccccceeeeehhcccCccccCc--------cccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchhe
Confidence            688999999999999999996443 32222        55789999999853  4566666666 777777766433111


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEE-eC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAII-IW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~-iW  312 (312)
                             .......|.+-.+.-.|.....+|||++    -.|..|+ +|
T Consensus       293 -------~~~s~~~hdSl~YG~DWd~~~~~lATCs----FYDk~~~~~W  330 (339)
T KOG0280|consen  293 -------VLPSDKIHDSLCYGGDWDSKDSFLATCS----FYDKKIRQLW  330 (339)
T ss_pred             -------eeeccccccceeeccccccccceeeeee----ccccceeeee
Confidence                   3444556888888888866667888876    3344454 55

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.44  E-value=1.5e-10  Score=97.74  Aligned_cols=222  Identities=13%  Similarity=0.039  Sum_probs=133.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC-C--cEEEeeecCCcccc-------cccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-K--TAILWKYVSEGNYL-------PYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-g--~i~vw~~~~~~~~~-------~~~~~~~~~~~~  101 (312)
                      ++.++.. .+.+..+...+.+..|+|+      |+.|+..+.+ +  .|.+||+.+++...       .....++|++..
T Consensus       203 ~d~dG~~-~~~l~~~~~~~~~p~wSPD------G~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~  275 (448)
T PRK04792        203 ADYDGYN-EQMLLRSPEPLMSPAWSPD------GRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKK  275 (448)
T ss_pred             EeCCCCC-ceEeecCCCcccCceECCC------CCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCE
Confidence            3444433 3455556778889999999      8888766533 3  58888887765421       122345778887


Q ss_pred             EEE-EeCCCc--EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCe--EEE-ecccCceeeeec
Q psy15191        102 LLS-CSMDKS--IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGS--LHL-DVTTWKQIQTLP  174 (312)
Q Consensus       102 l~~-~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~--i~~-d~~~~~~~~~~~  174 (312)
                      |+. .+.++.  |.++|+.+++...        +..+.......+|+|+++.++..+. ++.  +.+ |+.+.+......
T Consensus       276 La~~~~~~g~~~Iy~~dl~tg~~~~--------lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~  347 (448)
T PRK04792        276 LALVLSKDGQPEIYVVDIATKALTR--------ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTF  347 (448)
T ss_pred             EEEEEeCCCCeEEEEEECCCCCeEE--------CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEec
Confidence            764 555665  7777877643211        1122334566899999998876654 333  444 666555433211


Q ss_pred             ccCCceeEEEECCCCCEEEEEecC-C--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CC--
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRD-R--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DG--  248 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--  248 (312)
                       ........+|+|||++|+..+.+ +  .|.++|+.++... .+....        ......|+|+|+.|+..+. ++  
T Consensus       348 -~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~--------~d~~ps~spdG~~I~~~~~~~g~~  417 (448)
T PRK04792        348 -EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR--------LDESPSVAPNGTMVIYSTTYQGKQ  417 (448)
T ss_pred             -CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC--------CCCCceECCCCCEEEEEEecCCce
Confidence             22223457899999998876653 3  4556777765432 222110        1113479999998876654 33  


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      .+++++....             ....+..+.+.+...+|+|-
T Consensus       418 ~l~~~~~~G~-------------~~~~l~~~~g~~~~p~Wsp~  447 (448)
T PRK04792        418 VLAAVSIDGR-------------FKARLPAGQGEVKSPAWSPF  447 (448)
T ss_pred             EEEEEECCCC-------------ceEECcCCCCCcCCCccCCC
Confidence            3666776432             34445555666778888873

>KOG2321|consensus

Probab=99.41  E-value=2.5e-10  Score=93.19  Aligned_cols=259  Identities=12%  Similarity=0.122  Sum_probs=162.0

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEcccc-C-cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHK-S-KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV   83 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~-~-~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~   83 (312)
                      ..|--..+|+++....-.+-.|.+..+..-    .-.|.-|. . .|.-.-.+-+      -..++---.|.+|.+...-
T Consensus        55 t~ik~s~DGqY~lAtG~YKP~ikvydlanL----SLKFERhlDae~V~feiLsDD------~SK~v~L~~DR~IefHak~  124 (703)
T KOG2321|consen   55 TRIKVSPDGQYLLATGTYKPQIKVYDLANL----SLKFERHLDAEVVDFEILSDD------YSKSVFLQNDRTIEFHAKY  124 (703)
T ss_pred             ceeEecCCCcEEEEecccCCceEEEEcccc----eeeeeecccccceeEEEeccc------hhhheEeecCceeeehhhc
Confidence            455666778888776666666655543322    22233332 2 2333222222      2333334457777665422


Q ss_pred             CCccccc------ccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC
Q psy15191         84 SEGNYLP------YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ  157 (312)
Q Consensus        84 ~~~~~~~------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~  157 (312)
                      . ....+      .-+..+....-|+.++....|+-++++.  +..+..+.     .....++++..++...+|++|+.+
T Consensus       125 G-~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEq--GrfL~P~~-----~~~~~lN~v~in~~hgLla~Gt~~  196 (703)
T KOG2321|consen  125 G-RHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQ--GRFLNPFE-----TDSGELNVVSINEEHGLLACGTED  196 (703)
T ss_pred             C-eeeeeecCcCCccccccCCCccEEEeecCcceEEEEccc--cccccccc-----cccccceeeeecCccceEEecccC
Confidence            1 11100      0111122223456666666777778776  43333333     344778999999999999999999


Q ss_pred             CeEEE-ecccCceeeeec------ccCC-----ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        158 GSLHL-DVTTWKQIQTLP------CHQL-----TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       158 ~~i~~-d~~~~~~~~~~~------~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                      |.+.. |.++-.....+.      .|.+     .|+++.|+.+|-.+++|+.+|.+.|||++..+++..-...      .
T Consensus       197 g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~------~  270 (703)
T KOG2321|consen  197 GVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHG------Y  270 (703)
T ss_pred             ceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccC------C
Confidence            99999 444443333333      2333     3999999999999999999999999999998877654422      4


Q ss_pred             ceeeEEEEEcCCC--ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        226 KRIIWGVAWSHDS--RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       226 ~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      .-+|..+.|.+.+  ..+++. ....++|||-.++.            ....+ .....++.+++-|++-++++|-.+.
T Consensus       271 e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk------------~~asi-Ept~~lND~C~~p~sGm~f~Ane~~  335 (703)
T KOG2321|consen  271 ELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGK------------PMASI-EPTSDLNDFCFVPGSGMFFTANESS  335 (703)
T ss_pred             ccceeeecccccCCCceEEec-chHHhhhcccccCC------------ceeec-cccCCcCceeeecCCceEEEecCCC
Confidence            5578889997753  345443 44579999988874            23333 3455699999999999999994443

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.40  E-value=2.8e-10  Score=95.34  Aligned_cols=198  Identities=19%  Similarity=0.057  Sum_probs=113.2

Q ss_pred             cEEEeeecCCccc-------ccccccCCCCCce--E-EEEeCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         76 TAILWKYVSEGNY-------LPYHMRDDSKQLH--L-LSCSMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        76 ~i~vw~~~~~~~~-------~~~~~~~~~~~~~--l-~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      .|.+.|.+.....       ......++|++..  + ++...++  .|.+.++..++...+...        .......+
T Consensus       166 ~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~--------~g~~~~p~  237 (428)
T PRK01029        166 ELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILAL--------QGNQLMPT  237 (428)
T ss_pred             eEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecC--------CCCccceE
Confidence            4556665544331       1223345777654  2 2444443  577778877554333221        22234579


Q ss_pred             ECCCCCeEEEeec-CC--eEEE---ecccC---ceeeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEE--ccC-CC
Q psy15191        144 FGPRGDYIIAHGF-QG--SLHL---DVTTW---KQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYK--RQS-SG  210 (312)
Q Consensus       144 ~~~~~~~l~~~~~-~~--~i~~---d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd--~~~-~~  210 (312)
                      |+|||+.|+..+. +|  .+.+   ++...   ................+|+|||+.|+..+ .+|...+|.  +.. ..
T Consensus       238 wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~  317 (428)
T PRK01029        238 FSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ  317 (428)
T ss_pred             ECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccccc
Confidence            9999998887553 23  2222   33321   22222222223446789999999887665 456555554  432 12


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEE
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA  287 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  287 (312)
                      ....+..       ....+....|+|||+.|+..+.+   ..|++||+..+.             ...+......+....
T Consensus       318 ~~~~lt~-------~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~-------------~~~Lt~~~~~~~~p~  377 (428)
T PRK01029        318 SPRLLTK-------KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR-------------DYQLTTSPENKESPS  377 (428)
T ss_pred             ceEEecc-------CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC-------------eEEccCCCCCccceE
Confidence            2222322       22345678999999988876543   379999998763             333333334567899


Q ss_pred             eccCCCeEEEEecC
Q psy15191        288 ASHDGTLLASACKA  301 (312)
Q Consensus       288 ~s~~~~~l~s~s~d  301 (312)
                      |+|||++|+..+.+
T Consensus       378 wSpDG~~L~f~~~~  391 (428)
T PRK01029        378 WAIDSLHLVYSAGN  391 (428)
T ss_pred             ECCCCCEEEEEECC
Confidence            99999988866543

>KOG4547|consensus

Probab=99.39  E-value=1.9e-10  Score=94.01  Aligned_cols=148  Identities=12%  Similarity=0.083  Sum_probs=119.9

Q ss_pred             CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC  175 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~  175 (312)
                      .+...++-|...|.|.+|++..++......     ...|.+.|.++.++.+-..|.+++.|+.+.. +..+.........
T Consensus        68 ~~t~~lvlgt~~g~v~~ys~~~g~it~~~s-----t~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~  142 (541)
T KOG4547|consen   68 LDTSMLVLGTPQGSVLLYSVAGGEITAKLS-----TDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKE  142 (541)
T ss_pred             CCceEEEeecCCccEEEEEecCCeEEEEEe-----cCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeecc
Confidence            344478888899999999998755333222     2478899999999999999999999999888 7777777777778


Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-----CceEEEe-ccCCe
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-----SRYFLTI-SRDGV  249 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~s~-~~dg~  249 (312)
                      .+..+.+++.+||+..+++++  ++|++||+.+.+.+..+++       |.++|.++.|.-+     |.++.++ ..+..
T Consensus       143 ~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftg-------h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~  213 (541)
T KOG4547|consen  143 QKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTG-------HGSPVRTLSFTTLIDGIIGKYVLSSAAAERG  213 (541)
T ss_pred             CCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecC-------CCcceEEEEEEEeccccccceeeeccccccc
Confidence            888899999999999998875  7899999999999999998       9999999999876     6666654 34556


Q ss_pred             EEEEecCCC
Q psy15191        250 CVVWGLGEP  258 (312)
Q Consensus       250 i~iwd~~~~  258 (312)
                      +.+|-+...
T Consensus       214 i~~w~v~~~  222 (541)
T KOG4547|consen  214 ITVWVVEKE  222 (541)
T ss_pred             eeEEEEEcc
Confidence            788876654

>KOG2041|consensus

Probab=99.39  E-value=3.2e-11  Score=100.91  Aligned_cols=227  Identities=15%  Similarity=0.124  Sum_probs=144.3

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------------cccccccCCCCCceEE
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------------~~~~~~~~~~~~~~l~  103 (312)
                      .....|++|+..      ..++|.|+.||.++|-.+.+...                       ..+....+....+.|-
T Consensus        14 nvkL~c~~WNke------~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLT   87 (1189)
T KOG2041|consen   14 NVKLHCAEWNKE------SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLT   87 (1189)
T ss_pred             CceEEEEEEccc------CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccccc
Confidence            356789999888      78999999999999998766432                       1233344455666788


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +...+|.|.+|-+-.+  .+.....   -....+-|.+++|+.+|..+.....||.|.+ .+. ++.+-...-.......
T Consensus        88 tSDt~GlIiVWmlykg--sW~EEMi---NnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GNRIwgKeLkg~~l~h  161 (1189)
T KOG2041|consen   88 TSDTSGLIIVWMLYKG--SWCEEMI---NNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GNRIWGKELKGQLLAH  161 (1189)
T ss_pred             ccCCCceEEEEeeecc--cHHHHHh---hCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cceecchhcchheccc
Confidence            8889999999987653  2222111   0134567899999999999999999999988 222 1111111111122345


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCC-------e-------------------------------------------E
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSG-------R-------------------------------------------L  212 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~-------~-------------------------------------------~  212 (312)
                      +.|++|.+.++.+-.+|.+.+||....-       .                                           .
T Consensus       162 v~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~  241 (1189)
T KOG2041|consen  162 VLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRM  241 (1189)
T ss_pred             eeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCcee
Confidence            6777777766666667777777655410       0                                           0


Q ss_pred             EEEeccCCC---CcccceeeEEEEEcCCCceEEEeccCC---------eEEEEecCCCCCCcccccccccceeEEeeccC
Q psy15191        213 SLVACSDKT---NGVHKRIIWGVAWSHDSRYFLTISRDG---------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG  280 (312)
Q Consensus       213 ~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (312)
                      +..+.....   .....-.+....|+|+|..||.++.+.         .|.+|..-.             +.+..++...
T Consensus       242 QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G-------------~i~gtlkvpg  308 (1189)
T KOG2041|consen  242 QIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYG-------------HIVGTLKVPG  308 (1189)
T ss_pred             hhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEeccch-------------hheEEEecCC
Confidence            000000000   000234567788999999999887653         444443211             2677777888


Q ss_pred             cceeEEEeccCCCeEEEE
Q psy15191        281 YEIYSLAASHDGTLLASA  298 (312)
Q Consensus       281 ~~v~~~~~s~~~~~l~s~  298 (312)
                      ..|++++|-..|-.+|.+
T Consensus       309 ~~It~lsWEg~gLriA~A  326 (1189)
T KOG2041|consen  309 SCITGLSWEGTGLRIAIA  326 (1189)
T ss_pred             ceeeeeEEcCCceEEEEE
Confidence            899999998877666655

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=3.6e-10  Score=95.47  Aligned_cols=195  Identities=15%  Similarity=0.098  Sum_probs=115.8

Q ss_pred             cEEEeeecCCccc-------ccccccCCCCCceEEEEeCC-C--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         76 TAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD-K--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        76 ~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      .|.++|.+.....       .+....++|++..++..+.+ +  .|.++|+.+++...+..     ..   ......+|+
T Consensus       199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~-----~~---g~~~~~~wS  270 (448)
T PRK04792        199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTS-----FP---GINGAPRFS  270 (448)
T ss_pred             EEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecC-----CC---CCcCCeeEC
Confidence            4666666544321       23345567888888766543 2  58888988754322211     11   223467999


Q ss_pred             CCCCeEEE-eecCCe--EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CC--eEEEEEccCCCeEEEEecc
Q psy15191        146 PRGDYIIA-HGFQGS--LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DR--RWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       146 ~~~~~l~~-~~~~~~--i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~  218 (312)
                      |+|+.|+. ...++.  |.+ |+.+.+... +..+.......+|+|||+.|+..+. ++  .|+++|+.+++.... .. 
T Consensus       271 PDG~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L-t~-  347 (448)
T PRK04792        271 PDGKKLALVLSKDGQPEIYVVDIATKALTR-ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL-TF-  347 (448)
T ss_pred             CCCCEEEEEEeCCCCeEEEEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE-ec-
Confidence            99998775 455664  555 776655433 3334455677899999998876653 33  466677766554332 21 


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEecc-CC--eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISR-DG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL  295 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  295 (312)
                            ........+|+|||++|+..+. ++  .|.++|+.++.             ...+... .......|+|+|++|
T Consensus       348 ------~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~-------------~~~lt~~-~~d~~ps~spdG~~I  407 (448)
T PRK04792        348 ------EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGA-------------MQVLTST-RLDESPSVAPNGTMV  407 (448)
T ss_pred             ------CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCC-------------eEEccCC-CCCCCceECCCCCEE
Confidence                  1111234689999998877654 34  45556766552             2222211 112345899999998


Q ss_pred             EEEecC
Q psy15191        296 ASACKA  301 (312)
Q Consensus       296 ~s~s~d  301 (312)
                      +..+.+
T Consensus       408 ~~~~~~  413 (448)
T PRK04792        408 IYSTTY  413 (448)
T ss_pred             EEEEec
Confidence            887654

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=2.7e-10  Score=96.34  Aligned_cols=195  Identities=14%  Similarity=0.043  Sum_probs=119.0

Q ss_pred             cEEEeeecCCccc-------ccccccCCCCCceEEEEeCC---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         76 TAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        76 ~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      .|.++|.+.....       .+....++|++..|+..+.+   ..|.+|++.+++...+.        ..........|+
T Consensus       180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~--------~~~g~~~~~~~S  251 (430)
T PRK00178        180 TLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT--------NFEGLNGAPAWS  251 (430)
T ss_pred             EEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc--------CCCCCcCCeEEC
Confidence            3666666544321       22344567888888776543   36888999875433221        112234468999


Q ss_pred             CCCCeEEE-eecCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CC--eEEEEEccCCCeEEEEecc
Q psy15191        146 PRGDYIIA-HGFQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DR--RWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       146 ~~~~~l~~-~~~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~  218 (312)
                      |+|+.|+. ...+|  .|.+ |+.+..... +..+........|+|||+.|+..+. ++  .|+++|+.+++....... 
T Consensus       252 pDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~-  329 (430)
T PRK00178        252 PDGSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV-  329 (430)
T ss_pred             CCCCEEEEEEccCCCceEEEEECCCCCeEE-cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC-
Confidence            99998874 44454  4665 777655433 3345555667899999998876654 33  577778776654332211 


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccC-C--eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRD-G--VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL  295 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  295 (312)
                             ........|+|+|++|+..+.+ +  .|.++|+.++.             ...+.. ........|+|||++|
T Consensus       330 -------~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~-------------~~~lt~-~~~~~~p~~spdg~~i  388 (430)
T PRK00178        330 -------GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS-------------VRILTD-TSLDESPSVAPNGTML  388 (430)
T ss_pred             -------CCCccceEECCCCCEEEEEEccCCceEEEEEECCCCC-------------EEEccC-CCCCCCceECCCCCEE
Confidence                   1122356899999999876643 3  58888887652             222221 1122356899999999


Q ss_pred             EEEecC
Q psy15191        296 ASACKA  301 (312)
Q Consensus       296 ~s~s~d  301 (312)
                      +..+.+
T Consensus       389 ~~~~~~  394 (430)
T PRK00178        389 IYATRQ  394 (430)
T ss_pred             EEEEec
Confidence            888654

>KOG2315|consensus

Probab=99.35  E-value=1.4e-09  Score=88.55  Aligned_cols=113  Identities=14%  Similarity=0.176  Sum_probs=83.8

Q ss_pred             cCCceeEEEECCCCCEEEEE--ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc---CCeE
Q psy15191        176 HQLTITQLAFSPDDTHLVSV--SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGVC  250 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i  250 (312)
                      ..++|.++.|+|+++.++++  -.--.+.|||++. ..+..+         ..++-+++-|+|.|++|+.++-   .|.+
T Consensus       269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df---------~egpRN~~~fnp~g~ii~lAGFGNL~G~m  338 (566)
T KOG2315|consen  269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDF---------PEGPRNTAFFNPHGNIILLAGFGNLPGDM  338 (566)
T ss_pred             CCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeC---------CCCCccceEECCCCCEEEEeecCCCCCce
Confidence            57899999999999877664  4567899999984 333322         3344567899999999998875   4689


Q ss_pred             EEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC-CCcccceEEeC
Q psy15191        251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA-TKPEHAAIIIW  312 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d-~~~~dg~i~iW  312 (312)
                      -|||+.+..            ++..+..-.  -+-++|+|||++++|+... +...|..++||
T Consensus       339 EvwDv~n~K------------~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiw  387 (566)
T KOG2315|consen  339 EVWDVPNRK------------LIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIW  387 (566)
T ss_pred             EEEeccchh------------hccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEE
Confidence            999998753            455555433  3457999999999999765 22456668887

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.33  E-value=8.2e-08  Score=74.64  Aligned_cols=241  Identities=14%  Similarity=0.167  Sum_probs=154.1

Q ss_pred             CCCceEeCCCCeEEEEeccC--CCceEEEEEeCCCCceEE--EEccccCcEEEEEEecCcCcCCCCceEEEecC-CCcEE
Q psy15191          4 EPGDVVNGEGGKVLYTLTNH--KSKVMAVKWNGEGGKVLY--TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL-DKTAI   78 (312)
Q Consensus         4 ~~~~v~~~~~~~~~~~~~~h--~~~v~~~~w~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg~i~   78 (312)
                      .|..+.-.+..+.+++....  .+.|.+..|++++|++..  .......+-..++++++      +++++++.. -|.|.
T Consensus        41 nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~------g~~vf~AnY~~g~v~  114 (346)
T COG2706          41 NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDED------GRFVFVANYHSGSVS  114 (346)
T ss_pred             CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCC------CCEEEEEEccCceEE
Confidence            35555555667788877665  788888889988776532  22222344478888887      889888864 47899


Q ss_pred             EeeecCCc-cc--------------------ccccccCCCCCceEEEEeC-CCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         79 LWKYVSEG-NY--------------------LPYHMRDDSKQLHLLSCSM-DKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        79 vw~~~~~~-~~--------------------~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      ++-++... ..                    ..-+....|++.++++..- --.|.+|++..+..........    ...
T Consensus       115 v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v----~~G  190 (346)
T COG2706         115 VYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV----KPG  190 (346)
T ss_pred             EEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccccccc----CCC
Confidence            99886532 21                    1223334677777777653 3468999998644322222221    334


Q ss_pred             cceeEEEECCCCCeEEEee-cCCeEEE---ecccCceee--eec------ccCCceeEEEECCCCCEEEEEec-CCeEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHG-FQGSLHL---DVTTWKQIQ--TLP------CHQLTITQLAFSPDDTHLVSVSR-DRRWGL  203 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~-~~~~i~~---d~~~~~~~~--~~~------~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~  203 (312)
                      .....|.|+|++++..+.. -++.|.+   +....++..  .+.      ........|.++|||++|.++.. ...|.+
T Consensus       191 ~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~  270 (346)
T COG2706         191 AGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAV  270 (346)
T ss_pred             CCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEE
Confidence            5568899999999976654 5777777   222122221  111      23456778999999999998754 347888


Q ss_pred             EEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-eEEEEecCCC
Q psy15191        204 YKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-VCVVWGLGEP  258 (312)
Q Consensus       204 wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~  258 (312)
                      |.+..... +........    +........++|.+++|+++.+++ .|.+|.+...
T Consensus       271 f~V~~~~g~L~~~~~~~t----eg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         271 FSVDPDGGKLELVGITPT----EGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             EEEcCCCCEEEEEEEecc----CCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            88876533 333322111    333466889999999999998755 6888877654

>KOG2315|consensus

Probab=99.33  E-value=6e-10  Score=90.68  Aligned_cols=229  Identities=14%  Similarity=0.135  Sum_probs=139.7

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCC-------ceEEE----------EccccCcEEEEEEecCcCcCCCCceEE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGG-------KVLYT----------LTNHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~-------~~~~~----------~~~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      .+|+.+++.....+......-++..|+.+..       ..+..          -+-|...|+.+.++|.    |....+|
T Consensus       108 ~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpg----p~~~~vA  183 (566)
T KOG2315|consen  108 LVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPG----PEPPFVA  183 (566)
T ss_pred             eeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCC----CCCceEE
Confidence            3667676655555554333324555655441       11111          1125677888999887    5445554


Q ss_pred             -----EecCCCcEEEeeecCCccc-----------ccccccCCCCCc-e--EEEEeCC---------CcEEEEcCCCCcc
Q psy15191         70 -----SCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQL-H--LLSCSMD---------KSIIVWAPDPTTG  121 (312)
Q Consensus        70 -----s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~-~--l~~~~~d---------~~i~i~d~~~~~~  121 (312)
                           ..|.-+.|+||........           .-..+.+.+.+. +  |++..-|         .+++++++...+ 
T Consensus       184 vyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s-  262 (566)
T KOG2315|consen  184 VYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGES-  262 (566)
T ss_pred             EEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCce-
Confidence                 3456678999987633221           111111222221 2  2222223         356666666311 


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCeEEEee--cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG--FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                       +...      ....++|+++.|+|+++.++++.  --..+.+ |++ .+++..+.  .++=+++-|+|.|++++.++-+
T Consensus       263 -~~V~------L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFG  332 (566)
T KOG2315|consen  263 -VSVP------LLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFG  332 (566)
T ss_pred             -EEEe------cCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecC
Confidence             1111      13468999999999998877644  3445666 443 44444443  5667889999999999887754


Q ss_pred             ---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc------CCeEEEEecCCCC
Q psy15191        199 ---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR------DGVCVVWGLGEPP  259 (312)
Q Consensus       199 ---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~  259 (312)
                         |.|-+||+.+.+.+..+...         .-+-+.|+|||++++++..      |+.++||++....
T Consensus       333 NL~G~mEvwDv~n~K~i~~~~a~---------~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~  393 (566)
T KOG2315|consen  333 NLPGDMEVWDVPNRKLIAKFKAA---------NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL  393 (566)
T ss_pred             CCCCceEEEeccchhhccccccC---------CceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence               88999999987776655542         1345789999999998865      7889999987653

>KOG0280|consensus

Probab=99.32  E-value=5.9e-10  Score=83.71  Aligned_cols=170  Identities=14%  Similarity=0.107  Sum_probs=114.9

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC---ccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee--eec
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN---TLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ--TLP  174 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~--~~~  174 (312)
                      .++-+...|.|.++..........    ...+...   .....++.|++.+..++++..+|.+.+ +.....+.+  ..+
T Consensus        87 ~l~~a~a~G~i~~~r~~~~~ss~~----L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk  162 (339)
T KOG0280|consen   87 NLLDAHARGQIQLYRNDEDESSVH----LRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWK  162 (339)
T ss_pred             eeeeccccceEEEEeeccceeeee----ecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeeccccc
Confidence            566677788888887654322111    1111111   112457888999999999999999885 444444444  666


Q ss_pred             ccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEE
Q psy15191        175 CHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVV  252 (312)
Q Consensus       175 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i  252 (312)
                      .|.-++....|+. +.+.+++|+.|+.+..||+|..+.. .+.....    |...|.++.-+| .+.++++|+.|-.|++
T Consensus       163 ~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~-i~~n~kv----H~~GV~SI~ss~~~~~~I~TGsYDe~i~~  237 (339)
T KOG0280|consen  163 VHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF-IWHNSKV----HTSGVVSIYSSPPKPTYIATGSYDECIRV  237 (339)
T ss_pred             ccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce-eeeccee----eecceEEEecCCCCCceEEEeccccceee
Confidence            8999999999986 5578999999999999999954422 2221111    778888888875 5779999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ||.+.-..           ++..-. -.+.|..+.++|.
T Consensus       238 ~DtRnm~k-----------Pl~~~~-v~GGVWRi~~~p~  264 (339)
T KOG0280|consen  238 LDTRNMGK-----------PLFKAK-VGGGVWRIKHHPE  264 (339)
T ss_pred             eehhcccC-----------ccccCc-cccceEEEEecch
Confidence            99986533           222211 1356777777663

>KOG4532|consensus

Probab=99.31  E-value=1.1e-09  Score=81.42  Aligned_cols=233  Identities=10%  Similarity=-0.024  Sum_probs=147.5

Q ss_pred             EEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccc-c--------C-CCCCceEEEEeCCCcEEEEcCCCCcc
Q psy15191         52 AVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHM-R--------D-DSKQLHLLSCSMDKSIIVWAPDPTTG  121 (312)
Q Consensus        52 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~--------~-~~~~~~l~~~~~d~~i~i~d~~~~~~  121 (312)
                      .+.|-|. +|-..-.+||.|+.-|...+|...+.+...-.+. .        . ......+..++.|.++++.+++-...
T Consensus        72 g~~F~p~-s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~  150 (344)
T KOG4532|consen   72 GMTFTPG-SFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN  150 (344)
T ss_pred             cccccch-HhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc
Confidence            4455553 2222235799999999999999886654211110 0        0 01112477788899999888775332


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE---ecccCceee-eecccCCceeEEEECCCCCEEEEEec
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQ-TLPCHQLTITQLAFSPDDTHLVSVSR  197 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~  197 (312)
                      ......       ..-.+.+++++++++++++.+....|.+   |-+....+. ......+.-.+..|+.....+|++..
T Consensus       151 ~~~~h~-------~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Q  223 (344)
T KOG4532|consen  151 KFAVHN-------QNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQ  223 (344)
T ss_pred             cceeec-------cccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEec
Confidence            111111       1123788999999999999998888776   444444444 23344555678899999999999999


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc--eEEEeccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR--YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      ||++.|||++...............  |.+.+..+.|+|.|.  +|...-.-+.+.+-|+++....+....     .-..
T Consensus       224 dg~~~I~DVR~~~tpm~~~sstrp~--hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i-----~~d~  296 (344)
T KOG4532|consen  224 DGTCAIYDVRNMATPMAEISSTRPH--HNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVI-----PDDV  296 (344)
T ss_pred             CCcEEEEEecccccchhhhcccCCC--CCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEec-----Cccc
Confidence            9999999999876554433322222  889999999998774  455555567899999988754322110     0011


Q ss_pred             eeccC-cceeEEEeccCCCeEEEEe
Q psy15191        276 LYGHG-YEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       276 ~~~~~-~~v~~~~~s~~~~~l~s~s  299 (312)
                      ...|. ..|..-.|+.++..+.+.+
T Consensus       297 ~~~~~tq~ifgt~f~~~n~s~~v~~  321 (344)
T KOG4532|consen  297 ERKHNTQHIFGTNFNNENESNDVKN  321 (344)
T ss_pred             cccccccccccccccCCCccccccc
Confidence            12233 3377777877776555554

>KOG2314|consensus

Probab=99.31  E-value=8.2e-10  Score=89.91  Aligned_cols=237  Identities=16%  Similarity=0.212  Sum_probs=136.1

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC-----------CCcEEEeeecCCccccccc--------
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL-----------DKTAILWKYVSEGNYLPYH--------   92 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-----------dg~i~vw~~~~~~~~~~~~--------   92 (312)
                      |--.+...+++|. |. .|.-+.|||.      .+||+|=+.           ...++|||+.+|.....+.        
T Consensus       236 WGG~~f~r~~RF~-Hp-~Vq~idfSP~------EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~  307 (698)
T KOG2314|consen  236 WGGESFDRIQRFY-HP-GVQFIDFSPN------EKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLK  307 (698)
T ss_pred             ecCccHHHHHhcc-CC-CceeeecCCc------cceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccc
Confidence            5544444555553 53 4788888888      899998652           2579999999998733222        


Q ss_pred             ---ccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-----CeEEE-e
Q psy15191         93 ---MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-----GSLHL-D  163 (312)
Q Consensus        93 ---~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~-d  163 (312)
                         ..++.++.+++--.. ..|.||+...-  ..+....     -.-..|....|+|.++.||.-...     ..+.+ .
T Consensus       308 WP~frWS~DdKy~Arm~~-~sisIyEtpsf--~lld~Ks-----lki~gIr~FswsP~~~llAYwtpe~~~~parvtL~e  379 (698)
T KOG2314|consen  308 WPIFRWSHDDKYFARMTG-NSISIYETPSF--MLLDKKS-----LKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLME  379 (698)
T ss_pred             cceEEeccCCceeEEecc-ceEEEEecCce--eeecccc-----cCCccccCcccCCCcceEEEEcccccCCcceEEEEe
Confidence               234566666665555 56888876541  1111111     112335556666666655432110     00111 0


Q ss_pred             cccCc----------------------------------------------------eeeeecccCCceeEEEECCCCCE
Q psy15191        164 VTTWK----------------------------------------------------QIQTLPCHQLTITQLAFSPDDTH  191 (312)
Q Consensus       164 ~~~~~----------------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~  191 (312)
                      +.+.+                                                    +....-.....|...+|-|.|+.
T Consensus       380 vPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdk  459 (698)
T KOG2314|consen  380 VPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDK  459 (698)
T ss_pred             cCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCe
Confidence            00000                                                    00000023455677889999998


Q ss_pred             EEEEecC---CeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe---ccCCeEEEEecCCCCCCccc
Q psy15191        192 LVSVSRD---RRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI---SRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       192 l~~~~~d---~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~  264 (312)
                      +++-+.+   .++.+|.+.+ ......+...      .....+.+.|+|.|++++.+   |..|.+.++|+.....    
T Consensus       460 F~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~------dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~----  529 (698)
T KOG2314|consen  460 FAVISGNTVKNTVSFYAVETNIKKPSLVKEL------DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADL----  529 (698)
T ss_pred             EEEEEccccccceeEEEeecCCCchhhhhhh------cccccceEEEcCCCcEEEEEEecccccceEEEecchhhh----
Confidence            8776543   5688888773 3333222222      23446789999999998866   4578999999875311    


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                             .......|. ..+.+.|.|.|+|++|++.-.
T Consensus       530 -------k~~~~~eh~-~at~veWDPtGRYvvT~ss~w  559 (698)
T KOG2314|consen  530 -------KDTASPEHF-AATEVEWDPTGRYVVTSSSSW  559 (698)
T ss_pred             -------hhccCcccc-ccccceECCCCCEEEEeeehh
Confidence                   011112233 357889999999999997543

>KOG1354|consensus

Probab=99.30  E-value=1.2e-10  Score=89.31  Aligned_cols=206  Identities=17%  Similarity=0.265  Sum_probs=131.2

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------------------------------
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------------------------------   87 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------------------------------   87 (312)
                      ..|+.++|.++    .+...++....|.+|++|.+.....                                        
T Consensus        85 EKinkIrw~~~----~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~a  160 (433)
T KOG1354|consen   85 EKINKIRWLDD----GNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYA  160 (433)
T ss_pred             hhhhhceecCC----CCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeecc
Confidence            45889999988    6666788888999999998765332                                        


Q ss_pred             ----cccccccCCCCCceEEEEeCCCcEEEEcCCCCcc-eeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEE
Q psy15191         88 ----YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG-LWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLH  161 (312)
Q Consensus        88 ----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~  161 (312)
                          +.+.......+...+++ +.|=.|.+|+++-..+ -.+...+...+..-..-|++..|+|. .+.++..+..|.|+
T Consensus       161 NaHtyhiNSIS~NsD~Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIr  239 (433)
T KOG1354|consen  161 NAHTYHINSISVNSDKETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIR  239 (433)
T ss_pred             ccceeEeeeeeecCccceEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEE
Confidence                01122222344444444 4566789998874322 11122222222223345788899994 56778888999999


Q ss_pred             E-ecccCceeee----------------ecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc-CCCeEEEEeccCCCCc
Q psy15191        162 L-DVTTWKQIQT----------------LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ-SSGRLSLVACSDKTNG  223 (312)
Q Consensus       162 ~-d~~~~~~~~~----------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~  223 (312)
                      + |++.-.+-..                +..--..|..+.|+++|+++++-. --+|++||+. ..+++..++.......
T Consensus       240 LcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~  318 (433)
T KOG1354|consen  240 LCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRS  318 (433)
T ss_pred             EeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHH
Confidence            9 7774322111                112234678999999999998753 3689999994 4455555544322100


Q ss_pred             c-----ccee---eEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        224 V-----HKRI---IWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       224 ~-----~~~~---v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .     ....   -..++|+-++.++++|+..+.+++|++..+.
T Consensus       319 kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  319 KLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             HHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence            0     1112   2357899999999999999999999976554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.29  E-value=7.5e-08  Score=77.39  Aligned_cols=253  Identities=13%  Similarity=0.065  Sum_probs=136.8

Q ss_pred             CeEEEEeccC----CCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC----------CCcEEE
Q psy15191         14 GKVLYTLTNH----KSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL----------DKTAIL   79 (312)
Q Consensus        14 ~~~~~~~~~h----~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----------dg~i~v   79 (312)
                      ++.++....+    .+.|+-  .|.++++.+.++..-..+- .+ ++|+      ++.|+.+..          +..|.+
T Consensus        12 ~~~v~V~d~~~~~~~~~v~V--iD~~~~~v~g~i~~G~~P~-~~-~spD------g~~lyva~~~~~R~~~G~~~d~V~v   81 (352)
T TIGR02658        12 ARRVYVLDPGHFAATTQVYT--IDGEAGRVLGMTDGGFLPN-PV-VASD------GSFFAHASTVYSRIARGKRTDYVEV   81 (352)
T ss_pred             CCEEEEECCcccccCceEEE--EECCCCEEEEEEEccCCCc-ee-ECCC------CCEEEEEeccccccccCCCCCEEEE
Confidence            4445555543    244433  5788888888887543333 34 7787      777766654          789999


Q ss_pred             eeecCCcccccc---------------cccCCCCCceEEEEe-C-CCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191         80 WKYVSEGNYLPY---------------HMRDDSKQLHLLSCS-M-DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC  142 (312)
Q Consensus        80 w~~~~~~~~~~~---------------~~~~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~  142 (312)
                      ||..+.+...-.               ....++++.+++... . +..|.+.|+.+.+  .+......   + .  ..-.
T Consensus        82 ~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~k--vv~ei~vp---~-~--~~vy  153 (352)
T TIGR02658        82 IDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKA--FVRMMDVP---D-C--YHIF  153 (352)
T ss_pred             EECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCc--EEEEEeCC---C-C--cEEE
Confidence            999998763211               334467777777554 3 6788888888743  33333320   0 0  1111


Q ss_pred             EECCCCCeEEEeecCCeEEE-ecccCce-eeeec-ccC--Ccee-EEEECC-CCCEEEEEecCCeEEEEEccCCC-----
Q psy15191        143 KFGPRGDYIIAHGFQGSLHL-DVTTWKQ-IQTLP-CHQ--LTIT-QLAFSP-DDTHLVSVSRDRRWGLYKRQSSG-----  210 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~~~i~~-d~~~~~~-~~~~~-~~~--~~v~-~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~-----  210 (312)
                      .. .+..+++.+.+.....+ .-.+.+. ..... -+.  .++. .-.|.+ +|++++...+ |.|.+.|+....     
T Consensus       154 ~t-~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~  231 (352)
T TIGR02658       154 PT-ANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLP  231 (352)
T ss_pred             Ee-cCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecc
Confidence            11 11222222221112221 0001111 11100 000  0000 003455 8888877766 999999965432     


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeeccC
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG  280 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (312)
                      ....+........-....+.-++++|+++.++....          .+.|.++|..+..            .+..+.. .
T Consensus       232 ~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k------------vi~~i~v-G  298 (352)
T TIGR02658       232 AIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK------------RLRKIEL-G  298 (352)
T ss_pred             eeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe------------EEEEEeC-C
Confidence            222222211111113334445999999988877431          2479999987763            4444442 4


Q ss_pred             cceeEEEeccCCC-eEEEEe
Q psy15191        281 YEIYSLAASHDGT-LLASAC  299 (312)
Q Consensus       281 ~~v~~~~~s~~~~-~l~s~s  299 (312)
                      ..+..++++||++ +|.+..
T Consensus       299 ~~~~~iavS~Dgkp~lyvtn  318 (352)
T TIGR02658       299 HEIDSINVSQDAKPLLYALS  318 (352)
T ss_pred             CceeeEEECCCCCeEEEEeC
Confidence            5788999999999 777664

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1409|consensus

Probab=99.29  E-value=2.7e-10  Score=87.32  Aligned_cols=155  Identities=16%  Similarity=0.196  Sum_probs=112.6

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC-----CCCCceEEEEeCCCcEEE
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD-----DSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~-----~~~~~~l~~~~~d~~i~i  113 (312)
                      .++....|...|..+-|+..      ..++++.+.|..+.---.+.+..+.-.....     .-+-.+...|...|.|.+
T Consensus       106 ~~r~~~~h~~~v~~~if~~~------~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~  179 (404)
T KOG1409|consen  106 FLKDYLAHQARVSAIVFSLT------HEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITM  179 (404)
T ss_pred             hhhhhhhhhcceeeEEecCC------ceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEE
Confidence            34555679999999999887      6799999999887766666655432211111     111114455666677766


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee------eecccCCceeEEEECC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ------TLPCHQLTITQLAFSP  187 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~------~~~~~~~~v~~~~~~~  187 (312)
                      -.+.......+.     .+.+|...+.+++|.|....|.+|..|..+.+    |++..      .+.+|...|..+...+
T Consensus       180 lr~~~~~~~~i~-----~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~----wdigg~~g~~~el~gh~~kV~~l~~~~  250 (404)
T KOG1409|consen  180 LKLEQNGCQLIT-----TFNGHTGEVTCLKWDPGQRLLFSGASDHSVIM----WDIGGRKGTAYELQGHNDKVQALSYAQ  250 (404)
T ss_pred             EEEeecCCceEE-----EEcCcccceEEEEEcCCCcEEEeccccCceEE----EeccCCcceeeeeccchhhhhhhhhhh
Confidence            655443333333     33589999999999999999999999999999    65432      3458899999998888


Q ss_pred             CCCEEEEEecCCeEEEEEccC
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      --+.+++++.||.|.+|++..
T Consensus       251 ~t~~l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  251 HTRQLISCGEDGGIVVWNMNV  271 (404)
T ss_pred             hheeeeeccCCCeEEEEeccc
Confidence            888999999999999999986

>KOG4190|consensus

Probab=99.26  E-value=3.7e-11  Score=97.82  Aligned_cols=263  Identities=16%  Similarity=0.228  Sum_probs=174.9

Q ss_pred             EEEEeccCCCceEEEE-------------------EeCCC-------CceEEEEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191         16 VLYTLTNHKSKVMAVK-------------------WNGEG-------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~-------------------w~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      .+..+.||...|..+.                   |+...       ..+..+++.|..+|.++.|..+      .++++
T Consensus       727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~------lr~i~  800 (1034)
T KOG4190|consen  727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD------LRSIA  800 (1034)
T ss_pred             eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec------cceee
Confidence            3455667777666554                   66532       2467788899999999999988      67777


Q ss_pred             EecCCCcEEEeeecCCcccc-------------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         70 SCSLDKTAILWKYVSEGNYL-------------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      ++  ||-|.+||.--++.+.             +.+.+.-.....++.++...+|+++|.+.  +.+....++...++.+
T Consensus       801 Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRs--ce~~~E~kVcna~~Pn  876 (1034)
T KOG4190|consen  801 SC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARS--CEWTCELKVCNAPGPN  876 (1034)
T ss_pred             ec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccc--ccceeeEEeccCCCCc
Confidence            65  7899999976665422             22222111112344558889999999988  5566666666666777


Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEE-EEccCCCeEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGL-YKRQSSGRLSL  214 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~-wd~~~~~~~~~  214 (312)
                      ..+.+++..+.|+.++++-.+|.+.+ |.++++.+...+........++- |..+.|+....|.++.+ |..-.+.....
T Consensus       877 a~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaa-psdq~L~~saldHslaVnWhaldgimh~q  955 (1034)
T KOG4190|consen  877 ALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAA-PSDQALAQSALDHSLAVNWHALDGIMHLQ  955 (1034)
T ss_pred             hheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcC-chhHHHHhhcccceeEeeehhcCCeeeec
Confidence            88999999999999999999999988 99999988877655555555553 66677888888999888 87665444333


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee--ccCcceeEEEeccCC
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY--GHGYEIYSLAASHDG  292 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~  292 (312)
                      ...+....  |-       +-.-|.-|+++...+.+.+|.-........        .+.++.  ...+..++++--|-.
T Consensus       956 ~kpppepa--hf-------lqsvgpSLV~a~~Gn~lgVYad~a~~ha~s--------titKiR~d~f~G~lTala~LPLN 1018 (1034)
T KOG4190|consen  956 DKPPPEPA--HF-------LQSVGPSLVTAQNGNILGVYADSAELHAES--------TITKIRPDEFPGTLTALAPLPLN 1018 (1034)
T ss_pred             cCCCCcch--hh-------hhccCceeEEeccCcEEEEEecchhhhhhh--------hhccccccccCCccceeeecccc
Confidence            33221111  10       112355688888888888884322111110        111221  234567888888888


Q ss_pred             CeEEEEecCCCcccceEEe
Q psy15191        293 TLLASACKATKPEHAAIII  311 (312)
Q Consensus       293 ~~l~s~s~d~~~~dg~i~i  311 (312)
                      .-+..|     .+.|.|.+
T Consensus      1019 ~afLaG-----ne~G~IaL 1032 (1034)
T KOG4190|consen 1019 CAFLAG-----NEHGAIAL 1032 (1034)
T ss_pred             chhhcc-----CCCCceee
Confidence            777788     56666765

>KOG1064|consensus

Probab=99.22  E-value=8.2e-11  Score=107.46  Aligned_cols=178  Identities=16%  Similarity=0.220  Sum_probs=134.5

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------cccccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------YLPYHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------~~~~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      .+-..|.++.-+|.      ..+.+||+.||.|++|....++.         ..+..+.+...|+.+..+..||.+.+|.
T Consensus      2206 ~~v~~v~r~~sHp~------~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q 2279 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPS------DPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQ 2279 (2439)
T ss_pred             cccCceeeecCCCC------CceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecc
Confidence            34456777777777      78899999999999998877665         2444555677888999999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee---cCCeEEEecccCceeee------ecccCCceeEEEEC
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG---FQGSLHLDVTTWKQIQT------LPCHQLTITQLAFS  186 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~~i~~d~~~~~~~~~------~~~~~~~v~~~~~~  186 (312)
                      ...        .+......|......+.|-.  ..+++++   .++.+.+    |+....      -..|.+.++++++-
T Consensus      2280 ~~p--------k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~l----wDtl~~~~~s~v~~~H~~gaT~l~~~ 2345 (2439)
T KOG1064|consen 2280 ASP--------KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCL----WDTLLPPMNSLVHTCHDGGATVLAYA 2345 (2439)
T ss_pred             cCC--------cceeccccCCccccceeeee--hhhhccccCCCCCcccc----hhcccCcccceeeeecCCCceEEEEc
Confidence            872        11222235677777777765  4455544   4677888    654322      14799999999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |..+.|++|+.+|.|++||++..+....+..                +. ...++++|+..|.|+||++....
T Consensus      2346 P~~qllisggr~G~v~l~D~rqrql~h~~~~----------------~~-~~~~f~~~ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2346 PKHQLLISGGRKGEVCLFDIRQRQLRHTFQA----------------LD-TREYFVTGSSEGNIKIWRLSEFG 2401 (2439)
T ss_pred             CcceEEEecCCcCcEEEeehHHHHHHHHhhh----------------hh-hhheeeccCcccceEEEEccccc
Confidence            9999999999999999999997655543331                44 56789999999999999998764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.22  E-value=2.4e-08  Score=80.26  Aligned_cols=206  Identities=12%  Similarity=0.034  Sum_probs=140.5

Q ss_pred             CCCCceEEEecCCCcEEEeeecCCcccccc-------------------ccc-C-CCCCceEEEEeCCCcEEEEcCCCCc
Q psy15191         62 DPEHKDLVSCSLDKTAILWKYVSEGNYLPY-------------------HMR-D-DSKQLHLLSCSMDKSIIVWAPDPTT  120 (312)
Q Consensus        62 ~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-------------------~~~-~-~~~~~~l~~~~~d~~i~i~d~~~~~  120 (312)
                      +.||+.++- +.-|.|.++|.++.....+-                   ++. + -.+|.+++..+. |+..+.+...+-
T Consensus       275 nsDGkrIvF-q~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~  352 (668)
T COG4946         275 NSDGKRIVF-QNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGY  352 (668)
T ss_pred             CCCCcEEEE-ecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCe
Confidence            455666554 34577999998776541100                   000 0 124556666665 455665544321


Q ss_pred             ceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        121 GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                        .   .+    -++...|.-..+.-+++-++.|..|| .+-+ |..+.+..... ..-+.|..+..+|+|++++.+...
T Consensus       353 --~---iq----v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e-~~lg~I~av~vs~dGK~~vvaNdr  422 (668)
T COG4946         353 --S---IQ----VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIE-KDLGNIEAVKVSPDGKKVVVANDR  422 (668)
T ss_pred             --e---EE----cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEee-CCccceEEEEEcCCCcEEEEEcCc
Confidence              1   11    14555677777777888899999998 6666 77766655444 466789999999999999999988


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC----eEEEEecCCCCCCcccccccccceeE
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG----VCVVWGLGEPPTEEDLVQNTLWPEVQ  274 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~  274 (312)
                      ..|.+.|+.++.....-+.       ..+-|+.++|+|+++++|.+--+|    .|+++|+..+             .+.
T Consensus       423 ~el~vididngnv~~idkS-------~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~-------------Kiy  482 (668)
T COG4946         423 FELWVIDIDNGNVRLIDKS-------EYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG-------------KIY  482 (668)
T ss_pred             eEEEEEEecCCCeeEeccc-------ccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC-------------eEE
Confidence            9999999998765433222       556799999999999999887666    7999999887             344


Q ss_pred             EeeccCcceeEEEeccCCCeEEEEe
Q psy15191        275 KLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       275 ~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ......+.=.+-+|.|++++|-.-|
T Consensus       483 ~vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         483 DVTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             EecCCcccccCcccCCCCcEEEEEe
Confidence            4444444445678899998775543

>KOG1064|consensus

Probab=99.21  E-value=8.1e-11  Score=107.51  Aligned_cols=178  Identities=16%  Similarity=0.244  Sum_probs=131.2

Q ss_pred             cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCce
Q psy15191         90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQ  169 (312)
Q Consensus        90 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~  169 (312)
                      +..+..+|...+.++|+.||.+++|....+........     .+. ..|+.+.|+.+|+.+.++..||.+.+    |+.
T Consensus      2211 v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt-----~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l----~q~ 2280 (2439)
T KOG1064|consen 2211 VRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRT-----AGN-SRVTRSRFNHQGNKFGIVDGDGDLSL----WQA 2280 (2439)
T ss_pred             eeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeec-----cCc-chhhhhhhcccCCceeeeccCCceee----ccc
Confidence            33444456666899999999999998877544333222     133 78999999999999999999999999    654


Q ss_pred             ----eeeecccCCceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE
Q psy15191        170 ----IQTLPCHQLTITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL  242 (312)
Q Consensus       170 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  242 (312)
                          ....+.|+.....+.|-.  ..+++++   .++.+.+||..-......+...      |.+.++++++-|..++|+
T Consensus      2281 ~pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~------H~~gaT~l~~~P~~qlli 2352 (2439)
T KOG1064|consen 2281 SPKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTC------HDGGATVLAYAPKHQLLI 2352 (2439)
T ss_pred             CCcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeee------cCCCceEEEEcCcceEEE
Confidence                444558888888888865  5667654   4688999997654443333311      889999999999999999


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|+.+|.|++||++...            ....++.         +. ...++++|+.     .|.|+||
T Consensus      2353 sggr~G~v~l~D~rqrq------------l~h~~~~---------~~-~~~~f~~~ss-----~g~ikIw 2395 (2439)
T KOG1064|consen 2353 SGGRKGEVCLFDIRQRQ------------LRHTFQA---------LD-TREYFVTGSS-----EGNIKIW 2395 (2439)
T ss_pred             ecCCcCcEEEeehHHHH------------HHHHhhh---------hh-hhheeeccCc-----ccceEEE
Confidence            99999999999997653            2222221         44 5678889954     4449988

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.20  E-value=2.7e-07  Score=74.22  Aligned_cols=228  Identities=10%  Similarity=0.075  Sum_probs=138.2

Q ss_pred             eCCCCeEEEEecc---------CCCceEEEEEeCCCCceEEEEccccC-------cEEEEEEecCcCcCCCCceEEEec-
Q psy15191         10 NGEGGKVLYTLTN---------HKSKVMAVKWNGEGGKVLYTLTNHKS-------KVMAVKWVLNTSLDPEHKDLVSCS-   72 (312)
Q Consensus        10 ~~~~~~~~~~~~~---------h~~~v~~~~w~~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~~~~~~~l~s~~-   72 (312)
                      -..+|+.++....         ..+.| .+ ||+.+++.+..+.-...       ....++++|+      |++|+... 
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V-~v-~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~d------gk~l~V~n~  124 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYV-EV-IDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPD------NKTLLFYQF  124 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEE-EE-EECccCcEEeEEccCCCchhhccCccceEEECCC------CCEEEEecC
Confidence            4455777766654         22332 23 89999999988874322       2336677777      99888665 


Q ss_pred             C-CCcEEEeeecCCcccccccccCCCCCceEEEE--------eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE-E
Q psy15191         73 L-DKTAILWKYVSEGNYLPYHMRDDSKQLHLLSC--------SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG-C  142 (312)
Q Consensus        73 ~-dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~--------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~-~  142 (312)
                      . +..|.+.|+.+++.....-.+   ++..++..        +.||......+.+.........+.  +.....++.. -
T Consensus       125 ~p~~~V~VvD~~~~kvv~ei~vp---~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~v--f~~~~~~v~~rP  199 (352)
T TIGR02658       125 SPSPAVGVVDLEGKAFVRMMDVP---DCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEV--FHPEDEYLINHP  199 (352)
T ss_pred             CCCCEEEEEECCCCcEEEEEeCC---CCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeee--ecCCccccccCC
Confidence            3 689999999998875433332   22233333        344544443333221111111111  1110000000 0


Q ss_pred             EECC-CCCeEEEeecCCeEEE-ecccC-----ceeeeec-------ccCCceeEEEECCCCCEEEEEec----------C
Q psy15191        143 KFGP-RGDYIIAHGFQGSLHL-DVTTW-----KQIQTLP-------CHQLTITQLAFSPDDTHLVSVSR----------D  198 (312)
Q Consensus       143 ~~~~-~~~~l~~~~~~~~i~~-d~~~~-----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~----------d  198 (312)
                      .|.+ +++++.+... |.|.+ |+..-     .....+.       -..+.+.-++++|+++.++....          .
T Consensus       200 ~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~  278 (352)
T TIGR02658       200 AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTAS  278 (352)
T ss_pred             ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCC
Confidence            3455 7887777666 88888 74322     2111111       12334455999999998887431          2


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEec-cCCeEEEEecCCCC
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTIS-RDGVCVVWGLGEPP  259 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~~  259 (312)
                      +.|.++|..+.+.+..+.        -...+..++++||++ +|++.. .++.|.++|..+..
T Consensus       279 ~~V~ViD~~t~kvi~~i~--------vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k  333 (352)
T TIGR02658       279 RFLFVVDAKTGKRLRKIE--------LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGK  333 (352)
T ss_pred             CEEEEEECCCCeEEEEEe--------CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCe
Confidence            579999999999888877        445688999999999 777666 57889999998874

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.20  E-value=1.1e-09  Score=83.06  Aligned_cols=232  Identities=15%  Similarity=0.157  Sum_probs=144.4

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------------------------cccccccCCCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------------------------YLPYHMRDDSK   98 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------------------------~~~~~~~~~~~   98 (312)
                      ...|+++.|...      |.+|++|...|.|.++..+....                            ..+.+.... .
T Consensus        26 ad~ItaVefd~t------g~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t-~   98 (460)
T COG5170          26 ADKITAVEFDET------GLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDT-G   98 (460)
T ss_pred             cceeeEEEeccc------cceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCC-C
Confidence            467899999888      89999999999999997655431                            123333222 2


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeee-----------------------------------eee-ecccCCCccceeEE
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLE-----------------------------------TAR-VGEVGGNTLGFYGC  142 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~-----------------------------------~~~-~~~~~~~~~~v~~~  142 (312)
                      ...++..+.|.+|++|.+.......+.                                   ..+ ......|...+.++
T Consensus        99 r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSi  178 (460)
T COG5170          99 RNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSI  178 (460)
T ss_pred             cceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeee
Confidence            336788889999999987654111000                                   000 00113466678889


Q ss_pred             EECCCCCeEEEeecCCeEEEecccCceeee--------eccc-----CCceeEEEECCC-CCEEEEEecCCeEEEEEccC
Q psy15191        143 KFGPRGDYIIAHGFQGSLHLDVTTWKQIQT--------LPCH-----QLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~--------~~~~-----~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~  208 (312)
                      .|+.|...++++ .+-.|.+    |++...        .+.|     ..-|++..|+|. .+.+...+..|.|++-|++.
T Consensus       179 S~NsD~et~lSa-DdLrINL----Wnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq  253 (460)
T COG5170         179 SFNSDKETLLSA-DDLRINL----WNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQ  253 (460)
T ss_pred             eecCchheeeec-cceeeee----ccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhh
Confidence            999988888775 4555666    554321        1122     345788899994 45677778899999999984


Q ss_pred             CCeE----EEEec---cCCCCc--ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeecc
Q psy15191        209 SGRL----SLVAC---SDKTNG--VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH  279 (312)
Q Consensus       209 ~~~~----~~~~~---~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  279 (312)
                      ....    ..+..   .....+  .....|..+.|+++|+|+++-.. -+|+|||++....           ++.++.-|
T Consensus       254 ~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~-----------pikTi~~h  321 (460)
T COG5170         254 SALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKN-----------PIKTIPMH  321 (460)
T ss_pred             hhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccC-----------CceeechH
Confidence            2211    00100   000000  03456888999999999987554 3799999987653           34444333


Q ss_pred             C------------cce---eEEEeccCCCeEEEEecCC
Q psy15191        280 G------------YEI---YSLAASHDGTLLASACKAT  302 (312)
Q Consensus       280 ~------------~~v---~~~~~s~~~~~l~s~s~d~  302 (312)
                      .            ..|   ..+.||-|.+.+.+||..+
T Consensus       322 ~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~N  359 (460)
T COG5170         322 CDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSN  359 (460)
T ss_pred             HHHHHHHHhhhhccceeeeEEEEecCCccccccccccc
Confidence            2            122   2467787777777776543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.18  E-value=7e-08  Score=89.36  Aligned_cols=251  Identities=14%  Similarity=0.046  Sum_probs=137.3

Q ss_pred             EEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------------cccccCCCCCceEEEE-eCCC
Q psy15191         52 AVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------------PYHMRDDSKQLHLLSC-SMDK  109 (312)
Q Consensus        52 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------------~~~~~~~~~~~~l~~~-~~d~  109 (312)
                      .+++.+.     ++.++++-+..+.|+++|........                     +.-+...+++..|+.+ ..++
T Consensus       572 gvavd~~-----~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~  646 (1057)
T PLN02919        572 KLAIDLL-----NNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENH  646 (1057)
T ss_pred             eEEEECC-----CCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCc
Confidence            4556543     25677777788899999976432210                     1111123344444444 4456


Q ss_pred             cEEEEcCCCCcceeeeeeee--cccCC-------CccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeee-----
Q psy15191        110 SIIVWAPDPTTGLWLETARV--GEVGG-------NTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTL-----  173 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~--~~~~~-------~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~-----  173 (312)
                      .|+++|..+.....+...-.  ....+       .-.....++++| ++..+++...++.|++ |..+.......     
T Consensus       647 ~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~  726 (1057)
T PLN02919        647 ALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYE  726 (1057)
T ss_pred             eEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcc
Confidence            78888876643221111000  00000       012346899999 5556666667778877 55544332110     


Q ss_pred             ---cc------cCCceeEEEECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccC----C--CCc--------ccceee
Q psy15191        174 ---PC------HQLTITQLAFSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSD----K--TNG--------VHKRII  229 (312)
Q Consensus       174 ---~~------~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~----~--~~~--------~~~~~v  229 (312)
                         .+      .-.....|+++|+++.| ++-+.++.|++||+.+........+..    .  ...        ..-...
T Consensus       727 ~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P  806 (1057)
T PLN02919        727 RNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHP  806 (1057)
T ss_pred             ccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCC
Confidence               00      11235679999999855 455667999999998765322211100    0  000        011234


Q ss_pred             EEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc-cccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccce
Q psy15191        230 WGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN-TLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAA  308 (312)
Q Consensus       230 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~  308 (312)
                      .+++++++|.++++-+.++.|++||..++......-.. ..+..-....+.-.....++++++|+++++-+.     ++.
T Consensus       807 ~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~-----Nn~  881 (1057)
T PLN02919        807 LGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTN-----NSL  881 (1057)
T ss_pred             ceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECC-----CCE
Confidence            58999999999999999999999998765211000000 000000001112235778999999998888844     445


Q ss_pred             EEeC
Q psy15191        309 IIIW  312 (312)
Q Consensus       309 i~iW  312 (312)
                      |++|
T Consensus       882 Irvi  885 (1057)
T PLN02919        882 IRYL  885 (1057)
T ss_pred             EEEE
Confidence            9886

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.16  E-value=4.9e-08  Score=73.62  Aligned_cols=228  Identities=14%  Similarity=0.161  Sum_probs=121.3

Q ss_pred             EeCCCCeEEEEeccCCCceEEEE--EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191          9 VNGEGGKVLYTLTNHKSKVMAVK--WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG   86 (312)
Q Consensus         9 ~~~~~~~~~~~~~~h~~~v~~~~--w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~   86 (312)
                      .-..+|+.++.++...-.|....  |+.--+++ ..-+...-.=..++|+|+      +.+||.+...|+|+++|+...+
T Consensus         4 ~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kc-qVpkD~~PQWRkl~WSpD------~tlLa~a~S~G~i~vfdl~g~~   76 (282)
T PF15492_consen    4 ALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKC-QVPKDPNPQWRKLAWSPD------CTLLAYAESTGTIRVFDLMGSE   76 (282)
T ss_pred             eecCCCcEEEEEeccEEEEEeccCCchheeEEE-ecCCCCCchheEEEECCC------CcEEEEEcCCCeEEEEecccce
Confidence            34577999998886554554432  21111222 122233334567899998      9999999999999999997654


Q ss_pred             cc-----------------ccccccCC--CC-CceEEEEeCCCcEEEEcCCCCcce-eeeeeeecccCCCccceeEEEEC
Q psy15191         87 NY-----------------LPYHMRDD--SK-QLHLLSCSMDKSIIVWAPDPTTGL-WLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        87 ~~-----------------~~~~~~~~--~~-~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      ..                 .+.+....  +. ...|++-...|.++-|-+..++.. ........-.......|.++.++
T Consensus        77 lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~  156 (282)
T PF15492_consen   77 LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYH  156 (282)
T ss_pred             eEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEc
Confidence            42                 11111111  11 224666666777776655321111 11111111112345678999999


Q ss_pred             CCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCE--EEEEecCCe------EEEEEccCCCeEEEEec
Q psy15191        146 PRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTH--LVSVSRDRR------WGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~d~~------i~~wd~~~~~~~~~~~~  217 (312)
                      |..++|++|+....-.-         .-.+....+++-..-.+..+  .++...|+.      ..+|.+-+.   ..+..
T Consensus       157 p~h~LLlVgG~~~~~~~---------~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~---~~fs~  224 (282)
T PF15492_consen  157 PKHRLLLVGGCEQNQDG---------MSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSF---KFFSR  224 (282)
T ss_pred             CCCCEEEEeccCCCCCc---------cccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccce---eeeec
Confidence            99888887764322100         00011112222221111111  112222221      123332211   11111


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ..    .....|..|..||||+.||+...+|.|.+|++..-.
T Consensus       225 ~~----~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~  262 (282)
T PF15492_consen  225 QG----QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLR  262 (282)
T ss_pred             cc----cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcch
Confidence            10    045678999999999999999999999999997753

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.14  E-value=6e-07  Score=70.02  Aligned_cols=218  Identities=17%  Similarity=0.056  Sum_probs=131.4

Q ss_pred             EEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----cccccCC-CCCceEEEEeCCCcEEEEcCCCCcceeee
Q psy15191         52 AVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----PYHMRDD-SKQLHLLSCSMDKSIIVWAPDPTTGLWLE  125 (312)
Q Consensus        52 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  125 (312)
                      ++.|.+.     ++.++++--..+.|..|+..++....     ..-+... +++ .++.+...+ +.++|+.+++...+.
T Consensus         4 gp~~d~~-----~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~~~~   76 (246)
T PF08450_consen    4 GPVWDPR-----DGRLYWVDIPGGRIYRVDPDTGEVEVIDLPGPNGMAFDRPDG-RLYVADSGG-IAVVDPDTGKVTVLA   76 (246)
T ss_dssp             EEEEETT-----TTEEEEEETTTTEEEEEETTTTEEEEEESSSEEEEEEECTTS-EEEEEETTC-EEEEETTTTEEEEEE
T ss_pred             ceEEECC-----CCEEEEEEcCCCEEEEEECCCCeEEEEecCCCceEEEEccCC-EEEEEEcCc-eEEEecCCCcEEEEe
Confidence            4567662     26777777778888888887765421     1111112 333 555555544 455588875443333


Q ss_pred             eeeecccCCCccceeEEEECCCCCeEEEeecC--------CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEE-EE
Q psy15191        126 TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ--------GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLV-SV  195 (312)
Q Consensus       126 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~  195 (312)
                      ...  ........++.+++.|+|++.++....        |.+.. +.. .+...... .-...+.|+|+|+++.|+ +-
T Consensus        77 ~~~--~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~d  152 (246)
T PF08450_consen   77 DLP--DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVAD  152 (246)
T ss_dssp             EEE--TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEE
T ss_pred             ecc--CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecc
Confidence            321  111145678899999999977665432        34444 554 33333332 345578999999998776 55


Q ss_pred             ecCCeEEEEEccCCCe-EE---EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191        196 SRDRRWGLYKRQSSGR-LS---LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP  271 (312)
Q Consensus       196 ~~d~~i~~wd~~~~~~-~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  271 (312)
                      +..+.|..+++..... +.   .+.....    .....-.+++.++|++.++....+.|.+++.. +.            
T Consensus       153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~------------  215 (246)
T PF08450_consen  153 SFNGRIWRFDLDADGGELSNRRVFIDFPG----GPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GK------------  215 (246)
T ss_dssp             TTTTEEEEEEEETTTCCEEEEEEEEE-SS----SSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SC------------
T ss_pred             cccceeEEEeccccccceeeeeeEEEcCC----CCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-cc------------
Confidence            6778899999875433 21   1211100    12347789999999998888888999999976 32            


Q ss_pred             eeEEeeccCcceeEEEec-cCCCeEEE
Q psy15191        272 EVQKLYGHGYEIYSLAAS-HDGTLLAS  297 (312)
Q Consensus       272 ~~~~~~~~~~~v~~~~~s-~~~~~l~s  297 (312)
                      .+..+.-....+++++|. ++.+.|..
T Consensus       216 ~~~~i~~p~~~~t~~~fgg~~~~~L~v  242 (246)
T PF08450_consen  216 LLREIELPVPRPTNCAFGGPDGKTLYV  242 (246)
T ss_dssp             EEEEEE-SSSSEEEEEEESTTSSEEEE
T ss_pred             EEEEEcCCCCCEEEEEEECCCCCEEEE
Confidence            455555555588999994 66554443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.13  E-value=8.8e-08  Score=87.15  Aligned_cols=189  Identities=14%  Similarity=0.173  Sum_probs=121.2

Q ss_pred             ccCCCCCceEEEEeCCCcEEEE----cCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCc
Q psy15191         93 MRDDSKQLHLLSCSMDKSIIVW----APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWK  168 (312)
Q Consensus        93 ~~~~~~~~~l~~~~~d~~i~i~----d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~  168 (312)
                      ..+-++...++.+..+|.|.+.    +........+-        .-...|.+++||||+..|+..+.++.+.+=.++|+
T Consensus        81 ~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG--------~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd  152 (928)
T PF04762_consen   81 FQYLADSESLCIALASGDIILVREDPDPDEDEIEIVG--------SVDSGILAASWSPDEELLALVTGEGNLLLMTRDFD  152 (928)
T ss_pred             EEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEE--------EEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccce
Confidence            3334455578888899999998    55543332222        23467999999999999999998988877344455


Q ss_pred             eeeeec------------------------c------------------------cCCceeEEEECCCCCEEEEEec---
Q psy15191        169 QIQTLP------------------------C------------------------HQLTITQLAFSPDDTHLVSVSR---  197 (312)
Q Consensus       169 ~~~~~~------------------------~------------------------~~~~v~~~~~~~~~~~l~~~~~---  197 (312)
                      ++....                        |                        ....-..++|-.||.++|+.+.   
T Consensus       153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~  232 (928)
T PF04762_consen  153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPE  232 (928)
T ss_pred             EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcC
Confidence            443321                        0                        1123356889999999998875   


Q ss_pred             C---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc---CCeEEEEecCCCCCCcccccccccc
Q psy15191        198 D---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGVCVVWGLGEPPTEEDLVQNTLWP  271 (312)
Q Consensus       198 d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~  271 (312)
                      .   +.+++|+-. +. +.....+      ..+--.+++|-|.|+++|+...   ...|.+|.-+.-...         +
T Consensus       233 ~~~~R~iRVy~Re-G~-L~stSE~------v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhg---------e  295 (928)
T PF04762_consen  233 TGSRRVIRVYSRE-GE-LQSTSEP------VDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHG---------E  295 (928)
T ss_pred             CCceeEEEEECCC-ce-EEecccc------CCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEee---------e
Confidence            2   568999876 32 2222221      1222336899999999998764   345666654332111         0


Q ss_pred             eeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        272 EVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       272 ~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..-.+......|..++|++|+..||.--.     |. |.+|
T Consensus       296 F~l~~~~~~~~v~~l~Wn~ds~iLAv~~~-----~~-vqLW  330 (928)
T PF04762_consen  296 FTLRFDPEEEKVIELAWNSDSEILAVWLE-----DR-VQLW  330 (928)
T ss_pred             EecCCCCCCceeeEEEECCCCCEEEEEec-----CC-ceEE
Confidence            11112234567999999999999999742     22 7777

>KOG3914|consensus

Probab=99.13  E-value=9.2e-10  Score=86.08  Aligned_cols=156  Identities=12%  Similarity=0.141  Sum_probs=99.7

Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe---EEE-ecccCcee
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS---LHL-DVTTWKQI  170 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~---i~~-d~~~~~~~  170 (312)
                      .++.+.+++.+..+....++++...... ........   -....+++.|-.+......+..-|.   +.+ ....|..+
T Consensus        70 ~s~~~~llAv~~~~K~~~~f~~~~~~~~-~kl~~~~~---v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~  145 (390)
T KOG3914|consen   70 TSDSGRLVAVATSSKQRAVFDYRENPKG-AKLLDVSC---VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCE  145 (390)
T ss_pred             cCCCceEEEEEeCCCceEEEEEecCCCc-ceeeeEee---cccCcceeeeeeccceEEEEeecCCceeeeeecccccCcc
Confidence            3556667777777777667766543220 00011111   1122344555555555444444333   333 11123333


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                      . ..+|-..++.++++||+++++++..|..|++-.......+..+-..      |...|..++.-++ ..|+++|.|++|
T Consensus       146 ~-~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclG------H~eFVS~isl~~~-~~LlS~sGD~tl  217 (390)
T KOG3914|consen  146 P-ILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLG------HKEFVSTISLTDN-YLLLSGSGDKTL  217 (390)
T ss_pred             h-hhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccc------cHhheeeeeeccC-ceeeecCCCCcE
Confidence            2 2379999999999999999999999999999887654444333222      8889999998865 458999999999


Q ss_pred             EEEecCCCCCCc
Q psy15191        251 VVWGLGEPPTEE  262 (312)
Q Consensus       251 ~iwd~~~~~~~~  262 (312)
                      ++||+.++....
T Consensus       218 r~Wd~~sgk~L~  229 (390)
T KOG3914|consen  218 RLWDITSGKLLD  229 (390)
T ss_pred             EEEecccCCccc
Confidence            999999987553

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.12  E-value=1.3e-07  Score=78.66  Aligned_cols=215  Identities=13%  Similarity=0.053  Sum_probs=117.8

Q ss_pred             ceEEEecCCCcEEEeeecCCcccccc------------cccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccC
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNYLPY------------HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVG  133 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~~~~------------~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  133 (312)
                      ..++.+..+|.+..+|..+++..-..            ..+.- .+..++.+..++.+..+|.++++..+..........
T Consensus       146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~-~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~  224 (377)
T TIGR03300       146 GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI-ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGR  224 (377)
T ss_pred             CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCC
Confidence            35666667888888888776641000            00011 123567777888888888887655443221100000


Q ss_pred             CCccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC
Q psy15191        134 GNTLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG  210 (312)
Q Consensus       134 ~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  210 (312)
                      ........+.-+|  .+..+++++.+|.+.. |.++++..-... ... .....  .++..++.++.+|.+..+|..+++
T Consensus       225 ~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~-~~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~  300 (377)
T TIGR03300       225 TELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRD-ASS-YQGPA--VDDNRLYVTDADGVVVALDRRSGS  300 (377)
T ss_pred             CchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeec-cCC-ccCce--EeCCEEEEECCCCeEEEEECCCCc
Confidence            0000000010111  2456777778888777 877776655443 111 11222  246678888899999999998877


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee-EEEec
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY-SLAAS  289 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s  289 (312)
                      .+......      ..........  .+..|++++.+|.|+++|..++.            .+..+..+...+. +.++ 
T Consensus       301 ~~W~~~~~------~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~------------~~~~~~~~~~~~~~sp~~-  359 (377)
T TIGR03300       301 ELWKNDEL------KYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGS------------FVARLKTDGSGIASPPVV-  359 (377)
T ss_pred             EEEccccc------cCCccccCEE--ECCEEEEEeCCCEEEEEECCCCC------------EEEEEEcCCCccccCCEE-
Confidence            65433211      0111111122  35688889999999999988773            4555554443332 2233 


Q ss_pred             cCCCeEEEEecCCCcccceEEeC
Q psy15191        290 HDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       290 ~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .++ .|..++.||.     |+.+
T Consensus       360 ~~~-~l~v~~~dG~-----l~~~  376 (377)
T TIGR03300       360 VGD-GLLVQTRDGD-----LYAF  376 (377)
T ss_pred             ECC-EEEEEeCCce-----EEEe
Confidence            233 4777754444     7653

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG3914|consensus

Probab=99.11  E-value=1.2e-09  Score=85.55  Aligned_cols=144  Identities=15%  Similarity=0.164  Sum_probs=95.2

Q ss_pred             CCceEEEecCCCcEEEeeecCCcc----c----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGN----Y----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV  129 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~----~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  129 (312)
                      .++++|.+..+....++++.....    .          .+.+.............+....+.+|....        ...
T Consensus        73 ~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~--------~~~  144 (390)
T KOG3914|consen   73 SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS--------GRC  144 (390)
T ss_pred             CceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccc--------cCc
Confidence            388888887777766766654432    1          122222222211122223333344444332        122


Q ss_pred             cccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        130 GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       130 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                      ....+|-..++.++++||+++++++..|..|++  -..+..+..-..+|+.-|..++.-++ ..|++++.|+++++||++
T Consensus       145 ~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~  223 (390)
T KOG3914|consen  145 EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDIT  223 (390)
T ss_pred             chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecc
Confidence            233478899999999999999999999999999  33334444444589999999999764 558999999999999999


Q ss_pred             CCCeEEEEe
Q psy15191        208 SSGRLSLVA  216 (312)
Q Consensus       208 ~~~~~~~~~  216 (312)
                      +++.+..+.
T Consensus       224 sgk~L~t~d  232 (390)
T KOG3914|consen  224 SGKLLDTCD  232 (390)
T ss_pred             cCCcccccc
Confidence            988775443

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.10  E-value=3.5e-10  Score=60.51  Aligned_cols=39  Identities=31%  Similarity=0.509  Sum_probs=36.8

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEee
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK   81 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~   81 (312)
                      ++++.++++|.++|++|+|+|+      +.+|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~------~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPD------GNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETT------SSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecc------cccceeeCCCCEEEEEC
Confidence            4678999999999999999999      89999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2066|consensus

Probab=99.10  E-value=1.2e-08  Score=86.77  Aligned_cols=187  Identities=11%  Similarity=0.073  Sum_probs=128.9

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeee
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA  127 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  127 (312)
                      ..+.|++++.        +.|+-|.-+|.|++.+....-.......+...+|.++++|+.||+|.|..+.+.+......+
T Consensus        40 D~is~~av~~--------~~~~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df  111 (846)
T KOG2066|consen   40 DAISCCAVHD--------KFFALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYDF  111 (846)
T ss_pred             hHHHHHHhhc--------ceeeeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence            4566666643        58999999999999987655322222223356788999999999999998877554433332


Q ss_pred             eecccCCCccceeEEEECCC-----CCeEEEeecCCeEEEec----ccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        128 RVGEVGGNTLGFYGCKFGPR-----GDYIIAHGFQGSLHLDV----TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       128 ~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~~~i~~d~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                              ..++.+++++|+     .+.+++|+.-| +.+.-    ..++.+ .+....++|.++.|.  |+++|=++.+
T Consensus       112 --------~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~--g~lIAWand~  179 (846)
T KOG2066|consen  112 --------KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR--GNLIAWANDD  179 (846)
T ss_pred             --------CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec--CcEEEEecCC
Confidence                    356889999997     56799999888 55532    233333 344567899999995  7778777655


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      | |++||+.+.+.+..++.+..... .......+.|.++.++ +.|=.| +|+|..++..
T Consensus       180 G-v~vyd~~~~~~l~~i~~p~~~~R-~e~fpphl~W~~~~~L-VIGW~d-~v~i~~I~~~  235 (846)
T KOG2066|consen  180 G-VKVYDTPTRQRLTNIPPPSQSVR-PELFPPHLHWQDEDRL-VIGWGD-SVKICSIKKR  235 (846)
T ss_pred             C-cEEEeccccceeeccCCCCCCCC-cccCCCceEecCCCeE-EEecCC-eEEEEEEecc
Confidence            5 89999999888877776553222 3334456888876554 444434 6899988743

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.10  E-value=1.3e-07  Score=78.93  Aligned_cols=178  Identities=13%  Similarity=-0.006  Sum_probs=107.3

Q ss_pred             cccCCCCCce-EEEEeC---CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cC--CeEEE-e
Q psy15191         92 HMRDDSKQLH-LLSCSM---DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQ--GSLHL-D  163 (312)
Q Consensus        92 ~~~~~~~~~~-l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~--~~i~~-d  163 (312)
                      ...++|++.. ++..+.   +..|.++|+.+++...+..        .........|+|||+.++... .+  ..|.+ |
T Consensus       192 ~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~--------~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d  263 (419)
T PRK04043        192 FPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS--------SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYD  263 (419)
T ss_pred             eEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec--------CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEE
Confidence            4555777764 544333   3568888988765433322        223345578999998876543 33  35666 7


Q ss_pred             cccCceeeeecccCCceeEEEECCCCCEEEEEecC-C--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce
Q psy15191        164 VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-R--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  240 (312)
                      +.+.+... +..+........|+|||+.|+..+.. +  .|++.|+.+++.......        ..  ....|+|+|++
T Consensus       264 l~~g~~~~-LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~--------g~--~~~~~SPDG~~  332 (419)
T PRK04043        264 TNTKTLTQ-ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH--------GK--NNSSVSTYKNY  332 (419)
T ss_pred             CCCCcEEE-cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC--------CC--cCceECCCCCE
Confidence            66555433 33233333456899999987776532 3  577788876554333221        11  12489999998


Q ss_pred             EEEeccC---------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        241 FLTISRD---------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       241 l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      |+..+..         ..|.+.|+..+.             ...+... .......|+|||++|+..+.++
T Consensus       333 Ia~~~~~~~~~~~~~~~~I~v~d~~~g~-------------~~~LT~~-~~~~~p~~SPDG~~I~f~~~~~  389 (419)
T PRK04043        333 IVYSSRETNNEFGKNTFNLYLISTNSDY-------------IRRLTAN-GVNQFPRFSSDGGSIMFIKYLG  389 (419)
T ss_pred             EEEEEcCCCcccCCCCcEEEEEECCCCC-------------eEECCCC-CCcCCeEECCCCCEEEEEEccC
Confidence            8866543         367888877662             2333322 2233588999999988886543

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.09  E-value=2e-07  Score=75.62  Aligned_cols=245  Identities=11%  Similarity=0.141  Sum_probs=148.8

Q ss_pred             EEEEeCCCCceEEEEccccCc--EE-EEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------ccccccC
Q psy15191         29 AVKWNGEGGKVLYTLTNHKSK--VM-AVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMRD   95 (312)
Q Consensus        29 ~~~w~~~~~~~~~~~~~h~~~--v~-~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~   95 (312)
                      +..||..+|.++..+.+-..+  .+ -+.|+-+      .+++|=. ....+.|+++ +....          .+.-...
T Consensus       110 ~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~------D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsi  181 (561)
T COG5354         110 VFVWDIASGMIVFSFNGISQPYLGWPVLKFSID------DKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSI  181 (561)
T ss_pred             eeEEeccCceeEeeccccCCcccccceeeeeec------chhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEe
Confidence            455999999999999887766  55 6778777      5555433 2346899986 33221          1111111


Q ss_pred             CCC--CceEEE-----EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-----------cC
Q psy15191         96 DSK--QLHLLS-----CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-----------FQ  157 (312)
Q Consensus        96 ~~~--~~~l~~-----~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~  157 (312)
                      +|.  ...|+.     ....+++++|.+...+......+.  .     ..=..+.|++.|+++++-.           ..
T Consensus       182 sP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf--k-----~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfge  254 (561)
T COG5354         182 SPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF--K-----VSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGE  254 (561)
T ss_pred             cCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE--e-----ecccEEEEecCCceEEEEEEEeeecccceecc
Confidence            221  112222     345566777776643322222211  1     1123578899998866421           12


Q ss_pred             CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        158 GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       158 ~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                      ..+.+ ++...++.... ...++|...+|.|.++.+++.+  .+-.+.++|++..  +...-.        ...=+.+.|
T Consensus       255 snLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~P--------e~~rNT~~f  323 (561)
T COG5354         255 SNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFP--------EQKRNTIFF  323 (561)
T ss_pred             ceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeecccccc--eEEecC--------Ccccccccc
Confidence            33455 55544444333 4678999999999988877655  6788999999866  222221        122235789


Q ss_pred             cCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC-cccceEE
Q psy15191        235 SHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK-PEHAAII  310 (312)
Q Consensus       235 ~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~-~~dg~i~  310 (312)
                      +|.+++++.++-|   |.+.+||......           .+..+.+  ...+-+.|+||++++.+.-..-. ..|..|.
T Consensus       324 sp~~r~il~agF~nl~gni~i~~~~~rf~-----------~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~  390 (561)
T COG5354         324 SPHERYILFAGFDNLQGNIEIFDPAGRFK-----------VAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIK  390 (561)
T ss_pred             cCcccEEEEecCCccccceEEeccCCceE-----------EEEEeec--CCceEeeccCCceEEEecCCCcccccCcceE
Confidence            9999999988765   5899998766521           3334443  23345689999998877654333 4577788


Q ss_pred             eC
Q psy15191        311 IW  312 (312)
Q Consensus       311 iW  312 (312)
                      ||
T Consensus       391 l~  392 (561)
T COG5354         391 LW  392 (561)
T ss_pred             EE
Confidence            87

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.08  E-value=4e-07  Score=84.49  Aligned_cols=205  Identities=10%  Similarity=0.038  Sum_probs=125.1

Q ss_pred             cEEEEEEecCcCcCCCCceEEEe-cCCCcEEEeeecCCccc------------------------ccccccCCC-CCceE
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSC-SLDKTAILWKYVSEGNY------------------------LPYHMRDDS-KQLHL  102 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vw~~~~~~~~------------------------~~~~~~~~~-~~~~l  102 (312)
                      ....+++.++      +..|+.+ ...+.|+++|+.++...                        ....+..++ ++..+
T Consensus       625 ~P~GIavd~~------gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~Ly  698 (1057)
T PLN02919        625 RPQGLAYNAK------KNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVY  698 (1057)
T ss_pred             CCcEEEEeCC------CCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEE
Confidence            3577888776      6655444 44567998887654321                        011122234 45566


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeee-eeccc------CCCccceeEEEECCCCCeEE-EeecCCeEEE-ecccCceeeee
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETA-RVGEV------GGNTLGFYGCKFGPRGDYII-AHGFQGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~------~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~  173 (312)
                      ++.+.++.|++||..++........ .....      ...-.....++++|+++.|+ +-..++.|++ |+.+.......
T Consensus       699 Vad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~  778 (1057)
T PLN02919        699 IAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA  778 (1057)
T ss_pred             EEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence            7777888999999876432111000 00000      01123467799999998555 4455678888 76654321100


Q ss_pred             -------------c--------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC------CCcccc
Q psy15191        174 -------------P--------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK------TNGVHK  226 (312)
Q Consensus       174 -------------~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------~~~~~~  226 (312)
                                   .        ..-.....++++++|+.+++-+.++.|++||..+............      .....-
T Consensus       779 gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l  858 (1057)
T PLN02919        779 GGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQL  858 (1057)
T ss_pred             ecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCccccccc
Confidence                         0        0011246889999999888888999999999986554432221100      000122


Q ss_pred             eeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        227 RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       227 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .....++++++|+++++-+.++.|++||+.++.
T Consensus       859 ~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~  891 (1057)
T PLN02919        859 SEPAGLALGENGRLFVADTNNSLIRYLDLNKGE  891 (1057)
T ss_pred             CCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence            356789999999999998999999999998764

>KOG1275|consensus

Probab=99.06  E-value=9.5e-09  Score=88.66  Aligned_cols=183  Identities=13%  Similarity=0.166  Sum_probs=128.3

Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      ++..++.|+--..+..+|+++.+.......       ....+.-++  .+++.+.+|...|.|.+ |+++.+.++++..|
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v-------~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH  216 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNV-------SASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAH  216 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeec-------cCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeecc
Confidence            334677788778888889887442221111       111244444  46788999999999999 99999999999999


Q ss_pred             CCceeEEEECCCCCEEEEEecC---------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEecc
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRD---------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISR  246 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~  246 (312)
                      .+.|..+..  .|+.|++|+..         .-|++||+|..+.+.-+..+.       + ..-+.|.|. ...++.++.
T Consensus       217 s~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~-------~-P~flrf~Psl~t~~~V~S~  286 (1118)
T KOG1275|consen  217 SGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY-------G-PQFLRFHPSLTTRLAVTSQ  286 (1118)
T ss_pred             ccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc-------C-chhhhhcccccceEEEEec
Confidence            999987766  68899998864         458999999877765554321       1 234677775 356788888


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|...+-|..+-.....        .+.-+......+.++++|++|+.||.|     ..+|.|.+|
T Consensus       287 sGq~q~vd~~~lsNP~~--------~~~~v~p~~s~i~~fDiSsn~~alafg-----d~~g~v~~w  339 (1118)
T KOG1275|consen  287 SGQFQFVDTATLSNPPA--------GVKMVNPNGSGISAFDISSNGDALAFG-----DHEGHVNLW  339 (1118)
T ss_pred             ccceeeccccccCCCcc--------ceeEEccCCCcceeEEecCCCceEEEe-----cccCcEeee
Confidence            89999988332211100        122222334559999999999999999     666669998

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.05  E-value=1.4e-07  Score=76.47  Aligned_cols=257  Identities=15%  Similarity=0.105  Sum_probs=141.7

Q ss_pred             CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------cccccccCCCC
Q psy15191         25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------YLPYHMRDDSK   98 (312)
Q Consensus        25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------~~~~~~~~~~~   98 (312)
                      +.+..+-|+..+...-..+....-++..++|||.      |.+|++.... .|.+|.-.....      ..+....++|.
T Consensus        10 s~~i~~f~~~~s~~~~~~~~~~~~p~~~~~~SP~------G~~l~~~~~~-~V~~~~g~~~~~l~~~~~~~V~~~~fSP~   82 (561)
T COG5354          10 SAVISVFWNSQSEVIHTRFESENWPVAYVSESPL------GTYLFSEHAA-GVECWGGPSKAKLVRFRHPDVKYLDFSPN   82 (561)
T ss_pred             cceEEEeecCccccccccccccCcchhheeecCc------chheehhhcc-ceEEccccchhheeeeecCCceecccCcc
Confidence            4455566888877777777767778999999999      9999987765 488898766554      24556667888


Q ss_pred             CceEEEEeCCC---------------cEEEEcCCCCcceeeeeeeecccCCCcccee-EEEECCCCCeEEEeecCCeEEE
Q psy15191         99 QLHLLSCSMDK---------------SIIVWAPDPTTGLWLETARVGEVGGNTLGFY-GCKFGPRGDYIIAHGFQGSLHL  162 (312)
Q Consensus        99 ~~~l~~~~~d~---------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~i~~  162 (312)
                      +.+|.+-+..+               .+.+||+.++  ..+..+.....   ..... -+.|+-+.++++-- ....+.+
T Consensus        83 ~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg--~iv~sf~~~~q---~~~~Wp~~k~s~~D~y~ARv-v~~sl~i  156 (561)
T COG5354          83 EKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASG--MIVFSFNGISQ---PYLGWPVLKFSIDDKYVARV-VGSSLYI  156 (561)
T ss_pred             cceeeeeccCCccChhhccCCccccCceeEEeccCc--eeEeeccccCC---cccccceeeeeecchhhhhh-ccCeEEE
Confidence            88888766543               4899999884  33333332111   11122 46677666655433 2233444


Q ss_pred             -ecccCceeee-ec-ccCCceeEEEECCCC--CEEEE-----EecCCeEEEEEccCCCeEEE------------------
Q psy15191        163 -DVTTWKQIQT-LP-CHQLTITQLAFSPDD--THLVS-----VSRDRRWGLYKRQSSGRLSL------------------  214 (312)
Q Consensus       163 -d~~~~~~~~~-~~-~~~~~v~~~~~~~~~--~~l~~-----~~~d~~i~~wd~~~~~~~~~------------------  214 (312)
                       ++ +.++... +. -....|....|+|.+  ..|+.     .+.++++++|.+.....+..                  
T Consensus       157 ~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~  235 (561)
T COG5354         157 HEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGK  235 (561)
T ss_pred             Eec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCc
Confidence             22 1111100 00 011334455555532  22222     23344455554433111110                  


Q ss_pred             ------------------------EeccC--CCCc-ccceeeEEEEEcCCCceEEEe--ccCCeEEEEecCCCCCCcccc
Q psy15191        215 ------------------------VACSD--KTNG-VHKRIIWGVAWSHDSRYFLTI--SRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       215 ------------------------~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~  265 (312)
                                              +....  .... ...++|...+|.|.++.+++.  -.+-.+.++|++..       
T Consensus       236 ~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-------  308 (561)
T COG5354         236 YLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-------  308 (561)
T ss_pred             eEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc-------
Confidence                                    00000  0000 146778889998888766544  46778888887664       


Q ss_pred             cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            ..  +......=+.+.|||.+++++.++-|+.  .|.|-+|
T Consensus       309 ------l~--~~~Pe~~rNT~~fsp~~r~il~agF~nl--~gni~i~  345 (561)
T COG5354         309 ------LR--FYFPEQKRNTIFFSPHERYILFAGFDNL--QGNIEIF  345 (561)
T ss_pred             ------eE--EecCCcccccccccCcccEEEEecCCcc--ccceEEe
Confidence                  12  1223344456677888888888777665  4445443

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=99.05  E-value=3e-07  Score=76.27  Aligned_cols=109  Identities=17%  Similarity=0.174  Sum_probs=77.6

Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      ..+..+.+++++|+...|+.|+.||+|.+||........ ..        ..-.++.++|+|+|.++++|+..|.+.+||
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~-~k--------a~~~P~~iaWHp~gai~~V~s~qGelQ~FD  327 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL-AK--------AEFIPTLIAWHPDGAIFVVGSEQGELQCFD  327 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee-ee--------ecccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence            577889999999999999999999999999987653322 22        334477899999999999999999999999


Q ss_pred             cCCCCCCccccccccc-c---eeEEeeccCcceeEEEeccCC
Q psy15191        255 LGEPPTEEDLVQNTLW-P---EVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~v~~~~~s~~~  292 (312)
                      +.-.+....+.....- +   .+.....+...+..+.|++..
T Consensus       328 ~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~~~L~~iqW~~~~  369 (545)
T PF11768_consen  328 MALSPIKMQLLSEDATPKSTLQLSKYFRVSSSLVHIQWAPAP  369 (545)
T ss_pred             eecCccceeeccccCCCccEEeeehhccCcchhheeEeccCC
Confidence            9876543332211100 0   112222345567778887543

>KOG2314|consensus

Probab=99.04  E-value=3.3e-07  Score=75.22  Aligned_cols=250  Identities=14%  Similarity=0.123  Sum_probs=143.2

Q ss_pred             CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------cccccccCCCC
Q psy15191         25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------YLPYHMRDDSK   98 (312)
Q Consensus        25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------~~~~~~~~~~~   98 (312)
                      .....+-|+.........-...+=.-+-+.|||.      |.||+|--..| |.+|--.+-..      ..+.+..++|.
T Consensus       188 ~~~~svfwN~~~n~p~~ie~RenWTetyv~wSP~------GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp~Vq~idfSP~  260 (698)
T KOG2314|consen  188 KTTVSVFWNSKFNEPSLIEERENWTETYVRWSPK------GTYLVTFHKQG-IALWGGESFDRIQRFYHPGVQFIDFSPN  260 (698)
T ss_pred             cceeEEEccccCCchhhhhhhhcceeeeEEecCC------ceEEEEEeccc-eeeecCccHHHHHhccCCCceeeecCCc
Confidence            3344555765543222221112223567899999      99999988776 88895433322      35666777888


Q ss_pred             CceEEEEeC-----------CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccC
Q psy15191         99 QLHLLSCSM-----------DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTW  167 (312)
Q Consensus        99 ~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~  167 (312)
                      ..+|++-+.           ...++|||+.++.  ....+...  ......-.-+.||.|++++|.-..++....+..+.
T Consensus       261 EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~--lkrsF~~~--~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf  336 (698)
T KOG2314|consen  261 EKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGL--LKRSFPVI--KSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSF  336 (698)
T ss_pred             cceEEEecCCccccCcccCCCceEEEEEccccc--hhcceecc--CCCccccceEEeccCCceeEEeccceEEEEecCce
Confidence            889988663           2579999999954  33333321  11222223478999999998766654333344444


Q ss_pred             ceeeeecccCCceeEEEECCCCCEEEEEecC-----Ce------------------------------------------
Q psy15191        168 KQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-----RR------------------------------------------  200 (312)
Q Consensus       168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~------------------------------------------  200 (312)
                      .+.....-.-..|....|+|.++.||.=+..     ..                                          
T Consensus       337 ~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~t  416 (698)
T KOG2314|consen  337 MLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHT  416 (698)
T ss_pred             eeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeec
Confidence            3333322233455666666665555432211     01                                          


Q ss_pred             ----------EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc---CCeEEEEecCCCCCCcccccc
Q psy15191        201 ----------WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       201 ----------i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~  267 (312)
                                +.|+.++........       ......|...+|-|.|..++.-+.   ..++.+|.++....       
T Consensus       417 K~~~~g~f~n~eIfrireKdIpve~-------velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~-------  482 (698)
T KOG2314|consen  417 KSKVKGQFSNLEIFRIREKDIPVEV-------VELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIK-------  482 (698)
T ss_pred             cccccceEeeEEEEEeeccCCCcee-------eecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCC-------
Confidence                      112222111100000       004566888899999987765442   34799998885422       


Q ss_pred             cccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        268 TLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                       .++.+..+..  ...+.+.|+|.|++++.+..-+
T Consensus       483 -~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s  514 (698)
T KOG2314|consen  483 -KPSLVKELDK--KFANTVFWSPKGRFVVVAALVS  514 (698)
T ss_pred             -chhhhhhhcc--cccceEEEcCCCcEEEEEEecc
Confidence             2234555543  4567899999999999986653

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.03  E-value=1.2e-06  Score=70.74  Aligned_cols=181  Identities=13%  Similarity=0.082  Sum_probs=121.7

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeee-eecccCCCcc---ceeEEE-ECC-CCCeEEEeecCCeEEEecccCce
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA-RVGEVGGNTL---GFYGCK-FGP-RGDYIIAHGFQGSLHLDVTTWKQ  169 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~---~v~~~~-~~~-~~~~l~~~~~~~~i~~d~~~~~~  169 (312)
                      +.+|..++ -+..|.|.+||..+.....+... +.........   +..-+. |++ +|.+++..+......++  .|+-
T Consensus       275 nsDGkrIv-Fq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~--~~~~  351 (668)
T COG4946         275 NSDGKRIV-FQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMR--PWDG  351 (668)
T ss_pred             CCCCcEEE-EecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEEC--CCCC
Confidence            45565554 34568899999987654332221 1110001111   111111 333 67777777665544332  2443


Q ss_pred             eeeecccCCceeEEEECCCCCEEEEEecCC-eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        170 IQTLPCHQLTITQLAFSPDDTHLVSVSRDR-RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       170 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      -....++.+.|.-..+..+++-++.|..|| .+-++|.++.+......        .-+.|.++..+|+|++++.+....
T Consensus       352 ~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~--------~lg~I~av~vs~dGK~~vvaNdr~  423 (668)
T COG4946         352 YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEK--------DLGNIEAVKVSPDGKKVVVANDRF  423 (668)
T ss_pred             eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeC--------CccceEEEEEcCCCcEEEEEcCce
Confidence            333446788898888888888899999998 89999999766544433        456689999999999999999999


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEEec
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      .|.+.|+.++..             +.+ +...+-|+.++|||+++++|-+=-
T Consensus       424 el~vididngnv-------------~~idkS~~~lItdf~~~~nsr~iAYafP  463 (668)
T COG4946         424 ELWVIDIDNGNV-------------RLIDKSEYGLITDFDWHPNSRWIAYAFP  463 (668)
T ss_pred             EEEEEEecCCCe-------------eEecccccceeEEEEEcCCceeEEEecC
Confidence            999999999842             222 234567999999999999998843

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.03  E-value=7e-07  Score=74.70  Aligned_cols=184  Identities=13%  Similarity=0.009  Sum_probs=108.8

Q ss_pred             cEEEEEEecCcCcCCCCce-EEEecC---CCcEEEeeecCCccccc-------ccccCCCCCceEEE-EeCC--CcEEEE
Q psy15191         49 KVMAVKWVLNTSLDPEHKD-LVSCSL---DKTAILWKYVSEGNYLP-------YHMRDDSKQLHLLS-CSMD--KSIIVW  114 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~-l~s~~~---dg~i~vw~~~~~~~~~~-------~~~~~~~~~~~l~~-~~~d--~~i~i~  114 (312)
                      .+....|+|+      |+. ++..+.   +..|.++|+.+++...+       ....++|++..++. .+.+  ..|.++
T Consensus       189 ~~~~p~wSpD------G~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~  262 (419)
T PRK04043        189 LNIFPKWANK------EQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLY  262 (419)
T ss_pred             CeEeEEECCC------CCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEE
Confidence            7788999998      764 554333   35688889888765322       12345778766554 3334  457777


Q ss_pred             cCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC--eEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        115 APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       115 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      |+.+++...+.        ..........|+|||+.|+..+. .+  .|.+ |+.+.+..+.... ..  ....|+|||+
T Consensus       263 dl~~g~~~~LT--------~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~SPDG~  331 (419)
T PRK04043        263 DTNTKTLTQIT--------NYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVSTYKN  331 (419)
T ss_pred             ECCCCcEEEcc--------cCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC--cCceECCCCC
Confidence            87664322111        11112234579999998776654 33  3444 7776665433321 11  1248999999


Q ss_pred             EEEEEecC---------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC---eEEEEecCCC
Q psy15191        191 HLVSVSRD---------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG---VCVVWGLGEP  258 (312)
Q Consensus       191 ~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~  258 (312)
                      +++..+..         ..|.+.|+.++.... +...        .......|+|||+.|+....++   .+.+.++...
T Consensus       332 ~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~-LT~~--------~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~  402 (419)
T PRK04043        332 YIVYSSRETNNEFGKNTFNLYLISTNSDYIRR-LTAN--------GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN  402 (419)
T ss_pred             EEEEEEcCCCcccCCCCcEEEEEECCCCCeEE-CCCC--------CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence            98877654         267888887665433 3221        1122478999999887665432   3556666443

>KOG4190|consensus

Probab=99.01  E-value=1.3e-09  Score=88.98  Aligned_cols=200  Identities=17%  Similarity=0.154  Sum_probs=127.1

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-ccccccc--------------CCCCCceEEE
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-YLPYHMR--------------DDSKQLHLLS  104 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-~~~~~~~--------------~~~~~~~l~~  104 (312)
                      +..+.||+..|..++-..+      .+-+++++.|++|++|.++.... .....+.              +-.+  .-..
T Consensus       728 L~nf~GH~~~iRai~AidN------ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~--lr~i  799 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDN------ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD--LRSI  799 (1034)
T ss_pred             eecccCcHHHhHHHHhccc------ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec--ccee
Confidence            4568899999998876655      67899999999999999876432 1100000              0111  1134


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE-ecccCceeeeec-----ccC
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL-DVTTWKQIQTLP-----CHQ  177 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~~~~~~~~~~-----~~~  177 (312)
                      ++.||.|++||.--++..  ....-....+....|.++. +-+...++++ +...++++ |.+.......++     +.+
T Consensus       800 ~ScD~giHlWDPFigr~L--aq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pn  876 (1034)
T KOG4190|consen  800 ASCDGGIHLWDPFIGRLL--AQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPN  876 (1034)
T ss_pred             eeccCcceeecccccchh--HhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCCc
Confidence            567899999997653321  1111111112222333322 1134444444 67888998 777665554443     455


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE-EecC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV-WGLG  256 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i-wd~~  256 (312)
                      ..+.+++..+.|+.++++-.+|.|.+.|.++++.+.....       .+.....++ .|..+.|+....|..+.+ |...
T Consensus       877 a~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrp-------mecdllqla-apsdq~L~~saldHslaVnWhal  948 (1034)
T KOG4190|consen  877 ALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRP-------MECDLLQLA-APSDQALAQSALDHSLAVNWHAL  948 (1034)
T ss_pred             hheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCc-------ccchhhhhc-CchhHHHHhhcccceeEeeehhc
Confidence            7789999999999999999999999999999887765553       222222222 356677887778888888 8654


Q ss_pred             CC
Q psy15191        257 EP  258 (312)
Q Consensus       257 ~~  258 (312)
                      .+
T Consensus       949 dg  950 (1034)
T KOG4190|consen  949 DG  950 (1034)
T ss_pred             CC
Confidence            44

>KOG0882|consensus

Probab=99.01  E-value=8.3e-09  Score=82.17  Aligned_cols=206  Identities=12%  Similarity=0.066  Sum_probs=143.7

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC-CCcEEEeeecCCcccccccccC--------CCCC----ceEEE
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNYLPYHMRD--------DSKQ----LHLLS  104 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~~~--------~~~~----~~l~~  104 (312)
                      +.+..+..|...|.+++.+-+      +.++.|.+. |..++++|+++-......-..+        ...+    ...++
T Consensus        44 EfVKhFraHL~~I~sl~~S~d------g~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs  117 (558)
T KOG0882|consen   44 EFVKHFRAHLGVILSLAVSYD------GWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVS  117 (558)
T ss_pred             eehhhhHHHHHHHHhhhcccc------ceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEee
Confidence            345566778888888888777      889999777 9999999998866532211111        1122    23444


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----------
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----------  174 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----------  174 (312)
                      ...++.+.++|-....+......     .-|..+|..+.+++.+..+++....|.|..    |.....++          
T Consensus       118 ~~~sg~i~VvD~~~d~~q~~~fk-----klH~sPV~~i~y~qa~Ds~vSiD~~gmVEy----Ws~e~~~qfPr~~l~~~~  188 (558)
T KOG0882|consen  118 LFKSGKIFVVDGFGDFCQDGYFK-----KLHFSPVKKIRYNQAGDSAVSIDISGMVEY----WSAEGPFQFPRTNLNFEL  188 (558)
T ss_pred             cccCCCcEEECCcCCcCccceec-----ccccCceEEEEeeccccceeeccccceeEe----ecCCCcccCccccccccc
Confidence            55678999999775432222221     257889999999999999999998999988    55442111          


Q ss_pred             ----------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC----------------------
Q psy15191        175 ----------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN----------------------  222 (312)
Q Consensus       175 ----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~----------------------  222 (312)
                                .......++.|+|++..+.+-+.|..|+++++.+++..+.+.......                      
T Consensus       189 K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmave  268 (558)
T KOG0882|consen  189 KHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVE  268 (558)
T ss_pred             cccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHH
Confidence                      334567899999999999999999999999999876555443221110                      


Q ss_pred             ---cc-cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        223 ---GV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       223 ---~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                         .. ....-+.+.|...|++|+.++-=| |++.++.++.
T Consensus       269 relek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~  308 (558)
T KOG0882|consen  269 RELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNT  308 (558)
T ss_pred             hhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCe
Confidence               00 122344677888999999998877 8888887764

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.99  E-value=1.9e-09  Score=57.62  Aligned_cols=39  Identities=31%  Similarity=0.422  Sum_probs=36.6

Q ss_pred             CceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEE
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd  205 (312)
                      |++...+.+|...|++|+|+|++.+|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467788899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG4532|consensus

Probab=98.99  E-value=6e-07  Score=67.18  Aligned_cols=186  Identities=12%  Similarity=0.033  Sum_probs=132.5

Q ss_pred             eEEEecCCCcEEEeeecCCcc--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         67 DLVSCSLDKTAILWKYVSEGN--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      .+..++.|.++++.+++.+..        +....++.++++..+++.+....|..|.+.......+. ...   ......
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~-~~~---a~t~D~  205 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIEN-IYE---APTSDH  205 (344)
T ss_pred             ceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeee-eEe---cccCCC
Confidence            466778899999988876543        23445566888889999999999999999875443333 221   223344


Q ss_pred             eeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-----ecccCCceeEEEECCCCC--EEEEEecCCeEEEEEccCCC
Q psy15191        139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-----LPCHQLTITQLAFSPDDT--HLVSVSRDRRWGLYKRQSSG  210 (312)
Q Consensus       139 v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-----~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~wd~~~~~  210 (312)
                      -.+..|+.....+|++..||.+.+ |++.......     ...|++.+..+.|++-|.  +|+..-.-+.+.+-|+++..
T Consensus       206 gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~  285 (344)
T KOG4532|consen  206 GFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV  285 (344)
T ss_pred             ceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence            467889999999999999999999 6555433222     226899999999998553  44444456789999999999


Q ss_pred             eEEEEeccCCCCccccee-eEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        211 RLSLVACSDKTNGVHKRI-IWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ..+.+..+......|... |..-.|+.++.-+.+.+++. +.=|++..
T Consensus       286 ~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~s  332 (344)
T KOG4532|consen  286 NHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILS  332 (344)
T ss_pred             eeeEEecCccccccccccccccccccCCCcccccccchh-hheeeccc
Confidence            888888777766555544 88888888877666666553 44454433

>KOG4714|consensus

Probab=98.93  E-value=5.8e-08  Score=72.06  Aligned_cols=146  Identities=18%  Similarity=0.187  Sum_probs=88.3

Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecccCc--eeeeec
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVTTWK--QIQTLP  174 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~--~~~~~~  174 (312)
                      +..++++..||.+.+++.+.. .....+++.    .+.. -.+.+.-..++.+.++ .-|.++.  ....|+  ....+.
T Consensus       101 ~t~V~~~~~dg~~~v~s~~~~-~~~~~~i~~----~~~~-~as~~~~~~~~~i~s~-~~g~~n~~d~~~a~~~~p~~t~~  173 (319)
T KOG4714|consen  101 DNRVCIGYADGSLAVFSTDKD-LALMSRIPS----IHSG-SASRKICRHGNSILSG-GCGNWNAQDNFYANTLDPIKTLI  173 (319)
T ss_pred             CCceEecCCCceEEEEechHH-Hhhhhhccc----cccc-ccccceeecccEEecC-CcceEeeccceeeeccccccccc
Confidence            346899999999999987751 111111110    1111 1122233344444433 3333433  111122  222222


Q ss_pred             ---ccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCe
Q psy15191        175 ---CHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGV  249 (312)
Q Consensus       175 ---~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~  249 (312)
                         .....|.+++-+|. ...+++|+.||.+-+||.+.......+.      ..|+.+++.+-|+| ++..|+++++||.
T Consensus       174 ~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l------~ahk~~i~eV~FHpk~p~~Lft~sedGs  247 (319)
T KOG4714|consen  174 PSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLL------KAHKAEIWEVHFHPKNPEHLFTCSEDGS  247 (319)
T ss_pred             ccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHH------HHhhhhhhheeccCCCchheeEecCCCc
Confidence               22334889999994 4567778899999999999763322221      12899999999998 5678999999999


Q ss_pred             EEEEecCC
Q psy15191        250 CVVWGLGE  257 (312)
Q Consensus       250 i~iwd~~~  257 (312)
                      +..||..+
T Consensus       248 lw~wdas~  255 (319)
T KOG4714|consen  248 LWHWDAST  255 (319)
T ss_pred             EEEEcCCC
Confidence            99999874

>KOG4714|consensus

Probab=98.90  E-value=6.6e-08  Score=71.77  Aligned_cols=136  Identities=13%  Similarity=0.064  Sum_probs=84.3

Q ss_pred             CceEEEecCCCcEEEeeecCCcccc--ccc-------ccCCCCCceEEEEeCC------CcEEEEcCCCCcceeeeeeee
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYL--PYH-------MRDDSKQLHLLSCSMD------KSIIVWAPDPTTGLWLETARV  129 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~--~~~-------~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~  129 (312)
                      ++.++++..||.+.+.+.+......  +..       ...-..+. ++....-      +..++|+++..+..     ..
T Consensus       101 ~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~-~i~s~~~g~~n~~d~~~a~~~~p~~t~-----~~  174 (319)
T KOG4714|consen  101 DNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGN-SILSGGCGNWNAQDNFYANTLDPIKTL-----IP  174 (319)
T ss_pred             CCceEecCCCceEEEEechHHHhhhhhcccccccccccceeeccc-EEecCCcceEeeccceeeecccccccc-----cc
Confidence            5679999999999999887632210  000       00001111 2222222      33445555432211     11


Q ss_pred             cccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCcee-eeecccCCceeEEEECC-CCCEEEEEecCCeEEEEE
Q psy15191        130 GEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQI-QTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       130 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd  205 (312)
                      ..  .....|.+++-+|.. +.+++|+.+|.+-+ |.+..... ..+..|+.++..+.|+| ++..|+++++||.+..||
T Consensus       175 ~~--~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wd  252 (319)
T KOG4714|consen  175 SK--KALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWD  252 (319)
T ss_pred             cc--cccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEc
Confidence            11  112338889999955 55667888999999 44433222 22448999999999999 788999999999999999


Q ss_pred             ccC
Q psy15191        206 RQS  208 (312)
Q Consensus       206 ~~~  208 (312)
                      ..+
T Consensus       253 as~  255 (319)
T KOG4714|consen  253 AST  255 (319)
T ss_pred             CCC
Confidence            874

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.88  E-value=7.7e-06  Score=63.83  Aligned_cols=221  Identities=19%  Similarity=0.199  Sum_probs=132.3

Q ss_pred             EEEEEecCcCcCCCCceEEEecCCCc-EEEeeecCCcccccccc----------cCCCCCceEEEEeC-----CCcEEEE
Q psy15191         51 MAVKWVLNTSLDPEHKDLVSCSLDKT-AILWKYVSEGNYLPYHM----------RDDSKQLHLLSCSM-----DKSIIVW  114 (312)
Q Consensus        51 ~~~~~~~~~~~~~~~~~l~s~~~dg~-i~vw~~~~~~~~~~~~~----------~~~~~~~~l~~~~~-----d~~i~i~  114 (312)
                      ..++.+|.     ....++.+-.-|+ ..+||..+++.......          .+++++.+|++.-.     .|.|-||
T Consensus         8 H~~a~~p~-----~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVy   82 (305)
T PF07433_consen    8 HGVAAHPT-----RPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVY   82 (305)
T ss_pred             cceeeCCC-----CCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEE
Confidence            34555553     1445666666554 55777777765322221          23677778877643     4789999


Q ss_pred             cCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-------cCCeEEE------------ecccCceeeeec-
Q psy15191        115 APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-------FQGSLHL------------DVTTWKQIQTLP-  174 (312)
Q Consensus       115 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~~~i~~------------d~~~~~~~~~~~-  174 (312)
                      |.... ..     ++.++..+.-....+.+.|||+.|+++.       ..|..++            |..+++++.... 
T Consensus        83 d~~~~-~~-----ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~L  156 (305)
T PF07433_consen   83 DAARG-YR-----RIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVEL  156 (305)
T ss_pred             ECcCC-cE-----EEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeec
Confidence            99831 22     2233345555667789999998877653       1233333            455666555522 


Q ss_pred             ---ccCCceeEEEECCCCCEEEEEecCCe-------EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        175 ---CHQLTITQLAFSPDDTHLVSVSRDRR-------WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       175 ---~~~~~v~~~~~~~~~~~l~~~~~d~~-------i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                         -|...|..+++.++|..++..-..|.       +-+++.  .+.+..+..+..........+-+|++++++.+++..
T Consensus       157 p~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~t  234 (305)
T PF07433_consen  157 PPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVT  234 (305)
T ss_pred             CccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEE
Confidence               37778999999999976665543332       333333  333444444333222256778999999999877555


Q ss_pred             c-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        245 S-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       245 ~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      + ..|.+.+||..++.            .+....  -..+..++-.+++ ++++.+
T Consensus       235 sPrGg~~~~~d~~tg~------------~~~~~~--l~D~cGva~~~~~-f~~ssG  275 (305)
T PF07433_consen  235 SPRGGRVAVWDAATGR------------LLGSVP--LPDACGVAPTDDG-FLVSSG  275 (305)
T ss_pred             CCCCCEEEEEECCCCC------------Eeeccc--cCceeeeeecCCc-eEEeCC
Confidence            4 67799999998873            222221  2235566666666 555553

>KOG2695|consensus

Probab=98.87  E-value=1.5e-08  Score=78.05  Aligned_cols=142  Identities=11%  Similarity=0.190  Sum_probs=103.2

Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc-----eeeeeccc
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-----QIQTLPCH  176 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-----~~~~~~~~  176 (312)
                      ++.+.+..+-+-|++++-....         ...+.|.++.|...++.+..|..+|.|.. |++...     ....+ -|
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf---------~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh  297 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSF---------QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YH  297 (425)
T ss_pred             ecccccceeEEEEeeccccccc---------ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-Ec
Confidence            5556666677777776433221         24456888999999999999999999988 777542     22233 48


Q ss_pred             CCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCe---EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191        177 QLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGR---LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV  252 (312)
Q Consensus       177 ~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  252 (312)
                      ...|+++.... ++++|++.+.+|.|++||.+..+.   +..+.++...     ..-.-+...+....+++++.|...+|
T Consensus       298 ~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~-----~a~l~~~v~~eeg~I~s~GdDcytRi  372 (425)
T KOG2695|consen  298 DSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNL-----SAYLPAHVKEEEGSIFSVGDDCYTRI  372 (425)
T ss_pred             CcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccc-----ccccccccccccceEEEccCeeEEEE
Confidence            88999988776 788999999999999999997666   5555553211     11112344567778999999999999


Q ss_pred             EecCCCC
Q psy15191        253 WGLGEPP  259 (312)
Q Consensus       253 wd~~~~~  259 (312)
                      |.+..+.
T Consensus       373 Wsl~~gh  379 (425)
T KOG2695|consen  373 WSLDSGH  379 (425)
T ss_pred             EecccCc
Confidence            9998874

>KOG0309|consensus

Probab=98.85  E-value=2.7e-08  Score=84.16  Aligned_cols=238  Identities=15%  Similarity=0.225  Sum_probs=145.9

Q ss_pred             cEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEEE
Q psy15191         49 KVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      .|-.+.|+|.    +-.. .+++.+ ...-.+|++.....              ..+.+.+.+|+  .+++++.|-.+..
T Consensus        69 ~vad~qws~h----~a~~~wiVsts-~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pd--Vlatcsvdt~vh~  141 (1081)
T KOG0309|consen   69 QVADVQWSPH----PAKPYWIVSTS-NQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPD--VLATCSVDTYVHA  141 (1081)
T ss_pred             hhcceecccC----CCCceeEEecC-cchhhhhhhhcCCccceEEEEecCccceeccccCCCCCc--ceeecccccccee
Confidence            3556677776    2222 334333 34455677654332              23444444444  8999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc-CceeeeecccCCceeEEEECC-CCC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQTLPCHQLTITQLAFSP-DDT  190 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~~~~~~~~~v~~~~~~~-~~~  190 (312)
                      ||++......      .....-......++|+.....+++.+....+.+ |.+. ..++..+++|...|+.++|+. ...
T Consensus       142 wd~rSp~~p~------ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s  215 (1081)
T KOG0309|consen  142 WDMRSPHRPF------YSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYS  215 (1081)
T ss_pred             eeccCCCcce------eeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhh
Confidence            9999754221      111223344567899886666666677777888 3332 344556678888899999876 345


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc--eEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR--YFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      .+.+++.|++|++||.............      ...+|..-.+-|=|.  ++.---.++.+.+++-+........  ..
T Consensus       216 ~~~s~~~d~tvkfw~y~kSt~e~~~~vt------t~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~--~~  287 (1081)
T KOG0309|consen  216 EIMSSSNDGTVKFWDYSKSTTESKRTVT------TNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNV--FD  287 (1081)
T ss_pred             hhcccCCCCceeeecccccccccceecc------ccCcceeccccccCceeEeccccCCeeeeeccccchhhhhcc--cc
Confidence            6889999999999998765433222221      455677777777554  2222222335555555443222110  11


Q ss_pred             ccceeEEeeccCcceeEEEeccCC----------CeEEEEecCCCcccceEEeC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDG----------TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .-+++..+.||...|..+-|-..+          -.|+|=|.|..     +++|
T Consensus       288 ~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~-----lrlW  336 (1081)
T KOG0309|consen  288 LNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQT-----LRLW  336 (1081)
T ss_pred             CCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCc-----eEee
Confidence            123789999999998877774322          37899966655     9999

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.85  E-value=3.4e-05  Score=70.82  Aligned_cols=232  Identities=12%  Similarity=0.093  Sum_probs=143.0

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEe----eecCCcc-------cccccccCCCCCceEEEEeCCCcEEEE
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILW----KYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVW  114 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw----~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~  114 (312)
                      ..+.|.++.|.++      ...++.+..+|.|.+.    +......       ..+....++|++..++..+.++++.+.
T Consensus        74 ~~~~ivs~~yl~d------~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~m  147 (928)
T PF04762_consen   74 PNDKIVSFQYLAD------SESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLM  147 (928)
T ss_pred             CCCcEEEEEeccC------CCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEE
Confidence            3467999999988      6678888888999998    5444433       367778889999999999999998876


Q ss_pred             cCCCC-------------cceee--------eee------------ee--------cccCCCccceeEEEECCCCCeEEE
Q psy15191        115 APDPT-------------TGLWL--------ETA------------RV--------GEVGGNTLGFYGCKFGPRGDYIIA  153 (312)
Q Consensus       115 d~~~~-------------~~~~~--------~~~------------~~--------~~~~~~~~~v~~~~~~~~~~~l~~  153 (312)
                      .-.-.             ....+        -++            ..        ..+. ....-..++|-.||+++++
T Consensus       148 t~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAV  226 (928)
T PF04762_consen  148 TRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAV  226 (928)
T ss_pred             eccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEE
Confidence            42200             00000        000            00        0011 2224457899999999998


Q ss_pred             eec---C---CeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEec---CCeEEEEEccCCCeEEEEeccCCCCcc
Q psy15191        154 HGF---Q---GSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR---DRRWGLYKRQSSGRLSLVACSDKTNGV  224 (312)
Q Consensus       154 ~~~---~---~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~  224 (312)
                      .+.   .   ..+++-.+.+.+....+.-.+--..++|-|.|+++++.-.   ...|.+|.-+ +-+...+......   
T Consensus       227 ss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~~~---  302 (928)
T PF04762_consen  227 SSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRFDP---  302 (928)
T ss_pred             EEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCCCC---
Confidence            764   3   3566722223333332223333457899999999988754   3457777654 3333333332211   


Q ss_pred             cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCC-CeEEEEe
Q psy15191        225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDG-TLLASAC  299 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~-~~l~s~s  299 (312)
                      ....|..+.|++++..||..-.|. |.+|-..+.          .|-.-+.+.-. ...+..+.|+|.. ..|...+
T Consensus       303 ~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY----------HWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t  368 (928)
T PF04762_consen  303 EEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY----------HWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLT  368 (928)
T ss_pred             CCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC----------EEEEEEEEEccCCCCCCceEECCCCCCEEEEEe
Confidence            456789999999999999987666 999976554          23333334322 2334558888854 3344443

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.82  E-value=8.4e-06  Score=63.61  Aligned_cols=177  Identities=17%  Similarity=0.040  Sum_probs=107.4

Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC-CCCCeEEEeecCCeEEEecccCceeeeecc-
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG-PRGDYIIAHGFQGSLHLDVTTWKQIQTLPC-  175 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~-  175 (312)
                      ++.++++--..+.|..|+..+.+...   ..   .    .....+++. ++ ..++++...+...+|..+.+....... 
T Consensus        11 ~g~l~~~D~~~~~i~~~~~~~~~~~~---~~---~----~~~~G~~~~~~~-g~l~v~~~~~~~~~d~~~g~~~~~~~~~   79 (246)
T PF08450_consen   11 DGRLYWVDIPGGRIYRVDPDTGEVEV---ID---L----PGPNGMAFDRPD-GRLYVADSGGIAVVDPDTGKVTVLADLP   79 (246)
T ss_dssp             TTEEEEEETTTTEEEEEETTTTEEEE---EE---S----SSEEEEEEECTT-SEEEEEETTCEEEEETTTTEEEEEEEEE
T ss_pred             CCEEEEEEcCCCEEEEEECCCCeEEE---Ee---c----CCCceEEEEccC-CEEEEEEcCceEEEecCCCcEEEEeecc
Confidence            44466666678889999988744221   11   1    116677887 55 556666666666667777655444332 


Q ss_pred             ----cCCceeEEEECCCCCEEEEEecC--------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE-
Q psy15191        176 ----HQLTITQLAFSPDDTHLVSVSRD--------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL-  242 (312)
Q Consensus       176 ----~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-  242 (312)
                          .....+.+++.|+|++.++....        |.|..++.. .+......        .-...+.++|+|+++.|+ 
T Consensus        80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~--------~~~~pNGi~~s~dg~~lyv  150 (246)
T PF08450_consen   80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD--------GLGFPNGIAFSPDGKTLYV  150 (246)
T ss_dssp             TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE--------EESSEEEEEEETTSSEEEE
T ss_pred             CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec--------CcccccceEECCcchheee
Confidence                34678899999999977776543        456666666 33222222        334467899999998765 


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      +-+..+.|..+++.........     .+.+..+....+..-.+++..+|++.++.-
T Consensus       151 ~ds~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~g~pDG~~vD~~G~l~va~~  202 (246)
T PF08450_consen  151 ADSFNGRIWRFDLDADGGELSN-----RRVFIDFPGGPGYPDGLAVDSDGNLWVADW  202 (246)
T ss_dssp             EETTTTEEEEEEEETTTCCEEE-----EEEEEE-SSSSCEEEEEEEBTTS-EEEEEE
T ss_pred             cccccceeEEEeccccccceee-----eeeEEEcCCCCcCCCcceEcCCCCEEEEEc
Confidence            5677889999998754321100     001222222233467899999998877764

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.81  E-value=6.1e-06  Score=68.80  Aligned_cols=204  Identities=14%  Similarity=0.046  Sum_probs=116.9

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccccCCCCCceEE
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLL  103 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~  103 (312)
                      ++|..+|+.+..++-..........  +      +..++.++.++.+..+|..+++..-       +...+. -.+..++
T Consensus        79 a~d~~tG~~~W~~~~~~~~~~~p~v--~------~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~-v~~~~v~  149 (377)
T TIGR03300        79 ALDAETGKRLWRVDLDERLSGGVGA--D------GGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPL-VANGLVV  149 (377)
T ss_pred             EEEccCCcEeeeecCCCCcccceEE--c------CCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCE-EECCEEE
Confidence            3577788888776644321112211  2      4577888889999999998877521       111111 1234677


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc-C---C
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH-Q---L  178 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~-~---~  178 (312)
                      .++.++.|..+|.++++..+.......... .... .+...  .+..++.+..++.+.. |.++++.+-..... .   .
T Consensus       150 v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~-~~~~-~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~  225 (377)
T TIGR03300       150 VRTNDGRLTALDAATGERLWTYSRVTPALT-LRGS-ASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRT  225 (377)
T ss_pred             EECCCCeEEEEEcCCCceeeEEccCCCcee-ecCC-CCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCC
Confidence            788899999999998765554332211000 0000 01111  1235677777777766 87777655432210 0   0


Q ss_pred             ---ceeEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        179 ---TITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       179 ---~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                         .+..+.-+|  .+..++.++.+|.++.+|..+++..-.....        . .....  ..+..++.++.||.|+.+
T Consensus       226 ~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--------~-~~~p~--~~~~~vyv~~~~G~l~~~  294 (377)
T TIGR03300       226 ELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--------S-YQGPA--VDDNRLYVTDADGVVVAL  294 (377)
T ss_pred             chhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC--------C-ccCce--EeCCEEEEECCCCeEEEE
Confidence               000111112  3557888889999999999887765443311        0 11122  245677778899999999


Q ss_pred             ecCCC
Q psy15191        254 GLGEP  258 (312)
Q Consensus       254 d~~~~  258 (312)
                      |..++
T Consensus       295 d~~tG  299 (377)
T TIGR03300       295 DRRSG  299 (377)
T ss_pred             ECCCC
Confidence            99877

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=98.81  E-value=3e-07  Score=77.85  Aligned_cols=156  Identities=10%  Similarity=0.070  Sum_probs=108.4

Q ss_pred             ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeee--------eecccCCCccceeEEEECCCCCeEEEeecCCeE
Q psy15191         89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA--------RVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL  160 (312)
Q Consensus        89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i  160 (312)
                      ...+..+.....+++.|+.||.+++..+.+.........        ....+.+|...|.-+.|+.+.+.|-+...+|.|
T Consensus        16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlI   95 (1189)
T KOG2041|consen   16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLI   95 (1189)
T ss_pred             eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceE
Confidence            344555666777999999999999998876543221111        123457899999999999999999999999999


Q ss_pred             EEecccCceeeee-------cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191        161 HLDVTTWKQIQTL-------PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA  233 (312)
Q Consensus       161 ~~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~  233 (312)
                      .+    |-+.+..       ....+.|.+|+|+.||..++..-.||.|.+=.+...+.... ..       .......+.
T Consensus        96 iV----WmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgK-eL-------kg~~l~hv~  163 (1189)
T KOG2041|consen   96 IV----WMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGK-EL-------KGQLLAHVL  163 (1189)
T ss_pred             EE----EeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecch-hc-------chhecccee
Confidence            99    6544331       14567899999999999999999999888776664322110 00       111233566


Q ss_pred             EcCCCceEEEeccCCeEEEEecC
Q psy15191        234 WSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       234 ~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      |++|.+.++.+-..|.+.+||-.
T Consensus       164 ws~D~~~~Lf~~ange~hlydnq  186 (1189)
T KOG2041|consen  164 WSEDLEQALFKKANGETHLYDNQ  186 (1189)
T ss_pred             ecccHHHHHhhhcCCcEEEeccc
Confidence            77777666666666777777643

>KOG1912|consensus

Probab=98.80  E-value=2.4e-06  Score=73.17  Aligned_cols=197  Identities=16%  Similarity=0.163  Sum_probs=114.4

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------------------CceEEEEccccCcEEEEEEe
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------------------GKVLYTLTNHKSKVMAVKWV   56 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------------------~~~~~~~~~h~~~v~~~~~~   56 (312)
                      |.+..+-+.+.++.-|+..|+.+.|.+..                               +..+..+..|.+++..++|.
T Consensus        39 VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~  118 (1062)
T KOG1912|consen   39 VVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWV  118 (1062)
T ss_pred             EEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeee
Confidence            55666677777888888888888887643                               22233456688889999998


Q ss_pred             cCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcce--e
Q psy15191         57 LNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL--W  123 (312)
Q Consensus        57 ~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~  123 (312)
                      +.-+-+.  ..|+.-....++.+|+..+|+.+           +..+-++++  ..+..-+..|.+.+-+.-..+..  .
T Consensus       119 ~~rd~Sr--d~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~--rh~~~l~s~g~vl~~~~l~~sep~~p  194 (1062)
T KOG1912|consen  119 PARDDSR--DVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDS--RHFCVLGSKGFVLSCKDLGLSEPDVP  194 (1062)
T ss_pred             eccCcch--heeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCc--ceEEEEccCceEEEEeccCCCCCCCC
Confidence            8722221  35555566679999999998872           222333333  35555566666666543321110  0


Q ss_pred             eeeeeeccc------------C--CCcc---------ceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191        124 LETARVGEV------------G--GNTL---------GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       124 ~~~~~~~~~------------~--~~~~---------~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      .+.+.+...            .  .+..         ....++|+|.-+.++.......+.+ |++-........-..+.
T Consensus       195 gk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~  274 (1062)
T KOG1912|consen  195 GKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGG  274 (1062)
T ss_pred             ceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCC
Confidence            000010000            0  0000         0123567886555554455555555 66655555555545555


Q ss_pred             eeEEEECCCC--CEEEEEecCCeEEEEEccC
Q psy15191        180 ITQLAFSPDD--THLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       180 v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~  208 (312)
                      +.-+.+-|++  ..|++...||.+.+|-.+.
T Consensus       275 akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  275 AKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             cceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence            6666776654  4688889999999986654

>KOG1920|consensus

Probab=98.80  E-value=5.2e-07  Score=80.66  Aligned_cols=190  Identities=15%  Similarity=0.198  Sum_probs=121.3

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec-
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP-  174 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~-  174 (312)
                      ..+...++.+...|.|.+-|..+......        ..-...|.+++|+||++.++..+..+++.+...+|+++.... 
T Consensus        77 l~d~~~i~v~~~~G~iilvd~et~~~eiv--------g~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L  148 (1265)
T KOG1920|consen   77 LADTNSICVITALGDIILVDPETLELEIV--------GNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPL  148 (1265)
T ss_pred             ecccceEEEEecCCcEEEEcccccceeee--------eeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcccc
Confidence            33444678888889888888776432222        123467999999999999999999888888555554433211 


Q ss_pred             -----------------------c---------------------cCCceeEEEECCCCCEEEEEe----cC-CeEEEEE
Q psy15191        175 -----------------------C---------------------HQLTITQLAFSPDDTHLVSVS----RD-RRWGLYK  205 (312)
Q Consensus       175 -----------------------~---------------------~~~~v~~~~~~~~~~~l~~~~----~d-~~i~~wd  205 (312)
                                             +                     -.+.=+++.|--||.++++..    .+ +.|++||
T Consensus       149 ~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~d  228 (1265)
T KOG1920|consen  149 DADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYD  228 (1265)
T ss_pred             ccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEec
Confidence                                   0                     011123589999999998843    23 7899999


Q ss_pred             ccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec---cCCeEEEEecCCCCCCcccccccccceeEEeeccCcc
Q psy15191        206 RQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE  282 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (312)
                      ..  ..+.....+      ....-.+++|-|.|..+++-.   .|+.|.+|.-+.-....         ..-.+......
T Consensus       229 rE--g~Lns~se~------~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~---------f~l~~p~de~~  291 (1265)
T KOG1920|consen  229 RE--GALNSTSEP------VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGE---------FVLPFPLDEKE  291 (1265)
T ss_pred             cc--chhhcccCc------ccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccc---------cccCCcccccc
Confidence            87  222222221      222334799999999998763   45678888654332111         11122233445


Q ss_pred             eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        283 IYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       283 v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |..++|+.++..||.--.+  .+...|++|
T Consensus       292 ve~L~Wns~sdiLAv~~~~--~e~~~v~lw  319 (1265)
T KOG1920|consen  292 VEELAWNSNSDILAVVTSN--LENSLVQLW  319 (1265)
T ss_pred             hheeeecCCCCceeeeecc--cccceEEEE
Confidence            8999999999999983332  334448888

>KOG0309|consensus

Probab=98.79  E-value=3.3e-08  Score=83.65  Aligned_cols=199  Identities=14%  Similarity=0.279  Sum_probs=129.0

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCceEEEEeC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~~l~~~~~  107 (312)
                      ...-..+.+|...|+.+.|.|.   .  ...+++++.|-.+..||++.....-         .....++-....+++.+.
T Consensus       104 ~aIef~lhghsraitd~n~~~q---~--pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlassh  178 (1081)
T KOG0309|consen  104 NAIEFVLHGHSRAITDINFNPQ---H--PDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSH  178 (1081)
T ss_pred             cceEEEEecCccceeccccCCC---C--CcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhcc
Confidence            4455677899999999999997   3  3489999999999999998876521         111222222235677778


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEEecccCceeeeec------ccCCce
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHLDVTTWKQIQTLP------CHQLTI  180 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~d~~~~~~~~~~~------~~~~~v  180 (312)
                      .+.|.+||.+.+...      +...++|...++.+.|+. ....+.+++.|+++++    |+..+...      ....+|
T Consensus       179 g~~i~vwd~r~gs~p------l~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkf----w~y~kSt~e~~~~vtt~~pi  248 (1081)
T KOG0309|consen  179 GNDIFVWDLRKGSTP------LCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKF----WDYSKSTTESKRTVTTNFPI  248 (1081)
T ss_pred             CCceEEEeccCCCcc------eEEecccceeeehHHHhhhhhhhhcccCCCCceee----ecccccccccceeccccCcc
Confidence            888999999875422      222235777888888876 3456888899999999    65544322      234566


Q ss_pred             eEEEECCCCC--EEEEEecCCeEEEEEccC----------CCeEEEEeccCCCCcccceeeEEEEEcCCC----------
Q psy15191        181 TQLAFSPDDT--HLVSVSRDRRWGLYKRQS----------SGRLSLVACSDKTNGVHKRIIWGVAWSHDS----------  238 (312)
Q Consensus       181 ~~~~~~~~~~--~l~~~~~d~~i~~wd~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------  238 (312)
                      ..-.+.|-|.  ++.-.-.+..+.+++-++          .+++..+.+       |...|....|-..+          
T Consensus       249 w~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~G-------H~D~V~eFlWR~r~e~~~d~d~rd  321 (1081)
T KOG0309|consen  249 WRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVG-------HDDVVLEFLWRKRKECDGDYDSRD  321 (1081)
T ss_pred             eeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecC-------cchHHHHHhhhhcccccCCCCccc
Confidence            6667777443  222222223444444333          234444444       66656555554322          


Q ss_pred             ceEEEeccCCeEEEEecCC
Q psy15191        239 RYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~  257 (312)
                      -.|++=+.|..+++|-+..
T Consensus       322 fQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  322 FQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             eeEEEeecCCceEeeeccH
Confidence            2689999999999998754

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.78  E-value=1.8e-05  Score=61.43  Aligned_cols=207  Identities=16%  Similarity=0.050  Sum_probs=123.2

Q ss_pred             EEEeCCCCceEEEEccc--cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc------ccCCCCCce
Q psy15191         30 VKWNGEGGKVLYTLTNH--KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH------MRDDSKQLH  101 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~------~~~~~~~~~  101 (312)
                      .+||+.+|+.+.+..--  .....+. ..++      +..+++++.++.+..||..+++..-...      ......+..
T Consensus         6 ~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~------~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~   78 (238)
T PF13360_consen    6 SALDPRTGKELWSYDLGPGIGGPVAT-AVPD------GGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGR   78 (238)
T ss_dssp             EEEETTTTEEEEEEECSSSCSSEEET-EEEE------TTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTE
T ss_pred             EEEECCCCCEEEEEECCCCCCCccce-EEEe------CCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccc
Confidence            34788888888887531  1122211 2222      5677777889999999998887621111      111223446


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc-
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT-  179 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~-  179 (312)
                      ++.++.++.+..+|..+++..+........  ... ..........+..++++..++.+.. |+++++.+-........ 
T Consensus        79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~  155 (238)
T PF13360_consen   79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSP--PAG-VRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRG  155 (238)
T ss_dssp             EEEEETTSEEEEEETTTSCEEEEEEE-SSC--TCS-TB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-S
T ss_pred             cccccceeeeEecccCCcceeeeecccccc--ccc-cccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCC
Confidence            777778889999999987766552211101  111 1112222233778888887888887 99999887766533211 


Q ss_pred             ---------e-eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe
Q psy15191        180 ---------I-TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV  249 (312)
Q Consensus       180 ---------v-~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~  249 (312)
                               + ..+.+. ++ .++.++.++.+..+|+.+++...  ....     ..  +.. ...+++..|+.++.++.
T Consensus       156 ~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~d~~tg~~~w--~~~~-----~~--~~~-~~~~~~~~l~~~~~~~~  223 (238)
T PF13360_consen  156 SSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAVDLATGEKLW--SKPI-----SG--IYS-LPSVDGGTLYVTSSDGR  223 (238)
T ss_dssp             S--EEEETTEEEEEECC-TT-EEEEECCTSSEEEEETTTTEEEE--EECS-----S---ECE-CEECCCTEEEEEETTTE
T ss_pred             CcceeeecccccceEEE-CC-EEEEEcCCCeEEEEECCCCCEEE--EecC-----CC--ccC-CceeeCCEEEEEeCCCE
Confidence                     1 223332 44 67777777754334999887553  2211     11  112 13456777777779999


Q ss_pred             EEEEecCCC
Q psy15191        250 CVVWGLGEP  258 (312)
Q Consensus       250 i~iwd~~~~  258 (312)
                      |..||+.++
T Consensus       224 l~~~d~~tG  232 (238)
T PF13360_consen  224 LYALDLKTG  232 (238)
T ss_dssp             EEEEETTTT
T ss_pred             EEEEECCCC
Confidence            999999988

...

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.74  E-value=3.9e-05  Score=58.38  Aligned_cols=200  Identities=15%  Similarity=0.125  Sum_probs=114.8

Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec------
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP------  174 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~------  174 (312)
                      +++.-.|..|.|-..++.-...+.+..+  .......-..++|+||+..|+.+...|.|++ |+..-.+...-.      
T Consensus        11 ~lAi~qd~~iEiRsa~Ddf~si~~kcqV--pkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~   88 (282)
T PF15492_consen   11 LLAILQDQCIEIRSAKDDFSSIIGKCQV--PKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPG   88 (282)
T ss_pred             EEEEEeccEEEEEeccCCchheeEEEec--CCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCC
Confidence            4444455555554444332222222222  1233344677999999999999999999999 554322221111      


Q ss_pred             ccCCceeEEEECCC------CCEEEEEecCCeEEEEEccC-----CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        175 CHQLTITQLAFSPD------DTHLVSVSRDRRWGLYKRQS-----SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       175 ~~~~~v~~~~~~~~------~~~l~~~~~d~~i~~wd~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      .-...|..|.|.+-      ...|++-..+|.++-|-+..     .+....+.....    ....|+++.++|..++|+.
T Consensus        89 d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~----yp~Gi~~~vy~p~h~LLlV  164 (282)
T PF15492_consen   89 DLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSH----YPHGINSAVYHPKHRLLLV  164 (282)
T ss_pred             ccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEeccc----CCCceeEEEEcCCCCEEEE
Confidence            12356677777542      22566777888887776532     122222222111    4667999999999888776


Q ss_pred             ecc-CC----------eEEEEecCCCCCCccccc------------cccccee----EE-eeccCcceeEEEeccCCCeE
Q psy15191        244 ISR-DG----------VCVVWGLGEPPTEEDLVQ------------NTLWPEV----QK-LYGHGYEIYSLAASHDGTLL  295 (312)
Q Consensus       244 ~~~-dg----------~i~iwd~~~~~~~~~~~~------------~~~~~~~----~~-~~~~~~~v~~~~~s~~~~~l  295 (312)
                      |+. ..          -+..|.+-.+.+-...+.            ...++..    .. .......|..|..||||.+|
T Consensus       165 gG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~L  244 (282)
T PF15492_consen  165 GGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLL  244 (282)
T ss_pred             eccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEE
Confidence            653 11          366777654432211100            0111111    00 11235679999999999999


Q ss_pred             EEEecCCCcccceEEeC
Q psy15191        296 ASACKATKPEHAAIIIW  312 (312)
Q Consensus       296 ~s~s~d~~~~dg~i~iW  312 (312)
                      |+.+.+|.     |.+|
T Consensus       245 a~ih~sG~-----lsLW  256 (282)
T PF15492_consen  245 ACIHFSGS-----LSLW  256 (282)
T ss_pred             EEEEcCCe-----EEEE
Confidence            99966666     9998

>KOG2114|consensus

Probab=98.70  E-value=1.5e-05  Score=69.16  Aligned_cols=187  Identities=13%  Similarity=0.051  Sum_probs=120.0

Q ss_pred             CceEEEecCCCcEEEeeecCCcc-------cc-cccccCCCCCceEEEEeCCC-----cEEEEcCCCCc----ceeeeee
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGN-------YL-PYHMRDDSKQLHLLSCSMDK-----SIIVWAPDPTT----GLWLETA  127 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~-------~~-~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~----~~~~~~~  127 (312)
                      +..++.|+.+|.|.+.+-.-...       .. +.+........+|++.+.|+     .+++|+++..+    +.+....
T Consensus        35 ~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~  114 (933)
T KOG2114|consen   35 TGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEH  114 (933)
T ss_pred             CceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeee
Confidence            77899999999998887543321       11 22222223334677776664     48999987542    2333222


Q ss_pred             eecc--cCCCccceeEEEECCCCCeEEEeecCCeEEE---ecccCc-eeeeec-ccCCceeEEEECCCCCEEEEEecCCe
Q psy15191        128 RVGE--VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWK-QIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRR  200 (312)
Q Consensus       128 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~  200 (312)
                      +...  .+....++.+++.+.+-+.+++|-.+|.|..   |+.--+ .+.... ....+|+.+++..++..++-+..-..
T Consensus       115 ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~  194 (933)
T KOG2114|consen  115 RIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQ  194 (933)
T ss_pred             eeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecce
Confidence            2222  2234678899999999999999999999887   322111 111111 35678999999998887444445667


Q ss_pred             EEEEEccCCCeEEE-EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        201 WGLYKRQSSGRLSL-VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       201 i~~wd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |.+|.+....+... +..       +...++|..+++....+++++.. .|.+|+....+
T Consensus       195 V~~y~l~gr~p~~~~ld~-------~G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~~~  246 (933)
T KOG2114|consen  195 VMLYSLSGRTPSLKVLDN-------NGISLNCSSFSDGTYQFICAGSE-FLYFYDSDGRG  246 (933)
T ss_pred             eEEEEecCCCcceeeecc-------CCccceeeecCCCCccEEEecCc-eEEEEcCCCcc
Confidence            99999885442222 222       77788999999776656665544 59999877553

>KOG1912|consensus

Probab=98.67  E-value=7.2e-06  Score=70.40  Aligned_cols=213  Identities=15%  Similarity=0.179  Sum_probs=142.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCc----CcCCC--CceEEEecCCCcEEEeeecCCcc-----------ccccccc
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNT----SLDPE--HKDLVSCSLDKTAILWKYVSEGN-----------YLPYHMR   94 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~~~~--~~~l~s~~~dg~i~vw~~~~~~~-----------~~~~~~~   94 (312)
                      -|..+-+.+..+.-|+..|+.+.|.|..    .+++.  ..+||++...|.|.+||......           ..+.|.+
T Consensus        40 VDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~  119 (1062)
T KOG1912|consen   40 VDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVP  119 (1062)
T ss_pred             EehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeee
Confidence            3555678889999999999999999862    23322  24578888889999999876543           3455666


Q ss_pred             CCCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE--ecccCc--
Q psy15191         95 DDSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL--DVTTWK--  168 (312)
Q Consensus        95 ~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~--d~~~~~--  168 (312)
                      ..++. ..|++-.....+.+|+..+++..+....       ......|+.+.| |.+.+..-+..|.+.+  ++..-+  
T Consensus       120 ~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~y-------s~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~  192 (1062)
T KOG1912|consen  120 ARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDY-------SHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPD  192 (1062)
T ss_pred             ccCcchheeEEecCCcEEEEEEccCCceeecccc-------CCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCC
Confidence            55555 5777778888999999998765554432       234456788888 6666776667777666  222111  


Q ss_pred             -eeeeec---ccCC-------------------------ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC
Q psy15191        169 -QIQTLP---CHQL-------------------------TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       169 -~~~~~~---~~~~-------------------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                       ..+.++   .|.+                         ....++|+|.-+.++.......+.++|++-...+..+..  
T Consensus       193 ~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpi--  270 (1062)
T KOG1912|consen  193 VPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPI--  270 (1062)
T ss_pred             CCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEe--
Confidence             011111   1111                         012356788666666667788999999998887777765  


Q ss_pred             CCCcccceeeEEEEEcCCC--ceEEEeccCCeEEEEecCCC
Q psy15191        220 KTNGVHKRIIWGVAWSHDS--RYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~  258 (312)
                           ..+.+.-+.+-|++  ..|++.-.||.+.+|-.+..
T Consensus       271 -----er~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~  306 (1062)
T KOG1912|consen  271 -----ERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEE  306 (1062)
T ss_pred             -----ccCCcceeEeccCCCcceEEEEecCCeEEEEEeecc
Confidence                 33334456666655  47889999999999976553

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.66  E-value=3.8e-07  Score=69.69  Aligned_cols=208  Identities=15%  Similarity=0.198  Sum_probs=127.6

Q ss_pred             cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC------------ccceeEEEECCCC--CeEEEee
Q psy15191         90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN------------TLGFYGCKFGPRG--DYIIAHG  155 (312)
Q Consensus        90 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~--~~l~~~~  155 (312)
                      +....+...|.++++|...|.|.+|.-....+ +... ...++++|            ...|..+.|-.++  ..++..+
T Consensus        29 ItaVefd~tg~YlatGDkgGRVvlfer~~s~~-ceyk-f~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlst  106 (460)
T COG5170          29 ITAVEFDETGLYLATGDKGGRVVLFEREKSYG-CEYK-FFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLST  106 (460)
T ss_pred             eeEEEeccccceEeecCCCceEEEeecccccc-cchh-hhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEec
Confidence            34445567778999999999999997654331 1111 11122222            2346677886644  3477778


Q ss_pred             cCCeEEEecccCceeeee------------------------------------------------cccCCceeEEEECC
Q psy15191        156 FQGSLHLDVTTWKQIQTL------------------------------------------------PCHQLTITQLAFSP  187 (312)
Q Consensus       156 ~~~~i~~d~~~~~~~~~~------------------------------------------------~~~~~~v~~~~~~~  187 (312)
                      .|.+|++    |++...-                                                ..|...|+++.++.
T Consensus       107 NdktiKl----WKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~Ns  182 (460)
T COG5170         107 NDKTIKL----WKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNS  182 (460)
T ss_pred             CCceeee----eeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecC
Confidence            8999999    6543220                                                05677788999999


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      |...++++ .|=.|.+|++.-... ...+............-|++..|+|.. ..+...+..|.|++-|++....-... 
T Consensus       183 D~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~-  260 (460)
T COG5170         183 DKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNS-  260 (460)
T ss_pred             chheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCc-
Confidence            88888765 678899999875433 222222222211133457888999964 46667788999999999844211100 


Q ss_pred             cccccc------eeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWP------EVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .++.+      ...-+.+--+.|.++.|+++|+++++-+.      -+|+||
T Consensus       261 -~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy------ltvkiw  306 (460)
T COG5170         261 -KKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY------LTVKIW  306 (460)
T ss_pred             -hhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc------ceEEEE
Confidence             00000      01111223457889999999999988632      347777

>KOG2695|consensus

Probab=98.64  E-value=1.5e-07  Score=72.68  Aligned_cols=140  Identities=14%  Similarity=0.132  Sum_probs=98.3

Q ss_pred             CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-----eEEEEeccCCC
Q psy15191        148 GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-----RLSLVACSDKT  221 (312)
Q Consensus       148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-----~~~~~~~~~~~  221 (312)
                      +-.+.+|. +..+.+ +++++-.. .+. ..+.|..+.|...++.+..|..+|.|..+|++...     +...+.     
T Consensus       225 gyhfs~G~-sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-----  296 (425)
T KOG2695|consen  225 GYHFSVGL-SQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-----  296 (425)
T ss_pred             eeeecccc-cceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-----
Confidence            33433443 444444 66654332 233 56778899999889999999999999999999752     222222     


Q ss_pred             CcccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE--EeccCCCeEEEE
Q psy15191        222 NGVHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL--AASHDGTLLASA  298 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~s~  298 (312)
                         |...|+++..-. ++++|++.+.+|+|.+||.+..+...         -+....||...-.-+  -..+....++++
T Consensus       297 ---h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~---------~V~qYeGHvN~~a~l~~~v~~eeg~I~s~  364 (425)
T KOG2695|consen  297 ---HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKK---------SVMQYEGHVNLSAYLPAHVKEEEGSIFSV  364 (425)
T ss_pred             ---cCcchhhhhhhccccceEeeccCcCceeEeeehhhhccc---------ceeeeecccccccccccccccccceEEEc
Confidence               888899887766 78899999999999999998764322         367777776543333  335666788888


Q ss_pred             ecCCCcccceEEeC
Q psy15191        299 CKATKPEHAAIIIW  312 (312)
Q Consensus       299 s~d~~~~dg~i~iW  312 (312)
                           ++|...|||
T Consensus       365 -----GdDcytRiW  373 (425)
T KOG2695|consen  365 -----GDDCYTRIW  373 (425)
T ss_pred             -----cCeeEEEEE
Confidence                 677889999

>KOG2066|consensus

Probab=98.60  E-value=2.6e-06  Score=73.15  Aligned_cols=136  Identities=15%  Similarity=0.171  Sum_probs=96.4

Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCC
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL  178 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~  178 (312)
                      ..++-|+.+|.|++++.....    .+.     ..|...      ..+|.++++|+.||.+.+ .+-+.+....+. ...
T Consensus        50 ~~~~~GtH~g~v~~~~~~~~~----~~~-----~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~r  113 (846)
T KOG2066|consen   50 KFFALGTHRGAVYLTTCQGNP----KTN-----FDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKR  113 (846)
T ss_pred             ceeeeccccceEEEEecCCcc----ccc-----cccccc------ccCCceEEEecCCCcEEEeeccCCccceeEe-cCC
Confidence            378999999999999876421    111     122221      568999999999999998 555555544443 457


Q ss_pred             ceeEEEECCC-----CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        179 TITQLAFSPD-----DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       179 ~v~~~~~~~~-----~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ++.+++++|+     .+.+++|+.-| +.++.-+-.+.......     ....++|.++.|  .|.++|=++.+| |+||
T Consensus       114 piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l-----~~~eG~I~~i~W--~g~lIAWand~G-v~vy  184 (846)
T KOG2066|consen  114 PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVL-----SEGEGPIHSIKW--RGNLIAWANDDG-VKVY  184 (846)
T ss_pred             cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceee-----ecCccceEEEEe--cCcEEEEecCCC-cEEE
Confidence            8999999997     56899999888 88876442222211111     016788999999  688999999998 9999


Q ss_pred             ecCCCCC
Q psy15191        254 GLGEPPT  260 (312)
Q Consensus       254 d~~~~~~  260 (312)
                      |+.....
T Consensus       185 d~~~~~~  191 (846)
T KOG2066|consen  185 DTPTRQR  191 (846)
T ss_pred             eccccce
Confidence            9987743

>KOG0882|consensus

Probab=98.53  E-value=1.2e-06  Score=70.25  Aligned_cols=197  Identities=12%  Similarity=0.043  Sum_probs=122.8

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEE-ecccCceeeeec--cc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL-DVTTWKQIQTLP--CH  176 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~--~~  176 (312)
                      ++++++.||.++.|--..-.+..    ....+..|...+.+++.+-++..+.+.+. |..+++ |+.+.+....+.  -.
T Consensus        22 fiiqASlDGh~KFWkKs~isGvE----fVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~l   97 (558)
T KOG0882|consen   22 FIIQASLDGHKKFWKKSRISGVE----FVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDL   97 (558)
T ss_pred             eEEeeecchhhhhcCCCCcccee----ehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccC
Confidence            55666666666666433211111    11223357778888999999999999777 999999 888888876554  12


Q ss_pred             CCceeEEEECC-CCC-EEE-EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        177 QLTITQLAFSP-DDT-HLV-SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       177 ~~~v~~~~~~~-~~~-~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      .+.+..+ .+| |-. .++ +.-.++.+.++|-........+....     |..+|..+.++|-+..+++....|.|.-|
T Consensus        98 Pg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkkl-----H~sPV~~i~y~qa~Ds~vSiD~~gmVEyW  171 (558)
T KOG0882|consen   98 PGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKL-----HFSPVKKIRYNQAGDSAVSIDISGMVEYW  171 (558)
T ss_pred             CCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceeccc-----ccCceEEEEeeccccceeeccccceeEee
Confidence            2222222 222 111 233 23457899999987654322222111     88999999999999999999999999999


Q ss_pred             ecCCCCC-Cc--ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPT-EE--DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .....-. ..  .....+.-..+..+........++.|+|+|..+.+-+.     |..|+++
T Consensus       172 s~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~-----DrkVR~F  228 (558)
T KOG0882|consen  172 SAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP-----DRKVRGF  228 (558)
T ss_pred             cCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc-----ccEEEEE
Confidence            8764110 00  00000101123333344567889999999999999954     4448863

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.53  E-value=8.1e-05  Score=62.43  Aligned_cols=209  Identities=10%  Similarity=0.027  Sum_probs=115.1

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-cccc--------ccCCC--CC
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-LPYH--------MRDDS--KQ   99 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-~~~~--------~~~~~--~~   99 (312)
                      ++|.++|+.+.+.+... .+.+--...       +..++.+..++.+.-+|..+++.. ....        ....|  .+
T Consensus       134 ald~~tG~~~W~~~~~~-~~~ssP~v~-------~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~  205 (394)
T PRK11138        134 ALNAEDGEVAWQTKVAG-EALSRPVVS-------DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAF  205 (394)
T ss_pred             EEECCCCCCcccccCCC-ceecCCEEE-------CCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEEC
Confidence            36777888877766432 222110111       235666777888998898888762 1000        00111  12


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeeccc
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      ..++.++.++.+..+|..+++..+..................+..+|  .+..+++++.+|.+.- |..+++.+-.... 
T Consensus       206 ~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~-  284 (394)
T PRK11138        206 GGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREY-  284 (394)
T ss_pred             CEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecC-
Confidence            35677788899999999887665543221100000000011111122  2456666777777766 8877766544331 


Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                       .....+..  .+..++.++.+|.+..+|..+++.+-.......      ....+...  .+.+|+.++.||.|++.|..
T Consensus       285 -~~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~------~~~~sp~v--~~g~l~v~~~~G~l~~ld~~  353 (394)
T PRK11138        285 -GSVNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLH------RLLTAPVL--YNGYLVVGDSEGYLHWINRE  353 (394)
T ss_pred             -CCccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcccccCC------CcccCCEE--ECCEEEEEeCCCEEEEEECC
Confidence             11112222  456788888999999999988765433221100      01111122  24567788999999999988


Q ss_pred             CCC
Q psy15191        257 EPP  259 (312)
Q Consensus       257 ~~~  259 (312)
                      ++.
T Consensus       354 tG~  356 (394)
T PRK11138        354 DGR  356 (394)
T ss_pred             CCC
Confidence            873

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.47  E-value=0.00033  Score=54.94  Aligned_cols=201  Identities=14%  Similarity=0.113  Sum_probs=114.0

Q ss_pred             EEEEEeCCCCceEEEEccccCcEE--EEEEecCcCcCCCCceEEEec-----CCCcEEEeeecCCcc-c--------ccc
Q psy15191         28 MAVKWNGEGGKVLYTLTNHKSKVM--AVKWVLNTSLDPEHKDLVSCS-----LDKTAILWKYVSEGN-Y--------LPY   91 (312)
Q Consensus        28 ~~~~w~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~~~~~~l~s~~-----~dg~i~vw~~~~~~~-~--------~~~   91 (312)
                      +.+.||+.+++....+....+.-.  .-.|+++      |++|++.-     ..|.|-|||...+-. .        ..-
T Consensus        29 ~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~d------G~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPH  102 (305)
T PF07433_consen   29 FALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPD------GRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPH  102 (305)
T ss_pred             EEEEEEcCCCceeeEEcCCCCCEEecCEEEcCC------CCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChh
Confidence            345588888888877665443322  2356666      99998874     358899999983322 1        111


Q ss_pred             cccCCCCCceEEEEe------------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE
Q psy15191         92 HMRDDSKQLHLLSCS------------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA  153 (312)
Q Consensus        92 ~~~~~~~~~~l~~~~------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  153 (312)
                      -+...+++..|+++-                  .+..+...|..+++  .+.+..+ ....|..++..+++.++|..++.
T Consensus       103 el~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~--ll~q~~L-p~~~~~lSiRHLa~~~~G~V~~a  179 (305)
T PF07433_consen  103 ELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGA--LLEQVEL-PPDLHQLSIRHLAVDGDGTVAFA  179 (305)
T ss_pred             hEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCc--eeeeeec-CccccccceeeEEecCCCcEEEE
Confidence            111234443444332                  12233333333322  2222111 11346778999999999887766


Q ss_pred             eecCCeEE-----E-ecccCceeeee-------cccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccC
Q psy15191        154 HGFQGSLH-----L-DVTTWKQIQTL-------PCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       154 ~~~~~~i~-----~-d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                      .-..|.-.     + -.+.......+       ....+.+-+|++++++.++++.+ ..+.+.+||..++..+.....  
T Consensus       180 ~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l--  257 (305)
T PF07433_consen  180 MQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL--  257 (305)
T ss_pred             EecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc--
Confidence            54433311     1 11111111111       13457899999999998776555 568899999998887665443  


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEeccC
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISRD  247 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d  247 (312)
                             ..+..++-.+++ ++++.+..
T Consensus       258 -------~D~cGva~~~~~-f~~ssG~G  277 (305)
T PF07433_consen  258 -------PDACGVAPTDDG-FLVSSGQG  277 (305)
T ss_pred             -------CceeeeeecCCc-eEEeCCCc
Confidence                   235667777666 56655543

>KOG1832|consensus

Probab=98.47  E-value=1.9e-07  Score=80.93  Aligned_cols=189  Identities=14%  Similarity=0.080  Sum_probs=124.6

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d  108 (312)
                      .+..++|..|...-+|++|+..      .+.|+.|+..|.|+++++.+|....        +.....+.++..+++.+.-
T Consensus      1091 Fr~w~~frd~~~~fTc~afs~~------~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~ 1164 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGG------TNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSS 1164 (1516)
T ss_pred             cccchhhhccccceeeEEeecC------CceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccc
Confidence            4667788899999999999988      7899999999999999999987632        2233334455555544432


Q ss_pred             -C-cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec----ccCCcee
Q psy15191        109 -K-SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP----CHQLTIT  181 (312)
Q Consensus       109 -~-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~----~~~~~v~  181 (312)
                       . ...+|++.. ......         .-..-.++.|+.....-+.|.......+ |+.+.....++.    +....-+
T Consensus      1165 S~PlsaLW~~~s-~~~~~H---------sf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n 1234 (1516)
T KOG1832|consen 1165 SSPLSALWDASS-TGGPRH---------SFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNN 1234 (1516)
T ss_pred             cCchHHHhcccc-ccCccc---------cccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhcc
Confidence             2 466888765 111111         1123456788876655555555555666 888777665532    1222236


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ...|+|+..+++   .||  .+||.+..+.+..+.....        --.-.|+|.|..++.-+     .|||+++..
T Consensus      1235 ~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~--------~~~G~FHP~g~eVIINS-----EIwD~RTF~ 1294 (1516)
T KOG1832|consen 1235 LAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFDQFTD--------YGGGGFHPSGNEVIINS-----EIWDMRTFK 1294 (1516)
T ss_pred             ccccCCCcceEe---eCc--eeeeeccHHHHhhhhhhee--------cccccccCCCceEEeec-----hhhhhHHHH
Confidence            788999887665   455  5899998776665553211        11346999999888765     489988753

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.42  E-value=0.0001  Score=63.16  Aligned_cols=146  Identities=16%  Similarity=0.108  Sum_probs=88.1

Q ss_pred             CCCCeEEEeecCCeEEE-eccc-----CceeeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEE-----
Q psy15191        146 PRGDYIIAHGFQGSLHL-DVTT-----WKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLS-----  213 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~-d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~-----  213 (312)
                      ++|++...+  ++.|.+ |.++     +.....+. -......+.++|||+++++++ .+..+.+.|+.+.+...     
T Consensus       286 kdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~  362 (635)
T PRK02888        286 KAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIK  362 (635)
T ss_pred             hCCCEEEEC--CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCC
Confidence            456665552  455666 8887     55555554 455678899999999887765 58999999998755311     


Q ss_pred             ---EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCc-----ceeE
Q psy15191        214 ---LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY-----EIYS  285 (312)
Q Consensus       214 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~  285 (312)
                         .+.....    -.......+|.++|....+-.-|..|..|++.......  ...+.++.+.++.-|-.     ...+
T Consensus       363 ~~~~vvaeve----vGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~--~g~~~~~v~~k~dV~y~pgh~~~~~g  436 (635)
T PRK02888        363 PRDAVVAEPE----LGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAY--KGEKVDPIVQKLDVHYQPGHNHASMG  436 (635)
T ss_pred             ccceEEEeec----cCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHh--ccccCCcceecccCCCccceeeecCC
Confidence               0000000    12223457899999988888899999999987621000  00111223343433322     2222


Q ss_pred             EEeccCCCeEEEEec
Q psy15191        286 LAASHDGTLLASACK  300 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~  300 (312)
                      =.-.|+|++|++...
T Consensus       437 ~t~~~dgk~l~~~nk  451 (635)
T PRK02888        437 ETKEADGKWLVSLNK  451 (635)
T ss_pred             CcCCCCCCEEEEccc
Confidence            234688999988754

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.42  E-value=0.00019  Score=61.66  Aligned_cols=153  Identities=14%  Similarity=0.078  Sum_probs=88.5

Q ss_pred             ECCCCCeEEEee-cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec------------------------
Q psy15191        144 FGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR------------------------  197 (312)
Q Consensus       144 ~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------------  197 (312)
                      +.|+|+.+...+ ..+.+.+ |..+++...... -.+....++++|+|+++++.+.                        
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~-Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni  278 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVM-VDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI  278 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEE-eCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence            345665543322 2334444 777776666554 2234466788888888877651                        


Q ss_pred             ----------------CCeEEEEEccC-----CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEec
Q psy15191        198 ----------------DRRWGLYKRQS-----SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGL  255 (312)
Q Consensus       198 ----------------d~~i~~wd~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~  255 (312)
                                      ++.|.+.|.++     ......+.        -......+.++|||++++.++ .++.|.|.|+
T Consensus       279 ~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIP--------VGKsPHGV~vSPDGkylyVanklS~tVSVIDv  350 (635)
T PRK02888        279 ARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVP--------VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDV  350 (635)
T ss_pred             HHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEE--------CCCCccceEECCCCCEEEEeCCCCCcEEEEEC
Confidence                            23355555554     22333333        334466899999999887666 5889999999


Q ss_pred             CCCCCCccccccccc-ceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLW-PEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ......-.-. .+.. ..+.+..- .......+|.++|+...|--.|++     |..|
T Consensus       351 ~k~k~~~~~~-~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsq-----v~kw  401 (635)
T PRK02888        351 RKLDDLFDGK-IKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQ-----IVKW  401 (635)
T ss_pred             hhhhhhhhcc-CCccceEEEeecc-CCCcceEEECCCCCEEEeEeecce-----eEEE
Confidence            8753210000 0000 01222222 334457889999988888765555     7776

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.41  E-value=6.7e-06  Score=68.54  Aligned_cols=74  Identities=22%  Similarity=0.205  Sum_probs=59.3

Q ss_pred             CCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      .....+.+++++|+...++.|+.||.|.+ |....-.  ......-..+.++|+|+|..+++|+..|.+.+||+.-.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            35567899999999999999999999999 4433211  12234456788999999999999999999999998754

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.31  E-value=0.00073  Score=56.08  Aligned_cols=177  Identities=11%  Similarity=0.095  Sum_probs=91.6

Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEECC-----CC---CeEEEeecCCeEEEeccc
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFGP-----RG---DYIIAHGFQGSLHLDVTT  166 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~-----~~---~~l~~~~~~~~i~~d~~~  166 (312)
                      +-.+++.|+.+|.+.|.|++.+.-  +.......   .......++++.|..     |+   -.+++|...|.+.+    
T Consensus        96 ~iGFvaigy~~G~l~viD~RGPav--I~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~----  169 (395)
T PF08596_consen   96 DIGFVAIGYESGSLVVIDLRGPAV--IYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLT----  169 (395)
T ss_dssp             BTSEEEEEETTSEEEEEETTTTEE--EEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEE----
T ss_pred             CCcEEEEEecCCcEEEEECCCCeE--EeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEE----
Confidence            334889999999999999987443  33333222   112344677777752     33   45888999999887    


Q ss_pred             Cceee------------eecccCCceeEEE-ECCC-C-------------------CEEEEEecCCeEEEEEccCCCeEE
Q psy15191        167 WKQIQ------------TLPCHQLTITQLA-FSPD-D-------------------THLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       167 ~~~~~------------~~~~~~~~v~~~~-~~~~-~-------------------~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      +++.-            ....+.++|..+. ++.+ |                   ..++....+..++++...+.+...
T Consensus       170 fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~  249 (395)
T PF08596_consen  170 FKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAH  249 (395)
T ss_dssp             EEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEE
T ss_pred             EEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCCCcccc
Confidence            33221            1113445555554 3221 0                   123444557789999988766544


Q ss_pred             EEeccCCCCcccceeeEEEEE-----cCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec----cCccee
Q psy15191        214 LVACSDKTNGVHKRIIWGVAW-----SHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG----HGYEIY  284 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~  284 (312)
                      ....       .......+.+     ...+..|++-..+|.|++|.+..-.            ++..+.-    ....+.
T Consensus       250 K~~~-------~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk------------ei~~~~l~~~~d~~~~~  310 (395)
T PF08596_consen  250 KSFD-------DPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK------------EIKSVSLPPPLDSRRLS  310 (395)
T ss_dssp             EE-S-------S-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--------------EEEEEE-SS---HHHHT
T ss_pred             eeec-------cccccceEEEEeecccCCceEEEEEECCCcEEEEECCCch------------HhhcccCCCcccccccc
Confidence            3331       2222333344     2356678888999999999987653            3333332    223455


Q ss_pred             EEEeccCCCeEEEEe
Q psy15191        285 SLAASHDGTLLASAC  299 (312)
Q Consensus       285 ~~~~s~~~~~l~s~s  299 (312)
                      ...++++|+.+.-.|
T Consensus       311 ~ssis~~Gdi~~~~g  325 (395)
T PF08596_consen  311 SSSISRNGDIFYWTG  325 (395)
T ss_dssp             T-EE-TTS-EEEE-S
T ss_pred             ccEECCCCCEEEEeC
Confidence            677788888776664

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.30  E-value=0.00053  Score=53.15  Aligned_cols=149  Identities=16%  Similarity=0.067  Sum_probs=87.7

Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee-cc
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL-PC  175 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~-~~  175 (312)
                      .+..+++++.++.|..||..+++..+.....     ......   . ...+..++++..++.+.. |..+++..-.. ..
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~-----~~~~~~---~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~  105 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLP-----GPISGA---P-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLT  105 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEECS-----SCGGSG---E-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeecc-----ccccce---e-eecccccccccceeeeEecccCCcceeeeeccc
Confidence            4457888889999999999987655544432     110111   1 224455666667776666 88888887763 32


Q ss_pred             cC---CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc---ceee-EEEEEcCCCceEEEeccCC
Q psy15191        176 HQ---LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH---KRII-WGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       176 ~~---~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~---~~~v-~~~~~~~~~~~l~s~~~dg  248 (312)
                      ..   .....+....++..++.+..++.|..+|+++++.+............+   ...+ ..+.+. ++ .++.++.++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g  183 (238)
T PF13360_consen  106 SSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDG  183 (238)
T ss_dssp             SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTS
T ss_pred             cccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCC
Confidence            21   111222222247788888889999999999998877776532211100   0111 223333 44 666666677


Q ss_pred             e-EEEEecCCC
Q psy15191        249 V-CVVWGLGEP  258 (312)
Q Consensus       249 ~-i~iwd~~~~  258 (312)
                      . +.+ |+.++
T Consensus       184 ~~~~~-d~~tg  193 (238)
T PF13360_consen  184 RVVAV-DLATG  193 (238)
T ss_dssp             SEEEE-ETTTT
T ss_pred             eEEEE-ECCCC
Confidence            5 555 88887

...

>KOG1008|consensus

Probab=98.28  E-value=8.1e-07  Score=74.35  Aligned_cols=202  Identities=12%  Similarity=0.100  Sum_probs=120.9

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------ccccccCCC-CCceEEEEe----CCCcEE
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDS-KQLHLLSCS----MDKSII  112 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~-~~~~l~~~~----~d~~i~  112 (312)
                      ..+.|+++.-+    .+...++.|..+|.|.+-........          .....++.+ +...|++|-    .|..+.
T Consensus        57 qy~kcva~~y~----~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~  132 (783)
T KOG1008|consen   57 QYVKCVASFYG----NDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLK  132 (783)
T ss_pred             CCceeehhhcC----CchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcc
Confidence            45677776655    33457889999999999877654331          111122222 223455552    356799


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC-CCC
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDT  190 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~  190 (312)
                      |||+.+.-...........  +......+++|-.+.+.+++|.....+.+ |++ |.......-.+..+..+..+| .++
T Consensus       133 Iwdi~s~ltvPke~~~fs~--~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR-qs~~~~~svnTk~vqG~tVdp~~~n  209 (783)
T KOG1008|consen  133 IWDINSLLTVPKESPLFSS--STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR-QSLDSVSSVNTKYVQGITVDPFSPN  209 (783)
T ss_pred             ceecccccCCCcccccccc--ccccCccccccccCcchhhcccccchhhhhhhh-hhhhhhhhhhhhhcccceecCCCCC
Confidence            9999874222111111111  12334557889989999999999989998 555 222222222345677888889 788


Q ss_pred             EEEEEecCCeEEEEE-ccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCc-eEEEec-cCCeEEEEecCCCCC
Q psy15191        191 HLVSVSRDRRWGLYK-RQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTIS-RDGVCVVWGLGEPPT  260 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd-~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~~~  260 (312)
                      ++++-. ||.|.+|| .+.-+. +..+.....+   ....+..++|+|... .+++.. ..++|+++|+.....
T Consensus       210 Y~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~---~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~t  279 (783)
T KOG1008|consen  210 YFCSNS-DGDIAIWDTYRNIENPLQIILRNENK---KPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVGT  279 (783)
T ss_pred             ceeccc-cCceeeccchhhhccHHHHHhhCCCC---cccceeeEEeccCCcchhhhhccCcceEEEecccccCC
Confidence            887655 99999999 433222 2222111111   233588999999643 445555 456899999876543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.26  E-value=0.00017  Score=60.29  Aligned_cols=133  Identities=20%  Similarity=0.133  Sum_probs=80.1

Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE---ecccCceeeeecccCCceeEEE
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL---DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      ..+.++++.+++...+....     ++   -..-+|+|||+.|+.+ ..+|...+   |+......+ +....+.-..=.
T Consensus       218 ~~i~~~~l~~g~~~~i~~~~-----g~---~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps  288 (425)
T COG0823         218 PRIYYLDLNTGKRPVILNFN-----GN---NGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPS  288 (425)
T ss_pred             ceEEEEeccCCccceeeccC-----Cc---cCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCcc
Confidence            45889999886654444322     22   2346899999987754 45666544   666655333 432233333668


Q ss_pred             ECCCCCEEEEEec-CCe--EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCe--EEEEecCCC
Q psy15191        185 FSPDDTHLVSVSR-DRR--WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGV--CVVWGLGEP  258 (312)
Q Consensus       185 ~~~~~~~l~~~~~-d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~--i~iwd~~~~  258 (312)
                      |+|||++++-.+. .|.  |.+++...... ..+...       ...-..-.|+|||++|+..+. +|.  |.+.|+.++
T Consensus       289 ~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~-------~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~  360 (425)
T COG0823         289 WSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFS-------GGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASG  360 (425)
T ss_pred             CCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeecc-------CCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCC
Confidence            9999999887654 344  66666665544 333321       111115689999999887764 344  566666555

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.24  E-value=0.0014  Score=52.22  Aligned_cols=216  Identities=11%  Similarity=0.072  Sum_probs=111.5

Q ss_pred             EeCCCCceEEEEccccC-cEEEEEEecCcCcCCCCceEEEec--CCCcEEEeeecCCccc-------ccccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKS-KVMAVKWVLNTSLDPEHKDLVSCS--LDKTAILWKYVSEGNY-------LPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~  101 (312)
                      ||..+..+...+.-..+ ....+.+.....++.|+++++..-  --..|.|-|+..++..       +....+..+  ..
T Consensus        72 ~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~--~~  149 (342)
T PF06433_consen   72 WDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGN--RG  149 (342)
T ss_dssp             EETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEET--TE
T ss_pred             EecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCC--Cc
Confidence            78877777665543322 222222211112222255443321  1234555555554442       111122222  36


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc-eeEEEECCCCCeEEEeecCCeEEE-ecccCceeee--e----
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG-FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT--L----  173 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~--~----  173 (312)
                      +.+-+.||.+.-..+...-........  .+.....+ +..-++...+..++-.+.+|.|+- |+..-...-.  .    
T Consensus       150 F~~lC~DGsl~~v~Ld~~Gk~~~~~t~--~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t  227 (342)
T PF06433_consen  150 FSMLCGDGSLLTVTLDADGKEAQKSTK--VFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLT  227 (342)
T ss_dssp             EEEEETTSCEEEEEETSTSSEEEEEEE--ESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-
T ss_pred             eEEEecCCceEEEEECCCCCEeEeecc--ccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccC
Confidence            888999999998888743222222112  22222222 223345555555665778888776 5443221111  1    


Q ss_pred             --c----ccCCceeEEEECCCCCEEEEEecC----------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC
Q psy15191        174 --P----CHQLTITQLAFSPDDTHLVSVSRD----------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD  237 (312)
Q Consensus       174 --~----~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  237 (312)
                        .    -..+...-+++++..+.|+.....          ..|-++|+.+.+++..+.        ...++.++..+.+
T Consensus       228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~--------l~~~~~Si~Vsqd  299 (342)
T PF06433_consen  228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP--------LEHPIDSIAVSQD  299 (342)
T ss_dssp             HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE--------EEEEESEEEEESS
T ss_pred             ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe--------CCCccceEEEccC
Confidence              0    012334457888766555553221          138888999888888877        4456778999987


Q ss_pred             Cc-eEEEe-ccCCeEEEEecCCCC
Q psy15191        238 SR-YFLTI-SRDGVCVVWGLGEPP  259 (312)
Q Consensus       238 ~~-~l~s~-~~dg~i~iwd~~~~~  259 (312)
                      .+ +|++. ..++.|.+||..+++
T Consensus       300 ~~P~L~~~~~~~~~l~v~D~~tGk  323 (342)
T PF06433_consen  300 DKPLLYALSAGDGTLDVYDAATGK  323 (342)
T ss_dssp             SS-EEEEEETTTTEEEEEETTT--
T ss_pred             CCcEEEEEcCCCCeEEEEeCcCCc
Confidence            65 55544 568999999999874

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG3617|consensus

Probab=98.24  E-value=0.0001  Score=64.42  Aligned_cols=98  Identities=13%  Similarity=0.085  Sum_probs=72.7

Q ss_pred             EEEEEecCcCcCCCCceEEEec----CCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191         51 MAVKWVLNTSLDPEHKDLVSCS----LDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPT  119 (312)
Q Consensus        51 ~~~~~~~~~~~~~~~~~l~s~~----~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  119 (312)
                      +-..|+|.      ..++|.++    ..|.|.||- +++++       +......++|..-.|+.+-.-|.+.+|...+.
T Consensus        19 ti~SWHPs------ePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~   91 (1416)
T KOG3617|consen   19 TISSWHPS------EPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTT   91 (1416)
T ss_pred             cccccCCC------CceeEEEEecCCCCceEEEEe-cCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCc
Confidence            34567777      67777665    457888873 33333       45555677888778889999999999988764


Q ss_pred             cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE
Q psy15191        120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL  162 (312)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~  162 (312)
                      +..   +    ....|..++..+.|+++|..++++..-|.+.+
T Consensus        92 e~h---t----v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~l  127 (1416)
T KOG3617|consen   92 ETH---T----VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHL  127 (1416)
T ss_pred             eee---e----eccCCCCCceeEEecCCCCeEEEcCCCceeEE
Confidence            321   1    12368889999999999999999999999988

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.24  E-value=0.0016  Score=54.74  Aligned_cols=176  Identities=8%  Similarity=-0.050  Sum_probs=101.1

Q ss_pred             CceEEEecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc--CCC
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV--GGN  135 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~  135 (312)
                      +..++.++.+|.+.-+|.++++..=       +...+.- .+..++.+..++.+..+|.++++..+........+  ...
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~  198 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV-SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGE  198 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCC
Confidence            3467777889999999998887621       1111111 23367778889999999999977666554321110  011


Q ss_pred             ccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccC----C---ceeEEEECC--CCCEEEEEecCCeEEEEE
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ----L---TITQLAFSP--DDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~----~---~v~~~~~~~--~~~~l~~~~~d~~i~~wd  205 (312)
                      ..++    .  .+..++.+..+|.+.. |..+++.+-......    .   ....+.-+|  .+..++.++.+|.+..+|
T Consensus       199 ~sP~----v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald  272 (394)
T PRK11138        199 SAPA----T--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALD  272 (394)
T ss_pred             CCCE----E--ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEE
Confidence            1111    1  1234666677777665 777665543332100    0   111122233  345677778899999999


Q ss_pred             ccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        206 RQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ..+++.+-.....      .   ...+..  .+..++.++.+|.+..+|..++
T Consensus       273 ~~tG~~~W~~~~~------~---~~~~~~--~~~~vy~~~~~g~l~ald~~tG  314 (394)
T PRK11138        273 LRSGQIVWKREYG------S---VNDFAV--DGGRIYLVDQNDRVYALDTRGG  314 (394)
T ss_pred             CCCCCEEEeecCC------C---ccCcEE--ECCEEEEEcCCCeEEEEECCCC
Confidence            9988765433211      0   111222  4556777778888999888776

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.20  E-value=5e-05  Score=63.69  Aligned_cols=134  Identities=12%  Similarity=0.166  Sum_probs=73.1

Q ss_pred             CccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      ....+..+.++|+|+++++++ +|...+ ....|+..     ..+.-...+|.+.+ .+++-...+.|.++.--......
T Consensus        31 ~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k-----~~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k  103 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNK-----AFGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVK  103 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEE-----EEEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT-
T ss_pred             CCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCccc-----ccCceeEEEEecCc-cEEEEECCCeEEEEEcCccccce
Confidence            334578899999999999854 455555 32223222     23456678999855 46677778889997322222211


Q ss_pred             EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      .+..        ...+..+-.   |.+|+..+.+ .|.+||+.++.            .++.+...  +|..+.|+++|+
T Consensus       104 ~i~~--------~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~------------~i~~i~v~--~vk~V~Ws~~g~  157 (443)
T PF04053_consen  104 SIKL--------PFSVEKIFG---GNLLGVKSSD-FICFYDWETGK------------LIRRIDVS--AVKYVIWSDDGE  157 (443)
T ss_dssp             ------------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--------------EEEEESS---E-EEEEE-TTSS
T ss_pred             EEcC--------CcccceEEc---CcEEEEECCC-CEEEEEhhHcc------------eeeEEecC--CCcEEEEECCCC
Confidence            2221        112233322   8888777655 79999998873            56666532  489999999999


Q ss_pred             eEEEEecC
Q psy15191        294 LLASACKA  301 (312)
Q Consensus       294 ~l~s~s~d  301 (312)
                      +++-.+.+
T Consensus       158 ~val~t~~  165 (443)
T PF04053_consen  158 LVALVTKD  165 (443)
T ss_dssp             EEEEE-S-
T ss_pred             EEEEEeCC
Confidence            99999654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG1275|consensus

Probab=98.19  E-value=7.6e-05  Score=65.53  Aligned_cols=173  Identities=13%  Similarity=0.204  Sum_probs=116.1

Q ss_pred             CceEEEecCCCcEEEeeecCCccccccccc------CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYLPYHMR------DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      +..++-|+-...+..+|+.+.+.....-..      .-.++..+.+|...|+|.+-|.++.+  .+.++     ..|.+.
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~--~iht~-----~aHs~s  219 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFE--TIHTF-----DAHSGS  219 (1118)
T ss_pred             CcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCc--eeeee-----eccccc
Confidence            345666766667777888776653221111      12355689999999999999998733  33333     478888


Q ss_pred             eeEEEECCCCCeEEEeecCCe---------EEE-ecccCceeeeecccCCceeEEEECCC-CCEEEEEecCCeEEEEEcc
Q psy15191        139 FYGCKFGPRGDYIIAHGFQGS---------LHL-DVTTWKQIQTLPCHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       139 v~~~~~~~~~~~l~~~~~~~~---------i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~  207 (312)
                      +.+  |+-.|+.|++++..+.         +++ |++..+.+..++-+.++ .-+.|+|. ...++.++..|...+-|..
T Consensus       220 iSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~  296 (1118)
T KOG1275|consen  220 ISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTA  296 (1118)
T ss_pred             eee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeecccc
Confidence            865  4557999999987554         344 56665555555433333 44677773 4568888899999999943


Q ss_pred             C---CC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        208 S---SG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       208 ~---~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      +   .. ....+..       ....+..++++++++.+|.|..+|.|.+|.
T Consensus       297 ~lsNP~~~~~~v~p-------~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  297 TLSNPPAGVKMVNP-------NGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             ccCCCccceeEEcc-------CCCcceeEEecCCCceEEEecccCcEeeec
Confidence            3   21 1111111       445589999999999999999999999997

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.16  E-value=0.0018  Score=49.98  Aligned_cols=205  Identities=11%  Similarity=0.098  Sum_probs=98.9

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccccc---------CCCCCceEEEEeCCCcE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMR---------DDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~---------~~~~~~~l~~~~~d~~i  111 (312)
                      +.+.+-...+..++|.|+     .+.+++.....+.|...+.+ ++........         .-.++.++++.-.++.+
T Consensus        15 ~~l~g~~~e~SGLTy~pd-----~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L   88 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPD-----TGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRL   88 (248)
T ss_dssp             EE-TT--S-EEEEEEETT-----TTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEE
T ss_pred             eECCCccCCccccEEcCC-----CCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcE
Confidence            355566667888888886     24466666677777666654 3332211111         11233345555468888


Q ss_pred             EEEcCCCCccee----eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE---ec--ccCceeeee-------cc
Q psy15191        112 IVWAPDPTTGLW----LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---DV--TTWKQIQTL-------PC  175 (312)
Q Consensus       112 ~i~d~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~--~~~~~~~~~-------~~  175 (312)
                      .++++.......    ...........++..+..++|+|.++.|+++-...-..+   +.  ....+....       ..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~  168 (248)
T PF06977_consen   89 YIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKL  168 (248)
T ss_dssp             EEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT-
T ss_pred             EEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccc
Confidence            888884432211    112222222345667899999998888887766655554   22  111111110       12


Q ss_pred             cCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc--ccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191        176 HQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG--VHKRIIWGVAWSHDSRYFLTISRDGVCVV  252 (312)
Q Consensus       176 ~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  252 (312)
                      ....+.+++++|. +.+++.+..+..|..+| ..++....+.-......  ..-...-.|+|.++|++.++ ++-+..++
T Consensus       169 ~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlfy~  246 (248)
T PF06977_consen  169 FVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPNLFYR  246 (248)
T ss_dssp             -SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTTEEEE
T ss_pred             eeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCceEEE
Confidence            3445788999995 55667777888999999 44665555543321100  01234668999999976655 45665554


Q ss_pred             E
Q psy15191        253 W  253 (312)
Q Consensus       253 w  253 (312)
                      |
T Consensus       247 f  247 (248)
T PF06977_consen  247 F  247 (248)
T ss_dssp             E
T ss_pred             e
Confidence            4

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG1920|consensus

Probab=98.12  E-value=0.00075  Score=61.41  Aligned_cols=197  Identities=10%  Similarity=0.119  Sum_probs=122.7

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCC---
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPD---  117 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~---  117 (312)
                      ..|.++.|..+      ...++.+..+|.|.+-|.++...       ..+....+++++..++..+..+++.+..-.   
T Consensus        69 ~~i~s~~fl~d------~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~  142 (1265)
T KOG1920|consen   69 DEIVSVQFLAD------TNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEP  142 (1265)
T ss_pred             cceEEEEEecc------cceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccc
Confidence            57888888887      66777777888888888877654       466777788999899888888888765431   


Q ss_pred             -CCcce--------------eee---eeeec-------ccC------C---CccceeEEEECCCCCeEEEee-----cCC
Q psy15191        118 -PTTGL--------------WLE---TARVG-------EVG------G---NTLGFYGCKFGPRGDYIIAHG-----FQG  158 (312)
Q Consensus       118 -~~~~~--------------~~~---~~~~~-------~~~------~---~~~~v~~~~~~~~~~~l~~~~-----~~~  158 (312)
                       ..+..              +-.   .+...       ...      +   ....=.++.|--||+++++..     ...
T Consensus       143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence             11110              000   00000       000      0   011123589999999988732     236


Q ss_pred             eEEEecccCceeeeec----ccCCceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEE
Q psy15191        159 SLHLDVTTWKQIQTLP----CHQLTITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG  231 (312)
Q Consensus       159 ~i~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~  231 (312)
                      .+++    |+....+.    ...+.-.+++|-|.|..+++-.   .|+.|.+|.-+.... ..+..+...   ....+..
T Consensus       223 kirV----~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~h-g~f~l~~p~---de~~ve~  294 (1265)
T KOG1920|consen  223 KIRV----YDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRH-GEFVLPFPL---DEKEVEE  294 (1265)
T ss_pred             eEEE----ecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccc-cccccCCcc---cccchhe
Confidence            7888    55543222    2233446799999999988853   456788888654222 111111111   3344889


Q ss_pred             EEEcCCCceEEE---eccCCeEEEEecCCC
Q psy15191        232 VAWSHDSRYFLT---ISRDGVCVVWGLGEP  258 (312)
Q Consensus       232 ~~~~~~~~~l~s---~~~dg~i~iwd~~~~  258 (312)
                      ++|+.++..||.   ......|++|-+.+.
T Consensus       295 L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  295 LAWNSNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             eeecCCCCceeeeecccccceEEEEEecCe
Confidence            999999999987   445556999976543

>smart00320 WD40 WD40 repeats

Probab=98.12  E-value=1.1e-05  Score=42.21  Aligned_cols=39  Identities=38%  Similarity=0.511  Sum_probs=34.5

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEee
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK   81 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~   81 (312)
                      ++++..+..|...|.++.|.+.      +..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPD------GKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCC------CCEEEEecCCCeEEEcC
Confidence            4567778889999999999998      78999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4640|consensus

Probab=98.10  E-value=2.4e-05  Score=65.75  Aligned_cols=77  Identities=10%  Similarity=0.188  Sum_probs=65.0

Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeE-EEEEcCCCceEEEeccCCeEEEEe
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW-GVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      -...+.-+.|+|.-..+|++..+|.+.+..+. .+++..++.       +...++ +++|.|||++||.|-.||+|++-|
T Consensus        19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~-------p~~~v~~sL~W~~DGkllaVg~kdG~I~L~D   90 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPI-------PGENVTASLCWRPDGKLLAVGFKDGTIRLHD   90 (665)
T ss_pred             cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccC-------CCCccceeeeecCCCCEEEEEecCCeEEEEE
Confidence            34567889999999999999999999999988 666666664       333444 999999999999999999999999


Q ss_pred             cCCCCC
Q psy15191        255 LGEPPT  260 (312)
Q Consensus       255 ~~~~~~  260 (312)
                      ++.+..
T Consensus        91 ve~~~~   96 (665)
T KOG4640|consen   91 VEKGGR   96 (665)
T ss_pred             ccCCCc
Confidence            998854

>KOG1645|consensus

Probab=98.07  E-value=3.2e-05  Score=61.45  Aligned_cols=78  Identities=10%  Similarity=0.086  Sum_probs=65.7

Q ss_pred             CCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCC
Q psy15191        133 GGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       133 ~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~  209 (312)
                      +.+...|.+++|+|..+ ++..++.+..|.+ |+++-.....+..+ ..+.+++|.-|. .+++.|-.+|.|.+||++..
T Consensus       190 p~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  190 PGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             cccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence            46777899999999877 6888999999999 99988888888766 789999999865 46777778999999999976


Q ss_pred             Ce
Q psy15191        210 GR  211 (312)
Q Consensus       210 ~~  211 (312)
                      +.
T Consensus       269 ~~  270 (463)
T KOG1645|consen  269 EG  270 (463)
T ss_pred             Cc
Confidence            54

>KOG4640|consensus

Probab=98.06  E-value=3.1e-05  Score=65.08  Aligned_cols=94  Identities=22%  Similarity=0.362  Sum_probs=76.7

Q ss_pred             ccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee-EEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT-QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      ...+.-+.|+|.-..+|.+..+|.+.+ ... |+.+-.+.-+...++ +++|.|||+.|+.|-.||+|++-|..++..+.
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~   98 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV   98 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence            345778999999999999999999988 444 888888886777777 99999999999999999999999999988776


Q ss_pred             EEeccCCCCcccceeeEEEEEcC
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSH  236 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~  236 (312)
                      .....      ....|.++.|++
T Consensus        99 ~~~~s------~e~~is~~~w~~  115 (665)
T KOG4640|consen   99 SFLFS------VETDISKGIWDR  115 (665)
T ss_pred             ccccc------cccchheeeccc
Confidence            53221      455677777764

>KOG3621|consensus

Probab=98.04  E-value=8.8e-05  Score=63.25  Aligned_cols=142  Identities=15%  Similarity=0.095  Sum_probs=95.9

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE--
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL--  212 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--  212 (312)
                      ..+.--+++..+++++.|+..|.+++ .......+.... +..+.+..+..+++..++|.|+..|.|.++-+....+.  
T Consensus        34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~  113 (726)
T KOG3621|consen   34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL  113 (726)
T ss_pred             ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence            34444566778999999999999999 333333322211 34456677788999999999999999999988763322  


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                      ..+......   |+..|++++|++++..+++|...|+|..-.+.......        -..+.+..-.+.|..+...
T Consensus       114 ~~~t~~d~~---~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~--------~~~q~il~~ds~IVQlD~~  179 (726)
T KOG3621|consen  114 DYVTPCDKS---HKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFL--------SKSQEILSEDSEIVQLDYL  179 (726)
T ss_pred             eeecccccc---CCceEEEEEecccccEEeecCCCceEEEEEechhhhhc--------cccceeeccCcceEEeecc
Confidence            122221111   78899999999999999999999999988777621000        0233344445666666653

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.03  E-value=0.0048  Score=50.23  Aligned_cols=95  Identities=11%  Similarity=0.032  Sum_probs=42.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCce-EEEecCCCc--EEEeeecCCccccccccc--------CCCCCc
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD-LVSCSLDKT--AILWKYVSEGNYLPYHMR--------DDSKQL  100 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-l~s~~~dg~--i~vw~~~~~~~~~~~~~~--------~~~~~~  100 (312)
                      -|+.+|..+..|..+...-..+-|... .|.++|+. |+.+..||.  +.+-|+.+++...+.-.+        .+++..
T Consensus        15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~-~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~   93 (386)
T PF14583_consen   15 IDPDTGHRVTRLTPPDGHSHRLYFYQN-CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDR   93 (386)
T ss_dssp             E-TTT--EEEE-S-TTS-EE---TTS---B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSS
T ss_pred             eCCCCCceEEEecCCCCcccceeecCC-CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCC
Confidence            378888888888866554555544433 44555755 455555665  555577776653332221        123344


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeee
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETA  127 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~  127 (312)
                      .++-...+..|+-.|+++.+...+...
T Consensus        94 ~~~Yv~~~~~l~~vdL~T~e~~~vy~~  120 (386)
T PF14583_consen   94 ALYYVKNGRSLRRVDLDTLEERVVYEV  120 (386)
T ss_dssp             EEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred             eEEEEECCCeEEEEECCcCcEEEEEEC
Confidence            554444556777788888665444443

>KOG1645|consensus

Probab=98.01  E-value=6.1e-05  Score=59.93  Aligned_cols=90  Identities=23%  Similarity=0.361  Sum_probs=70.6

Q ss_pred             ecccCceeeeecccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ce
Q psy15191        163 DVTTWKQIQTLPCHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RY  240 (312)
Q Consensus       163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~  240 (312)
                      +..+.+...-+..+...|.+++|+|..+ ++..++.+..|+|.|+++......+..        ...+++++|.-+. ++
T Consensus       179 ~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a--------~~~~wSC~wDlde~h~  250 (463)
T KOG1645|consen  179 ESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIA--------YNQIWSCCWDLDERHV  250 (463)
T ss_pred             ccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheec--------cCCceeeeeccCCcce
Confidence            4444444444557888999999999766 678899999999999998877766663        3679999998766 46


Q ss_pred             EEEeccCCeEEEEecCCCCC
Q psy15191        241 FLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       241 l~s~~~dg~i~iwd~~~~~~  260 (312)
                      +..|-.+|.|.|||++.+..
T Consensus       251 IYaGl~nG~VlvyD~R~~~~  270 (463)
T KOG1645|consen  251 IYAGLQNGMVLVYDMRQPEG  270 (463)
T ss_pred             eEEeccCceEEEEEccCCCc
Confidence            77777899999999987643

>KOG3621|consensus

Probab=98.01  E-value=6.7e-05  Score=63.94  Aligned_cols=115  Identities=17%  Similarity=0.071  Sum_probs=81.3

Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      +...|.--+++..+++++.|+.-|.+++|+-..+..... +...     ..+.+.....+++..++|.|+..|.|.++-+
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~-~~~~-----~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql  105 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKL-KNEG-----ATGITCVRSVSSVEYLVAAGTASGRVSVFQL  105 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcc-cccC-----ccceEEEEEecchhHhhhhhcCCceEEeehh
Confidence            444555556777899999999999999999775543322 2110     3344666788999999999999999999988


Q ss_pred             CCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .........       .+... ..|...|++++|++++..+.+|...|+
T Consensus       106 ~~~~p~~~~-------~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gk  147 (726)
T KOG3621|consen  106 NKELPRDLD-------YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGK  147 (726)
T ss_pred             hccCCCcce-------eeccccccCCceEEEEEecccccEEeecCCCce
Confidence            775433221       11111 237889999999999999999954443

>KOG1008|consensus

Probab=98.01  E-value=1.4e-06  Score=72.93  Aligned_cols=175  Identities=16%  Similarity=0.172  Sum_probs=111.2

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeec----CCeEEEecccCcee
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGF----QGSLHLDVTTWKQI  170 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~----~~~i~~d~~~~~~~  170 (312)
                      +.+...++.|..+|.|-+-..+...-.     .....+++..+.++++|++ |.+.|++|-.    |..+.|    |++.
T Consensus        67 ~~d~cIlavG~atG~I~l~s~r~~hdS-----s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~I----wdi~  137 (783)
T KOG1008|consen   67 GNDRCILAVGSATGNISLLSVRHPHDS-----SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKI----WDIN  137 (783)
T ss_pred             CCchhhhhhccccCceEEeecCCcccc-----cceecccccccccccccccccHHHHHhhhhhhcccCCccc----eecc
Confidence            334557889999999999887753322     1112246777899999998 5667777643    445666    5544


Q ss_pred             eeec----------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcC-CC
Q psy15191        171 QTLP----------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSH-DS  238 (312)
Q Consensus       171 ~~~~----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~~  238 (312)
                      ..+.          +......+++|..+.+.+++|...+.+.++|++... ....+         ....+..+...| .+
T Consensus       138 s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv---------nTk~vqG~tVdp~~~  208 (783)
T KOG1008|consen  138 SLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV---------NTKYVQGITVDPFSP  208 (783)
T ss_pred             cccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh---------hhhhcccceecCCCC
Confidence            4322          133455688999899999999999999999998321 11111         333466778888 77


Q ss_pred             ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC----cceeEEEeccCCC-eEEEEe
Q psy15191        239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG----YEIYSLAASHDGT-LLASAC  299 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~-~l~s~s  299 (312)
                      .|+++-. ||.|-+||......          .++..+....    ..+..++|+|... ++++.+
T Consensus       209 nY~cs~~-dg~iAiwD~~rnie----------npl~~i~~~~N~~~~~l~~~aycPtrtglla~l~  263 (783)
T KOG1008|consen  209 NYFCSNS-DGDIAIWDTYRNIE----------NPLQIILRNENKKPKQLFALAYCPTRTGLLAVLS  263 (783)
T ss_pred             Cceeccc-cCceeeccchhhhc----------cHHHHHhhCCCCcccceeeEEeccCCcchhhhhc
Confidence            7887765 99999999422110          0222222222    2488899999643 444444

>KOG4649|consensus

Probab=98.00  E-value=0.0033  Score=47.64  Aligned_cols=109  Identities=16%  Similarity=0.169  Sum_probs=78.1

Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCC
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL  178 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~  178 (312)
                      .+++.|+..+.+.--|..+++..+.....        .++.+-+.- -|++++.|...|.+++ +.+++.....+.....
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~ilg--------~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~   94 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAILG--------VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILET   94 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehhhC--------ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhh
Confidence            47888999999999998887655543322        112221111 5778999999999999 8888877666653222


Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      --......+++..+..++.|+..+..|.++...+...+.
T Consensus        95 vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskc  133 (354)
T KOG4649|consen   95 VKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKC  133 (354)
T ss_pred             hccceEEcCCCceEEEecCCCcEEEecccccceEEeccc
Confidence            223345678899999999999999999999888776554

>KOG3617|consensus

Probab=98.00  E-value=1.9e-05  Score=68.69  Aligned_cols=109  Identities=18%  Similarity=0.279  Sum_probs=85.2

Q ss_pred             eEEEECCCCCeEEEee----cCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191        140 YGCKFGPRGDYIIAHG----FQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~----~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  215 (312)
                      +-..|+|...++++++    ..|.+.|-..++++.+... .+-.+++++|+|..-.|+.|=.-|.+.+|...+.+.....
T Consensus        19 ti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~   97 (1416)
T KOG3617|consen   19 TISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVV   97 (1416)
T ss_pred             cccccCCCCceeEEEEecCCCCceEEEEecCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeec
Confidence            4468999999988876    4678888555555444433 3345678999998888888888899999998765544333


Q ss_pred             eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      ..       |..+|..+.|||+|..|+++..-|.|.+|...
T Consensus        98 ~t-------h~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   98 ET-------HPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             cC-------CCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            32       88999999999999999999999999999876

>KOG2114|consensus

Probab=97.92  E-value=0.0017  Score=57.08  Aligned_cols=178  Identities=14%  Similarity=0.135  Sum_probs=108.3

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc-eeEEEECCCCCeEEEeecCCe-----EEE-ecccCc
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG-FYGCKFGPRGDYIIAHGFQGS-----LHL-DVTTWK  168 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~~-----i~~-d~~~~~  168 (312)
                      ++.+..++.|+.+|.|.+++-.-   ....     .+..+... +..+-...+..+|++.+.|+.     +++ +++.-+
T Consensus        32 ~s~~~~vvigt~~G~V~~Ln~s~---~~~~-----~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~  103 (933)
T KOG2114|consen   32 SSSTGSVVIGTADGRVVILNSSF---QLIR-----GFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD  103 (933)
T ss_pred             cCCCceEEEeeccccEEEecccc---eeee-----hheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence            34555899999999998886542   1111     12233333 333333334467777665543     566 332221


Q ss_pred             ------eee--eec-----ccCCceeEEEECCCCCEEEEEecCCeEEEEEcc---CCCeEEEEeccCCCCcccceeeEEE
Q psy15191        169 ------QIQ--TLP-----CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ---SSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       169 ------~~~--~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                            ...  ...     ....++.+++.+.+-+.+|.|-.+|.|..+.-.   .......+...      ...+|+++
T Consensus       104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~------~~~pITgL  177 (933)
T KOG2114|consen  104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHR------GKEPITGL  177 (933)
T ss_pred             CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeecc------CCCCceee
Confidence                  110  011     135678899999998999999999999988532   11111111111      56789999


Q ss_pred             EEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        233 AWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       233 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ++..+++.++-...-..|.+|.+...+           +....+..|+.++++.+|++....++++
T Consensus       178 ~~~~d~~s~lFv~Tt~~V~~y~l~gr~-----------p~~~~ld~~G~~lnCss~~~~t~qfIca  232 (933)
T KOG2114|consen  178 ALRSDGKSVLFVATTEQVMLYSLSGRT-----------PSLKVLDNNGISLNCSSFSDGTYQFICA  232 (933)
T ss_pred             EEecCCceeEEEEecceeEEEEecCCC-----------cceeeeccCCccceeeecCCCCccEEEe
Confidence            999888873333334469999987443           1456677888899999998776645544

>smart00320 WD40 WD40 repeats

Probab=97.91  E-value=3.9e-05  Score=39.95  Aligned_cols=38  Identities=37%  Similarity=0.496  Sum_probs=32.8

Q ss_pred             ceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEE
Q psy15191        168 KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd  205 (312)
                      +....+..|...|.++.|++++..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34455567888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.84  E-value=0.00051  Score=57.57  Aligned_cols=143  Identities=20%  Similarity=0.146  Sum_probs=85.0

Q ss_pred             ccceeEEEECCCCCeEEEee--cC--CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe-cCCe--EEEEEcc
Q psy15191        136 TLGFYGCKFGPRGDYIIAHG--FQ--GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRR--WGLYKRQ  207 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~--~~--~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~--i~~wd~~  207 (312)
                      ...+..-+|+|+++.++...  ..  ..+.+ ++.+.+...... ..+.-..-+|+|||++|+.+. .||.  |++.|+.
T Consensus       192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~  270 (425)
T COG0823         192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD  270 (425)
T ss_pred             CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence            34456678899988765442  12  23555 666665544443 333344568999999877654 4555  6777777


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CC--eEEEEecCCCCCCcccccccccceeEEeeccCccee
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY  284 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  284 (312)
                      ...... +..       ..+.-+.-.|+|||++++-.+. .|  .|.+++.+...             ...+......-.
T Consensus       271 ~~~~~~-Lt~-------~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~-------------~~riT~~~~~~~  329 (425)
T COG0823         271 GKNLPR-LTN-------GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ-------------VTRLTFSGGGNS  329 (425)
T ss_pred             CCccee-ccc-------CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc-------------eeEeeccCCCCc
Confidence            665333 221       1111225689999998886654 44  45556655542             222222222222


Q ss_pred             EEEeccCCCeEEEEec
Q psy15191        285 SLAASHDGTLLASACK  300 (312)
Q Consensus       285 ~~~~s~~~~~l~s~s~  300 (312)
                      .-.|+|||++|+..+.
T Consensus       330 ~p~~SpdG~~i~~~~~  345 (425)
T COG0823         330 NPVWSPDGDKIVFESS  345 (425)
T ss_pred             CccCCCCCCEEEEEec
Confidence            6689999999998874

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.83  E-value=0.00069  Score=60.44  Aligned_cols=129  Identities=19%  Similarity=0.172  Sum_probs=84.9

Q ss_pred             CCeEEE-ecccCceeeeecccCCc-eeEEEECC-----CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191        157 QGSLHL-DVTTWKQIQTLPCHQLT-ITQLAFSP-----DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII  229 (312)
Q Consensus       157 ~~~i~~-d~~~~~~~~~~~~~~~~-v~~~~~~~-----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v  229 (312)
                      ...++- |+..++++.....+... |..++-..     .....+.|-.+..+..||.|-.... .+... ..........
T Consensus       503 ~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k-~v~~~-~k~Y~~~~~F  580 (794)
T PF08553_consen  503 PNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNK-LVDSQ-SKQYSSKNNF  580 (794)
T ss_pred             CCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCc-eeecc-ccccccCCCc
Confidence            344544 99999999998866543 55543221     1234566778889999999965421 11111 1111244556


Q ss_pred             EEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        230 WGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       230 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      +|++-+.+| +||.|+.+|.||+||- .+..           .-..+.+-..+|.+|..+.||++|++.+.
T Consensus       581 s~~aTt~~G-~iavgs~~G~IRLyd~-~g~~-----------AKT~lp~lG~pI~~iDvt~DGkwilaTc~  638 (794)
T PF08553_consen  581 SCFATTEDG-YIAVGSNKGDIRLYDR-LGKR-----------AKTALPGLGDPIIGIDVTADGKWILATCK  638 (794)
T ss_pred             eEEEecCCc-eEEEEeCCCcEEeecc-cchh-----------hhhcCCCCCCCeeEEEecCCCcEEEEeec
Confidence            778777666 6889999999999983 2211           22334566899999999999999887754

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG1832|consensus

Probab=97.79  E-value=3.4e-05  Score=67.62  Aligned_cols=119  Identities=14%  Similarity=0.170  Sum_probs=91.9

Q ss_pred             ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEcc
Q psy15191        131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQ  207 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~  207 (312)
                      .+..+....++++|+-+.++|++|+..|.|++ +..++.......+|...|+-+.-+.||..+++.+.-.  -..+|++.
T Consensus      1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred             hhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence            34467788999999999999999999999999 8888888888889999999999998999888776543  36789987


Q ss_pred             CC-CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        208 SS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       208 ~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      .. .+...+.           .-.++.|+...+.-+.|.......+||+.+...
T Consensus      1176 s~~~~~Hsf~-----------ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~ 1218 (1516)
T KOG1832|consen 1176 STGGPRHSFD-----------EDKAVKFSNSLQFRALGTEADDALLYDVQTCSP 1218 (1516)
T ss_pred             cccCcccccc-----------ccceeehhhhHHHHHhcccccceEEEecccCcH
Confidence            52 2222222           234678887666556666666799999998754

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.79  E-value=0.0096  Score=46.04  Aligned_cols=186  Identities=16%  Similarity=0.186  Sum_probs=97.6

Q ss_pred             ccCCCC-CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ec--ccCc
Q psy15191         93 MRDDSK-QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DV--TTWK  168 (312)
Q Consensus        93 ~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~--~~~~  168 (312)
                      ..+.++ +.++++....+.|..++..   +..+...+..   + ..-...+++..++.++++--.++.+.+ +.  .+..
T Consensus        27 LTy~pd~~tLfaV~d~~~~i~els~~---G~vlr~i~l~---g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~   99 (248)
T PF06977_consen   27 LTYNPDTGTLFAVQDEPGEIYELSLD---GKVLRRIPLD---G-FGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS   99 (248)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETT-----EEEEEE-S---S--SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred             cEEcCCCCeEEEEECCCCEEEEEcCC---CCEEEEEeCC---C-CCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence            334443 3366667777888777764   3344444432   2 345788899888877776656777766 33  2111


Q ss_pred             --ee--eeec-----ccCCceeEEEECCCCCEEEEEecCCeEEEEEccC---CCeEEEEeccCCC-CcccceeeEEEEEc
Q psy15191        169 --QI--QTLP-----CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS---SGRLSLVACSDKT-NGVHKRIIWGVAWS  235 (312)
Q Consensus       169 --~~--~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~---~~~~~~~~~~~~~-~~~~~~~v~~~~~~  235 (312)
                        ..  ..+.     .++..+-.++|+|.++.|+.+-+..-..+|.+..   ...+......... .......+.+++++
T Consensus       100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~  179 (248)
T PF06977_consen  100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYD  179 (248)
T ss_dssp             --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEE
T ss_pred             cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEc
Confidence              11  1111     3556789999999888888887776677777764   2222211111000 11133457889999


Q ss_pred             CC-CceEEEeccCCeEEEEecCCCCCCcccccccccceeEE--eec--cC-----cceeEEEeccCCCeEEEE
Q psy15191        236 HD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK--LYG--HG-----YEIYSLAASHDGTLLASA  298 (312)
Q Consensus       236 ~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~--~~-----~~v~~~~~s~~~~~l~s~  298 (312)
                      |. +++++.+.....|..+|....             .+..  +..  |.     ...-.|+|.++|++.+++
T Consensus       180 p~t~~lliLS~es~~l~~~d~~G~-------------~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs  239 (248)
T PF06977_consen  180 PRTGHLLILSDESRLLLELDRQGR-------------VVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS  239 (248)
T ss_dssp             TTTTEEEEEETTTTEEEEE-TT---------------EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred             CCCCeEEEEECCCCeEEEECCCCC-------------EEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence            86 466777778888999984332             2222  221  11     235689999999887776

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.68  E-value=0.025  Score=47.70  Aligned_cols=32  Identities=16%  Similarity=0.098  Sum_probs=27.2

Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      .+++..++.||+++++|.-..+|.+.+....-
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf  247 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDF  247 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECcc
Confidence            45789999999999999999999998886543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.68  E-value=0.025  Score=47.69  Aligned_cols=187  Identities=13%  Similarity=0.118  Sum_probs=97.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------c---cc-----ccccCCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------Y---LP-----YHMRDDS   97 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------~---~~-----~~~~~~~   97 (312)
                      |+. .|+++.++.--.+.|.++.|..+       ..|+....||.++++|+.....      .   .+     .......
T Consensus        66 ys~-sG~ll~~i~w~~~~iv~~~wt~~-------e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~  137 (410)
T PF04841_consen   66 YSS-SGKLLSSIPWDSGRIVGMGWTDD-------EELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYK  137 (410)
T ss_pred             ECC-CCCEeEEEEECCCCEEEEEECCC-------CeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCC
Confidence            444 46666666544488999999876       4566677899999999853331      0   11     1111122


Q ss_pred             CCceEEEEeCCCcEEEEcCCCCccee--eeeeeecccCCCcc-ceeE-EEECCCCCeEEEeecCCeEEE-ecccCceeee
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLW--LETARVGEVGGNTL-GFYG-CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT  172 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~-~v~~-~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~  172 (312)
                      +|  ++.-..++.+.+.+-.......  ....+......+.. .... ..++.+....+....++.+.+ +....+.   
T Consensus       138 ~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---  212 (410)
T PF04841_consen  138 NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---  212 (410)
T ss_pred             CC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---
Confidence            33  2222334444433222111000  00000000000000 0110 234444555555555555653 3222211   


Q ss_pred             ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        173 LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                      +. ..+++..|+.||++++++.-..+|.+.+....-.+.+..+...      .......+.|.-+.
T Consensus       213 i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~------~~~~p~~~~WCG~d  271 (410)
T PF04841_consen  213 ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD------SKSPPKQMAWCGND  271 (410)
T ss_pred             cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC------cCCCCcEEEEECCC
Confidence            11 3468999999999999999999999999887655555555443      22334567776543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.64  E-value=0.02  Score=51.55  Aligned_cols=102  Identities=15%  Similarity=0.168  Sum_probs=70.5

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      ..+.|-.+..+..||++-.....+. .....+ .......|++-+.+| ++|+|+.+|.|++ |.-.-+....+++-..+
T Consensus       544 ~tflGls~n~lfriDpR~~~~k~v~-~~~k~Y-~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~p  620 (794)
T PF08553_consen  544 QTFLGLSDNSLFRIDPRLSGNKLVD-SQSKQY-SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDP  620 (794)
T ss_pred             ceEEEECCCceEEeccCCCCCceee-cccccc-ccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCC
Confidence            5677888889999999864322221 111111 234457777777776 5899999999999 43333344456677899


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKR  206 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~  206 (312)
                      |..|..+.||+++++.+ +..|.|++.
T Consensus       621 I~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  621 IIGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             eeEEEecCCCcEEEEee-cceEEEEEE
Confidence            99999999999987654 556777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.64  E-value=0.028  Score=47.01  Aligned_cols=173  Identities=17%  Similarity=0.174  Sum_probs=110.2

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec---CCeEEE-ecccCceeeeeccc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF---QGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      .++....++.|.+.|..+.+  ........      .....++++|+++.+.++..   ++.+.+ |..+..+.......
T Consensus        88 vyv~~~~~~~v~vid~~~~~--~~~~~~vG------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG  159 (381)
T COG3391          88 VYVTTGDSNTVSVIDTATNT--VLGSIPVG------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVG  159 (381)
T ss_pred             EEEecCCCCeEEEEcCcccc--eeeEeeec------cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecC
Confidence            44555556889999866532  22222221      14677999999988877665   566666 88888777775533


Q ss_pred             CCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC---CeEEE
Q psy15191        177 QLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD---GVCVV  252 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~i  252 (312)
                      ..+ ..++++|+|+.++... .++.|.+.|........ -. . ............+.++|+|.++......   +.+..
T Consensus       160 ~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~-~-~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~  235 (381)
T COG3391         160 NTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS-V-GSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLK  235 (381)
T ss_pred             CCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc-c-ccccccCCCCceEEECCCCCEEEEEeccCCCceEEE
Confidence            334 8899999999776665 68899999977654442 11 0 0001123334578999999976655443   58888


Q ss_pred             EecCCCCCCcccccccccceeEEe--e-ccCcceeEEEeccCCCeEEEEe
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKL--Y-GHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      .|...+.             +...  . +.. ....+..+|+|+.+....
T Consensus       236 id~~~~~-------------v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~  271 (381)
T COG3391         236 IDTATGN-------------VTATDLPVGSG-APRGVAVDPAGKAAYVAN  271 (381)
T ss_pred             EeCCCce-------------EEEeccccccC-CCCceeECCCCCEEEEEe
Confidence            8887763             2221  1 111 345678888888776663

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.60  E-value=0.0076  Score=39.62  Aligned_cols=100  Identities=11%  Similarity=0.094  Sum_probs=63.3

Q ss_pred             eeEEEECC---CC-CeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE
Q psy15191        139 FYGCKFGP---RG-DYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL  214 (312)
Q Consensus       139 v~~~~~~~---~~-~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  214 (312)
                      |.++++..   +| +.|++|+.|..|++ .+.-+++..+. ....|.+++-... ..|+.+..+|+|-+|+..  .++-.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRv-f~~~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlWR   76 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRV-FKGDEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLWR   76 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEE-EeCCcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceeee
Confidence            45555543   33 57999999999999 11113344444 4567888887665 568899999999999763  23333


Q ss_pred             EeccCCCCcccceeeEEEEEcC-C--C-ceEEEeccCCeEE
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSH-D--S-RYFLTISRDGVCV  251 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~-~--~-~~l~s~~~dg~i~  251 (312)
                      ++        .+..++++++.. +  | .-|++|-.+|.|-
T Consensus        77 iK--------SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   77 IK--------SKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             ec--------cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            33        222355555543 2  2 3688888888764

>KOG4649|consensus

Probab=97.60  E-value=0.014  Score=44.47  Aligned_cols=103  Identities=10%  Similarity=-0.030  Sum_probs=71.5

Q ss_pred             CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccc
Q psy15191        148 GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHK  226 (312)
Q Consensus       148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~  226 (312)
                      ..+++.|+..+.+.- |..++++.-... -..++.+-+.- -|++++.|...|.+++.+..++.+...+.......    
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk----   96 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK----   96 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc----
Confidence            345666777766655 777777665443 23334333322 47789999999999999999997776665432211    


Q ss_pred             eeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        227 RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       227 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                         ......+++.++..|+.|+..+..|..+..
T Consensus        97 ---~~a~~d~~~glIycgshd~~~yalD~~~~~  126 (354)
T KOG4649|consen   97 ---VRAQCDFDGGLIYCGSHDGNFYALDPKTYG  126 (354)
T ss_pred             ---cceEEcCCCceEEEecCCCcEEEecccccc
Confidence               124567799999999999999999987764

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.57  E-value=0.018  Score=48.04  Aligned_cols=205  Identities=9%  Similarity=0.006  Sum_probs=102.7

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------------ccccc--cCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------------LPYHM--RDD   96 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------------~~~~~--~~~   96 (312)
                      .+...++...++|++++.+.-       -++|.|..+|.+.|.|++.....                   .+.|.  ...
T Consensus        77 ~P~~l~~~~~g~vtal~~S~i-------GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~  149 (395)
T PF08596_consen   77 LPLTLLDAKQGPVTALKNSDI-------GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLG  149 (395)
T ss_dssp             EEEEEE---S-SEEEEEE-BT-------SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-T
T ss_pred             CchhheeccCCcEeEEecCCC-------cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecC
Confidence            344556666899999999755       58999999999999999765441                   11111  112


Q ss_pred             C---CCceEEEEeCCCcEEEEcCCC-CcceeeeeeeecccCCCccceeEEE-ECCC-C-------------------CeE
Q psy15191         97 S---KQLHLLSCSMDKSIIVWAPDP-TTGLWLETARVGEVGGNTLGFYGCK-FGPR-G-------------------DYI  151 (312)
Q Consensus        97 ~---~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~-------------------~~l  151 (312)
                      .   ....+++|...|.+.+|.+.. ..+.+........ ..+..++..+. ++.+ |                   +.+
T Consensus       150 ~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~-~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~  228 (395)
T PF08596_consen  150 GDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGAT-TNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGY  228 (395)
T ss_dssp             TSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE---SS----EEEEEETTT--B-B-BHHHHHGGGGT----EE
T ss_pred             CCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeecc-ccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcE
Confidence            2   234788999999999998752 2222222111111 23344444443 3221 1                   123


Q ss_pred             EEeecCCeEEE-ecccCceeeeecccCCceeEEEEC-----CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS-----PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       152 ~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                      ++...+..+++ ...+.+..............+.+-     ..+..|++-..+|.|++|.+...+.+.........   .
T Consensus       229 vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~---d  305 (395)
T PF08596_consen  229 VVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPL---D  305 (395)
T ss_dssp             EEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS------
T ss_pred             EEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcc---c
Confidence            44444556666 333333333222121222334442     35667888889999999999998888777764221   2


Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      ...+....++++|..++-.+.. .+.++.
T Consensus       306 ~~~~~~ssis~~Gdi~~~~gps-E~~l~s  333 (395)
T PF08596_consen  306 SRRLSSSSISRNGDIFYWTGPS-EIQLFS  333 (395)
T ss_dssp             HHHHTT-EE-TTS-EEEE-SSS-EEEEEE
T ss_pred             cccccccEECCCCCEEEEeCcc-cEEEEE
Confidence            2334456778899977766543 344443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.51  E-value=0.037  Score=45.15  Aligned_cols=126  Identities=10%  Similarity=0.044  Sum_probs=73.4

Q ss_pred             CeEEE-ecccC-----cee--eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCCCCccccee
Q psy15191        158 GSLHL-DVTTW-----KQI--QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       158 ~~i~~-d~~~~-----~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~  228 (312)
                      |.+.+ ++.+.     ++.  ... ...++|++++-- ++ +|+.+ .++.|.+|++...+ ........      ....
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~-~lv~~-~g~~l~v~~l~~~~~l~~~~~~~------~~~~  131 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NG-RLVVA-VGNKLYVYDLDNSKTLLKKAFYD------SPFY  131 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TT-EEEEE-ETTEEEEEEEETTSSEEEEEEE-------BSSS
T ss_pred             cEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CC-EEEEe-ecCEEEEEEccCcccchhhheec------ceEE
Confidence            77877 54442     222  222 357889888765 44 44444 46899999999877 33322211      2224


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee--ccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY--GHGYEIYSLAASHDGTLLASACKATKPEH  306 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~~~~d  306 (312)
                      +.++..  .+.+++.|.....+.++.+.....           .+..+.  .....++++.|-++++.++.+     +.+
T Consensus       132 i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~-----------~l~~va~d~~~~~v~~~~~l~d~~~~i~~-----D~~  193 (321)
T PF03178_consen  132 ITSLSV--FKNYILVGDAMKSVSLLRYDEENN-----------KLILVARDYQPRWVTAAEFLVDEDTIIVG-----DKD  193 (321)
T ss_dssp             EEEEEE--ETTEEEEEESSSSEEEEEEETTTE------------EEEEEEESS-BEEEEEEEE-SSSEEEEE-----ETT
T ss_pred             EEEEec--cccEEEEEEcccCEEEEEEEccCC-----------EEEEEEecCCCccEEEEEEecCCcEEEEE-----cCC
Confidence            555554  466888888877788886654321           122222  235568899998777788888     455


Q ss_pred             ceEEe
Q psy15191        307 AAIII  311 (312)
Q Consensus       307 g~i~i  311 (312)
                      |.|.+
T Consensus       194 gnl~~  198 (321)
T PF03178_consen  194 GNLFV  198 (321)
T ss_dssp             SEEEE
T ss_pred             CeEEE
Confidence            55765

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.50  E-value=0.028  Score=43.71  Aligned_cols=127  Identities=12%  Similarity=0.152  Sum_probs=88.8

Q ss_pred             cCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        132 VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       132 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      ..+....+.++.|+|+.+.|++......-.+ =..+++++..++ ..-.....+.+..++++.++--.++.+.++.+...
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            4455666999999999999998887776666 344577777765 11233456788888888888778899999988766


Q ss_pred             CeEEEEec---cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        210 GRLSLVAC---SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       210 ~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ........   +...........-.++|+|..+.|..+-+..-+.||.+...
T Consensus       161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~  212 (316)
T COG3204         161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQS  212 (316)
T ss_pred             ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecC
Confidence            44333222   11111112456778999999999999988888888877644

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.49  E-value=0.035  Score=44.57  Aligned_cols=144  Identities=19%  Similarity=0.109  Sum_probs=87.2

Q ss_pred             cceeEEEECCCCCeEEEeec-----------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CCeEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGF-----------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DRRWGL  203 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~-----------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~  203 (312)
                      ...+.+...|+|.+.+....           -|.++. |. ....++....+-..-+.|+||||++.|+.+-. .+.|.-
T Consensus       111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r  189 (307)
T COG3386         111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHR  189 (307)
T ss_pred             CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEE
Confidence            45677888899887665433           122333 33 23344444444555688999999988877754 478888


Q ss_pred             EEccC-----CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-eEEEEecCCCCCCcccccccccceeEEee
Q psy15191        204 YKRQS-----SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-VCVVWGLGEPPTEEDLVQNTLWPEVQKLY  277 (312)
Q Consensus       204 wd~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  277 (312)
                      |++..     ......+....     ..+..-.++...+|.+.+++..+| .|.+|+.. +.            .+..+.
T Consensus       190 ~~~d~~~g~~~~~~~~~~~~~-----~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~------------l~~~i~  251 (307)
T COG3386         190 YDLDPATGPIGGRRGFVDFDE-----EPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GK------------LLGEIK  251 (307)
T ss_pred             EecCcccCccCCcceEEEccC-----CCCCCCceEEeCCCCEEEecccCCceEEEECCC-Cc------------EEEEEE
Confidence            87763     11110111100     234455677888888886555554 89999876 32            566666


Q ss_pred             ccCcceeEEEec-cCCCeEEEEe
Q psy15191        278 GHGYEIYSLAAS-HDGTLLASAC  299 (312)
Q Consensus       278 ~~~~~v~~~~~s-~~~~~l~s~s  299 (312)
                      -+...+++++|- |+.+.|...+
T Consensus       252 lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         252 LPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CCCCCCccceEeCCCcCEEEEEe
Confidence            666778888884 4455444443

>KOG4441|consensus

Probab=97.48  E-value=0.026  Score=49.64  Aligned_cols=212  Identities=13%  Similarity=0.139  Sum_probs=111.6

Q ss_pred             CceEEEecCCC------cEEEeeecCCcccccccccC--------CCCCceEEEEeCC------CcEEEEcCCCCcceee
Q psy15191         65 HKDLVSCSLDK------TAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD------KSIIVWAPDPTTGLWL  124 (312)
Q Consensus        65 ~~~l~s~~~dg------~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~  124 (312)
                      +.+++.||.++      .+..+|..++........+.        .-++...++|+.|      ..+..||..+.+  +.
T Consensus       285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~--W~  362 (571)
T KOG4441|consen  285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQ--WT  362 (571)
T ss_pred             CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCc--ee
Confidence            56777887773      57788887775422211111        1234577888888      356678887743  44


Q ss_pred             eeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ec-------ccCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191        125 ETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DV-------TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       125 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ...+   +..........  .-+|...++|+.||.-.+ .+       ..|.................+  +|...++|+
T Consensus       363 ~~a~---M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~--~g~iYi~GG  435 (571)
T KOG4441|consen  363 PVAP---MNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVL--GGKLYIIGG  435 (571)
T ss_pred             ccCC---ccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEE--CCEEEEEcC
Confidence            3222   11111111111  236888899999987665 22       344444433322222222333  677788888


Q ss_pred             cCC------eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCCCCCcccc
Q psy15191        197 RDR------RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       197 ~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~  265 (312)
                      .++      ++..||..+..-....+....     .... .++. -++.+.+.|+.|+     +|..||..+.       
T Consensus       436 ~~~~~~~l~sve~YDP~t~~W~~~~~M~~~-----R~~~-g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~-------  501 (571)
T KOG4441|consen  436 GDGSSNCLNSVECYDPETNTWTLIAPMNTR-----RSGF-GVAV-LNGKIYVVGGFDGTSALSSVERYDPETN-------  501 (571)
T ss_pred             cCCCccccceEEEEcCCCCceeecCCcccc-----cccc-eEEE-ECCEEEEECCccCCCccceEEEEcCCCC-------
Confidence            654      467788776543322221111     1111 1222 2678888888776     3666776554       


Q ss_pred             cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc
Q psy15191        266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP  304 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~  304 (312)
                         .|..+.........+..+  .-++...+.|+.|+..
T Consensus       502 ---~W~~v~~m~~~rs~~g~~--~~~~~ly~vGG~~~~~  535 (571)
T KOG4441|consen  502 ---QWTMVAPMTSPRSAVGVV--VLGGKLYAVGGFDGNN  535 (571)
T ss_pred             ---ceeEcccCccccccccEE--EECCEEEEEecccCcc
Confidence               344443333333332222  2366788888777653

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=97.45  E-value=0.018  Score=47.83  Aligned_cols=147  Identities=15%  Similarity=0.150  Sum_probs=76.2

Q ss_pred             ceeEEEECCCCCeEEEee-----------cCC-eEEE--ecc-cCc--eeeeecccCCceeEEEECCCCCEEEEEecCCe
Q psy15191        138 GFYGCKFGPRGDYIIAHG-----------FQG-SLHL--DVT-TWK--QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR  200 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~-----------~~~-~i~~--d~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  200 (312)
                      ....|+|.++|+++++-.           ..+ .|.+  |.. ...  ....+.........|++.+++ .++ +.....
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~i   92 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPDI   92 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCeE
Confidence            456789999998776642           122 5554  322 122  222333233456889999888 444 444443


Q ss_pred             EEEEEccCC-----CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-------------------CeEEEEecC
Q psy15191        201 WGLYKRQSS-----GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-------------------GVCVVWGLG  256 (312)
Q Consensus       201 i~~wd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------------g~i~iwd~~  256 (312)
                      +++.|....     +....+.........+......++|.|||.+.++-+..                   |.|.-++..
T Consensus        93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pd  172 (367)
T TIGR02604        93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPD  172 (367)
T ss_pred             EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecC
Confidence            344454321     22222232211101123446789999999877655522                   223333322


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ..             .+..+...-.....++|+|+|+++++-.
T Consensus       173 g~-------------~~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       173 GG-------------KLRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             CC-------------eEEEEecCcCCCccceECCCCCEEEEcc
Confidence            21             1222222233457899999999887654

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG2395|consensus

Probab=97.39  E-value=0.013  Score=49.09  Aligned_cols=138  Identities=18%  Similarity=0.197  Sum_probs=88.0

Q ss_pred             CCCCeEEE-eec-CCeEEEecccCceeeeecccCCceeEEEECCCCC-------EEEEEecCCeEEEEEccCCCe--EEE
Q psy15191        146 PRGDYIIA-HGF-QGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDT-------HLVSVSRDRRWGLYKRQSSGR--LSL  214 (312)
Q Consensus       146 ~~~~~l~~-~~~-~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~~i~~wd~~~~~~--~~~  214 (312)
                      .+.+.|+. +.. ++.-++|++.++++....-+.. |+-+.+.|+.+       .-+.|-.|..|.-||++-...  +..
T Consensus       343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~  421 (644)
T KOG2395|consen  343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV  421 (644)
T ss_pred             cccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence            34444443 333 3444449999999988875554 77777777543       123466788899999985433  111


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                      ....   .........|.+-..+| ++|.||.+|.|++||- .+..           .-..+.+-..+|..+..+.+|++
T Consensus       422 ~q~k---qy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~-----------AKTAlPgLG~~I~hVdvtadGKw  485 (644)
T KOG2395|consen  422 VQSK---QYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRR-----------AKTALPGLGDAIKHVDVTADGKW  485 (644)
T ss_pred             eecc---ccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhh-----------hhhcccccCCceeeEEeeccCcE
Confidence            1111   11123334455555444 7899999999999986 3211           22345677889999999999998


Q ss_pred             EEEEec
Q psy15191        295 LASACK  300 (312)
Q Consensus       295 l~s~s~  300 (312)
                      |+..+.
T Consensus       486 il~Tc~  491 (644)
T KOG2395|consen  486 ILATCK  491 (644)
T ss_pred             EEEecc
Confidence            887754

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.37  E-value=0.05  Score=43.48  Aligned_cols=154  Identities=10%  Similarity=0.110  Sum_probs=78.9

Q ss_pred             CccceeEEEECCCCCeEEEeecCCeEEE--ecc--cCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG  210 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  210 (312)
                      ....+..+..+++|++++++. .|.+..  |.-  .|......  ....|..|.|.|++...+.+ ..|.|++=+..  .
T Consensus       143 ~~gs~~~~~r~~dG~~vavs~-~G~~~~s~~~G~~~w~~~~r~--~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~--~  216 (302)
T PF14870_consen  143 TSGSINDITRSSDGRYVAVSS-RGNFYSSWDPGQTTWQPHNRN--SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP--D  216 (302)
T ss_dssp             ----EEEEEE-TTS-EEEEET-TSSEEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T--T
T ss_pred             CcceeEeEEECCCCcEEEEEC-cccEEEEecCCCccceEEccC--ccceehhceecCCCCEEEEe-CCcEEEEccCC--C
Confidence            346688888899999877764 455544  322  25444333  45789999999998766644 88988888722  1


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  290 (312)
                      .......+..........+..++|.+++...|+|+... + +.....         .+.|+.......-...++.+.|.+
T Consensus       217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~-l-~~S~Dg---------GktW~~~~~~~~~~~n~~~i~f~~  285 (302)
T PF14870_consen  217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGT-L-LVSTDG---------GKTWQKDRVGENVPSNLYRIVFVN  285 (302)
T ss_dssp             EEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT--E-EEESST---------TSS-EE-GGGTTSSS---EEEEEE
T ss_pred             CccccccccCCcccCceeeEEEEecCCCCEEEEeCCcc-E-EEeCCC---------CccceECccccCCCCceEEEEEcC
Confidence            22222221111111344588999999988888776553 3 222222         445655544444566788999987


Q ss_pred             CCCeEEEEecCCCcccceEEe
Q psy15191        291 DGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       291 ~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      ..+-++.|      ++|.|.-
T Consensus       286 ~~~gf~lG------~~G~ll~  300 (302)
T PF14870_consen  286 PDKGFVLG------QDGVLLR  300 (302)
T ss_dssp             TTEEEEE-------STTEEEE
T ss_pred             CCceEEEC------CCcEEEE
Confidence            76666666      4555643

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.36  E-value=0.046  Score=42.81  Aligned_cols=153  Identities=15%  Similarity=0.024  Sum_probs=89.7

Q ss_pred             ceeEEEECCCCCeEEEee--cC-CeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEE-ccCCCe-E
Q psy15191        138 GFYGCKFGPRGDYIIAHG--FQ-GSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK-RQSSGR-L  212 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~--~~-~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd-~~~~~~-~  212 (312)
                      .+.+.+++++++.++...  .+ ..+.+-..........  ....+..-.|++++...+....+...+++. ...... .
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            578899999999877765  33 3444411111111111  223678889999987766666666666664 222222 1


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEec---cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                      ..+....     ....|..+.+||||..+|...   .++.|.+=-+........   ..+-............+.+++|.
T Consensus       103 ~~v~~~~-----~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~---~~l~~~~~~~~~~~~~v~~v~W~  174 (253)
T PF10647_consen  103 VEVDWPG-----LRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVP---RRLTGPRRVAPPLLSDVTDVAWS  174 (253)
T ss_pred             EEecccc-----cCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCc---ceeccceEecccccCcceeeeec
Confidence            1222110     111799999999999877665   357788876654433200   01111233333445689999999


Q ss_pred             cCCCeEEEEec
Q psy15191        290 HDGTLLASACK  300 (312)
Q Consensus       290 ~~~~~l~s~s~  300 (312)
                      +++.+++.+..
T Consensus       175 ~~~~L~V~~~~  185 (253)
T PF10647_consen  175 DDSTLVVLGRS  185 (253)
T ss_pred             CCCEEEEEeCC
Confidence            99988877754

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.33  E-value=0.019  Score=37.84  Aligned_cols=65  Identities=15%  Similarity=0.153  Sum_probs=47.5

Q ss_pred             eeEEEECC---CC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        180 ITQLAFSP---DD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       180 v~~~~~~~---~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      |++|++..   || +.|++|+.|..|++|+-.  ..+..+.        ....|+.++-... ..++.+-.+|+|-+|+-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~--------e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT--------ETDKVTSLCSLGG-GRFAYALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe--------cccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence            55666654   32 589999999999999864  3444444        4455777776655 66889999999999975

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.33  E-value=0.078  Score=45.00  Aligned_cols=173  Identities=10%  Similarity=0.123  Sum_probs=83.2

Q ss_pred             EEEEEEecCcCcCCCCceEEEecCCCcEEEe-eecCCcccccccccCCCC----CceEEEEeCCCcEEEEcCCCCcceee
Q psy15191         50 VMAVKWVLNTSLDPEHKDLVSCSLDKTAILW-KYVSEGNYLPYHMRDDSK----QLHLLSCSMDKSIIVWAPDPTTGLWL  124 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw-~~~~~~~~~~~~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~  124 (312)
                      -....|.+.      ++ +|+-...++|.|+ ++..... .....+...+    |..|...+. +.|.+||+.+.+  .+
T Consensus        71 g~~~vw~~~------n~-yAv~~~~~~I~I~kn~~~~~~-k~i~~~~~~~~If~G~LL~~~~~-~~i~~yDw~~~~--~i  139 (443)
T PF04053_consen   71 GLSFVWSSR------NR-YAVLESSSTIKIYKNFKNEVV-KSIKLPFSVEKIFGGNLLGVKSS-DFICFYDWETGK--LI  139 (443)
T ss_dssp             -SEEEE-TS------SE-EEEE-TTS-EEEEETTEE-TT------SS-EEEEE-SSSEEEEET-TEEEEE-TTT----EE
T ss_pred             eeEEEEecC------cc-EEEEECCCeEEEEEcCccccc-eEEcCCcccceEEcCcEEEEECC-CCEEEEEhhHcc--ee
Confidence            345667776      44 6666668889996 4433331 1111111111    445555544 489999999843  33


Q ss_pred             eeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecc------------cCceeeeecccCCceeEEEECCCCC
Q psy15191        125 ETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVT------------TWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       125 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~------------~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      ....       -.+|..+.|++++++++..+.+....+  +..            .......   -...|.+.+|..+  
T Consensus       140 ~~i~-------v~~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E---~~~~IkSg~W~~d--  207 (443)
T PF04053_consen  140 RRID-------VSAVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHE---ISERIKSGCWVED--  207 (443)
T ss_dssp             EEES-------S-E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEE---E-S--SEEEEETT--
T ss_pred             eEEe-------cCCCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEEEEE---ecceeEEEEEEcC--
Confidence            3332       123788999999999999988876665  333            2222222   2467888899765  


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      .|+-.+.. .++.  +..+. ...+..       ...++.=+...|..+.+.....|+.|..+.+.
T Consensus       208 ~fiYtT~~-~lkY--l~~Ge-~~~i~~-------ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  208 CFIYTTSN-HLKY--LVNGE-TGIIAH-------LDKPLYLLGYLPKENRLYLIDRDGNVISYELD  262 (443)
T ss_dssp             EEEEE-TT-EEEE--EETTE-EEEEEE--------SS--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred             EEEEEcCC-eEEE--EEcCC-cceEEE-------cCCceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence            44444444 6665  33222 222222       23345556666766677777777777777653

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.32  E-value=0.1  Score=46.07  Aligned_cols=151  Identities=14%  Similarity=0.081  Sum_probs=82.4

Q ss_pred             cceeEEEECCCCCeEEEee------cCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-CeEEEEEc
Q psy15191        137 LGFYGCKFGPRGDYIIAHG------FQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-RRWGLYKR  206 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~------~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~wd~  206 (312)
                      ..+.+.+++|+|+.++...      .+.  .+.+ +.. ... ..+. .......-.|+|||..+++.... ..+++.+.
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt-~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~  426 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVL-EGHSLTRPSWSLDADAVWVVVDGNTVVRVIRD  426 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeee-cCCCCCCceECCCCCceEEEecCcceEEEecc
Confidence            4577889999999887655      233  3444 321 111 1121 12237788999999988887543 23344433


Q ss_pred             cCCCeEEEEeccCCCCc-ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc-ccccccccceeEEe-eccCcce
Q psy15191        207 QSSGRLSLVACSDKTNG-VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE-DLVQNTLWPEVQKL-YGHGYEI  283 (312)
Q Consensus       207 ~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~v  283 (312)
                      .....+..+........ .....|..+.|||||..++... +|.|++=-+....... .+.      ....+ .+-...+
T Consensus       427 ~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~------~~~~l~~~l~~~~  499 (591)
T PRK13616        427 PATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALT------NPREVGPGLGDTA  499 (591)
T ss_pred             CCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeec------ccEEeecccCCcc
Confidence            22223332221110000 1345699999999999888765 5778774333221111 110      11222 2233446


Q ss_pred             eEEEeccCCCeEEE
Q psy15191        284 YSLAASHDGTLLAS  297 (312)
Q Consensus       284 ~~~~~s~~~~~l~s  297 (312)
                      .+++|..++.+++.
T Consensus       500 ~~l~W~~~~~L~V~  513 (591)
T PRK13616        500 VSLDWRTGDSLVVG  513 (591)
T ss_pred             ccceEecCCEEEEE
Confidence            88999999986533

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.22  E-value=0.077  Score=42.67  Aligned_cols=258  Identities=16%  Similarity=0.048  Sum_probs=119.4

Q ss_pred             EEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEEeeecCCcccccccccC----
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAILWKYVSEGNYLPYHMRD----   95 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~vw~~~~~~~~~~~~~~~----   95 (312)
                      ...|.++++.+-.+..--  .-.+..+|+      ++.+.+++          +.-.|.+||..+-....-.-+|.    
T Consensus        20 ~viD~d~~k~lGmi~~g~--~~~~~~spd------gk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~   91 (342)
T PF06433_consen   20 YVIDADSGKLLGMIDTGF--LGNVALSPD------GKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRA   91 (342)
T ss_dssp             EEEETTTTEEEEEEEEES--SEEEEE-TT------SSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B-
T ss_pred             EEEECCCCcEEEEeeccc--CCceeECCC------CCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchh
Confidence            346778888777776422  223455676      88877653          23358999998865521111111    


Q ss_pred             --CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecc-cCcee
Q psy15191         96 --DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVT-TWKQI  170 (312)
Q Consensus        96 --~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~-~~~~~  170 (312)
                        .+....+.....++.+.++++.......+.......+...-...-|.-.-|. .+.+.+-+.||.+.- .+. .++..
T Consensus        92 ~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~  171 (342)
T PF06433_consen   92 QVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEA  171 (342)
T ss_dssp             -BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEE
T ss_pred             eecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEe
Confidence              1122234444445556666654432222111110000000000001111121 233556666666444 332 23332


Q ss_pred             eeec----ccCC-ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC-----CcccceeeEEEEEcCCCce
Q psy15191        171 QTLP----CHQL-TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT-----NGVHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       171 ~~~~----~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~  240 (312)
                      ....    .-.. .+..-++...+..++-.+.+|.|+--|+........-.-....     ..-..+.-.-+++++..+.
T Consensus       172 ~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~r  251 (342)
T PF06433_consen  172 QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGR  251 (342)
T ss_dssp             EEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTE
T ss_pred             EeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCe
Confidence            2111    1112 2223344445555555789999999998876543322211100     0001222334677765554


Q ss_pred             EEEecc---CC-------eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceE
Q psy15191        241 FLTISR---DG-------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAI  309 (312)
Q Consensus       241 l~s~~~---dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i  309 (312)
                      |+..-.   ++       .|.++|+.+..            .+..+.. ..++.+|+.+.+.+ +|.+.+    ..++.|
T Consensus       252 lyvLMh~g~~gsHKdpgteVWv~D~~t~k------------rv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~----~~~~~l  314 (342)
T PF06433_consen  252 LYVLMHQGGEGSHKDPGTEVWVYDLKTHK------------RVARIPL-EHPIDSIAVSQDDKPLLYALS----AGDGTL  314 (342)
T ss_dssp             EEEEEEE--TT-TTS-EEEEEEEETTTTE------------EEEEEEE-EEEESEEEEESSSS-EEEEEE----TTTTEE
T ss_pred             EEEEecCCCCCCccCCceEEEEEECCCCe------------EEEEEeC-CCccceEEEccCCCcEEEEEc----CCCCeE
Confidence            443322   11       57777877763            5666553 34678999998876 554443    334556


Q ss_pred             EeC
Q psy15191        310 IIW  312 (312)
Q Consensus       310 ~iW  312 (312)
                      .+|
T Consensus       315 ~v~  317 (342)
T PF06433_consen  315 DVY  317 (342)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.16  E-value=0.076  Score=41.44  Aligned_cols=156  Identities=13%  Similarity=0.166  Sum_probs=97.5

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccccc---------CCCCCceEEEEeCCCcEEEE
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMR---------DDSKQLHLLSCSMDKSIIVW  114 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~---------~~~~~~~l~~~~~d~~i~i~  114 (312)
                      .+-...|.++.|+|+      .+.|++......-.|+=...++.+...-..         +-.++.+.++--.++.+.++
T Consensus        82 ~g~~~nvS~LTynp~------~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~  155 (316)
T COG3204          82 LGETANVSSLTYNPD------TRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLF  155 (316)
T ss_pred             ccccccccceeeCCC------cceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEE
Confidence            344456999999998      677777776666666655556553222111         12344566666678888888


Q ss_pred             cCCCCcceeee---eeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeee---c-----cc-------
Q psy15191        115 APDPTTGLWLE---TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTL---P-----CH-------  176 (312)
Q Consensus       115 d~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~---~-----~~-------  176 (312)
                      .+.........   .+++......+.....++|.|....|+.+-+..-+.+    ++.....   .     .+       
T Consensus       156 ~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I----~~~~~~~~~l~~~~~~~~~~~~~~f  231 (316)
T COG3204         156 TVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGI----FEVTQSPSSLSVHASLDPTADRDLF  231 (316)
T ss_pred             EEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEE----EEEecCCcccccccccCcccccceE
Confidence            77765333221   2333344344677899999999998888887777776    2211111   0     11       


Q ss_pred             CCceeEEEECC-CCCEEEEEecCCeEEEEEccCC
Q psy15191        177 QLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       177 ~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      -..|.++.|++ .+..|+.+.+++.+.-.|....
T Consensus       232 ~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~  265 (316)
T COG3204         232 VLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE  265 (316)
T ss_pred             eeccccceecCCCCcEEEEecCCceEEEEecCCC
Confidence            23467788887 5566777778888888887643

>KOG2079|consensus

Probab=97.15  E-value=0.0044  Score=56.06  Aligned_cols=102  Identities=19%  Similarity=0.155  Sum_probs=72.2

Q ss_pred             CCCeEEEeecCCeEEE-ecccCcee--eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        147 RGDYIIAHGFQGSLHL-DVTTWKQI--QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       147 ~~~~l~~~~~~~~i~~-d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      .+..++.|+..|.+.. |.. |++.  ..-....++|++++|+.+|..++.|-.+|.|.+||+...+.++.+.....   
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~-~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~a---  173 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMT-GNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGA---  173 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhh-cccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCC---
Confidence            4556888888888888 333 3222  11123567899999999999999999999999999999888887776332   


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                       ....|..+.+..++..++++...|.  +|.+
T Consensus       174 -p~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  174 -PVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             -ccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence             2223444455556667888877776  5544

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.15  E-value=0.0017  Score=35.57  Aligned_cols=31  Identities=16%  Similarity=0.265  Sum_probs=28.2

Q ss_pred             cceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      ....|..++|+|...+||.++.+|.|.+|.+
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl   40 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL   40 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence            3456889999999999999999999999988

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.13  E-value=0.0025  Score=34.92  Aligned_cols=32  Identities=9%  Similarity=0.162  Sum_probs=28.9

Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                      ....|..++|+|...+||.++.+|.|.+|.+.
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            34579999999999999999999999999984

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.12  E-value=0.021  Score=50.32  Aligned_cols=109  Identities=17%  Similarity=0.033  Sum_probs=59.0

Q ss_pred             CCceeEEEECCCCCEEEEEe------cCC--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        177 QLTITQLAFSPDDTHLVSVS------RDR--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~------~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      ...+.+.+++|+|+.++...      .|+  .|.+++.. ... ..+..        ....+.-.|+|+|+.|++.....
T Consensus       349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~--------g~~~t~PsWspDG~~lw~v~dg~  418 (591)
T PRK13616        349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE--------GHSLTRPSWSLDADAVWVVVDGN  418 (591)
T ss_pred             ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec--------CCCCCCceECCCCCceEEEecCc
Confidence            34678899999999887765      243  45555542 222 22221        11256789999998887765432


Q ss_pred             -eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        249 -VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       249 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                       .+++.+-..............  ....  ...+.|.++.|||||..|+...
T Consensus       419 ~~~~v~~~~~~gql~~~~vd~g--e~~~--~~~g~Issl~wSpDG~RiA~i~  466 (591)
T PRK13616        419 TVVRVIRDPATGQLARTPVDAS--AVAS--RVPGPISELQLSRDGVRAAMII  466 (591)
T ss_pred             ceEEEeccCCCceEEEEeccCc--hhhh--ccCCCcCeEEECCCCCEEEEEE
Confidence             223322211100000000000  0111  2245799999999999888764

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.10  E-value=0.11  Score=42.31  Aligned_cols=136  Identities=15%  Similarity=0.101  Sum_probs=78.5

Q ss_pred             CcEEEEcCCCC-cc-eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc-eeeeec-ccCCceeEE
Q psy15191        109 KSIIVWAPDPT-TG-LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLP-CHQLTITQL  183 (312)
Q Consensus       109 ~~i~i~d~~~~-~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~-~~~~~v~~~  183 (312)
                      |.|.++++... .. ..+.....   ....++|++++-- .+ .|+++ .++.+.+ ++...+ +..... .....+.++
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~---~~~~g~V~ai~~~-~~-~lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl  135 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHS---TEVKGPVTAICSF-NG-RLVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSL  135 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEE---EEESS-EEEEEEE-TT-EEEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEE
T ss_pred             cEEEEEEEEcccccceEEEEEEE---EeecCcceEhhhh-CC-EEEEe-ecCEEEEEEccCcccchhhheecceEEEEEE
Confidence            77888877763 10 01111111   1235668877765 33 34443 3466777 555444 333322 123355555


Q ss_pred             EECCCCCEEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        184 AFSPDDTHLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ..  .+++++.|.....+.++..+.... +..+....     ....++++.+-++++.++.+..+|.+.++....
T Consensus       136 ~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~-----~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~  203 (321)
T PF03178_consen  136 SV--FKNYILVGDAMKSVSLLRYDEENNKLILVARDY-----QPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP  203 (321)
T ss_dssp             EE--ETTEEEEEESSSSEEEEEEETTTE-EEEEEEES-----S-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred             ec--cccEEEEEEcccCEEEEEEEccCCEEEEEEecC-----CCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence            55  466999999888898886664332 33333221     455688888886767899999999999998864

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.09  E-value=0.033  Score=47.27  Aligned_cols=109  Identities=20%  Similarity=0.260  Sum_probs=65.8

Q ss_pred             ceeEEEECCCCCEEEEE-ecCC----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC------
Q psy15191        179 TITQLAFSPDDTHLVSV-SRDR----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD------  247 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~-~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------  247 (312)
                      .+..+.++||+++++.+ +..|    .++++|+.+++.+...-        .......+.|.++++.|+....+      
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i--------~~~~~~~~~W~~d~~~~~y~~~~~~~~~~  196 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI--------ENPKFSSVSWSDDGKGFFYTRFDEDQRTS  196 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE--------EEEESEEEEECTTSSEEEEEECSTTTSS-
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc--------cccccceEEEeCCCCEEEEEEeCcccccc
Confidence            34568899999988865 3334    49999999885543221        11112239999998877655432      


Q ss_pred             -----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        248 -----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       248 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                           ..|+.|.+.++.....        .+..-..+......+..++|+++|+..+..+.
T Consensus       197 ~~~~~~~v~~~~~gt~~~~d~--------lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~  249 (414)
T PF02897_consen  197 DSGYPRQVYRHKLGTPQSEDE--------LVFEEPDEPFWFVSVSRSKDGRYLFISSSSGT  249 (414)
T ss_dssp             CCGCCEEEEEEETTS-GGG-E--------EEEC-TTCTTSEEEEEE-TTSSEEEEEEESSS
T ss_pred             cCCCCcEEEEEECCCChHhCe--------eEEeecCCCcEEEEEEecCcccEEEEEEEccc
Confidence                 2477888776633210        22222222222567889999999887766554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.07  E-value=0.18  Score=43.88  Aligned_cols=142  Identities=14%  Similarity=0.064  Sum_probs=77.0

Q ss_pred             cEEEEcCCCCcceeeeeeeeccc---CCCccce-eEEEECCCCC---eEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEV---GGNTLGF-YGCKFGPRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~---~~~~~~v-~~~~~~~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~  181 (312)
                      .|.-+|.++++..+.........   .....++ ..+. .-++.   .+++++.+|.+.- |.++++.+-.....   ..
T Consensus       257 ~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~  332 (488)
T cd00216         257 SIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQ  332 (488)
T ss_pred             eEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---cc
Confidence            68899999987777654321110   0111111 1111 11333   5777788888776 88888877654411   11


Q ss_pred             EEEECCCCCEEEEE------------------ecCCeEEEEEccCCCeEEEEeccCCCCcc-cceee--EEEEEcCCCce
Q psy15191        182 QLAFSPDDTHLVSV------------------SRDRRWGLYKRQSSGRLSLVACSDKTNGV-HKRII--WGVAWSHDSRY  240 (312)
Q Consensus       182 ~~~~~~~~~~l~~~------------------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~v--~~~~~~~~~~~  240 (312)
                      .++.+|  ..++.+                  ..+|.+.-.|+.+++.+-........... ...+.  ..++.  .+.+
T Consensus       333 ~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~  408 (488)
T cd00216         333 PMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNL  408 (488)
T ss_pred             ccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCe
Confidence            233444  223322                  23577888888888766555432100000 00011  11222  4567


Q ss_pred             EEEeccCCeEEEEecCCCC
Q psy15191        241 FLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       241 l~s~~~dg~i~iwd~~~~~  259 (312)
                      |+.++.||.|+.+|..++.
T Consensus       409 v~~g~~dG~l~ald~~tG~  427 (488)
T cd00216         409 VFAGAADGYFRAFDATTGK  427 (488)
T ss_pred             EEEECCCCeEEEEECCCCc
Confidence            8888999999999998884

The alignment model contains an 8-bladed beta-propeller.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.02  E-value=0.15  Score=42.26  Aligned_cols=144  Identities=19%  Similarity=0.167  Sum_probs=72.5

Q ss_pred             ccceeEEEECCCCCeEEEe--ecCC-eEEE---ecccCceeeeec-ccCCc---eeEEEEC-CCCC-EEEEEecCCeEE-
Q psy15191        136 TLGFYGCKFGPRGDYIIAH--GFQG-SLHL---DVTTWKQIQTLP-CHQLT---ITQLAFS-PDDT-HLVSVSRDRRWG-  202 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~--~~~~-~i~~---d~~~~~~~~~~~-~~~~~---v~~~~~~-~~~~-~l~~~~~d~~i~-  202 (312)
                      ...+..+.|.++++.++..  ..+. .+.+   |..++....... .....   -....+. +++. ++.....+|--+ 
T Consensus       183 ~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hl  262 (353)
T PF00930_consen  183 DYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHL  262 (353)
T ss_dssp             SEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEE
T ss_pred             ccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEE
Confidence            4456788898888844432  2222 2222   666655443333 11222   2345554 6555 444455666544 


Q ss_pred             -EEEccCCCeEEEEeccCCCCcccceeeE-EEEEcCCCceEE-EeccCC----eEEEEecC-CCCCCcccccccccceeE
Q psy15191        203 -LYKRQSSGRLSLVACSDKTNGVHKRIIW-GVAWSHDSRYFL-TISRDG----VCVVWGLG-EPPTEEDLVQNTLWPEVQ  274 (312)
Q Consensus       203 -~wd~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~-s~~~dg----~i~iwd~~-~~~~~~~~~~~~~~~~~~  274 (312)
                       +++....... .++.       ..-.|. -+.++++++.|+ ++..++    .|+.-++. .+             .+.
T Consensus       263 y~~~~~~~~~~-~lT~-------G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~-------------~~~  321 (353)
T PF00930_consen  263 YLYDLDGGKPR-QLTS-------GDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGG-------------EPK  321 (353)
T ss_dssp             EEEETTSSEEE-ESS--------SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETT-------------EEE
T ss_pred             EEEccccccee-cccc-------CceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCC-------------CeE
Confidence             4455443322 2221       223353 367788876544 554422    45555555 22             344


Q ss_pred             EeeccCcceeEEEeccCCCeEEEEec
Q psy15191        275 KLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       275 ~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      .+......-..+.|||+|++++-...
T Consensus       322 ~LT~~~~~~~~~~~Spdg~y~v~~~s  347 (353)
T PF00930_consen  322 CLTCEDGDHYSASFSPDGKYYVDTYS  347 (353)
T ss_dssp             ESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred             eccCCCCCceEEEECCCCCEEEEEEc
Confidence            44433333368999999998876543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4499|consensus

Probab=96.98  E-value=0.095  Score=39.48  Aligned_cols=183  Identities=13%  Similarity=0.029  Sum_probs=97.2

Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccC----
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQ----  177 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~----  177 (312)
                      .+.++..-.|.-||..........+...........+...-..+|+|+++.-...+-.-.+......+..-+.+|.    
T Consensus        74 ~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i  153 (310)
T KOG4499|consen   74 AVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELI  153 (310)
T ss_pred             EEeecceEEEEEcccccceeeeeeeccccCchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceee
Confidence            3334443345557644332222222221111223455677788999998553333222222111122222222332    


Q ss_pred             ----CceeEEEECCCCCEEEE-EecCCeEEEEE--ccCCC-----eEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        178 ----LTITQLAFSPDDTHLVS-VSRDRRWGLYK--RQSSG-----RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       178 ----~~v~~~~~~~~~~~l~~-~~~d~~i~~wd--~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                          .--+.++|+.+.+.+.. -+.+-.|.-||  ..++.     .+..++..  ... .....-.++..-+|.+.++.-
T Consensus       154 ~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~--~~~-e~~~PDGm~ID~eG~L~Va~~  230 (310)
T KOG4499|consen  154 WNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKS--QPF-ESLEPDGMTIDTEGNLYVATF  230 (310)
T ss_pred             ehhccCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccC--CCc-CCCCCCcceEccCCcEEEEEe
Confidence                22256888887766554 45677787787  33322     22222211  111 111122455666888888888


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC--CCeEEEEe
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD--GTLLASAC  299 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~s  299 (312)
                      ..++|...|..+++            .+.++.-....|++++|---  .-+.+|+.
T Consensus       231 ng~~V~~~dp~tGK------------~L~eiklPt~qitsccFgGkn~d~~yvT~a  274 (310)
T KOG4499|consen  231 NGGTVQKVDPTTGK------------ILLEIKLPTPQITSCCFGGKNLDILYVTTA  274 (310)
T ss_pred             cCcEEEEECCCCCc------------EEEEEEcCCCceEEEEecCCCccEEEEEeh
Confidence            88999999998884            67777777888999999643  23444443

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.97  E-value=0.16  Score=41.66  Aligned_cols=70  Identities=21%  Similarity=0.155  Sum_probs=41.7

Q ss_pred             ceeeEEEEEcC-------CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        226 KRIIWGVAWSH-------DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       226 ~~~v~~~~~~~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ...+..+.|..       .|.+|++.-..+.|....+......        .+....+......+.++++.|||.++++.
T Consensus       252 ~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~--------~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~  323 (331)
T PF07995_consen  252 HSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSV--------TEEEEFLGGFGGRPRDVAQGPDGALYVSD  323 (331)
T ss_dssp             T--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEE--------EEEEEECTTSSS-EEEEEEETTSEEEEEE
T ss_pred             ccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCc--------cceEEccccCCCCceEEEEcCCCeEEEEE
Confidence            34566677653       4557777666778888877544211        01112223445589999999999999998


Q ss_pred             ecCCC
Q psy15191        299 CKATK  303 (312)
Q Consensus       299 s~d~~  303 (312)
                      ..+++
T Consensus       324 d~~G~  328 (331)
T PF07995_consen  324 DSDGK  328 (331)
T ss_dssp             -TTTT
T ss_pred             CCCCe
Confidence            55554

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.96  E-value=0.0053  Score=50.73  Aligned_cols=107  Identities=15%  Similarity=0.103  Sum_probs=60.5

Q ss_pred             CCCCCEEEEEe---------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        186 SPDDTHLVSVS---------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       186 ~~~~~~l~~~~---------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      |||+++++...         ..+.+.++|+.+.+......        ....+....|+|+|+.+|... ++.|++++..
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~--------~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~   71 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP--------PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLA   71 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS---------EETTBSEEEE-SSSTEEEEEE-TTEEEEESST
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC--------CccccccceeecCCCeeEEEe-cCceEEEECC
Confidence            57888777643         23668999998754443322        234466789999999998875 5679999876


Q ss_pred             CCCCCcccccccccceeEEee-----cc-CcceeEEEeccCCCeEEEEecCC
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLY-----GH-GYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~-----~~-~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      .+... .+.....-....-..     .. -+.-..+.|||||++||....|.
T Consensus        72 ~~~~~-~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~  122 (353)
T PF00930_consen   72 TGQET-QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDE  122 (353)
T ss_dssp             TSEEE-ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-
T ss_pred             CCCeE-EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECC
Confidence            65211 110000000000000     00 11235789999999999987654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.90  E-value=0.24  Score=42.68  Aligned_cols=105  Identities=17%  Similarity=0.192  Sum_probs=58.2

Q ss_pred             eEEEEeCCCcEEEEcCCCC---cceeee--eeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEEecc--cCceeee
Q psy15191        101 HLLSCSMDKSIIVWAPDPT---TGLWLE--TARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHLDVT--TWKQIQT  172 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~---~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~d~~--~~~~~~~  172 (312)
                      .+++.-....|.+|.+...   +..++.  +..+.+  ...--...+.|+|....|++-.. |-.|..+.+  +-.+...
T Consensus        74 aLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e--~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaD  151 (671)
T PF15390_consen   74 ALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIRE--PFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKAD  151 (671)
T ss_pred             ceEEEeccceEEEEEeccCccccccceeeeeeeccC--CcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEe
Confidence            5666666777888876521   111111  111110  11112346889999888776443 333433332  2233333


Q ss_pred             ecccCCceeEEEECCCCCEEEEEecC-CeEEEEEccC
Q psy15191        173 LPCHQLTITQLAFSPDDTHLVSVSRD-RRWGLYKRQS  208 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~wd~~~  208 (312)
                      + ...+.|.|.+|.+||+.|+.+-.. =.-++||-..
T Consensus       152 i-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  152 I-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             c-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            4 366889999999999988776433 2356777543

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.90  E-value=0.1  Score=40.57  Aligned_cols=131  Identities=15%  Similarity=0.111  Sum_probs=86.6

Q ss_pred             EECCCCCeEE-EeecCCeEEEecccCceeeeecccCCceeEEEECCCC-CEEEEEecCCe-EEEEEccCCCeEEEEeccC
Q psy15191        143 KFGPRGDYII-AHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDD-THLVSVSRDRR-WGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       143 ~~~~~~~~l~-~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~  219 (312)
                      ...++|++-+ ..+..|.+..     ...     -...-..|+++|.. .-++.+-.-|+ ..++|....+....+....
T Consensus        42 f~~~dgs~g~a~~~eaGk~v~-----~~~-----lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~  111 (366)
T COG3490          42 FDARDGSFGAATLSEAGKIVF-----ATA-----LPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQE  111 (366)
T ss_pred             eeccCCceeEEEEccCCceee-----eee-----cccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEeccc
Confidence            3345776643 4455565544     111     12333457888843 34555555555 6789998877777666544


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEecc-----CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISR-----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                      ...+     --.-.|||||++|+..-.     .|.|-|||.+.+-           +.+.++..|.-....+.|.+||+.
T Consensus       112 ~RHf-----yGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f-----------qrvgE~~t~GiGpHev~lm~DGrt  175 (366)
T COG3490         112 GRHF-----YGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF-----------QRVGEFSTHGIGPHEVTLMADGRT  175 (366)
T ss_pred             Ccee-----ecccccCCCCcEEEeecCCCCCCCceEEEEeccccc-----------ceecccccCCcCcceeEEecCCcE
Confidence            3321     112479999999987643     3689999998653           267788888888889999999999


Q ss_pred             EEEEe
Q psy15191        295 LASAC  299 (312)
Q Consensus       295 l~s~s  299 (312)
                      |+.+.
T Consensus       176 lvvan  180 (366)
T COG3490         176 LVVAN  180 (366)
T ss_pred             EEEeC
Confidence            98874

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.85  E-value=0.22  Score=41.67  Aligned_cols=180  Identities=12%  Similarity=0.075  Sum_probs=111.7

Q ss_pred             Cc-eEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeC---CCcEEEEcCCCCcceeeeeeeecccC
Q psy15191         65 HK-DLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSM---DKSIIVWAPDPTTGLWLETARVGEVG  133 (312)
Q Consensus        65 ~~-~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~  133 (312)
                      +. ..++...+..|.+.|..+....       ........+++..+..+..   ++++.+.|..+.+  .....+...  
T Consensus        85 ~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~--~~~~~~vG~--  160 (381)
T COG3391          85 GNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK--VTATIPVGN--  160 (381)
T ss_pred             CCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCe--EEEEEecCC--
Confidence            55 5556666789999996665542       2222333455545544444   5777777776633  333333211  


Q ss_pred             CCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceee-e---ecccCCceeEEEECCCCCEEEEEecC---CeEEEE
Q psy15191        134 GNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQ-T---LPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLY  204 (312)
Q Consensus       134 ~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~-~---~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~w  204 (312)
                         .+ ..++++|+|+.++.+. .++.+.+ |...-.... .   ...-...-..+.++|+|.++......   +.+...
T Consensus       161 ---~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~i  236 (381)
T COG3391         161 ---TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKI  236 (381)
T ss_pred             ---Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEE
Confidence               22 7899999999777666 6677777 766555543 1   01122344678999999977665444   588888


Q ss_pred             EccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCC
Q psy15191        205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEP  258 (312)
Q Consensus       205 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~  258 (312)
                      |..+...........     .. ....+..+|+|+++.... ..+.+.+-|..+.
T Consensus       237 d~~~~~v~~~~~~~~-----~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         237 DTATGNVTATDLPVG-----SG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             eCCCceEEEeccccc-----cC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            888766554412111     11 345689999999888774 4478888887765

>KOG2444|consensus

Probab=96.82  E-value=0.0041  Score=46.23  Aligned_cols=138  Identities=12%  Similarity=0.035  Sum_probs=80.3

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeee------ec
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQT------LP  174 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~------~~  174 (312)
                      .+...+.++.|.-++++..+..+.....      +...   ...-.-+..+++|+.+|.+.+    |..-..      ..
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~------~~e~---~~v~~~~~~~~vG~~dg~v~~----~n~n~~g~~~d~~~   98 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERF------IDEG---QRVVTASAKLMVGTSDGAVYV----FNWNLEGAHSDRVC   98 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhh------hhcc---eeecccCceEEeecccceEEE----ecCCccchHHHhhh
Confidence            4556677888888877653322111110      1111   111224567899999999988    433210      11


Q ss_pred             ccCCcee-EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccc-eeeEEEEEcCCCceEEEe--ccCCeE
Q psy15191        175 CHQLTIT-QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHK-RIIWGVAWSHDSRYFLTI--SRDGVC  250 (312)
Q Consensus       175 ~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~--~~dg~i  250 (312)
                      .....|. .+.-..++.+..+++.||.|+.|++...+.+-....       |. .++.....+..+++++.+  |.|..+
T Consensus        99 s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~-------h~~~~~e~~ivv~sd~~i~~a~~S~d~~~  171 (238)
T KOG2444|consen   99 SGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQ-------HNFESGEELIVVGSDEFLKIADTSHDRVL  171 (238)
T ss_pred             cccccceeccccccccceeEEeccCCceeeeccccCceeeeecc-------ccCCCcceeEEecCCceEEeeccccchhh
Confidence            1112222 222233566888999999999999987666554443       33 445555555666777777  777788


Q ss_pred             EEEecCCC
Q psy15191        251 VVWGLGEP  258 (312)
Q Consensus       251 ~iwd~~~~  258 (312)
                      +.|++..-
T Consensus       172 k~W~ve~~  179 (238)
T KOG2444|consen  172 KKWNVEKI  179 (238)
T ss_pred             hhcchhhh
Confidence            88877543

>KOG2395|consensus

Probab=96.76  E-value=0.049  Score=45.85  Aligned_cols=139  Identities=10%  Similarity=0.071  Sum_probs=81.1

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC--------eEEEeecCCeEEEecccCce--e
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD--------YIIAHGFQGSLHLDVTTWKQ--I  170 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~~~~~i~~d~~~~~~--~  170 (312)
                      ++.++.....++-.|++.++.  +..-..     +. .|.-+.+.|+.+        .|+--+..+..++|++-...  +
T Consensus       348 il~~~~~~~~l~klDIE~GKI--VeEWk~-----~~-di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl  419 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKI--VEEWKF-----ED-DINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKL  419 (644)
T ss_pred             EeeCCCCcCcceeeeccccee--eeEeec-----cC-CcceeeccCCcchhcccccccEEeecCCceEEecccccCccee
Confidence            455566666777778877443  222221     11 144455666543        24444455556665552211  1


Q ss_pred             eeec----ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        171 QTLP----CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       171 ~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      .-.+    .......|.+-..+| +++.|+.+|.|++||--.......+++       ...+|..+..+.+|++|+..+.
T Consensus       420 ~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPg-------LG~~I~hVdvtadGKwil~Tc~  491 (644)
T KOG2395|consen  420 AVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPG-------LGDAIKHVDVTADGKWILATCK  491 (644)
T ss_pred             eeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccc-------cCCceeeEEeeccCcEEEEecc
Confidence            1111    223445666666565 789999999999999743333333333       6678999999999999886654


Q ss_pred             CCeEEEEecC
Q psy15191        247 DGVCVVWGLG  256 (312)
Q Consensus       247 dg~i~iwd~~  256 (312)
                       ..+.+-++.
T Consensus       492 -tyLlLi~t~  500 (644)
T KOG2395|consen  492 -TYLLLIDTL  500 (644)
T ss_pred             -cEEEEEEEe
Confidence             456666653

>KOG4441|consensus

Probab=96.74  E-value=0.35  Score=42.79  Aligned_cols=221  Identities=11%  Similarity=0.039  Sum_probs=111.5

Q ss_pred             CCeEEEEeccCCC---ceEEE-EEeCCCCceEE--EEccccCcEEEEEEecCcCcCCCCceEEEecCC-C-----cEEEe
Q psy15191         13 GGKVLYTLTNHKS---KVMAV-KWNGEGGKVLY--TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-K-----TAILW   80 (312)
Q Consensus        13 ~~~~~~~~~~h~~---~v~~~-~w~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-g-----~i~vw   80 (312)
                      ..+.+..+.|-..   ....+ .+|+.+++-..  .+. +...-.+++...       +.+.++||.| |     ++..|
T Consensus       283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~~-------~~lYv~GG~~~~~~~l~~ve~Y  354 (571)
T KOG4441|consen  283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVLN-------GKLYVVGGYDSGSDRLSSVERY  354 (571)
T ss_pred             CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEEC-------CEEEEEccccCCCcccceEEEe
Confidence            3455666666432   22223 46776653222  222 222334444443       4788999998 3     46677


Q ss_pred             eecCCcccccccccC--------CCCCceEEEEeCCCc-----EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC
Q psy15191         81 KYVSEGNYLPYHMRD--------DSKQLHLLSCSMDKS-----IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR  147 (312)
Q Consensus        81 ~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  147 (312)
                      |..+.+...+..+..        .-++...++|+.||.     +-.||..+.+-.......     ......-  ...-+
T Consensus       355 D~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~-----~~r~~~g--v~~~~  427 (571)
T KOG4441|consen  355 DPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML-----TRRSGHG--VAVLG  427 (571)
T ss_pred             cCCCCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCC-----cceeeeE--EEEEC
Confidence            777766422111111        224556788888854     566777663322111111     1111111  22236


Q ss_pred             CCeEEEeecCCeE-EE--------ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCe-----EEEEEccCCCeEE
Q psy15191        148 GDYIIAHGFQGSL-HL--------DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR-----WGLYKRQSSGRLS  213 (312)
Q Consensus       148 ~~~l~~~~~~~~i-~~--------d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~~wd~~~~~~~~  213 (312)
                      |...++|+.++.- .+        ...+|.................+  ++...+.|+.|+.     +..||..+.+-..
T Consensus       428 g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~  505 (571)
T KOG4441|consen  428 GKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVL--NGKIYVVGGFDGTSALSSVERYDPETNQWTM  505 (571)
T ss_pred             CEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEE--CCEEEEECCccCCCccceEEEEcCCCCceeE
Confidence            7888888876655 32        33456555554422222222222  5777788887763     6778877655433


Q ss_pred             EEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCC
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGE  257 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~  257 (312)
                      .-...  .   ....+..+.+  +++..+.|+.||     +|..||..+
T Consensus       506 v~~m~--~---~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~  547 (571)
T KOG4441|consen  506 VAPMT--S---PRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPET  547 (571)
T ss_pred             cccCc--c---ccccccEEEE--CCEEEEEecccCccccceeEEcCCCC
Confidence            31111  0   1111212222  677788888877     566665444

>PHA02713 hypothetical protein; Provisional

Probab=96.70  E-value=0.25  Score=43.73  Aligned_cols=179  Identities=7%  Similarity=0.028  Sum_probs=87.4

Q ss_pred             CceEEEecCC------CcEEEeeecCCccccccccc--------CCCCCceEEEEeCCC-----cEEEEcCCCCcceeee
Q psy15191         65 HKDLVSCSLD------KTAILWKYVSEGNYLPYHMR--------DDSKQLHLLSCSMDK-----SIIVWAPDPTTGLWLE  125 (312)
Q Consensus        65 ~~~l~s~~~d------g~i~vw~~~~~~~~~~~~~~--------~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~  125 (312)
                      +.+++.||.+      ..+..||..+.....+...+        ..-++...+.|+.++     .+..||..+.  .+..
T Consensus       304 ~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~--~W~~  381 (557)
T PHA02713        304 NEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDD--KWKM  381 (557)
T ss_pred             CEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCC--eEEE
Confidence            5677788754      24667787666432111111        112344566676653     3777888763  3322


Q ss_pred             eeeecccCCCccceeEEEECCCCCeEEEeecCC-----------------------eEEE-e--cccCceeeeecccCCc
Q psy15191        126 TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----------------------SLHL-D--VTTWKQIQTLPCHQLT  179 (312)
Q Consensus       126 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------------------~i~~-d--~~~~~~~~~~~~~~~~  179 (312)
                      ..+   ++........++  -+++..+.|+.++                       .+.. |  ..+|.....+......
T Consensus       382 ~~~---mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~  456 (557)
T PHA02713        382 LPD---MPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIR  456 (557)
T ss_pred             CCC---CCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCccccc
Confidence            211   111111122222  2577777777653                       2333 4  3456655544322222


Q ss_pred             eeEEEECCCCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--eEE
Q psy15191        180 ITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--VCV  251 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~  251 (312)
                      ...+.+  +++..+.|+.+      ..+..||..+.........-..    .......+++  ++++.+.|+.++  .+.
T Consensus       457 ~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~----~r~~~~~~~~--~~~iyv~Gg~~~~~~~e  528 (557)
T PHA02713        457 PGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES----RLSALHTILH--DNTIMMLHCYESYMLQD  528 (557)
T ss_pred             CcEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc----ccccceeEEE--CCEEEEEeeecceeehh
Confidence            112222  56666677654      2367788876222222221100    1111222333  788899999888  666


Q ss_pred             EEecCCC
Q psy15191        252 VWGLGEP  258 (312)
Q Consensus       252 iwd~~~~  258 (312)
                      .||..+.
T Consensus       529 ~yd~~~~  535 (557)
T PHA02713        529 TFNVYTY  535 (557)
T ss_pred             hcCcccc
Confidence            6766554

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.69  E-value=0.24  Score=39.74  Aligned_cols=148  Identities=13%  Similarity=0.129  Sum_probs=74.5

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC--------cccccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE--------GNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      -.+.+..+..+++      |++++.++.-....-||--..        ....+..+.+.+++.+.+ ....|.|+.=+..
T Consensus       143 ~~gs~~~~~r~~d------G~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~-~~~Gg~~~~s~~~  215 (302)
T PF14870_consen  143 TSGSINDITRSSD------GRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWM-LARGGQIQFSDDP  215 (302)
T ss_dssp             ----EEEEEE-TT------S-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEE-EETTTEEEEEE-T
T ss_pred             CcceeEeEEECCC------CcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEE-EeCCcEEEEccCC
Confidence            3466778777777      888888876555566664321        112444455556654444 4488888877622


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE---ecccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      .....+..  ...........+..++|.+++...++|+ .|.+..   .-++|+.......-...+..+.|.++.+-++.
T Consensus       216 ~~~~~w~~--~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~l  292 (302)
T PF14870_consen  216 DDGETWSE--PIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVL  292 (302)
T ss_dssp             TEEEEE-----B-TTSS--S-EEEEEESSSS-EEEEES-TT-EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE
T ss_pred             CCcccccc--ccCCcccCceeeEEEEecCCCCEEEEeC-CccEEEeCCCCccceECccccCCCCceEEEEEcCCCceEEE
Confidence            21111111  1112223344588999998877666554 555555   56778877665556677899999866555554


Q ss_pred             EecCCeEEEE
Q psy15191        195 VSRDRRWGLY  204 (312)
Q Consensus       195 ~~~d~~i~~w  204 (312)
                       +.+|.|--|
T Consensus       293 -G~~G~ll~~  301 (302)
T PF14870_consen  293 -GQDGVLLRY  301 (302)
T ss_dssp             --STTEEEEE
T ss_pred             -CCCcEEEEe
Confidence             578876544

>PHA02713 hypothetical protein; Provisional

Probab=96.67  E-value=0.19  Score=44.47  Aligned_cols=200  Identities=11%  Similarity=0.117  Sum_probs=93.7

Q ss_pred             cEEEeeecCCcccccccccC--------CCCCceEEEEeCC------CcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         76 TAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        76 ~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      .+..||..+.....+...+.        .-++..++.|+.+      ..+..||+.+.  .+....   .+.........
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n--~W~~~~---~m~~~R~~~~~  347 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENK--IHVELP---PMIKNRCRFSL  347 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCC--eEeeCC---CCcchhhceeE
Confidence            45667776655422221111        1133455666643      34667777763  232211   11111112222


Q ss_pred             EEECCCCCeEEEeecCCe-----EEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEecCC--------------
Q psy15191        142 CKFGPRGDYIIAHGFQGS-----LHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--------------  199 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~-----i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------  199 (312)
                      +  .-+++..+.|+.++.     +.. |.  .+|.....+.........+.+  ++...+.|+.++              
T Consensus       348 ~--~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~  423 (557)
T PHA02713        348 A--VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSID  423 (557)
T ss_pred             E--EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCccccccccccccccc
Confidence            2  236777788887643     333 43  356655444422222222233  577777777553              


Q ss_pred             ---------eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC------eEEEEecCCCCCCccc
Q psy15191        200 ---------RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG------VCVVWGLGEPPTEEDL  264 (312)
Q Consensus       200 ---------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~  264 (312)
                               .+..||..+.+-.. ... ...   ..... +++ .-++++.+.|+.++      .+..||..+.      
T Consensus       424 ~~~~~~~~~~ve~YDP~td~W~~-v~~-m~~---~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~------  490 (557)
T PHA02713        424 MEEDTHSSNKVIRYDTVNNIWET-LPN-FWT---GTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTY------  490 (557)
T ss_pred             ccccccccceEEEECCCCCeEee-cCC-CCc---ccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCCC------
Confidence                     36667766543221 111 000   00111 122 22567777776542      3566776541      


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                         ..|..+..+.........++  -+|++.++||.++
T Consensus       491 ---~~W~~~~~m~~~r~~~~~~~--~~~~iyv~Gg~~~  523 (557)
T PHA02713        491 ---NGWELITTTESRLSALHTIL--HDNTIMMLHCYES  523 (557)
T ss_pred             ---CCeeEccccCcccccceeEE--ECCEEEEEeeecc
Confidence               13555555544333333333  3778889997665

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.65  E-value=0.25  Score=42.49  Aligned_cols=143  Identities=13%  Similarity=0.163  Sum_probs=87.0

Q ss_pred             cceeEEEECCCCCe-EEEee--cCCeEEEecccCceeeeecccCCceeEEEECCC----CCEEEEEecCCeEEEEEccC-
Q psy15191        137 LGFYGCKFGPRGDY-IIAHG--FQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPD----DTHLVSVSRDRRWGLYKRQS-  208 (312)
Q Consensus       137 ~~v~~~~~~~~~~~-l~~~~--~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~~wd~~~-  208 (312)
                      .++..++|. ||+. +++.-  .+|.+++    ++....  +.-..|..+.|.|-    ...|++.-....|.+|.+.. 
T Consensus        20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kf----Gds~vi--GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s   92 (671)
T PF15390_consen   20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKF----GDSKVI--GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS   92 (671)
T ss_pred             ccccceEec-CCCEEEEEeeeeeCCcccc----CCccEe--eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence            467889996 5554 44432  4666666    443221  23356899999993    33566667788999999862 


Q ss_pred             ----CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee
Q psy15191        209 ----SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY  284 (312)
Q Consensus       209 ----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  284 (312)
                          .+.+....+.....  ..--..++.|+|....|+.-.....-.++++.....           .+..=....+.|.
T Consensus        93 ~~e~~K~l~sQtcEi~e~--~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~s-----------rVkaDi~~~G~Ih  159 (671)
T PF15390_consen   93 TTERNKLLMSQTCEIREP--FPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSS-----------RVKADIKTSGLIH  159 (671)
T ss_pred             ccccccceeeeeeeccCC--cccCCCcccccCCCceEEEEecCceeEeeeeeeCCc-----------eEEEeccCCceEE
Confidence                22222222221111  111123578999999888776665545666665432           2222224567899


Q ss_pred             EEEeccCCCeEEEEe
Q psy15191        285 SLAASHDGTLLASAC  299 (312)
Q Consensus       285 ~~~~s~~~~~l~s~s  299 (312)
                      +.+|.+||+.|+.+-
T Consensus       160 CACWT~DG~RLVVAv  174 (671)
T PF15390_consen  160 CACWTKDGQRLVVAV  174 (671)
T ss_pred             EEEecCcCCEEEEEe
Confidence            999999999888773

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.62  E-value=0.23  Score=38.60  Aligned_cols=139  Identities=14%  Similarity=0.112  Sum_probs=75.2

Q ss_pred             eecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191        154 HGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       154 ~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                      .=.++...+ |..+.+.+..+. ..+.=..++  .|++.|+.+.....|+++|..+.+....+.......  .-..++.+
T Consensus       106 TWk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~--pv~~LNEL  180 (264)
T PF05096_consen  106 TWKEGTGFVYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGR--PVSNLNEL  180 (264)
T ss_dssp             ESSSSEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTE--E---EEEE
T ss_pred             EecCCeEEEEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCE--ECCCcEeE
Confidence            345566666 888888887776 345556676  467778887778889999998877776666543211  23346667


Q ss_pred             EEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE---eeccCcceeEEEeccCCC-eEEEE
Q psy15191        233 AWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK---LYGHGYEIYSLAASHDGT-LLASA  298 (312)
Q Consensus       233 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~-~l~s~  298 (312)
                      .|- +|...|=.-....|...|..++.......-..+.+....   ......-.+.+|+.|..+ +++||
T Consensus       181 E~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  181 EYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             EEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            775 666666555666777778777743221110000000000   001134688999988765 45554

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.62  E-value=0.078  Score=43.42  Aligned_cols=118  Identities=22%  Similarity=0.211  Sum_probs=60.1

Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC----CceEEEeccC-------
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD----SRYFLTISRD-------  247 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~s~~~d-------  247 (312)
                      ..+.|+|.|||++|++ ...|.|++++.. ......+................++++|+    +.+.++.+..       
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~~-g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~   80 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVDKD-GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN   80 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEETT-TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEeCC-CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence            3578999999987665 569999999933 33212222221222225567889999994    4433333321       


Q ss_pred             -CeEEEEecCCCCCCcccccccccceeEEeec---cCcceeEEEeccCCCeEEEEecCC
Q psy15191        248 -GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG---HGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       248 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                       ..|.-|.+....  ......+  ..+..+..   .......|+|.|||.++++.+..+
T Consensus        81 ~~~v~r~~~~~~~--~~~~~~~--~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~  135 (331)
T PF07995_consen   81 DNRVVRFTLSDGD--GDLSSEE--VLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG  135 (331)
T ss_dssp             EEEEEEEEEETTS--CEEEEEE--EEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred             ceeeEEEeccCCc--cccccce--EEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence             234444443331  1100000  01222222   223345699999998888776544

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=96.60  E-value=0.22  Score=40.98  Aligned_cols=145  Identities=18%  Similarity=0.113  Sum_probs=74.0

Q ss_pred             ceeEEEECCCCCeEEEeec-CCe--EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        138 GFYGCKFGPRGDYIIAHGF-QGS--LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~-~~~--i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      ..+.=+|.++|+.|+.++. +|.  +.+ |+.+.+..+--.+.........++|+.+.++-......++-.|+++.+...
T Consensus        37 YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~  116 (386)
T PF14583_consen   37 YFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERV  116 (386)
T ss_dssp             -TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEE
T ss_pred             eecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEE
Confidence            3444578889977665554 544  444 999888776554322333356778888888776667789999999988766


Q ss_pred             EEeccCCCCcccceeeEEEEE--cCCCceEEEecc---C-------------------CeEEEEecCCCCCCcccccccc
Q psy15191        214 LVACSDKTNGVHKRIIWGVAW--SHDSRYFLTISR---D-------------------GVCVVWGLGEPPTEEDLVQNTL  269 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~---d-------------------g~i~iwd~~~~~~~~~~~~~~~  269 (312)
                      .+..+       ...+-...|  +.++..++..-.   |                   ..|.--|+.++           
T Consensus       117 vy~~p-------~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG-----------  178 (386)
T PF14583_consen  117 VYEVP-------DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTG-----------  178 (386)
T ss_dssp             EEE---------TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT------------
T ss_pred             EEECC-------cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCC-----------
Confidence            66653       222322344  345555543211   1                   12333344433           


Q ss_pred             cceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        270 WPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       270 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                        ....+..-...+..+.|||...-+++=+..|
T Consensus       179 --~~~~v~~~~~wlgH~~fsP~dp~li~fCHEG  209 (386)
T PF14583_consen  179 --ERKVVFEDTDWLGHVQFSPTDPTLIMFCHEG  209 (386)
T ss_dssp             ---EEEEEEESS-EEEEEEETTEEEEEEEEE-S
T ss_pred             --ceeEEEecCccccCcccCCCCCCEEEEeccC
Confidence              2344444456778889999877666665554

>KOG2079|consensus

Probab=96.59  E-value=0.012  Score=53.53  Aligned_cols=93  Identities=15%  Similarity=0.144  Sum_probs=65.6

Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      .+..++.|+..|.+-..|+...-.. ....     ....++|++++|+.+|+.++.|-.+|.|.+||+..++        
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~-~~~n-----e~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k--------  163 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGP-LHQN-----ERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAK--------  163 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccch-hhcC-----CccCCcceeeEecCCCceeccccCCCcEEEEEccCCc--------
Confidence            4557888888899999998754111 1111     1156789999999999999999999999999998864        


Q ss_pred             cccceeEEeeccCcceeEE---EeccCCCeEEEE
Q psy15191        268 TLWPEVQKLYGHGYEIYSL---AASHDGTLLASA  298 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~---~~s~~~~~l~s~  298 (312)
                          .++.+..|..+.+++   .+..++..+.++
T Consensus       164 ----~l~~i~e~~ap~t~vi~v~~t~~nS~llt~  193 (1206)
T KOG2079|consen  164 ----ILKVITEHGAPVTGVIFVGRTSQNSKLLTS  193 (1206)
T ss_pred             ----ceeeeeecCCccceEEEEEEeCCCcEEEEc
Confidence                455555555554444   334455566666

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.57  E-value=0.25  Score=39.24  Aligned_cols=140  Identities=18%  Similarity=0.154  Sum_probs=77.0

Q ss_pred             CCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec---cC--
Q psy15191        146 PRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC---SD--  219 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~--  219 (312)
                      ..++.|+.|..+| +.+ +.......... .+...|..+...|+-+.|++-+ |+.++++++...........   ..  
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i-~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~   81 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRI-LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR   81 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeE-eecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence            4578899999998 555 44211111112 2334499999999888777664 69999999987554432110   00  


Q ss_pred             --CCCcccceeeEEEE--EcCCC-ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        220 --KTNGVHKRIIWGVA--WSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       220 --~~~~~~~~~v~~~~--~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                        .........+...+  -.+.+ .+|+.+ ....|.+|..........       +...++.- ...+.+++|.  ++.
T Consensus        82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~-------~~~ke~~l-p~~~~~i~~~--~~~  150 (275)
T PF00780_consen   82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFS-------KLLKEISL-PDPPSSIAFL--GNK  150 (275)
T ss_pred             cccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCccccc-------ceeEEEEc-CCCcEEEEEe--CCE
Confidence              00000222344444  12233 344444 445899998876421110       13444433 3677888888  456


Q ss_pred             EEEEe
Q psy15191        295 LASAC  299 (312)
Q Consensus       295 l~s~s  299 (312)
                      |+.|.
T Consensus       151 i~v~~  155 (275)
T PF00780_consen  151 ICVGT  155 (275)
T ss_pred             EEEEe
Confidence            66664

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.51  E-value=0.28  Score=38.28  Aligned_cols=199  Identities=15%  Similarity=0.114  Sum_probs=111.7

Q ss_pred             EEEEEEecCcCcCCCCceEEEecCCCc-EEEeeecCCccccccc----------ccCCCCCceEEEEeCC-----CcEEE
Q psy15191         50 VMAVKWVLNTSLDPEHKDLVSCSLDKT-AILWKYVSEGNYLPYH----------MRDDSKQLHLLSCSMD-----KSIIV  113 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~~l~s~~~dg~-i~vw~~~~~~~~~~~~----------~~~~~~~~~l~~~~~d-----~~i~i  113 (312)
                      -..++|+|.     -..-++.+-.-|+ ..++|....+......          ..+++++.+|.+.-.|     |.|-+
T Consensus        70 ~Hgi~~~p~-----~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGv  144 (366)
T COG3490          70 GHGIAFHPA-----LPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGV  144 (366)
T ss_pred             cCCeecCCC-----CcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEE
Confidence            345666665     1234555555554 4567776665421111          1246778777765443     77899


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-------CCeEEEec------------ccCceeeeec
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-------QGSLHLDV------------TTWKQIQTLP  174 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~~~i~~d~------------~~~~~~~~~~  174 (312)
                      ||.+..      -.+..++..|.-....+.+.+||+.++.+..       -|...+++            .+++++.+..
T Consensus       145 Yd~r~~------fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~  218 (366)
T COG3490         145 YDAREG------FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHT  218 (366)
T ss_pred             Eecccc------cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhcc
Confidence            998842      1234455667777888999999999887543       22333333            3333333211


Q ss_pred             ----ccCCceeEEEECCCCCEEEEEecCCe-----EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        175 ----CHQLTITQLAFSPDDTHLVSVSRDRR-----WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       175 ----~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                          .+.-.|..++..+||..++.+-..|.     -.+=-...++.+..+..+.+........|-+++.+.+..+++..+
T Consensus       219 Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTS  298 (366)
T COG3490         219 LPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTS  298 (366)
T ss_pred             CchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEec
Confidence                24456788888888876655433321     111111223333333333222222345677888886666555444


Q ss_pred             -cCCeEEEEecCCCC
Q psy15191        246 -RDGVCVVWGLGEPP  259 (312)
Q Consensus       246 -~dg~i~iwd~~~~~  259 (312)
                       ..+...+||..++.
T Consensus       299 P~GN~~vi~da~tG~  313 (366)
T COG3490         299 PRGNRAVIWDAATGA  313 (366)
T ss_pred             CCCCeEEEEEcCCCc
Confidence             56688899999884

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.51  E-value=0.21  Score=39.12  Aligned_cols=112  Identities=21%  Similarity=0.175  Sum_probs=66.8

Q ss_pred             ceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe-
Q psy15191        179 TITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG-  254 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd-  254 (312)
                      .+.+.+++++++.++...   ....++++...  .......        ....+....|++++...+....+...+++. 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~--------~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~   94 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL--------TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRD   94 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec--------cCCccccccccCCCCEEEEEcCCCceEEEEe
Confidence            688999999999887765   22345555443  3332222        122466789999988887777666667664 


Q ss_pred             cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      ...+....         .......-...|.++.+||||..+|....++.  ++.|.+
T Consensus        95 ~~~g~~~~---------~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~--~~~v~v  140 (253)
T PF10647_consen   95 SASGTGEP---------VEVDWPGLRGRITALRVSPDGTRVAVVVEDGG--GGRVYV  140 (253)
T ss_pred             cCCCccee---------EEecccccCCceEEEEECCCCcEEEEEEecCC--CCeEEE
Confidence            22221110         00111111128999999999998888765432  344543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2444|consensus

Probab=96.45  E-value=0.016  Score=43.21  Aligned_cols=102  Identities=17%  Similarity=0.136  Sum_probs=62.0

Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      +..++.|+.+|.|++|...............     .+.....+.-..++.+..+++.||.|+.|++....         
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~-----~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k---------  135 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSG-----EESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNK---------  135 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcc-----cccceeccccccccceeEEeccCCceeeeccccCc---------
Confidence            4578899999999999887322211111100     11112222333455678899999999999987763         


Q ss_pred             ccceeEEeeccC-cceeEEEeccCCCeEEEE--ecCCCcccceEEeC
Q psy15191        269 LWPEVQKLYGHG-YEIYSLAASHDGTLLASA--CKATKPEHAAIIIW  312 (312)
Q Consensus       269 ~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~--s~d~~~~dg~i~iW  312 (312)
                         .+.....|. .++..+..+..+++|+.+  |.|..     ++.|
T Consensus       136 ---~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~-----~k~W  174 (238)
T KOG2444|consen  136 ---VLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRV-----LKKW  174 (238)
T ss_pred             ---eeeeeccccCCCcceeEEecCCceEEeeccccchh-----hhhc
Confidence               344444555 566666666677777777  54444     6666

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.43  E-value=0.15  Score=44.93  Aligned_cols=113  Identities=14%  Similarity=0.113  Sum_probs=70.7

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc--CCCceEEEeccCCeEEEEec
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS--HDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~  255 (312)
                      ....-+.-+.-++..++-+....+.|||.+..........      .....|.++.|.  |+++.+++.+..+.|.+|--
T Consensus        30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f------~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q  103 (631)
T PF12234_consen   30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF------SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ  103 (631)
T ss_pred             CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee------cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence            3444455555455444444456799999987663332221      156778999885  78999999999999999843


Q ss_pred             CCCCCCcccccccccceeEEe--eccC-cceeEEEeccCCCeEEEEe
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKL--YGHG-YEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~--~~~~-~~v~~~~~s~~~~~l~s~s  299 (312)
                      ....-   ......|.++..+  ..|. .+|.+..|.++|.+++.++
T Consensus       104 ~R~dy---~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG  147 (631)
T PF12234_consen  104 LRYDY---TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG  147 (631)
T ss_pred             cchhh---hcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC
Confidence            21110   0113334455444  2343 5799999999998777664

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2377|consensus

Probab=96.31  E-value=0.18  Score=41.96  Aligned_cols=143  Identities=12%  Similarity=0.106  Sum_probs=87.5

Q ss_pred             eEEEECCCCCeEEEeecCCeEEE--ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL--DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      +.+-|....+.+++....|..-+  ..-.-+..-.+. ...++|.++.|++|.+.++.--.+++|.+++....+......
T Consensus        26 ngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~  105 (657)
T KOG2377|consen   26 NGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT  105 (657)
T ss_pred             cceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence            34555555555555444444333  222223322322 346799999999999999999999999999985444333222


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEE
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLA  296 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  296 (312)
                      ...+.   ....|.+.+|+.. .-+|.-+..| +-+|-......           .++..+.|...|+-..|.++-+.+.
T Consensus       106 ~~ck~---k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekr-----------slRlVks~~~nvnWy~yc~et~v~L  169 (657)
T KOG2377|consen  106 QECKT---KNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKR-----------SLRLVKSHNLNVNWYMYCPETAVIL  169 (657)
T ss_pred             HHhcc---CcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhh-----------hhhhhhhcccCccEEEEccccceEe
Confidence            21111   3345888999866 5566555555 66776544321           3455566788888888888877554


Q ss_pred             EE
Q psy15191        297 SA  298 (312)
Q Consensus       297 s~  298 (312)
                      -+
T Consensus       170 L~  171 (657)
T KOG2377|consen  170 LS  171 (657)
T ss_pred             ee
Confidence            44

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.23  E-value=0.21  Score=45.13  Aligned_cols=75  Identities=23%  Similarity=0.409  Sum_probs=55.0

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEEe-cccCceee---------e---e--------cccCCceeEEEECCC---CCEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHLD-VTTWKQIQ---------T---L--------PCHQLTITQLAFSPD---DTHL  192 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~d-~~~~~~~~---------~---~--------~~~~~~v~~~~~~~~---~~~l  192 (312)
                      ..|..+.++|+|.+++..|..|...+. .+.|-...         .   .        ..+...|..+.|+|.   +..|
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            468899999999999999998877762 22231110         0   0        034567899999995   5789


Q ss_pred             EEEecCCeEEEEEccCCCe
Q psy15191        193 VSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       193 ~~~~~d~~i~~wd~~~~~~  211 (312)
                      +.-+.|+.+|+||+.....
T Consensus       165 ~vLtsdn~lR~y~~~~~~~  183 (717)
T PF10168_consen  165 VVLTSDNTLRLYDISDPQH  183 (717)
T ss_pred             EEEecCCEEEEEecCCCCC
Confidence            9999999999999976443

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=96.21  E-value=0.75  Score=40.08  Aligned_cols=188  Identities=10%  Similarity=0.060  Sum_probs=101.9

Q ss_pred             ceEEEecCCCcEEEeeecCCcccc---ccc------cc-C----CCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeec
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNYL---PYH------MR-D----DSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVG  130 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~~---~~~------~~-~----~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  130 (312)
                      ..++.++.++.+.-.|..+++..=   ...      .. .    .-.+ ..++.++.++.|..+|.++++..+.......
T Consensus        62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~  141 (488)
T cd00216          62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNNDQ  141 (488)
T ss_pred             CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCCC
Confidence            456667778888888888776520   000      00 0    0112 5788888999999999999776665443211


Q ss_pred             ccCCCccceeEEEECC--CCCeEEEeec---------CCeEEE-ecccCceeeeecccCC--------------------
Q psy15191        131 EVGGNTLGFYGCKFGP--RGDYIIAHGF---------QGSLHL-DVTTWKQIQTLPCHQL--------------------  178 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~--~~~~l~~~~~---------~~~i~~-d~~~~~~~~~~~~~~~--------------------  178 (312)
                      .  ...   ..+.-+|  .+..++.++.         ++.+.- |..+++.+-.......                    
T Consensus       142 ~--~~~---~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~  216 (488)
T cd00216         142 V--PPG---YTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGG  216 (488)
T ss_pred             c--Ccc---eEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCC
Confidence            0  000   0011111  1234444432         455544 8877776655432100                    


Q ss_pred             ce-eEEEECCCCCEEEEEecCC------------------eEEEEEccCCCeEEEEeccCCCCc---ccce-eeEEEEEc
Q psy15191        179 TI-TQLAFSPDDTHLVSVSRDR------------------RWGLYKRQSSGRLSLVACSDKTNG---VHKR-IIWGVAWS  235 (312)
Q Consensus       179 ~v-~~~~~~~~~~~l~~~~~d~------------------~i~~wd~~~~~~~~~~~~~~~~~~---~~~~-~v~~~~~~  235 (312)
                      .+ ...++.+.+..++.++.++                  .|.-.|..+++..-..........   .... .+..+. .
T Consensus       217 ~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~-~  295 (488)
T cd00216         217 TSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK-P  295 (488)
T ss_pred             CccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc-c
Confidence            01 1344555566777777665                  799999998888766553211100   0111 111111 0


Q ss_pred             CCCc---eEEEeccCCeEEEEecCCCC
Q psy15191        236 HDSR---YFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       236 ~~~~---~l~s~~~dg~i~iwd~~~~~  259 (312)
                      -++.   .++.++.+|.+...|..++.
T Consensus       296 ~~g~~~~~V~~g~~~G~l~ald~~tG~  322 (488)
T cd00216         296 KDGKPVPAIVHAPKNGFFYVLDRTTGK  322 (488)
T ss_pred             cCCCeeEEEEEECCCceEEEEECCCCc
Confidence            1332   57778888999988888874

The alignment model contains an 8-bladed beta-propeller.

>PRK13684 Ycf48-like protein; Provisional

Probab=96.20  E-value=0.55  Score=38.56  Aligned_cols=145  Identities=11%  Similarity=0.124  Sum_probs=82.1

Q ss_pred             ccceeEEEECCCCCeEEEeecCCeEEE--e-c-ccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQGSLHL--D-V-TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~--d-~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      ...+.++.+.|++.++++ +..|.+..  + - ++|.....  .....++.+.+.++++.++++ ..|.+++=....+..
T Consensus       172 ~g~~~~i~~~~~g~~v~~-g~~G~i~~s~~~gg~tW~~~~~--~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s  247 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAV-SSRGNFYSTWEPGQTAWTPHQR--NSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES  247 (334)
T ss_pred             cceEEEEEECCCCeEEEE-eCCceEEEEcCCCCCeEEEeeC--CCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc
Confidence            456888999998765544 55566654  1 1 35655533  345678999999998876654 567665322333333


Q ss_pred             EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ......+..   .....+.++.+.|+++.++ ++.+|.|. .....         ...|+.+.....-....+.+.|..+
T Consensus       248 W~~~~~~~~---~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~---------G~tW~~~~~~~~~~~~~~~~~~~~~  313 (334)
T PRK13684        248 WSKPIIPEI---TNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDG---------GKTWEKDPVGEEVPSNFYKIVFLDP  313 (334)
T ss_pred             cccccCCcc---ccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCC---------CCCCeECCcCCCCCcceEEEEEeCC
Confidence            322211100   0223477889999877655 44567554 33222         2334343221222346778888777


Q ss_pred             CCeEEEE
Q psy15191        292 GTLLASA  298 (312)
Q Consensus       292 ~~~l~s~  298 (312)
                      ++.+++|
T Consensus       314 ~~~~~~G  320 (334)
T PRK13684        314 EKGFVLG  320 (334)
T ss_pred             CceEEEC
Confidence            7776655

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.17  E-value=0.54  Score=39.28  Aligned_cols=134  Identities=18%  Similarity=0.143  Sum_probs=61.2

Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC--CCCCeEEE-eecCCeEEE----ecccCceeeeec-----
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG--PRGDYIIA-HGFQGSLHL----DVTTWKQIQTLP-----  174 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~-~~~~~~i~~----d~~~~~~~~~~~-----  174 (312)
                      ...++.+||+.+.+.  +..+.+.   .....+..+.|.  |+..+-++ +.....|..    +-.+|+......     
T Consensus       220 yG~~l~vWD~~~r~~--~Q~idLg---~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~  294 (461)
T PF05694_consen  220 YGHSLHVWDWSTRKL--LQTIDLG---EEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKK  294 (461)
T ss_dssp             S--EEEEEETTTTEE--EEEEES----TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE
T ss_pred             ccCeEEEEECCCCcE--eeEEecC---CCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcc
Confidence            347899999998443  3333321   222335566665  44444333 333333333    334455444332     


Q ss_pred             --------------ccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccC---CC---------Ccccce
Q psy15191        175 --------------CHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSD---KT---------NGVHKR  227 (312)
Q Consensus       175 --------------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~---~~---------~~~~~~  227 (312)
                                    .-..-|+.|.+|.|.++|..++ ..|.|+.||+.............   ..         ...-.+
T Consensus       295 v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~G  374 (461)
T PF05694_consen  295 VEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRG  374 (461)
T ss_dssp             --SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S
T ss_pred             cCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCC
Confidence                          1134578999999999988766 57999999998865544432110   00         000222


Q ss_pred             eeEEEEEcCCCceEEEec
Q psy15191        228 IIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~  245 (312)
                      ...-+..|.||+.|...+
T Consensus       375 gPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  375 GPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             ----EEE-TTSSEEEEE-
T ss_pred             CCCeEEEccCCeEEEEEe
Confidence            345677888888776543

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.15  E-value=0.65  Score=38.84  Aligned_cols=195  Identities=14%  Similarity=0.097  Sum_probs=85.5

Q ss_pred             CceEEEEe-CCCcEEEEcCCCCcc--eeeeeeeecccC--CCccceeEEEECCCCCeEEEeec--C----Ce-EEEeccc
Q psy15191         99 QLHLLSCS-MDKSIIVWAPDPTTG--LWLETARVGEVG--GNTLGFYGCKFGPRGDYIIAHGF--Q----GS-LHLDVTT  166 (312)
Q Consensus        99 ~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~--~----~~-i~~d~~~  166 (312)
                      ..+|+..+ ..+.|+|.|+.+...  ...+.+....+.  ..-.....+..-|+|+.++++-.  +    |. +.+|-++
T Consensus        87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t  166 (461)
T PF05694_consen   87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET  166 (461)
T ss_dssp             S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred             CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence            34555544 778899999874322  222222211111  11123444556689988887532  1    23 4448888


Q ss_pred             Cceeeeeccc---CCceeEEEECCCCCEEEEEec--------------------CCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        167 WKQIQTLPCH---QLTITQLAFSPDDTHLVSVSR--------------------DRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       167 ~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~--------------------d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      +++.......   ...-..+-|.|..+.++|...                    ..++.+||+.+.+.++.+....    
T Consensus       167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~----  242 (461)
T PF05694_consen  167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGE----  242 (461)
T ss_dssp             --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-T----
T ss_pred             ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCC----
Confidence            8888766522   334567788888888887542                    3569999999999988887643    


Q ss_pred             ccceeeEEEEEcC--CCce-EEEeccCCeEEEEecCCCCCCcccccccccc--eeEEeec-----------------cCc
Q psy15191        224 VHKRIIWGVAWSH--DSRY-FLTISRDGVCVVWGLGEPPTEEDLVQNTLWP--EVQKLYG-----------------HGY  281 (312)
Q Consensus       224 ~~~~~v~~~~~~~--~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~-----------------~~~  281 (312)
                       ....+..+.|..  +..+ ++.+.-...|..|--....         .|+  .+..+..                 -..
T Consensus       243 -~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g---------~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~  312 (461)
T PF05694_consen  243 -EGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDG---------EWAAEKVIDIPAKKVEGWILPEMLKPFGAVPP  312 (461)
T ss_dssp             -TEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETT---------EEEEEEEEEE--EE--SS---GGGGGG-EE--
T ss_pred             -CCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCC---------CeeeeEEEECCCcccCcccccccccccccCCC
Confidence             223355666654  4444 3333344455555332111         122  1111111                 124


Q ss_pred             ceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        282 EIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       282 ~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      -|+++..|.|.++|-.++.    -+|.||.
T Consensus       313 LitDI~iSlDDrfLYvs~W----~~Gdvrq  338 (461)
T PF05694_consen  313 LITDILISLDDRFLYVSNW----LHGDVRQ  338 (461)
T ss_dssp             ----EEE-TTS-EEEEEET----TTTEEEE
T ss_pred             ceEeEEEccCCCEEEEEcc----cCCcEEE
Confidence            5799999999999987764    3444654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.10  E-value=0.88  Score=39.98  Aligned_cols=180  Identities=12%  Similarity=0.057  Sum_probs=98.8

Q ss_pred             EEEeCCCCceEEEEcccc-CcEEE---EEEecC-cCcCCCCceEEEecCCCcEEEeeecCCcccc------------ccc
Q psy15191         30 VKWNGEGGKVLYTLTNHK-SKVMA---VKWVLN-TSLDPEHKDLVSCSLDKTAILWKYVSEGNYL------------PYH   92 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~-~~v~~---~~~~~~-~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~------------~~~   92 (312)
                      .++|..+|+.+.++.... ..+..   ...... ..+  .+..++.++.|+.+.-.|..+++..-            +..
T Consensus        82 ~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~ts  159 (527)
T TIGR03075        82 YALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITA  159 (527)
T ss_pred             EEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccC
Confidence            345788888888775321 11111   100000 001  02356677788898888888877621            011


Q ss_pred             ccCCCCCceEEEEeC------CCcEEEEcCCCCcceeeeeeeeccc-------------C-----------CCccce-eE
Q psy15191         93 MRDDSKQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEV-------------G-----------GNTLGF-YG  141 (312)
Q Consensus        93 ~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~-------------~-----------~~~~~v-~~  141 (312)
                      .+.-.++ .++.+..      +|.|..+|.++++..+.........             .           .....+ ..
T Consensus       160 sP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~  238 (527)
T TIGR03075       160 APLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGT  238 (527)
T ss_pred             CcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCc
Confidence            1111122 4555432      6889999999977666533221100             0           001111 23


Q ss_pred             EEECCCCCeEEEeecC-----------------CeEEEecccCceeeeecccCCce---------eEEEECCCCC---EE
Q psy15191        142 CKFGPRGDYIIAHGFQ-----------------GSLHLDVTTWKQIQTLPCHQLTI---------TQLAFSPDDT---HL  192 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~-----------------~~i~~d~~~~~~~~~~~~~~~~v---------~~~~~~~~~~---~l  192 (312)
                      +++.|+..+++.+..+                 ..+-+|.++++++-.++.....+         .-+.+..+|+   .+
T Consensus       239 ~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v  318 (527)
T TIGR03075       239 GSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLL  318 (527)
T ss_pred             eeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEE
Confidence            4667766666665422                 23444999999887777221111         1222334665   77


Q ss_pred             EEEecCCeEEEEEccCCCeE
Q psy15191        193 VSVSRDRRWGLYKRQSSGRL  212 (312)
Q Consensus       193 ~~~~~d~~i~~wd~~~~~~~  212 (312)
                      +.+..+|.+++.|.++++.+
T Consensus       319 ~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       319 AHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             EEeCCCceEEEEECCCCcee
Confidence            78999999999999988775

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG3630|consensus

Probab=96.07  E-value=0.2  Score=46.47  Aligned_cols=143  Identities=8%  Similarity=-0.009  Sum_probs=88.4

Q ss_pred             cceeEEEECCCCCeEEEe-ecCCe-EEE-ecccCceeeee-----c------ccCCceeEEEECCCC-CEEEEEecCCeE
Q psy15191        137 LGFYGCKFGPRGDYIIAH-GFQGS-LHL-DVTTWKQIQTL-----P------CHQLTITQLAFSPDD-THLVSVSRDRRW  201 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~-~~~~~-i~~-d~~~~~~~~~~-----~------~~~~~v~~~~~~~~~-~~l~~~~~d~~i  201 (312)
                      .++..+...+|+...++. +.+|. |.. |+++.......     .      ....-..++.|+|.- ...+.+..|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            345667777777664443 33343 444 77765443311     1      122345677888843 245667789999


Q ss_pred             EEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec---
Q psy15191        202 GLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG---  278 (312)
Q Consensus       202 ~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---  278 (312)
                      ++..+........- .      ......++++|+|.|+.++.|-..|++.-|......             ...+.+   
T Consensus       181 ~V~~~~~~~~~v~s-~------p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~lei-------------k~~ip~Pp~  240 (1405)
T KOG3630|consen  181 RVKSTKQLAQNVTS-F------PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEI-------------KSEIPEPPV  240 (1405)
T ss_pred             hhhhhhhhhhhhcc-c------CcccceeeEEeccccceeeEecCCCeEEEeecccce-------------eecccCCCc
Confidence            98877643222111 1      145568899999999999999999999988654331             111111   


Q ss_pred             -cCcceeEEEeccCCCeEEEEe
Q psy15191        279 -HGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       279 -~~~~v~~~~~s~~~~~l~s~s  299 (312)
                       ....|.+|.|-....+|++-+
T Consensus       241 ~e~yrvl~v~Wl~t~eflvvy~  262 (1405)
T KOG3630|consen  241 EENYRVLSVTWLSTQEFLVVYG  262 (1405)
T ss_pred             CCCcceeEEEEecceeEEEEec
Confidence             146789999988777777643

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=95.84  E-value=0.76  Score=37.08  Aligned_cols=140  Identities=18%  Similarity=0.131  Sum_probs=74.0

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec-----c
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP-----C  175 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~-----~  175 (312)
                      ++.+--..+.|.-|+..+++.....         ....+.++..-..+..|+ ++..|..+++.+++..+..+.     .
T Consensus        39 L~w~DI~~~~i~r~~~~~g~~~~~~---------~p~~~~~~~~~d~~g~Lv-~~~~g~~~~~~~~~~~~t~~~~~~~~~  108 (307)
T COG3386          39 LLWVDILGGRIHRLDPETGKKRVFP---------SPGGFSSGALIDAGGRLI-ACEHGVRLLDPDTGGKITLLAEPEDGL  108 (307)
T ss_pred             EEEEeCCCCeEEEecCCcCceEEEE---------CCCCcccceeecCCCeEE-EEccccEEEeccCCceeEEeccccCCC
Confidence            4555556677888877653321111         111223333322333333 344454444444444422221     1


Q ss_pred             cCCceeEEEECCCCCEEEEEec-----C----CeEEEEEcc-CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSR-----D----RRWGLYKRQ-SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~-----d----~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      .....+.+...|+|.+.++...     .    ..-.+|-+. .......+..       +-..-+.++||||++.|+.+-
T Consensus       109 ~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~-------~~~~~NGla~SpDg~tly~aD  181 (307)
T COG3386         109 PLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDD-------DLTIPNGLAFSPDGKTLYVAD  181 (307)
T ss_pred             CcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecC-------cEEecCceEECCCCCEEEEEe
Confidence            2345678889999987665443     1    111344444 3444443332       344567899999998777665


Q ss_pred             c-CCeEEEEecCC
Q psy15191        246 R-DGVCVVWGLGE  257 (312)
Q Consensus       246 ~-dg~i~iwd~~~  257 (312)
                      . .+.|+.|++..
T Consensus       182 T~~~~i~r~~~d~  194 (307)
T COG3386         182 TPANRIHRYDLDP  194 (307)
T ss_pred             CCCCeEEEEecCc
Confidence            4 57888888763

>KOG1916|consensus

Probab=95.84  E-value=0.014  Score=52.23  Aligned_cols=98  Identities=19%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC---CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP---RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      |.+.+|+++--++.....+.+.....-...+.-+.|.|   +..++..+..++.+++ .... ..+..+.+|...+..++
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~r-a~~~l~rsHs~~~~d~a  231 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINR-ALRSLFRSHSQRVTDMA  231 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeech-HHHHHHHhcCCCcccHH
Confidence            67888988754444433333332222233334444444   5666777777888887 1111 11122334655554443


Q ss_pred             -----------ECCCCCEEEEEecCCeEEEEEcc
Q psy15191        185 -----------FSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       185 -----------~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                                 ++|||..|+.++.||.+++|.+.
T Consensus       232 ~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  232 FFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             HHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence                       57777777777777777777654

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=95.75  E-value=1  Score=37.86  Aligned_cols=146  Identities=12%  Similarity=0.192  Sum_probs=82.5

Q ss_pred             eeEEEECCCCCeEEEeecCCeEEE--ec-cc-CceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC----
Q psy15191        139 FYGCKFGPRGDYIIAHGFQGSLHL--DV-TT-WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG----  210 (312)
Q Consensus       139 v~~~~~~~~~~~l~~~~~~~~i~~--d~-~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----  210 (312)
                      ...+..++++.+++.+.. |.+..  |. .+ |+....-  ....+..+.+.+++..++++ .+|.+..- ...+.    
T Consensus       241 f~~v~~~~dG~~~~vg~~-G~~~~s~d~G~~~W~~~~~~--~~~~l~~v~~~~dg~l~l~g-~~G~l~~S-~d~G~~~~~  315 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSR-GNFYLTWEPGQPYWQPHNRA--SARRIQNMGWRADGGLWLLT-RGGGLYVS-KGTGLTEED  315 (398)
T ss_pred             eeeEEEcCCCCEEEEECC-ccEEEecCCCCcceEEecCC--CccceeeeeEcCCCCEEEEe-CCceEEEe-cCCCCcccc
Confidence            445567788876666544 44444  22 12 4544332  34568999999998877655 66665433 22222    


Q ss_pred             -eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        211 -RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       211 -~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                       .+......     .....+.++.|.+++..+++ +.+|.+..-.  .+        .+.|+.......-....+.+.|.
T Consensus       316 ~~f~~~~~~-----~~~~~l~~v~~~~d~~~~a~-G~~G~v~~s~--D~--------G~tW~~~~~~~~~~~~ly~v~f~  379 (398)
T PLN00033        316 FDFEEADIK-----SRGFGILDVGYRSKKEAWAA-GGSGILLRST--DG--------GKSWKRDKGADNIAANLYSVKFF  379 (398)
T ss_pred             cceeecccC-----CCCcceEEEEEcCCCcEEEE-ECCCcEEEeC--CC--------CcceeEccccCCCCcceeEEEEc
Confidence             12211110     02235888999988776655 4667555442  22        33444433223335678899998


Q ss_pred             cCCCeEEEEecCCCcccceEEe
Q psy15191        290 HDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       290 ~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      ++++.+++|      ++|.|.-
T Consensus       380 ~~~~g~~~G------~~G~il~  395 (398)
T PLN00033        380 DDKKGFVLG------NDGVLLR  395 (398)
T ss_pred             CCCceEEEe------CCcEEEE
Confidence            888777776      4555653

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.72  E-value=0.79  Score=36.39  Aligned_cols=141  Identities=11%  Similarity=0.064  Sum_probs=82.2

Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee---
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL---  173 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~---  173 (312)
                      .+..|+.|+.+| +.+++..... .....       .+..+|..+...|+-+.+++-+. +.+.+ ++.........   
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~-~~~~i-------~~~~~I~ql~vl~~~~~llvLsd-~~l~~~~L~~l~~~~~~~~~   75 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPS-KPTRI-------LKLSSITQLSVLPELNLLLVLSD-GQLYVYDLDSLEPVSTSAPL   75 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCc-cceeE-------eecceEEEEEEecccCEEEEEcC-CccEEEEchhhccccccccc
Confidence            345788888888 8888872211 11111       11223888999888777666544 77777 66555444311   


Q ss_pred             -----------cccCCceeEEE--ECCCCCEEEEEecCCeEEEEEccCC-----CeEEEEeccCCCCcccceeeEEEEEc
Q psy15191        174 -----------PCHQLTITQLA--FSPDDTHLVSVSRDRRWGLYKRQSS-----GRLSLVACSDKTNGVHKRIIWGVAWS  235 (312)
Q Consensus       174 -----------~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~~wd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~  235 (312)
                                 ......+...+  -...+...+.....+.|.+|.....     .....+.        ....+..++|.
T Consensus        76 ~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~--------lp~~~~~i~~~  147 (275)
T PF00780_consen   76 AFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS--------LPDPPSSIAFL  147 (275)
T ss_pred             cccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE--------cCCCcEEEEEe
Confidence                       11223344444  1124444445556668999988763     2333333        44567888997


Q ss_pred             CCCceEEEeccCCeEEEEecCCCC
Q psy15191        236 HDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       236 ~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                        ++.++.|..++ ..+.|+.++.
T Consensus       148 --~~~i~v~~~~~-f~~idl~~~~  168 (275)
T PF00780_consen  148 --GNKICVGTSKG-FYLIDLNTGS  168 (275)
T ss_pred             --CCEEEEEeCCc-eEEEecCCCC
Confidence              55677776555 7788888654

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1897|consensus

Probab=95.56  E-value=1.9  Score=39.76  Aligned_cols=102  Identities=17%  Similarity=0.165  Sum_probs=64.3

Q ss_pred             ceeEEEECCC-CCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC
Q psy15191        179 TITQLAFSPD-DTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD  247 (312)
Q Consensus       179 ~v~~~~~~~~-~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  247 (312)
                      .+.++.|..| +.+++.|+.          .|.|.+|.+...+.+..+....     -.+.+.++.-- +|++||+-  .
T Consensus       776 Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~-----v~Gav~aL~~f-ngkllA~I--n  847 (1096)
T KOG1897|consen  776 SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETV-----VKGAVYALVEF-NGKLLAGI--N  847 (1096)
T ss_pred             eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeee-----eccceeehhhh-CCeEEEec--C
Confidence            3455558777 667777653          4788888887744444433211     33444444322 67777644  4


Q ss_pred             CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ..|++|++....            .++.-..+..++..+...-.|..++.|..
T Consensus       848 ~~vrLye~t~~~------------eLr~e~~~~~~~~aL~l~v~gdeI~VgDl  888 (1096)
T KOG1897|consen  848 QSVRLYEWTTER------------ELRIECNISNPIIALDLQVKGDEIAVGDL  888 (1096)
T ss_pred             cEEEEEEccccc------------eehhhhcccCCeEEEEEEecCcEEEEeec
Confidence            589999987762            34444566777888888888888888843

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=95.54  E-value=0.68  Score=39.44  Aligned_cols=118  Identities=14%  Similarity=0.100  Sum_probs=62.5

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC------ceEEEec------
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS------RYFLTIS------  245 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~s~~------  245 (312)
                      .....|+|.||+++|++--..|.|++++..+.......................|+++|+-      .+|....      
T Consensus        30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~  109 (454)
T TIGR03606        30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGD  109 (454)
T ss_pred             CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCC
Confidence            4567899999998777665469999998654432222111111111134668899999874      2333321      


Q ss_pred             ----cCCeEEEEecCCCCCCcccccccccceeEEee---ccCcceeEEEeccCCCeEEEEecC
Q psy15191        246 ----RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY---GHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       246 ----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                          ....|.-|.+......  +...+  ..+..+.   .|.  -..|+|.|||.++++.+..
T Consensus       110 ~~~~~~~~I~R~~l~~~~~~--l~~~~--~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       110 KELPNHTKIVRYTYDKSTQT--LEKPV--DLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             CCccCCcEEEEEEecCCCCc--cccce--EEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence                1234444554322110  00000  0111121   233  3468899999988877654

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.52  E-value=0.9  Score=37.93  Aligned_cols=100  Identities=17%  Similarity=0.141  Sum_probs=54.3

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccC-----c---eeeeecc----cCCceeEEEECCCCCEEEEEecC------
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW-----K---QIQTLPC----HQLTITQLAFSPDDTHLVSVSRD------  198 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~-----~---~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d------  198 (312)
                      ....+++.+++  |+++......++ |...-     +   +...+..    +......++|.|||.+.++-+..      
T Consensus        73 ~p~Gi~~~~~G--lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~  150 (367)
T TIGR02604        73 MVTGLAVAVGG--VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVT  150 (367)
T ss_pred             CccceeEecCC--EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceec
Confidence            35778888888  444455555555 33210     1   1112221    23447789999999876655421      


Q ss_pred             -------------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC
Q psy15191        199 -------------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD  247 (312)
Q Consensus       199 -------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  247 (312)
                                   |.|.-++....+ ...+..       .......++|+|+|+++++-..+
T Consensus       151 ~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~-------G~rnp~Gl~~d~~G~l~~tdn~~  204 (367)
T TIGR02604       151 RPGTSDESRQGLGGGLFRYNPDGGK-LRVVAH-------GFQNPYGHSVDSWGDVFFCDNDD  204 (367)
T ss_pred             cCCCccCcccccCceEEEEecCCCe-EEEEec-------CcCCCccceECCCCCEEEEccCC
Confidence                         334444444322 222221       12234679999999988765433

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.50  E-value=0.12  Score=27.48  Aligned_cols=31  Identities=19%  Similarity=0.214  Sum_probs=25.2

Q ss_pred             CceeEEEECCCC---CEEEEEecCCeEEEEEccC
Q psy15191        178 LTITQLAFSPDD---THLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       178 ~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~  208 (312)
                      +.+.++.|+|+.   .+|+.+-.-+.+.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            468899999844   4777777779999999995

It contains a characteristic DLL sequence motif.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.41  E-value=1.5  Score=39.04  Aligned_cols=112  Identities=13%  Similarity=0.098  Sum_probs=68.6

Q ss_pred             eeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEEC--CCCCEEEEEecCCeEEEEEccC-----C
Q psy15191        139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFS--PDDTHLVSVSRDRRWGLYKRQS-----S  209 (312)
Q Consensus       139 v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~wd~~~-----~  209 (312)
                      +.-+.-+.-++..++-+....+.| |.+...+..... ...+.|.++.|.  |+++.+++.+..+.|.+|--..     .
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~  111 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNK  111 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcC
Confidence            334444555555555445556777 444443332222 357789999986  5899999999999999986421     1


Q ss_pred             ----CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        210 ----GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       210 ----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                          ..+..+.....    ...+|.+..|.++|.+++.++  +.+.|+|-.
T Consensus       112 ~p~w~~i~~i~i~~~----T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  112 GPSWAPIRKIDISSH----TPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             CcccceeEEEEeecC----CCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence                12222222111    335788999999998776553  468888643

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PHA03098 kelch-like protein; Provisional

Probab=95.33  E-value=1.5  Score=38.81  Aligned_cols=62  Identities=8%  Similarity=0.101  Sum_probs=30.9

Q ss_pred             CCCeEEEeecCCe-----EEE-e--cccCceeeeecccCCceeEEEECCCCCEEEEEecC------CeEEEEEccCCC
Q psy15191        147 RGDYIIAHGFQGS-----LHL-D--VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSG  210 (312)
Q Consensus       147 ~~~~l~~~~~~~~-----i~~-d--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~  210 (312)
                      +++.++.|+.++.     +.. |  ..+|.....+....... +++. -+++.++.|+.+      ..+..||..+.+
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~-~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~  417 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNP-CVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNK  417 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccc-eEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCe
Confidence            5677777776532     222 2  33455443333111111 1222 256666777632      457888887543

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.27  E-value=0.87  Score=41.39  Aligned_cols=84  Identities=14%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccCCC----------e--EEEEeccCCC-CcccceeeEEEEEcCC---Cce
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG----------R--LSLVACSDKT-NGVHKRIIWGVAWSHD---SRY  240 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----------~--~~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~  240 (312)
                      .-.|..+.++|+|.+++..|..|...+.=.+...          .  ...+...... .......|..+.|+|.   +..
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            3568999999999999998887654443222111          1  1111111111 1114567889999996   478


Q ss_pred             EEEeccCCeEEEEecCCCCC
Q psy15191        241 FLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       241 l~s~~~dg~i~iwd~~~~~~  260 (312)
                      |+.-..|+.+|+||+.....
T Consensus       164 l~vLtsdn~lR~y~~~~~~~  183 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISDPQH  183 (717)
T ss_pred             EEEEecCCEEEEEecCCCCC
Confidence            88899999999999976543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PHA03098 kelch-like protein; Provisional

Probab=95.24  E-value=2  Score=37.97  Aligned_cols=178  Identities=7%  Similarity=0.039  Sum_probs=82.2

Q ss_pred             CceEEEecCCC------cEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcceeee
Q psy15191         65 HKDLVSCSLDK------TAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLE  125 (312)
Q Consensus        65 ~~~l~s~~~dg------~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~  125 (312)
                      +..++.||.++      .+..||..+.....+...+.        .-++..++.|+.+     ..+..||..+.  .+..
T Consensus       295 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~  372 (534)
T PHA03098        295 NVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGES--KWRE  372 (534)
T ss_pred             CEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCC--ceee
Confidence            45677777543      46677776655422211110        1134455666654     34667777763  3322


Q ss_pred             eeeecccCCCccceeEEEECCCCCeEEEeecC------CeEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191        126 TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ------GSLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       126 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ..+   ++...... +++ .-+++.++.|+.+      ..+.. |+.  +|............. +++. .++..++.|+
T Consensus       373 ~~~---lp~~r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG  445 (534)
T PHA03098        373 EPP---LIFPRYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAIY-HDGKIYVIGG  445 (534)
T ss_pred             CCC---cCcCCccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEEE-ECCEEEEECC
Confidence            211   11111111 112 2356667777632      22333 543  566544433111111 2222 2556666666


Q ss_pred             cC--------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCC
Q psy15191        197 RD--------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEP  258 (312)
Q Consensus       197 ~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~  258 (312)
                      .+        ..+.+||..+.+-.. +.....    .......+.+  ++++++.|+.+     +.|.+||..+.
T Consensus       446 ~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        446 ISYIDNIKVYNIVESYNPVTNKWTE-LSSLNF----PRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             ccCCCCCcccceEEEecCCCCceee-CCCCCc----ccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence            43        237888887654322 211100    1111112222  67777777754     36778876654

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.08  E-value=0.81  Score=41.07  Aligned_cols=100  Identities=10%  Similarity=0.076  Sum_probs=65.5

Q ss_pred             CCCeEEEeecCCeEEEecccCceeee-----------------------e-cccCCceeEEEEC--CCCCEEEEEecCCe
Q psy15191        147 RGDYIIAHGFQGSLHLDVTTWKQIQT-----------------------L-PCHQLTITQLAFS--PDDTHLVSVSRDRR  200 (312)
Q Consensus       147 ~~~~l~~~~~~~~i~~d~~~~~~~~~-----------------------~-~~~~~~v~~~~~~--~~~~~l~~~~~d~~  200 (312)
                      ....|++|.+||.|.+    |.....                       + ......+.+++++  ...++||+++....
T Consensus       113 ~~EVLl~c~DdG~V~~----Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~  188 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLA----YYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQE  188 (717)
T ss_pred             CeeEEEEEecCCeEEE----EEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCce
Confidence            5567888899999888    321000                       0 0234467889998  77888888888888


Q ss_pred             EEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCC-----c-eEEEeccCCeEEEEec
Q psy15191        201 WGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDS-----R-YFLTISRDGVCVVWGL  255 (312)
Q Consensus       201 i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~-~l~s~~~dg~i~iwd~  255 (312)
                      |.||-.... .......     ...+...|.+|+|-++.     . .|++++-.|.+.+|++
T Consensus       189 VTVFaf~l~~~r~~~~~-----s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  189 VTVFAFALVDERFYHVP-----SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEEEEEecccccccccc-----ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            888876542 1111111     11155567888887643     2 7888899999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.05  E-value=0.14  Score=39.12  Aligned_cols=73  Identities=7%  Similarity=0.030  Sum_probs=49.4

Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc-------ccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG-------VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      +..++.+|++.+.+|.+++||+.+.+....-........       .....|..+.++.+|.-+++-+ +|..+.|+..-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            334788999999999999999998665432200000000       2456688899998998777665 57788898654


Q ss_pred             C
Q psy15191        258 P  258 (312)
Q Consensus       258 ~  258 (312)
                      .
T Consensus        97 ~   97 (219)
T PF07569_consen   97 G   97 (219)
T ss_pred             c
Confidence            3

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG3630|consensus

Probab=94.81  E-value=0.64  Score=43.39  Aligned_cols=137  Identities=11%  Similarity=0.070  Sum_probs=79.5

Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeee-ec---ccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccC-ceeeeec
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETAR-VG---EVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTW-KQIQTLP  174 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~-~~~~~~~  174 (312)
                      ++..+.+-.|..||+++-......+.. +.   ..........++.|+|.-. ..+++..|+.|++ .+..- .....+ 
T Consensus       117 v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~-  195 (1405)
T KOG3630|consen  117 VVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSF-  195 (1405)
T ss_pred             EEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhccc-
Confidence            333444456888998763322111111 00   0111223456778888543 3556677888877 11111 111111 


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      ......++++|+|.|+.++.|-..|++..|...- +....+.++...   ....|.+|+|-....+++.
T Consensus       196 p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~---e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  196 PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVE---ENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             CcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcC---CCcceeEEEEecceeEEEE
Confidence            2456789999999999999999999999998653 323333332221   3567999999877666654

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.64  E-value=0.17  Score=26.87  Aligned_cols=31  Identities=6%  Similarity=0.048  Sum_probs=25.7

Q ss_pred             eeEEEEEcCCC---ceEEEeccCCeEEEEecCCC
Q psy15191        228 IIWGVAWSHDS---RYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       228 ~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~  258 (312)
                      .+.++.|+|.+   .+|+-+-.-|.|.|+|++..
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            47889999855   48888888899999999853

It contains a characteristic DLL sequence motif.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=94.58  E-value=2.1  Score=35.04  Aligned_cols=156  Identities=18%  Similarity=0.167  Sum_probs=86.2

Q ss_pred             cceeEEEECCCCCeEEEeecCCe------EEE-eccc--C-----ceeee--ecccCC--------ceeEEEECCCCCEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGS------LHL-DVTT--W-----KQIQT--LPCHQL--------TITQLAFSPDDTHL  192 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~------i~~-d~~~--~-----~~~~~--~~~~~~--------~v~~~~~~~~~~~l  192 (312)
                      +.+..+.+.+++..+++.+++|.      +.. .+..  .     .....  +....+        ..-+|++.+++.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            45678888866666666666666      433 2111  1     00000  111111        34478887788877


Q ss_pred             EEEecC------CeEEEEEccCCCeEEEEeccCC--------CCcccceeeEEEEEcCCCceEEEecc-----CC--e--
Q psy15191        193 VSVSRD------RRWGLYKRQSSGRLSLVACSDK--------TNGVHKRIIWGVAWSHDSRYFLTISR-----DG--V--  249 (312)
Q Consensus       193 ~~~~~d------~~i~~wd~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg--~--  249 (312)
                      ++.-.+      ..|+.++.. +.....+..+..        .........-+++++|+|+.|+++.+     |+  .  
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~  178 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP  178 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence            776666      678888876 444444432221        11225667889999999996665543     22  1  


Q ss_pred             -----EEEEecCCCCCCcccccccccceeEEeec-----cCcceeEEEeccCCCeEEEE
Q psy15191        250 -----CVVWGLGEPPTEEDLVQNTLWPEVQKLYG-----HGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       250 -----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~  298 (312)
                           ++++.+........     ..+....+..     ....|..+.+-+++++|+--
T Consensus       179 ~~~~~~ri~~~d~~~~~~~-----~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLE  232 (326)
T PF13449_consen  179 DNGSPLRILRYDPKTPGEP-----VAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLE  232 (326)
T ss_pred             ccCceEEEEEecCCCCCcc-----ceEEEEeCCccccccCCCCceeEEEECCCcEEEEE
Confidence                 55655543321100     0012233332     45678899999999877653

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.51  E-value=2.7  Score=35.79  Aligned_cols=189  Identities=11%  Similarity=0.012  Sum_probs=93.0

Q ss_pred             EEEEecCcCcCCCCceEEEe-cCC----CcEEEeeecCCcccc-------cccccCCCCCceEEEEeCC-----------
Q psy15191         52 AVKWVLNTSLDPEHKDLVSC-SLD----KTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMD-----------  108 (312)
Q Consensus        52 ~~~~~~~~~~~~~~~~l~s~-~~d----g~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d-----------  108 (312)
                      ...++|+      ++++|-+ +..    ..+++.|+.+++.+.       .....+.+++..|+....+           
T Consensus       128 ~~~~Spd------g~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~  201 (414)
T PF02897_consen  128 GFSVSPD------GKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP  201 (414)
T ss_dssp             EEEETTT------SSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred             eeeECCC------CCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence            4556666      8887744 333    359999999987621       1114455665555544322           


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----CeEEE-ecccC-----ceeeeecccCC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----GSLHL-DVTTW-----KQIQTLPCHQL  178 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~-d~~~~-----~~~~~~~~~~~  178 (312)
                      ..|+.|.+.+....-...+.   ..........+..++++++++.....    ..+.+ +....     ..........+
T Consensus       202 ~~v~~~~~gt~~~~d~lvfe---~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~  278 (414)
T PF02897_consen  202 RQVYRHKLGTPQSEDELVFE---EPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDG  278 (414)
T ss_dssp             EEEEEEETTS-GGG-EEEEC----TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS
T ss_pred             cEEEEEECCCChHhCeeEEe---ecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCc
Confidence            23777787765433111111   11112225678899999997764432    33555 66653     22222222233


Q ss_pred             ceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCe--EE-EEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--eE
Q psy15191        179 TITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGR--LS-LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--VC  250 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~--~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i  250 (312)
                      ....+... .+.+++...   .++.|.-.++.....  .. .+....     ....+..+... .+.+++.-..++  .|
T Consensus       279 ~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~-----~~~~l~~~~~~-~~~Lvl~~~~~~~~~l  351 (414)
T PF02897_consen  279 VEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPED-----EDVSLEDVSLF-KDYLVLSYRENGSSRL  351 (414)
T ss_dssp             -EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--S-----SSEEEEEEEEE-TTEEEEEEEETTEEEE
T ss_pred             eEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCC-----CceeEEEEEEE-CCEEEEEEEECCccEE
Confidence            33334433 444444332   236677777776653  12 222210     11235555543 233444444555  68


Q ss_pred             EEEecC
Q psy15191        251 VVWGLG  256 (312)
Q Consensus       251 ~iwd~~  256 (312)
                      +++++.
T Consensus       352 ~v~~~~  357 (414)
T PF02897_consen  352 RVYDLD  357 (414)
T ss_dssp             EEEETT
T ss_pred             EEEECC
Confidence            888887

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=94.42  E-value=1.9  Score=33.71  Aligned_cols=188  Identities=12%  Similarity=0.100  Sum_probs=107.2

Q ss_pred             eEEEEcccc--CcEEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCcccccccccCC--------CCCceEEEEe
Q psy15191         39 VLYTLTNHK--SKVMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNYLPYHMRDD--------SKQLHLLSCS  106 (312)
Q Consensus        39 ~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~~~~~~~~~--------~~~~~l~~~~  106 (312)
                      .+.++. |.  .-.-.+.|..+      +.++-+.+.-|  .|+.+|+.+++.......+..        -+.....-.-
T Consensus        35 vv~~yp-Hd~~aFTQGL~~~~~------g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTW  107 (264)
T PF05096_consen   35 VVETYP-HDPTAFTQGLEFLDD------GTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTW  107 (264)
T ss_dssp             EEEEEE---TT-EEEEEEEEET------TEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEES
T ss_pred             EEEECC-CCCcccCccEEecCC------CEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEe
Confidence            445554 33  33456777666      77888888766  689999999876433332221        1222445566


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc-----CCce
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH-----QLTI  180 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~-----~~~v  180 (312)
                      .++...+||..+.+  .+.++.   ..   ..=+.++  .+++.|+.......+.+ |..+.+....+.-.     -..+
T Consensus       108 k~~~~f~yd~~tl~--~~~~~~---y~---~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~L  177 (264)
T PF05096_consen  108 KEGTGFVYDPNTLK--KIGTFP---YP---GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNL  177 (264)
T ss_dssp             SSSEEEEEETTTTE--EEEEEE----S---SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---E
T ss_pred             cCCeEEEEccccce--EEEEEe---cC---CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCc
Confidence            78889999998743  233332   11   2335566  56777777776777777 98888887776521     2346


Q ss_pred             eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC--------cccceeeEEEEEcCCCceE-EEe
Q psy15191        181 TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN--------GVHKRIIWGVAWSHDSRYF-LTI  244 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l-~s~  244 (312)
                      +.+.|- +|...|=.=....|...|..++.....+....-..        .....-.+.+|+.|....| ++|
T Consensus       178 NELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  178 NELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             EEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            667775 56555555566778888888887766654321110        0023458899998876544 444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG4460|consensus

Probab=94.35  E-value=3  Score=35.80  Aligned_cols=93  Identities=17%  Similarity=0.327  Sum_probs=55.4

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  215 (312)
                      -.|..+..++.|..++..+.+|.+.+ -.+.|-....++.....|+|=.+.-+. .|++.+                   
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~-~~ftss-------------------  163 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAE-RFFTSS-------------------  163 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccc-eeeccC-------------------
Confidence            35778889999999999999998877 334444444444333334443332222 222221                   


Q ss_pred             eccCCCCcccceeeEEEEEcCCC---ceEEEeccCCeEEEEecCCC
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDS---RYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~  258 (312)
                               ..-.+..++|+|+.   ..|..-+.|+.||+||+...
T Consensus       164 ---------~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~  200 (741)
T KOG4460|consen  164 ---------TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP  200 (741)
T ss_pred             ---------CceeeeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence                     00113346777765   45666677888888887665

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=94.28  E-value=1.2  Score=37.53  Aligned_cols=80  Identities=13%  Similarity=0.065  Sum_probs=52.2

Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC--------------Cc-eE
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD--------------SR-YF  241 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------~~-~l  241 (312)
                      .-.+.+++.+|++++.++...=|.|.++|+.+...++..++.......   .+....-...              .. ++
T Consensus       307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~---wi~~~~~~~~~~~~~~~~~~~~~~~l~Lv  383 (415)
T PF14655_consen  307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCG---WIEVPEEGDRDRSNSNSPKSSSRFALFLV  383 (415)
T ss_pred             CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEE---EEEeecccccccccccccCCCCcceEEEE
Confidence            345788999999988887766699999999998877777765433111   1111100000              11 34


Q ss_pred             EEeccCCeEEEEecCCCC
Q psy15191        242 LTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       242 ~s~~~dg~i~iwd~~~~~  259 (312)
                      +-+-..|.|.||.++.+.
T Consensus       384 IyaprRg~lEvW~~~~g~  401 (415)
T PF14655_consen  384 IYAPRRGILEVWSMRQGP  401 (415)
T ss_pred             EEeccCCeEEEEecCCCC
Confidence            466778899999987764

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.16  E-value=1.7  Score=37.14  Aligned_cols=137  Identities=8%  Similarity=0.022  Sum_probs=76.9

Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC--------CeEEEeecCCeEEEecccCc--eee
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG--------DYIIAHGFQGSLHLDVTTWK--QIQ  171 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~l~~~~~~~~i~~d~~~~~--~~~  171 (312)
                      +..+.....++-.|++.++  .+....     -+.. + -+.|.|..        +.|+--+..+..+||++-.-  +..
T Consensus       483 ~~dg~~~~kLykmDIErGk--vveeW~-----~~dd-v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v  553 (776)
T COG5167         483 YLDGGERDKLYKMDIERGK--VVEEWD-----LKDD-V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV  553 (776)
T ss_pred             EecCCCcccceeeecccce--eeeEee-----cCCc-c-eeecCCchhHHhcCccceEEeecccceEEecccccCCceee
Confidence            3445555556666666533  222222     1122 2 35666642        34555566777777544322  111


Q ss_pred             e-ec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        172 T-LP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       172 ~-~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      . ..  .......+..-. ...+++.++..|-|++||.-..+....+++       ....|..+..+.+|+++++.+.. 
T Consensus       554 ~esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~-------lG~aIk~idvta~Gk~ilaTCk~-  624 (776)
T COG5167         554 VESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPG-------LGDAIKHIDVTANGKHILATCKN-  624 (776)
T ss_pred             eeehhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCcc-------cccceeeeEeecCCcEEEEeecc-
Confidence            1 11  122223333322 345899999999999999765444333333       55668889999999988877654 


Q ss_pred             eEEEEecC
Q psy15191        249 VCVVWGLG  256 (312)
Q Consensus       249 ~i~iwd~~  256 (312)
                      .+.+-|+.
T Consensus       625 yllL~d~~  632 (776)
T COG5167         625 YLLLTDVP  632 (776)
T ss_pred             eEEEEecc
Confidence            46666664

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=93.86  E-value=3.8  Score=35.12  Aligned_cols=108  Identities=18%  Similarity=0.210  Sum_probs=57.5

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCce--eeeec-----ccCCceeEEEECCCC------CEEEEEe------
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ--IQTLP-----CHQLTITQLAFSPDD------THLVSVS------  196 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~--~~~~~-----~~~~~v~~~~~~~~~------~~l~~~~------  196 (312)
                      ...+.|+|.|+++.|++--..|.|++ +..+...  ...+.     ........|+++|+-      .+|+...      
T Consensus        30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~  109 (454)
T TIGR03606        30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGD  109 (454)
T ss_pred             CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCC
Confidence            44688999999986665444688877 4433321  11111     135678999999874      2343332      


Q ss_pred             ----cCCeEEEEEccCC-----CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC
Q psy15191        197 ----RDRRWGLYKRQSS-----GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD  247 (312)
Q Consensus       197 ----~d~~i~~wd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  247 (312)
                          ....|.-|.+...     .....+..... ...|.  -..++|.|||.++++.+..
T Consensus       110 ~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~-~~~H~--GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       110 KELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPA-GNDHN--GGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             CCccCCcEEEEEEecCCCCccccceEEEecCCC-CCCcC--CceEEECCCCcEEEEECCC
Confidence                1223444544321     11112221111 11133  3368899999977766554

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PHA02790 Kelch-like protein; Provisional

Probab=93.51  E-value=4.1  Score=35.47  Aligned_cols=133  Identities=10%  Similarity=0.038  Sum_probs=63.2

Q ss_pred             CCCCeEEEeecCC--eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEecCC---eEEEEEccCCCeEEEEec
Q psy15191        146 PRGDYIIAHGFQG--SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR---RWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       146 ~~~~~l~~~~~~~--~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~  217 (312)
                      -++...++|+.++  .+.. |.  .+|.....+.........+.+  +|+..+.|+.++   .+..||.++.+- .....
T Consensus       317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~W-~~~~~  393 (480)
T PHA02790        317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHDQW-QFGPS  393 (480)
T ss_pred             ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCCEE-EeCCC
Confidence            3677777777643  2333 33  235544444322222222222  577777777553   466788765432 22111


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  297 (312)
                      ...    .......+  .-++++.+.|+   .+.+||..+.          .|..+..+....... +++ --+|+..+.
T Consensus       394 m~~----~r~~~~~~--~~~~~IYv~GG---~~e~ydp~~~----------~W~~~~~m~~~r~~~-~~~-v~~~~IYvi  452 (480)
T PHA02790        394 TYY----PHYKSCAL--VFGRRLFLVGR---NAEFYCESSN----------TWTLIDDPIYPRDNP-ELI-IVDNKLLLI  452 (480)
T ss_pred             CCC----ccccceEE--EECCEEEEECC---ceEEecCCCC----------cEeEcCCCCCCcccc-EEE-EECCEEEEE
Confidence            110    11111122  23667667664   4667776443          455444443222222 222 247788888


Q ss_pred             EecCC
Q psy15191        298 ACKAT  302 (312)
Q Consensus       298 ~s~d~  302 (312)
                      ||.++
T Consensus       453 GG~~~  457 (480)
T PHA02790        453 GGFYR  457 (480)
T ss_pred             CCcCC
Confidence            87653

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=93.45  E-value=2.7  Score=35.96  Aligned_cols=136  Identities=18%  Similarity=0.206  Sum_probs=77.6

Q ss_pred             CCCCeEEE-eecCCeEEE-ecccCceeeeecccCCceeEEEECCC--------CCEEEEEecCCeEEEEEccCCC-eEEE
Q psy15191        146 PRGDYIIA-HGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD--------DTHLVSVSRDRRWGLYKRQSSG-RLSL  214 (312)
Q Consensus       146 ~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~l~~~~~d~~i~~wd~~~~~-~~~~  214 (312)
                      .+..+++. |+....++- |++-++++....-|...  -+.|.|+        .+.|+ |-.+..|.-.|.+-.. .+..
T Consensus       477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi~v  553 (776)
T COG5167         477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKIKV  553 (776)
T ss_pred             CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCceee
Confidence            34444443 333333433 88888888877756554  5677774        23343 4455556555655333 2322


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                      .......   ......+..- -...|+|.++..|.|++||--...            .-..+.+-...|..+..+.+|++
T Consensus       554 ~esKdY~---tKn~Fss~~t-TesGyIa~as~kGDirLyDRig~r------------AKtalP~lG~aIk~idvta~Gk~  617 (776)
T COG5167         554 VESKDYK---TKNKFSSGMT-TESGYIAAASRKGDIRLYDRIGKR------------AKTALPGLGDAIKHIDVTANGKH  617 (776)
T ss_pred             eeehhcc---cccccccccc-ccCceEEEecCCCceeeehhhcch------------hhhcCcccccceeeeEeecCCcE
Confidence            2211111   1111112222 245689999999999999854331            12234566778999999999998


Q ss_pred             EEEEec
Q psy15191        295 LASACK  300 (312)
Q Consensus       295 l~s~s~  300 (312)
                      +++.+.
T Consensus       618 ilaTCk  623 (776)
T COG5167         618 ILATCK  623 (776)
T ss_pred             EEEeec
Confidence            887764

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=93.40  E-value=4.4  Score=34.37  Aligned_cols=59  Identities=10%  Similarity=0.086  Sum_probs=41.1

Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      ..++..-+.||.+.+|+-+...-...+..     ....+   .+++.|....|++++.+..|.-|..
T Consensus       145 ~~~IcVQS~DG~L~~feqe~~~f~~~lp~-----~llPg---Pl~Y~~~tDsfvt~sss~~l~~Yky  203 (418)
T PF14727_consen  145 RDFICVQSMDGSLSFFEQESFAFSRFLPD-----FLLPG---PLCYCPRTDSFVTASSSWTLECYKY  203 (418)
T ss_pred             ceEEEEEecCceEEEEeCCcEEEEEEcCC-----CCCCc---CeEEeecCCEEEEecCceeEEEecH
Confidence            35788889999999999775332222221     11333   3678888888999998888888875

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.36  E-value=0.51  Score=36.02  Aligned_cols=36  Identities=17%  Similarity=0.358  Sum_probs=21.9

Q ss_pred             ccceeEEEECCCCCeEEEeecCCeEEE---ecccCceeee
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQT  172 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~~~~~  172 (312)
                      ...|..+.++.+|.-+++-+. |..+.   ++..|-.+..
T Consensus        66 ~~~i~~~~lt~~G~PiV~lsn-g~~y~y~~~L~~W~~vsd  104 (219)
T PF07569_consen   66 SPNITSCSLTSNGVPIVTLSN-GDSYSYSPDLGCWIRVSD  104 (219)
T ss_pred             CCcEEEEEEcCCCCEEEEEeC-CCEEEeccccceeEEecc
Confidence            345777778877776665443 44444   6666665543

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG1900|consensus

Probab=93.35  E-value=3.9  Score=39.15  Aligned_cols=75  Identities=13%  Similarity=0.178  Sum_probs=52.5

Q ss_pred             CccceeEEEECCCCCeEEEeecCCeEEE---ecccCceee-------------------eec-ccCCceeEEEECCCCCE
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQ-------------------TLP-CHQLTITQLAFSPDDTH  191 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~~~~-------------------~~~-~~~~~v~~~~~~~~~~~  191 (312)
                      ....|.++....+|+.+++|-.++...+   -...|--.+                   .+. .+..+|..|+.....+.
T Consensus       177 dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~I  256 (1311)
T KOG1900|consen  177 DGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNI  256 (1311)
T ss_pred             CCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccce
Confidence            3556888998888988777666544333   222332110                   011 45678999999988888


Q ss_pred             EEEEecCCeEEEEEccCC
Q psy15191        192 LVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~  209 (312)
                      +.+-++.++|.+||+...
T Consensus       257 lY~lsek~~v~~Y~i~~~  274 (1311)
T KOG1900|consen  257 LYVLSEKGTVSAYDIGGN  274 (1311)
T ss_pred             eeeeccCceEEEEEccCC
Confidence            999999999999999873

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=93.12  E-value=0.94  Score=38.14  Aligned_cols=93  Identities=11%  Similarity=0.020  Sum_probs=55.0

Q ss_pred             EEEECCCCCEEEEEecCCeEEE---EEccC-C----CeEEEEeccCCCCcccceeeEEEEEcC-----------CCceEE
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGL---YKRQS-S----GRLSLVACSDKTNGVHKRIIWGVAWSH-----------DSRYFL  242 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~---wd~~~-~----~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~~~l~  242 (312)
                      .++.+|+++.|+.+..+..+.+   |+... .    .......+.....  ....|+++.+-|           |...++
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~--~~e~ITsi~clpl~s~~~s~~~~dw~~I~   83 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDE--PGECITSILCLPLSSQKRSTGGPDWTCIA   83 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCC--CCCEEEEEEEEEeecccccCCCCCcEEEE
Confidence            4678899999999987777655   64421 1    1112222221111  124677666533           457899


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                      .|..+|.|++|.....             .+..-.-|..+|..+...
T Consensus        84 VG~ssG~vrfyte~G~-------------LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   84 VGTSSGYVRFYTENGV-------------LLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             EEecccEEEEEeccch-------------HHHHHhcCccceEEEEec
Confidence            9999999999975332             233333356666666553

>KOG4499|consensus

Probab=93.01  E-value=3.2  Score=31.71  Aligned_cols=87  Identities=18%  Similarity=0.145  Sum_probs=56.4

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC----CccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG----NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC  175 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~  175 (312)
                      +.++-+.+-.|.-||.+-..+.......+..+..    .....-.++...+|++.+++-..+.|.. |+.+++++.++.-
T Consensus       172 fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl  251 (310)
T KOG4499|consen  172 FYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKL  251 (310)
T ss_pred             EEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEc
Confidence            4455566777877885443333222211111111    1122344666778888888888888777 9999999999887


Q ss_pred             cCCceeEEEECC
Q psy15191        176 HQLTITQLAFSP  187 (312)
Q Consensus       176 ~~~~v~~~~~~~  187 (312)
                      ....|++++|-.
T Consensus       252 Pt~qitsccFgG  263 (310)
T KOG4499|consen  252 PTPQITSCCFGG  263 (310)
T ss_pred             CCCceEEEEecC
Confidence            789999999964

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=92.83  E-value=2.4  Score=38.22  Aligned_cols=112  Identities=11%  Similarity=0.020  Sum_probs=67.1

Q ss_pred             CCCCEEEEEecCCeEEEEEccCCC--------eEEE----EeccCCCCcccceeeEEEEEc--CCCceEEEeccCCeEEE
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSG--------RLSL----VACSDKTNGVHKRIIWGVAWS--HDSRYFLTISRDGVCVV  252 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~--------~~~~----~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~i  252 (312)
                      -+...|+.|..||.|.+|.+.+-.        ....    ..............+++++++  ...++||.++....|.|
T Consensus       112 g~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV  191 (717)
T PF08728_consen  112 GGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTV  191 (717)
T ss_pred             CCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEE
Confidence            366788999999999999764310        0000    000001111145578899998  78889999888888888


Q ss_pred             EecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-----C-eEEEEecCCCcccceEEeC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-----T-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-----~-~l~s~s~d~~~~dg~i~iW  312 (312)
                      |-+.......         ....-..|...|-+|+|-++.     . +|++++-     .|.+.+|
T Consensus       192 Faf~l~~~r~---------~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI-----~G~v~~~  243 (717)
T PF08728_consen  192 FAFALVDERF---------YHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDI-----SGEVWTF  243 (717)
T ss_pred             EEEecccccc---------ccccccccccCCCeeEeecCCCCCccceEEEEEec-----cCcEEEE
Confidence            8766532111         011111266778899997653     2 6777744     4446654

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=92.80  E-value=0.39  Score=24.87  Aligned_cols=23  Identities=22%  Similarity=-0.012  Sum_probs=17.0

Q ss_pred             cCcceeEEEeccCCCeEEEEecC
Q psy15191        279 HGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      ....-...+|||||+.|+-.+..
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~   29 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNR   29 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEEC
T ss_pred             CCccccCEEEecCCCEEEEEecC
Confidence            34556788999999999988754

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=92.76  E-value=3.2  Score=31.08  Aligned_cols=136  Identities=12%  Similarity=0.104  Sum_probs=60.7

Q ss_pred             CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc
Q psy15191        157 QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS  235 (312)
Q Consensus       157 ~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  235 (312)
                      +|.... |..+.+....+. ..+.-..++  .|+..|+.+.....++.-|..+......+.......  .-..++.+.|-
T Consensus       110 egvaf~~d~~t~~~lg~~~-y~GeGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~--pv~~LNELE~V  184 (262)
T COG3823         110 EGVAFKYDADTLEELGRFS-YEGEGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGV--PVSKLNELEWV  184 (262)
T ss_pred             cceeEEEChHHhhhhcccc-cCCcceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCe--ecccccceeee
Confidence            444434 777776666554 334444554  355667776666677777766544333332211110  11122333332


Q ss_pred             CCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEE
Q psy15191        236 HDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASA  298 (312)
Q Consensus       236 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~  298 (312)
                       +|...|-.-.+..|...|..++....-.....+-+.+..-..|....+.+|+.|++ ++++||
T Consensus       185 -dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         185 -DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             -ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence             34333322222223333333321110000000001122222355678899999987 666665

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=92.49  E-value=4.7  Score=32.35  Aligned_cols=63  Identities=19%  Similarity=0.138  Sum_probs=41.7

Q ss_pred             eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeecc---CcceeEEEecc--CCCeEEEEe
Q psy15191        228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH---GYEIYSLAASH--DGTLLASAC  299 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~--~~~~l~s~s  299 (312)
                      ....++++++|.++++--..+.|..|+...+-..+.         +..+...   -..+.++++.+  +|.+.+..+
T Consensus       187 ~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~---------~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn  254 (287)
T PF03022_consen  187 QSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPEN---------FEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN  254 (287)
T ss_dssp             SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCC---------EEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred             CCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccc---------hheeEEcCceeeccceeeeccccCceEEEEEC
Confidence            455788999999999999999999999876432211         2222211   24678899999  888777664

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>KOG1916|consensus

Probab=92.42  E-value=0.055  Score=48.64  Aligned_cols=115  Identities=13%  Similarity=0.068  Sum_probs=65.2

Q ss_pred             ccCCceeEEEECC-CCCEEEEEecCCeEEEEEccC--CCeEEEEec-cCCCCcccceeeEEEEEcC---CCceEEEeccC
Q psy15191        175 CHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQS--SGRLSLVAC-SDKTNGVHKRIIWGVAWSH---DSRYFLTISRD  247 (312)
Q Consensus       175 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~--~~~~~~~~~-~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~d  247 (312)
                      +..+.+-.+.|-. +...+.  -.-|.+.+||+.-  ++....+.. ....   ....+.-+.|.|   +.-++..+-.+
T Consensus       130 gf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p---~gs~~~~V~wcp~~~~~~~ic~~~~~  204 (1283)
T KOG1916|consen  130 GFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITP---YGSDPQLVSWCPIAVNKVYICYGLKG  204 (1283)
T ss_pred             cCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCc---CCCCcceeeecccccccceeeeccCC
Confidence            5566777777743 222222  3347788998764  111111111 1111   222334455554   56677777788


Q ss_pred             CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEE-----------eccCCCeEEEEecCCCcccceEEeC
Q psy15191        248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA-----------ASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----------~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.|++..+...             ....+.+|+..+..++           .||||..+|.++.||.     +++|
T Consensus       205 ~~i~lL~~~ra-------------~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~-----v~f~  262 (1283)
T KOG1916|consen  205 GEIRLLNINRA-------------LRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGS-----VGFY  262 (1283)
T ss_pred             CceeEeeechH-------------HHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCc-----ccee
Confidence            88888766554             1223345666655543           5899999999977666     7665

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=92.36  E-value=4.5  Score=31.79  Aligned_cols=168  Identities=12%  Similarity=0.064  Sum_probs=100.6

Q ss_pred             CCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE
Q psy15191         74 DKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA  153 (312)
Q Consensus        74 dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  153 (312)
                      ++....|-+..+..  ...+.-.+++..-+++...+.|--.|..+++...   .+    .+.......+...|||..-++
T Consensus        50 ~~s~~~fpvp~G~a--p~dvapapdG~VWft~qg~gaiGhLdP~tGev~~---yp----Lg~Ga~Phgiv~gpdg~~Wit  120 (353)
T COG4257          50 DGSSAEFPVPNGSA--PFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVET---YP----LGSGASPHGIVVGPDGSAWIT  120 (353)
T ss_pred             CCccceeccCCCCC--ccccccCCCCceEEecCccccceecCCCCCceEE---Ee----cCCCCCCceEEECCCCCeeEe
Confidence            45555555544432  2233345666677777777777777777755322   22    134455677888999987666


Q ss_pred             eecCCeEEEecccCceeee---ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeE
Q psy15191        154 HGFQGSLHLDVTTWKQIQT---LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW  230 (312)
Q Consensus       154 ~~~~~~i~~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~  230 (312)
                      -+.....++|.++.+..+-   ............|.+.|++-+++.. |.---.|-. ...+..+..+      .....+
T Consensus       121 d~~~aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa-~~~i~vfpaP------qG~gpy  192 (353)
T COG4257         121 DTGLAIGRLDPKTLEVTRFPLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPA-RNVISVFPAP------QGGGPY  192 (353)
T ss_pred             cCcceeEEecCcccceEEeecccccCCCcccceeeCCCccEEEeecc-ccceecCcc-cCceeeeccC------CCCCCc
Confidence            5555667776666554432   1233566788999999998888752 211111111 1112222222      333456


Q ss_pred             EEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        231 GVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       231 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      .++..|+|...++.-.++.|-..|...+
T Consensus       193 Gi~atpdGsvwyaslagnaiaridp~~~  220 (353)
T COG4257         193 GICATPDGSVWYASLAGNAIARIDPFAG  220 (353)
T ss_pred             ceEECCCCcEEEEeccccceEEcccccC
Confidence            7899999998888777777777776665

>PRK10115 protease 2; Provisional

Probab=92.17  E-value=9.4  Score=35.06  Aligned_cols=145  Identities=6%  Similarity=-0.034  Sum_probs=0.0

Q ss_pred             eeEEEECCCCCeEE-----EeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC------eEEEEEc
Q psy15191        139 FYGCKFGPRGDYII-----AHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR------RWGLYKR  206 (312)
Q Consensus       139 v~~~~~~~~~~~l~-----~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~~wd~  206 (312)
                      +..+.++|++++|+     .|++...+++ |+.+.+.+........  ..++|++|++.|+....+.      .|+.+++
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l  206 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI  206 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC


Q ss_pred             cCC--CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC---eEEEEecCCCCCCcccccccccceeEEeeccCc
Q psy15191        207 QSS--GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG---VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY  281 (312)
Q Consensus       207 ~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (312)
                      .+.  +....+...      .......+..+.++++++..+..+   .+.+++......           ....+..+..
T Consensus       207 gt~~~~d~lv~~e~------~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~  269 (686)
T PRK10115        207 GTPASQDELVYEEK------DDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADA-----------EPFVFLPRRK  269 (686)
T ss_pred             CCChhHCeEEEeeC------CCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCC-----------CceEEEECCC


Q ss_pred             ceeEEEeccCCCeEEEEecCC
Q psy15191        282 EIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       282 ~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      .+.--..+..+.+++....+.
T Consensus       270 ~~~~~~~~~~~~ly~~tn~~~  290 (686)
T PRK10115        270 DHEYSLDHYQHRFYLRSNRHG  290 (686)
T ss_pred             CCEEEEEeCCCEEEEEEcCCC

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=92.01  E-value=5.1  Score=33.85  Aligned_cols=158  Identities=15%  Similarity=0.032  Sum_probs=83.1

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCC---------------CCCceEEEEeC
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD---------------SKQLHLLSCSM  107 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~  107 (312)
                      +..-...|..+-..|+      |+.|..-+. .++.++++.+...........+               ..+..++..+.
T Consensus       216 L~~~~~~v~qllL~Pd------g~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~  288 (733)
T COG4590         216 LSVPFSDVSQLLLTPD------GKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHE  288 (733)
T ss_pred             cCCCccchHhhEECCC------CCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcC
Confidence            4334455666666666      877665444 5788888876543211111111               23346788899


Q ss_pred             CCcEEEE-cCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191        108 DKSIIVW-APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAF  185 (312)
Q Consensus       108 d~~i~i~-d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~  185 (312)
                      ||.|.-| |.+..........+...+.  ..++..+.-..+.+-+++-+.+|.+.. ....-+..- ++.--..+.-+++
T Consensus       289 dG~vsQWFdvr~~~~p~l~h~R~f~l~--pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL-~~~~~~~~~~~~~  365 (733)
T COG4590         289 DGLVSQWFDVRRDGQPHLNHIRNFKLA--PAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL-FERAYQAPQLVAM  365 (733)
T ss_pred             CCceeeeeeeecCCCCcceeeeccccC--cccceeeccccccceEEEEcCCCceeeeecccCccee-hhhhhcCcceeee
Confidence            9998877 4444322222222211111  112222222223344666666777666 111111111 1112235667899


Q ss_pred             CCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      ||++.++++- ..|.|+++.+++..+
T Consensus       366 Sp~~~~Ll~e-~~gki~~~~l~Nr~P  390 (733)
T COG4590         366 SPNQAYLLSE-DQGKIRLAQLENRNP  390 (733)
T ss_pred             Ccccchheee-cCCceEEEEecCCCC
Confidence            9999988764 567899998886544

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=91.96  E-value=4.1  Score=30.53  Aligned_cols=169  Identities=12%  Similarity=0.118  Sum_probs=88.1

Q ss_pred             CceEEEecCC--CcEEEeeecCCcccccccccC--------CCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccC
Q psy15191         65 HKDLVSCSLD--KTAILWKYVSEGNYLPYHMRD--------DSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVG  133 (312)
Q Consensus        65 ~~~l~s~~~d--g~i~vw~~~~~~~~~~~~~~~--------~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  133 (312)
                      |.++.+.+.-  ..|++||+.+++.......+.        ..-+ ...+-.-.+|.-..+|.++.+..-  ..   .+ 
T Consensus        56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg--~~---~y-  129 (262)
T COG3823          56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELG--RF---SY-  129 (262)
T ss_pred             CEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhc--cc---cc-
Confidence            5667776654  369999999887643222220        0011 123334566777777777633211  11   11 


Q ss_pred             CCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc-----CCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH-----QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                        ++.=+.++  .+++.|+.+.....+++ |.++.......+-.     -..++.+.|- ||...+-.=.+..|-.-|..
T Consensus       130 --~GeGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~  204 (262)
T COG3823         130 --EGEGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPD  204 (262)
T ss_pred             --CCcceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCC
Confidence              11223333  45666777666667777 88777665554411     1223344442 55555444444555555666


Q ss_pred             CCCeEEEEeccCCCC-----cccceeeEEEEEcCCC-ceEEEe
Q psy15191        208 SSGRLSLVACSDKTN-----GVHKRIIWGVAWSHDS-RYFLTI  244 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~-~~l~s~  244 (312)
                      +++....+....-..     ..+..-.+.+++.|++ +++++|
T Consensus       205 sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         205 SGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             CCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            655554444322111     1144457788998887 455554

>KOG2377|consensus

Probab=91.95  E-value=4.6  Score=34.11  Aligned_cols=100  Identities=11%  Similarity=0.164  Sum_probs=61.5

Q ss_pred             CccceeEEEECCCCCeEEEeecCCeEEE-ec----ccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DV----TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      ..++|.++.|++|.+.+++--.+..|.+ +.    .........+..+..|....|+.+ .-++..+..| +.+|.....
T Consensus        65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe  142 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE  142 (657)
T ss_pred             CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence            3458999999999999999988998888 22    111111222234456889999865 4566555444 666655432


Q ss_pred             C-eEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        210 G-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       210 ~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      + .++..+.       ++..|+=..|.|+.+.+..
T Consensus       143 krslRlVks-------~~~nvnWy~yc~et~v~LL  170 (657)
T KOG2377|consen  143 KRSLRLVKS-------HNLNVNWYMYCPETAVILL  170 (657)
T ss_pred             hhhhhhhhh-------cccCccEEEEccccceEee
Confidence            2 2222222       5556777778887775443

>KOG2280|consensus

Probab=91.56  E-value=10  Score=34.28  Aligned_cols=42  Identities=14%  Similarity=0.231  Sum_probs=34.6

Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      ...+..+..||+.++|+.-...|.|.+-+....+.+..+...
T Consensus       216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~  257 (829)
T KOG2280|consen  216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCT  257 (829)
T ss_pred             CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCC
Confidence            366888999999999999999999999988877766665543

>PRK13684 Ycf48-like protein; Provisional

Probab=91.16  E-value=7.6  Score=32.00  Aligned_cols=128  Identities=14%  Similarity=0.155  Sum_probs=71.1

Q ss_pred             EEeecCCeEEE--e-cccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee
Q psy15191        152 IAHGFQGSLHL--D-VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       152 ~~~~~~~~i~~--d-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  228 (312)
                      ..++..|.+..  | -++|.....-.  ...+..+.+.|++.+++++ ..|.+..-.-...+........      ....
T Consensus       146 ~~~g~~G~i~~S~DgG~tW~~~~~~~--~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~gg~tW~~~~~~------~~~~  216 (334)
T PRK13684        146 EMATNVGAIYRTTDGGKNWEALVEDA--AGVVRNLRRSPDGKYVAVS-SRGNFYSTWEPGQTAWTPHQRN------SSRR  216 (334)
T ss_pred             eeeeccceEEEECCCCCCceeCcCCC--cceEEEEEECCCCeEEEEe-CCceEEEEcCCCCCeEEEeeCC------Cccc
Confidence            34455666655  3 46787654432  4578899999988766554 5665543211112223333221      4456


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ++++.+.|+++.++.+ ..|.+++=....         ...|+.+..- ......+.++++.|++..++++
T Consensus       217 l~~i~~~~~g~~~~vg-~~G~~~~~s~d~---------G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G  277 (334)
T PRK13684        217 LQSMGFQPDGNLWMLA-RGGQIRFNDPDD---------LESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG  277 (334)
T ss_pred             ceeeeEcCCCCEEEEe-cCCEEEEccCCC---------CCccccccCCccccccceeeEEEcCCCCEEEEc
Confidence            8899999999877665 557654211222         2233322111 1122457788999888766655

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=91.11  E-value=2.2  Score=31.20  Aligned_cols=29  Identities=17%  Similarity=0.272  Sum_probs=18.8

Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ..+++||.||++.+.+  +..|.|.+...+.
T Consensus         7 ~~~l~WS~Dg~laV~t--~~~v~IL~~~~P~   35 (173)
T PF12657_consen    7 PNALAWSEDGQLAVAT--GESVHILDPQTPN   35 (173)
T ss_pred             CcCeeECCCCCEEEEc--CCeEEEEeccCCc
Confidence            4579999999755543  3357777554443

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=90.83  E-value=9.3  Score=32.47  Aligned_cols=139  Identities=17%  Similarity=0.199  Sum_probs=74.2

Q ss_pred             CceEEEecCCCcEEEeeecCCcc---------------cccccccC-CCCCceEEEEeCCCcEEEEcCCCCcce------
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGL------  122 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~------  122 (312)
                      ...++.||..|.++||+......               +.+....+ +......++.-.-+.+.+|.+....+.      
T Consensus        37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~  116 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQ  116 (418)
T ss_pred             ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcE
Confidence            56899999999999999865442               12222222 111223444456677778877432221      


Q ss_pred             -eeeeeeecccCCCccceeEEEECC----C-CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191        123 -WLETARVGEVGGNTLGFYGCKFGP----R-GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       123 -~~~~~~~~~~~~~~~~v~~~~~~~----~-~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  195 (312)
                       .+.......+.   .....++.-|    . ..++.+=+-||.+.+ +-+..-....+.. .--...+.|.+.-+.|+++
T Consensus       117 ~~L~~~yeh~l~---~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~  192 (418)
T PF14727_consen  117 YQLELIYEHSLQ---RTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTA  192 (418)
T ss_pred             EEEEEEEEEecc---cceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEe
Confidence             11111111111   1223333333    2 356777788999988 4333333333321 1122346677777778888


Q ss_pred             ecCCeEEEEEcc
Q psy15191        196 SRDRRWGLYKRQ  207 (312)
Q Consensus       196 ~~d~~i~~wd~~  207 (312)
                      +.+..+..|...
T Consensus       193 sss~~l~~Yky~  204 (418)
T PF14727_consen  193 SSSWTLECYKYQ  204 (418)
T ss_pred             cCceeEEEecHH
Confidence            777777777653

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=90.74  E-value=4.3  Score=36.04  Aligned_cols=74  Identities=23%  Similarity=0.291  Sum_probs=42.6

Q ss_pred             CCCCEEEEEecCCeEEEEEccC----CCeEEEEeccCCC---------------CcccceeeEEEEEcC----CCceEEE
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQS----SGRLSLVACSDKT---------------NGVHKRIIWGVAWSH----DSRYFLT  243 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~----~~~~~~~~~~~~~---------------~~~~~~~v~~~~~~~----~~~~l~s  243 (312)
                      ++...++.+..||.+.......    .............               ..........++.++    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4667788888999988887764    1222211111110               000233455666666    6789999


Q ss_pred             eccCCeEEEEecCCCCC
Q psy15191        244 ISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~~~  260 (312)
                      .+.|+.+|+||+.++..
T Consensus       236 l~~D~~LRiW~l~t~~~  252 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQC  252 (547)
T ss_dssp             EETTSEEEEEETTTTCE
T ss_pred             EeCCCeEEEEECCCCeE
Confidence            99999999999998865

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=90.60  E-value=8.5  Score=31.60  Aligned_cols=124  Identities=15%  Similarity=0.137  Sum_probs=66.8

Q ss_pred             CCceeEEEECCCCCEEEEEecCCe------EEEEEccCC----CeEEEE-----eccCCCCc-ccceeeEEEEEcCCCce
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRR------WGLYKRQSS----GRLSLV-----ACSDKTNG-VHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~------i~~wd~~~~----~~~~~~-----~~~~~~~~-~~~~~v~~~~~~~~~~~  240 (312)
                      -+.+..|.+.|++..+++.+.+|.      +..+++...    ..+...     ........ ......-++++.+++.+
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~   98 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF   98 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence            456788999876667777788877      666665531    111111     11100000 01113446788788888


Q ss_pred             EEEeccC------CeEEEEecCCCCCCcccccccccceeE---EeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        241 FLTISRD------GVCVVWGLGEPPTEEDLVQNTLWPEVQ---KLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       241 l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      +++.-.+      ..|+.++.. +.....+.....+....   .-.......-+|+++|+|+.|.++...
T Consensus        99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~  167 (326)
T PF13449_consen   99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMES  167 (326)
T ss_pred             EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECc
Confidence            8877666      778888765 32222110000000000   111234568899999999977776543

>PHA02790 Kelch-like protein; Provisional

Probab=90.51  E-value=11  Score=32.86  Aligned_cols=131  Identities=9%  Similarity=0.005  Sum_probs=60.8

Q ss_pred             CceEEEecCCC--cEEEeeecCCcccccccccC--------CCCCceEEEEeCCC---cEEEEcCCCCcceeeeeeeecc
Q psy15191         65 HKDLVSCSLDK--TAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMDK---SIIVWAPDPTTGLWLETARVGE  131 (312)
Q Consensus        65 ~~~l~s~~~dg--~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~  131 (312)
                      +.+.+.||.++  .+..||..++....+..++.        .-++...+.|+.++   .+..||.++  ..+....+.  
T Consensus       319 ~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~--~~W~~~~~m--  394 (480)
T PHA02790        319 NKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNH--DQWQFGPST--  394 (480)
T ss_pred             CEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCC--CEEEeCCCC--
Confidence            56778887643  57778766544322111111        12333455555443   356777765  333322111  


Q ss_pred             cCCCccceeEEEECCCCCeEEEeecCCeEEE---ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-----CeEEE
Q psy15191        132 VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-----RRWGL  203 (312)
Q Consensus       132 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~  203 (312)
                       ....... ++ ..-+++..+.|+.   +..   +..+|.....+.........+.+  +++..+.|+.+     ..+..
T Consensus       395 -~~~r~~~-~~-~~~~~~IYv~GG~---~e~ydp~~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~~~~~~~~ve~  466 (480)
T PHA02790        395 -YYPHYKS-CA-LVFGRRLFLVGRN---AEFYCESSNTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFYRGSYIDTIEV  466 (480)
T ss_pred             -CCccccc-eE-EEECCEEEEECCc---eEEecCCCCcEeEcCCCCCCccccEEEEE--CCEEEEECCcCCCcccceEEE
Confidence             1111111 11 2235566666642   333   45567766554422222222222  56777777754     23555


Q ss_pred             EEcc
Q psy15191        204 YKRQ  207 (312)
Q Consensus       204 wd~~  207 (312)
                      ||..
T Consensus       467 Yd~~  470 (480)
T PHA02790        467 YNNR  470 (480)
T ss_pred             EECC
Confidence            5554

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=90.47  E-value=7.9  Score=31.02  Aligned_cols=199  Identities=16%  Similarity=0.128  Sum_probs=99.8

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC------Ccccccc-----------------ccc---C--C---
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS------EGNYLPY-----------------HMR---D--D---   96 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~------~~~~~~~-----------------~~~---~--~---   96 (312)
                      ..-+.|+++|.      +.+-++...-+...+||...      .+.+.+.                 +..   +  .   
T Consensus        23 ~N~WGia~~p~------~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g   96 (336)
T TIGR03118        23 RNAWGLSYRPG------GPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEG   96 (336)
T ss_pred             cccceeEecCC------CCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCC
Confidence            34578888887      77777777778888998861      1111100                 000   0  0   


Q ss_pred             -CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc-eeEEEEC--CCCCeEEEee-cCCeEEEecccCceee
Q psy15191         97 -SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG-FYGCKFG--PRGDYIIAHG-FQGSLHLDVTTWKQIQ  171 (312)
Q Consensus        97 -~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~--~~~~~l~~~~-~~~~i~~d~~~~~~~~  171 (312)
                       .....++.+++||+|.-|...-............. ...... ...+++.  ..+.+|+.+. ..++|.+--.++....
T Consensus        97 ~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d-~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~  175 (336)
T TIGR03118        97 ITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVD-ASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPP  175 (336)
T ss_pred             cccceeEEEEeCCceEEeecCcCCcccccccEEEEc-cCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcccccc
Confidence             01125788999999999986432220000000000 011122 2344444  3355655544 5667777111122211


Q ss_pred             eecccCCc-------------------eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191        172 TLPCHQLT-------------------ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       172 ~~~~~~~~-------------------v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                      .-....++                   |+-..-.++...=+.+..-|.|-+||+. +..++.+....     .-...+.|
T Consensus       176 ~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g-----~LNaPWG~  249 (336)
T TIGR03118       176 LPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSG-----RLNAPWGL  249 (336)
T ss_pred             CCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCC-----cccCCcee
Confidence            10000011                   1111112222222223334689999987 45555443221     22345667


Q ss_pred             EEcC------CCceEEEeccCCeEEEEecCCCC
Q psy15191        233 AWSH------DSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       233 ~~~~------~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +..|      .+.+|+.---||+|..||..++.
T Consensus       250 a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~  282 (336)
T TIGR03118       250 AIAPESFGSLSGALLVGNFGDGTINAYDPQSGA  282 (336)
T ss_pred             eeChhhhCCCCCCeEEeecCCceeEEecCCCCc
Confidence            7755      56777776779999999987764

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=90.01  E-value=11  Score=31.93  Aligned_cols=66  Identities=17%  Similarity=0.210  Sum_probs=44.4

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE---ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLY  204 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w  204 (312)
                      ..+.++.|.+++..++ ++..|.+..   .-++|+.......-...++.+.|.++++.+++ +.+|.|.-|
T Consensus       328 ~~l~~v~~~~d~~~~a-~G~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~il~~  396 (398)
T PLN00033        328 FGILDVGYRSKKEAWA-AGGSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGVLLRY  396 (398)
T ss_pred             cceEEEEEcCCCcEEE-EECCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEE-eCCcEEEEe
Confidence            4588899988777554 556676666   55677776543334567889999877665655 567876544

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=89.92  E-value=3.6  Score=26.22  Aligned_cols=42  Identities=19%  Similarity=0.105  Sum_probs=27.1

Q ss_pred             eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      +..+|.+.-||..++             ....+...-.-.+.|+.++|+++|+.+
T Consensus        33 ~~~~GRll~ydp~t~-------------~~~vl~~~L~fpNGVals~d~~~vlv~   74 (89)
T PF03088_consen   33 GRPTGRLLRYDPSTK-------------ETTVLLDGLYFPNGVALSPDESFVLVA   74 (89)
T ss_dssp             T---EEEEEEETTTT-------------EEEEEEEEESSEEEEEE-TTSSEEEEE
T ss_pred             CCCCcCEEEEECCCC-------------eEEEehhCCCccCeEEEcCCCCEEEEE
Confidence            445677888888776             344444434456899999999977776

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>KOG2247|consensus

Probab=89.35  E-value=0.039  Score=46.03  Aligned_cols=136  Identities=14%  Similarity=0.158  Sum_probs=87.2

Q ss_pred             eeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEE-EecCCeEEEEEccCCCeEEEEe
Q psy15191        139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS-VSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       139 v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      .....|-|.+.-++.++.+..+.. |-. .+..... ..++....|+|..++..++. +-..+.+.+||+.+...-+.-.
T Consensus        37 pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~  114 (615)
T KOG2247|consen   37 PIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES  114 (615)
T ss_pred             cceeeEecCCCceehhhhhhHHHhhhhh-cceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence            345677787777888777766666 222 1111112 23455667888887776554 5567899999998643322211


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeE
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLL  295 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l  295 (312)
                      +..     +....  +.|++.+..++.+...|.+.|++.....             .....| |...++.+++.+.+..+
T Consensus       115 gg~-----~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR-------------~iiv~Gkh~RRgtq~av~lEd~vi  174 (615)
T KOG2247|consen  115 GGT-----SSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSR-------------RIIVMGKHQRRGTQIAVTLEDYVI  174 (615)
T ss_pred             cCc-----chHHH--HhhccCCccccccccccceEEEeccchh-------------hhhhhcccccceeEEEecccceee
Confidence            111     22222  6899999999999999999999876652             222234 88889999999886544


Q ss_pred             E
Q psy15191        296 A  296 (312)
Q Consensus       296 ~  296 (312)
                      .
T Consensus       175 l  175 (615)
T KOG2247|consen  175 L  175 (615)
T ss_pred             e
Confidence            3

>KOG3616|consensus

Probab=89.20  E-value=10  Score=34.42  Aligned_cols=63  Identities=13%  Similarity=0.233  Sum_probs=42.0

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCC-----CceEEEEeCCCcEEEEcC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSK-----QLHLLSCSMDKSIIVWAP  116 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~-----~~~l~~~~~d~~i~i~d~  116 (312)
                      .-++++.-+|.      ++-++++..||.|++++........+.-....+.     +.-+++...|+.+.-|.-
T Consensus        15 e~~~aiqshp~------~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhgl~~~tsdrr~la~~~   82 (1636)
T KOG3616|consen   15 EFTTAIQSHPG------GQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHGLVTATSDRRALAWKE   82 (1636)
T ss_pred             ceeeeeeecCC------CceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccceEEEeccchhheeec
Confidence            34667777777      8999999999999999987766533322222211     112667777777777753

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=88.98  E-value=3.6  Score=36.58  Aligned_cols=40  Identities=28%  Similarity=0.391  Sum_probs=29.8

Q ss_pred             CceeEEEECC----CCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        178 LTITQLAFSP----DDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       178 ~~v~~~~~~~----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      ..+..+++++    +..++++.+.|+.+|+||+.+...+.....
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~  258 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATIDL  258 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEET
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence            3455666666    778999999999999999999998666544

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=88.90  E-value=2.1  Score=22.27  Aligned_cols=31  Identities=13%  Similarity=0.240  Sum_probs=22.4

Q ss_pred             CCCCEEEEEe-cCCeEEEEEccCCCeEEEEec
Q psy15191        187 PDDTHLVSVS-RDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       187 ~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      |++++|+++. .++.|.++|..+.+....+..
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence            5677666655 578999999987776665553

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=88.72  E-value=6.4  Score=28.81  Aligned_cols=31  Identities=16%  Similarity=0.349  Sum_probs=25.5

Q ss_pred             eeeEEEEEcCCC------ceEEEeccCCeEEEEecCC
Q psy15191        227 RIIWGVAWSHDS------RYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       227 ~~v~~~~~~~~~------~~l~s~~~dg~i~iwd~~~  257 (312)
                      ..+.+++|||.|      -+|++.+.+|.|.||.-..
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            468899999954      3788899999999997654

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=88.52  E-value=11  Score=29.82  Aligned_cols=194  Identities=9%  Similarity=-0.088  Sum_probs=107.2

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC-CCCCceEEEEeCCCcEEEEcCCC------Ccc
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD-DSKQLHLLSCSMDKSIIVWAPDP------TTG  121 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~------~~~  121 (312)
                      .-..++-.|+      |..-+++...+.|--.|..+++....-.... +|   +.+..+.||...|-|...      .+.
T Consensus        63 ap~dvapapd------G~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~P---hgiv~gpdg~~Witd~~~aI~R~dpkt  133 (353)
T COG4257          63 APFDVAPAPD------GAVWFTAQGTGAIGHLDPATGEVETYPLGSGASP---HGIVVGPDGSAWITDTGLAIGRLDPKT  133 (353)
T ss_pred             CccccccCCC------CceEEecCccccceecCCCCCceEEEecCCCCCC---ceEEECCCCCeeEecCcceeEEecCcc
Confidence            3445555555      8777887777777777777766522211111 11   334444444444433221      001


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeE
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW  201 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  201 (312)
                      ....++++. ............|.+.|++-+++...-.=++|..+..+..--......-+.|+..|||..-++.-.+..|
T Consensus       134 ~evt~f~lp-~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnai  212 (353)
T COG4257         134 LEVTRFPLP-LEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQGGGPYGICATPDGSVWYASLAGNAI  212 (353)
T ss_pred             cceEEeecc-cccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCCCCCCcceEECCCCcEEEEeccccce
Confidence            112222221 2234556788899999998887764333344444333222111234556789999999988887777778


Q ss_pred             EEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        202 GLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       202 ~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      -..|...... ..+..+..    ....-..+--+|.|+.-++....+.+..||-..
T Consensus       213 aridp~~~~a-ev~p~P~~----~~~gsRriwsdpig~~wittwg~g~l~rfdPs~  263 (353)
T COG4257         213 ARIDPFAGHA-EVVPQPNA----LKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSV  263 (353)
T ss_pred             EEcccccCCc-ceecCCCc----ccccccccccCccCcEEEeccCCceeeEeCccc
Confidence            7777765532 22332221    112233445567888888877777777776543

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=88.05  E-value=9.7  Score=28.80  Aligned_cols=50  Identities=14%  Similarity=0.134  Sum_probs=32.9

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF  156 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  156 (312)
                      .|+.+.....|.+|++..........+.      .-+.|..+.++..|+++++--.
T Consensus        30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~------Tv~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   30 ALFVAASGCKVEVYDLEQEECPLLCTFS------TVGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             eEEEEcCCCEEEEEEcccCCCceeEEEc------chhheeEEEeccccceEEEEEe
Confidence            4444466677888888854444444433      2356888889888998887543

>KOG4659|consensus

Probab=87.98  E-value=28  Score=34.06  Aligned_cols=24  Identities=25%  Similarity=0.335  Sum_probs=18.5

Q ss_pred             ccCcceeEEEeccCCCeEEEEecC
Q psy15191        278 GHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       278 ~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      +|-..+.++|.+|||..+++-+.+
T Consensus       659 A~lnsp~alaVsPdg~v~IAD~gN  682 (1899)
T KOG4659|consen  659 AKLNSPYALAVSPDGDVIIADSGN  682 (1899)
T ss_pred             cccCCcceEEECCCCcEEEecCCc
Confidence            455678899999999988776443

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=87.98  E-value=5.1  Score=25.52  Aligned_cols=42  Identities=21%  Similarity=0.147  Sum_probs=27.7

Q ss_pred             EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        195 VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                      +..+|.+.-||..+++....+..        -...+.++++||+.+++.+
T Consensus        33 ~~~~GRll~ydp~t~~~~vl~~~--------L~fpNGVals~d~~~vlv~   74 (89)
T PF03088_consen   33 GRPTGRLLRYDPSTKETTVLLDG--------LYFPNGVALSPDESFVLVA   74 (89)
T ss_dssp             T---EEEEEEETTTTEEEEEEEE--------ESSEEEEEE-TTSSEEEEE
T ss_pred             CCCCcCEEEEECCCCeEEEehhC--------CCccCeEEEcCCCCEEEEE
Confidence            34467888999988766555553        2346789999999977655

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=87.46  E-value=16  Score=30.60  Aligned_cols=193  Identities=15%  Similarity=0.166  Sum_probs=98.9

Q ss_pred             CCCceEEEecCCCcEEEeeecCCccccc----------cc-ccCC-CCCceEEEEeCC---CcEEEEcCCCCcceeeeee
Q psy15191         63 PEHKDLVSCSLDKTAILWKYVSEGNYLP----------YH-MRDD-SKQLHLLSCSMD---KSIIVWAPDPTTGLWLETA  127 (312)
Q Consensus        63 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~----------~~-~~~~-~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~  127 (312)
                      |...+++...+++-+.+||++......+          .. .... ..-.++++..++   ..|++|.+....+......
T Consensus        66 p~kSlIigTdK~~GL~VYdL~Gk~lq~~~~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~  145 (381)
T PF02333_consen   66 PAKSLIIGTDKKGGLYVYDLDGKELQSLPVGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVT  145 (381)
T ss_dssp             GGG-EEEEEETTTEEEEEETTS-EEEEE-SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-C
T ss_pred             cccceEEEEeCCCCEEEEcCCCcEEEeecCCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcC
Confidence            4456788888888999999987654211          10 0001 111123333332   4699997764333221111


Q ss_pred             e-ecccCCCccceeEEEEC--C-CCC-eEEEeecCCeEEE----ecccC----ceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        128 R-VGEVGGNTLGFYGCKFG--P-RGD-YIIAHGFQGSLHL----DVTTW----KQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       128 ~-~~~~~~~~~~v~~~~~~--~-~~~-~l~~~~~~~~i~~----d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      . ...+......++.+|+.  | +|. ++++...+|.+..    +..++    ++++.+. -...+..+.......+|+.
T Consensus       146 ~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~-~~sQ~EGCVVDDe~g~LYv  224 (381)
T PF02333_consen  146 DPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFK-VGSQPEGCVVDDETGRLYV  224 (381)
T ss_dssp             BTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEEEETTTTEEEE
T ss_pred             CCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEec-CCCcceEEEEecccCCEEE
Confidence            0 00111222346777763  3 455 4556677887655    22222    3344454 3457888888887788999


Q ss_pred             EecCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEEc--CCC-ceEE-EeccCCeEEEEecCCC
Q psy15191        195 VSRDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAWS--HDS-RYFL-TISRDGVCVVWGLGEP  258 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~-s~~~dg~i~iwd~~~~  258 (312)
                      +-++.-|.-|+.+...  ....+......  .....|-.+++-  +++ .||+ |.-.++...||+....
T Consensus       225 gEE~~GIW~y~Aep~~~~~~~~v~~~~g~--~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  225 GEEDVGIWRYDAEPEGGNDRTLVASADGD--GLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             EETTTEEEEEESSCCC-S--EEEEEBSSS--SB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred             ecCccEEEEEecCCCCCCcceeeeccccc--ccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            9999888888876322  11222111111  133456667664  343 3554 4446779999998754

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=87.35  E-value=7.2  Score=29.46  Aligned_cols=54  Identities=15%  Similarity=0.147  Sum_probs=37.0

Q ss_pred             ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ..|..+...+.|.+|++.....          +.+..+.. -+.|..+.++..|++|+|-=.+..
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~----------~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~   82 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEEC----------PLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNK   82 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCC----------ceeEEEcc-hhheeEEEeccccceEEEEEeecC
Confidence            3444446677899999984322          14455543 378899999999999999754443

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]

Probab=87.28  E-value=25  Score=32.79  Aligned_cols=73  Identities=14%  Similarity=0.133  Sum_probs=46.7

Q ss_pred             cceeEEEECCCCCeEEEeecCCeE-EE---ecccCceeee-------------------ecccCCceeEEEECCCCCEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSL-HL---DVTTWKQIQT-------------------LPCHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i-~~---d~~~~~~~~~-------------------~~~~~~~v~~~~~~~~~~~l~  193 (312)
                      ..|.++.-+.+|+.+++|..|-.+ .+   -.+.|-....                   +.-|...|..++.......|.
T Consensus       182 inV~civs~e~GrIFf~g~~d~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqsRg~ly  261 (1263)
T COG5308         182 INVRCIVSEEDGRIFFGGENDPNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQSRGLLY  261 (1263)
T ss_pred             ceeEEEEeccCCcEEEecCCCCCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeeccccccee
Confidence            457888888889999888877222 22   2222311100                   013556788888887777777


Q ss_pred             EEecCCeEEEEEccCC
Q psy15191        194 SVSRDRRWGLYKRQSS  209 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~  209 (312)
                      +-+....|+-|.+...
T Consensus       262 ~Lr~kS~Vray~itkn  277 (1263)
T COG5308         262 VLRKKSAVRAYSITKN  277 (1263)
T ss_pred             eecccceeeeEeeecc
Confidence            7777788888877653

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=86.40  E-value=8.8  Score=35.71  Aligned_cols=80  Identities=11%  Similarity=0.086  Sum_probs=50.2

Q ss_pred             CCeEEEEEccCCCeEEE-EeccCCCCcccceeeEEEEEcCCCceEEE-eccCC-----eEEEEecCCCCCCccccccccc
Q psy15191        198 DRRWGLYKRQSSGRLSL-VACSDKTNGVHKRIIWGVAWSHDSRYFLT-ISRDG-----VCVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg-----~i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      .+.|.+-|......... +.        +..+|..-+|||||+.||- .+.++     .|++-++.+....         
T Consensus       328 ~~~L~~~D~dG~n~~~ve~~--------~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~---------  390 (912)
T TIGR02171       328 TGNLAYIDYTKGASRAVEIE--------DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSG---------  390 (912)
T ss_pred             CCeEEEEecCCCCceEEEec--------CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCC---------
Confidence            35777878775444433 33        6677888999999999987 44444     5888888876542         


Q ss_pred             ceeEEeeccCcceeEEEeccCCCeEE
Q psy15191        271 PEVQKLYGHGYEIYSLAASHDGTLLA  296 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~~~~s~~~~~l~  296 (312)
                        +.++.-....|-.-...++|...+
T Consensus       391 --~vkl~ve~aaiprwrv~e~gdt~i  414 (912)
T TIGR02171       391 --LVKLPVENAAIPRWRVLENGDTVI  414 (912)
T ss_pred             --ceEeecccccccceEecCCCCeEE
Confidence              233333344555555556665433

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=85.92  E-value=5.4  Score=33.72  Aligned_cols=149  Identities=15%  Similarity=0.074  Sum_probs=78.3

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC-Ccccee-EEEECCCCCeEEEeecCCeEEE--ecccCceee
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG-NTLGFY-GCKFGPRGDYIIAHGFQGSLHL--DVTTWKQIQ  171 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~~~  171 (312)
                      .|++..+..-+. .++.++++.+......+-.  ...++ ....|. .+..-..|..++++..||.+.-  |.+...   
T Consensus       229 ~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~--~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~---  302 (733)
T COG4590         229 TPDGKTLYVRTG-SELVVALLDKRSLQIRKLV--DDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDG---  302 (733)
T ss_pred             CCCCCEEEEecC-CeEEEEeecccccchhhhh--hcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecCC---
Confidence            566666655554 6788888776332111100  00011 011122 1122234556778888887765  333222   


Q ss_pred             eecccCCceeEEEECC----------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE
Q psy15191        172 TLPCHQLTITQLAFSP----------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF  241 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~----------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  241 (312)
                        ..|-..+....+.|          +.+-+++-..+|++.++.....+.+....        .-..+.-+++||++.+|
T Consensus       303 --~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~--------~~~~~~~~~~Sp~~~~L  372 (733)
T COG4590         303 --QPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER--------AYQAPQLVAMSPNQAYL  372 (733)
T ss_pred             --CCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh--------hhcCcceeeeCcccchh
Confidence              12222233333332          34456667777877777654433332211        22235568999999999


Q ss_pred             EEeccCCeEEEEecCCCCCC
Q psy15191        242 LTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       242 ~s~~~dg~i~iwd~~~~~~~  261 (312)
                      ++- ..|.++++.+++...+
T Consensus       373 l~e-~~gki~~~~l~Nr~Pe  391 (733)
T COG4590         373 LSE-DQGKIRLAQLENRNPE  391 (733)
T ss_pred             eee-cCCceEEEEecCCCCC
Confidence            864 4567999999877543

>PLN02153 epithiospecifier protein

Probab=85.69  E-value=19  Score=29.76  Aligned_cols=17  Identities=18%  Similarity=0.075  Sum_probs=10.4

Q ss_pred             EEeccCCCeEEEEecCC
Q psy15191        286 LAASHDGTLLASACKAT  302 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~d~  302 (312)
                      +...-+++.++.|+.+.
T Consensus       309 ~~v~~~~~~~~~gG~~~  325 (341)
T PLN02153        309 ATVYGKNGLLMHGGKLP  325 (341)
T ss_pred             cccCCcceEEEEcCcCC
Confidence            33444557888887654

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=85.40  E-value=2.7  Score=19.85  Aligned_cols=25  Identities=24%  Similarity=0.276  Sum_probs=17.9

Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ..+++.+++|+++++=+....|++|
T Consensus         4 P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    4 PHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CcEEEEeCCCCEEEEECCCCEEEEC
Confidence            4567777888877777777777654

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>KOG1900|consensus

Probab=85.23  E-value=7.7  Score=37.34  Aligned_cols=80  Identities=14%  Similarity=0.253  Sum_probs=51.6

Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEcc--CCCe-----EE-----------EEeccCCCCcccceeeEEEEEcCCC
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ--SSGR-----LS-----------LVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~-----~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                      ...|+++....+|+.|++| .||.|  |.+.  ...-     ..           .++........+..+|..++.....
T Consensus       178 g~~V~~I~~t~nGRIF~~G-~dg~l--yEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR  254 (1311)
T KOG1900|consen  178 GVSVNCITYTENGRIFFAG-RDGNL--YELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSR  254 (1311)
T ss_pred             CceEEEEEeccCCcEEEee-cCCCE--EEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccc
Confidence            5578899988899877765 56644  4332  1000     00           0000001111267789999998888


Q ss_pred             ceEEEeccCCeEEEEecCCCC
Q psy15191        239 RYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ..+.+-++.|.|.+||+....
T Consensus       255 ~IlY~lsek~~v~~Y~i~~~G  275 (1311)
T KOG1900|consen  255 NILYVLSEKGTVSAYDIGGNG  275 (1311)
T ss_pred             ceeeeeccCceEEEEEccCCC
Confidence            899999999999999998744

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=84.96  E-value=33  Score=31.98  Aligned_cols=185  Identities=11%  Similarity=0.072  Sum_probs=98.5

Q ss_pred             EEEeCCCCceEEEEccccCc--------EEEEEEecC--cCc--------CCCCceEEEecCCCcEEEeeecCCcccccc
Q psy15191         30 VKWNGEGGKVLYTLTNHKSK--------VMAVKWVLN--TSL--------DPEHKDLVSCSLDKTAILWKYVSEGNYLPY   91 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~--------v~~~~~~~~--~~~--------~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~   91 (312)
                      ++.|..+|+.+.++.-....        ...+.+...  ...        ...+..++.++.|+.+.-.|.++++..-.+
T Consensus       207 ~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~f  286 (764)
T TIGR03074       207 IALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTGKLCEDF  286 (764)
T ss_pred             EEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEEEECCCCCEEEEe
Confidence            34678889888887643211        122333221  000        011346777888998888888877753100


Q ss_pred             --------------------cccCCC--CCceEEEEeC----------CCcEEEEcCCCCcceeeeeeeeccc-----CC
Q psy15191         92 --------------------HMRDDS--KQLHLLSCSM----------DKSIIVWAPDPTTGLWLETARVGEV-----GG  134 (312)
Q Consensus        92 --------------------~~~~~~--~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~-----~~  134 (312)
                                          .....|  .+..++.++.          +|.|+-+|.++++..+.........     .+
T Consensus       287 g~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g  366 (764)
T TIGR03074       287 GNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPG  366 (764)
T ss_pred             cCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEecCCCCcccCCCCC
Confidence                                000111  1235566643          6889999999988776543210000     00


Q ss_pred             -----Cccce-eEEEECCCCCeEEEeec-------------------CCeEEEecccCceeeeecccCCce---------
Q psy15191        135 -----NTLGF-YGCKFGPRGDYIIAHGF-------------------QGSLHLDVTTWKQIQTLPCHQLTI---------  180 (312)
Q Consensus       135 -----~~~~v-~~~~~~~~~~~l~~~~~-------------------~~~i~~d~~~~~~~~~~~~~~~~v---------  180 (312)
                           ....+ ..+++.++...++.+..                   +..+-+|.++++.+-.++.....+         
T Consensus       367 ~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p  446 (764)
T TIGR03074       367 ETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQP  446 (764)
T ss_pred             CEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecccCCccccccccCCc
Confidence                 00111 23455555444443211                   122333888888777666211111         


Q ss_pred             eEEEECC-CCC---EEEEEecCCeEEEEEccCCCeEEE
Q psy15191        181 TQLAFSP-DDT---HLVSVSRDRRWGLYKRQSSGRLSL  214 (312)
Q Consensus       181 ~~~~~~~-~~~---~l~~~~~d~~i~~wd~~~~~~~~~  214 (312)
                      .-+.+.. +|+   .++.++.+|.+++.|.++++.+..
T Consensus       447 ~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~  484 (764)
T TIGR03074       447 SLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP  484 (764)
T ss_pred             eEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence            1122222 553   788899999999999999887654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=83.66  E-value=31  Score=30.61  Aligned_cols=189  Identities=8%  Similarity=-0.008  Sum_probs=100.8

Q ss_pred             ceEEEecCCCcEEEeeecCCccc---cc------c---cccC-----CCCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY---LP------Y---HMRD-----DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~---~~------~---~~~~-----~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  128 (312)
                      ..++.++.++.|.-.|..+++..   ..      .   ....     .-.+..++.++.|+.|.-.|.++++..+.....
T Consensus        70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~  149 (527)
T TIGR03075        70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSKKNG  149 (527)
T ss_pred             CEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeecccc
Confidence            45666666777777787777652   00      0   0000     011236778888999999999997766544321


Q ss_pred             ecccCCCccceeEEEECC--CCCeEEEeec------CCeEEE-ecccCceeeeeccc-----------------------
Q psy15191        129 VGEVGGNTLGFYGCKFGP--RGDYIIAHGF------QGSLHL-DVTTWKQIQTLPCH-----------------------  176 (312)
Q Consensus       129 ~~~~~~~~~~v~~~~~~~--~~~~l~~~~~------~~~i~~-d~~~~~~~~~~~~~-----------------------  176 (312)
                        ... ....+   .-+|  .+..++++..      +|.+.- |.++++.+-.+..-                       
T Consensus       150 --~~~-~~~~~---tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw  223 (527)
T TIGR03075       150 --DYK-AGYTI---TAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTW  223 (527)
T ss_pred             --ccc-ccccc---cCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCC
Confidence              100 00011   1111  1223444332      455554 77666654432210                       


Q ss_pred             ---------CCceeEEEECCCCCEEEEEecC-----C-----------eEEEEEccCCCeEEEEeccCCCCcc--cceee
Q psy15191        177 ---------QLTITQLAFSPDDTHLVSVSRD-----R-----------RWGLYKRQSSGRLSLVACSDKTNGV--HKRII  229 (312)
Q Consensus       177 ---------~~~v~~~~~~~~~~~l~~~~~d-----~-----------~i~~wd~~~~~~~~~~~~~~~~~~~--~~~~v  229 (312)
                               ...-..+++.|...+++.+..+     +           +|.-.|+++++..-.++........  .....
T Consensus       224 ~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p  303 (527)
T TIGR03075       224 PGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEM  303 (527)
T ss_pred             CCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCc
Confidence                     0111245677766666655422     2           5777788887776555543322211  11112


Q ss_pred             EEEEEcCCCc---eEEEeccCCeEEEEecCCCCC
Q psy15191        230 WGVAWSHDSR---YFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       230 ~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      .-+.+..+|+   .++.+..+|.+++.|..+++.
T Consensus       304 ~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~  337 (527)
T TIGR03075       304 ILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL  337 (527)
T ss_pred             EEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence            2233334665   788999999999999988754

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=83.52  E-value=12  Score=25.86  Aligned_cols=127  Identities=9%  Similarity=-0.039  Sum_probs=0.0

Q ss_pred             cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-----CCCeEEEeecCCeEEEec
Q psy15191         90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-----RGDYIIAHGFQGSLHLDV  164 (312)
Q Consensus        90 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~~i~~d~  164 (312)
                      +....+......|+.++..|+|.|++................+..-...|++++-.+     +...|+.|+....+..|.
T Consensus         1 VaiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV   80 (136)
T PF14781_consen    1 VAIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDV   80 (136)
T ss_pred             CeEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEc


Q ss_pred             ccCceeeeecccCCceeEEEECC---CCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        165 TTWKQIQTLPCHQLTITQLAFSP---DDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       165 ~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      ....-+.... -.+.|+++.+-.   ...-++..+.+..|.-||....+.+..+.+
T Consensus        81 ~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtVtg  135 (136)
T PF14781_consen   81 ENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTVTG  135 (136)
T ss_pred             ccCchhhhhh-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEecc

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=82.52  E-value=17  Score=29.20  Aligned_cols=78  Identities=17%  Similarity=0.204  Sum_probs=50.0

Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEcc------CCCeEEEEeccCCCCcccceeeEEEEEcCCCc------------eE
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQ------SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR------------YF  241 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------~l  241 (312)
                      -..|+++|.+.+-++....+...+||..      ..+.+ .+..+...........+.+.|+....            .+
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L-~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPL-VVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccce-EEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            4689999999888888888999999987      12222 22222111111234567777775332            35


Q ss_pred             EEeccCCeEEEEecCCC
Q psy15191        242 LTISRDGVCVVWGLGEP  258 (312)
Q Consensus       242 ~s~~~dg~i~iwd~~~~  258 (312)
                      +.+++||+|.-|.-.-.
T Consensus       104 if~tEdGTisaW~p~v~  120 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALG  120 (336)
T ss_pred             EEEeCCceEEeecCcCC
Confidence            67889999999975433

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG1520|consensus

Probab=82.20  E-value=28  Score=28.96  Aligned_cols=105  Identities=13%  Similarity=0.041  Sum_probs=51.4

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE--------------
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT--------------  243 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s--------------  243 (312)
                      ++-..++|...+.-|+.+..---+..-+...+..........   ...-.-.+++..+++|....+              
T Consensus       115 GRPLGl~f~~~ggdL~VaDAYlGL~~V~p~g~~a~~l~~~~~---G~~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~a  191 (376)
T KOG1520|consen  115 GRPLGIRFDKKGGDLYVADAYLGLLKVGPEGGLAELLADEAE---GKPFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVFA  191 (376)
T ss_pred             CCcceEEeccCCCeEEEEecceeeEEECCCCCcceecccccc---CeeeeecCceeEcCCCeEEEeccccccchhheEEe
Confidence            456678898887556665433223333333222111111100   001122334445554432222              


Q ss_pred             ---eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        244 ---ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       244 ---~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                         +..+|.+.-||..+.             ....+...-.-.+.++.|||+.+++.+
T Consensus       192 ~l~g~~~GRl~~YD~~tK-------------~~~VLld~L~F~NGlaLS~d~sfvl~~  236 (376)
T KOG1520|consen  192 ALEGDPTGRLFRYDPSTK-------------VTKVLLDGLYFPNGLALSPDGSFVLVA  236 (376)
T ss_pred             eecCCCccceEEecCccc-------------chhhhhhcccccccccCCCCCCEEEEE
Confidence               234556666665543             223333333456788999999998877

>PRK13615 lipoprotein LpqB; Provisional

Probab=82.04  E-value=37  Score=30.28  Aligned_cols=145  Identities=10%  Similarity=-0.025  Sum_probs=82.1

Q ss_pred             eEEEECCCCCeEEEeecCCeEEEecccCceeeeec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .+++.++++..++....++.+.+    +.......  .....++.-.|.+++ .+.+.-.....++...........+..
T Consensus       337 ~s~avS~dg~~~A~v~~~~~l~v----g~~~~~~~~~~~~~~Lt~PS~d~~g-~vWtv~~g~~~~l~~~~~~G~~~~v~v  411 (557)
T PRK13615        337 DAATLSADGRQAAVRNASGVWSV----GDGDRDAVLLDTRPGLVAPSLDAQG-YVWSTPASDPRGLVAWGPDGVGHPVAV  411 (557)
T ss_pred             ccceEcCCCceEEEEcCCceEEE----ecCCCcceeeccCCccccCcCcCCC-CEEEEeCCCceEEEEecCCCceEEeec
Confidence            67889999999888777777776    32221100  112346666788877 666665444455554433222222222


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEecc---CCeEEEEecCCCCC-CcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGVCVVWGLGEPPT-EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      .-.    ....|..+..|+||-.++.-..   .+.|+|--+..... ...+.    -.+ ..+......+.+++|..++.
T Consensus       412 ~~~----~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~----~~p-~~l~~~l~~v~sl~W~~~~~  482 (557)
T PRK13615        412 SWT----ATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLT----TTP-LELLASPGTPLDATWVDELD  482 (557)
T ss_pred             ccc----CCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEee----ecc-EEcccCcCcceeeEEcCCCE
Confidence            111    3467999999999987765432   45677765544211 11110    001 22221233789999999988


Q ss_pred             eEEEE
Q psy15191        294 LLASA  298 (312)
Q Consensus       294 ~l~s~  298 (312)
                      +++.+
T Consensus       483 laVl~  487 (557)
T PRK13615        483 VATLT  487 (557)
T ss_pred             EEEEe
Confidence            76666

>PLN02193 nitrile-specifier protein

Probab=81.88  E-value=34  Score=29.82  Aligned_cols=24  Identities=8%  Similarity=-0.019  Sum_probs=16.3

Q ss_pred             CCCEEEEEecC----CeEEEEEccCCCe
Q psy15191        188 DDTHLVSVSRD----RRWGLYKRQSSGR  211 (312)
Q Consensus       188 ~~~~l~~~~~d----~~i~~wd~~~~~~  211 (312)
                      +++.++.++.+    ..+.+||+.+.+-
T Consensus       328 ~gkiyviGG~~g~~~~dv~~yD~~t~~W  355 (470)
T PLN02193        328 QGKVWVVYGFNGCEVDDVHYYDPVQDKW  355 (470)
T ss_pred             CCcEEEEECCCCCccCceEEEECCCCEE
Confidence            56667776655    4588999886543

>KOG3616|consensus

Probab=81.57  E-value=3.8  Score=36.93  Aligned_cols=36  Identities=14%  Similarity=0.119  Sum_probs=29.6

Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      ....++.+.-+|.++.++.++.||+|++|+......
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~q   48 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQ   48 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccch
Confidence            345577888889999999999999999999875443

>KOG1520|consensus

Probab=81.34  E-value=30  Score=28.77  Aligned_cols=101  Identities=17%  Similarity=0.159  Sum_probs=52.1

Q ss_pred             ccceeEEEECCCC-CeEEEeecCCeEEEecccCceeeeec---cc-CCceeEEEECCCCCEEEE----------------
Q psy15191        136 TLGFYGCKFGPRG-DYIIAHGFQGSLHLDVTTWKQIQTLP---CH-QLTITQLAFSPDDTHLVS----------------  194 (312)
Q Consensus       136 ~~~v~~~~~~~~~-~~l~~~~~~~~i~~d~~~~~~~~~~~---~~-~~~v~~~~~~~~~~~l~~----------------  194 (312)
                      .++...++|...+ +++++=..-|...++...........   +. -.-.+.+..+++|...+|                
T Consensus       114 CGRPLGl~f~~~ggdL~VaDAYlGL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~a~l  193 (376)
T KOG1520|consen  114 CGRPLGIRFDKKGGDLYVADAYLGLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVFAAL  193 (376)
T ss_pred             cCCcceEEeccCCCeEEEEecceeeEEECCCCCcceeccccccCeeeeecCceeEcCCCeEEEeccccccchhheEEeee
Confidence            3567789999887 54444445555555444333111110   00 011234444444433222                


Q ss_pred             -EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        195 -VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       195 -~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                       +..+|.+.-||..+......+.        .-...+.++.|||+.+++.+
T Consensus       194 ~g~~~GRl~~YD~~tK~~~VLld--------~L~F~NGlaLS~d~sfvl~~  236 (376)
T KOG1520|consen  194 EGDPTGRLFRYDPSTKVTKVLLD--------GLYFPNGLALSPDGSFVLVA  236 (376)
T ss_pred             cCCCccceEEecCcccchhhhhh--------cccccccccCCCCCCEEEEE
Confidence             2234666666666544322222        23345679999999988776

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=81.16  E-value=27  Score=28.04  Aligned_cols=145  Identities=12%  Similarity=0.096  Sum_probs=87.5

Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEEe---cccCceeeeec
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHLD---VTTWKQIQTLP  174 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~d---~~~~~~~~~~~  174 (312)
                      +++...+..+.-++|.|+.+++...+....     ...+-.++  +.-.|++..++. .+|-+.+|   ..+-.+.....
T Consensus        96 e~yvyvad~ssGL~IvDIS~P~sP~~~~~l-----nt~gyayg--v~vsGn~aYVadlddgfLivdvsdpssP~lagrya  168 (370)
T COG5276          96 EEYVYVADWSSGLRIVDISTPDSPTLIGFL-----NTDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYA  168 (370)
T ss_pred             ccEEEEEcCCCceEEEeccCCCCcceeccc-----cCCceEEE--EEecCCEEEEeeccCcEEEEECCCCCCceeeeeec
Confidence            347777778888999999986533222211     11122233  344688888777 66666664   44444544444


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .....-..++.|  |++-..+..|+-+.+-|+........+....     ....+.++..+++..+++... .| +.+-|
T Consensus       169 ~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-----~g~g~~sv~vsdnr~y~vvy~-eg-vlivd  239 (370)
T COG5276         169 LPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-----TGPGTYSVSVSDNRAYLVVYD-EG-VLIVD  239 (370)
T ss_pred             cCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-----cCCceEEEEecCCeeEEEEcc-cc-eEEEe
Confidence            444444667775  6677777899999999998766554444321     233577777777766665443 23 55666


Q ss_pred             cCCCC
Q psy15191        255 LGEPP  259 (312)
Q Consensus       255 ~~~~~  259 (312)
                      ...+.
T Consensus       240 ~s~~s  244 (370)
T COG5276         240 VSGPS  244 (370)
T ss_pred             cCCCC
Confidence            65554

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=80.56  E-value=9  Score=29.80  Aligned_cols=87  Identities=16%  Similarity=0.142  Sum_probs=47.2

Q ss_pred             EEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CC--eEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        202 GLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       202 ~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      .+||+.+.+... +...      ......+-++-|||++|.+|+. +|  .+++++......      ...|......-.
T Consensus        49 ~~yD~~tn~~rp-l~v~------td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~------~~~w~e~~~~m~  115 (243)
T PF07250_consen   49 VEYDPNTNTFRP-LTVQ------TDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDG------TCDWTESPNDMQ  115 (243)
T ss_pred             EEEecCCCcEEe-ccCC------CCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCC------CCCceECccccc
Confidence            577877654332 2221      2223344567889999999875 33  588887544111      111222111111


Q ss_pred             cCcceeEEEeccCCCeEEEEecC
Q psy15191        279 HGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      ...+--++.--|||+.|+.|+..
T Consensus       116 ~~RWYpT~~~L~DG~vlIvGG~~  138 (243)
T PF07250_consen  116 SGRWYPTATTLPDGRVLIVGGSN  138 (243)
T ss_pred             CCCccccceECCCCCEEEEeCcC
Confidence            22333345556899999999765

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=80.36  E-value=51  Score=30.85  Aligned_cols=68  Identities=18%  Similarity=0.092  Sum_probs=51.9

Q ss_pred             CccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee----c---------------ccCCceeEEEECCCCCEEEE
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL----P---------------CHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~----~---------------~~~~~v~~~~~~~~~~~l~~  194 (312)
                      ....|.++....-+..++.+..||.|.+ |..+|+.+...    .               ..-..+..++|||.+..++.
T Consensus       258 ~~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~  337 (753)
T PF11635_consen  258 LNKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQ  337 (753)
T ss_pred             cCCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEE
Confidence            3456778888788889999999999999 99999766555    1               11113345889999999999


Q ss_pred             EecCCeEE
Q psy15191        195 VSRDRRWG  202 (312)
Q Consensus       195 ~~~d~~i~  202 (312)
                      -..+|.+.
T Consensus       338 ~~~~~~~~  345 (753)
T PF11635_consen  338 IDEDGKTK  345 (753)
T ss_pred             EecCCCce
Confidence            88888866

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	312
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-15
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		8e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		8e-07
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		8e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		8e-07
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		8e-07
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-06
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		2e-06
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-05
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-05
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-05
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-05
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-05
2h9l_A	329	Wdr5delta23 Length = 329		2e-05
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-05
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-05
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		2e-05
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-05
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-05
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		2e-05
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		2e-05
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-05
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-05
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		4e-05
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		8e-04
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		7e-05

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 130/339 (38%), Gaps = 75/339 (22%)
Query: 14  GKVLYTLTNHKSKVMAVKWNGEG------------------GKVLYTLTNHKSKVMAVKW 55
           G++L TLT H S V  V ++ +G                  G++L TLT H S V  V  
Sbjct: 47  GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV-- 104
Query: 56  VLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWA 115
               +  P+ + + S S DKT  LW    +   L   +   S  +  ++ S D   I  A
Sbjct: 105 ----AFSPDGQTIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVWGVAFSPDGQTIASA 157
Query: 116 PD-PTTGLWLETARVGE-VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTL 173
            D  T  LW    ++ + + G++   +G  F P G  I +     ++ L     + +QTL
Sbjct: 158 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 217
Query: 174 PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV--------- 224
             H  ++  +AFSPD   + S S D+   L+ R      +L   S   NGV         
Sbjct: 218 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTI 277
Query: 225 ------------------------HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT 260
                                   H   +WGVA+S D +   + S D    +W       
Sbjct: 278 ASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW------- 330
Query: 261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
                 N     +Q L GH   ++ +A S DG  +ASA 
Sbjct: 331 ------NRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS 363

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 102 LLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG 158
           LLS S DK++I W     D   G+ + + +     G++     C     G Y ++  +  
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLTADGAYALSASWDK 87
Query: 159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217
           +L L DV T +  Q    H+  +  +      + ++S SRD+   ++  +     +L+  
Sbjct: 88  TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH 147
Query: 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277
           +D  + V  R++       DS   ++   D +   W L +   E D +            
Sbjct: 148 NDWVSQV--RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------------ 193
Query: 278 GHGYEIYSLAASHDGTLLASACK 300
           GH   I +L AS DGTL+ASA K
Sbjct: 194 GHNSNINTLTASPDGTLIASAGK 216

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 102 LLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG 158
           LLS S DK++I W     D   G+ + + +     G++     C     G Y ++  +  
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLTADGAYALSASWDK 87
Query: 159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217
           +L L DV T +  Q    H+  +  +      + ++S SRD+   ++  +     +L+  
Sbjct: 88  TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH 147
Query: 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277
           +D  + V  R++       DS   ++   D +   W L +   E D +            
Sbjct: 148 NDWVSQV--RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------------ 193
Query: 278 GHGYEIYSLAASHDGTLLASACK 300
           GH   I +L AS DGTL+ASA K
Sbjct: 194 GHNSNINTLTASPDGTLIASAGK 216

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 102 LLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG 158
           LLS S DK++I W     D   G+ + + +     G++     C     G Y ++  +  
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLTADGAYALSASWDK 87
Query: 159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217
           +L L DV T +  Q    H+  +  +      + ++S SRD+   ++  +     +L+  
Sbjct: 88  TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH 147
Query: 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277
           +D  + V  R++       DS   ++   D +   W L +   E D +            
Sbjct: 148 NDWVSQV--RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------------ 193
Query: 278 GHGYEIYSLAASHDGTLLASACK 300
           GH   I +L AS DGTL+ASA K
Sbjct: 194 GHNSNINTLTASPDGTLIASAGK 216

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 102 LLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG 158
           LLS S DK++I W     D   G+ + + +     G++     C     G Y ++  +  
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLTADGAYALSASWDK 87
Query: 159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217
           +L L DV T +  Q    H+  +  +      + ++S SRD+   ++  +     +L+  
Sbjct: 88  TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH 147
Query: 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277
           +D  + V  R++       DS   ++   D +   W L +   E D +            
Sbjct: 148 NDWVSQV--RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------------ 193
Query: 278 GHGYEIYSLAASHDGTLLASACK 300
           GH   I +L AS DGTL+ASA K
Sbjct: 194 GHNSNINTLTASPDGTLIASAGK 216

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 102 LLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG 158
           LLS S DK++I W     D   G+ + + +     G++     C     G Y ++  +  
Sbjct: 27  LLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLTADGAYALSASWDK 81
Query: 159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217
           +L L DV T +  Q    H+  +  +      + ++S SRD+   ++  +     +L+  
Sbjct: 82  TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH 141
Query: 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277
           +D  + V  R++       DS   ++   D +   W L +   E D +            
Sbjct: 142 NDWVSQV--RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------------ 187
Query: 278 GHGYEIYSLAASHDGTLLASACK 300
           GH   I +L AS DGTL+ASA K
Sbjct: 188 GHNSNINTLTASPDGTLIASAGK 210

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 102 LLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG 158
           LLS S DK++I W     D   G+ + + +     G++     C     G Y ++  +  
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLTADGAYALSASWDK 87
Query: 159 SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217
           +L L DV T +  Q    H+  +  +      + ++S SRD+   ++  +     +L+  
Sbjct: 88  TLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIKVWTIKGQCLATLLGH 147
Query: 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277
           +D  + V  R++       DS   ++   D     W L +   E D +            
Sbjct: 148 NDWVSQV--RVVPNEKADDDSVTIISAGNDKXVKAWNLNQFQIEADFI------------ 193
Query: 278 GHGYEIYSLAASHDGTLLASACK 300
           GH   I +L AS DGTL+ASA K
Sbjct: 194 GHNSNINTLTASPDGTLIASAGK 216

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 32/213 (15%)
Query: 46  HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH---- 101
           H+  V  V W       P    L S S D T  +WK   +       +     ++     
Sbjct: 60  HQRTVRKVAW------SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAW 113
Query: 102 ------LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG 155
                 L +CS DKS+ VW  D       E   V  +  +T       + P  + + +  
Sbjct: 114 APSGNLLATCSRDKSVWVWEVDEED----EYECVSVLNSHTQDVKHVVWHPSQELLASAS 169
Query: 156 FQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL 212
           +  ++ L   +   W    TL  H+ T+  LAF P    L S S DR   ++++   G  
Sbjct: 170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229
Query: 213 SLVACSDKT---------NGVHKRIIWGVAWSH 236
             VACS            +G H R I+ +AW  
Sbjct: 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ 262

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 72  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 114
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 115 -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 144
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 205 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 241

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 74  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 116
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 117 -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 146
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 147 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 206
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 207 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 243

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 56  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 98
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 99  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 128
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 129 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 188
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 189 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 225

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 56  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 98
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 99  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 128
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 129 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 188
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 189 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 225

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 46  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 88
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 89  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 118
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 179 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 215

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 67  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 109
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 110 -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 139
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 140 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 199
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 200 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 236

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 55  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 97
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 98  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 127
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 128 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 187
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 188 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 224

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 56  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 98
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 99  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 128
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 129 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 188
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 189 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 225

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 53  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 95
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 96  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 125
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 186 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 222

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 49  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 91
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 92  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 121
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 122 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 181
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 182 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 218

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 53  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 95
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 96  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 125
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 186 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 222

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 53  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 95
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 96  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 125
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 186 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 222

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 50  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 92
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 93  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 122
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 123 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 183 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 219

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 50  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 92
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 93  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 122
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 123 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 183 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 219

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 54/223 (24%)
Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W    GK   T++ HK  +  V W  +++L      LVS S DKT  +W           
Sbjct: 51  WGAYDGKFEKTISGHKLGISDVAWSSDSNL------LVSASDDKTLKIW----------- 93
Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
                                    D ++G  L+T +     G++   + C F P+ + I
Sbjct: 94  -------------------------DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLI 123
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++  F  S+ + DV T K ++TLP H   ++ + F+ D + +VS S D    ++   S  
Sbjct: 124 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 183
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            L  +   D         +  V +S + +Y L  + D    +W
Sbjct: 184 CLKTLIDDDNPP------VSFVKFSPNGKYILAATLDNTLKLW 220

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 73/258 (28%)
Query: 16  VLYTLTNHKSKVMAVKW--NGE-----------------GGKVLYTLTNHKSKVMAVKWV 56
           +++TL  H   V +VK+  NGE                  GK   T++ HK  +  V W 
Sbjct: 18  LMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 77
Query: 57  LNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAP 116
            +++L      LVS S DKT  +W                                    
Sbjct: 78  SDSNL------LVSASDDKTLKIW------------------------------------ 95
Query: 117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC 175
           D ++G  L+T +     G++   + C F P+ + I++  F  S+ + DV T   ++TLP 
Sbjct: 96  DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPA 150
Query: 176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS 235
           H   ++ + F+ D + +VS S D    ++   S   L  +   D         +  V +S
Sbjct: 151 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP------VSFVKFS 204
Query: 236 HDSRYFLTISRDGVCVVW 253
            + +Y L  + D    +W
Sbjct: 205 PNGKYILAATLDNTLKLW 222

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 99/265 (37%), Gaps = 72/265 (27%)
Query: 39  VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILW--------KYVSEGNYLP 90
           +++TL  H   V +VK        P  + L S S DK   +W        K +S      
Sbjct: 18  LMFTLAGHTKAVSSVK------FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 71
Query: 91  YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY 150
             +   S    L+S S DK++ +W  D ++G  L+T +     G++   + C F P+ + 
Sbjct: 72  SDVAWSSDSNLLVSASDDKTLKIW--DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 124
Query: 151 IIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS 209
           I++  F  S+ + DV T   ++TLP H                                 
Sbjct: 125 IVSGSFDESVRIWDVKTGMCLKTLPAH--------------------------------- 151
Query: 210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL 269
                   SD  + VH        ++ D    ++ S DG+C +W        + L+ +  
Sbjct: 152 --------SDPVSAVH--------FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 195
Query: 270 WPEVQKLYGHGYEIYSLAASHDGTL 294
            P V  +       Y LAA+ D TL
Sbjct: 196 -PPVSFVKFSPNGKYILAATLDNTL 219

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 67/203 (33%)
Query: 16  VLYTLTNHKSKVMAVKW--NGE-----------------GGKVLYTLTNHKSKVMAVKWV 56
           +++TL  H   V +VK+  NGE                  GK   T++ HK  +  V W 
Sbjct: 18  LMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 77
Query: 57  LNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAP 116
            +++L      LVS S DKT  +W                                    
Sbjct: 78  SDSNL------LVSASDDKTLKIW------------------------------------ 95
Query: 117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC 175
           D ++G  L+T +     G++   + C F P+ + I++  F  S+ + DV T   ++TLP 
Sbjct: 96  DVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPA 150
Query: 176 HQLTITQLAFSPDDTHLVSVSRD 198
           H   ++ + F+ D + +VS S D
Sbjct: 151 HSDPVSAVHFNRDGSLIVSSSYD 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.98
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.98
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.97
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.96
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.94
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.94
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.93
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.93
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.92
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.92
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.91
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.91
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.91
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.9
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.9
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.89
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.89
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.89
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.89
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.89
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.88
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.88
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.87
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.87
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.86
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.86
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.85
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.85
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.85
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.83
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.83
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.82
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.82
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.81
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.81
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.8
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.8
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.77
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.76
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.75
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.75
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.73
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.73
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.73
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.72
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.72
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.71
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.71
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.68
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.67
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.66
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.66
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.63
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.63
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.62
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.62
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.61
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.6
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.6
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.6
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.59
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.58
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.57
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.57
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.54
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.53
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.51
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.51
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.5
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.49
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.49
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.49
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.49
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.48
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.47
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.42
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.42
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.41
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.41
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.4
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.4
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.39
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.37
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.35
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.31
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.3
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.3
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.21
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.2
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.2
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.18
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.15
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.15
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.08
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.07
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.07
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.07
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.05
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.04
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.03
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.02
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.01
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.0
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.0
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.93
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.93
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.88
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.87
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.86
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.85
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.84
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.83
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.82
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.81
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.78
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.77
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.74
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.73
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.72
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.64
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.62
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.6
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.56
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.56
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.52
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.5
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.48
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.47
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.46
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.43
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.39
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.36
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.28
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.23
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.19
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.18
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.13
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.12
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.09
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.03
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.95
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.92
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.91
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.89
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.89
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.87
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.86
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.84
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.83
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.82
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.77
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.77
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.74
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.64
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.63
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.6
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.56
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.55
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.54
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.54
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.53
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.48
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.48
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.43
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.42
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.42
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.38
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.37
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.36
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.35
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.33
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.32
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.26
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.25
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.19
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.18
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.16
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.16
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.15
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.13
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.11
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.08
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.98
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.9
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.87
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.83
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.6
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.45
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.45
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.42
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.37
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.06
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.04
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.0
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.81
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.46
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.38
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.13
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.07
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	94.95
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	94.87
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.87
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.56
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	94.44
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.09
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	93.88
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	93.57
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	93.24
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.63
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	91.62
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	91.24
3ott_A	758	Two-component system sensor histidine kinase; beta	90.67
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	90.64
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	89.61
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	89.38
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	87.7
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	87.21
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	85.89
1sqj_A	789	OXG-RCBH, oligoxyloglucan reducing-END-specific ce	84.49
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	83.62
3ott_A	758	Two-component system sensor histidine kinase; beta	83.08
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	83.0
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	82.11
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	82.05
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	80.95

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4e-45  Score=295.28  Aligned_cols=263  Identities=20%  Similarity=0.334  Sum_probs=227.0

Q ss_pred             CCeEEEEeccCCCceEEEEEeCCC-----------------------C--ceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNGEG-----------------------G--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKD   67 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~~~-----------------------~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~   67 (312)
                      .|..+..+.+|.+.|++++|+++.                       +  .....+.+|...|.+++|+++      +.+
T Consensus        21 ~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~------~~~   94 (321)
T 3ow8_A           21 YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT------LPI   94 (321)
T ss_dssp             CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS------SSE
T ss_pred             hhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC------CCE
Confidence            456667788999999999987631                       1  123467899999999999999      899


Q ss_pred             EEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191         68 LVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        68 l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                      +++++.|++|++||+.+++..        .+....+++++.+|++++.|+.|++|++++.+..  ...     ..+...+
T Consensus        95 l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~--~~~-----~~~~~~v  167 (321)
T 3ow8_A           95 AASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--YSL-----DTRGKFI  167 (321)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE--EEE-----ECSSSCE
T ss_pred             EEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee--EEe-----cCCCceE
Confidence            999999999999999887652        3344566888999999999999999999885432  222     2566789


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      .+++|+|++++|++++.|+.|++ |+++.+....+.+|...|.+++|+|++++|++++.|+.|++||+++.+....+.. 
T Consensus       168 ~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-  246 (321)
T 3ow8_A          168 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-  246 (321)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-
T ss_pred             EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-
Confidence            99999999999999999999999 8888888888999999999999999999999999999999999998887776665 


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                            |...|.+++|+|++++|++++.|+.|++||+.++.            ++..+.+|...|.+++|+|++++|+++
T Consensus       247 ------h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~------------~~~~~~~h~~~v~~v~~s~~g~~l~s~  308 (321)
T 3ow8_A          247 ------HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT------------CVHTFFDHQDQVWGVKYNGNGSKIVSV  308 (321)
T ss_dssp             ------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             ------CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE------------EEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence                  88889999999999999999999999999998763            778889999999999999999999999


Q ss_pred             ecCCCcccceEEeC
Q psy15191        299 CKATKPEHAAIIIW  312 (312)
Q Consensus       299 s~d~~~~dg~i~iW  312 (312)
                      +.|+.     |+||
T Consensus       309 ~~d~~-----i~vw  317 (321)
T 3ow8_A          309 GDDQE-----IHIY  317 (321)
T ss_dssp             ETTCC-----EEEE
T ss_pred             eCCCe-----EEEE
Confidence            65555     9998

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.7e-44  Score=300.14  Aligned_cols=259  Identities=21%  Similarity=0.303  Sum_probs=226.2

Q ss_pred             EEEeccCCCceEEEEE-------------------eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcE
Q psy15191         17 LYTLTNHKSKVMAVKW-------------------NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTA   77 (312)
Q Consensus        17 ~~~~~~h~~~v~~~~w-------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i   77 (312)
                      ...+.+|...|++++|                   +..+++....+.+|.+.|++++|+|+      +++|++|+.|++|
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~------~~~l~sgs~D~~i  174 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS------GKLLASCSADMTI  174 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT------SSEEEEEETTSCC
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC------CCEEEEEeCCCeE
Confidence            4567789999999885                   44557778899999999999999998      8999999999999


Q ss_pred             EEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191         78 ILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        78 ~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                      ++||+.+.+..        .+..+.+.+++.++++++.|+.|++||++++.  ++..+     .+|...+.++.++|+++
T Consensus       175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--~~~~~-----~~h~~~v~~~~~~~~g~  247 (410)
T 1vyh_C          175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTF-----TGHREWVRMVRPNQDGT  247 (410)
T ss_dssp             CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEE-----ECCSSCEEEEEECTTSS
T ss_pred             EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEE-----eCCCccEEEEEECCCCC
Confidence            99999887652        34455667888899999999999999998844  33333     37888999999999999


Q ss_pred             eEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCC--------------------CCEEEEEecCCeEEEEEccC
Q psy15191        150 YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD--------------------DTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       150 ~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~i~~wd~~~  208 (312)
                      ++++++.|+.|++ |+.+.+....+.+|...|.+++|+|+                    +.+|++|+.|+.|++||+++
T Consensus       248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~  327 (410)
T 1vyh_C          248 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST  327 (410)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred             EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence            9999999999999 88887888888899999999999996                    67899999999999999998


Q ss_pred             CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe
Q psy15191        209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA  288 (312)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  288 (312)
                      ...+..+.+       |...|++++|+|++++|++|+.||.|++||+..+.            ++..+.+|...|++++|
T Consensus       328 ~~~~~~~~~-------h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~------------~~~~~~~h~~~v~~l~~  388 (410)
T 1vyh_C          328 GMCLMTLVG-------HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR------------CMKTLNAHEHFVTSLDF  388 (410)
T ss_dssp             TEEEEEEEC-------CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC------------CCEEEECCSSCEEEEEE
T ss_pred             CceEEEEEC-------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------------eEEEEcCCCCcEEEEEE
Confidence            888777765       88889999999999999999999999999997653            57788899999999999


Q ss_pred             ccCCCeEEEEecCCCcccceEEeC
Q psy15191        289 SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       289 s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|++.+|++||.|+     .|+||
T Consensus       389 ~~~~~~l~sgs~D~-----~i~vW  407 (410)
T 1vyh_C          389 HKTAPYVVTGSVDQ-----TVKVW  407 (410)
T ss_dssp             CSSSSCEEEEETTS-----EEEEE
T ss_pred             cCCCCEEEEEeCCC-----cEEEE
Confidence            99999999995554     59999

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.4e-43  Score=288.77  Aligned_cols=264  Identities=19%  Similarity=0.263  Sum_probs=222.0

Q ss_pred             CCeEEEEeccCCCceEEEEEeCC-------------------CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNGE-------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL   73 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~~-------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~   73 (312)
                      ..+...++.+|.+.|++++|+++                   +++.+..+..|...|.+++|+|+      +++|++|+.
T Consensus        44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~s~~~  117 (340)
T 1got_B           44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS------GNYVACGGL  117 (340)
T ss_dssp             CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT------SSEEEEEET
T ss_pred             cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC------CCEEEEEeC
Confidence            35677889999999999986654                   35667778889999999999999      999999999


Q ss_pred             CCcEEEeeecCCcc------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         74 DKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        74 dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      |+.|++|++.+...            ..+....+.+++ .+++++.|+.|++||+.+.+  ....     +.+|...|.+
T Consensus       118 d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~--~~~~-----~~~h~~~v~~  189 (340)
T 1got_B          118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQ--QTTT-----FTGHTGDVMS  189 (340)
T ss_dssp             TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSCEEE
T ss_pred             CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCc--EEEE-----EcCCCCceEE
Confidence            99999999976532            012222233333 58999999999999998843  2222     3478899999


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      ++|+|+++++++|+.|+.|++ |+++......+.+|...|.+++|+|++++|++++.|+.|++||+++.+.+..+.... 
T Consensus       190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-  268 (340)
T 1got_B          190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-  268 (340)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-
T ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC-
Confidence            999999999999999999999 888888888888999999999999999999999999999999999877665554211 


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                          +...|++++|+|++++|++|+.||.|++||+....            .+..+.+|...|.+++|+|+|.+|++||.
T Consensus       269 ----~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~------------~~~~~~~h~~~v~~~~~s~dg~~l~s~s~  332 (340)
T 1got_B          269 ----IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD------------RAGVLAGHDNRVSCLGVTDDGMAVATGSW  332 (340)
T ss_dssp             ----CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred             ----cccceEEEEECCCCCEEEEECCCCeEEEEEcccCc------------EeeEeecCCCcEEEEEEcCCCCEEEEEcC
Confidence                34579999999999999999999999999987763            67788999999999999999999999966


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                      |+.     |+||
T Consensus       333 D~~-----i~iW  339 (340)
T 1got_B          333 DSF-----LKIW  339 (340)
T ss_dssp             TSC-----EEEE
T ss_pred             Ccc-----EEec
Confidence            555     9999

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1e-43  Score=293.90  Aligned_cols=280  Identities=20%  Similarity=0.285  Sum_probs=226.7

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCC-------------------CCceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGE-------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~-------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      .|++.+..+..++.+|.+.|++++|+++                   +++....+.+|...|.+++|+|+      +++|
T Consensus        50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~------g~~l  123 (380)
T 3iz6_a           50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPN------GQSV  123 (380)
T ss_dssp             CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTT------SSEE
T ss_pred             ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCC------CCEE
Confidence            4677788899999999999999996554                   46677888999999999999999      9999


Q ss_pred             EEecCCCcEEEeeecCCcc---------------cccccccCCCC-CceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc
Q psy15191         69 VSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSK-QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV  132 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  132 (312)
                      ++|+.|+.|++||+.....               ..+..+.+.++ +..|++++.|++|++||+.+++..  ........
T Consensus       124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~  201 (380)
T 3iz6_a          124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI--SIFGSEFP  201 (380)
T ss_dssp             EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE--EEECCCSS
T ss_pred             EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE--EEeecccC
Confidence            9999999999999865321               11222333343 457999999999999999985433  22222233


Q ss_pred             CCCccceeEEEECC-CCCeEEEeecCCeEEE-ecc-cCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        133 GGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVT-TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       133 ~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      .+|...|.+++|++ +++++++|+.|+.|++ |++ .......+.+|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus       202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~  281 (380)
T 3iz6_a          202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG  281 (380)
T ss_dssp             SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred             CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence            57888999999987 8899999999999999 665 33555667789999999999999999999999999999999998


Q ss_pred             CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe----eccCcceeE
Q psy15191        210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL----YGHGYEIYS  285 (312)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~  285 (312)
                      ..+..+.........+...|++++|+|+|++|++|+.||.|++||+..+.            .+..+    .+|.+.|++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~------------~~~~~~~~~~~h~~~v~~  349 (380)
T 3iz6_a          282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE------------MVLNLGTLQNSHEGRISC  349 (380)
T ss_dssp             EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC------------EEEEECCSCSSCCCCCCE
T ss_pred             cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc------------eEEEEecccCCCCCceEE
Confidence            88777665433322244568999999999999999999999999987763            33444    579999999


Q ss_pred             EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        286 LAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++|+|+|++|++||.|+.     |+||
T Consensus       350 l~~s~dg~~l~sgs~D~~-----i~iW  371 (380)
T 3iz6_a          350 LGLSSDGSALCTGSWDKN-----LKIW  371 (380)
T ss_dssp             EEECSSSSEEEEECTTSC-----EEEE
T ss_pred             EEECCCCCEEEEeeCCCC-----EEEE
Confidence            999999999999955555     9999

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.8e-42  Score=282.51  Aligned_cols=264  Identities=19%  Similarity=0.282  Sum_probs=222.6

Q ss_pred             CeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD   74 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d   74 (312)
                      .+...++.+|...|++++|++++                   ++....+..|...|.+++|+|+      +.+|++|+.|
T Consensus        54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~------g~~lasg~~d  127 (354)
T 2pbi_B           54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS------GCAIACGGLD  127 (354)
T ss_dssp             CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT------SSEEEEESTT
T ss_pred             cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC------CCEEEEeeCC
Confidence            46778899999999999976654                   4556677778889999999999      9999999999


Q ss_pred             CcEEEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191         75 KTAILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY  140 (312)
Q Consensus        75 g~i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~  140 (312)
                      +.+++|++.....              ..+..+.+.+++..+++++.|++|++||+++.+  .+..+     .+|...|.
T Consensus       128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~-----~~h~~~v~  200 (354)
T 2pbi_B          128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSF-----HGHGADVL  200 (354)
T ss_dssp             SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEE-----ECCSSCEE
T ss_pred             CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEE-----cCCCCCeE
Confidence            9999999865421              123445567788899999999999999998844  33333     37888999


Q ss_pred             EEEECC--CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        141 GCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       141 ~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      +++|+|  ++++|++|+.||.|++ |+++.+....+..|...|.+++|+|++++|++++.|+.|++||++.......+..
T Consensus       201 ~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~  280 (354)
T 2pbi_B          201 CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK  280 (354)
T ss_dssp             EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence            999987  5789999999999999 8888888888889999999999999999999999999999999998766655443


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  297 (312)
                      ..     +...+.+++|+|++++|++|+.|+.|++||+..+.            .+..+.+|...|++++|+|+|++|++
T Consensus       281 ~~-----~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~------------~~~~l~~h~~~v~~l~~spdg~~l~s  343 (354)
T 2pbi_B          281 ES-----IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS------------RVSILFGHENRVSTLRVSPDGTAFCS  343 (354)
T ss_dssp             TT-----CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS------------EEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred             CC-----cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc------------eEEEEECCCCcEEEEEECCCCCEEEE
Confidence            21     34468899999999999999999999999997763            67788899999999999999999999


Q ss_pred             EecCCCcccceEEeC
Q psy15191        298 ACKATKPEHAAIIIW  312 (312)
Q Consensus       298 ~s~d~~~~dg~i~iW  312 (312)
                      |+.|+     .|+||
T Consensus       344 gs~D~-----~v~vW  353 (354)
T 2pbi_B          344 GSWDH-----TLRVW  353 (354)
T ss_dssp             EETTS-----EEEEE
T ss_pred             EcCCC-----CEEec
Confidence            95555     49999

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.9e-42  Score=277.82  Aligned_cols=239  Identities=16%  Similarity=0.175  Sum_probs=203.1

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      +..++|.+|.+.|++++|+|+      +++|++++.||+|++||+.++...        .+....+.+++.+|++++.|+
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~------~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~   77 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPT------EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF   77 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred             eeEEeecCCCCceEEEEECCC------CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence            457789999999999999999      999999999999999999887652        233445567788999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC-ceeeeecccCCceeEEEECC
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW-KQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~  187 (312)
                      .|++||+.+++  .+..+     .+|...|.+++|+|++++|++|+.|+.|++ |+++. .+...+.+|...|.+++|+|
T Consensus        78 ~i~vwd~~~~~--~~~~~-----~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p  150 (304)
T 2ynn_A           78 RIRVFNYNTGE--KVVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP  150 (304)
T ss_dssp             EEEEEETTTCC--EEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred             EEEEEECCCCc--EEEEE-----eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence            99999998854  22333     378899999999999999999999999999 66554 44556778999999999999


Q ss_pred             -CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC--CCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        188 -DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH--DSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       188 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                       ++.+|++|+.|+.|++||++.......+...      +...+..++|+|  ++++|++|+.|+.|++||++++.     
T Consensus       151 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-----  219 (304)
T 2ynn_A          151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-----  219 (304)
T ss_dssp             TCTTEEEEEETTSEEEEEETTCSSCSEEEECC------CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-----
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCccceeccC------CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-----
Confidence             6789999999999999999877665555432      556788899986  77899999999999999998763     


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                             ++..+.+|...|.+++|+|++++|++|+.|+.     |++|
T Consensus       220 -------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-----i~iW  255 (304)
T 2ynn_A          220 -------CVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-----LKIW  255 (304)
T ss_dssp             -------EEEEEECCSSCEEEEEECSSSSEEEEEETTSC-----EEEE
T ss_pred             -------cceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-----EEEE
Confidence                   78889999999999999999999999965555     9998

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.7e-42  Score=275.75  Aligned_cols=243  Identities=21%  Similarity=0.314  Sum_probs=205.0

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEe
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCS  106 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~  106 (312)
                      +.+...+++|.+.|++++|+|+  -.+++.+|+||+.|++|+||++..+..          ..+....+++++..+++++
T Consensus        22 g~~~~~~~~H~~~V~~v~~~~~--~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s   99 (321)
T 3ow8_A           22 GILFKQEQAHDDAIWSVAWGTN--KKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS   99 (321)
T ss_dssp             EEEEEETTSSSSCEEEEEEC---------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred             hheeeecccCCCcEEEEEEecC--CCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe
Confidence            5566778899999999999985  012367899999999999999876543          2344455677788999999


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAF  185 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~  185 (312)
                      .|+.|++||+.+++  .+...     ..+...+.+++|+|++++|++++.++.+++ ++++.+....+..|...|.+++|
T Consensus       100 ~D~~i~lWd~~~~~--~~~~~-----~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~  172 (321)
T 3ow8_A          100 LDAHIRLWDLENGK--QIKSI-----DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY  172 (321)
T ss_dssp             TTSEEEEEETTTTE--EEEEE-----ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred             CCCcEEEEECCCCC--EEEEE-----eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence            99999999998843  33333     256677889999999999999999999999 88888877788888899999999


Q ss_pred             CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      +|++++|++++.|+.|++||+++.+.+..+..       |..+|.+++|+|++++|++++.|+.|++||+....      
T Consensus       173 spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~------  239 (321)
T 3ow8_A          173 SPDGKYLASGAIDGIINIFDIATGKLLHTLEG-------HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN------  239 (321)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC------
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc------
Confidence            99999999999999999999998887777665       78889999999999999999999999999998763      


Q ss_pred             cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            ....+.+|...|.+++|+|++++|++++.|+.     |++|
T Consensus       240 ------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-----v~iw  275 (321)
T 3ow8_A          240 ------LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-----VKVW  275 (321)
T ss_dssp             ------EEEEECCCSSCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred             ------eeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-----EEEE
Confidence                  67788999999999999999999999966555     9998

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=5.1e-41  Score=271.28  Aligned_cols=259  Identities=21%  Similarity=0.234  Sum_probs=214.6

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCC-------------------------ceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGG-------------------------KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~-------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      ..+..++.+|.+.|.+++|++..+                         .++..+.+|...|.+++|+|+      +++|
T Consensus         7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d------g~~l   80 (319)
T 3frx_A            7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD------GAYA   80 (319)
T ss_dssp             EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT------SSEE
T ss_pred             EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC------CCEE
Confidence            456678999999999999877542                         235578899999999999999      9999


Q ss_pred             EEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191         69 VSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY  140 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~  140 (312)
                      ++|+.|++|++||+.+++..        .+..+.+++++.++++++.|++|++||++..   .+.     .+.+|...+.
T Consensus        81 ~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---~~~-----~~~~h~~~v~  152 (319)
T 3frx_A           81 LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---CLA-----TLLGHNDWVS  152 (319)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC---EEE-----EECCCSSCEE
T ss_pred             EEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEE-----EEeccCCcEE
Confidence            99999999999999887652        3444556788889999999999999999742   222     2347888999


Q ss_pred             EEEECCC------CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        141 GCKFGPR------GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       141 ~~~~~~~------~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      +++++|.      +..+++++.|+.|++ |+++.+....+.+|...|.+++|+|++++|++++.||.|++||+++.+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~  232 (319)
T 3frx_A          153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY  232 (319)
T ss_dssp             EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred             EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence            9999985      448999999999999 888888888888999999999999999999999999999999999888777


Q ss_pred             EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe--------eccCcceeE
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--------YGHGYEIYS  285 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~  285 (312)
                      .+.        +...|.+++|+|++.+|++++.+ .+++|++....            .+..+        ..|...+.+
T Consensus       233 ~~~--------~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~------------~~~~~~~~~~~~~~~~~~~v~~  291 (319)
T 3frx_A          233 TLS--------AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQY------------LVDDLRPEFAGYSKAAEPHAVS  291 (319)
T ss_dssp             EEE--------CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEE------------EEEEECCCCTTCCGGGCCCEEE
T ss_pred             Eec--------CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCe------------eeeccCccccccccCcCcceeE
Confidence            766        34569999999999999988765 49999987642            12222        245677999


Q ss_pred             EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        286 LAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++|+|+|++|++|+.|+.     |+||
T Consensus       292 ~~~spdg~~l~sg~~Dg~-----i~vW  313 (319)
T 3frx_A          292 LAWSADGQTLFAGYTDNV-----IRVW  313 (319)
T ss_dssp             EEECTTSSEEEEEETTSC-----EEEE
T ss_pred             EEECCCCCEEEEeecCce-----EEEE
Confidence            999999999999965555     9999

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.8e-41  Score=274.82  Aligned_cols=228  Identities=17%  Similarity=0.180  Sum_probs=189.5

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------------LPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      |...|.+++|+|+      + .|++|+.||+|+|||+.+++..            .+..+.+++++.+|++++.|++|++
T Consensus        81 ~~~~v~~~~~s~d------~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~i  153 (344)
T 4gqb_B           81 TEAGVADLTWVGE------R-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKV  153 (344)
T ss_dssp             ESSCEEEEEEETT------T-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             cCCCEEEEEEeCC------C-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence            4567999999998      4 6889999999999999887652            3455667889999999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECC-C
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSP-D  188 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~-~  188 (312)
                      ||+++++  .+..     +.+|...|.+++|+|++. +|++++.|+.|++ |+++.+....+.  .+...+.+++|+| +
T Consensus       154 wd~~~~~--~~~~-----~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~  226 (344)
T 4gqb_B          154 WDLAQQV--VLSS-----YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ  226 (344)
T ss_dssp             EETTTTE--EEEE-----ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred             EECCCCc--EEEE-----EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCC
Confidence            9999843  3333     348999999999999885 6789999999999 777777766654  4566799999999 5


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      +++|++|+.||.|++||+++.+.+..+..       |...|++++|+|++ ++|++|+.|+.|+|||+..+         
T Consensus       227 ~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-------h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---------  290 (344)
T 4gqb_B          227 SEVFVFGDENGTVSLVDTKSTSCVLSSAV-------HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---------  290 (344)
T ss_dssp             TTEEEEEETTSEEEEEESCC--CCEEEEC-------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---------
T ss_pred             CcceEEeccCCcEEEEECCCCcEEEEEcC-------CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---------
Confidence            66889999999999999999888887776       88899999999998 58999999999999999876         


Q ss_pred             cccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                          .+..+.+|.+.|++++|+|+++ +|+++|.|++     |++|
T Consensus       291 ----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~-----v~~w  327 (344)
T 4gqb_B          291 ----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ-----VVHH  327 (344)
T ss_dssp             ----EEEEECCCSSCEEEEEECSSSTTEEEEEETTSC-----EEEE
T ss_pred             ----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe-----EEEE
Confidence                4567889999999999999986 5678855555     9998

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=7.4e-41  Score=268.56  Aligned_cols=255  Identities=15%  Similarity=0.185  Sum_probs=211.6

Q ss_pred             EEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191         16 VLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT   76 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~   76 (312)
                      ...++.+|.+.|.+++                   |+..+++.+..+..|..+|.+++|+|+      +++|++|+.|++
T Consensus         5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~s~d~~   78 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR------KNWIIVGSDDFR   78 (304)
T ss_dssp             CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG------GTEEEEEETTSE
T ss_pred             eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCC------CCEEEEECCCCE
Confidence            4456677777777777                   555557788889999999999999999      899999999999


Q ss_pred             EEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-C
Q psy15191         77 AILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-R  147 (312)
Q Consensus        77 i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  147 (312)
                      |++||+.+++..        .+..+.+++++.++++++.|++|++||+++....      ...+.+|...|.+++|+| +
T Consensus        79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~------~~~~~~h~~~v~~v~~~p~~  152 (304)
T 2ynn_A           79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL------EQTFEGHEHFVMCVAFNPKD  152 (304)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE------EEEECCCCSCEEEEEECTTC
T ss_pred             EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch------hhhhcccCCcEEEEEECCCC
Confidence            999999987762        3445566788889999999999999999864211      112347889999999999 6


Q ss_pred             CCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        148 GDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      +..|++|+.|+.|++ |+++......+. .|...+..+.|+|  ++.+|++++.|+.|++||+++.+.+..+..      
T Consensus       153 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~------  226 (304)
T 2ynn_A          153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG------  226 (304)
T ss_dssp             TTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC------
T ss_pred             CCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC------
Confidence            789999999999999 555544443333 5667899999987  778999999999999999999888887776      


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC--eEEEEecC
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT--LLASACKA  301 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~s~d  301 (312)
                       |...|.+++|+|++++|++|+.||.|++||+.+..            .+..+..|...+.+++|+|++.  ++++|+.|
T Consensus       227 -h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~  293 (304)
T 2ynn_A          227 -HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK------------VEKTLNVGLERSWCIATHPTGRKNYIASGFDN  293 (304)
T ss_dssp             -CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC------------EEEEECCSSSSEEEEEECTTCGGGCEEEEETT
T ss_pred             -CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------------eeeeccCCCccEEEEEECCCCCceEEEEecCC
Confidence             88889999999999999999999999999998763            6778888999999999999885  58888433

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-40  Score=271.23  Aligned_cols=281  Identities=22%  Similarity=0.313  Sum_probs=212.1

Q ss_pred             CCeEEEEeccCCC-ceEEEEEeCCCC-------------------ceE--E-EEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191         13 GGKVLYTLTNHKS-KVMAVKWNGEGG-------------------KVL--Y-TLTNHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus        13 ~~~~~~~~~~h~~-~v~~~~w~~~~~-------------------~~~--~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      ..+++.++.+|.. .|.+++|++++.                   +..  . ...+|...|.+++|+|+      +++|+
T Consensus         4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~------g~~l~   77 (345)
T 3fm0_A            4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC------GNYLA   77 (345)
T ss_dssp             CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT------SSEEE
T ss_pred             cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC------CCEEE
Confidence            3467788888887 888888877652                   211  1 22589999999999999      99999


Q ss_pred             EecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191         70 SCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                      +|+.|++|++|++..+..          ..+..+.+++++.+|++++.|+.|++||+++......    ...+.+|...|
T Consensus        78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~----~~~~~~h~~~v  153 (345)
T 3fm0_A           78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC----VSVLNSHTQDV  153 (345)
T ss_dssp             EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE----EEEECCCCSCE
T ss_pred             EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE----EEEecCcCCCe
Confidence            999999999999877642          2345566788899999999999999999987432211    12234788899


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-ecccCc--eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE-
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV-  215 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-  215 (312)
                      .+++|+|++++|++++.|+.|++ |.++.+  ....+.+|...|.+++|+|++++|++++.|+.|++||.........+ 
T Consensus       154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~  233 (345)
T 3fm0_A          154 KHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVA  233 (345)
T ss_dssp             EEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCC
T ss_pred             EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccce
Confidence            99999999999999999999999 554433  33567789999999999999999999999999999997543211000 


Q ss_pred             --------eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc-eeEEeeccCcceeEE
Q psy15191        216 --------ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP-EVQKLYGHGYEIYSL  286 (312)
Q Consensus       216 --------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~  286 (312)
                              .........|...|.+++|+|++.+|++++.|+.|++|+..........    ... ......+|...|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~----~~~~~~~~~~~h~~~V~~v  309 (345)
T 3fm0_A          234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP----TFSLTAHLHQAHSQDVNCV  309 (345)
T ss_dssp             CC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC----CEEEEEEETTSSSSCEEEE
T ss_pred             eeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee----eEEEEeeecccccCcEeEe
Confidence                    0000001117778999999999999999999999999998765322110    001 122345899999999


Q ss_pred             EeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        287 AASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       287 ~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|+|++ .+||+||.|+.     |++|
T Consensus       310 ~~~p~~~~~laS~s~Dg~-----v~~W  331 (345)
T 3fm0_A          310 AWNPKEPGLLASCSDDGE-----VAFW  331 (345)
T ss_dssp             EECSSSTTEEEEEETTSC-----EEEE
T ss_pred             EEeCCCceEEEEcCCCCc-----EEEE
Confidence            999998 59999965555     9999

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=4.2e-41  Score=275.75  Aligned_cols=254  Identities=19%  Similarity=0.228  Sum_probs=199.4

Q ss_pred             eccCCCceEEEEEeCCCCceEE-----------------------------EEccccCcEEEEEEecCcCcCCCCceEEE
Q psy15191         20 LTNHKSKVMAVKWNGEGGKVLY-----------------------------TLTNHKSKVMAVKWVLNTSLDPEHKDLVS   70 (312)
Q Consensus        20 ~~~h~~~v~~~~w~~~~~~~~~-----------------------------~~~~h~~~v~~~~~~~~~~~~~~~~~l~s   70 (312)
                      ..+|...|.+++|+|++..++.                             ...+|...|++++|+|+      +. +++
T Consensus        38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d------~~-~l~  110 (357)
T 4g56_B           38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE------KG-ILV  110 (357)
T ss_dssp             --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT------TE-EEE
T ss_pred             cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC------CC-EEE
Confidence            4568999999999987632221                             12357888999999998      64 566


Q ss_pred             ecCCCcEEEeeecCCccc------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         71 CSLDKTAILWKYVSEGNY------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        71 ~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      ++.||+|+|||+.+++..            .+..+.+++++.+|++++.|+.|++||+++++  .+..     +..|...
T Consensus       111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~-----~~~h~~~  183 (357)
T 4g56_B          111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKS-----YNAHSSE  183 (357)
T ss_dssp             EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSC
T ss_pred             EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEE-----EcCCCCC
Confidence            788999999999876542            34455678899999999999999999998843  3333     2478899


Q ss_pred             eeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        139 FYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       139 v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      |.+++|+|++. .+++++.|+.|++ |+++.+....+.  .+...+.+++|+|+ +.+|++|+.|+.|++||+++.+...
T Consensus       184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~  263 (357)
T 4g56_B          184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ  263 (357)
T ss_dssp             EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE
T ss_pred             EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE
Confidence            99999999875 7889999999999 666655544433  56778999999997 5688899999999999999888877


Q ss_pred             EEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-C
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-D  291 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~  291 (312)
                      .+..       |...|++++|+|++ ++||+|+.|+.|+|||+..+             .+....+|...|++++|+| +
T Consensus       264 ~~~~-------~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-------------~~~~~~~H~~~V~~vafsP~d  323 (357)
T 4g56_B          264 TSAV-------HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-------------EVFRDLSHRDFVTGVAWSPLD  323 (357)
T ss_dssp             EECC-------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-------------EEEEECCCSSCEEEEEECSSS
T ss_pred             EEec-------cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-------------cEeEECCCCCCEEEEEEeCCC
Confidence            7765       78889999999987 58999999999999999876             3444568999999999998 7


Q ss_pred             CCeEEEEecCCCcccceEEeC
Q psy15191        292 GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       292 ~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.+|+++|.|++     |++|
T Consensus       324 ~~~l~s~s~Dg~-----v~iW  339 (357)
T 4g56_B          324 HSKFTTVGWDHK-----VLHH  339 (357)
T ss_dssp             TTEEEEEETTSC-----EEEE
T ss_pred             CCEEEEEcCCCe-----EEEE
Confidence            999999966555     9998

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=7.4e-40  Score=263.84  Aligned_cols=268  Identities=23%  Similarity=0.358  Sum_probs=220.0

Q ss_pred             CCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL   73 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~   73 (312)
                      ......++.+|...|.+++|++++                   ++....+.+|...|.+++|+|+      +++|++|+.
T Consensus        12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~   85 (312)
T 4ery_A           12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD------SNLLVSASD   85 (312)
T ss_dssp             CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT------SSEEEEEET
T ss_pred             CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC------CCEEEEECC
Confidence            467788899999999999966543                   5667788899999999999999      899999999


Q ss_pred             CCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         74 DKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        74 dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      |+.|++||+.+++..        .+....+++++.++++++.|+.|++||+++.+.  ...     +..|..++.+++|+
T Consensus        86 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~-----~~~~~~~v~~~~~~  158 (312)
T 4ery_A           86 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKT-----LPAHSDPVSAVHFN  158 (312)
T ss_dssp             TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE--EEE-----ECCCSSCEEEEEEC
T ss_pred             CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE--EEE-----ecCCCCcEEEEEEc
Confidence            999999999887652        234455678888999999999999999987442  222     24678899999999


Q ss_pred             CCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        146 PRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      |+++++++++.|+.|++ |+++.+....+. .+...+..++|+|++++|++++.|+.|++||+++.+.+..+......  
T Consensus       159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--  236 (312)
T 4ery_A          159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE--  236 (312)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS--
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc--
Confidence            99999999999999999 777776665553 56678999999999999999999999999999988777766653211  


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                        ...+......+++.+|++|+.||.|++||+..+.            .+..+.+|...|.+++|+|++++|++++.   
T Consensus       237 --~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~---  299 (312)
T 4ery_A          237 --KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE------------IVQKLQGHTDVVISTACHPTENIIASAAL---  299 (312)
T ss_dssp             --SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC------------EEEEECCCSSCEEEEEECSSSSEEEEEEC---
T ss_pred             --eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch------------hhhhhhccCCcEEEEeecCcCCceEEEEc---
Confidence              1112233344688999999999999999998763            67888999999999999999999999963   


Q ss_pred             cccceEEeC
Q psy15191        304 PEHAAIIIW  312 (312)
Q Consensus       304 ~~dg~i~iW  312 (312)
                      +.|+.|++|
T Consensus       300 ~~d~~i~~W  308 (312)
T 4ery_A          300 ENDKTIKLW  308 (312)
T ss_dssp             TTTCCEEEE
T ss_pred             cCCccEEEe
Confidence            245669999

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5.6e-41  Score=280.08  Aligned_cols=236  Identities=20%  Similarity=0.322  Sum_probs=208.1

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcE
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      ...+.+|..+|++++|+|+      +.+|++|+.||+|++||+.+++..        .+..+.+++++.+|++|+.|++|
T Consensus       101 ~~~l~gh~~~V~~~~~~p~------~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i  174 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPV------FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTI  174 (410)
T ss_dssp             SCEEECCSSCEEEEEECSS------SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred             eEeecccCCcEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence            4578899999999999999      899999999999999999887652        34445567888899999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      ++||+.+.+  .+.     .+.+|...|.+++|+|+++++++++.|+.|++ |+++......+.+|...|.++.++|++.
T Consensus       175 ~iwd~~~~~--~~~-----~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~  247 (410)
T 1vyh_C          175 KLWDFQGFE--CIR-----TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT  247 (410)
T ss_dssp             CEEETTSSC--EEE-----CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred             EEEeCCCCc--eeE-----EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC
Confidence            999998743  222     33478899999999999999999999999999 8888888888889999999999999999


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC--------------------CceEEEeccCCeE
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD--------------------SRYFLTISRDGVC  250 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~s~~~dg~i  250 (312)
                      +|++++.|+.|++||+++......+..       |...|.+++|+|+                    +.+|++|+.|+.|
T Consensus       248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i  320 (410)
T 1vyh_C          248 LIASCSNDQTVRVWVVATKECKAELRE-------HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI  320 (410)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred             EEEEEcCCCeEEEEECCCCceeeEecC-------CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence            999999999999999998887776655       8888999999996                    6789999999999


Q ss_pred             EEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++||+..+.            ++..+.+|...|++++|+|+|++|++|+.|     |.|++|
T Consensus       321 ~iwd~~~~~------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~i~vw  365 (410)
T 1vyh_C          321 KMWDVSTGM------------CLMTLVGHDNWVRGVLFHSGGKFILSCADD-----KTLRVW  365 (410)
T ss_dssp             EEEETTTTE------------EEEEEECCSSCEEEEEECSSSSCEEEEETT-----TEEEEE
T ss_pred             EEEECCCCc------------eEEEEECCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEE
Confidence            999998763            678889999999999999999999999554     559998

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.9e-40  Score=290.37  Aligned_cols=282  Identities=17%  Similarity=0.216  Sum_probs=223.4

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG   86 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~   86 (312)
                      .+-..++|+.+..-.+.    ....|+..+++....+.+|...|++++|+|+      |++||+|+.|++|+|||+.+++
T Consensus        23 ~~~~spdg~~l~~~~~~----~v~l~~~~~~~~~~~~~~h~~~v~~~~~spd------g~~lasg~~d~~v~lWd~~~~~   92 (611)
T 1nr0_A           23 VLGNTPAGDKIQYCNGT----SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS------GYYCASGDVHGNVRIWDTTQTT   92 (611)
T ss_dssp             CCEECTTSSEEEEEETT----EEEEEETTCSSCCEEECCCSSCEEEEEECTT------SSEEEEEETTSEEEEEESSSTT
T ss_pred             EEeeCCCCCEEEeCCCC----EEEEecCCCcccCeEecCCCCceEEEEECCC------CcEEEEEeCCCCEEEeECCCCc
Confidence            34445667777665432    2244999999999999999999999999999      9999999999999999986543


Q ss_pred             c----------cccccccCCCCCceEEEEeCC----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC-eE
Q psy15191         87 N----------YLPYHMRDDSKQLHLLSCSMD----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YI  151 (312)
Q Consensus        87 ~----------~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l  151 (312)
                      .          ..+..+.+++++..|++++.+    +.|++||...  .       ...+.+|...|.+++|+|++. .|
T Consensus        93 ~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~-------~~~l~gh~~~v~~v~f~p~~~~~l  163 (611)
T 1nr0_A           93 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S-------NGNLTGQARAMNSVDFKPSRPFRI  163 (611)
T ss_dssp             CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B-------CBCCCCCSSCEEEEEECSSSSCEE
T ss_pred             ceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C-------cceecCCCCCceEEEECCCCCeEE
Confidence            2          134456678889899988865    4788888543  1       123458999999999999987 59


Q ss_pred             EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeE
Q psy15191        152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW  230 (312)
Q Consensus       152 ~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~  230 (312)
                      ++++.|+.+++ |..+.+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.........|...|.
T Consensus       164 ~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~  243 (611)
T 1nr0_A          164 ISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF  243 (611)
T ss_dssp             EEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred             EEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence            99999999999 77777777888899999999999999999999999999999999988877665322111223889999


Q ss_pred             EEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc-------------------------------ccccceeEEeecc
Q psy15191        231 GVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ-------------------------------NTLWPEVQKLYGH  279 (312)
Q Consensus       231 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~  279 (312)
                      +++|+|++++|++++.|+.|++||+.++.....+..                               ....+....+.+|
T Consensus       244 ~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh  323 (611)
T 1nr0_A          244 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH  323 (611)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred             EEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC
Confidence            999999999999999999999999987532211100                               0001134566789


Q ss_pred             CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        280 GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       280 ~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...|++++|+|+|++|++++.|+.     |++|
T Consensus       324 ~~~v~~l~~spdg~~l~s~s~D~~-----v~~W  351 (611)
T 1nr0_A          324 NKAITALSSSADGKTLFSADAEGH-----INSW  351 (611)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred             CCCEEEEEEeCCCCEEEEEeCCCc-----EEEE
Confidence            999999999999999999966555     9998

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.2e-40  Score=291.50  Aligned_cols=278  Identities=21%  Similarity=0.294  Sum_probs=215.9

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEc-------cccCcEEEEEEecCcC
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLT-------NHKSKVMAVKWVLNTS   60 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~-------~h~~~v~~~~~~~~~~   60 (312)
                      ++|+..+++++.++.+|...|.+++|++++                   ++.+..+.       +|.+.|++++|+|+  
T Consensus       173 ~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd--  250 (611)
T 1nr0_A          173 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD--  250 (611)
T ss_dssp             EEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT--
T ss_pred             EEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC--
Confidence            578989999999999999999999976654                   45556663       79999999999999  


Q ss_pred             cCCCCceEEEecCCCcEEEeeecCCccc---------------------------------------------------c
Q psy15191         61 LDPEHKDLVSCSLDKTAILWKYVSEGNY---------------------------------------------------L   89 (312)
Q Consensus        61 ~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------------------------------------------------~   89 (312)
                          +++|++++.|++|++||+.+++..                                                   .
T Consensus       251 ----g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~  326 (611)
T 1nr0_A          251 ----GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA  326 (611)
T ss_dssp             ----SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred             ----CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence                999999999999999998865431                                                   1


Q ss_pred             cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeee---------e-----------------ee--------------
Q psy15191         90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLET---------A-----------------RV--------------  129 (312)
Q Consensus        90 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~-----------------~~--------------  129 (312)
                      +..+.+++++.+|++++.|++|++||+.+++......         .                 +.              
T Consensus       327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~  406 (611)
T 1nr0_A          327 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV  406 (611)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred             EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence            2234457888999999999999999988643211100         0                 00              


Q ss_pred             ------------------------------------cccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce--e
Q psy15191        130 ------------------------------------GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ--I  170 (312)
Q Consensus       130 ------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~--~  170 (312)
                                                          ..+ .+...+.+++|+|++++|++|+.|+.|++ |+.+...  .
T Consensus       407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~  485 (611)
T 1nr0_A          407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV  485 (611)
T ss_dssp             EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE
T ss_pred             eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeee
Confidence                                                000 12345788999999999999999999999 4443322  1


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                      .. .+|...|++++|+||+++|++++.|+.|++||+.+.......    .....|...|++++|+|++++||+|+.|+.|
T Consensus       486 ~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~----~~~~~H~~~V~~v~fspdg~~lasgs~D~~v  560 (611)
T 1nr0_A          486 KT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT----NSWTFHTAKVACVSWSPDNVRLATGSLDNSV  560 (611)
T ss_dssp             EE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC----CCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeee----eeeeecccceeEEEECCCCCEEEEEECCCcE
Confidence            22 479999999999999999999999999999999863322110    0011288899999999999999999999999


Q ss_pred             EEEecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++||+..+...          .+..+.+| ...|++++|+|+++ |++++.|++     |++|
T Consensus       561 ~lW~~~~~~~~----------~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~-----i~lW  607 (611)
T 1nr0_A          561 IVWNMNKPSDH----------PIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSN-----IKFW  607 (611)
T ss_dssp             EEEETTCTTSC----------CEEETTSSTTSCEEEEEEEETTE-EEEEETTSC-----EEEE
T ss_pred             EEEECCCcccc----------cchhhccCcccCeeEEEEcCCCE-EEEecCCCC-----EEEE
Confidence            99999875321          22556789 89999999999998 999955555     9999

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=8.2e-40  Score=284.93  Aligned_cols=264  Identities=29%  Similarity=0.434  Sum_probs=221.6

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC------------------CceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      ++|+. +++.+..+.+|...|.+++|+++.                  ++.+..+.+|...|.+++|+|+      +++|
T Consensus       287 ~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~------g~~l  359 (577)
T 2ymu_A          287 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPD------GQTI  359 (577)
T ss_dssp             EEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT------SSEE
T ss_pred             EEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCC------CCEE
Confidence            46774 477888899999999999877654                  3445677889999999999999      9999


Q ss_pred             EEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         69 VSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      ++++.|+.|++||......       ..+..+.+++++.+|++++.|+.|++||...   ..+..     +.+|...|.+
T Consensus       360 ~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~-----~~~~~~~v~~  431 (577)
T 2ymu_A          360 ASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQT-----LTGHSSSVWG  431 (577)
T ss_dssp             EEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC---CEEEE-----EECCSSCEEE
T ss_pred             EEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC---CEEEE-----ecCCCCCeEE
Confidence            9999999999999643321       2344455678889999999999999999653   22222     2378889999


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      ++|+|++++|++++.|+.+++ |. +.+....+.+|...|.+++|+|++++|++++.|+.|++||. +.+.+..+..   
T Consensus       432 ~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~---  506 (577)
T 2ymu_A          432 VAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG---  506 (577)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC---
T ss_pred             EEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC---
Confidence            999999999999999999999 53 44566677789999999999999999999999999999996 4666666665   


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                          |...|++++|+|++++||+++.||.|++||....             ++..+.+|.+.|++++|+|||++|+|++.
T Consensus       507 ----h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~-------------~~~~~~~h~~~v~~~~fs~dg~~l~s~~~  569 (577)
T 2ymu_A          507 ----HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-------------LLQTLTGHSSSVWGVAFSPDGQTIASASS  569 (577)
T ss_dssp             ----CSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC-------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred             ----CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC-------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence                8889999999999999999999999999996432             78889999999999999999999999955


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                      |+.     |++|
T Consensus       570 D~~-----i~~W  576 (577)
T 2ymu_A          570 DKT-----VKLW  576 (577)
T ss_dssp             TSC-----EEEE
T ss_pred             CCE-----EEEe
Confidence            554     9999

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.8e-40  Score=269.81  Aligned_cols=254  Identities=19%  Similarity=0.322  Sum_probs=204.7

Q ss_pred             CCceEEEEccccC-cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------cccccccCCCCCceEE
Q psy15191         36 GGKVLYTLTNHKS-KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        36 ~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~~~~~l~  103 (312)
                      ..+++.++.+|.. .|++++|+|+      +++||+|+.|++|+|||+..+..           ..+..+.+++++.+|+
T Consensus         4 ~~~~~~~~~~h~~~~v~~l~~sp~------g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~   77 (345)
T 3fm0_A            4 SLVLLGRVPAHPDSRCWFLAWNPA------GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA   77 (345)
T ss_dssp             CEEEEEEECCSTTSCEEEEEECTT------SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEE
T ss_pred             cEEEeeeecCCCCCcEEEEEECCC------CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEE
Confidence            3457889999988 9999999999      99999999999999999987642           1345566788899999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc---eeeeecccCCc
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK---QIQTLPCHQLT  179 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~---~~~~~~~~~~~  179 (312)
                      +++.|+.+++|++..........     +.+|...|.+++|+|++++|++++.|+.|++ |+.+.+   ....+.+|...
T Consensus        78 s~s~D~~v~iw~~~~~~~~~~~~-----~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~  152 (345)
T 3fm0_A           78 SASFDATTCIWKKNQDDFECVTT-----LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD  152 (345)
T ss_dssp             EEETTSCEEEEEECCC-EEEEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred             EEECCCcEEEEEccCCCeEEEEE-----ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence            99999999999988754333333     3489999999999999999999999999999 554432   34456689999


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeE--EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL--SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      |.+++|+|++++|++++.|+.|++||.+.....  ..+..       |...|++++|+|++++|++++.|+.|++||...
T Consensus       153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~-------h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~  225 (345)
T 3fm0_A          153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG-------HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL  225 (345)
T ss_dssp             EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecC-------CCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence            999999999999999999999999999876533  23333       888999999999999999999999999999755


Q ss_pred             CCCCcccc---cccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        258 PPTEEDLV---QNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       258 ~~~~~~~~---~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.......   ....|+++..+.+ |...|++++|+|++..|++++.|+.     |++|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-----i~vw  279 (345)
T 3fm0_A          226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-----IRVF  279 (345)
T ss_dssp             TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-----EEEE
T ss_pred             CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-----EEEE
Confidence            43222111   1223445666666 8899999999999999999966555     9988

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.1e-39  Score=266.09  Aligned_cols=271  Identities=17%  Similarity=0.209  Sum_probs=206.1

Q ss_pred             eEEEEeccCCCceEEEEE-----eC-CC--------------------------CceEEEEccccCcEEEEEEecCcCcC
Q psy15191         15 KVLYTLTNHKSKVMAVKW-----NG-EG--------------------------GKVLYTLTNHKSKVMAVKWVLNTSLD   62 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w-----~~-~~--------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~   62 (312)
                      ++..++.+|.+.|++++|     ++ ++                          +.+...+.+|...|++++|+|+    
T Consensus        12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~----   87 (343)
T 2xzm_R           12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE----   87 (343)
T ss_dssp             EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS----
T ss_pred             eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC----
Confidence            456678888888888877     43 21                          1245567899999999999999    


Q ss_pred             CCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC
Q psy15191         63 PEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG  134 (312)
Q Consensus        63 ~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  134 (312)
                        +.+|++|+.|++|++||+.+++..        .+..+.+++++.+|++++.|+.|++||+....     .........
T Consensus        88 --~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-----~~~~~~~~~  160 (343)
T 2xzm_R           88 --NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-----KFSSAEKEN  160 (343)
T ss_dssp             --TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-----EEECCTTTS
T ss_pred             --CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-----eeeeecccC
Confidence              899999999999999999887652        34456678889999999999999999997421     111222346


Q ss_pred             CccceeEEEECCCC----------CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEE
Q psy15191        135 NTLGFYGCKFGPRG----------DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGL  203 (312)
Q Consensus       135 ~~~~v~~~~~~~~~----------~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  203 (312)
                      |...+.+++|+|++          .++++++.|+.|++ | .+.+....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus       161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i  239 (343)
T 2xzm_R          161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLI  239 (343)
T ss_dssp             CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred             CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEE
Confidence            78889999999987          78999999999999 5 334455566789999999999999999999999999999


Q ss_pred             EEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc--ccccccccceeEEeeccC
Q psy15191        204 YKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE--DLVQNTLWPEVQKLYGHG  280 (312)
Q Consensus       204 wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~  280 (312)
                      ||+.... ....+.        +...|.+++|+|++++++++ .|+.|++||+.+.....  .+..... .......+|.
T Consensus       240 wd~~~~~~~~~~~~--------~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  309 (343)
T 2xzm_R          240 WDILNLTYPQREFD--------AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPI-TKAEGQKGKN  309 (343)
T ss_dssp             EESSCCSSCSEEEE--------CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSG-GGBTTBCCSC
T ss_pred             EECCCCcccceeec--------CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcc-hhhhhhcCCC
Confidence            9995433 333332        44569999999999887755 57789999998764321  0000000 0011123688


Q ss_pred             cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       281 ~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..|++++|+|+|++|++|+     .||.|++|
T Consensus       310 ~~v~~~~~sp~g~~l~sg~-----~Dg~v~~w  336 (343)
T 2xzm_R          310 PQCTSLAWNALGKKLFAGF-----TDGVIRTF  336 (343)
T ss_dssp             CCEEEEEECSSSCCEEEEE-----TTSEEEEE
T ss_pred             CceEEEEECCCCCeEEEec-----CCceEEEE
Confidence            8999999999999999995     45559998

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.5e-40  Score=265.35  Aligned_cols=275  Identities=19%  Similarity=0.297  Sum_probs=203.1

Q ss_pred             CCeEEEEeccCCCceEEEEEeC-----------------CCC--ceEEEE-cc-ccCcEEEEEEecCcCcCCCCceEEEe
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNG-----------------EGG--KVLYTL-TN-HKSKVMAVKWVLNTSLDPEHKDLVSC   71 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~-----------------~~~--~~~~~~-~~-h~~~v~~~~~~~~~~~~~~~~~l~s~   71 (312)
                      +.+++.++.+|++.|.++.|++                 ..+  +.+..+ .+ |...|++++|+|+      +++|++|
T Consensus         3 ~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~------~~~las~   76 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH------TSLLAAG   76 (330)
T ss_dssp             CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT------SSEEEEE
T ss_pred             ccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC------CCEEEEE
Confidence            4567888999999999888554                 332  344555 44 9999999999999      8999999


Q ss_pred             cCCCcEEEeeecCCc-------c--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         72 SLDKTAILWKYVSEG-------N--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        72 ~~dg~i~vw~~~~~~-------~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      +.|++|++||+....       .        ..+..+.+++++.+|++++.|++|++||++......   .....+.+|.
T Consensus        77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~---~~~~~~~~h~  153 (330)
T 2hes_X           77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY---ECISVLQEHS  153 (330)
T ss_dssp             ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC---EEEEEECCCS
T ss_pred             eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe---EEEEEeccCC
Confidence            999999999985321       1        234556678889999999999999999995422110   1112234788


Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccC--ceeeeecccCCceeEEEECCC--CCEEEEEecCCeEEEEEccCCCe
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW--KQIQTLPCHQLTITQLAFSPD--DTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      ..|.+++|+|++++|++++.|+.|++ |..+.  +....+.+|...|.+++|+|+  +.+|++++.|++|++||++....
T Consensus       154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~  233 (330)
T 2hes_X          154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE  233 (330)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred             CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence            99999999999999999999999999 44332  455667799999999999998  67899999999999999875421


Q ss_pred             --EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE-EeeccCc-ceeEEE
Q psy15191        212 --LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYGHGY-EIYSLA  287 (312)
Q Consensus       212 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~v~~~~  287 (312)
                        .............|...|.+++|++++ +|++++.||.|++||...+.          |+... .+.+|.. .|.+++
T Consensus       234 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~----------~~~~~~~~~~h~~~~v~~v~  302 (330)
T 2hes_X          234 DDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE----------WKVFAKRALCHGVYEINVVK  302 (330)
T ss_dssp             TSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE----------EEEEEEESCTTTTSCEEEEE
T ss_pred             cccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc----------eEEEeccccccccceEEEEE
Confidence              000000000011177889999999765 89999999999999986541          11222 3357877 899999


Q ss_pred             ecc--CCCeEEEEecCCCcccceEEeC
Q psy15191        288 ASH--DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       288 ~s~--~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+|  ++++|++|+.|     |.|+||
T Consensus       303 ~~~~~~~~~las~s~D-----g~v~~W  324 (330)
T 2hes_X          303 WLELNGKTILATGGDD-----GIVNFW  324 (330)
T ss_dssp             EC-----CCEEEEETT-----SEEEEE
T ss_pred             EecCCCceEEEEecCC-----CcEEEE
Confidence            999  78999999554     559998

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.4e-39  Score=265.19  Aligned_cols=242  Identities=20%  Similarity=0.247  Sum_probs=204.9

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      .+...++.+|.+.|++++|+|+      +++|++|+.||+|++||+.++...        .+..+.+++++.++++++.|
T Consensus        45 ~~~~~~l~gH~~~v~~~~~s~d------~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  118 (340)
T 1got_B           45 MRTRRTLRGHLAKIYAMHWGTD------SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD  118 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTT------SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred             chhheeecCCCCceEEEEECCC------CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence            4667899999999999999999      999999999999999999877652        23445567888999999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      +.|++|++.+.+....   ....+.+|...+.++.|++++. +++++.|+.|++ |+++.+....+.+|...|.+++|+|
T Consensus       119 ~~v~iw~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~  194 (340)
T 1got_B          119 NICSIYNLKTREGNVR---VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP  194 (340)
T ss_dssp             CEEEEEETTTCSBSCE---EEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred             CeEEEEECccCCCcce---eEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence            9999999987543211   1122347889999999998875 889999999999 8888888888889999999999999


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      ++++|++++.|+.|++||+++......+..       |...|++++|+|++++|++|+.||.|++||++...        
T Consensus       195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~--------  259 (340)
T 1got_B          195 DTRLFVSGACDASAKLWDVREGMCRQTFTG-------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--------  259 (340)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCSEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------
T ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEEcC-------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------
Confidence            999999999999999999998888777665       88889999999999999999999999999998762        


Q ss_pred             cccceeEEee--ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLY--GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          .+..+.  .+...|++++|+|+|++|++|+.|     |.|++|
T Consensus       260 ----~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----~~i~vw  297 (340)
T 1got_B          260 ----ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----FNCNVW  297 (340)
T ss_dssp             ----EEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred             ----EEEEEccCCcccceEEEEECCCCCEEEEECCC-----CeEEEE
Confidence                333333  234579999999999999999554     559998

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=8.3e-39  Score=265.66  Aligned_cols=260  Identities=22%  Similarity=0.305  Sum_probs=201.9

Q ss_pred             cCCCceEEEEEeCCC------------------CceEEEEccccC------------------cEEEEEEecCcCcCCCC
Q psy15191         22 NHKSKVMAVKWNGEG------------------GKVLYTLTNHKS------------------KVMAVKWVLNTSLDPEH   65 (312)
Q Consensus        22 ~h~~~v~~~~w~~~~------------------~~~~~~~~~h~~------------------~v~~~~~~~~~~~~~~~   65 (312)
                      +|...|.+++|++++                  ++.+..+.+|..                  .|++++|+|+      +
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d------g  135 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD------G  135 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT------S
T ss_pred             CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC------C
Confidence            588888888877654                  444555555432                  3899999999      9


Q ss_pred             ceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      ++|++|+.|+.|++||+.+++..        .+..+.+.+++.+|++++.|++|++||+++.+.  .....      +..
T Consensus       136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~------~~~  207 (393)
T 1erj_A          136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLS------IED  207 (393)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEE------CSS
T ss_pred             CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEEE------cCC
Confidence            99999999999999999887652        344556678888999999999999999988542  22222      345


Q ss_pred             ceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeee-------cccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        138 GFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTL-------PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       138 ~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      .+.+++|+| +++++++++.|+.|++ |.++......+       .+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus       208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~  287 (393)
T 1erj_A          208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN  287 (393)
T ss_dssp             CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence            689999999 8999999999999999 77766666555       47899999999999999999999999999999986


Q ss_pred             CCeEEEEeccC-----CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcce
Q psy15191        209 SGRLSLVACSD-----KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEI  283 (312)
Q Consensus       209 ~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  283 (312)
                      ...........     .....|...|.+++|+|++++|++|+.|+.|++||+.++.            ++..+.+|...|
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~------------~~~~l~~h~~~v  355 (393)
T 1erj_A          288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN------------PLLMLQGHRNSV  355 (393)
T ss_dssp             -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC------------EEEEEECCSSCE
T ss_pred             CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe------------EEEEECCCCCCE
Confidence            43221110000     0011177889999999999999999999999999998763            678889999999


Q ss_pred             eEEEecc------CCCeEEEEecCCCcccceEEeC
Q psy15191        284 YSLAASH------DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       284 ~~~~~s~------~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+++|++      ++++|++|+.     ||.|+||
T Consensus       356 ~~v~~~~~~~~~p~~~~l~sgs~-----Dg~i~iW  385 (393)
T 1erj_A          356 ISVAVANGSSLGPEYNVFATGSG-----DCKARIW  385 (393)
T ss_dssp             EEEEECSSCTTCTTCEEEEEEET-----TSEEEEE
T ss_pred             EEEEecCCcCcCCCCCEEEEECC-----CCcEEEC
Confidence            9999886      6889999955     5559999

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=4.4e-39  Score=262.21  Aligned_cols=273  Identities=19%  Similarity=0.171  Sum_probs=215.0

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCCc-------------------------eEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGGK-------------------------VLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~-------------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      .+..++..+|+||++.|++++|+|+.++                         +...+.+|...|.+++|+|+      +
T Consensus        25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d------g   98 (340)
T 4aow_A           25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD------G   98 (340)
T ss_dssp             -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT------S
T ss_pred             CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC------C
Confidence            3445567789999999999998886432                         34567889999999999999      9


Q ss_pred             ceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      ++|++++.|+.|++|+.......        ........+.+..+++++.|+.+++||+.....      ......+|..
T Consensus        99 ~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~------~~~~~~~~~~  172 (340)
T 4aow_A           99 QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK------YTVQDESHSE  172 (340)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE------EEECSSSCSS
T ss_pred             CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce------EEEEeccccC
Confidence            99999999999999998876652        222333456777999999999999999876322      1222346788


Q ss_pred             ceeEEEECCCC--CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE
Q psy15191        138 GFYGCKFGPRG--DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL  214 (312)
Q Consensus       138 ~v~~~~~~~~~--~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  214 (312)
                      .+..++|++++  .++++++.|+.|++ |.++.+....+.+|...|++++|+|++++|++++.|+.|++||+++.+.+..
T Consensus       173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~  252 (340)
T 4aow_A          173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT  252 (340)
T ss_dssp             CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred             cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence            89999998865  56788999999999 8888888888999999999999999999999999999999999998888777


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                      +.        +...|.+++|+|++. +++++.|+.|++||++.......+..   ........+|...|++++|+|+|++
T Consensus       253 ~~--------~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~h~~~v~~l~~s~dg~~  320 (340)
T 4aow_A          253 LD--------GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQ---EVISTSSKAEPPQCTSLAWSADGQT  320 (340)
T ss_dssp             EE--------CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECC---C-------CCCCCEEEEEECTTSSE
T ss_pred             ec--------CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccc---cceeeeccCCCCCEEEEEECCCCCE
Confidence            66        456799999999876 45566799999999986532111100   0122334578999999999999999


Q ss_pred             EEEEecCCCcccceEEeC
Q psy15191        295 LASACKATKPEHAAIIIW  312 (312)
Q Consensus       295 l~s~s~d~~~~dg~i~iW  312 (312)
                      |++|+.|+.     |+||
T Consensus       321 l~sgs~Dg~-----v~iW  333 (340)
T 4aow_A          321 LFAGYTDNL-----VRVW  333 (340)
T ss_dssp             EEEEETTSC-----EEEE
T ss_pred             EEEEeCCCE-----EEEE
Confidence            999965555     9999

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2.4e-39  Score=258.94  Aligned_cols=241  Identities=17%  Similarity=0.297  Sum_probs=189.5

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCC--CCceEEEEeC
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDS--KQLHLLSCSM  107 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~--~~~~l~~~~~  107 (312)
                      +..+.+|.+.|++++|+|+      |++||+|+.|++|+|||+....  .        ..+..+.+.+  ++.+|++++.
T Consensus         2 ~~~~~~h~~~V~~~~~s~~------g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~   75 (297)
T 2pm7_B            2 VVIANAHNEMIHDAVMDYY------GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY   75 (297)
T ss_dssp             CEECCSCSSCEEEEEECTT------SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred             ceeccCCcCceEEEEECCC------CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC
Confidence            3567899999999999999      9999999999999999997532  1        1233334433  3679999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCce--eeeecccCCceeE
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWKQ--IQTLPCHQLTITQ  182 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~~--~~~~~~~~~~v~~  182 (312)
                      |++|++||+++++......     +..|...|.+++|+|+  +.+|++++.|+.|++ |+++...  ...+.+|...|.+
T Consensus        76 D~~v~iWd~~~~~~~~~~~-----~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~  150 (297)
T 2pm7_B           76 DGKVMIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS  150 (297)
T ss_dssp             TTEEEEEEBSSSCBCCCEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred             CCEEEEEEcCCCceEEEEE-----eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccce
Confidence            9999999998743222222     2468889999999997  889999999999999 5554321  2345589999999


Q ss_pred             EEECCC-------------CCEEEEEecCCeEEEEEccCCCe----EEEEeccCCCCcccceeeEEEEEcCCC---ceEE
Q psy15191        183 LAFSPD-------------DTHLVSVSRDRRWGLYKRQSSGR----LSLVACSDKTNGVHKRIIWGVAWSHDS---RYFL  242 (312)
Q Consensus       183 ~~~~~~-------------~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~  242 (312)
                      ++|+|+             +++|++|+.|+.|++||+++...    ...+..       |...|.+++|+|++   ++|+
T Consensus       151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~-------H~~~V~~v~~sp~~~~~~~la  223 (297)
T 2pm7_B          151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-------HSDWVRDVAWSPTVLLRSYMA  223 (297)
T ss_dssp             EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-------CSSCEEEEEECCCCSSSEEEE
T ss_pred             EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC-------CCCceEEEEECCCCCCceEEE
Confidence            999997             57999999999999999987652    223333       88899999999985   8999


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEe--eccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--YGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++.|+.|++||+.......         ....+  ..|...|.+++|+|+|++||+++.|+.     |+||
T Consensus       224 s~s~D~~v~iWd~~~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~-----v~lw  281 (297)
T 2pm7_B          224 SVSQDRTCIIWTQDNEQGPW---------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-----VTLW  281 (297)
T ss_dssp             EEETTSCEEEEEESSTTSCC---------EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC-----EEEE
T ss_pred             EEECCCcEEEEEeCCCCCcc---------ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc-----EEEE
Confidence            99999999999997642110         11222  467889999999999999999965555     9998

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=8.6e-39  Score=278.49  Aligned_cols=264  Identities=30%  Similarity=0.442  Sum_probs=222.8

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC------------------CceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      ++|+. +++.+..+.+|...|.+++|++++                  ++.+..+.+|...|++++|+|+      +++|
T Consensus       246 ~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l  318 (577)
T 2ymu_A          246 KLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD------GQTI  318 (577)
T ss_dssp             EEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT------SSEE
T ss_pred             EEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCC------CCEE
Confidence            46774 578889999999999999977654                  4556778899999999999999      8999


Q ss_pred             EEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         69 VSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      ++++.|+.|++||......       ..+....+++++.++++++.|+.|++||...   ..+...     ..|...|.+
T Consensus       319 ~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~---~~~~~~-----~~~~~~v~~  390 (577)
T 2ymu_A          319 ASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTL-----TGHSSSVRG  390 (577)
T ss_dssp             EEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC---CEEEEE-----ECCSSCEEE
T ss_pred             EEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC---CEEEEe-----cCCCCCeEE
Confidence            9999999999999876543       2334455678889999999999999999653   222222     368889999


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      ++|+|++++|++++.|+.|++ | .+.+....+.+|...|.+++|+|++++|++++.|+.|++||.. .+.+..+..   
T Consensus       391 ~~~s~dg~~l~~~~~d~~v~~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~---  465 (577)
T 2ymu_A          391 VAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTG---  465 (577)
T ss_dssp             EEECTTSSCEEEEETTSEEEEEC-TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEEC---
T ss_pred             EEECCCCCEEEEEeCCCEEEEEe-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcC---
Confidence            999999999999999999999 4 3456666777899999999999999999999999999999975 555555554   


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                          |...|++++|+|++++|++++.|+.|++||....             ++..+.+|...|++++|+|+|++|++++.
T Consensus       466 ----~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~-------------~~~~~~~h~~~v~~l~~s~dg~~l~s~~~  528 (577)
T 2ymu_A          466 ----HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-------------LLQTLTGHSSSVRGVAFSPDGQTIASASD  528 (577)
T ss_dssp             ----CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC-------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred             ----CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC-------------EEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence                7888999999999999999999999999996432             67889999999999999999999999954


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                           ||.|+||
T Consensus       529 -----dg~v~lw  535 (577)
T 2ymu_A          529 -----DKTVKLW  535 (577)
T ss_dssp             -----TSEEEEE
T ss_pred             -----cCEEEEE
Confidence                 5559998

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.5e-40  Score=272.70  Aligned_cols=251  Identities=20%  Similarity=0.223  Sum_probs=205.2

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |++....+.+++.+|.+.|++++|+|+      +++|+||+.||+|+|||+.+++..        .+..+.+++++.+++
T Consensus        51 ~~~~~~~~~~~l~gH~~~V~~~~~sp~------~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la  124 (380)
T 3iz6_a           51 FNPTDLVCCRTLQGHSGKVYSLDWTPE------KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA  124 (380)
T ss_dssp             CCCCCCEEEEEECCCSSCEEEEEECTT------SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred             cccceeEEeecccccccEEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence            888888999999999999999999999      899999999999999999887652        344556788999999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeee-----ccc
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTL-----PCH  176 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~-----~~~  176 (312)
                      +++.|+.+++|++.+.............+.+|...+.++.|.|+ +..|++|+.|+.|++ |+++.+....+     .+|
T Consensus       125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h  204 (380)
T 3iz6_a          125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH  204 (380)
T ss_dssp             ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred             EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence            99999999999997632211111112234588899999999996 456999999999999 77766666555     478


Q ss_pred             CCceeEEEECC-CCCEEEEEecCCeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        177 QLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       177 ~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      ...|.+++|+| ++++|++|+.|+.|++||++. ......+.+       |...|++++|+|++++|++|+.||.|++||
T Consensus       205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd  277 (380)
T 3iz6_a          205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG-------HEGDINSVKFFPDGQRFGTGSDDGTCRLFD  277 (380)
T ss_dssp             CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC-------CSSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred             ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC-------cCCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence            99999999987 889999999999999999984 355555554       888999999999999999999999999999


Q ss_pred             cCCCCCCcccccccccceeEEeecc-------CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGH-------GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..+.            .+..+..+       ...|++++|+|+|++|++|+.|+.     |++|
T Consensus       278 ~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-----i~vw  325 (380)
T 3iz6_a          278 MRTGH------------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-----CYVW  325 (380)
T ss_dssp             TTTTE------------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-----EEEE
T ss_pred             CCCCc------------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-----EEEE
Confidence            98863            33333332       235899999999999999955554     9998

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=4.8e-39  Score=263.31  Aligned_cols=245  Identities=20%  Similarity=0.259  Sum_probs=205.4

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      .+...++.+|.+.|++++|+|+      +++|+||+.||+|++||..++...        .+..+.++|++..+++++.|
T Consensus        54 ~~~~~~l~gH~~~V~~~~~s~d------~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d  127 (354)
T 2pbi_B           54 MKTRRTLKGHGNKVLCMDWCKD------KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD  127 (354)
T ss_dssp             CCEEEEEECCSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred             cEEEEEecCCCCeEEEEEECCC------CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence            4567899999999999999999      899999999999999998776652        34456678899999999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      +.+++|++......... .....+..|...|.+++|+|++..|++++.|+.|++ |+++.+....+.+|...|.+++|+|
T Consensus       128 ~~i~v~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~  206 (354)
T 2pbi_B          128 NKCSVYPLTFDKNENMA-AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP  206 (354)
T ss_dssp             SEEEEEECCCCTTCCSG-GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred             CCEEEEEEecccccccc-ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence            99999998753221110 111223468889999999999999999999999999 8888888888999999999999988


Q ss_pred             --CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        188 --DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       188 --~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                        ++++|++++.||.|++||+++.+....+..       |...|++++|+|++++|++++.|+.|++||++...      
T Consensus       207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~------  273 (354)
T 2pbi_B          207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-------HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR------  273 (354)
T ss_dssp             CSSCCEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc------
Confidence              578999999999999999999888777665       88899999999999999999999999999998752      


Q ss_pred             cccccceeEEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            .+..+..  +...+.+++|+|+|++|++|+.|+.     |++|
T Consensus       274 ------~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-----i~vw  311 (354)
T 2pbi_B          274 ------EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-----INVW  311 (354)
T ss_dssp             ------EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred             ------EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-----EEEE
Confidence                  3333332  3357899999999999999965555     9998

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-39  Score=260.84  Aligned_cols=252  Identities=17%  Similarity=0.260  Sum_probs=192.0

Q ss_pred             CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEE
Q psy15191         36 GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        36 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~  103 (312)
                      +.+++.++.+|.++|++++|+|+        +|++|+.|++|++||+..+..            ..+..+.++|++.+|+
T Consensus         3 ~~~~~~~~~~h~~~v~~~~~s~~--------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la   74 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSFDFSQG--------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA   74 (330)
T ss_dssp             CCEEEEEEECCSSCEEEEEEETT--------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE
T ss_pred             ccccceeeccCCCceeeeccCCC--------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE
Confidence            45678899999999999999876        899999999999999976421            1234456678889999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc----cCceeeeecccCC
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT----TWKQIQTLPCHQL  178 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~----~~~~~~~~~~~~~  178 (312)
                      +++.|++|++||+...............+.+|...|.+++|+|++++|++++.|+.|++ |++    .++....+.+|..
T Consensus        75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~  154 (330)
T 2hes_X           75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ  154 (330)
T ss_dssp             EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred             EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence            99999999999986422110011122234589999999999999999999999999999 552    2234556778999


Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccCC--CeEEEEeccCCCCcccceeeEEEEEcCC--CceEEEeccCCeEEEEe
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSS--GRLSLVACSDKTNGVHKRIIWGVAWSHD--SRYFLTISRDGVCVVWG  254 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd  254 (312)
                      .|.+++|+|++.+|++++.|+.|++||..+.  +.+..+..       |...|.+++|+|+  +.+|++++.|+.|++||
T Consensus       155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~  227 (330)
T 2hes_X          155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG-------HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK  227 (330)
T ss_dssp             CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-------CSSCEEEEEECCSSSSCEEEEEETTSCEEEEE
T ss_pred             ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC-------CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEE
Confidence            9999999999999999999999999998765  33444443       8889999999998  67899999999999999


Q ss_pred             cCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..+....    ...|.+...+.+ |...|++++|++++ +|++++.|+.     |+||
T Consensus       228 ~~~~~~~~----~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-----v~iw  276 (330)
T 2hes_X          228 YMGDDEDD----QQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-----LAVY  276 (330)
T ss_dssp             EEEECTTS----CEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-----EEEE
T ss_pred             ecCCCccc----cceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-----EEEE
Confidence            87643211    112334555555 89999999999765 8999955555     9998

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.1e-39  Score=263.09  Aligned_cols=244  Identities=18%  Similarity=0.267  Sum_probs=184.3

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCC--CCceEEEEeCC
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDS--KQLHLLSCSMD  108 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~--~~~~l~~~~~d  108 (312)
                      ..+.+|.+.|++++|+|+      +++||+|+.|++|+|||+.++..          ..+..+.+.+  ++.+|++++.|
T Consensus         7 ~~~~~H~~~V~~v~~s~~------g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D   80 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYY------GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD   80 (316)
T ss_dssp             -------CCEEEEEECGG------GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred             eecccccCeEEEeeEcCC------CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence            345789999999999999      99999999999999999987642          1233334433  36799999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccC---ceeeeecccCCceeE
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTW---KQIQTLPCHQLTITQ  182 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~---~~~~~~~~~~~~v~~  182 (312)
                      ++|++||+++++.....     .+.+|...|.+++|+|+  +.+|++++.|+.|++ |.++.   +....+.+|...+.+
T Consensus        81 ~~v~iWd~~~~~~~~~~-----~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~  155 (316)
T 3bg1_A           81 RKVIIWREENGTWEKSH-----EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA  155 (316)
T ss_dssp             SCEEEECCSSSCCCEEE-----EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred             CEEEEEECCCCcceEEE-----EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence            99999999874322222     23478899999999997  789999999999999 54432   223445588999999


Q ss_pred             EEECCC-----------------CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC----ceE
Q psy15191        183 LAFSPD-----------------DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS----RYF  241 (312)
Q Consensus       183 ~~~~~~-----------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l  241 (312)
                      ++|+|+                 +++|++++.|+.|++||++...........    ..|...|.+++|+|++    ++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l----~~h~~~V~~v~~sp~~~~~~~~l  231 (316)
T 3bg1_A          156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL----EAHSDWVRDVAWAPSIGLPTSTI  231 (316)
T ss_dssp             CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC----BCCSSCEEEEECCCCSSCSCCEE
T ss_pred             EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec----ccCCCceEEEEecCCCCCCCceE
Confidence            999997                 478999999999999999755322222111    1288899999999986    789


Q ss_pred             EEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        242 LTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       242 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++++.|+.|++|++........        ....+..|...|.+++|+|++++||+++.|+.     |+||
T Consensus       232 as~s~D~~v~iw~~~~~~~~~~--------~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~-----v~lw  289 (316)
T 3bg1_A          232 ASCSQDGRVFIWTCDDASSNTW--------SPKLLHKFNDVVWHVSWSITANILAVSGGDNK-----VTLW  289 (316)
T ss_dssp             EEEETTCEEEEEECSSTTCCCC--------BCCEEEECSSCEEEEEECTTTCCEEEEESSSC-----EEEE
T ss_pred             EEEcCCCeEEEEEccCccccch--------hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe-----EEEE
Confidence            9999999999999876321110        12344678899999999999999999965555     9998

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-37  Score=256.23  Aligned_cols=268  Identities=19%  Similarity=0.176  Sum_probs=223.9

Q ss_pred             CeEEEEeccCCCceEEEEEeC-------------------CCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNG-------------------EGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD   74 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~-------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d   74 (312)
                      ......+.+|...|++++|++                   .+++.+..+.+|...|.+++|+|+      +++|++++.|
T Consensus        22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~d   95 (369)
T 3zwl_B           22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF------TKYCVTGSAD   95 (369)
T ss_dssp             SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT------SSEEEEEETT
T ss_pred             ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC------CCEEEEEeCC
Confidence            345566888999999998554                   447788889999999999999998      8999999999


Q ss_pred             CcEEEeeecCCccc-------ccccccCCCCCceEEEEeCC-----CcEEEEcCCCCcceeeeee----eecccCCCcc-
Q psy15191         75 KTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLETA----RVGEVGGNTL-  137 (312)
Q Consensus        75 g~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~-  137 (312)
                      |.|++||+.+++..       .+....+++++.++++++.+     +.|++||+...........    ....+..+.. 
T Consensus        96 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (369)
T 3zwl_B           96 YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL  175 (369)
T ss_dssp             TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred             CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence            99999999887763       33445567888899999999     9999999876543211111    1112223444 


Q ss_pred             -ceeEEEECCCCCeEEEeecCCeEEE-eccc-CceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE
Q psy15191        138 -GFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL  214 (312)
Q Consensus       138 -~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  214 (312)
                       .+.+++|+|+++++++++.+|.|++ |+++ ......+..|...|.+++|+|++++|++++.|+.|++||+++.+....
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~  255 (369)
T 3zwl_B          176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK  255 (369)
T ss_dssp             CCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence             8999999999999999999999999 8877 677777888999999999999999999999999999999999888877


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEeccCC--------------eEEEEecCCCCCCcccccccccceeEEeeccC
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--------------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG  280 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (312)
                      +.        +...+..++|+|+++++++++.++              .+++||+..+.            .+..+.+|.
T Consensus       256 ~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------------~~~~~~~~~  315 (369)
T 3zwl_B          256 YE--------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE------------EIGRVQGHF  315 (369)
T ss_dssp             EE--------CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC------------EEEEEECCS
T ss_pred             ec--------CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc------------chhheeccc
Confidence            76        566799999999999999999988              89999988763            677888999


Q ss_pred             cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       281 ~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..|++++|+|++++|++++.     ||.|++|
T Consensus       316 ~~v~~~~~s~~~~~l~s~~~-----dg~v~iw  342 (369)
T 3zwl_B          316 GPLNTVAISPQGTSYASGGE-----DGFIRLH  342 (369)
T ss_dssp             SCEEEEEECTTSSEEEEEET-----TSEEEEE
T ss_pred             CcEEEEEECCCCCEEEEEcC-----CCeEEEE
Confidence            99999999999999999955     4559998

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=6.5e-39  Score=260.91  Aligned_cols=235  Identities=15%  Similarity=0.139  Sum_probs=189.1

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC-------cc------------cccccccCCCCCceEEEE
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE-------GN------------YLPYHMRDDSKQLHLLSC  105 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~-------~~------------~~~~~~~~~~~~~~l~~~  105 (312)
                      .|...|.+++|+|+      |++|++++ |+++++||....       ..            ..+..+.+.+++ .++++
T Consensus        28 ~~~~~v~~~~fs~d------G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~   99 (344)
T 4gqb_B           28 CMERQLEAARYRSD------GALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVA   99 (344)
T ss_dssp             SCCSEEEEEEECTT------SCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEE
T ss_pred             cccCCEEEEEECCC------CCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEE
Confidence            57778999999999      99998887 778888873210       00            123334445553 78899


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      +.||+|++||+.+++.......   ...+|...|.+++|+|++++|++|+.|+.|++ |+++.+.+..+.+|...|.+++
T Consensus       100 s~dg~v~lWd~~~~~~~~~~~~---~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~  176 (344)
T 4gqb_B          100 SDSGAVELWELDENETLIVSKF---CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA  176 (344)
T ss_dssp             ETTSEEEEEEECTTSSCEEEEE---EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             ECCCEEEEEeccCCCceeEeec---cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence            9999999999998654433222   12378999999999999999999999999999 9988889999999999999999


Q ss_pred             ECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCCCc
Q psy15191        185 FSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       185 ~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      |+|++. +|++++.|+.|++||+++.+....+....     +...+++++|+|+ +++|++|+.||.|++||++++.   
T Consensus       177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~---  248 (344)
T 4gqb_B          177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA-----PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS---  248 (344)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----
T ss_pred             ecCCCCCceeeeccccccccccccccceeeeeecce-----eeccceeeeecCCCCcceEEeccCCcEEEEECCCCc---
Confidence            999875 78999999999999999888776654321     5556899999995 5688999999999999998763   


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                               ++..+.+|...|++++|+|++ ++|++|+.|+.     |+||
T Consensus       249 ---------~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-----i~vw  285 (344)
T 4gqb_B          249 ---------CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-----LAVL  285 (344)
T ss_dssp             ---------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-----EEEE
T ss_pred             ---------EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-----EEEE
Confidence                     678889999999999999998 58999965555     9998

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=9.4e-38  Score=252.14  Aligned_cols=231  Identities=20%  Similarity=0.228  Sum_probs=191.9

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~  103 (312)
                      ..+..+|.+|.+.|++++|+|+     ++++|++|+.|++|++|++.....             ..+..+.+++++.+++
T Consensus         7 ~~l~~~l~gH~~~V~~l~~~~~-----~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~   81 (319)
T 3frx_A            7 LVLRGTLEGHNGWVTSLATSAG-----QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL   81 (319)
T ss_dssp             EEEEEEECCCSSCEEEEEECSS-----CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred             EEEEEEEccccceEEEEEccCC-----CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE
Confidence            4567789999999999999986     147999999999999999864321             2344455678889999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.|++|++||+.+++  ....+     .+|...|.+++|+|++.++++++.|+.|++ |++ ......+.+|...|.+
T Consensus        82 s~s~D~~v~~wd~~~~~--~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~  153 (319)
T 3frx_A           82 SASWDKTLRLWDVATGE--TYQRF-----VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQ  153 (319)
T ss_dssp             EEETTSEEEEEETTTTE--EEEEE-----ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEE
T ss_pred             EEeCCCEEEEEECCCCC--eeEEE-----ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEE
Confidence            99999999999998843  33333     478999999999999999999999999999 554 2344556689999999


Q ss_pred             EEECCC------CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        183 LAFSPD------DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       183 ~~~~~~------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      +.|+|.      +..+++++.|+.|++||+++.+....+..       |...|.+++|+|++++|++++.||.|++||+.
T Consensus       154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-------h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~  226 (319)
T 3frx_A          154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-------HNSNINTLTASPDGTLIASAGKDGEIMLWNLA  226 (319)
T ss_dssp             EEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC-------CCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred             EEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC-------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            999995      45899999999999999998776666554       88899999999999999999999999999998


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ...            .+..+.. ...|.+++|+|++.+|++++.
T Consensus       227 ~~~------------~~~~~~~-~~~v~~~~~sp~~~~la~~~~  257 (319)
T 3frx_A          227 AKK------------AMYTLSA-QDEVFSLAFSPNRYWLAAATA  257 (319)
T ss_dssp             TTE------------EEEEEEC-CSCEEEEEECSSSSEEEEEET
T ss_pred             CCc------------EEEEecC-CCcEEEEEEcCCCCEEEEEcC
Confidence            762            4555554 467999999999999998853

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=5.5e-38  Score=278.86  Aligned_cols=274  Identities=19%  Similarity=0.202  Sum_probs=209.3

Q ss_pred             eEEEEeccCCCceEEEEEeCCC-------------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGEG-------------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~~-------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      +....+.+|.+.|++++|+++.                         +.....+.+|...|.+++|+|+      +++|+
T Consensus       373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~------g~~l~  446 (694)
T 3dm0_A          373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD------GQFAL  446 (694)
T ss_dssp             EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT------SSEEE
T ss_pred             chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC------CCEEE
Confidence            3445688899999998865543                         2334678899999999999999      99999


Q ss_pred             EecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         70 SCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      +|+.||+|+|||+.++...        .+..+.+++++.+|++++.|++|++||.......   . ......+|...|.+
T Consensus       447 sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~---~-~~~~~~~h~~~v~~  522 (694)
T 3dm0_A          447 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY---T-ISEGGEGHRDWVSC  522 (694)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE---E-ECSSTTSCSSCEEE
T ss_pred             EEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce---e-eccCCCCCCCcEEE
Confidence            9999999999999887652        3455566788889999999999999998653211   1 11223468888999


Q ss_pred             EEECCCC--CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        142 CKFGPRG--DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       142 ~~~~~~~--~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      ++|+|++  ..+++++.|+.|++ |+++.+....+.+|...|++++|+|++++|++++.||.|++||+++.+.+..+.  
T Consensus       523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--  600 (694)
T 3dm0_A          523 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--  600 (694)
T ss_dssp             EEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--
T ss_pred             EEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--
Confidence            9999987  57999999999999 888888888888999999999999999999999999999999999887665443  


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc-------eeEEeeccCcceeEEEeccC
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP-------EVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~s~~  291 (312)
                            +...|.+++|+|++.+|++++ ++.|++||+..+.....+.......       .......+...+++++|+|+
T Consensus       601 ------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd  673 (694)
T 3dm0_A          601 ------ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD  673 (694)
T ss_dssp             ------CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT
T ss_pred             ------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC
Confidence                  455699999999998887765 5569999998763211110000000       00000112224789999999


Q ss_pred             CCeEEEEecCCCcccceEEeC
Q psy15191        292 GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       292 ~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++|++|+.     ||.|+||
T Consensus       674 g~~l~sgs~-----Dg~i~iW  689 (694)
T 3dm0_A          674 GSTLFSGYT-----DGVIRVW  689 (694)
T ss_dssp             SSEEEEEET-----TSEEEEE
T ss_pred             CCEEEEEcC-----CCeEEEE
Confidence            999999955     5559999

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=9e-38  Score=259.46  Aligned_cols=263  Identities=17%  Similarity=0.255  Sum_probs=201.9

Q ss_pred             EEEeCCCCceE----EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------------
Q psy15191         30 VKWNGEGGKVL----YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------------   88 (312)
Q Consensus        30 ~~w~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------------   88 (312)
                      +.|++...+..    ....+|...|++++|+|+      |++||+|+ ++.+++|++.+++..                 
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspd------g~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~  115 (393)
T 1erj_A           43 ILYNPALPREIDVELHKSLDHTSVVCCVKFSND------GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLN  115 (393)
T ss_dssp             EEECTTSCCCEEEEEEEEEECSSCCCEEEECTT------SSEEEEEC-BSCEEEEETTTCCEEEEECC------------
T ss_pred             EEECCCCCcccCceeEEecCCCCEEEEEEECCC------CCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccccc
Confidence            34766554322    222369999999999999      99999987 789999999876542                 


Q ss_pred             ---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe
Q psy15191         89 ---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS  159 (312)
Q Consensus        89 ---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~  159 (312)
                               .+..+.+++++.+|++++.|+.|++||+.+.+  ....     +.+|...|.+++|+|++++|++++.|+.
T Consensus       116 ~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~-----~~~h~~~v~~~~~~p~~~~l~s~s~d~~  188 (393)
T 1erj_A          116 TSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMI-----LQGHEQDIYSLDYFPSGDKLVSGSGDRT  188 (393)
T ss_dssp             -----CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             ccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEE-----EccCCCCEEEEEEcCCCCEEEEecCCCc
Confidence                     13456678899999999999999999998743  2222     3478899999999999999999999999


Q ss_pred             EEE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC
Q psy15191        160 LHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD  237 (312)
Q Consensus       160 i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  237 (312)
                      +++ |+++.+....+. +...+.+++|+| ++++|++++.|+.|++||+++......+.........|...|.+++|+|+
T Consensus       189 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~  267 (393)
T 1erj_A          189 VRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD  267 (393)
T ss_dssp             EEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred             EEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence            999 777766666665 667899999999 89999999999999999999887776654332222338889999999999


Q ss_pred             CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        238 SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       238 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++|++|+.|+.|++||+................+...+.+|...|.+++|+|++++|++|+.|+     .|++|
T Consensus       268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~iw  337 (393)
T 1erj_A          268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----GVLFW  337 (393)
T ss_dssp             SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----EEEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-----eEEEE
Confidence            99999999999999999976533211111111225667889999999999999999999995554     49998

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.2e-37  Score=250.84  Aligned_cols=240  Identities=25%  Similarity=0.362  Sum_probs=202.3

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      ..+..++.+|.+.|++++|+|+      +++|++|+.||.|++|++.+++..        .+....+++++.+|++++.|
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~------~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d   86 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPN------GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD   86 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ceeEEEEcccCCcEEEEEECCC------CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence            5667889999999999999999      999999999999999999876552        34455667888899999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      +.|++||+++.+  .+...     .+|...|.+++|+|+++++++++.|+.|++ |+++.+....+..|...|.+++|+|
T Consensus        87 ~~i~vwd~~~~~--~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  159 (312)
T 4ery_A           87 KTLKIWDVSSGK--CLKTL-----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR  159 (312)
T ss_dssp             SEEEEEETTTCC--EEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred             CEEEEEECCCCc--EEEEE-----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC
Confidence            999999998744  22332     378889999999999999999999999999 8888888888889999999999999


Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      ++++|++++.|+.|++||+++.+.+..+...      +...+..++|+|++++|++++.||.|++||+..+.        
T Consensus       160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--------  225 (312)
T 4ery_A          160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK--------  225 (312)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCCEEEEECCS------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE--------
T ss_pred             CCCEEEEEeCCCcEEEEECCCCceeeEEecc------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------
Confidence            9999999999999999999988776655432      56678999999999999999999999999998763        


Q ss_pred             cccceeEEeeccCcceeE--EEe-ccCCCeEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQKLYGHGYEIYS--LAA-SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~~~~~~~~v~~--~~~-s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          .+..+.+|...+..  ..+ .+++.+|++|+.|     |.|++|
T Consensus       226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~vw  264 (312)
T 4ery_A          226 ----CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-----NLVYIW  264 (312)
T ss_dssp             ----EEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-----SCEEEE
T ss_pred             ----EEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-----CEEEEE
Confidence                56677777654332  233 4678999999554     459998

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=4.1e-37  Score=250.08  Aligned_cols=234  Identities=14%  Similarity=0.168  Sum_probs=200.8

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEEEEeC
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~  107 (312)
                      ....+|...|++++|+|+      +++|++++ ||.|++||+.++..             ..+..+.+++++.++++++.
T Consensus        45 ~~~~~h~~~v~~~~~~~~------~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  117 (337)
T 1gxr_A           45 INTLNHGEVVCAVTISNP------TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE  117 (337)
T ss_dssp             EEEECCSSCCCEEEECSS------SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred             ceeccCCCceEEEEEecC------CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence            344479999999999999      89999999 99999999987643             12344556788889999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      |+.|++||+.+.+.......     ..|...+.+++|+|+++++++++.++.+++ |+++.+....+..|...+.+++|+
T Consensus       118 d~~i~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~  192 (337)
T 1gxr_A          118 ASTLSIWDLAAPTPRIKAEL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  192 (337)
T ss_dssp             SSEEEEEECCCC--EEEEEE-----ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred             CCcEEEEECCCCCcceeeec-----ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence            99999999998653333332     367888999999999999999999999999 888888888888899999999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                      |++++|++++.|+.|++||+++.+....+.        +...+.+++|+|++++|++++.|+.|++||+...        
T Consensus       193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~--------  256 (337)
T 1gxr_A          193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD--------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP--------  256 (337)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTTEEEEEEE--------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS--------
T ss_pred             CCCCEEEEEecCCcEEEEECCCCceEeeec--------CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------
Confidence            999999999999999999999887776654        6677999999999999999999999999999876        


Q ss_pred             ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                           ....+..|...|.+++|+|++++|++++.     ||.|++|
T Consensus       257 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~  292 (337)
T 1gxr_A          257 -----DKYQLHLHESCVLSLKFAYCGKWFVSTGK-----DNLLNAW  292 (337)
T ss_dssp             -----CEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEE
T ss_pred             -----CeEEEcCCccceeEEEECCCCCEEEEecC-----CCcEEEE
Confidence                 34567789999999999999999999954     5559998

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2.4e-38  Score=259.39  Aligned_cols=239  Identities=15%  Similarity=0.139  Sum_probs=187.5

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecC------CCcEEEeeecCCccc------------ccccccCCCCCceEE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL------DKTAILWKYVSEGNY------------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~------dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~  103 (312)
                      ...+|...|++++|+|+      |++|++|+.      |+.|++|+..++...            .+..+.+.+++ .++
T Consensus        37 ~p~~H~~~V~~v~fSpD------G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l  109 (357)
T 4g56_B           37 APACMEVQIGAVRYRRD------GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GIL  109 (357)
T ss_dssp             ---CCCSEEEEEEECSS------SCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEE
T ss_pred             CcccccCCEEEEEECCC------CCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEE
Confidence            34579999999999999      999999997      778999987665431            23344455665 567


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.||+|++||+.+++.......   ...+|...|.+++|+|++++|++++.|+.|++ |.++.+....+.+|...|++
T Consensus       110 ~~s~dg~v~lWd~~~~~~~~~~~~---~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~  186 (357)
T 4g56_B          110 VASDSGAVELWEILEKESLLVNKF---AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC  186 (357)
T ss_dssp             EEETTSCEEEC--------CCCCE---EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             EEECCCEEEEeeccccceeEEEee---ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence            788999999999987554332221   22468899999999999999999999999999 88888888899999999999


Q ss_pred             EEECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCC
Q psy15191        183 LAFSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       183 ~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      ++|+|++. ++++++.|+.|++||+++.+....+....     +...+++++|+|++ .+|++|+.|+.|++||+..+. 
T Consensus       187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~-----~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-  260 (357)
T 4g56_B          187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA-----SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-  260 (357)
T ss_dssp             EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT-----CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-
T ss_pred             EEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc-----ccccccchhhhhcccceEEEeecccceeEEECCCCc-
Confidence            99999875 78999999999999999877654433221     66779999999974 688899999999999998763 


Q ss_pred             CcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                                 ++..+.+|...|++++|+|++ ++||+|+.|+.     |+||
T Consensus       261 -----------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-----i~iw  297 (357)
T 4g56_B          261 -----------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-----VAVL  297 (357)
T ss_dssp             -----------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-----EEEE
T ss_pred             -----------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-----EEEE
Confidence                       577888999999999999997 58999955555     9998

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.4e-36  Score=246.88  Aligned_cols=255  Identities=16%  Similarity=0.231  Sum_probs=208.3

Q ss_pred             EEeccCCCceEEEEEeCCCCc---------------------eEEEEc--cccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191         18 YTLTNHKSKVMAVKWNGEGGK---------------------VLYTLT--NHKSKVMAVKWVLNTSLDPEHKDLVSCSLD   74 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~~---------------------~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d   74 (312)
                      ....+|...|.+++|++++..                     .+..+.  +|...|.+++|+|+      +++|++++.|
T Consensus        45 ~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d  118 (337)
T 1gxr_A           45 INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD------GCTLIVGGEA  118 (337)
T ss_dssp             EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT------SSEEEEEESS
T ss_pred             ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC------CCEEEEEcCC
Confidence            334468888888887765421                     122233  68899999999999      8999999999


Q ss_pred             CcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         75 KTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        75 g~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      +.|++||+.+++.          ..+....+.+++.++++++.|+.|++||+++.+  ....     +..|...+.+++|
T Consensus       119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--~~~~-----~~~~~~~i~~~~~  191 (337)
T 1gxr_A          119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQ-----FQGHTDGASCIDI  191 (337)
T ss_dssp             SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSCEEEEEE
T ss_pred             CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--eeee-----eecccCceEEEEE
Confidence            9999999988763          123445567788899999999999999998743  2222     2367889999999


Q ss_pred             CCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        145 GPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       145 ~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      +|+++++++++.|+.+++ |+++.+....+. +...+.+++|+|++++|++++.|+.|++||+++.+.... ..      
T Consensus       192 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~-~~------  263 (337)
T 1gxr_A          192 SNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HL------  263 (337)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE-CC------
T ss_pred             CCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE-cC------
Confidence            999999999999999999 888777776665 788999999999999999999999999999998765432 22      


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                       |...|.+++|+|++++|++++.||.|++||+..+.            .+ ....|...|.+++|+|++++|++++.|+.
T Consensus       264 -~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~------------~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  329 (337)
T 1gxr_A          264 -HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA------------SI-FQSKESSSVLSCDISVDDKYIVTGSGDKK  329 (337)
T ss_dssp             -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------------EE-EEEECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             -CccceeEEEECCCCCEEEEecCCCcEEEEECCCCe------------EE-EEecCCCcEEEEEECCCCCEEEEecCCCe
Confidence             78889999999999999999999999999998763            22 33468899999999999999999965555


Q ss_pred             cccceEEeC
Q psy15191        304 PEHAAIIIW  312 (312)
Q Consensus       304 ~~dg~i~iW  312 (312)
                           |++|
T Consensus       330 -----i~iw  333 (337)
T 1gxr_A          330 -----ATVY  333 (337)
T ss_dssp             -----EEEE
T ss_pred             -----EEEE
Confidence                 9998

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=3.8e-37  Score=256.09  Aligned_cols=277  Identities=14%  Similarity=0.237  Sum_probs=217.0

Q ss_pred             EEEEeccCCCceEEEE-----------------EeCCCCc------eEEEEccccCcEEEEEEecCcCcCCCC---ceEE
Q psy15191         16 VLYTLTNHKSKVMAVK-----------------WNGEGGK------VLYTLTNHKSKVMAVKWVLNTSLDPEH---KDLV   69 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~-----------------w~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~---~~l~   69 (312)
                      ....+.+|.+.|++++                 |+.++++      .+..+.+|...|++++|+|+  ...++   ++|+
T Consensus         8 ~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~g~~~~~l~   85 (397)
T 1sq9_A            8 TANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA--IERDAFELCLVA   85 (397)
T ss_dssp             EEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEE--EETTTEEEEEEE
T ss_pred             hhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecc--cccCCccccEEE
Confidence            4456778888888887                 4444566      68888899999999999874  12236   7999


Q ss_pred             EecCCCcEEEeeecCCcc-----c-------------ccccccCC----CCCce-EEEEeCCCcEEEEcCCC------Cc
Q psy15191         70 SCSLDKTAILWKYVSEGN-----Y-------------LPYHMRDD----SKQLH-LLSCSMDKSIIVWAPDP------TT  120 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~-----~-------------~~~~~~~~----~~~~~-l~~~~~d~~i~i~d~~~------~~  120 (312)
                      +++.||.|++||+.+++.     .             .+..+.+.    +++.+ |++++.|+.|++||+.+      .+
T Consensus        86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  165 (397)
T 1sq9_A           86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  165 (397)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence            999999999999988763     1             23334456    78888 99999999999999987      33


Q ss_pred             cee-----eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc---c---CCceeEEEECCC
Q psy15191        121 GLW-----LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC---H---QLTITQLAFSPD  188 (312)
Q Consensus       121 ~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~---~---~~~v~~~~~~~~  188 (312)
                      ...     ...........|...+.+++|+|++ .+++++.++.+++ |+++.+....+..   |   ...|.+++|+|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~  244 (397)
T 1sq9_A          166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ  244 (397)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred             eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence            322     1110001113577889999999999 9999999999999 8888888888887   8   999999999999


Q ss_pred             CCEEEEEecC---CeEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        189 DTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       189 ~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +++|++++.|   +.|++||+++.+.+..+......      ...|...|.+++|+|++++|++++.||.|++||+..+.
T Consensus       245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  324 (397)
T 1sq9_A          245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE  324 (397)
T ss_dssp             TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred             CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence            9999999999   99999999988887776642110      01166789999999999999999999999999998763


Q ss_pred             CCcccccccccceeEEee------cc---------------CcceeEEEeccCC----------CeEEEEecCCCcccce
Q psy15191        260 TEEDLVQNTLWPEVQKLY------GH---------------GYEIYSLAASHDG----------TLLASACKATKPEHAA  308 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~s~s~d~~~~dg~  308 (312)
                                  .+..+.      +|               ...|++++|+|++          ++|++++.     ||.
T Consensus       325 ------------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~-----dg~  387 (397)
T 1sq9_A          325 ------------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCL-----DRS  387 (397)
T ss_dssp             ------------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEET-----TTE
T ss_pred             ------------eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecC-----CCc
Confidence                        566677      67               8999999999998          79999955     555


Q ss_pred             EEeC
Q psy15191        309 IIIW  312 (312)
Q Consensus       309 i~iW  312 (312)
                      |++|
T Consensus       388 i~iw  391 (397)
T 1sq9_A          388 IRWF  391 (397)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9998

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-37  Score=258.83  Aligned_cols=279  Identities=17%  Similarity=0.238  Sum_probs=220.6

Q ss_pred             ceEeC----CCCe------EEEEecc----------CCCceEEEEEeCCC------------------CceEEEEccccC
Q psy15191          7 DVVNG----EGGK------VLYTLTN----------HKSKVMAVKWNGEG------------------GKVLYTLTNHKS   48 (312)
Q Consensus         7 ~v~~~----~~~~------~~~~~~~----------h~~~v~~~~w~~~~------------------~~~~~~~~~h~~   48 (312)
                      .+|+.    .+++      ....+..          |...|.+++|++++                  ++.+..+.+|..
T Consensus        71 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~  150 (425)
T 1r5m_A           71 RLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRA  150 (425)
T ss_dssp             EEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCS
T ss_pred             EEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCc
Confidence            46777    7777      4555554          67789999877654                  456778888999


Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------------------cccccCCCCCceEEEE
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------------------PYHMRDDSKQLHLLSC  105 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------------------~~~~~~~~~~~~l~~~  105 (312)
                      .|.+++|+|+      +++|++++.|+.|++||+.+++...                       +....+.++ ..++++
T Consensus       151 ~v~~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  223 (425)
T 1r5m_A          151 PIVSVKWNKD------GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIP  223 (425)
T ss_dssp             CEEEEEECTT------SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEE
T ss_pred             cEEEEEECCC------CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEE
Confidence            9999999999      8999999999999999998776521                       333333444 468999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      +.++.|++||+.+.+..  ..     +..|...+.+++|+|++++|++++.++.+++ |+++.+....+..|...|.+++
T Consensus       224 ~~~g~i~~~d~~~~~~~--~~-----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~  296 (425)
T 1r5m_A          224 GPKGAIFVYQITEKTPT--GK-----LIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSAS  296 (425)
T ss_dssp             CGGGCEEEEETTCSSCS--EE-----ECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEE
T ss_pred             cCCCeEEEEEcCCCcee--ee-----eccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEE
Confidence            99999999999875422  22     2367889999999999999999999999999 7777777778888999999999


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      |+|++ ++++++.|+.|++||+++.+.+..+..       |...|.+++|+|++++|++++.||.|++||+.........
T Consensus       297 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~  368 (425)
T 1r5m_A          297 WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-------DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS  368 (425)
T ss_dssp             EETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-------TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----
T ss_pred             ECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-------CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee
Confidence            99999 999999999999999998887777665       7788999999999999999999999999999765310000


Q ss_pred             --------ccccccceeEEeeccCc--ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 --------VQNTLWPEVQKLYGHGY--EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 --------~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                              ......+.+..+.+|..  .|++++|+|++++|++++.|+.     |++|
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-----i~iw  421 (425)
T 1r5m_A          369 LYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE-----GSVV  421 (425)
T ss_dssp             ----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC-----CEEE
T ss_pred             eecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce-----EEEE
Confidence                    00011125777888876  9999999999999999965555     9998

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=6.5e-37  Score=253.59  Aligned_cols=269  Identities=14%  Similarity=0.168  Sum_probs=211.8

Q ss_pred             EeCCCCeEEEEeccCCCceEEEEEeCCC--------------------CceEEEEc--cccCcEEEEEEec-CcCcCCCC
Q psy15191          9 VNGEGGKVLYTLTNHKSKVMAVKWNGEG--------------------GKVLYTLT--NHKSKVMAVKWVL-NTSLDPEH   65 (312)
Q Consensus         9 ~~~~~~~~~~~~~~h~~~v~~~~w~~~~--------------------~~~~~~~~--~h~~~v~~~~~~~-~~~~~~~~   65 (312)
                      +.....+....+.+|...|.+++|++++                    ++....+.  +|...|.+++|+| +      +
T Consensus        58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~------~  131 (383)
T 3ei3_B           58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN------T  131 (383)
T ss_dssp             HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE------E
T ss_pred             ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC------C
Confidence            4446678888899999999999988765                    23334443  6999999999999 5      7


Q ss_pred             ceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN  135 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  135 (312)
                      .+|++++.|+.|++||+.....          ..+....+++++.++++++.|+.|++||++.   ......     ..|
T Consensus       132 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~-----~~h  203 (383)
T 3ei3_B          132 NQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKE-----KLH  203 (383)
T ss_dssp             EEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEE-----ECS
T ss_pred             CEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEe-----ccC
Confidence            8999999999999999986433          1244555677888999999999999999953   222232     378


Q ss_pred             ccceeEEEECCCCC-eEEEeecCCeEEE-eccc----CceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccC
Q psy15191        136 TLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTT----WKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       136 ~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      ...|.+++|+|+++ ++++++.|+.|++ |+++    ......+ +|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus       204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~  282 (383)
T 3ei3_B          204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD  282 (383)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred             CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence            89999999999999 8999999999999 7776    4444444 6999999999999 999999999999999999998


Q ss_pred             CCeEEEEeccCCCCcccc----------eeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        209 SGRLSLVACSDKTNGVHK----------RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      .+....+.........|.          ..+..++|+|++++  +++.||.|++||+.++.            .+..+.+
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~------------~~~~l~~  348 (383)
T 3ei3_B          283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG------------LVHQLRD  348 (383)
T ss_dssp             TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC------------EEEEECB
T ss_pred             CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc------------eeeeecC
Confidence            877665554332221122          34555777788877  78899999999998774            5677776


Q ss_pred             --cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        279 --HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       279 --~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                        |...+..++|+|++++|++|+ |+.     |+||
T Consensus       349 ~~~~~~~~~~~~s~~g~~l~s~s-d~~-----i~iw  378 (383)
T 3ei3_B          349 PNAAGIISLNKFSPTGDVLASGM-GFN-----ILIW  378 (383)
T ss_dssp             TTBCSCCCEEEECTTSSEEEEEE-TTE-----EEEE
T ss_pred             CCCCceEEEEEEecCccEEEEec-CCc-----EEEE
Confidence              567788889999999999994 444     9998

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.2e-36  Score=250.84  Aligned_cols=276  Identities=13%  Similarity=0.152  Sum_probs=212.4

Q ss_pred             CCCeEEEEeccCCCceEEEEEeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--
Q psy15191         12 EGGKVLYTLTNHKSKVMAVKWNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN--   87 (312)
Q Consensus        12 ~~~~~~~~~~~h~~~v~~~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~--   87 (312)
                      ++++.+.+-. ..+.|  ..|+.++++  .+..+.+|...|++++|+|+      +++|++++.||.|++||+.+++.  
T Consensus        18 ~~~~~l~~~~-~d~~v--~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~~~~~dg~i~vwd~~~~~~~~   88 (372)
T 1k8k_C           18 KDRTQIAICP-NNHEV--HIYEKSGNKWVQVHELKEHNGQVTGVDWAPD------SNRIVTCGTDRNAYVWTLKGRTWKP   88 (372)
T ss_dssp             TTSSEEEEEC-SSSEE--EEEEEETTEEEEEEEEECCSSCEEEEEEETT------TTEEEEEETTSCEEEEEEETTEEEE
T ss_pred             CCCCEEEEEe-CCCEE--EEEeCCCCcEEeeeeecCCCCcccEEEEeCC------CCEEEEEcCCCeEEEEECCCCeeee
Confidence            4455555442 22222  227777777  88999999999999999999      89999999999999999987753  


Q ss_pred             --------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe
Q psy15191         88 --------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS  159 (312)
Q Consensus        88 --------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~  159 (312)
                              ..+....+++++.++++++.|+.|++||++..........   ....|...|.+++|+|+++++++++.|+.
T Consensus        89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  165 (372)
T 1k8k_C           89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH---IKKPIRSTVLSLDWHPNSVLLAAGSCDFK  165 (372)
T ss_dssp             EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE---ECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred             eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee---eecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence                    1344455678888999999999999999987553221111   12367889999999999999999999999


Q ss_pred             EEE-ec------------------ccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        160 LHL-DV------------------TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       160 i~~-d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      +++ |+                  .+.+....+..|...|.+++|+|++++|++++.|+.|++||+++.+.+..+..   
T Consensus       166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---  242 (372)
T 1k8k_C          166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS---  242 (372)
T ss_dssp             EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC---
T ss_pred             EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc---
Confidence            999 63                  34556666768999999999999999999999999999999999988887775   


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC--CC--CCccccc-----------cccc-------cee-----
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE--PP--TEEDLVQ-----------NTLW-------PEV-----  273 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~--~~~~~~~-----------~~~~-------~~~-----  273 (312)
                          |...|.+++|+|++++|+++ .|+.|++|++..  +.  .......           .+.|       +..     
T Consensus       243 ----~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (372)
T 1k8k_C          243 ----ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA  317 (372)
T ss_dssp             ----SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred             ----CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence                77789999999999999888 899999999987  31  0000000           0000       011     


Q ss_pred             -EEe-eccCcceeEEEec-cCC---CeEEEEecCCCcccceEEeC
Q psy15191        274 -QKL-YGHGYEIYSLAAS-HDG---TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       274 -~~~-~~~~~~v~~~~~s-~~~---~~l~s~s~d~~~~dg~i~iW  312 (312)
                       ..+ .+|...|++++|+ ++|   ++|++|+     .||.|++|
T Consensus       318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~-----~Dg~i~~W  357 (372)
T 1k8k_C          318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTG-----MDGGMSIW  357 (372)
T ss_dssp             -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEE-----TTSEEEEE
T ss_pred             cccccccccCCcceeEEecCCCcceeeEEEec-----CCCceEEE
Confidence             233 4899999999976 666   9999995     45559999

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.5e-36  Score=247.66  Aligned_cols=238  Identities=18%  Similarity=0.258  Sum_probs=185.0

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------cccccccCCCCCceE
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSKQLHL  102 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~~~~l  102 (312)
                      ++...+.+|.+.|++++|.+.....+++++|+||+.|++|++||+...+.               ..+..+.+++++.++
T Consensus        12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l   91 (343)
T 2xzm_R           12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA   91 (343)
T ss_dssp             EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred             eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence            45678999999999999932111111489999999999999999975431               134445567888899


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee----ee---cc
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ----TL---PC  175 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~----~~---~~  175 (312)
                      ++++.|++|++||+++++  ....+     .+|...|.+++|+|++++|++++.|+.|++    |++..    ..   ..
T Consensus        92 ~s~s~D~~v~lwd~~~~~--~~~~~-----~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~----wd~~~~~~~~~~~~~~  160 (343)
T 2xzm_R           92 ISSSWDKTLRLWDLRTGT--TYKRF-----VGHQSEVYSVAFSPDNRQILSAGAEREIKL----WNILGECKFSSAEKEN  160 (343)
T ss_dssp             EEEETTSEEEEEETTSSC--EEEEE-----ECCCSCEEEEEECSSTTEEEEEETTSCEEE----EESSSCEEEECCTTTS
T ss_pred             EEEcCCCcEEEEECCCCc--EEEEE-----cCCCCcEEEEEECCCCCEEEEEcCCCEEEE----EeccCCceeeeecccC
Confidence            999999999999998843  22332     378899999999999999999999999999    54421    11   26


Q ss_pred             cCCceeEEEECCCC----------CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        176 HQLTITQLAFSPDD----------THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       176 ~~~~v~~~~~~~~~----------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      |...|.+++|+|++          .+|++++.|+.|++||.. ......+..       |...|++++|+|++++|++|+
T Consensus       161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~-------h~~~v~~~~~s~~g~~l~sgs  232 (343)
T 2xzm_R          161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKA-------HESNVNHLSISPNGKYIATGG  232 (343)
T ss_dssp             CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEEC-------CSSCEEEEEECTTSSEEEEEE
T ss_pred             CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcC-------ccccceEEEECCCCCEEEEEc
Confidence            88899999999987          789999999999999943 344444443       888899999999999999999


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .||.|++||+.....           ....+ .+...|.+++|+|++.+|+++ .|+.     |++|
T Consensus       233 ~dg~v~iwd~~~~~~-----------~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~-----v~iw  281 (343)
T 2xzm_R          233 KDKKLLIWDILNLTY-----------PQREF-DAGSTINQIAFNPKLQWVAVG-TDQG-----VKIF  281 (343)
T ss_dssp             TTCEEEEEESSCCSS-----------CSEEE-ECSSCEEEEEECSSSCEEEEE-ESSC-----EEEE
T ss_pred             CCCeEEEEECCCCcc-----------cceee-cCCCcEEEEEECCCCCEEEEE-CCCC-----EEEE
Confidence            999999999954321           22222 345679999999999887655 3444     8887

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.7e-37  Score=257.48  Aligned_cols=286  Identities=15%  Similarity=0.111  Sum_probs=213.7

Q ss_pred             eEeCCCCeEEEEe-ccCCCceEEEEEeC-CCCce-------------------------EEEEccccCcEEEEEEecCcC
Q psy15191          8 VVNGEGGKVLYTL-TNHKSKVMAVKWNG-EGGKV-------------------------LYTLTNHKSKVMAVKWVLNTS   60 (312)
Q Consensus         8 v~~~~~~~~~~~~-~~h~~~v~~~~w~~-~~~~~-------------------------~~~~~~h~~~v~~~~~~~~~~   60 (312)
                      .|+ .+++.+..+ .+|.+.|++++|++ ++..+                         ...+ +|...|++++|+|+  
T Consensus        47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~--  122 (437)
T 3gre_A           47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN--  122 (437)
T ss_dssp             GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT--
T ss_pred             ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC--
Confidence            355 568899999 89999999999999 54211                         1112 58899999999998  


Q ss_pred             cCCCCceEEEecCCCcEEEeeec---CCccc---------cccccc-------------CCCCCceEEEEeCCCcEEEEc
Q psy15191         61 LDPEHKDLVSCSLDKTAILWKYV---SEGNY---------LPYHMR-------------DDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        61 ~~~~~~~l~s~~~dg~i~vw~~~---~~~~~---------~~~~~~-------------~~~~~~~l~~~~~d~~i~i~d  115 (312)
                          +++|++|+.||.|++||++   .++..         .+.+.+             .++++.++++++.|+.|++||
T Consensus       123 ----~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd  198 (437)
T 3gre_A          123 ----FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD  198 (437)
T ss_dssp             ----SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred             ----CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence                8999999999999999995   33221         111111             346688999999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEEC----CCC
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFS----PDD  189 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~----~~~  189 (312)
                      +++.+.  +..+.   ...|...|.+++|+|++++|++++.||.|++ |+++.+....+. .|...|.+++|+    |++
T Consensus       199 ~~~~~~--~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~  273 (437)
T 3gre_A          199 IRTLER--LQIIE---NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS  273 (437)
T ss_dssp             TTTCCE--EEEEE---CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE
T ss_pred             CCCCee--eEEEc---cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc
Confidence            988543  22222   0127789999999999999999999999999 888877777765 688899999665    468


Q ss_pred             CEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-------------------cccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-------------------GVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                      .+|++++.||.|++||+++.+....+.......                   ..|...|++++|+ ++++|++|+.||.|
T Consensus       274 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i  352 (437)
T 3gre_A          274 VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI  352 (437)
T ss_dssp             EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred             cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence            899999999999999999888777776442111                   1166779999999 78999999999999


Q ss_pred             EEEecCCCCCCccccccc-------------------------ccceeEEeeccCcceeEEEeccC--CCeEEEEecCCC
Q psy15191        251 VVWGLGEPPTEEDLVQNT-------------------------LWPEVQKLYGHGYEIYSLAASHD--GTLLASACKATK  303 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~s~d~~  303 (312)
                      ++||+.++.....+....                         ..........|...|++++|+++  +.+|++|+.|  
T Consensus       353 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d--  430 (437)
T 3gre_A          353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS--  430 (437)
T ss_dssp             EEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT--
T ss_pred             EEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC--
Confidence            999998875432221100                         00011112348999999999998  8899999554  


Q ss_pred             cccceEEeC
Q psy15191        304 PEHAAIIIW  312 (312)
Q Consensus       304 ~~dg~i~iW  312 (312)
                         |.|+||
T Consensus       431 ---G~I~iw  436 (437)
T 3gre_A          431 ---GLIGIF  436 (437)
T ss_dssp             ---SCEEEE
T ss_pred             ---ceEEEe
Confidence               559999

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.4e-37  Score=252.54  Aligned_cols=250  Identities=17%  Similarity=0.302  Sum_probs=194.4

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCCC--CceEEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDSK--QLHLLS  104 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~~--~~~l~~  104 (312)
                      |+++..+.+|.+.|++++|+|+      +++|++|+.||.|++||+....  .        ..+..+.+.++  +.+|++
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s   74 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYY------GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILAS   74 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSS------SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred             CCccEEecCCcccEEEEEEcCC------CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEE
Confidence            4567788999999999999999      8999999999999999997432  2        12334444544  779999


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCc--eeeeecccCCc
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQLT  179 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~~~  179 (312)
                      ++.||.|++||+.+.+......     ...|...|.+++|+|+  ++++++++.|+.|++ |+++..  ....+..|...
T Consensus        75 ~~~dg~v~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  149 (379)
T 3jrp_A           75 CSYDGKVLIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG  149 (379)
T ss_dssp             EETTSCEEEEEEETTEEEEEEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred             eccCCEEEEEEcCCCceeEeee-----ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence            9999999999998754223222     2368889999999999  999999999999999 665553  23344578999


Q ss_pred             eeEEEECC-------------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC---CceEEE
Q psy15191        180 ITQLAFSP-------------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD---SRYFLT  243 (312)
Q Consensus       180 v~~~~~~~-------------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s  243 (312)
                      |.+++|+|             ++.+|++++.|+.|++||+++...........   ..|...|.+++|+|+   +++|++
T Consensus       150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~h~~~v~~~~~sp~~~~~~~l~s  226 (379)
T 3jrp_A          150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAWSPTVLLRSYLAS  226 (379)
T ss_dssp             EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEECCCCSSSEEEEE
T ss_pred             eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE---ecccCcEeEEEECCCCCCCCeEEE
Confidence            99999999             69999999999999999998765432221111   117888999999999   899999


Q ss_pred             eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++.||.|++||+..+.....       ..+.....|...|++++|+|++++|++++.|+.     |++|
T Consensus       227 ~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-----i~iw  283 (379)
T 3jrp_A          227 VSQDRTCIIWTQDNEQGPWK-------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-----VTLW  283 (379)
T ss_dssp             EETTSCEEEEEESSTTSCCE-------EEESSSSCCSSCEEEEEECSSSCCEEEEESSSS-----EEEE
T ss_pred             EeCCCEEEEEeCCCCCccce-------eeeeccccCCCcEEEEEEcCCCCEEEEecCCCc-----EEEE
Confidence            99999999999987642210       022223448889999999999999999965555     9998

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.9e-36  Score=253.71  Aligned_cols=244  Identities=20%  Similarity=0.312  Sum_probs=198.7

Q ss_pred             EeCCCCceEEEEc--cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc------ccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLT--NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH------MRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~------~~~~~~~~~l~  103 (312)
                      ||..++++...+.  +|...|++|+|+|+      |++|++|+.||+|+|||+.+++......      .....++..++
T Consensus       130 Wd~~tg~~~~~~~~~~~~~~V~sv~fspd------g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~  203 (420)
T 4gga_A          130 WSASSGDILQLLQMEQPGEYISSVAWIKE------GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS  203 (420)
T ss_dssp             EETTTCCEEEEEECCSTTCCEEEEEECTT------SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEE
T ss_pred             EECCCCCEEEEEEecCCCCcEEEEEECCC------CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEE
Confidence            9999999887765  67788999999999      9999999999999999999887632211      11123556899


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc----eeeeecccCC
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK----QIQTLPCHQL  178 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~----~~~~~~~~~~  178 (312)
                      +++.|+.+++||.......      ...+.+|...+..+.++|+++++++++.|+.+++ +..+.+    .......|..
T Consensus       204 sgs~d~~i~~~d~~~~~~~------~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~  277 (420)
T 4gga_A          204 SGSRSGHIHHHDVRVAEHH------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG  277 (420)
T ss_dssp             EEETTSEEEEEETTSSSCE------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS
T ss_pred             EEeCCCceeEeeeccccee------eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC
Confidence            9999999999998864322      1223478889999999999999999999999999 555443    2334557899


Q ss_pred             ceeEEEECCCCC-EEEE--EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec--cCCeEEEE
Q psy15191        179 TITQLAFSPDDT-HLVS--VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS--RDGVCVVW  253 (312)
Q Consensus       179 ~v~~~~~~~~~~-~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iw  253 (312)
                      .|.+++|+|++. .+++  |+.|+.|++||+.++.....+.        +...+.++.|+|+++.+++++  .|+.|+||
T Consensus       278 ~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--------~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iw  349 (420)
T 4gga_A          278 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AHSQVCSILWSPHYKELISGHGFAQNQLVIW  349 (420)
T ss_dssp             CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--------CSSCEEEEEEETTTTEEEEEECTTTCCEEEE
T ss_pred             ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--------cccceeeeeecCCCCeEEEEEecCCCEEEEE
Confidence            999999999654 4544  4579999999999988877766        455688999999999888764  79999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+.++.            ++..+.+|.+.|++++|+|+|++|+|||.|     ++|+||
T Consensus       350 d~~~~~------------~v~~l~gH~~~V~~l~~spdg~~l~S~s~D-----~tvriW  391 (420)
T 4gga_A          350 KYPTMA------------KVAELKGHTSRVLSLTMSPDGATVASAAAD-----ETLRLW  391 (420)
T ss_dssp             ETTTCC------------EEEEECCCSSCEEEEEECTTSSCEEEEETT-----TEEEEE
T ss_pred             ECCCCc------------EEEEEcCCCCCEEEEEEcCCCCEEEEEecC-----CeEEEE
Confidence            998763            788899999999999999999999999555     559999

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-35  Score=238.41  Aligned_cols=253  Identities=15%  Similarity=0.171  Sum_probs=207.6

Q ss_pred             CeEEEEeccCCCceEEEE------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191         14 GKVLYTLTNHKSKVMAVK------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK   75 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg   75 (312)
                      .+.+.++.+|.+.|.+++                  |+..+++....+..|...|.+++|+|+      +++|++++.||
T Consensus         8 ~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg   81 (313)
T 3odt_A            8 YQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSE------KELLLFGGKDT   81 (313)
T ss_dssp             CEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETT------TTEEEEEETTS
T ss_pred             HHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCC------CCEEEEecCCC
Confidence            478888999999999988                  555556777888899999999999999      89999999999


Q ss_pred             cEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         76 TAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        76 ~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      .|++|++......           .+....+  ++.++++++.|+.|++||.    .......     ..|...+.+++|
T Consensus        82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~----~~~~~~~-----~~~~~~v~~~~~  150 (313)
T 3odt_A           82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE----GSLVYNL-----QAHNASVWDAKV  150 (313)
T ss_dssp             CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET----TEEEEEE-----ECCSSCEEEEEE
T ss_pred             eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC----CcEEEec-----ccCCCceeEEEE
Confidence            9999998765321           1122222  4568999999999999992    2222222     367889999999


Q ss_pred             CC-CCCeEEEeecCCeEEE-ecccCceeeeecc-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC
Q psy15191        145 GP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPC-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT  221 (312)
Q Consensus       145 ~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  221 (312)
                      .| +++.+++++.++.+++ |  ..+....+.. |...+.+++|+|++. +++++.||.|++||+++.+.+..+..    
T Consensus       151 ~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~----  223 (313)
T 3odt_A          151 VSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG----  223 (313)
T ss_dssp             EETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred             ccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc----
Confidence            88 9999999999999999 4  1223334444 889999999999998 99999999999999999888887775    


Q ss_pred             CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                         |...|++++|+|++ .|++++.||.|++||+.++.            .+..+..|...|.+++|+|+++ +++++.|
T Consensus       224 ---~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~------------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d  286 (313)
T 3odt_A          224 ---HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS------------LKQVITLPAISIWSVDCMSNGD-IIVGSSD  286 (313)
T ss_dssp             ---CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC------------EEEEEECSSSCEEEEEECTTSC-EEEEETT
T ss_pred             ---CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc------------eeEEEeccCceEEEEEEccCCC-EEEEeCC
Confidence               78889999999999 68999999999999998873            6778888999999999999998 5678555


Q ss_pred             CCcccceEEeC
Q psy15191        302 TKPEHAAIIIW  312 (312)
Q Consensus       302 ~~~~dg~i~iW  312 (312)
                      +.     |++|
T Consensus       287 g~-----i~iw  292 (313)
T 3odt_A          287 NL-----VRIF  292 (313)
T ss_dssp             SC-----EEEE
T ss_pred             Cc-----EEEE
Confidence            44     9998

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.1e-36  Score=250.33  Aligned_cols=265  Identities=18%  Similarity=0.273  Sum_probs=204.9

Q ss_pred             eccCCCceEEEEEeCC-----------------------CCceEEEEcc-----ccCcEEEEEEecCcCcCCCCceEEEe
Q psy15191         20 LTNHKSKVMAVKWNGE-----------------------GGKVLYTLTN-----HKSKVMAVKWVLNTSLDPEHKDLVSC   71 (312)
Q Consensus        20 ~~~h~~~v~~~~w~~~-----------------------~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~l~s~   71 (312)
                      ..+|...|++++|+|.                       +++.+..+..     |...|++++|+|+  ...++.+|++|
T Consensus        14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~l~~~   91 (366)
T 3k26_A           14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYD--SNTSHPLLAVA   91 (366)
T ss_dssp             ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEEC--TTTCCEEEEEE
T ss_pred             ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccC--CCCCCCEEEEe
Confidence            3467888888887763                       2334444443     5577999999998  11125689999


Q ss_pred             cCCCcEEEeeecCCccc--------ccccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191         72 SLDKTAILWKYVSEGNY--------LPYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC  142 (312)
Q Consensus        72 ~~dg~i~vw~~~~~~~~--------~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~  142 (312)
                      +.||.|++||+.+++..        .+..+.+++ ++.++++++.||.|++||+++.+..  ...  .....|...|.++
T Consensus        92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~--~~~~~~~~~v~~~  167 (366)
T 3k26_A           92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV--AIF--GGVEGHRDEVLSA  167 (366)
T ss_dssp             ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE--EEE--CSTTSCSSCEEEE
T ss_pred             cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE--EEe--cccccccCceeEE
Confidence            99999999999887652        344455567 7889999999999999999875422  221  1224688899999


Q ss_pred             EECCCCCeEEEeecCCeEEE-ecccCceeeeec----------------------------ccCCceeEEEECCCCCEEE
Q psy15191        143 KFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP----------------------------CHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~l~  193 (312)
                      +|+|++++|++++.||.|++ |+++.+....+.                            .|...|.+++|+  +++|+
T Consensus       168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  245 (366)
T 3k26_A          168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL  245 (366)
T ss_dssp             EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred             EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence            99999999999999999999 655544433332                            289999999998  77999


Q ss_pred             EEecCCeEEEEEccCCCe--------------EEEEeccCCCCcccceeeEEEEEcCC--CceEEEeccCCeEEEEecCC
Q psy15191        194 SVSRDRRWGLYKRQSSGR--------------LSLVACSDKTNGVHKRIIWGVAWSHD--SRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~  257 (312)
                      +++.|+.|++||+++...              +..+..       |...|++++|+|+  +++|++++.||.|++||+..
T Consensus       246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~  318 (366)
T 3k26_A          246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY-------SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV  318 (366)
T ss_dssp             EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC-------SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred             EEecCCEEEEEeCCCccccccccccCCcchheeccccc-------cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence            999999999999987654              333332       6778999999999  99999999999999999987


Q ss_pred             CCCCcccccccccceeEEeecc--CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        258 PPTEEDLVQNTLWPEVQKLYGH--GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +....        .....+.+|  ...|++++|+|++++|++++.     ||.|++|
T Consensus       319 ~~~~~--------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-----dg~i~iw  362 (366)
T 3k26_A          319 EDPHK--------AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD-----DASIWRW  362 (366)
T ss_dssp             SSGGG--------CEEEEECCTTCCSCEEEEEECTTSSEEEEEET-----TSEEEEE
T ss_pred             CCCcc--------ccceEEcccccCCceEEEEeCCCCCeEEEEeC-----CCEEEEE
Confidence            64221        145567777  789999999999999999954     5559998

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.6e-36  Score=248.62  Aligned_cols=244  Identities=16%  Similarity=0.224  Sum_probs=202.9

Q ss_pred             EeCCCCceEEEEcc-ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceE
Q psy15191         32 WNGEGGKVLYTLTN-HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHL  102 (312)
Q Consensus        32 w~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l  102 (312)
                      |+..+++....+.. |...|++++|+|+      +++|++|+.||.|++||+.+++...        +....+  ++..+
T Consensus       118 w~~~~~~~~~~~~~~~~~~v~~v~~s~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l  189 (401)
T 4aez_A          118 WNADSGSVSALAETDESTYVASVKWSHD------GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL  189 (401)
T ss_dssp             EETTTCCEEEEEECCTTCCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred             eeCCCCcEeEeeecCCCCCEEEEEECCC------CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence            88888988888776 8899999999999      8999999999999999998876532        222222  44589


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~  181 (312)
                      ++++.|+.|++||++..... ..     .+.+|...|.+++|+|++++|++++.|+.|++ |+++......+..|...|.
T Consensus       190 ~~~~~dg~i~i~d~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~  263 (401)
T 4aez_A          190 SSGSRSGAIHHHDVRIANHQ-IG-----TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK  263 (401)
T ss_dssp             EEEETTSEEEEEETTSSSCE-EE-----EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCC
T ss_pred             EEEcCCCCEEEEecccCcce-ee-----EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEE
Confidence            99999999999999853321 12     23478889999999999999999999999999 8888888888888999999


Q ss_pred             EEEECCCCC-EEEEEe--cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE--eccCCeEEEEecC
Q psy15191        182 QLAFSPDDT-HLVSVS--RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT--ISRDGVCVVWGLG  256 (312)
Q Consensus       182 ~~~~~~~~~-~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~  256 (312)
                      +++|+|++. ++++++  .|+.|++||+++.+....+.        +...|.+++|+|++++|++  |+.||.|++||+.
T Consensus       264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~  335 (401)
T 4aez_A          264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--------AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS  335 (401)
T ss_dssp             EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--------CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred             EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--------CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence            999999765 555554  79999999999988887775        5667999999999999998  5589999999998


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+..          .....+.+|...|.+++|+|+|++|++++     .||.|++|
T Consensus       336 ~~~~----------~~~~~~~~h~~~v~~~~~s~dg~~l~s~~-----~dg~i~iw  376 (401)
T 4aez_A          336 SSGL----------TKQVDIPAHDTRVLYSALSPDGRILSTAA-----SDENLKFW  376 (401)
T ss_dssp             TTEE----------EEEEEEECCSSCCCEEEECTTSSEEEEEC-----TTSEEEEE
T ss_pred             Cccc----------eeEEEecCCCCCEEEEEECCCCCEEEEEe-----CCCcEEEE
Confidence            7521          14455778999999999999999999995     55559998

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-37  Score=256.86  Aligned_cols=287  Identities=16%  Similarity=0.175  Sum_probs=219.4

Q ss_pred             CceEeCCCCe---EEEEeccCCCceEEEEEeCCC-----------------------CceEEEEccccCcEEEEEEecCc
Q psy15191          6 GDVVNGEGGK---VLYTLTNHKSKVMAVKWNGEG-----------------------GKVLYTLTNHKSKVMAVKWVLNT   59 (312)
Q Consensus         6 ~~v~~~~~~~---~~~~~~~h~~~v~~~~w~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~   59 (312)
                      -++|+..+++   .+..+ .|...|.+++|++++                       .+.+..+.+|...|++++|+|+ 
T Consensus        47 v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-  124 (416)
T 2pm9_A           47 LELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK-  124 (416)
T ss_dssp             CEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS-
T ss_pred             EEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC-
Confidence            3578887775   44444 478889998866643                       2477788899999999999986 


Q ss_pred             CcCCCCceEEEecCCCcEEEeeecCCc------c-----------cccccccCCCC-CceEEEEeCCCcEEEEcCCCCcc
Q psy15191         60 SLDPEHKDLVSCSLDKTAILWKYVSEG------N-----------YLPYHMRDDSK-QLHLLSCSMDKSIIVWAPDPTTG  121 (312)
Q Consensus        60 ~~~~~~~~l~s~~~dg~i~vw~~~~~~------~-----------~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~  121 (312)
                          ++.+|++++.|+.|++||+.+++      .           ..+..+.++++ +.++++++.|+.|++||+++.+.
T Consensus       125 ----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~  200 (416)
T 2pm9_A          125 ----QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE  200 (416)
T ss_dssp             ----STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred             ----CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence                26799999999999999998876      2           12334445666 67899999999999999998543


Q ss_pred             eeeeeeee-cccCCCccceeEEEECCCC-CeEEEeecCC---eEEE-ecccC-ceeeeec-ccCCceeEEEECC-CCCEE
Q psy15191        122 LWLETARV-GEVGGNTLGFYGCKFGPRG-DYIIAHGFQG---SLHL-DVTTW-KQIQTLP-CHQLTITQLAFSP-DDTHL  192 (312)
Q Consensus       122 ~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~---~i~~-d~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l  192 (312)
                      .  ..... ....+|...+.+++|+|++ .++++++.++   .|++ |+++. .....+. +|...|.+++|+| ++++|
T Consensus       201 ~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l  278 (416)
T 2pm9_A          201 V--IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLL  278 (416)
T ss_dssp             E--EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCE
T ss_pred             c--eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeE
Confidence            2  22221 1112337889999999997 6899999998   9999 77775 4556666 7999999999999 99999


Q ss_pred             EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCccccc-----
Q psy15191        193 VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQ-----  266 (312)
Q Consensus       193 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----  266 (312)
                      ++++.|+.|++||+++.+.+..+..       |...|.+++|+|++ .+|++++.||.|++||+...........     
T Consensus       279 ~s~~~dg~v~~wd~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~  351 (416)
T 2pm9_A          279 LSSGRDNTVLLWNPESAEQLSQFPA-------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ  351 (416)
T ss_dssp             EEEESSSEEEEECSSSCCEEEEEEC-------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------
T ss_pred             EEEeCCCCEEEeeCCCCccceeecC-------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc
Confidence            9999999999999999988887775       77889999999999 8999999999999999987654322110     


Q ss_pred             ----ccccce--------------eEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        267 ----NTLWPE--------------VQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       267 ----~~~~~~--------------~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          ...|..              +.....|..++.+++|+|+|++|++++     .|+.|+||
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~-----~d~~v~~w  410 (416)
T 2pm9_A          352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITP-----DGKGVSIT  410 (416)
T ss_dssp             ---------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCT-----TSSCBCCB
T ss_pred             cCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeC-----CCCeEEEE
Confidence                000000              011122677888999999999999995     45559999

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.3e-37  Score=261.20  Aligned_cols=262  Identities=9%  Similarity=0.003  Sum_probs=195.0

Q ss_pred             EeCCCCceE----EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------------
Q psy15191         32 WNGEGGKVL----YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------------   88 (312)
Q Consensus        32 w~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------------   88 (312)
                      |+.++++..    ..+.+|.+.|++++|+|+...++++.+||+++.||+|++||+..+...                   
T Consensus       188 Wd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~  267 (524)
T 2j04_B          188 FKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS  267 (524)
T ss_dssp             EEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT
T ss_pred             EEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC
Confidence            887776642    456778899999999997444455789999999999999999765321                   


Q ss_pred             ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE--EECCCC-CeEEEeecCCeEEE-ec
Q psy15191         89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC--KFGPRG-DYIIAHGFQGSLHL-DV  164 (312)
Q Consensus        89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~~~i~~-d~  164 (312)
                      .+..+.++++ ..|++|+.||+|++||+++....      ...+.+|...|.++  +|+|++ .+|++++.|+.|++ |+
T Consensus       268 ~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~------~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~  340 (524)
T 2j04_B          268 LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVP------SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP  340 (524)
T ss_dssp             CEEEEEESSS-SEEEEEETTSEEEEEETTBCSSC------SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECG
T ss_pred             CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCc------eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEEC
Confidence            1223333443 48999999999999999864211      11234788999999  578887 89999999999999 66


Q ss_pred             ccCceeeeecccCC--ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE
Q psy15191        165 TTWKQIQTLPCHQL--TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL  242 (312)
Q Consensus       165 ~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  242 (312)
                      ++.+....+.+|..  .|.+++|+|+++.+++++.|++|++||+++......+.+       |...|++++|+|++++|+
T Consensus       341 ~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-------H~~~V~sva~Sp~g~~l~  413 (524)
T 2j04_B          341 KDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-------RETTITAIGVSRLHPMVL  413 (524)
T ss_dssp             GGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-------CSSCEEEEECCSSCCBCE
T ss_pred             CCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-------CCCceEEEEeCCCCCeEE
Confidence            65555555555643  588999999999999999999999999998877666665       888999999999999999


Q ss_pred             EeccCCeEEEEecCCCCCCc--------------cc--cc-cc---------c------cceeEEeeccCcceeEEEecc
Q psy15191        243 TISRDGVCVVWGLGEPPTEE--------------DL--VQ-NT---------L------WPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~--------------~~--~~-~~---------~------~~~~~~~~~~~~~v~~~~~s~  290 (312)
                      +|+.||.|++||+.......              ..  .+ ..         .      ...+..+.+|...|.+++|+|
T Consensus       414 Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp  493 (524)
T 2j04_B          414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNE  493 (524)
T ss_dssp             EEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECC
T ss_pred             EEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCC
Confidence            99999999999975432111              00  00 00         0      123556778999999999999


Q ss_pred             CCC---eEEEEecCCCcccceEEeC
Q psy15191        291 DGT---LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       291 ~~~---~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++.   +||+|     +.||.|+||
T Consensus       494 ~~~~~~~lAsg-----~~~g~vrlw  513 (524)
T 2j04_B          494 TSAGGKCYAFS-----NSAGLLTLE  513 (524)
T ss_dssp             STTTTTEEEEE-----CTTSEEEEE
T ss_pred             CCCccHHHHhh-----ccCceEEEE
Confidence            964   99999     555559998

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=7.8e-36  Score=244.53  Aligned_cols=255  Identities=15%  Similarity=0.182  Sum_probs=191.5

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc-cc--------ccccc------cCCCCCceEEEEeCCC
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG-NY--------LPYHM------RDDSKQLHLLSCSMDK  109 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~-~~--------~~~~~------~~~~~~~~l~~~~~d~  109 (312)
                      +|...|.+++|+|+   ++++.+|++|+.||.|++||+.+++ ..        .+...      .+++++.+|++++.|+
T Consensus        63 ~~~~~v~~~~~~~~---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~  139 (357)
T 3i2n_A           63 EKAKPIKCGTFGAT---SLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG  139 (357)
T ss_dssp             EESSCEEEEECTTC---CTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS
T ss_pred             cccCcEEEEEEcCC---CCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC
Confidence            68899999999987   2235899999999999999998876 31        11112      3567888999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEE----ECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK----FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      .|++||+++.+.. ...... ........+.+++    |+|+++++++++.++.|++ |+++.+.... ..|...|.+++
T Consensus       140 ~i~vwd~~~~~~~-~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~  216 (357)
T 3i2n_A          140 TVKVWDPRQKDDP-VANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLE  216 (357)
T ss_dssp             CEEEECTTSCSSC-SEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEE
T ss_pred             eEEEEeCCCCCCc-ceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEE
Confidence            9999999875421 111110 0111234788888    7899999999999999999 7777776444 45889999999


Q ss_pred             ECC---CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCCCC
Q psy15191        185 FSP---DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       185 ~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      |+|   ++++|++++.||.|++||+++.+....+...  ....|...|++++|+|+++ +|++++.||.|++||+..+..
T Consensus       217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  294 (357)
T 3i2n_A          217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV--SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ  294 (357)
T ss_dssp             ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE--EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred             cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee--ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence            999   9999999999999999999875443332210  0001788899999999998 899999999999999987643


Q ss_pred             Cccccc-------ccccceeEEeeccCcceeEEEeccCCCeEE-EEecCCCcccceEEeC
Q psy15191        261 EEDLVQ-------NTLWPEVQKLYGHGYEIYSLAASHDGTLLA-SACKATKPEHAAIIIW  312 (312)
Q Consensus       261 ~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~s~d~~~~dg~i~iW  312 (312)
                      ......       ...++.+..+.+|...|++++|+|++++|+ +++     .||.|+||
T Consensus       295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~-----~d~~i~iw  349 (357)
T 3i2n_A          295 RSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS-----FDQTVRVL  349 (357)
T ss_dssp             C--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE-----TTSEEEEE
T ss_pred             cccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec-----CCCcEEEE
Confidence            211100       112236778889999999999999999998 785     45559998

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.5e-36  Score=255.43  Aligned_cols=265  Identities=13%  Similarity=0.141  Sum_probs=195.3

Q ss_pred             EEEEeccCCCceEEEEEeCCC--------------------Cc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191         16 VLYTLTNHKSKVMAVKWNGEG--------------------GK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL   73 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~w~~~~--------------------~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~   73 (312)
                      ......+|...|++++|+|..                    ++  ....+.+|.+.|++|+|+|.     ++.+|+||+.
T Consensus       111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-----~~~~l~s~s~  185 (435)
T 4e54_B          111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-----NTNQFYASSM  185 (435)
T ss_dssp             SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-----CTTEEEEECS
T ss_pred             ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-----CCCEEEEEeC
Confidence            334455677778888776633                    22  23345689999999999984     2789999999


Q ss_pred             CCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         74 DKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        74 dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      ||+|++||++++..          ..+..+.+++++.+|++|+.||.|++||++...        ...+.+|...|.+++
T Consensus       186 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~--------~~~~~~h~~~v~~v~  257 (435)
T 4e54_B          186 EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE--------LWNLRMHKKKVTHVA  257 (435)
T ss_dssp             SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB--------CCCSBCCSSCEEEEE
T ss_pred             CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce--------eEEEecccceEEeee
Confidence            99999999976543          123344556788899999999999999987522        223457889999999


Q ss_pred             ECCCCC-eEEEeecCCeEEE-ecccCceeeee---cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        144 FGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTL---PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       144 ~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      |+|+++ ++++++.|+.|++ |+++.+....+   .+|...|++++|+|++++|++++.||.|++||+++......+...
T Consensus       258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~  337 (435)
T 4e54_B          258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPH  337 (435)
T ss_dssp             ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred             ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecc
Confidence            999886 6778999999999 66555433332   378999999999999999999999999999999988776665543


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEec------------cCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTIS------------RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYS  285 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~  285 (312)
                      ......+ ..+....|+|++.++++++            .++.|++||..++.            .+..+ .+|...|.+
T Consensus       338 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~------------~~~~l~~~~~~~v~s  404 (435)
T 4e54_B          338 PHRHFQH-LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK------------MMCQLYDPESSGISS  404 (435)
T ss_dssp             CCCCCSS-SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC------------EEEEECCSSCCCCCC
T ss_pred             ccccccc-ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc------------EEEEEeCCCCCcEEE
Confidence            3221111 1123345666666555543            34579999998874            45554 468888988


Q ss_pred             E-EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        286 L-AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       286 ~-~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      + +|+|+|++|++|+ |     +.|+||
T Consensus       405 ~~~fspdg~~lasg~-d-----~~i~iW  426 (435)
T 4e54_B          405 LNEFNPMGDTLASAM-G-----YHILIW  426 (435)
T ss_dssp             EEEECTTSSCEEEEC-S-----SEEEEC
T ss_pred             EEEECCCCCEEEEEc-C-----CcEEEE
Confidence            7 6999999999883 3     449999

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=8.7e-36  Score=244.82  Aligned_cols=243  Identities=14%  Similarity=0.056  Sum_probs=180.0

Q ss_pred             EEccccCcEEEEEEecCcC---cCCCCceEEEecCCCcEEEeeecCCccc-----------------ccccccCCCCCce
Q psy15191         42 TLTNHKSKVMAVKWVLNTS---LDPEHKDLVSCSLDKTAILWKYVSEGNY-----------------LPYHMRDDSKQLH  101 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~---~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------------~~~~~~~~~~~~~  101 (312)
                      .|.+|...|.++++.++.-   .+.++..|++++.|+.+++|++......                 .+..+.++|++.+
T Consensus        68 ~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~  147 (365)
T 4h5i_A           68 ALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV  147 (365)
T ss_dssp             ECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC
T ss_pred             EccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE
Confidence            4667888898888765400   0111223344567889999998765431                 1234556888888


Q ss_pred             EEEE--eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee--eecccC
Q psy15191        102 LLSC--SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ--TLPCHQ  177 (312)
Q Consensus       102 l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~--~~~~~~  177 (312)
                      ++++  +.|++|++||+.+.+.  +...      .|...|.+++|+|+|+++++++.++.+.++..+.....  ....|.
T Consensus       148 la~as~~~d~~i~iwd~~~~~~--~~~~------~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~  219 (365)
T 4h5i_A          148 AAIASSKVPAIMRIIDPSDLTE--KFEI------ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKN  219 (365)
T ss_dssp             EEEEESCSSCEEEEEETTTTEE--EEEE------ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTT
T ss_pred             EEEEECCCCCEEEEeECCCCcE--EEEe------CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCC
Confidence            7654  4789999999998443  2222      25567999999999999999998877777555554433  234688


Q ss_pred             CceeEEEECCCCCEEEEEecCC----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDR----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ..|.+++|+|+++++++++.|+    .+++|++............   ...|...|++++|+|+|++||+|+.|+.|+||
T Consensus       220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw  296 (365)
T 4h5i_A          220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ---VTNRFKGITSMDVDMKGELAVLASNDNSIALV  296 (365)
T ss_dssp             EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE---EESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred             CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee---ecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence            8999999999999999999887    6888998765432211110   01177889999999999999999999999999


Q ss_pred             ecCCCCCCcccccccccceeEE-eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQK-LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+.++.            ++.. +.+|...|++++|||||++||+||.|++     |+||
T Consensus       297 d~~~~~------------~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t-----vrvw  339 (365)
T 4h5i_A          297 KLKDLS------------MSKIFKQAHSFAITEVTISPDSTYVASVSAANT-----IHII  339 (365)
T ss_dssp             ETTTTE------------EEEEETTSSSSCEEEEEECTTSCEEEEEETTSE-----EEEE
T ss_pred             ECCCCc------------EEEEecCcccCCEEEEEECCCCCEEEEEeCCCe-----EEEE
Confidence            998863            5665 4789999999999999999999965555     9998

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=8.9e-35  Score=246.73  Aligned_cols=266  Identities=20%  Similarity=0.246  Sum_probs=217.4

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEE------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVK------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL   68 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l   68 (312)
                      ++|+..+++.+..+.+|.+.|.+++                  |+.++++.+..+.+|...|.+++|++.    +++.+|
T Consensus       145 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~----~~~~~l  220 (464)
T 3v7d_B          145 RVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEY----KNIKYI  220 (464)
T ss_dssp             EEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEES----SSCEEE
T ss_pred             EEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecC----CCCCEE
Confidence            6899999999999999999999998                  555567888999999999999999975    458899


Q ss_pred             EEecCCCcEEEeeecCCccccc-----------------------------ccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191         69 VSCSLDKTAILWKYVSEGNYLP-----------------------------YHMRDDSKQLHLLSCSMDKSIIVWAPDPT  119 (312)
Q Consensus        69 ~s~~~dg~i~vw~~~~~~~~~~-----------------------------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  119 (312)
                      ++|+.||.|++||+.+......                             ......+++.++++++.|+.|++||+.+.
T Consensus       221 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~  300 (464)
T 3v7d_B          221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM  300 (464)
T ss_dssp             EEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred             EEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            9999999999999987653210                             00011345678999999999999999874


Q ss_pred             cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                      +  .+..     +.+|...|.+++|+|+++++++++.||.|++ |+++.+....+.+|...|.+++|+  +++|++++.|
T Consensus       301 ~--~~~~-----~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d  371 (464)
T 3v7d_B          301 K--CLYI-----LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD  371 (464)
T ss_dssp             E--EEEE-----ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred             c--EEEE-----ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence            3  2222     2478889999999999999999999999999 888888888999999999999997  5799999999


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE-ee
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK-LY  277 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~  277 (312)
                      |.|++||+++........        +...+..++|+|++++|++++ ||.|++||+.++.            .+.. +.
T Consensus       372 g~v~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~------------~~~~~~~  430 (464)
T 3v7d_B          372 GSIRGWDANDYSRKFSYH--------HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK------------LVHANIL  430 (464)
T ss_dssp             SEEEEEETTTCCEEEEEE--------CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC------------EEESCTT
T ss_pred             CcEEEEECCCCceeeeec--------CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc------------EEehhhc
Confidence            999999999877665554        555677889999999999998 8999999998874            4443 56


Q ss_pred             ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        278 GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       278 ~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|...|.+++|+ ...+++++     +.||.+.+|
T Consensus       431 ~~~~~v~~v~~~-~~~l~~~~-----~~~g~~~i~  459 (464)
T 3v7d_B          431 KDADQIWSVNFK-GKTLVAAV-----EKDGQSFLE  459 (464)
T ss_dssp             TTCSEEEEEEEE-TTEEEEEE-----EETTEEEEE
T ss_pred             cCCCcEEEEEec-CCEEEEEE-----EeCCeEEEE
Confidence            788999999997 33455555     334446654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.4e-35  Score=241.88  Aligned_cols=256  Identities=19%  Similarity=0.249  Sum_probs=196.4

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCC--CCceEEEEe
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDS--KQLHLLSCS  106 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~--~~~~l~~~~  106 (312)
                      ..+.+|.+.|++++|+|+      +++|++|+.||.|++||+.++..            ..+..+.+.+  ++.+|++++
T Consensus         5 ~~~~gH~~~v~~~~~~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~   78 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFY------GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS   78 (351)
T ss_dssp             CEECCCSSCEEEEEECSS------SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred             ccCcccccceeEEEEcCC------CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc
Confidence            456899999999999999      89999999999999999987532            1344445556  478999999


Q ss_pred             CCCcEEEEcCCCCcceee--eeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCceeeeec-------
Q psy15191        107 MDKSIIVWAPDPTTGLWL--ETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWKQIQTLP-------  174 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~~~~~~~-------  174 (312)
                      .|+.|++||+++.+....  .......+..|...|.+++|+|+  ++++++++.|+.|++ |+++.+....+.       
T Consensus        79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  158 (351)
T 3f3f_A           79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV  158 (351)
T ss_dssp             TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred             CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence            999999999987532110  00112233478899999999999  999999999999999 666554433322       


Q ss_pred             ------ccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC----ceE
Q psy15191        175 ------CHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS----RYF  241 (312)
Q Consensus       175 ------~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l  241 (312)
                            .|...+.+++|+|+   +.++++++.|+.+.+|+.............     .|...|++++|+|++    ++|
T Consensus       159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~i~~~~~~p~~~~~~~~l  233 (351)
T 3f3f_A          159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-----GHKSLIRSISWAPSIGRWYQLI  233 (351)
T ss_dssp             CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-----CCCSCEEEEEECCCSSCSSEEE
T ss_pred             cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-----CCCcceeEEEECCCCCCcceEE
Confidence                  57888999999997   999999999999988887766542222211     178899999999998    899


Q ss_pred             EEeccCCeEEEEecCCCCCCcccc----------------------------------cccccceeEEeeccCcceeEEE
Q psy15191        242 LTISRDGVCVVWGLGEPPTEEDLV----------------------------------QNTLWPEVQKLYGHGYEIYSLA  287 (312)
Q Consensus       242 ~s~~~dg~i~iwd~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~v~~~~  287 (312)
                      ++++.||.|++||+..+.......                                  .....+.+..+.+|...|++++
T Consensus       234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  313 (351)
T 3f3f_A          234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS  313 (351)
T ss_dssp             EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred             EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence            999999999999998652211100                                  0111246777889999999999


Q ss_pred             eccCCCeEEEEecCCCcccceEEeC
Q psy15191        288 ASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       288 ~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+|++++|++++.|+.     |+||
T Consensus       314 ~s~~~~~l~s~~~dg~-----v~iw  333 (351)
T 3f3f_A          314 WNLTGTILSSAGDDGK-----VRLW  333 (351)
T ss_dssp             ECSSSCCEEEEETTSC-----EEEE
T ss_pred             EcCCCCEEEEecCCCc-----EEEE
Confidence            9999999999965555     9998

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=3e-35  Score=245.25  Aligned_cols=262  Identities=16%  Similarity=0.158  Sum_probs=207.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCccc---------------------c
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------------------L   89 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------------------~   89 (312)
                      |+.+.++....+.+|.+.|++++|+| +      +++|++|+.||.|++||+.++...                     .
T Consensus        28 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (408)
T 4a11_B           28 LGLELNKDRDVERIHGGGINTLDIEPVE------GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS  101 (408)
T ss_dssp             HTEEECTTEEECCCCSSCEEEEEECTTT------CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred             eccccCcceeeeeccCCcEEEEEEecCC------CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence            66667778889999999999999999 7      899999999999999999876542                     2


Q ss_pred             cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC---CCeEEEeecCCeEEE-ec
Q psy15191         90 PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR---GDYIIAHGFQGSLHL-DV  164 (312)
Q Consensus        90 ~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-d~  164 (312)
                      +..+.+.+ ++.++++++.|+.|++||+.+.+..  ...      .+...+.++.++|.   +.++++++.++.+++ |+
T Consensus       102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~  173 (408)
T 4a11_B          102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA--DVF------NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL  173 (408)
T ss_dssp             EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE--EEE------ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred             EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc--eec------cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence            33344455 6678999999999999999984432  222      24566889999884   458999999999999 88


Q ss_pred             ccCceeeeecccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCCC-eEEEEeccC--------CCCcccceeeEEEEE
Q psy15191        165 TTWKQIQTLPCHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSG-RLSLVACSD--------KTNGVHKRIIWGVAW  234 (312)
Q Consensus       165 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~--------~~~~~~~~~v~~~~~  234 (312)
                      ++.+....+..|...|.+++|+|++. .|++++.||.|++||++... ....+....        .....|...|.+++|
T Consensus       174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  253 (408)
T 4a11_B          174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF  253 (408)
T ss_dssp             SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred             CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence            88888888889999999999999998 58899999999999998765 333321110        111227889999999


Q ss_pred             cCCCceEEEeccCCeEEEEecCCCCCCccccc-----------------------------------ccccceeEEeecc
Q psy15191        235 SHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ-----------------------------------NTLWPEVQKLYGH  279 (312)
Q Consensus       235 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~  279 (312)
                      +|++++|++++.||.|++||+..+........                                   ....+++..+.+|
T Consensus       254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~  333 (408)
T 4a11_B          254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH  333 (408)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred             cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence            99999999999999999999987643221100                                   0122467778889


Q ss_pred             CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        280 GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       280 ~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...|++++|+|++++|++++.|+.     |++|
T Consensus       334 ~~~v~~~~~s~~~~~l~s~~~dg~-----i~iw  361 (408)
T 4a11_B          334 YKTVDCCVFQSNFQELYSGSRDCN-----ILAW  361 (408)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSC-----EEEE
T ss_pred             CCeEEEEEEcCCCCEEEEECCCCe-----EEEE
Confidence            999999999999999999955555     9998

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.4e-37  Score=252.69  Aligned_cols=238  Identities=11%  Similarity=0.086  Sum_probs=182.7

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC--cc--------cccccccCCCCCceEEEEeCCCcE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE--GN--------YLPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~--~~--------~~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      .+..|.++|++++|+|+      +++|++|+.|+.|++||+.++  +.        ..+..+.+++++.+|++++.|+.|
T Consensus         6 ~~~~~~~~v~~~~~s~~------g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v   79 (377)
T 3dwl_C            6 VLHILPKPSYEHAFNSQ------RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNA   79 (377)
T ss_dssp             EEEECSSCCSCCEECSS------SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSE
T ss_pred             eEecCCCcEEEEEECCC------CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeE
Confidence            34456789999999999      999999999999999999987  33        234455667888899999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc---eeeeecc-cCCceeEEEEC
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK---QIQTLPC-HQLTITQLAFS  186 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~---~~~~~~~-~~~~v~~~~~~  186 (312)
                      ++||+.+.+.    ......+..|...|.+++|+|++++|++++.|+.|++ |+++.+   ....+.. |...|.+++|+
T Consensus        80 ~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~  155 (377)
T 3dwl_C           80 YVYEKRPDGT----WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH  155 (377)
T ss_dssp             EEC------C----CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC
T ss_pred             EEEEcCCCCc----eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc
Confidence            9999987540    0112223468889999999999999999999999999 554443   3455556 99999999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCe--------------EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGR--------------LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV  252 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i  252 (312)
                      |++++|++++.|+.|++||++....              ........    .|...|++++|+|++++|++++.||.|++
T Consensus       156 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~i  231 (377)
T 3dwl_C          156 PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNALAYAGHDSSVTI  231 (377)
T ss_dssp             TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCEEEEETTTEEC-
T ss_pred             CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEEEEEeCCCcEEE
Confidence            9999999999999999999964321              11111110    28888999999999999999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      ||+..+....        ..+..+.+|...|.+++|+|++++|++++.+
T Consensus       232 wd~~~~~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~  272 (377)
T 3dwl_C          232 AYPSAPEQPP--------RALITVKLSQLPLRSLLWANESAIVAAGYNY  272 (377)
T ss_dssp             CEECSTTSCE--------EECCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred             EECCCCCCcc--------eeeEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence            9998874311        1266788899999999999999999999433

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2.2e-34  Score=243.09  Aligned_cols=266  Identities=25%  Similarity=0.372  Sum_probs=222.3

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV   69 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~   69 (312)
                      ++|+..+++.+..+.+|...|.++.                 |+..+++.+..+.+|...|.++.|++.        .++
T Consensus       142 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--------~l~  213 (445)
T 2ovr_B          142 KVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--------RVV  213 (445)
T ss_dssp             EEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT--------EEE
T ss_pred             EEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCC--------EEE
Confidence            5899999999999999999999887                 777788999999999999999999644        799


Q ss_pred             EecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         70 SCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      +|+.||.|++||+.+++...        +....+  ++..+++++.|+.|++||+++.+  ....     +.+|...+.+
T Consensus       214 s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~--~~~~-----~~~~~~~v~~  284 (445)
T 2ovr_B          214 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET--CLHT-----LQGHTNRVYS  284 (445)
T ss_dssp             EEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE--EEEE-----ECCCSSCEEE
T ss_pred             EEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc--EeEE-----ecCCCCceEE
Confidence            99999999999998876532        222222  56689999999999999998743  2222     2378889999


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      ++|  ++.++++++.|+.|++ |+++.+....+.+|...+.++.+  +++++++++.||.|++||+++.+.+..+.....
T Consensus       285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  360 (445)
T 2ovr_B          285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK  360 (445)
T ss_dssp             EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTS
T ss_pred             EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCC
Confidence            999  7899999999999999 99888888888899999998887  467999999999999999999888877765332


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-----eccCcceeEEEeccCCCeE
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-----YGHGYEIYSLAASHDGTLL  295 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l  295 (312)
                          |...|++++|+  +++|++|+.||.|++||+.++.            .+..+     .+|.+.|.+++|+|++.+|
T Consensus       361 ----~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  422 (445)
T 2ovr_B          361 ----HQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE------------FIRNLVTLESGGSGGVVWRIRASNTKLVC  422 (445)
T ss_dssp             ----CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC------------EEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred             ----CCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc------------eeeeeeccccCCCCceEEEEEecCCEEEE
Confidence                67789999995  6899999999999999998874            44555     4688999999999999999


Q ss_pred             EEEecCCCcccceEEeC
Q psy15191        296 ASACKATKPEHAAIIIW  312 (312)
Q Consensus       296 ~s~s~d~~~~dg~i~iW  312 (312)
                      ++|+.|+. ++..|.||
T Consensus       423 a~~~~dg~-~~~~l~v~  438 (445)
T 2ovr_B          423 AVGSRNGT-EETKLLVL  438 (445)
T ss_dssp             EEECSSSS-SCCEEEEE
T ss_pred             EEcccCCC-CccEEEEE
Confidence            99966663 34447776

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.2e-35  Score=235.08  Aligned_cols=244  Identities=20%  Similarity=0.303  Sum_probs=197.7

Q ss_pred             EeCCCCceEEEEc--cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc------ccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLT--NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH------MRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~------~~~~~~~~~l~  103 (312)
                      ||.++++++..+.  +|...|++++|+|+      +++|++|+.||+|++||+++++......      ......+..++
T Consensus        50 Wd~~tg~~~~~~~~~~~~~~V~~v~~~~~------~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~  123 (318)
T 4ggc_A           50 WSASSGDILQLLQMEQPGEYISSVAWIKE------GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS  123 (318)
T ss_dssp             EETTTCCEEEEEECCSTTCCEEEEEECTT------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEE
T ss_pred             EECCCCCEEEEEEecCCCCeEEEEEECCC------CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEE
Confidence            9999999888775  67788999999999      9999999999999999999887632211      12234556899


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce----eeeecccCC
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ----IQTLPCHQL  178 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~----~~~~~~~~~  178 (312)
                      +++.++.+++|+.......      ...+.+|...+..+.++++++++++++.|+.|++ |+++.+.    ......+.+
T Consensus       124 s~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  197 (318)
T 4ggc_A          124 SGSRSGHIHHHDVRVAEHH------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG  197 (318)
T ss_dssp             EEETTSEEEEEETTSSSCE------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS
T ss_pred             EEecCCceEeeecCCCcee------EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC
Confidence            9999999999998864322      1222478889999999999999999999999999 6555432    223346788


Q ss_pred             ceeEEEECCCCCEE---EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe--ccCCeEEEE
Q psy15191        179 TITQLAFSPDDTHL---VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI--SRDGVCVVW  253 (312)
Q Consensus       179 ~v~~~~~~~~~~~l---~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~iw  253 (312)
                      .|..+.++|++..+   ++++.++.|++||.+.........        +...+..+.|+|++..++++  +.|+.|++|
T Consensus       198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iw  269 (318)
T 4ggc_A          198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AHSQVCSILWSPHYKELISGHGFAQNQLVIW  269 (318)
T ss_dssp             CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--------CSSCEEEEEEETTTTEEEEEECTTTCCEEEE
T ss_pred             ceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--------ceeeeeeeeecccccceEEEEEcCCCEEEEE
Confidence            99999999976543   456788999999999877766555        66678999999999988765  479999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+.++.            ++..+.+|.+.|++++|+|+|++|+|||.|     |+|+||
T Consensus       270 d~~~~~------------~~~~l~gH~~~V~~l~~spdg~~l~S~s~D-----~~v~iW  311 (318)
T 4ggc_A          270 KYPTMA------------KVAELKGHTSRVLSLTMSPDGATVASAAAD-----ETLRLW  311 (318)
T ss_dssp             ETTTCC------------EEEEECCCSSCEEEEEECTTSSCEEEEETT-----TEEEEE
T ss_pred             ECCCCc------------EEEEEcCCCCCEEEEEEcCCCCEEEEEecC-----CeEEEE
Confidence            998763            788899999999999999999999999555     459999

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=3.3e-35  Score=242.21  Aligned_cols=234  Identities=10%  Similarity=0.107  Sum_probs=192.9

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCCCCceEEEEeCCCcEE
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDSKQLHLLSCSMDKSII  112 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~~~~~l~~~~~d~~i~  112 (312)
                      +..|.++|++++|+|+      +++|++++.|+.|++||+.+++  .        ..+..+.+++++.++++++.|+.|+
T Consensus         4 ~~~~~~~i~~~~~s~~------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~   77 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKD------RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY   77 (372)
T ss_dssp             EESCSSCCCEEEECTT------SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred             ecccCCCeEEEEECCC------CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEE
Confidence            4568999999999999      9999999999999999998875  2        1344455567888999999999999


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce---e-eeecccCCceeEEEECC
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ---I-QTLPCHQLTITQLAFSP  187 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~---~-~~~~~~~~~v~~~~~~~  187 (312)
                      +||+.+.+.....     ....|...+.+++|+|++++|++++.++.+++ |+...+.   . .....|...|.+++|+|
T Consensus        78 vwd~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~  152 (372)
T 1k8k_C           78 VWTLKGRTWKPTL-----VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP  152 (372)
T ss_dssp             EEEEETTEEEEEE-----ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred             EEECCCCeeeeeE-----EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence            9999774422221     22367888999999999999999999999999 5554441   2 22346889999999999


Q ss_pred             CCCEEEEEecCCeEEEEEcc------------------CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQ------------------SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV  249 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~  249 (312)
                      ++++|++++.|+.|++||++                  ..+....+..       |...|.+++|+|++++|++++.||.
T Consensus       153 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~  225 (372)
T 1k8k_C          153 NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-------SCGWVHGVCFSANGSRVAWVSHDST  225 (372)
T ss_dssp             TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-------CSSCEEEEEECSSSSEEEEEETTTE
T ss_pred             CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-------CCCeEEEEEECCCCCEEEEEeCCCE
Confidence            99999999999999999964                  3444444432       7888999999999999999999999


Q ss_pred             EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       250 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++||+..+.            ++..+..|..+|.+++|+|++++|+++ .|+.     |++|
T Consensus       226 i~i~d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-----i~i~  270 (372)
T 1k8k_C          226 VCLADADKKM------------AVATLASETLPLLAVTFITESSLVAAG-HDCF-----PVLF  270 (372)
T ss_dssp             EEEEEGGGTT------------EEEEEECSSCCEEEEEEEETTEEEEEE-TTSS-----CEEE
T ss_pred             EEEEECCCCc------------eeEEEccCCCCeEEEEEecCCCEEEEE-eCCe-----EEEE
Confidence            9999998763            678888999999999999999988877 6665     8887

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=6.8e-35  Score=244.31  Aligned_cols=258  Identities=16%  Similarity=0.169  Sum_probs=201.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |+..+++....+.+|...|++++|+|+      +++|++|+.|+.|++||+.+++..        .+..+.+++++.+|+
T Consensus       124 wd~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  197 (420)
T 3vl1_A          124 LDSNFNLQREIDQAHVSEITKLKFFPS------GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL  197 (420)
T ss_dssp             ECTTSCEEEEETTSSSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred             EeCCCcceeeecccccCccEEEEECCC------CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence            888889998888999999999999999      899999999999999999887652        334455677888999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecc-------------------cCCCccceeEEEECCCCCeEEEeecCCeEEE-e
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGE-------------------VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-D  163 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d  163 (312)
                      +++.|+.|++||+++.+..  .......                   ...+...+.+++|+|+++++++++.||.|++ |
T Consensus       198 s~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d  275 (420)
T 3vl1_A          198 SASLDGTIRLWECGTGTTI--HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN  275 (420)
T ss_dssp             EEETTSCEEEEETTTTEEE--EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred             EEcCCCcEEEeECCCCcee--EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence            9999999999999985432  2222100                   0012345666777899999999999999999 7


Q ss_pred             cccCceeeeec-ccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCce
Q psy15191        164 VTTWKQIQTLP-CHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       164 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  240 (312)
                      +++.+....+. .|...|.+++|+|++. +|++++.||.|++||+++.+. +..+...      +...|.++.+ |++++
T Consensus       276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~------~~~~v~~~~~-~~~~~  348 (420)
T 3vl1_A          276 VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN------EGTPINNVYF-AAGAL  348 (420)
T ss_dssp             TTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES------TTSCEEEEEE-ETTEE
T ss_pred             CCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc------CCCCceEEEe-CCCCE
Confidence            77777666554 5788999999999998 999999999999999998654 4555443      5667888855 57889


Q ss_pred             EEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC---eEEEEecCCCcccceEEeC
Q psy15191        241 FLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT---LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       241 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++++.||.|++|++..+........   ......+.+|...|.+++|+|+++   .|++.+.     +|.+.+|
T Consensus       349 l~s~~~d~~v~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~-----~g~~~~~  415 (420)
T 3vl1_A          349 FVSSGFDTSIKLDIISDPESERPAIE---FETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK-----NNFCALY  415 (420)
T ss_dssp             EEEETTTEEEEEEEECCTTCCSCEEC---TTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET-----TTEEEEE
T ss_pred             EEEecCCccEEEEeccCCCCCcccee---ccCccEEccCCcceEEEEEccCCCCcceEEEEcC-----CceEEEE
Confidence            99999999999999987543322111   113344668899999999999999   6777744     4458887

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=3.4e-35  Score=243.26  Aligned_cols=249  Identities=14%  Similarity=0.190  Sum_probs=191.8

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCC-ceEEEecCCCcEEEeeecCCccc----------ccccccCCC-CC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEH-KDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDS-KQ   99 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~-~~   99 (312)
                      ++....+....+.+|...|++++|+|+      + ++|++|+.||.|++||+.+++..          .+..+.+++ ++
T Consensus        58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  131 (383)
T 3ei3_B           58 RSLKSYKLHRTASPFDRRVTSLEWHPT------HPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT  131 (383)
T ss_dssp             HHHTTCEEEEEECCCSSCEEEEEECSS------CTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred             ccccccceEEeccCCCCCEEEEEECCC------CCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC
Confidence            344567788999999999999999999      7 89999999999999999876552          233444566 66


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCC
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL  178 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~  178 (312)
                      .++++++.|+.|++||+.....   ...  .....+...+.+++|+|++++|++++.|+.|++ |+ +.+....+..|..
T Consensus       132 ~~l~s~~~d~~i~iwd~~~~~~---~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~  205 (383)
T 3ei3_B          132 NQLFVSSIRGATTLRDFSGSVI---QVF--AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA  205 (383)
T ss_dssp             EEEEEEETTTEEEEEETTSCEE---EEE--ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS
T ss_pred             CEEEEEeCCCEEEEEECCCCce---EEE--eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC
Confidence            7999999999999999985221   111  122345678999999999999999999999999 66 3556667778999


Q ss_pred             ceeEEEECCCCC-EEEEEecCCeEEEEEccC----CCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEE
Q psy15191        179 TITQLAFSPDDT-HLVSVSRDRRWGLYKRQS----SGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVV  252 (312)
Q Consensus       179 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i  252 (312)
                      .|.+++|+|+++ +|++++.|+.|++||+++    ......+.        |...|++++|+| ++++|++++.|+.|++
T Consensus       206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~~l~~~~~d~~i~i  277 (383)
T 3ei3_B          206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--------HEKPVNAAYFNPTDSTKLLTTDQRNEIRV  277 (383)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--------CSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred             cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec--------CCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence            999999999999 999999999999999997    44444442        788899999999 9999999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEeeccC----------cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHG----------YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ||+.+......+...     ......|.          ..+..++|+|++++  ++     +.||.|++|
T Consensus       278 wd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~-----s~d~~i~iw  335 (383)
T 3ei3_B          278 YSSYDWSKPDQIIIH-----PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LL-----NDKRTIDIY  335 (383)
T ss_dssp             EETTBTTSCSEEEEC-----CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CT-----TCCCCEEEE
T ss_pred             EECCCCccccccccc-----cccccccccceEEeccCCCCceEEEecCCccc--cc-----CCCCeEEEE
Confidence            999877543221100     00011122          33445667777766  66     455669998

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.7e-34  Score=243.75  Aligned_cols=261  Identities=18%  Similarity=0.231  Sum_probs=209.3

Q ss_pred             eEEEEeccCCCce-EEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191         15 KVLYTLTNHKSKV-MAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT   76 (312)
Q Consensus        15 ~~~~~~~~h~~~v-~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~   76 (312)
                      ....++.+|...| .++.                 |+..+++.+..+.+|.+.|++++|+|+      + +|++|+.||+
T Consensus       112 ~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~------~-~l~s~s~dg~  184 (464)
T 3v7d_B          112 PQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG------G-ILVSGSTDRT  184 (464)
T ss_dssp             CEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST------T-EEEEEETTSC
T ss_pred             cceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC------C-EEEEEeCCCC
Confidence            3556677777664 4443                 888899999999999999999999988      5 8999999999


Q ss_pred             EEEeeecCCcccc--------cccccC--CCCCceEEEEeCCCcEEEEcCCCCcceeeeee----------------eec
Q psy15191         77 AILWKYVSEGNYL--------PYHMRD--DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA----------------RVG  130 (312)
Q Consensus        77 i~vw~~~~~~~~~--------~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------------~~~  130 (312)
                      |++||+.+++...        +....+  .+++.++++++.|+.|++||+.+.........                ...
T Consensus       185 i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (464)
T 3v7d_B          185 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG  264 (464)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred             EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence            9999998876521        112222  25667999999999999999987543221100                022


Q ss_pred             ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191        131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~  209 (312)
                      ...+|...+.++  +++++++++++.|+.|++ |+++.+....+.+|...|.+++|+|+++++++++.||.|++||+++.
T Consensus       265 ~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~  342 (464)
T 3v7d_B          265 VLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG  342 (464)
T ss_dssp             EECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred             EccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence            334677777665  678999999999999999 88888888888899999999999999999999999999999999988


Q ss_pred             CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191        210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS  289 (312)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  289 (312)
                      +.+..+..       |...|.+++|+  +++|++++.||.|++||+.+..            .... ..|...+..++|+
T Consensus       343 ~~~~~~~~-------h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~------------~~~~-~~~~~~~~~~~~~  400 (464)
T 3v7d_B          343 ELMYTLQG-------HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS------------RKFS-YHHTNLSAITTFY  400 (464)
T ss_dssp             EEEEEECC-------CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC------------EEEE-EECTTCCCEEEEE
T ss_pred             cEEEEEeC-------CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc------------eeee-ecCCCCccEEEEE
Confidence            88777765       88889999997  5899999999999999998763            2222 2366778889999


Q ss_pred             cCCCeEEEEecCCCcccceEEeC
Q psy15191        290 HDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       290 ~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++++|++++ |     |.|++|
T Consensus       401 ~~~~~l~~~~-d-----g~i~iw  417 (464)
T 3v7d_B          401 VSDNILVSGS-E-----NQFNIY  417 (464)
T ss_dssp             ECSSEEEEEE-T-----TEEEEE
T ss_pred             eCCCEEEEec-C-----CeEEEE
Confidence            9999999995 4     449998

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.9e-35  Score=244.27  Aligned_cols=223  Identities=14%  Similarity=0.164  Sum_probs=167.1

Q ss_pred             CCCeEEEEeccCCCceEEEEEeCCCC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc---
Q psy15191         12 EGGKVLYTLTNHKSKVMAVKWNGEGG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG---   86 (312)
Q Consensus        12 ~~~~~~~~~~~h~~~v~~~~w~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~---   86 (312)
                      .+++.+.+-. ..+.|  ..|+..++  +.+..+.+|...|++++|+|+      +++|++++.|++|++||+.++.   
T Consensus        21 ~~g~~l~~~~-~d~~i--~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~------~~~l~s~s~d~~v~vwd~~~~~~~~   91 (377)
T 3dwl_C           21 SQRTEFVTTT-ATNQV--ELYEQDGNGWKHARTFSDHDKIVTCVDWAPK------SNRIVTCSQDRNAYVYEKRPDGTWK   91 (377)
T ss_dssp             SSSSEEECCC-SSSCB--CEEEEETTEEEECCCBCCCSSCEEEEEECTT------TCCEEEEETTSSEEEC------CCC
T ss_pred             CCCCEEEEec-CCCEE--EEEEccCCceEEEEEEecCCceEEEEEEeCC------CCEEEEEeCCCeEEEEEcCCCCcee
Confidence            3566555442 22222  12777777  788889999999999999999      8999999999999999998876   


Q ss_pred             c--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC-CccceeEEEECCCCCeEEEeecC
Q psy15191         87 N--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG-NTLGFYGCKFGPRGDYIIAHGFQ  157 (312)
Q Consensus        87 ~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~  157 (312)
                      .        ..+..+.+++++.+|++++.|+.|++||+++.+.....    ..+.. |...|.+++|+|++++|++++.|
T Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~~~~~d  167 (377)
T 3dwl_C           92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS----KHLKRPLRSTILSLDWHPNNVLLAAGCAD  167 (377)
T ss_dssp             CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC----EEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred             eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee----eEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence            1        23455666788889999999999999999875421111    11224 88899999999999999999999


Q ss_pred             CeEEE-ecc------------------cCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe----EEE
Q psy15191        158 GSLHL-DVT------------------TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR----LSL  214 (312)
Q Consensus       158 ~~i~~-d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~  214 (312)
                      +.+++ |++                  ..+....+ .|...|.+++|+|++++|++++.|+.|++||+++.+.    +..
T Consensus       168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  246 (377)
T 3dwl_C          168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT  246 (377)
T ss_dssp             SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred             CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence            99999 553                  22333444 7999999999999999999999999999999998876    444


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      +..       |...|.+++|+|++++|++++.++.+ +|+..
T Consensus       247 ~~~-------~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          247 VKL-------SQLPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             EEC-------SSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             ecC-------CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence            443       78889999999999999999877765 67665

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=9.7e-35  Score=258.05  Aligned_cols=233  Identities=24%  Similarity=0.302  Sum_probs=191.5

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEEE
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLS  104 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~  104 (312)
                      +....+++|.+.|++++|+|+     ++.+|+||+.|++|++|++.....             ..+..+.+++++.+|++
T Consensus       373 ~~~~~l~~H~~~V~~v~~~~~-----~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s  447 (694)
T 3dm0_A          373 VLKGTMRAHTDMVTAIATPID-----NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALS  447 (694)
T ss_dssp             EEEEEEECCSSCEEEEECCTT-----CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             chhhhcccCCceeEEEEecCC-----CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEE
Confidence            445678999999999999986     247899999999999999876432             13445566788899999


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeee--------eccc
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQT--------LPCH  176 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~--------~~~~  176 (312)
                      ++.|+.|++||+.+..  .....     .+|...|.+++|+|++++|++++.|+.|++    |+....        ..+|
T Consensus       448 gs~Dg~v~vwd~~~~~--~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i----wd~~~~~~~~~~~~~~~h  516 (694)
T 3dm0_A          448 GSWDGELRLWDLAAGV--STRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKL----WNTLGECKYTISEGGEGH  516 (694)
T ss_dssp             EETTSEEEEEETTTTE--EEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEE----ECTTSCEEEEECSSTTSC
T ss_pred             EeCCCcEEEEECCCCc--ceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEE----EECCCCcceeeccCCCCC
Confidence            9999999999998743  22332     378999999999999999999999999999    553211        1368


Q ss_pred             CCceeEEEECCCC--CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        177 QLTITQLAFSPDD--THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       177 ~~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      ...|.+++|+|++  ..|++++.|+.|++||+++.+....+..       |...|++++|+|++++|++++.||.|++||
T Consensus       517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-------h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd  589 (694)
T 3dm0_A          517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-------HTGYVSTVAVSPDGSLCASGGKDGVVLLWD  589 (694)
T ss_dssp             SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSBCEEEE
T ss_pred             CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-------CCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            8899999999986  5899999999999999998887776665       888999999999999999999999999999


Q ss_pred             cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.++.            .+..+. +...|.+++|+|++.+|++++ +     +.|+||
T Consensus       590 ~~~~~------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~-----~~i~iw  628 (694)
T 3dm0_A          590 LAEGK------------KLYSLE-ANSVIHALCFSPNRYWLCAAT-E-----HGIKIW  628 (694)
T ss_dssp             TTTTE------------EEECCB-CSSCEEEEEECSSSSEEEEEE-T-----TEEEEE
T ss_pred             CCCCc------------eEEEec-CCCcEEEEEEcCCCcEEEEEc-C-----CCEEEE
Confidence            98763            344443 456799999999998887763 2     338888

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-35  Score=245.26  Aligned_cols=251  Identities=14%  Similarity=0.227  Sum_probs=202.7

Q ss_pred             EeCCCCc---eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----Ccc--------cccccccCC
Q psy15191         32 WNGEGGK---VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----EGN--------YLPYHMRDD   96 (312)
Q Consensus        32 w~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----~~~--------~~~~~~~~~   96 (312)
                      |+..+++   ++..+ .|...|++++|+|+      +++|++++.||.|++||+..    ...        ..+..+.++
T Consensus        50 w~~~~~~~~~~~~~~-~~~~~v~~~~~s~~------~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~  122 (416)
T 2pm9_A           50 WSLLAADSEKPIASL-QVDSKFNDLDWSHN------NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFN  122 (416)
T ss_dssp             EESSSGGGCSCSCCC-CCSSCEEEEEECSS------SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred             EEccCCCCCcEEEEE-ecCCceEEEEECCC------CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEc
Confidence            8887765   44444 58899999999999      89999999999999999987    212        234445566


Q ss_pred             CC-CceEEEEeCCCcEEEEcCCCCcceee--eeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceee
Q psy15191         97 SK-QLHLLSCSMDKSIIVWAPDPTTGLWL--ETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQ  171 (312)
Q Consensus        97 ~~-~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~  171 (312)
                      ++ +.++++++.|+.|++||+.+.+....  ..........|...+.+++|+|+ +.++++++.|+.|++ |+++.+...
T Consensus       123 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~  202 (416)
T 2pm9_A          123 AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI  202 (416)
T ss_dssp             SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence            76 78999999999999999987541100  01111233468889999999999 789999999999999 888877777


Q ss_pred             eeccc------CCceeEEEECCCC-CEEEEEecCC---eEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcC-CCc
Q psy15191        172 TLPCH------QLTITQLAFSPDD-THLVSVSRDR---RWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSH-DSR  239 (312)
Q Consensus       172 ~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~  239 (312)
                      .+..+      ...|.+++|+|++ .++++++.|+   .|++||+++.. ....+..      .|...|.+++|+| +++
T Consensus       203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~  276 (416)
T 2pm9_A          203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ------GHQKGILSLDWCHQDEH  276 (416)
T ss_dssp             EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS------CCSSCEEEEEECSSCSS
T ss_pred             EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec------CccCceeEEEeCCCCCC
Confidence            77655      7899999999997 6899999998   99999999753 3333320      1788899999999 999


Q ss_pred             eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191        240 YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       240 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|++++.||.|++||+.++.            ++..+.+|...|.+++|+|++ .+|++++     .||.|++|
T Consensus       277 ~l~s~~~dg~v~~wd~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-----~d~~i~iw  333 (416)
T 2pm9_A          277 LLLSSGRDNTVLLWNPESAE------------QLSQFPARGNWCFKTKFAPEAPDLFACAS-----FDNKIEVQ  333 (416)
T ss_dssp             CEEEEESSSEEEEECSSSCC------------EEEEEECSSSCCCCEEECTTCTTEEEECC-----SSSEEEEE
T ss_pred             eEEEEeCCCCEEEeeCCCCc------------cceeecCCCCceEEEEECCCCCCEEEEEe-----cCCcEEEE
Confidence            99999999999999998763            678888999999999999999 8999995     45559998

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-35  Score=247.73  Aligned_cols=262  Identities=11%  Similarity=0.111  Sum_probs=199.0

Q ss_pred             EeCCCCceEEEE-ccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecC---Ccc----------cccccccCC
Q psy15191         32 WNGEGGKVLYTL-TNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVS---EGN----------YLPYHMRDD   96 (312)
Q Consensus        32 w~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~---~~~----------~~~~~~~~~   96 (312)
                      |++ +++++..+ .+|.+.|++++|+| +      +++|++|+.||+|++||+.+   +..          ..+..+.+.
T Consensus        48 w~~-~g~~~~~~~~~h~~~V~~~~~s~~~------~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~  120 (437)
T 3gre_A           48 GNL-RGKLIATLMENEPNSITSSAVSPGE------TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMI  120 (437)
T ss_dssp             GGC-CCCEEEEECTTTTSCEEEEEEECSS------SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEEC
T ss_pred             ccc-cceEEeeeccCCCCceEEEEECCCC------CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEe
Confidence            775 57788888 89999999999999 8      89999999999999999877   321          234455667


Q ss_pred             CCCceEEEEeCCCcEEEEcCC---CCcceeeee---eeecccCC--CccceeEEE--ECCCCCeEEEeecCCeEEE-ecc
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPD---PTTGLWLET---ARVGEVGG--NTLGFYGCK--FGPRGDYIIAHGFQGSLHL-DVT  165 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~---~~~~~~~~--~~~~v~~~~--~~~~~~~l~~~~~~~~i~~-d~~  165 (312)
                      +++.+|++++.||.|++||+.   .++......   .....+..  +...+.++.  ++++++++++++.|+.|++ |++
T Consensus       121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~  200 (437)
T 3gre_A          121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR  200 (437)
T ss_dssp             TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred             CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            788899999999999999995   322111111   00111111  455677777  6789999999999999999 888


Q ss_pred             cCceeeeecc--cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc----CCCc
Q psy15191        166 TWKQIQTLPC--HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS----HDSR  239 (312)
Q Consensus       166 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~  239 (312)
                      +.+....+..  |...|++++|+|++++|++++.||.|++||+++.+.+..+...      |...|.+++|+    |++.
T Consensus       201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~s~~~~  274 (437)
T 3gre_A          201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG------DHAPITHVEVCQFYGKNSV  274 (437)
T ss_dssp             TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT------TCEEEEEEEECTTTCTTEE
T ss_pred             CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC------CCCceEEEEeccccCCCcc
Confidence            8888888887  8899999999999999999999999999999987777666532      67789999655    5688


Q ss_pred             eEEEeccCCeEEEEecCCCCCCccccccc------cccee------EEeec--cCcceeEEEeccCCCeEEEEecCCCcc
Q psy15191        240 YFLTISRDGVCVVWGLGEPPTEEDLVQNT------LWPEV------QKLYG--HGYEIYSLAASHDGTLLASACKATKPE  305 (312)
Q Consensus       240 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~------~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~  305 (312)
                      +|++++.||.|++||+..+.....+....      .+.+.      ..+.+  |...|++++|+ ++++|++|     +.
T Consensus       275 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~-----~~  348 (437)
T 3gre_A          275 IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD-----EA  348 (437)
T ss_dssp             EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE-----GG
T ss_pred             EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec-----CC
Confidence            99999999999999998764221111000      00000      01233  77889999999 78999999     55


Q ss_pred             cceEEeC
Q psy15191        306 HAAIIIW  312 (312)
Q Consensus       306 dg~i~iW  312 (312)
                      ||.|++|
T Consensus       349 d~~i~~w  355 (437)
T 3gre_A          349 TSSIVMF  355 (437)
T ss_dssp             GTEEEEE
T ss_pred             CCeEEEE
Confidence            5559998

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.7e-34  Score=230.77  Aligned_cols=214  Identities=19%  Similarity=0.260  Sum_probs=166.1

Q ss_pred             EeCCC--CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC-
Q psy15191         32 WNGEG--GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK-   98 (312)
Q Consensus        32 w~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~-   98 (312)
                      |+..+  .+++.++.+|.++|++++|+|.    .++++|++|+.|++|++||+.+++.          ..+..+.++++ 
T Consensus        36 w~~~~~~~~~~~~l~gH~~~V~~v~~s~~----~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~  111 (297)
T 2pm7_B           36 FEVEGETHKLIDTLTGHEGPVWRVDWAHP----KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE  111 (297)
T ss_dssp             EEBCSSCBCCCEEECCCSSCEEEEEECCG----GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred             EecCCCCcEEEEEEccccCCeEEEEecCC----CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence            55432  3567889999999999999863    2378999999999999999987642          12333445554 


Q ss_pred             -CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-------------CCeEEEeecCCeEEE-e
Q psy15191         99 -QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-------------GDYIIAHGFQGSLHL-D  163 (312)
Q Consensus        99 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~~~~i~~-d  163 (312)
                       +.+|++++.|+.|++||+++......     ..+.+|...|.+++|+|+             +++|++|+.|+.|++ |
T Consensus       112 ~g~~l~s~s~d~~v~~wd~~~~~~~~~-----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd  186 (297)
T 2pm7_B          112 YGPMLLVASSDGKVSVVEFKENGTTSP-----IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWK  186 (297)
T ss_dssp             GCSEEEEEETTSEEEEEEBCSSSCBCC-----EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEE
T ss_pred             CCcEEEEEECCCcEEEEEecCCCceee-----eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEE
Confidence             67999999999999999986432111     122478889999999997             578999999999999 6


Q ss_pred             cccCc----eeeeecccCCceeEEEECCCC---CEEEEEecCCeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEE
Q psy15191        164 VTTWK----QIQTLPCHQLTITQLAFSPDD---THLVSVSRDRRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       164 ~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                      +++..    ....+.+|...|.+++|+|++   .+|++++.|++|++||++....  ......    ...|...|.+++|
T Consensus       187 ~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~----~~~~~~~v~~~~~  262 (297)
T 2pm7_B          187 YNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLK----EEKFPDVLWRASW  262 (297)
T ss_dssp             EETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS----SSCCSSCEEEEEE
T ss_pred             EcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeee----cccCCCcEEEEEE
Confidence            55443    455677899999999999984   8999999999999999986432  111110    0116778999999


Q ss_pred             cCCCceEEEeccCCeEEEEecCCC
Q psy15191        235 SHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       235 ~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      +|++++||+++.||.|++|+....
T Consensus       263 s~~g~~las~~~D~~v~lw~~~~~  286 (297)
T 2pm7_B          263 SLSGNVLALSGGDNKVTLWKENLE  286 (297)
T ss_dssp             CSSSCCEEEEETTSCEEEEEECTT
T ss_pred             CCCCCEEEEEcCCCcEEEEEECCC
Confidence            999999999999999999998643

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.8e-36  Score=253.86  Aligned_cols=225  Identities=10%  Similarity=-0.019  Sum_probs=166.7

Q ss_pred             CceEEEecCCCcEEEeeecCCccc------------ccccccCCCC------CceEEEEeCCCcEEEEcCCCCcce---e
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY------------LPYHMRDDSK------QLHLLSCSMDKSIIVWAPDPTTGL---W  123 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~------~~~l~~~~~d~~i~i~d~~~~~~~---~  123 (312)
                      ++.|++++.|++|+|||+.+++..            .+..+.++|.      +.+|++++.||+|++||+......   .
T Consensus       173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~  252 (524)
T 2j04_B          173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF  252 (524)
T ss_dssp             ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred             hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence            667778889999999999876531            1222333443      569999999999999999865321   0


Q ss_pred             -eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc-eeeeecccCCceeEE--EECCCC-CEEEEEec
Q psy15191        124 -LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLPCHQLTITQL--AFSPDD-THLVSVSR  197 (312)
Q Consensus       124 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~  197 (312)
                       ....+...+.+|...|.+++|++++ .|++|+.||.|++ |+++.. ....+.+|...|.++  +|+|++ .+|++++.
T Consensus       253 ~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~  331 (524)
T 2j04_B          253 KMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV  331 (524)
T ss_dssp             ECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred             eeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence             0011122345788999999999864 7999999999999 666543 334567899999999  578887 89999999


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY  277 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  277 (312)
                      |++|+|||+++.+....+....     ....|.+++|+|+++.|++++.|+.|++||++.+.            ++..+.
T Consensus       332 D~tvklWD~~~~~~~~~~~~~~-----~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~------------~~~~l~  394 (524)
T 2j04_B          332 DGYFYIFNPKDIATTKTTVSRF-----RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF------------AVHPLV  394 (524)
T ss_dssp             TSEEEEECGGGHHHHCEEEEEC-----SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT------------CCEEEE
T ss_pred             CCeEEEEECCCCCccccccccc-----ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc------------cceeee
Confidence            9999999999866554444311     11247889999999999999999999999998763            456788


Q ss_pred             ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        278 GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       278 ~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|.+.|++++|+|+|++|++|+.|     |+|++|
T Consensus       395 gH~~~V~sva~Sp~g~~l~Sgs~D-----gtv~lw  424 (524)
T 2j04_B          395 SRETTITAIGVSRLHPMVLAGSAD-----GSLIIT  424 (524)
T ss_dssp             ECSSCEEEEECCSSCCBCEEEETT-----TEEECC
T ss_pred             cCCCceEEEEeCCCCCeEEEEECC-----CEEEEE
Confidence            999999999999999999999555     459998

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=3.5e-34  Score=269.65  Aligned_cols=285  Identities=19%  Similarity=0.273  Sum_probs=229.8

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEE-------------------eCCCCceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKW-------------------NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD   67 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w-------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~   67 (312)
                      .+|+..+++.+.++.+|...|.+++|                   +..+++.+..+.+|...|.+++|+|+    .++.+
T Consensus       640 ~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~  715 (1249)
T 3sfz_A          640 QVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNK----SNHLL  715 (1249)
T ss_dssp             EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS----SSCCE
T ss_pred             EEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecC----CCceE
Confidence            58999999999999999999999984                   44557788899999999999999996    44678


Q ss_pred             EEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee-----------
Q psy15191         68 LVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR-----------  128 (312)
Q Consensus        68 l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------  128 (312)
                      +++|+.|+.|++||+.++...        .+..+.+++++..+++++.||.|++||+.+.+........           
T Consensus       716 l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~  795 (1249)
T 3sfz_A          716 LATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPE  795 (1249)
T ss_dssp             EEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------
T ss_pred             EEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccc
Confidence            999999999999999887752        3445566788889999999999999998764322111000           


Q ss_pred             -------------------------------------ecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee
Q psy15191        129 -------------------------------------VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI  170 (312)
Q Consensus       129 -------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~  170 (312)
                                                           .....+|...+.+++|+|+++++++++.++.+++ |..+....
T Consensus       796 ~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~  875 (1249)
T 3sfz_A          796 DVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV  875 (1249)
T ss_dssp             CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE
T ss_pred             cccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence                                                 0011256788999999999999999999999999 88888888


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe-----------------------------EEEEeccCC-
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR-----------------------------LSLVACSDK-  220 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-----------------------------~~~~~~~~~-  220 (312)
                      ..+.+|...|.+++|+|++++|++++.||.|++||+.+...                             ......... 
T Consensus       876 ~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  955 (1249)
T 3sfz_A          876 ADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ  955 (1249)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred             eecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence            88889999999999999999999999999999999764110                             000111000 


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ........+.+++|+|+++++++|+.||.|++||+..+.            ....+.+|...|++++|+|+|++|++++.
T Consensus       956 ~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~------------~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 1023 (1249)
T 3sfz_A          956 IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR------------VFSSGVGHKKAVRHIQFTADGKTLISSSE 1023 (1249)
T ss_dssp             EEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS------------CEEECCCCSSCCCCEEECSSSSCEEEECS
T ss_pred             EEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc------------eeeecccCCCceEEEEECCCCCEEEEEcC
Confidence            001134578999999999999999999999999998763            56778899999999999999999999955


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                      |     |.|++|
T Consensus      1024 d-----g~i~vw 1030 (1249)
T 3sfz_A         1024 D-----SVIQVW 1030 (1249)
T ss_dssp             S-----SBEEEE
T ss_pred             C-----CEEEEE
Confidence            4     559998

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2.9e-34  Score=251.65  Aligned_cols=272  Identities=15%  Similarity=0.179  Sum_probs=205.6

Q ss_pred             ceEeCCCCeEEEEeccCCC---ceEEEEEeCC-C-------------------CceEEEE-c---cccCcEEEEEEecCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKS---KVMAVKWNGE-G-------------------GKVLYTL-T---NHKSKVMAVKWVLNT   59 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~---~v~~~~w~~~-~-------------------~~~~~~~-~---~h~~~v~~~~~~~~~   59 (312)
                      .+|+..+++.+..+.+|..   .|.+++|+++ +                   ++.+..+ .   +|...|.+++|+ + 
T Consensus       186 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-  263 (615)
T 1pgu_A          186 VFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D-  263 (615)
T ss_dssp             EEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S-
T ss_pred             EEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C-
Confidence            5799999999999999999   9999998877 4                   4566677 5   899999999999 8 


Q ss_pred             CcCCCCceEEEecCCCcEEEeeecCCccccccccc-----------CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191         60 SLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMR-----------DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        60 ~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  128 (312)
                           +.+|++++.|+.|++||+.+++........           ..+++.++++++.|+.|++||+.+.+..  ....
T Consensus       264 -----~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~--~~~~  336 (615)
T 1pgu_A          264 -----SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVL--KTIS  336 (615)
T ss_dssp             -----SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEE--EEEC
T ss_pred             -----CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEE--EEEe
Confidence                 899999999999999999877653221111           0126668999999999999998763221  1111


Q ss_pred             e-----------------------------cccCCCccceeEEEECCCCCeEEEeecCCeEEE-----------------
Q psy15191        129 V-----------------------------GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-----------------  162 (312)
Q Consensus       129 ~-----------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-----------------  162 (312)
                      .                             .. ..|...|.+++| +++..+++++.|+.+++                 
T Consensus       337 ~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~-~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~  414 (615)
T 1pgu_A          337 GHNKGITALTVNPLISGSYDGRIMEWSSSSMH-QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA  414 (615)
T ss_dssp             CCSSCEEEEETTTTEEEETTSCEEETTTTEEE-CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEE
T ss_pred             CCCCCEEEEEecCcEEECCCCeEEEEEchhhc-CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEE
Confidence            0                             00 233444444444 33444455555444444                 


Q ss_pred             ----------------------------------------------------------ecccCcee-eeecccCCceeEE
Q psy15191        163 ----------------------------------------------------------DVTTWKQI-QTLPCHQLTITQL  183 (312)
Q Consensus       163 ----------------------------------------------------------d~~~~~~~-~~~~~~~~~v~~~  183 (312)
                                                                                |..+.+.. ..+..|...|.++
T Consensus       415 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~  494 (615)
T 1pgu_A          415 NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYI  494 (615)
T ss_dssp             CSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEE
T ss_pred             cCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEE
Confidence                                                                      33322222 3344688999999


Q ss_pred             EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC----------CCceEEEeccCCeEEEE
Q psy15191        184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH----------DSRYFLTISRDGVCVVW  253 (312)
Q Consensus       184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~l~s~~~dg~i~iw  253 (312)
                      +|+|++++|++++.||.|++||+.+.+.+..+...      |...|++++|+|          ++++|++++.||.|++|
T Consensus       495 ~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw  568 (615)
T 1pgu_A          495 SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF------RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY  568 (615)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC------CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEE
T ss_pred             EECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC------CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEE
Confidence            99999999999999999999999987776554332      778899999999          99999999999999999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+..+..           ++..+.+|...|++++|+|+++ |++++.|+.     |++|
T Consensus       569 ~~~~~~~-----------~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~-----v~iw  610 (615)
T 1pgu_A          569 SVKRPMK-----------IIKALNAHKDGVNNLLWETPST-LVSSGADAC-----IKRW  610 (615)
T ss_dssp             ESSCTTC-----------CEEETTSSTTCEEEEEEEETTE-EEEEETTSC-----EEEE
T ss_pred             ECCCCce-----------echhhhcCccceEEEEEcCCCC-eEEecCCce-----EEEE
Confidence            9987632           5777889999999999999999 999955555     9999

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-34  Score=241.55  Aligned_cols=228  Identities=17%  Similarity=0.258  Sum_probs=190.0

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCC
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  118 (312)
                      |.+.|++++|+|+      +++|++++.||.|++||......       ..+..+.+.+++.+|++++.|+.|++||+.+
T Consensus       107 ~~~~v~~~~~s~~------~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  180 (425)
T 1r5m_A          107 TTNQVTCLAWSHD------GNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS  180 (425)
T ss_dssp             -CBCEEEEEECTT------SSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred             CCCceEEEEEcCC------CCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence            6779999999999      99999999999999999433221       2344556678888999999999999999987


Q ss_pred             CcceeeeeeeecccCCCccc---------------eeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        119 TTGLWLETARVGEVGGNTLG---------------FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      .+..  ....     .+...               +.+++|+|++ .+++++.++.+++ |+++.+....+..|...|.+
T Consensus       181 ~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~  252 (425)
T 1r5m_A          181 GTVM--QHFE-----LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISV  252 (425)
T ss_dssp             TEEE--EEEC-----CC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEE
T ss_pred             CcEE--EEee-----ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEE
Confidence            5432  2222     22222               8889999875 5888899999999 88888888888889999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      ++|+|++++|++++.|+.|++||+++.+....+..       |...|.+++|+|++ +|++++.|+.|++||+..+.   
T Consensus       253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~---  321 (425)
T 1r5m_A          253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG-------HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT---  321 (425)
T ss_dssp             EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC-------CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE---
T ss_pred             EEECCCCCEEEEEcCCCEEEEEECCCCccceEecC-------CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc---
Confidence            99999999999999999999999998877776654       77889999999999 99999999999999998762   


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                               .+..+..|...|.+++|+|++++|++++.|+.     |++|
T Consensus       322 ---------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-----i~i~  357 (425)
T 1r5m_A          322 ---------LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ-----VNVY  357 (425)
T ss_dssp             ---------EEEEEECTTCCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred             ---------EeEecccCCccEEEEEEcCCCCEEEEEECCCe-----EEEE
Confidence                     67778889999999999999999999965555     9998

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6.6e-34  Score=231.57  Aligned_cols=243  Identities=21%  Similarity=0.222  Sum_probs=191.7

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSK   98 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~   98 (312)
                      +..++.++..+|+||.+.|++|+|+|+     ++++|+||+.|++|+|||+...+.             ..+....++++
T Consensus        23 ~~~~~~~l~~tL~GH~~~V~~v~~sp~-----~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d   97 (340)
T 4aow_A           23 MMTEQMTLRGTLKGHNGWVTQIATTPQ-----FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD   97 (340)
T ss_dssp             ---CEEEEEEEECCCSSCEEEEEECTT-----CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred             ccCCceEEEEEECCccCCEEEEEEeCC-----CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence            344556677889999999999999997     257999999999999999977543             13445566888


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce-eeeeccc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-IQTLPCH  176 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~-~~~~~~~  176 (312)
                      +.++++++.|+.|++|+........  ..     ..+...+..+.++++++++++++.|+.+++ |...... .....+|
T Consensus        98 g~~l~s~~~d~~i~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~  170 (340)
T 4aow_A           98 GQFALSGSWDGTLRLWDLTTGTTTR--RF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH  170 (340)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEE--EE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred             CCEEEEEcccccceEEeecccceee--ee-----cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccc
Confidence            9999999999999999998743222  22     245667888999999999999999999999 4332222 2233478


Q ss_pred             CCceeEEEECCCC--CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        177 QLTITQLAFSPDD--THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       177 ~~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      ...+..++|++++  .++++++.|+.|++||+++.+....+..       |...|++++|+|++++|++|+.||.|++||
T Consensus       171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-------h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd  243 (340)
T 4aow_A          171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-------HTGYLNTVTVSPDGSLCASGGKDGQAMLWD  243 (340)
T ss_dssp             SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-------CCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            8999999998864  5788999999999999998887776665       888999999999999999999999999999


Q ss_pred             cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +....            ++..+. +...|.+++|+|++.++ +++.     |+.|++|
T Consensus       244 ~~~~~------------~~~~~~-~~~~v~~~~~~~~~~~~-~~~~-----d~~i~iw  282 (340)
T 4aow_A          244 LNEGK------------HLYTLD-GGDIINALCFSPNRYWL-CAAT-----GPSIKIW  282 (340)
T ss_dssp             TTTTE------------EEEEEE-CSSCEEEEEECSSSSEE-EEEE-----TTEEEEE
T ss_pred             eccCc------------eeeeec-CCceEEeeecCCCCcee-eccC-----CCEEEEE
Confidence            98762            455555 45689999999987654 5533     4559988

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=5.7e-35  Score=244.77  Aligned_cols=244  Identities=13%  Similarity=0.105  Sum_probs=194.5

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |+..+++....+..| ..+....|+|+      +++|++|+.||.|++||+.++...        .+..+.+++++.+|+
T Consensus        83 ~d~~~~~~~~~~~~~-~~~~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  155 (420)
T 3vl1_A           83 FNTIIRDGSKMLKRA-DYTAVDTAKLQ------MRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI  155 (420)
T ss_dssp             EECCSEETTTTSCSC-CEEEEEEECSS------SCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE
T ss_pred             EEecccceeeEEecC-CceEEEEEecC------CCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE
Confidence            666666555555555 44455567777      899999999999999999877652        344556678888999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc---cC--
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC---HQ--  177 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~---~~--  177 (312)
                      +++.|+.|++||+.+.+..  ..     +.+|...|.+++|+|++++|++++.|+.+++ |+++.+....+..   +.  
T Consensus       156 s~s~d~~i~iwd~~~~~~~--~~-----~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  228 (420)
T 3vl1_A          156 SSSQDMQLKIWSVKDGSNP--RT-----LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDG  228 (420)
T ss_dssp             EEETTSEEEEEETTTCCCC--EE-----EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCC
T ss_pred             EEeCCCeEEEEeCCCCcCc--eE-----EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCC
Confidence            9999999999999875432  22     2378899999999999999999999999999 8877777776653   33  


Q ss_pred             -------------------CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        178 -------------------LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       178 -------------------~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                                         ..+.+++|+|++++|++++.||.|++||+++.+....+...      |...|++++|+|++
T Consensus       229 v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~  302 (420)
T 3vl1_A          229 VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK------FTCSCNSLTVDGNN  302 (420)
T ss_dssp             EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT------TSSCEEEEEECSSC
T ss_pred             ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc------cCCCceeEEEeCCC
Confidence                               44555566899999999999999999999988877666543      77889999999999


Q ss_pred             c-eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        239 R-YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       239 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      + +|++++.||.|++||+..+..           ++..+.+ |...|.++.| +++++|+++     +.||.|++|
T Consensus       303 ~~~l~~g~~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~v~~~~~-~~~~~l~s~-----~~d~~v~iw  361 (420)
T 3vl1_A          303 ANYIYAGYENGMLAQWDLRSPEC-----------PVGEFLINEGTPINNVYF-AAGALFVSS-----GFDTSIKLD  361 (420)
T ss_dssp             TTEEEEEETTSEEEEEETTCTTS-----------CSEEEEESTTSCEEEEEE-ETTEEEEEE-----TTTEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEEcCCCcC-----------chhhhhccCCCCceEEEe-CCCCEEEEe-----cCCccEEEE
Confidence            9 999999999999999988642           3556666 6677888855 688999999     556669998

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=3.6e-34  Score=240.57  Aligned_cols=255  Identities=18%  Similarity=0.214  Sum_probs=196.8

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----------Ccc--------cccccccCCCCCc-e
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----------EGN--------YLPYHMRDDSKQL-H  101 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----------~~~--------~~~~~~~~~~~~~-~  101 (312)
                      .....|.+.|++++|+|+     ++.+|++++.||.|++|++..          ...        ..+..+.+++.+. +
T Consensus       122 ~~~~~h~~~v~~l~~~p~-----~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~  196 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQ-----NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY  196 (430)
T ss_dssp             EEEEEESSCCSEEEEETT-----EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred             EEEEcCCCcEEEEEECCC-----CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence            455679999999999995     256899999999999999986          222        1334455667666 9


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccC---ceeeeeccc
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTW---KQIQTLPCH  176 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~---~~~~~~~~~  176 (312)
                      |++++.||.|++|++...............+..|...|.+++|+| ++..+++++.++.|++ |+++.   .....+..|
T Consensus       197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~  276 (430)
T 2xyi_A          197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH  276 (430)
T ss_dssp             EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred             EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence            999999999999999874321111111223447888999999999 6788999999999999 77765   455566689


Q ss_pred             CCceeEEEECCCCC-EEEEEecCCeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEE
Q psy15191        177 QLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVW  253 (312)
Q Consensus       177 ~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw  253 (312)
                      ...|++++|+|++. +|++++.||.|++||++.. ..+..+..       |...|++++|+|+++ +|++++.||.|+||
T Consensus       277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw  349 (430)
T 2xyi_A          277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVW  349 (430)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-------CSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred             CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-------CCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence            99999999999887 6889999999999999973 44555554       788899999999995 68999999999999


Q ss_pred             ecCCCCCCccccc--ccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        254 GLGEPPTEEDLVQ--NTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       254 d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+...........  ....+.+..+.+|...|++++|+|+++ +|++++     .||.|+||
T Consensus       350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s-----~dg~i~iw  406 (430)
T 2xyi_A          350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS-----EDNIMQVW  406 (430)
T ss_dssp             EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE-----TTSEEEEE
T ss_pred             eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE-----CCCCEEEe
Confidence            9987432111000  000126777888999999999999999 889995     45559998

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2.9e-34  Score=259.47  Aligned_cols=239  Identities=16%  Similarity=0.177  Sum_probs=205.6

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      +..+.+.+|.+.|++++|+|+      +++|++++.||.|++||+.++...        .+....+++++.+|++++.||
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~------~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg   77 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPT------EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF   77 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred             ccceeeecCCCceEEEEECCC------CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC
Confidence            456889999999999999999      999999999999999999887652        345556678888999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC-ceeeeecccCCceeEEEECC
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW-KQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~  187 (312)
                      .|++||+.+++.  ....     .+|...|.+++|+|++++|++++.||.+++ |+.+. .....+.+|...|.+++|+|
T Consensus        78 ~i~vw~~~~~~~--~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p  150 (814)
T 3mkq_A           78 RIRVFNYNTGEK--VVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP  150 (814)
T ss_dssp             EEEEEETTTCCE--EEEE-----ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred             eEEEEECCCCcE--EEEE-----ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence            999999988542  2222     368889999999999999999999999999 76654 55666778999999999999


Q ss_pred             -CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC--CCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        188 -DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH--DSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       188 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                       +++.|++++.||.|++||+.+......+...      +...+..++|+|  ++.+|++++.||.|++||+..+.     
T Consensus       151 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-----  219 (814)
T 3mkq_A          151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-----  219 (814)
T ss_dssp             TEEEEEEEEETTSEEEEEETTCSSCSEEEECC------CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-----
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcceeEEecC------CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----
Confidence             8899999999999999999887776666543      447789999999  99999999999999999997763     


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                             .+..+.+|...|.+++|+|++++|++++.|+.     |++|
T Consensus       220 -------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----v~vw  255 (814)
T 3mkq_A          220 -------CVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-----LKIW  255 (814)
T ss_dssp             -------EEEEEECCSSCEEEEEECSSSSEEEEEETTSC-----EEEE
T ss_pred             -------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-----EEEE
Confidence                   67788899999999999999999999965555     9998

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=5.3e-34  Score=240.75  Aligned_cols=255  Identities=14%  Similarity=0.166  Sum_probs=184.1

Q ss_pred             eEEEEcccc------------CcEEEEEEecCcCcCCCC--ceEEEecCCCcEEEeeecCCcc-----------------
Q psy15191         39 VLYTLTNHK------------SKVMAVKWVLNTSLDPEH--KDLVSCSLDKTAILWKYVSEGN-----------------   87 (312)
Q Consensus        39 ~~~~~~~h~------------~~v~~~~~~~~~~~~~~~--~~l~s~~~dg~i~vw~~~~~~~-----------------   87 (312)
                      ....+.+|.            ..|++++|+|+      +  .+|++++.|+.|++||+..+..                 
T Consensus        73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~------~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~  146 (447)
T 3dw8_B           73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ------KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDP  146 (447)
T ss_dssp             EEEEEECCCCEEEGGGTEEECCCCCEEEECCC------CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------C
T ss_pred             EecccccccccccccccccccCceEEEEEcCC------CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCc
Confidence            577888998            88999999998      6  7899999999999999875221                 


Q ss_pred             -------------------------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcc-eeeeeeeecccCCC
Q psy15191         88 -------------------------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG-LWLETARVGEVGGN  135 (312)
Q Consensus        88 -------------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~  135 (312)
                                                     ..+..+.+++++.+|+++ .|+.|++||+++... ..........+.+|
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  225 (447)
T 3dw8_B          147 TTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEEL  225 (447)
T ss_dssp             CCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGC
T ss_pred             ccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccccccc
Confidence                                           234445567788899998 799999999984221 11111112235578


Q ss_pred             ccceeEEEECCCC-CeEEEeecCCeEEE-ecccCce----eeeecccCC------------ceeEEEECCCCCEEEEEec
Q psy15191        136 TLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQ----IQTLPCHQL------------TITQLAFSPDDTHLVSVSR  197 (312)
Q Consensus       136 ~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~  197 (312)
                      ...|.+++|+|++ ++|++++.||.|++ |+++.+.    ...+..|..            .|.+++|+|++++|++++.
T Consensus       226 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~  305 (447)
T 3dw8_B          226 TEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY  305 (447)
T ss_dssp             CCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred             CcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence            8899999999998 99999999999999 8777765    566666665            8999999999999999998


Q ss_pred             CCeEEEEEccC-CCeEEEEeccCCCCc--------ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc-
Q psy15191        198 DRRWGLYKRQS-SGRLSLVACSDKTNG--------VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN-  267 (312)
Q Consensus       198 d~~i~~wd~~~-~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-  267 (312)
                       +.|++||++. .+.+..+........        .....+..++|+|++++|++|+.||.|++||+..+......... 
T Consensus       306 -~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~  384 (447)
T 3dw8_B          306 -LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRE  384 (447)
T ss_dssp             -SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCST
T ss_pred             -CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccc
Confidence             9999999987 666655554211000        00001335999999999999999999999999876421100000 


Q ss_pred             -----cccc--------------eeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        268 -----TLWP--------------EVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       268 -----~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                           ....              .......+...|..++|+|++++||+++.+
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~  437 (447)
T 3dw8_B          385 NNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN  437 (447)
T ss_dssp             TCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS
T ss_pred             ccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecc
Confidence                 0000              000011345678999999999999999644

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.4e-33  Score=237.45  Aligned_cols=244  Identities=21%  Similarity=0.364  Sum_probs=201.7

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~  103 (312)
                      |+..+++.+..+.+|...|.+++|  +      +++|++|+.||.|++||+.+++...        +....++  +..++
T Consensus       158 wd~~~~~~~~~~~~h~~~v~~l~~--~------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~  227 (435)
T 1p22_A          158 WDKNTLECKRILTGHTGSVLCLQY--D------ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMV  227 (435)
T ss_dssp             EESSSCCEEEEECCCSSCEEEEEC--C------SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEE
T ss_pred             EeCCCCeEEEEEcCCCCcEEEEEE--C------CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEE
Confidence            899999999999999999999998  5      6799999999999999999887632        2223333  34899


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.||.|++||+.+.+.....    ....+|...|.+++|  +++++++++.||.|++ |+++.+....+.+|...|.+
T Consensus       228 s~s~dg~i~vwd~~~~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~  301 (435)
T 1p22_A          228 TCSKDRSIAVWDMASPTDITLR----RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC  301 (435)
T ss_dssp             EEETTSCEEEEECSSSSCCEEE----EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred             EeeCCCcEEEEeCCCCCCceee----eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEE
Confidence            9999999999999875533221    223478889999999  7889999999999999 98888888899999999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      +.+  +++++++++.||.|++||+++.+.+..+..       |...|.+++|  ++.+|++|+.||.|++||+..+....
T Consensus       302 ~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~  370 (435)
T 1p22_A          302 LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-------HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPR  370 (435)
T ss_dssp             EEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTT
T ss_pred             EEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC-------CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcc
Confidence            999  468999999999999999999888877765       7888999999  78899999999999999997653211


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..   ....++..+.+|.+.|.+++|  ++++|+++     +.||.|++|
T Consensus       371 ~~---~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~-----s~Dg~i~iw  410 (435)
T 1p22_A          371 AP---AGTLCLRTLVEHSGRVFRLQF--DEFQIVSS-----SHDDTILIW  410 (435)
T ss_dssp             SC---TTTTEEEEECCCSSCCCCEEE--CSSCEEEC-----CSSSEEEEE
T ss_pred             cc---ccchheeeccCCCCCeEEEEe--CCCEEEEE-----eCCCEEEEE
Confidence            10   011157788899999999999  78899999     455559998

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-34  Score=259.08  Aligned_cols=247  Identities=16%  Similarity=0.295  Sum_probs=190.5

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC--CceEEEEeC
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK--QLHLLSCSM  107 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~--~~~l~~~~~  107 (312)
                      +..+.+|.+.|++++|+|+      +++|++|+.||.|++||+..+..          ..+..+.++++  +.++++++.
T Consensus         2 ~~~l~gH~~~V~~l~~s~d------g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~   75 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDYY------GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY   75 (753)
T ss_dssp             ------CCCCEEEECCCSS------SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET
T ss_pred             eeecccCcceeEEEEECCC------CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC
Confidence            4567899999999999999      89999999999999999974322          13344445555  789999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCc--eeeeecccCCceeE
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQLTITQ  182 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~~~v~~  182 (312)
                      ||.|++||+.+++......     ...|...|.+++|+|+  ++.+++++.||.|++ |+++..  ....+.+|...|.+
T Consensus        76 Dg~I~vwd~~~~~~~~~~~-----~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~  150 (753)
T 3jro_A           76 DGKVLIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS  150 (753)
T ss_dssp             TSCEEEEEEETTEEEEEEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred             CCeEEEEECCCCccccccc-----ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEE
Confidence            9999999998754222222     3478899999999999  999999999999999 655542  23334579999999


Q ss_pred             EEECC-------------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC---CceEEEecc
Q psy15191        183 LAFSP-------------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD---SRYFLTISR  246 (312)
Q Consensus       183 ~~~~~-------------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~  246 (312)
                      ++|+|             ++.++++++.||.|++||+++...........   ..|...|++++|+|+   +++|++++.
T Consensus       151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~---~~h~~~V~~l~~sp~~~~~~~l~s~s~  227 (753)
T 3jro_A          151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAWSPTVLLRSYLASVSQ  227 (753)
T ss_dssp             EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred             EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee---cCCCCcEEEEEeccCCCCCCEEEEEec
Confidence            99999             58999999999999999999775332211110   118889999999999   899999999


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ||.|++||+..+.....       ........|...|++++|+|+|++|++++.|+     .|++|
T Consensus       228 Dg~I~iwd~~~~~~~~~-------~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vw  281 (753)
T 3jro_A          228 DRTCIIWTQDNEQGPWK-------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLW  281 (753)
T ss_dssp             SSCEEEEEESSSSSCCB-------CCBSSSSCCSSCCCCEEECTTTCCEEEECSSS-----CEECC
T ss_pred             CCEEEEecCCCCCCcce-------eEEeccCCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEE
Confidence            99999999987632111       02333456889999999999999999995554     49998

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2.6e-34  Score=238.98  Aligned_cols=242  Identities=13%  Similarity=0.105  Sum_probs=192.7

Q ss_pred             eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc------c--------cccccccCCCC----C-
Q psy15191         39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG------N--------YLPYHMRDDSK----Q-   99 (312)
Q Consensus        39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~------~--------~~~~~~~~~~~----~-   99 (312)
                      ....+.+|.+.|++++|+|.        +|++|+.||.|++||+.+++      .        ..+..+.+.++    + 
T Consensus         8 ~~~~~~~h~~~i~~~~~~~~--------~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~   79 (397)
T 1sq9_A            8 TANAGKAHDADIFSVSACNS--------FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF   79 (397)
T ss_dssp             EEEESSCSSSCEEEEEECSS--------EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred             hhhhhhhhhcCeEEEEecCC--------eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence            45678899999999999775        99999999999999999887      2        12344445566    7 


Q ss_pred             --ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC-----ccceeEEEEC----CCCCe-EEEeecCCeEEE-eccc
Q psy15191        100 --LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN-----TLGFYGCKFG----PRGDY-IIAHGFQGSLHL-DVTT  166 (312)
Q Consensus       100 --~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~~~~i~~-d~~~  166 (312)
                        .+|++++.|+.|++||+.+.+...  ......+..|     ...|.+++|+    |++++ |++++.||.|++ |+++
T Consensus        80 ~~~~l~s~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~  157 (397)
T 1sq9_A           80 ELCLVATTSFSGDLLFYRITREDETK--KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP  157 (397)
T ss_dssp             EEEEEEEEETTSCEEEEEEEECTTTC--CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred             cccEEEEEcCCCCEEEEEccCCcccc--cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence              899999999999999998754310  0011222345     5889999999    99999 999999999999 6665


Q ss_pred             ------Cceee-----ee-------cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc---
Q psy15191        167 ------WKQIQ-----TL-------PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH---  225 (312)
Q Consensus       167 ------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~---  225 (312)
                            .+...     .+       ..|...|.+++|+|++ +|++++.|+.|++||+++.+.+..+.....    |   
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----h~~~  232 (397)
T 1sq9_A          158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS----MINN  232 (397)
T ss_dssp             SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------CC
T ss_pred             cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccc----cccc
Confidence                  44333     55       3478899999999999 999999999999999998877776664111    4   


Q ss_pred             ceeeEEEEEcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeec-------------cCcceeEEEec
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-------------HGYEIYSLAAS  289 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~s  289 (312)
                      ...|.+++|+|++++|++++.|   |.|++||+..+.            .+..+.+             |...|.+++|+
T Consensus       233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  300 (397)
T 1sq9_A          233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE------------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFN  300 (397)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC------------EEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred             CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc------------ccceeccCcccccccccccccCCcEEEEEEC
Confidence            6789999999999999999999   999999998763            5677777             99999999999


Q ss_pred             cCCCeEEEEecCCCcccceEEeC
Q psy15191        290 HDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       290 ~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++++|++++.|     |.|++|
T Consensus       301 ~~~~~l~~~~~d-----g~i~iw  318 (397)
T 1sq9_A          301 DSGETLCSAGWD-----GKLRFW  318 (397)
T ss_dssp             SSSSEEEEEETT-----SEEEEE
T ss_pred             CCCCEEEEEeCC-----CeEEEE
Confidence            999999999554     559998

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.5e-34  Score=243.28  Aligned_cols=249  Identities=12%  Similarity=0.123  Sum_probs=185.5

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCC-CCceEEEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDS-KQLHLLSC  105 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~-~~~~l~~~  105 (312)
                      .+......+|...|++|+|+|.     ++++||+|+.||.|+|||+.++..          ..+..+.++| ++.+|+++
T Consensus       109 ~~~~~~~~~~~~~V~~l~~~P~-----~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~  183 (435)
T 4e54_B          109 YRILQKAAPFDRRATSLAWHPT-----HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS  183 (435)
T ss_dssp             TTSCCEEEECSSCEEEEEECSS-----CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEE
T ss_pred             eeecccCCCCCCCEEEEEEeCC-----CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEE
Confidence            3445667789999999999995     257899999999999999987653          1344455565 56799999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      +.|++|++||+++.......     ....+...+.+++|+|++++|++|+.||.|++ |++. +....+.+|...|.+++
T Consensus       184 s~D~~v~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~  257 (435)
T 4e54_B          184 SMEGTTRLQDFKGNILRVFA-----SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVA  257 (435)
T ss_dssp             CSSSCEEEEETTSCEEEEEE-----CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEE
T ss_pred             eCCCEEEEeeccCCceeEEe-----ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeee
Confidence            99999999999864322111     11234556788999999999999999999999 5543 34455668999999999


Q ss_pred             ECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc
Q psy15191        185 FSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED  263 (312)
Q Consensus       185 ~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  263 (312)
                      |+|++. +|++++.|+.|++||+++.+....+..    ...|...|++++|+|++++|++++.||.|+|||+..+..   
T Consensus       258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~---  330 (435)
T 4e54_B          258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY----SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC---  330 (435)
T ss_dssp             ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSB----CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS---
T ss_pred             ecCCCceEEEEecCcceeeEEecccccccceEEE----eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc---
Confidence            999876 788999999999999987654322211    112888999999999999999999999999999987642   


Q ss_pred             cccccccceeEEeeccCc------ceeEEEeccCCCeEEEEecCCC-------cccceEEeC
Q psy15191        264 LVQNTLWPEVQKLYGHGY------EIYSLAASHDGTLLASACKATK-------PEHAAIIIW  312 (312)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~s~d~~-------~~dg~i~iW  312 (312)
                               ...+..|..      .+....|+|++.++++++.+..       .+++.|++|
T Consensus       331 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iw  383 (435)
T 4e54_B          331 ---------PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVF  383 (435)
T ss_dssp             ---------EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEE
T ss_pred             ---------ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEE
Confidence                     333333321      2345678888887777753221       234568777

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-33  Score=225.15  Aligned_cols=234  Identities=18%  Similarity=0.214  Sum_probs=192.7

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      .++...+.+|.+.|++++| |+      +.+|++++.||.|++||+.++...        .+..+.+++++.++++++.|
T Consensus         8 ~~~~~~l~~h~~~v~~~~~-~~------~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d   80 (313)
T 3odt_A            8 YQLSATLKGHDQDVRDVVA-VD------DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD   80 (313)
T ss_dssp             CEEEEEECCCSSCEEEEEE-EE------TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred             HHHHHHhhCCCCCcEEEEe-cC------CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence            4788899999999999999 88      889999999999999999877642        34445567788899999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP  187 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~  187 (312)
                      +.|++|++.......    ....+..|...+.+++|  +++.+++++.|+.+++ |  ..+....+..|...+.+++|+|
T Consensus        81 g~i~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~  152 (313)
T 3odt_A           81 TMINGVPLFATSGED----PLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS  152 (313)
T ss_dssp             SCEEEEETTCCTTSC----C-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE
T ss_pred             CeEEEEEeeecCCCC----cccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc
Confidence            999999988643211    12223478889999999  6789999999999999 5  3445556668999999999998


Q ss_pred             -CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        188 -DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       188 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                       +++++++++.|+.|++||.  .+....+...      +...+.+++|+|++. +++++.||.|++||+..+.       
T Consensus       153 ~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~------~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-------  216 (313)
T 3odt_A          153 FSENKFLTASADKTIKLWQN--DKVIKTFSGI------HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-------  216 (313)
T ss_dssp             TTTTEEEEEETTSCEEEEET--TEEEEEECSS------CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC-------
T ss_pred             CCCCEEEEEECCCCEEEEec--CceEEEEecc------CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh-------
Confidence             9999999999999999993  3334444332      677899999999998 9999999999999998763       


Q ss_pred             ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                           .+..+.+|...|++++|+|++ .|++++.     ||.|++|
T Consensus       217 -----~~~~~~~~~~~i~~~~~~~~~-~l~~~~~-----dg~v~iw  251 (313)
T 3odt_A          217 -----VLRTYEGHESFVYCIKLLPNG-DIVSCGE-----DRTVRIW  251 (313)
T ss_dssp             -----EEEEEECCSSCEEEEEECTTS-CEEEEET-----TSEEEEE
T ss_pred             -----hhhhhhcCCceEEEEEEecCC-CEEEEec-----CCEEEEE
Confidence                 678888999999999999999 6889954     4559998

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.3e-33  Score=255.35  Aligned_cols=236  Identities=14%  Similarity=0.166  Sum_probs=200.2

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |+..+++.+..+.+|..+|++++|+|+      +++|++++.||.|++||+.+++..        .+....+++++.+++
T Consensus        40 wd~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  113 (814)
T 3mkq_A           40 WNYETQVEVRSIQVTETPVRAGKFIAR------KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVL  113 (814)
T ss_dssp             EETTTTEEEEEEECCSSCEEEEEEEGG------GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred             EECCCCceEEEEecCCCcEEEEEEeCC------CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEE
Confidence            555567788899999999999999999      899999999999999999887752        345566788888999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeeccc-CCce
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH-QLTI  180 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~-~~~v  180 (312)
                      +++.||.|++||+.+.. ....     .+.+|...|.+++|+| +++.+++++.||.|++ |+.+......+..+ ...+
T Consensus       114 ~~~~dg~i~vw~~~~~~-~~~~-----~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v  187 (814)
T 3mkq_A          114 SGSDDLTVKLWNWENNW-ALEQ-----TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV  187 (814)
T ss_dssp             EEETTSEEEEEEGGGTS-EEEE-----EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred             EEcCCCEEEEEECCCCc-eEEE-----EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence            99999999999998642 1112     2236888999999999 8899999999999999 76666655555544 4889


Q ss_pred             eEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        181 TQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       181 ~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ..++|+|  ++.+|++++.||.|++||+++.+....+..       |...|.+++|+|++++|++++.||.|++||+.++
T Consensus       188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~  260 (814)
T 3mkq_A          188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY  260 (814)
T ss_dssp             CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred             EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            9999999  999999999999999999998887777765       7788999999999999999999999999999876


Q ss_pred             CCCcccccccccceeEEeeccCcceeEEEeccCCC--eEEEE
Q psy15191        259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT--LLASA  298 (312)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~  298 (312)
                      .            .+..+..|...+.+++|+|++.  +++++
T Consensus       261 ~------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  290 (814)
T 3mkq_A          261 K------------VEKTLNVGLERSWCIATHPTGRKNYIASG  290 (814)
T ss_dssp             S------------EEEEECCSSSSEEEEEECTTCGGGEEEEE
T ss_pred             c------------EEEEeecCCCcEEEEEEccCCCceEEEEE
Confidence            3            6778888999999999999987  45555

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.9e-33  Score=228.25  Aligned_cols=231  Identities=19%  Similarity=0.253  Sum_probs=190.0

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      .....+.+|.+.|++++|+|+      +++|++++.||.|++||+.+++..        .+..+.+++++.+|++++.|+
T Consensus        23 ~~~~~l~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg   96 (369)
T 3zwl_B           23 MKAIKLTGHERPLTQVKYNKE------GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY   96 (369)
T ss_dssp             EEEEEEECCSSCEEEEEECTT------SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred             cccEEEEEeeceEEEEEEcCC------CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence            345668899999999999999      999999999999999999887652        344455677888999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-----CeEEE-ecccCce-----------eee
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-----GSLHL-DVTTWKQ-----------IQT  172 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~-d~~~~~~-----------~~~  172 (312)
                      .|++||+.+.+..  ....      +...+.+++|+|+++++++++.+     +.+.+ |+.+...           ...
T Consensus        97 ~i~iwd~~~~~~~--~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~  168 (369)
T 3zwl_B           97 SIKLWDVSNGQCV--ATWK------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK  168 (369)
T ss_dssp             EEEEEETTTCCEE--EEEE------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred             eEEEEECCCCcEE--EEee------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence            9999999885432  2222      56679999999999999999998     99999 5444322           222


Q ss_pred             ecccCC--ceeEEEECCCCCEEEEEecCCeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe
Q psy15191        173 LPCHQL--TITQLAFSPDDTHLVSVSRDRRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV  249 (312)
Q Consensus       173 ~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~  249 (312)
                      +..|..  .+.+++|+|++++|++++.||.|++||+++ ......+..       |...|.+++|+|++++|++++.||.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~  241 (369)
T 3zwl_B          169 IITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-------HEKSISDMQFSPDLTYFITSSRDTN  241 (369)
T ss_dssp             EECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-------CSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             ccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-------CCCceeEEEECCCCCEEEEecCCce
Confidence            234555  899999999999999999999999999998 455555554       7788999999999999999999999


Q ss_pred             EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       250 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      |++||+..+.            .+..+. +...+..++|+|+++++++++.++
T Consensus       242 i~v~d~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~  281 (369)
T 3zwl_B          242 SFLVDVSTLQ------------VLKKYE-TDCPLNTAVITPLKEFIILGGGQE  281 (369)
T ss_dssp             EEEEETTTCC------------EEEEEE-CSSCEEEEEECSSSSEEEEEECCC
T ss_pred             EEEEECCCCc------------eeeeec-CCCCceeEEecCCCceEEEeecCC
Confidence            9999998763            444444 788899999999999999997655

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=5.7e-34  Score=240.53  Aligned_cols=243  Identities=14%  Similarity=0.149  Sum_probs=181.6

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------------------------ccccccc
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------------------------YLPYHMR   94 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------------------------~~~~~~~   94 (312)
                      |.+.|++++|+|+      +++||+|+.||.|+|||+.++..                               ..+..+.
T Consensus        27 ~~~~V~~v~~s~~------g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~  100 (447)
T 3dw8_B           27 EADIISTVEFNHS------GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR  100 (447)
T ss_dssp             GGGSEEEEEECSS------SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred             ccCcEEEEEECCC------CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence            6789999999999      99999999999999999987651                               1144455


Q ss_pred             CCCCC--ceEEEEeCCCcEEEEcCCCCcceee--------------------------------e-eeeecccCCCccce
Q psy15191         95 DDSKQ--LHLLSCSMDKSIIVWAPDPTTGLWL--------------------------------E-TARVGEVGGNTLGF  139 (312)
Q Consensus        95 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~--------------------------------~-~~~~~~~~~~~~~v  139 (312)
                      +.+++  ..+++++.|+.|++||+.+......                                . ........+|...|
T Consensus       101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  180 (447)
T 3dw8_B          101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI  180 (447)
T ss_dssp             ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred             EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence            56666  6899999999999999875322100                                0 00001135788999


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-eccc-Cceee-------eecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCC
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQ-------TLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSS  209 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~  209 (312)
                      .+++|+|++++|+++ .|+.|++ |+++ .....       .+.+|...|.+++|+|++ ++|++++.||.|++||+++.
T Consensus       181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  259 (447)
T 3dw8_B          181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS  259 (447)
T ss_dssp             CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred             EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence            999999999999998 7999999 5542 22222       244789999999999998 99999999999999999987


Q ss_pred             Ce----EEEEeccCCCC-----cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC
Q psy15191        210 GR----LSLVACSDKTN-----GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG  280 (312)
Q Consensus       210 ~~----~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (312)
                      +.    ...+.......     ..|...|.+++|+|++++|++++. +.|++||+.....           ++..+.+|.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~-----------~~~~~~~~~  327 (447)
T 3dw8_B          260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR-----------PVETYQVHE  327 (447)
T ss_dssp             SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS-----------CSCCEESCG
T ss_pred             ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc-----------ccceeeccc
Confidence            75    45555421100     002238999999999999999999 9999999986321           455566665


Q ss_pred             cc---------------eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        281 YE---------------IYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       281 ~~---------------v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..               +..++|+|++++|++|+     .||.|++|
T Consensus       328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s-----~dg~v~iw  369 (447)
T 3dw8_B          328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS-----YNNFFRMF  369 (447)
T ss_dssp             GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC-----STTEEEEE
T ss_pred             cccccccccccccccccceEEEECCCCCEEEEec-----cCCEEEEE
Confidence            32               23499999999999994     55559998

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=231.69  Aligned_cols=240  Identities=11%  Similarity=0.109  Sum_probs=186.8

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCc-eEEEecC---CCcEEEeeecCCccc---------ccccccCCCC---CceEEE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSL---DKTAILWKYVSEGNY---------LPYHMRDDSK---QLHLLS  104 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~---dg~i~vw~~~~~~~~---------~~~~~~~~~~---~~~l~~  104 (312)
                      ..+++|...|++++|+|+      +. ++++|+.   |+.|++||+.+++..         .+..+.++++   +.++++
T Consensus        12 ~~~~~h~~~v~~~~~~p~------~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~   85 (357)
T 3i2n_A           12 HIQKGFNYTVFDCKWVPC------SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLAT   85 (357)
T ss_dssp             EEEEECSSCEEEEEECTT------SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred             hhccCCCCceEEEEEcCC------CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence            455789999999999998      64 5566766   999999999987652         3344455565   689999


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE------ECCCCCeEEEeecCCeEEE-ecccCc-eeeeeccc
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK------FGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLPCH  176 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~  176 (312)
                      ++.|+.|++||+.+.+. .     ...+.+|...|.++.      |+|++++|++++.|+.+++ |+++.+ ....+..|
T Consensus        86 ~~~dg~i~iwd~~~~~~-~-----~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  159 (357)
T 3i2n_A           86 GDFGGNLHIWNLEAPEM-P-----VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV  159 (357)
T ss_dssp             EETTSCEEEECTTSCSS-C-----SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred             ecCCCeEEEEeCCCCCc-c-----EEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence            99999999999987541 1     122347888999995      5789999999999999999 666655 45555444


Q ss_pred             CC----ceeEEE----ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC---CCceEEEec
Q psy15191        177 QL----TITQLA----FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH---DSRYFLTIS  245 (312)
Q Consensus       177 ~~----~v~~~~----~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~  245 (312)
                      .+    .+.+++    |+|++++|++++.|+.|++||+++.+......        +...|.+++|+|   ++.+|++++
T Consensus       160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~l~~~~  231 (357)
T 3i2n_A          160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN--------IKNGVCSLEFDRKDISMNKLVATS  231 (357)
T ss_dssp             TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE--------CSSCEEEEEESCSSSSCCEEEEEE
T ss_pred             CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC--------CCCceEEEEcCCCCCCCCEEEEEC
Confidence            43    788888    78999999999999999999999877654433        778899999999   999999999


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                      .||.|++||+.........       ....+.+|...|++++|+|+++ +|++++.     ||.|++|
T Consensus       232 ~dg~i~i~d~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~iw  287 (357)
T 3i2n_A          232 LEGKFHVFDMRTQHPTKGF-------ASVSEKAHKSTVWQVRHLPQNRELFLTAGG-----AGGLHLW  287 (357)
T ss_dssp             STTEEEEEEEEEEETTTEE-------EEEEEECCSSCEEEEEEETTEEEEEEEEET-----TSEEEEE
T ss_pred             CCCeEEEEeCcCCCcccce-------eeeccCCCcCCEEEEEECCCCCcEEEEEeC-----CCcEEEe
Confidence            9999999999875322111       1224558999999999999998 8999954     5559998

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=9.4e-34  Score=232.92  Aligned_cols=249  Identities=12%  Similarity=0.131  Sum_probs=191.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-Ccc---------cccccccCCCCCce
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-EGN---------YLPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-~~~---------~~~~~~~~~~~~~~  101 (312)
                      ++....+.+..+.+|.+.|++++|+|+   ..+|++|++|+.||.|++||+.+ +..         ..+..+.+++++.+
T Consensus        24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  100 (368)
T 3mmy_A           24 DNHNPMKDIEVTSSPDDSIGCLSFSPP---TLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSK  100 (368)
T ss_dssp             CSSCTTCCEECSSCCSSCEEEEEECCT---TSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred             CCCCCcceeEeccCCCCceEEEEEcCC---CCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCE
Confidence            455567788899999999999999998   11148999999999999999987 333         13445566788889


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE--CCCCCeEEEeecCCeEEE-ecccCceeeeecccC-
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF--GPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ-  177 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~-  177 (312)
                      |++++.||.|++||+.+.+..  .      ...|...|.+++|  +|++++|++++.|+.|++ |+++.+....+..+. 
T Consensus       101 l~s~~~dg~v~iwd~~~~~~~--~------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  172 (368)
T 3mmy_A          101 VFTASCDKTAKMWDLSSNQAI--Q------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER  172 (368)
T ss_dssp             EEEEETTSEEEEEETTTTEEE--E------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC
T ss_pred             EEEEcCCCcEEEEEcCCCCce--e------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC
Confidence            999999999999999985422  1      1257889999999  999999999999999999 766665554443221 


Q ss_pred             ----------------------------------------CceeEEEECCCCCE----EEEEecCCeEEEEEccCCC---
Q psy15191        178 ----------------------------------------LTITQLAFSPDDTH----LVSVSRDRRWGLYKRQSSG---  210 (312)
Q Consensus       178 ----------------------------------------~~v~~~~~~~~~~~----l~~~~~d~~i~~wd~~~~~---  210 (312)
                                                              ..+.++.+.++...    +++++.||.|++||++...   
T Consensus       173 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~  252 (368)
T 3mmy_A          173 CYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAK  252 (368)
T ss_dssp             EEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHH
T ss_pred             ceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccc
Confidence                                                    23344444444333    8999999999999998763   


Q ss_pred             eEEEEeccCCC-----CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191        211 RLSLVACSDKT-----NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS  285 (312)
Q Consensus       211 ~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  285 (312)
                      ....+......     ...|...|++++|+|++++|++++.||.|++||+.++.            ++..+.+|...|++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~~~~~v~~  320 (368)
T 3mmy_A          253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART------------KLKTSEQLDQPISA  320 (368)
T ss_dssp             HSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE------------EEEECCCCSSCEEE
T ss_pred             cceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc------------EEEEecCCCCCceE
Confidence            33444431110     00122379999999999999999999999999998763            67888899999999


Q ss_pred             EEeccCCCeEEEEecCCC
Q psy15191        286 LAASHDGTLLASACKATK  303 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~d~~  303 (312)
                      ++|+|+|++|++++.|+.
T Consensus       321 ~~~s~~g~~l~~~s~d~~  338 (368)
T 3mmy_A          321 CCFNHNGNIFAYASSYDW  338 (368)
T ss_dssp             EEECTTSSCEEEEECCCS
T ss_pred             EEECCCCCeEEEEecccc
Confidence            999999999999987754

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.3e-34  Score=257.19  Aligned_cols=159  Identities=13%  Similarity=0.141  Sum_probs=121.1

Q ss_pred             CCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee--ee----c-----ccCCceeEEEECCCCCEEEEEecCCeE
Q psy15191        134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ--TL----P-----CHQLTITQLAFSPDDTHLVSVSRDRRW  201 (312)
Q Consensus       134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~--~~----~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i  201 (312)
                      +|...+.+++|+|++++|++|+.|+.|++ |+.+..+..  .+    .     +|...|.+++|+||+++|++|+.||+|
T Consensus       433 G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV  512 (902)
T 2oaj_A          433 GGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDV  512 (902)
T ss_dssp             CSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCE
T ss_pred             CCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEE
Confidence            34444555677899999999999999999 554443221  11    1     688899999999999999999999999


Q ss_pred             EEEEccCCCe---------------------------------------------EEEEeccCCCCcccceeeEEEEEcC
Q psy15191        202 GLYKRQSSGR---------------------------------------------LSLVACSDKTNGVHKRIIWGVAWSH  236 (312)
Q Consensus       202 ~~wd~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~  236 (312)
                      ++||+.+.+.                                             +..+.       .|...|++++|+|
T Consensus       513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-------~h~~~V~svafSp  585 (902)
T 2oaj_A          513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-------ANKGKTSAINNSN  585 (902)
T ss_dssp             EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-------CCSCSEEEEEECB
T ss_pred             EEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-------cCCCcEEEEEecC
Confidence            9999986532                                             11111       1888999999999


Q ss_pred             CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-ccCcceeEEEec-----cCC---CeEEEEecCCCcccc
Q psy15191        237 DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYEIYSLAAS-----HDG---TLLASACKATKPEHA  307 (312)
Q Consensus       237 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-----~~~---~~l~s~s~d~~~~dg  307 (312)
                      +| +||+|+.|+.|++||+..+.....       ..+..+. +|...|++++|+     |||   ++|++|+.|     +
T Consensus       586 dG-~lAsgs~D~tv~lwd~~~~~~~~~-------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D-----~  652 (902)
T 2oaj_A          586 IG-FVGIAYAAGSLMLIDRRGPAIIYM-------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM-----G  652 (902)
T ss_dssp             TS-EEEEEETTSEEEEEETTTTEEEEE-------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT-----S
T ss_pred             Cc-EEEEEeCCCcEEEEECCCCeEEEE-------eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC-----C
Confidence            99 999999999999999876521000       0012343 899999999999     885   899999554     5


Q ss_pred             eEEeC
Q psy15191        308 AIIIW  312 (312)
Q Consensus       308 ~i~iW  312 (312)
                      +|++|
T Consensus       653 tv~~w  657 (902)
T 2oaj_A          653 EVITY  657 (902)
T ss_dssp             EEEEE
T ss_pred             cEEEE
Confidence            59998

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2.1e-33  Score=234.03  Aligned_cols=246  Identities=14%  Similarity=0.113  Sum_probs=194.6

Q ss_pred             EeCCCC----ceEEEEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCc-------c--------cccc
Q psy15191         32 WNGEGG----KVLYTLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEG-------N--------YLPY   91 (312)
Q Consensus        32 w~~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~-------~--------~~~~   91 (312)
                      |+....    +.+..+.+|.+.|++++|+| +      +++|++|+.||.|++||+.++.       .        ..+.
T Consensus        62 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~------~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~  135 (402)
T 2aq5_A           62 LPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN------DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG  135 (402)
T ss_dssp             EETTCCEECCTTCCCBCCCSSCEEEEEECTTC------TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred             EECccCCCCCCCCceEecCCCCEEEEEeCCCC------CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence            776543    34566889999999999999 7      8899999999999999998863       2        1344


Q ss_pred             cccCCCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce
Q psy15191         92 HMRDDSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ  169 (312)
Q Consensus        92 ~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~  169 (312)
                      .+.+++++ .++++++.|+.|++||+++.+  ......   ...|...|.+++|+|++++|++++.|+.|++ |+++.+.
T Consensus       136 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  210 (402)
T 2aq5_A          136 IVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLG---PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV  210 (402)
T ss_dssp             EEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEEC---TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred             EEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEe---cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence            45567776 589999999999999999743  222220   1368889999999999999999999999999 8888888


Q ss_pred             eeee-cccCCc-eeEEEECCCCCEEEEE---ecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCceEE-
Q psy15191        170 IQTL-PCHQLT-ITQLAFSPDDTHLVSV---SRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRYFL-  242 (312)
Q Consensus       170 ~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-  242 (312)
                      ...+ ..|.+. +..+.|+|++++|+++   +.|+.|++||+++.+. .......      +...+.+++|+|++++|+ 
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~  284 (402)
T 2aq5_A          211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD------TSSGVLLPFFDPDTNIVYL  284 (402)
T ss_dssp             EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC------CCSSCEEEEEETTTTEEEE
T ss_pred             eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc------CCCceeEEEEcCCCCEEEE
Confidence            8777 677765 8999999999999999   7999999999998654 3222221      566799999999999986 


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++.||.|++||+..+..           .+..+..  |...|.+++|+|++.+++++       ++.+++|
T Consensus       285 ~g~~dg~i~i~d~~~~~~-----------~~~~l~~~~~~~~v~~~~~sp~~~~~~s~-------~~~~~~~  338 (402)
T 2aq5_A          285 CGKGDSSIRYFEITSEAP-----------FLHYLSMFSSKESQRGMGYMPKRGLEVNK-------CEIARFY  338 (402)
T ss_dssp             EETTCSCEEEEEECSSTT-----------CEEEEEEECCSSCCSEEEECCGGGSCGGG-------TEEEEEE
T ss_pred             EEcCCCeEEEEEecCCCc-----------ceEeecccccCCcccceEEecccccceec-------ceeEEEE
Confidence            556799999999987642           1333333  56899999999999987754       2347776

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=6.7e-33  Score=260.93  Aligned_cols=259  Identities=18%  Similarity=0.301  Sum_probs=214.4

Q ss_pred             EEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcE
Q psy15191         17 LYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTA   77 (312)
Q Consensus        17 ~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i   77 (312)
                      ...+.+|.+.|++++                   |+..+++.+..+.+|...|.+++|+|+      +++|++++.||.|
T Consensus       608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~------~~~l~s~~~d~~v  681 (1249)
T 3sfz_A          608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSD------DSYIATCSADKKV  681 (1249)
T ss_dssp             SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT------SSEEEEEETTSEE
T ss_pred             eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecC------CCEEEEEeCCCeE
Confidence            345677888888777                   555557788899999999999999999      9999999999999


Q ss_pred             EEeeecCCccc--------ccccccCCC--CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC
Q psy15191         78 ILWKYVSEGNY--------LPYHMRDDS--KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR  147 (312)
Q Consensus        78 ~vw~~~~~~~~--------~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  147 (312)
                      ++||+.+++..        .+....+.+  +...+++++.|+.|++||+.+++  ....     +.+|...|.+++|+|+
T Consensus       682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~-----~~~h~~~v~~~~~sp~  754 (1249)
T 3sfz_A          682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNT-----MFGHTNSVNHCRFSPD  754 (1249)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEE-----ECCCSSCEEEEEECSS
T ss_pred             EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhhe-----ecCCCCCEEEEEEecC
Confidence            99999987753        223333444  55589999999999999998854  2222     2378899999999999


Q ss_pred             CCeEEEeecCCeEEE-ecccCceeeeec-------------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        148 GDYIIAHGFQGSLHL-DVTTWKQIQTLP-------------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      ++++++++.||.|++ |+.+.+....+.             .+...+.+++|+|+++.+++++ ++.+.+||+.+.....
T Consensus       755 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~  833 (1249)
T 3sfz_A          755 DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLA  833 (1249)
T ss_dssp             TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred             CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCcee
Confidence            999999999999999 666655444432             1234788999999999999887 7899999999988877


Q ss_pred             EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      .+...      |...|.+++|+|+++++++++.||.|++||+.++.            .+..+.+|...|.+++|+|+|+
T Consensus       834 ~~~~~------~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~------------~~~~~~~h~~~v~~v~~spdg~  895 (1249)
T 3sfz_A          834 EIHTG------HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL------------KVADCRGHLSWVHGVMFSPDGS  895 (1249)
T ss_dssp             EEECS------SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE------------EEEEECCCSSCEEEEEECTTSS
T ss_pred             EEcCC------CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc------------eeeecCCCccceEEEEECCCCC
Confidence            76543      77889999999999999999999999999998763            6778889999999999999999


Q ss_pred             eEEEEecCCCcccceEEeC
Q psy15191        294 LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       294 ~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|++++.|+.     |++|
T Consensus       896 ~l~s~s~dg~-----v~vw  909 (1249)
T 3sfz_A          896 SFLTASDDQT-----IRVW  909 (1249)
T ss_dssp             EEEEEETTSC-----EEEE
T ss_pred             EEEEEeCCCe-----EEEE
Confidence            9999966555     9998

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.5e-33  Score=229.71  Aligned_cols=237  Identities=13%  Similarity=0.072  Sum_probs=189.7

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----c-------cccccccCCCCCc-eEEEEeCC
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----N-------YLPYHMRDDSKQL-HLLSCSMD  108 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~-------~~~~~~~~~~~~~-~l~~~~~d  108 (312)
                      ....+|.+.|++++|+|+      +++|++++.|+.|++|++.++.    .       ..+..+.+.+++. ++++++.|
T Consensus         5 ~~~~~h~~~v~~~~~s~~------~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d   78 (342)
T 1yfq_A            5 QIEQAPKDYISDIKIIPS------KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ   78 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGG------GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred             ecccCCCCcEEEEEEcCC------CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC
Confidence            345689999999999999      8999999999999999998877    2       2344455667888 89999999


Q ss_pred             CcEEEEcC-CCCcceeeeeeeecccCC--CccceeEEEECCCCCeEEEeecCCeEEE-eccc---------Cceeeeecc
Q psy15191        109 KSIIVWAP-DPTTGLWLETARVGEVGG--NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT---------WKQIQTLPC  175 (312)
Q Consensus       109 ~~i~i~d~-~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~---------~~~~~~~~~  175 (312)
                      |.|++||+ .+.+.        ..+..  |...|.+++|+| ++.+++++.|+.|++ |+++         .+....+. 
T Consensus        79 g~i~~wd~~~~~~~--------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-  148 (342)
T 1yfq_A           79 GEILKVDLIGSPSF--------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-  148 (342)
T ss_dssp             SCEEEECSSSSSSE--------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-
T ss_pred             CeEEEEEeccCCce--------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-
Confidence            99999999 76432        12235  888999999999 999999999999999 6665         55455555 


Q ss_pred             cCCceeEEEECCCCCEEEEEecCCeEEEEEccC-CCeE-EEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEE
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS-SGRL-SLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVV  252 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i  252 (312)
                      |...+.+++|+|++  +++++.|+.|++||+++ .... ......      +...+.+++|+| ++++|++++.||.|++
T Consensus       149 ~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i  220 (342)
T 1yfq_A          149 VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESG------LKYQIRDVALLPKEQEGYACSSIDGRVAV  220 (342)
T ss_dssp             SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECS------CSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred             eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecC------CCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence            88999999999887  99999999999999987 4432 222221      677899999999 9999999999999999


Q ss_pred             EecCCCCCCcccccccccceeEEeeccCc---------ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGY---------EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |++........      .+....+..|..         .|.+++|+|++++|++++.|+.     |++|
T Consensus       221 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-----i~vw  278 (342)
T 1yfq_A          221 EFFDDQGDDYN------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-----ISCW  278 (342)
T ss_dssp             EECCTTCCSTT------CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----EEEE
T ss_pred             EEEcCCCcccc------cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-----EEEE
Confidence            99977611000      014556666654         9999999999999999965555     9998

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=5.7e-33  Score=226.27  Aligned_cols=240  Identities=11%  Similarity=0.103  Sum_probs=186.4

Q ss_pred             EEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeee-cCCcccc---------cccccCCCCCceEEEEeCC
Q psy15191         40 LYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKY-VSEGNYL---------PYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~-~~~~~~~---------~~~~~~~~~~~~l~~~~~d  108 (312)
                      ...+.+|...|++++|+|+      ++ +|++|+.||.|++||+ .+++...         +..+.+.+ +..+++++.|
T Consensus        49 ~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d  121 (342)
T 1yfq_A           49 LLQSLRYKHPLLCCNFIDN------TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD  121 (342)
T ss_dssp             EEEEEECSSCEEEEEEEES------SSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT
T ss_pred             ceeeeecCCceEEEEECCC------CCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC
Confidence            4556689999999999999      99 9999999999999999 7655421         22333455 7799999999


Q ss_pred             CcEEEEcCCCCccee--eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc-Cc--eeeeecccCCceeE
Q psy15191        109 KSIIVWAPDPTTGLW--LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-WK--QIQTLPCHQLTITQ  182 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~--~~~~~~~~~~~v~~  182 (312)
                      +.|++||+++.....  ........+ .+...+.+++|+|++  +++++.++.+++ |+++ ..  .......|...+.+
T Consensus       122 ~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  198 (342)
T 1yfq_A          122 GLIEVIDPRNYGDGVIAVKNLNSNNT-KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRD  198 (342)
T ss_dssp             SEEEEECHHHHTTBCEEEEESCSSSS-SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEE
T ss_pred             CeEEEEcccccccccccccCCeeeEE-eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeE
Confidence            999999987411000  001111222 377889999999988  999999999999 6665 33  22233468889999


Q ss_pred             EEECC-CCCEEEEEecCCeEEEEEccCC------CeEEEEeccCCCC--cccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        183 LAFSP-DDTHLVSVSRDRRWGLYKRQSS------GRLSLVACSDKTN--GVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       183 ~~~~~-~~~~l~~~~~d~~i~~wd~~~~------~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ++|+| +++++++++.||.|++|+++..      +....+.......  ..|...|.+++|+|++++|++++.||.|++|
T Consensus       199 i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vw  278 (342)
T 1yfq_A          199 VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW  278 (342)
T ss_dssp             EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred             EEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEE
Confidence            99999 9999999999999999999876      5566665532110  0134589999999999999999999999999


Q ss_pred             ecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      |+.++.            .+..+.+| ...|.+++  |++++|++++.|+.
T Consensus       279 d~~~~~------------~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          279 NLQTRK------------KIKNFAKFNEDSVVKIA--CSDNILCLATSDDT  315 (342)
T ss_dssp             ETTTTE------------EEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred             cCccHh------------HhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence            998763            67788888 99999999  99999999977664

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.6e-33  Score=227.11  Aligned_cols=211  Identities=19%  Similarity=0.294  Sum_probs=163.7

Q ss_pred             EeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC-
Q psy15191         32 WNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK-   98 (312)
Q Consensus        32 w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~-   98 (312)
                      |+..+++  ++..+.+|.++|++++|+|.    .++++|++|+.|++|++||++++..          ..+..+.++|+ 
T Consensus        40 wd~~~~~~~~~~~l~gH~~~V~~v~~~~~----~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~  115 (316)
T 3bg1_A           40 FDVRNGGQILIADLRGHEGPVWQVAWAHP----MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHD  115 (316)
T ss_dssp             EEEETTEEEEEEEEECCSSCEEEEEECCG----GGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTT
T ss_pred             EEecCCCcEEEEEEcCCCccEEEEEeCCC----CCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCC
Confidence            4444443  46778999999999999863    2378999999999999999987632          12334445555 


Q ss_pred             -CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-----------------CCeEEEeecCCeE
Q psy15191         99 -QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-----------------GDYIIAHGFQGSL  160 (312)
Q Consensus        99 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~~~~i  160 (312)
                       +.+|++++.|+.|++||++......    ......+|...+.+++|+|+                 +++|++++.|+.|
T Consensus       116 ~g~~lasgs~D~~i~lwd~~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v  191 (316)
T 3bg1_A          116 YGLILACGSSDGAISLLTYTGEGQWE----VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLI  191 (316)
T ss_dssp             TCSCEEEECSSSCEEEEEECSSSCEE----ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBC
T ss_pred             CCcEEEEEcCCCCEEEEecCCCCCcc----eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeE
Confidence             6789999999999999998642111    11233578888999999997                 4789999999999


Q ss_pred             EE-eccc---CceeeeecccCCceeEEEECCCC----CEEEEEecCCeEEEEEccCCC----eEEEEeccCCCCccccee
Q psy15191        161 HL-DVTT---WKQIQTLPCHQLTITQLAFSPDD----THLVSVSRDRRWGLYKRQSSG----RLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       161 ~~-d~~~---~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~  228 (312)
                      ++ |.++   +.....+.+|...|.+++|+|++    ++|++++.|++|++||+.+..    ....+..       |...
T Consensus       192 ~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~-------~~~~  264 (316)
T 3bg1_A          192 KLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK-------FNDV  264 (316)
T ss_dssp             CEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE-------CSSC
T ss_pred             EEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc-------CCCc
Confidence            99 5542   23455667899999999999986    789999999999999987631    1112222       6778


Q ss_pred             eEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        229 IWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      |.+++|+|++++||+++.|+.|++|+...
T Consensus       265 v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          265 VWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             EEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             EEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence            99999999999999999999999999754

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=6.6e-32  Score=227.92  Aligned_cols=232  Identities=20%  Similarity=0.325  Sum_probs=194.4

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~  103 (312)
                      |+..+++.+..+.+|...|++++|+++        +|++|+.||+|++||+.+++...        +....+  ++..++
T Consensus       144 wd~~~~~~~~~~~~h~~~v~~~~~~~~--------~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~  213 (445)
T 2ovr_B          144 WSAVTGKCLRTLVGHTGGVWSSQMRDN--------IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVV  213 (445)
T ss_dssp             EETTTCCEEEECCCCSSCEEEEEEETT--------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred             EECCCCcEEEEEcCCCCCEEEEEecCC--------EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEE
Confidence            888899999999999999999999744        89999999999999998876532        222222  345899


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.|+.|++||+.+.+.  ....     .+|...+.++++  +++.+++++.||.|++ |.++.+....+.+|...|.+
T Consensus       214 s~s~dg~i~~wd~~~~~~--~~~~-----~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~  284 (445)
T 2ovr_B          214 SGSRDATLRVWDIETGQC--LHVL-----MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS  284 (445)
T ss_dssp             EEETTSEEEEEESSSCCE--EEEE-----ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEE
T ss_pred             EEeCCCEEEEEECCCCcE--EEEE-----cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEE
Confidence            999999999999987442  2222     368889999999  7889999999999999 88888888888899999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      ++|  ++.++++++.|+.|++||+++.+....+..       |...+.++.+  ++++|++++.||.|++||+.++.   
T Consensus       285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---  350 (445)
T 2ovr_B          285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-------HQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ---  350 (445)
T ss_dssp             EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-------CCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC---
T ss_pred             EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC-------CcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCc---
Confidence            999  789999999999999999999888877665       6677887777  56799999999999999998763   


Q ss_pred             ccccccccceeEEeec---cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYG---HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                               .+..+.+   |...|++++|+  +++|++|+.     ||.|++|
T Consensus       351 ---------~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~-----dg~v~iw  387 (445)
T 2ovr_B          351 ---------CLQTLQGPNKHQSAVTCLQFN--KNFVITSSD-----DGTVKLW  387 (445)
T ss_dssp             ---------EEEEECSTTSCSSCEEEEEEC--SSEEEEEET-----TSEEEEE
T ss_pred             ---------EEEEEccCCCCCCCEEEEEEC--CCEEEEEeC-----CCeEEEE
Confidence                     5666665   88899999996  579999954     5559998

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.9e-33  Score=230.96  Aligned_cols=254  Identities=15%  Similarity=0.208  Sum_probs=193.2

Q ss_pred             EEccccCcEEEEEEecCcCcCC-CCceEEEecCCCcEEEeeecCCccc-------------ccccccCCCC----CceEE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDP-EHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDDSK----QLHLL  103 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~-~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~~~----~~~l~  103 (312)
                      ...+|..+|++++|+|+   ++ ....+++++.++.|++||+.+++..             .+..+.++++    +.+|+
T Consensus        13 ~~~~h~~~v~~i~~~p~---~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~   89 (366)
T 3k26_A           13 LKEDHNQPLFGVQFNWH---SKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLA   89 (366)
T ss_dssp             EECTTCSCEEEEEECTT---CCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred             eecCCCCceEEEEEecc---cCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence            44589999999999983   11 1345666666779999999876542             1223334444    66899


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeee---cccCC
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTL---PCHQL  178 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~---~~~~~  178 (312)
                      +++.||.|++||+.+.+.  +...     .+|...|.+++|+| ++++|++++.||.|++ |+++.+....+   ..|..
T Consensus        90 ~~~~dg~i~v~d~~~~~~--~~~~-----~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  162 (366)
T 3k26_A           90 VAGSRGIIRIINPITMQC--IKHY-----VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD  162 (366)
T ss_dssp             EEETTCEEEEECTTTCCE--EEEE-----ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred             EecCCCEEEEEEchhceE--eeee-----cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence            999999999999987442  2222     36889999999999 9999999999999999 88887777777   67999


Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec---------------------cCCCCcccceeeEEEEEcCC
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC---------------------SDKTNGVHKRIIWGVAWSHD  237 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---------------------~~~~~~~~~~~v~~~~~~~~  237 (312)
                      .|.+++|+|++++|++++.||.|++||+++.+....+..                     .......|...|.+++|+  
T Consensus       163 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  240 (366)
T 3k26_A          163 EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--  240 (366)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred             ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence            999999999999999999999999999987543221111                     000011177889999998  


Q ss_pred             CceEEEeccCCeEEEEecCCCCCCccccc--ccccceeEEeeccCcceeEEEeccC--CCeEEEEecCCCcccceEEeC
Q psy15191        238 SRYFLTISRDGVCVVWGLGEPPTEEDLVQ--NTLWPEVQKLYGHGYEIYSLAASHD--GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       238 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++|++++.||.|++||+...........  ......+..+.+|...|++++|+|+  +++|++++.|     |.|++|
T Consensus       241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-----g~i~vw  314 (366)
T 3k26_A          241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV-----GKLYVW  314 (366)
T ss_dssp             TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT-----SCEEEE
T ss_pred             CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC-----CcEEEE
Confidence            77999999999999999987643221111  1112357778889999999999999  9999999554     459998

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=2.2e-32  Score=215.46  Aligned_cols=261  Identities=10%  Similarity=0.019  Sum_probs=178.3

Q ss_pred             ceEeCCCC---eEEEEeccCCCceEEEEEeCCCCceEEEEcc--ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEee
Q psy15191          7 DVVNGEGG---KVLYTLTNHKSKVMAVKWNGEGGKVLYTLTN--HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK   81 (312)
Q Consensus         7 ~v~~~~~~---~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~   81 (312)
                      .+|++.++   +.++++.+|..+|..+.+.++...++..--|  |...|++++++|+..  .-++++++++.+  +++|+
T Consensus        66 ~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~--~~~~~l~s~g~~--~~v~~  141 (356)
T 2w18_A           66 SLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDE--SEKQVLLKSGNI--KAVLG  141 (356)
T ss_dssp             EEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--------CCEEEEEEEEE--EEEEE
T ss_pred             EEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCcc--ccccEEEeCCCe--EEEEe
Confidence            35666666   6666666666666666666655555444333  344566666555400  006788887744  88887


Q ss_pred             ecCCcccccccccCCCCCceEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC---CCCeEEEeec
Q psy15191         82 YVSEGNYLPYHMRDDSKQLHLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP---RGDYIIAHGF  156 (312)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~  156 (312)
                      +.              ++.++.+++  .|+.|++|++... +..+....     .|...+..++|+|   ++..|++++.
T Consensus       142 l~--------------~g~lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~-----~~~~~v~~l~fs~~~g~~~~LaSgS~  201 (356)
T 2w18_A          142 LT--------------KRRLVSSSGTLSDQQVEVMTFAED-GGGKENQF-----LMPPEETILTFAEVQGMQEALLGTTI  201 (356)
T ss_dssp             ET--------------TTEEEEEESSSTTCEEEEEEECTT-SCEEEEEE-----ECCCSSCEEEEEEEETSTTEEEEEET
T ss_pred             cC--------------CCcEEEecccCCCCcEEEEEECCC-Cceeeeec-----cCCCceeeEEeeccCCCCceEEEecC
Confidence            63              233445533  6999999999542 22233322     5677788899999   7899999999


Q ss_pred             CCeEEE-ecccCceeeeecccC---CceeEEEECCCCCEE------------EEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        157 QGSLHL-DVTTWKQIQTLPCHQ---LTITQLAFSPDDTHL------------VSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       157 ~~~i~~-d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      |+.|++ |+++++.+..+.+|.   ..+.+++|+|+|.++            ++|+.|++|++||..+.+.+..+.... 
T Consensus       202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-  280 (356)
T 2w18_A          202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL-  280 (356)
T ss_dssp             TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-
T ss_pred             CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-
Confidence            999999 999998888887543   357778999999886            567889999999999887665443211 


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee-EEEeccCCCeEEEEe
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY-SLAASHDGTLLASAC  299 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~s  299 (312)
                       ...|...+.+..+  ++.++|+++.|++|+|||+.++.            ++.++.+|...+. .++|+|||++|++|+
T Consensus       281 -p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk------------~l~tL~gH~~~vvs~vafSPDG~~LaSGS  345 (356)
T 2w18_A          281 -PPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ------------CTALLPPVSDQHWSFVKWSGTDSHLLAGQ  345 (356)
T ss_dssp             -CTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS------------EEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred             -cCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc------------EEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence             0013333444444  37899999999999999999874            7888989987665 589999999999996


Q ss_pred             cCCCcccceEEeC
Q psy15191        300 KATKPEHAAIIIW  312 (312)
Q Consensus       300 ~d~~~~dg~i~iW  312 (312)
                      .|++     |+||
T Consensus       346 ~D~T-----IklW  353 (356)
T 2w18_A          346 KDGN-----IFVY  353 (356)
T ss_dssp             TTSC-----EEEE
T ss_pred             CCCc-----EEEe
Confidence            5555     9999

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-32  Score=226.97  Aligned_cols=233  Identities=18%  Similarity=0.240  Sum_probs=182.1

Q ss_pred             CeEEEEeccCCCceEEEEEeCCC---------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEG---------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS   72 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~---------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~   72 (312)
                      |+++..+.+|...|.+++|++++                     ++.+..+.+|...|++++|+++    .++++|++|+
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~~l~s~~   76 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP----KFGTILASCS   76 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG----GGCSEEEEEE
T ss_pred             CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC----CCCCEEEEec
Confidence            45666777888888888866654                     3456678899999999999865    4478999999


Q ss_pred             CCCcEEEeeecCCcc----------cccccccCCCC--CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191         73 LDKTAILWKYVSEGN----------YLPYHMRDDSK--QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY  140 (312)
Q Consensus        73 ~dg~i~vw~~~~~~~----------~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~  140 (312)
                      .||.|++||+.+++.          ..+..+.++++  +.++++++.|+.|++||+...........     ..|...|.
T Consensus        77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~v~  151 (379)
T 3jrp_A           77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-----DAHAIGVN  151 (379)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-----ECCTTCEE
T ss_pred             cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-----cCCCCceE
Confidence            999999999998752          23444555677  78999999999999999988543332222     36888999


Q ss_pred             EEEECC-------------CCCeEEEeecCCeEEE-ecccCc----eeeeecccCCceeEEEECCC---CCEEEEEecCC
Q psy15191        141 GCKFGP-------------RGDYIIAHGFQGSLHL-DVTTWK----QIQTLPCHQLTITQLAFSPD---DTHLVSVSRDR  199 (312)
Q Consensus       141 ~~~~~~-------------~~~~l~~~~~~~~i~~-d~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~  199 (312)
                      +++|+|             ++.++++++.|+.|++ |+++..    ....+.+|...|.+++|+|+   +++|++++.||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg  231 (379)
T 3jrp_A          152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR  231 (379)
T ss_dssp             EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred             EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence            999999             6999999999999999 555433    33456689999999999999   89999999999


Q ss_pred             eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      .|++||+++...........  ...+...|++++|+|++++|++++.||.|++|++..
T Consensus       232 ~i~iwd~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          232 TCIIWTQDNEQGPWKKTLLK--EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             CEEEEEESSTTSCCEEEESS--SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             EEEEEeCCCCCccceeeeec--cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence            99999999764221111111  111677899999999999999999999999999874

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=6.9e-32  Score=236.56  Aligned_cols=261  Identities=19%  Similarity=0.261  Sum_probs=211.8

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCC----ceEEEEccccCc-EEEEEEec--CcCcCCCCceEEEecCCCcEEEeeec
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGG----KVLYTLTNHKSK-VMAVKWVL--NTSLDPEHKDLVSCSLDKTAILWKYV   83 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~----~~~~~~~~h~~~-v~~~~~~~--~~~~~~~~~~l~s~~~dg~i~vw~~~   83 (312)
                      .++++.+....+.  .  ...|+.+++    +....+.+|... |++++|+|  +      +++|++++.||.|++||+.
T Consensus        27 spdg~~l~~~~~~--~--v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~------~~~l~s~~~dg~v~vw~~~   96 (615)
T 1pgu_A           27 DPTTNAIAYPCGK--S--AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG------SQYLCSGDESGKVIVWGWT   96 (615)
T ss_dssp             ETTTTEEEEEETT--E--EEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTT------CCEEEEEETTSEEEEEEEE
T ss_pred             CCCCCEEEEecCC--e--EEEEECCCCCCccccceEEecCCCceEEEEEECcCCC------CCEEEEecCCCEEEEEeCC
Confidence            3456666655432  2  234898888    899999999999 99999999  8      8999999999999999997


Q ss_pred             CC--------cc--------cccccccCCCCCceEEEEeCC----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         84 SE--------GN--------YLPYHMRDDSKQLHLLSCSMD----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        84 ~~--------~~--------~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      ++        ..        ..+..+.+++++.++++++.+    +.|++||...    .     ...+.+|...|.+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~----~-----~~~~~~~~~~v~~~~  167 (615)
T 1pgu_A           97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN----S-----LGEVSGHSQRINACH  167 (615)
T ss_dssp             EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC----E-----EEECCSCSSCEEEEE
T ss_pred             CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC----c-----ceeeecCCccEEEEE
Confidence            54        11        234455668888899999988    7899998432    1     222347889999999


Q ss_pred             ECCCCC-eEEEeecCCeEEE-ecccCceeeeecccCC---ceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        144 FGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLPCHQL---TITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       144 ~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      |+|+++ .+++++.|+.+++ |..+.+....+..|..   .|.+++|+|+ +++|++++.|+.|++||+++.+.+..+..
T Consensus       168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  247 (615)
T 1pgu_A          168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED  247 (615)
T ss_dssp             ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred             ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc
Confidence            999998 7999999999999 8888888888888998   9999999999 99999999999999999998888776621


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeecc----CcceeEEEeccCCC
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH----GYEIYSLAASHDGT  293 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~  293 (312)
                      .   ...|...|.+++|+ ++++|++++.|+.|++||+..+.            .+..+..+    ...+.++.|+ +++
T Consensus       248 ~---~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~-~~~  310 (615)
T 1pgu_A          248 D---QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK------------CVQKWTLDKQQLGNQQVGVVAT-GNG  310 (615)
T ss_dssp             T---TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE------------EEEEEECCTTCGGGCEEEEEEE-ETT
T ss_pred             c---ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc------------EEEEEcCCCCcccCceeEEEeC-CCC
Confidence            0   00188899999999 99999999999999999998763            45556555    4678888885 889


Q ss_pred             eEEEEecCCCcccceEEeC
Q psy15191        294 LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       294 ~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++++++.|+.     |++|
T Consensus       311 ~l~~~~~~g~-----i~~~  324 (615)
T 1pgu_A          311 RIISLSLDGT-----LNFY  324 (615)
T ss_dssp             EEEEEETTSC-----EEEE
T ss_pred             eEEEEECCCC-----EEEE
Confidence            9999965555     8887

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-31  Score=226.17  Aligned_cols=235  Identities=11%  Similarity=0.083  Sum_probs=183.3

Q ss_pred             cccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeec--CCccc----------ccccccCCCCCceEEEEeCCCcE
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYV--SEGNY----------LPYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~--~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      +|.+.|++++|+|+      +++| ++++.||.|++||+.  ++...          .+..+.+++++.+|++++.++.|
T Consensus       100 ~~~~~v~~~~~s~d------~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v  173 (450)
T 2vdu_B          100 PIYSYIRNLRLTSD------ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV  173 (450)
T ss_dssp             CCCCCEEEEEECTT------SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             ccCCceEEEEEcCC------CCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence            34457999999999      8886 999999999999998  65542          23355668888999999999999


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCC---CCeEEEeecCCeEEE-ecccCceeee-ecccCCceeEEEEC
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR---GDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFS  186 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~  186 (312)
                      ++|++.+.+...   .....+.+|...|.+++|+|+   +++|++++.|+.|++ |+++.+.... +.+|...|.+++|+
T Consensus       174 ~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s  250 (450)
T 2vdu_B          174 YSIDINSIPEEK---FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG  250 (450)
T ss_dssp             EEEETTSCCCSS---CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC
T ss_pred             EEEecCCccccc---ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC
Confidence            999998744221   011123467889999999999   999999999999999 7777666665 45899999999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------------------CcccceeeEEEEEcCCCceEEEec-cC
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------------------NGVHKRIIWGVAWSHDSRYFLTIS-RD  247 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------------~~~~~~~v~~~~~~~~~~~l~s~~-~d  247 (312)
                       ++++|++++.|+.|++||+++.+.+..+......                  .......|.+++|+|++++|++++ .|
T Consensus       251 -d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d  329 (450)
T 2vdu_B          251 -KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT  329 (450)
T ss_dssp             -STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC
T ss_pred             -CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC
Confidence             9999999999999999999998887777632100                  001345689999999999999998 89


Q ss_pred             CeEEEEec--CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        248 GVCVVWGL--GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       248 g~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      +.|++|++  .....         +..+..+..| ..|.+++|+|++.++++++
T Consensus       330 ~~i~iw~~~~~~~~~---------l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~  373 (450)
T 2vdu_B          330 KCIIILEMSEKQKGD---------LALKQIITFP-YNVISLSAHNDEFQVTLDN  373 (450)
T ss_dssp             SEEEEEEECSSSTTC---------EEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred             CeEEEEEeccCCCCc---------eeeccEeccC-CceEEEEecCCcEEEEEec
Confidence            99999999  33211         1256677777 8899999999654444443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=8.7e-33  Score=230.36  Aligned_cols=241  Identities=18%  Similarity=0.192  Sum_probs=184.0

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeC-CCCceE-------------------EEE-------------ccccCcEEEE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNG-EGGKVL-------------------YTL-------------TNHKSKVMAV   53 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~-~~~~~~-------------------~~~-------------~~h~~~v~~~   53 (312)
                      ++|+.+.++....+.+|.+.|.+++|++ ++..++                   ..+             .+|...|.++
T Consensus        26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  105 (408)
T 4a11_B           26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV  105 (408)
T ss_dssp             HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE
T ss_pred             eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEE
Confidence            4566677778888899999999999998 542111                   111             2499999999


Q ss_pred             EEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCccee
Q psy15191         54 KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW  123 (312)
Q Consensus        54 ~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  123 (312)
                      +|+|+     ++.+|++++.||.|++||+.+++..          .+.+.+..+++.++++++.++.|++||+++.+.. 
T Consensus       106 ~~~~~-----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-  179 (408)
T 4a11_B          106 QWYPH-----DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS-  179 (408)
T ss_dssp             EECTT-----CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-
T ss_pred             EEccC-----CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-
Confidence            99993     1779999999999999999887652          3344445556779999999999999999874422 


Q ss_pred             eeeeeecccCCCccceeEEEECCCCCe-EEEeecCCeEEE-ecccCc-eeeee---------------cccCCceeEEEE
Q psy15191        124 LETARVGEVGGNTLGFYGCKFGPRGDY-IIAHGFQGSLHL-DVTTWK-QIQTL---------------PCHQLTITQLAF  185 (312)
Q Consensus       124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~~~~-~~~~~---------------~~~~~~v~~~~~  185 (312)
                       ..     +..|...|.+++|+|+++. +++++.||.+++ |+++.. ....+               ..|...|.+++|
T Consensus       180 -~~-----~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  253 (408)
T 4a11_B          180 -HI-----LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF  253 (408)
T ss_dssp             -EE-----ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred             -ee-----ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence             22     2368889999999999985 889999999999 554433 11111               468899999999


Q ss_pred             CCCCCEEEEEecCCeEEEEEccCCCeEEEEecc------------------------------------CC----CCccc
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS------------------------------------DK----TNGVH  225 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~------------------------------------~~----~~~~~  225 (312)
                      +|++++|++++.||.|++||+++.+........                                    ..    ....|
T Consensus       254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~  333 (408)
T 4a11_B          254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH  333 (408)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred             cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence            999999999999999999999875432211100                                    00    00127


Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ...|++++|+|++++|++++.||.|++||+....
T Consensus       334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~  367 (408)
T 4a11_B          334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE  367 (408)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred             CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence            7889999999999999999999999999998874

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=5.4e-32  Score=222.27  Aligned_cols=195  Identities=12%  Similarity=-0.004  Sum_probs=153.1

Q ss_pred             cCcEEEEEEecCcCcCCCCceEE--EecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLV--SCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~--s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      ...+.+++|+|+      |++++  +++.|++|+|||+.+++..       .+..+.++|++.++++++.++ +.+|+..
T Consensus       133 ~~~~~~v~fSpD------g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~  205 (365)
T 4h5i_A          133 DDYTKLVYISRE------GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTV  205 (365)
T ss_dssp             TCCEEEEEECTT------SSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETT
T ss_pred             ccCEEEEEEcCC------CCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEec
Confidence            345888999998      88875  5568999999999887652       345566788999999988655 5566555


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC----eEEE-ecccCce----eeeecccCCceeEEEECCC
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG----SLHL-DVTTWKQ----IQTLPCHQLTITQLAFSPD  188 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~-d~~~~~~----~~~~~~~~~~v~~~~~~~~  188 (312)
                      +++.....     ....|...+.+++|+|+++.+++++.++    .+++ +...+..    ...+.+|...|++++|+||
T Consensus       206 ~~~~~~~~-----~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd  280 (365)
T 4h5i_A          206 TGSCIARK-----TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK  280 (365)
T ss_dssp             TCCEEEEE-----CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred             cCcceeee-----ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence            53322211     2236788899999999999999999887    3454 4444332    2345578999999999999


Q ss_pred             CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |++|++|+.|+.|+|||+++.+.+..+...      |...|++++|+|||++||+|+.|++|+|||+....
T Consensus       281 g~~lasgs~D~~V~iwd~~~~~~~~~~~~g------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~  345 (365)
T 4h5i_A          281 GELAVLASNDNSIALVKLKDLSMSKIFKQA------HSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY  345 (365)
T ss_dssp             SCEEEEEETTSCEEEEETTTTEEEEEETTS------SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred             CCceEEEcCCCEEEEEECCCCcEEEEecCc------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence            999999999999999999988877665322      88999999999999999999999999999997653

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.5e-32  Score=220.71  Aligned_cols=153  Identities=12%  Similarity=0.130  Sum_probs=112.5

Q ss_pred             CeEEE--eecCCeEEE-ecccCc----------------eeeeecccCCceeEEEECCCCCEEEEEecCCe-EEEEEccC
Q psy15191        149 DYIIA--HGFQGSLHL-DVTTWK----------------QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR-WGLYKRQS  208 (312)
Q Consensus       149 ~~l~~--~~~~~~i~~-d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~wd~~~  208 (312)
                      ..+++  |+.+|.|++ |+.+..                ....+.+|...|.+++|+|++++|++++.|++ |++||+++
T Consensus       148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~  227 (355)
T 3vu4_A          148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED  227 (355)
T ss_dssp             TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred             cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            34444  578899999 665543                14567789999999999999999999999998 99999999


Q ss_pred             CCeEEEEe-ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc---------ccccce-eEEee
Q psy15191        209 SGRLSLVA-CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ---------NTLWPE-VQKLY  277 (312)
Q Consensus       209 ~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~-~~~~~  277 (312)
                      .+.+..+. +.      |...|++++|+|++++|++++.|+.|++||+..+.......-         ...|.. ...+.
T Consensus       228 ~~~~~~~~~g~------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (355)
T 3vu4_A          228 GVLVREFRRGL------DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS  301 (355)
T ss_dssp             CCEEEEEECTT------CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred             CcEEEEEEcCC------CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence            98888776 22      677899999999999999999999999999987643221100         001100 01111


Q ss_pred             -ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        278 -GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       278 -~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       .+......++|++++++|++++.     ||.+++|
T Consensus       302 ~~~~~~~~~~a~~~d~~~l~~~~~-----dg~~~~~  332 (355)
T 3vu4_A          302 VDKHVRGCKIAWISESSLVVVWPH-----TRMIETF  332 (355)
T ss_dssp             CCTTCCCCEEEESSSSEEEEEETT-----TTEEEEE
T ss_pred             cCCCCCceEEEEeCCCCEEEEEeC-----CCeEEEE
Confidence             12233477999999999999955     4548776

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.7e-31  Score=217.63  Aligned_cols=211  Identities=17%  Similarity=0.250  Sum_probs=165.9

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------cccccccCCCC--
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------YLPYHMRDDSK--   98 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------~~~~~~~~~~~--   98 (312)
                      +....+.+|...|++++|+|.    .++.+|++|+.||.|++||+..+..                 ..+..+.+.++  
T Consensus        48 ~~~~~~~~~~~~v~~~~~~~~----~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  123 (351)
T 3f3f_A           48 ELSDSWRAHDSSIVAIDWASP----EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL  123 (351)
T ss_dssp             EEEEEEECCSSCEEEEEECCG----GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGG
T ss_pred             eecceeccCCCcEEEEEEcCC----CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCC
Confidence            456777899999999999982    2278999999999999999987631                 12344455677  


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeee----e--ecccCCCccceeEEEECCC---CCeEEEeecCCeEEE-ecccCc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETA----R--VGEVGGNTLGFYGCKFGPR---GDYIIAHGFQGSLHL-DVTTWK  168 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~--~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-d~~~~~  168 (312)
                      +.++++++.|+.|++||+++.+.......    .  ......+...+.+++|+|+   +..+++++.++.+.+ +.....
T Consensus       124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~  203 (351)
T 3f3f_A          124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK  203 (351)
T ss_dssp             CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred             CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence            88999999999999999987553221111    0  1112357778999999997   899999999999977 444444


Q ss_pred             e--eeeecccCCceeEEEECCCC----CEEEEEecCCeEEEEEccCCCe-------------------------------
Q psy15191        169 Q--IQTLPCHQLTITQLAFSPDD----THLVSVSRDRRWGLYKRQSSGR-------------------------------  211 (312)
Q Consensus       169 ~--~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~~-------------------------------  211 (312)
                      .  ...+.+|...|.+++|+|++    ++|++++.||.|++||++....                               
T Consensus       204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (351)
T 3f3f_A          204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSN  283 (351)
T ss_dssp             EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------
T ss_pred             eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccc
Confidence            3  55666899999999999998    8999999999999999987421                               


Q ss_pred             ---------------EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        212 ---------------LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       212 ---------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                                     +..+.       .|...|++++|+|++++|++++.||.|++||+..+.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~  339 (351)
T 3f3f_A          284 TEEKAELQSNLQVELLSEHD-------DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN  339 (351)
T ss_dssp             -------CCSEEEEEEEEEC-------TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred             cceeeeecccccccEEEEEe-------cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence                           11122       177889999999999999999999999999998763

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-32  Score=228.95  Aligned_cols=222  Identities=11%  Similarity=0.093  Sum_probs=172.7

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------cccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------YLPYHMRDDSKQLHLLSCSMDKSIIVWAP  116 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  116 (312)
                      +++|...|++++|+|+      |       .++.+.+|+.+....      -.+..+.++|++..|++++.||.|++||.
T Consensus        48 l~gh~~~v~~V~FsPd------g-------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~  114 (588)
T 2j04_A           48 INCNSKNLFHVKEFPL------E-------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKD  114 (588)
T ss_dssp             CSSBGGGTEEEEEECC------C-------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEET
T ss_pred             ecCCCccEEEEEECCC------C-------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence            4789999999999999      6       577777776553332      24667788999999999999999999995


Q ss_pred             CCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce-------eeee----cccCCceeEEE
Q psy15191        117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-------IQTL----PCHQLTITQLA  184 (312)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~-------~~~~----~~~~~~v~~~~  184 (312)
                      ..    .+.... ....-....+.+++|||+|++|++|+.||.|++ |+.+..+       ...+    .+|...|.+++
T Consensus       115 ~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVa  189 (588)
T 2j04_A          115 NK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIV  189 (588)
T ss_dssp             TE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEE
T ss_pred             Cc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEE
Confidence            43    222211 111011236999999999999999999999999 6666542       3444    57888999999


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeE---EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCC
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRL---SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE  261 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  261 (312)
                      |+|||  +++++.|+.|++||+......   ..+...      |...|.+++|+  +++||+++ ++.|++||+..+   
T Consensus       190 wSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~------h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~---  255 (588)
T 2j04_A          190 WYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA------SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY---  255 (588)
T ss_dssp             EETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC------CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT---
T ss_pred             EcCCc--EEEEeCCCeEEEEECCCCccccceeeeccc------ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC---
Confidence            99999  888999999999999876632   333221      66789999999  68899887 699999999876   


Q ss_pred             cccccccccceeEEee-ccCcceeEEEe--ccCCCeEEEEecCCCcccceEEeC
Q psy15191        262 EDLVQNTLWPEVQKLY-GHGYEIYSLAA--SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~--s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                ....+. +|.+.|.+++|  +|++..|+++     .+||+ ++|
T Consensus       256 ----------~~~~~~~gh~~~V~~va~~~s~d~~~La~a-----~edG~-klw  293 (588)
T 2j04_A          256 ----------SISSLKTGSLENFHIIPLNHEKESTILLMS-----NKTSY-KVL  293 (588)
T ss_dssp             ----------EEEEEECSCCSCCCEEEETTCSSCEEEEEC-----SSCEE-EEE
T ss_pred             ----------eEEEEEcCCCceEEEEEeeeCCCCCEEEEE-----cCCCC-EEE
Confidence                      342333 89999999999  9999999999     78888 776

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-32  Score=223.07  Aligned_cols=222  Identities=11%  Similarity=0.068  Sum_probs=166.9

Q ss_pred             CCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCc-------ceeeeeeeec
Q psy15191         64 EHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT-------GLWLETARVG  130 (312)
Q Consensus        64 ~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~  130 (312)
                      ++.+|++|+.||.|++||+.+++..      .+....+++.   +++++.|++|++|+.....       ...+...   
T Consensus        47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~---  120 (343)
T 3lrv_A           47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI---  120 (343)
T ss_dssp             EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE---
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe---
Confidence            3789999999999999999988753      2333334444   9999999999999877421       1111111   


Q ss_pred             ccCCCccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191        131 EVGGNTLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKR  206 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~  206 (312)
                       ..+|...|.+++|+|  +++++++++.||.+++ |+++.+...... .+...+.+++|+|++.+|++|+.||.|++||+
T Consensus       121 -~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~  199 (343)
T 3lrv_A          121 -EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL  199 (343)
T ss_dssp             -ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred             -ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence             125667899999999  9999999999999999 777777655543 45668999999999999999999999999999


Q ss_pred             cCCCeE-EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee-
Q psy15191        207 QSSGRL-SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY-  284 (312)
Q Consensus       207 ~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-  284 (312)
                      ++.+.. ..+...      |..+|++++|+|++.+|++++ |+.|++||++......         .+..+..|...+. 
T Consensus       200 ~~~~~~~~~~~~~------h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~~  263 (343)
T 3lrv_A          200 SSPDQASSRFPVD------EEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL---------AYPTYTIPEFKTGT  263 (343)
T ss_dssp             SCTTSCCEECCCC------TTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB---------SSCCCBC-----CC
T ss_pred             CCCCCCccEEecc------CCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce---------eecccccccccccc
Confidence            988766 444431      778999999999999999999 4599999998874321         1222223444444 


Q ss_pred             -EEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        285 -SLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       285 -~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                       +++|+|+|++|++++.    .|+.|+||
T Consensus       264 ~~~~~~~~g~~l~~~s~----~d~~i~v~  288 (343)
T 3lrv_A          264 VTYDIDDSGKNMIAYSN----ESNSLTIY  288 (343)
T ss_dssp             EEEEECTTSSEEEEEET----TTTEEEEE
T ss_pred             eEEEECCCCCEEEEecC----CCCcEEEE
Confidence             6999999999999964    24459987

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=7.9e-31  Score=219.63  Aligned_cols=234  Identities=16%  Similarity=0.215  Sum_probs=190.7

Q ss_pred             ceEeCCCCeEEEEec--cCCCceEEEEEeCC-------------------CCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191          7 DVVNGEGGKVLYTLT--NHKSKVMAVKWNGE-------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~--~h~~~v~~~~w~~~-------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      +||+..+|+.+..+.  +|...|++++|+++                   +++++..+.+|...|.++.+++        
T Consensus       128 ~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~--------  199 (420)
T 4gga_A          128 YLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS--------  199 (420)
T ss_dssp             EEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--------
T ss_pred             EEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC--------
Confidence            589999999877664  67888999996554                   4778889999999999988754        


Q ss_pred             ceEEEecCCCcEEEeeecCCcc---------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGN---------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~---------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      .+|++|+.|+.+++||......         ..+....+.+++.++++++.|+.+++|+..+.+....   .......|.
T Consensus       200 ~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~---~~~~~~~~~  276 (420)
T 4gga_A          200 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV---PLQTFTQHQ  276 (420)
T ss_dssp             TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC---CSEEECCCS
T ss_pred             CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce---eeeeecccC
Confidence            4999999999999999876543         1334445577888999999999999999987543221   112234678


Q ss_pred             cceeEEEECCCCCe-EEE--eecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cCCeEEEEEccCCC
Q psy15191        137 LGFYGCKFGPRGDY-IIA--HGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSG  210 (312)
Q Consensus       137 ~~v~~~~~~~~~~~-l~~--~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~  210 (312)
                      ..|.+++|+|.+.. +++  |+.|+.|++ |+.++.....+. +...+.++.|+|+++.+++++  .|+.|++||+.+.+
T Consensus       277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~  355 (420)
T 4gga_A          277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA  355 (420)
T ss_dssp             SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred             CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence            89999999997654 444  457999999 888888777776 456789999999999988765  78999999999999


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .+..+.+       |...|++++|+|+|++|++|+.|++|+|||+....
T Consensus       356 ~v~~l~g-------H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          356 KVAELKG-------HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             EEEEECC-------CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             EEEEEcC-------CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            9888876       88999999999999999999999999999997653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.9e-31  Score=222.25  Aligned_cols=236  Identities=13%  Similarity=0.089  Sum_probs=184.1

Q ss_pred             EEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc------------cccccccCCC-CCceEEEEeCCCcEEEEc
Q psy15191         50 VMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDS-KQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~-~~~~l~~~~~d~~i~i~d  115 (312)
                      ...++++|+      .. ++++++.||.|+||++.....            ..+..+.+++ ++.+|++++.||.|++||
T Consensus        37 ~~~~~~~~~------~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~  110 (402)
T 2aq5_A           37 SGFCAVNPK------FMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE  110 (402)
T ss_dssp             SCSEEECSS------EEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred             CCcEEECCC------eEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEE
Confidence            445777776      33 344678999999999865321            1344455677 788999999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCceeeee--cccCCceeEEEECCCCCE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQTL--PCHQLTITQLAFSPDDTH  191 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~  191 (312)
                      +.+.............+.+|...|.+++|+|++ ++|++++.|+.|++ |+++.+....+  ..|...|.+++|+|++++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  190 (402)
T 2aq5_A          111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL  190 (402)
T ss_dssp             CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred             ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence            987532211111223344788999999999998 69999999999999 88888888888  789999999999999999


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee-eEEEEEcCCCceEEEe---ccCCeEEEEecCCCCCCcccccc
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI-IWGVAWSHDSRYFLTI---SRDGVCVVWGLGEPPTEEDLVQN  267 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~  267 (312)
                      |++++.|+.|++||+++.+.+..+...      |... +.+++|+|++++|++|   +.|+.|++||+.....       
T Consensus       191 l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~-------  257 (402)
T 2aq5_A          191 ICTSCRDKRVRVIEPRKGTVVAEKDRP------HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE-------  257 (402)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECS------SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS-------
T ss_pred             EEEEecCCcEEEEeCCCCceeeeeccC------CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC-------
Confidence            999999999999999988777766321      4443 8899999999999999   8999999999987642       


Q ss_pred             cccceeEE-eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        268 TLWPEVQK-LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       268 ~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                          ++.. ...|...+.+++|+|++++|++++    +.||.|++|
T Consensus       258 ----~~~~~~~~~~~~v~~~~~s~~~~~l~~~g----~~dg~i~i~  295 (402)
T 2aq5_A          258 ----PLSLQELDTSSGVLLPFFDPDTNIVYLCG----KGDSSIRYF  295 (402)
T ss_dssp             ----CSEEEECCCCSSCEEEEEETTTTEEEEEE----TTCSCEEEE
T ss_pred             ----CceEEeccCCCceeEEEEcCCCCEEEEEE----cCCCeEEEE
Confidence                1222 225677899999999999997553    345559998

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=9.9e-32  Score=223.01  Aligned_cols=217  Identities=14%  Similarity=0.106  Sum_probs=149.4

Q ss_pred             CceEEEecCCCcEEEeeecCCccc-------------ccccccCC--------CCCceEEEEeCCCcEEEEcCCCCccee
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDD--------SKQLHLLSCSMDKSIIVWAPDPTTGLW  123 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~  123 (312)
                      +.+|++++.|++|+|||.+.++..             .+..+.+.        .++.+|++++.|++|++||+.+...  
T Consensus       101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~--  178 (393)
T 4gq1_A          101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP--  178 (393)
T ss_dssp             EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE--
T ss_pred             CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce--
Confidence            678999999999999999876531             12222222        2677999999999999999976432  


Q ss_pred             eeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeee-------------------------ccc
Q psy15191        124 LETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTL-------------------------PCH  176 (312)
Q Consensus       124 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~-------------------------~~~  176 (312)
                      ....     ..|...+.+++|+|++. +|++++.|+.|++ |+++.+.....                         .+|
T Consensus       179 ~~~~-----~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  253 (393)
T 4gq1_A          179 ILAG-----YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI  253 (393)
T ss_dssp             EEEE-----EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred             eeee-----cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence            2222     25678899999999875 7999999999999 66554332211                         257


Q ss_pred             CCceeEEEEC-CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc-----------ccceeeEEEEEcC--CCceEE
Q psy15191        177 QLTITQLAFS-PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG-----------VHKRIIWGVAWSH--DSRYFL  242 (312)
Q Consensus       177 ~~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~--~~~~l~  242 (312)
                      ...+.++.|+ |+++.|++++.|+.+++||+........+........           ..........|+|  ++.+++
T Consensus       254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (393)
T 4gq1_A          254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT  333 (393)
T ss_dssp             SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred             cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence            7888999987 7999999999999999999987655444332111000           0111112233443  445778


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      +|+.||.|++||+..+.            ....+.+|..+|++++|+|||++||+++.
T Consensus       334 sgs~Dg~V~lwd~~~~~------------~~~~~~~~~~~V~svafspdG~~LA~as~  379 (393)
T 4gq1_A          334 AHSQHGLIQLINTYEKD------------SNSIPIQLGMPIVDFCWHQDGSHLAIATE  379 (393)
T ss_dssp             EETTTTEEEEEETTCTT------------CCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred             EECCCCEEEEEECCCCc------------EEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence            88999999999998774            45666788999999999999999999943

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.1e-31  Score=219.04  Aligned_cols=233  Identities=18%  Similarity=0.205  Sum_probs=183.7

Q ss_pred             EEEEccccCcE--EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCC
Q psy15191         40 LYTLTNHKSKV--MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        40 ~~~~~~h~~~v--~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      +....+|...+  .++.|++        ..+++++.|+.|++||+.+++..         .+..+.+++++.+|++++.|
T Consensus        84 ~~~~~~~~~~~~~~~~~~s~--------~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d  155 (401)
T 4aez_A           84 VLDAPGIIDDYYLNLLDWSN--------LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN  155 (401)
T ss_dssp             EEECTTCCCCTTCBCEEECT--------TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred             eeeCCCCcCCceEEEEeecC--------CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC
Confidence            33444666554  3455544        36888999999999999887652         34455667888899999999


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc-cCceeeeecccCCceeEEEEC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT-TWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~-~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      |.|++||+.+.+.  ...     +.+|...|.+++|  +++.+++++.||.|++ |++ .......+.+|...|.+++|+
T Consensus       156 g~i~iwd~~~~~~--~~~-----~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~  226 (401)
T 4aez_A          156 GLVDIYDVESQTK--LRT-----MAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR  226 (401)
T ss_dssp             SCEEEEETTTCCE--EEE-----ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred             CeEEEEECcCCeE--EEE-----ecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence            9999999987442  222     2378889999999  5679999999999999 766 344556677899999999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEec--cCCeEEEEecCCCCCCcc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTIS--RDGVCVVWGLGEPPTEED  263 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~  263 (312)
                      |++++|++++.|+.|++||+++......+..       |...|.+++|+|++. ++++++  .|+.|++||+.++.    
T Consensus       227 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~----  295 (401)
T 4aez_A          227 SDGLQLASGGNDNVVQIWDARSSIPKFTKTN-------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA----  295 (401)
T ss_dssp             TTSSEEEEEETTSCEEEEETTCSSEEEEECC-------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC----
T ss_pred             CCCCEEEEEeCCCeEEEccCCCCCccEEecC-------CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC----
Confidence            9999999999999999999998877776654       788899999999775 555544  79999999998763    


Q ss_pred             cccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        264 LVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                              .+..+. +...|.+++|+|++++|++++.   ..||.|++|
T Consensus       296 --------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g---~~dg~i~v~  332 (401)
T 4aez_A          296 --------RVNTVD-AGSQVTSLIWSPHSKEIMSTHG---FPDNNLSIW  332 (401)
T ss_dssp             --------EEEEEE-CSSCEEEEEECSSSSEEEEEEC---TTTCEEEEE
T ss_pred             --------EEEEEe-CCCcEEEEEECCCCCeEEEEee---cCCCcEEEE
Confidence                    444453 6778999999999999999531   356669998

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-32  Score=241.27  Aligned_cols=211  Identities=19%  Similarity=0.240  Sum_probs=170.3

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC--CceEEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK--QLHLLS  104 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~--~~~l~~  104 (312)
                      ++.+..+.+|.++|++++|+|+    .++++|++|+.||.|++||+.++..          ..+..+.++++  +..+++
T Consensus        43 ~~~~~~l~~h~~~V~~l~~s~~----~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s  118 (753)
T 3jro_A           43 HKLIDTLTGHEGPVWRVDWAHP----KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV  118 (753)
T ss_dssp             EEEEEEECCCSSCEEEEEECCT----TSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred             CccceeccCCcCceEEEEecCC----CCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE
Confidence            4567788899999999999886    5578999999999999999998752          23445556777  889999


Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-------------CCCeEEEeecCCeEEE-ecccC---
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-------------RGDYIIAHGFQGSLHL-DVTTW---  167 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~~~i~~-d~~~~---  167 (312)
                      ++.||.|++||+++.........     .+|...|.+++|+|             +++.+++|+.||.|++ |+++.   
T Consensus       119 gs~dg~I~vwdl~~~~~~~~~~~-----~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~  193 (753)
T 3jro_A          119 ASSDGKVSVVEFKENGTTSPIII-----DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT  193 (753)
T ss_dssp             EETTSEEEEEECCSSSCCCCEEE-----ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE
T ss_pred             EeCCCcEEEEEeecCCCcceeEe-----ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc
Confidence            99999999999987543322222     36888999999999             5899999999999999 66554   


Q ss_pred             -ceeeeecccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        168 -KQIQTLPCHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       168 -~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                       .....+.+|...|.+++|+|+   +++|++++.||.|++||+++.........  .....|...|++++|+|++++|++
T Consensus       194 ~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~~~~~~~~~v~~l~~spdg~~l~s  271 (753)
T 3jro_A          194 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL--LKEEKFPDVLWRASWSLSGNVLAL  271 (753)
T ss_dssp             EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCB--SSSSCCSSCCCCEEECTTTCCEEE
T ss_pred             ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEE--eccCCCCCceEEEEEcCCCCEEEE
Confidence             444566689999999999999   89999999999999999987642211111  111227788999999999999999


Q ss_pred             eccCCeEEEEecCCC
Q psy15191        244 ISRDGVCVVWGLGEP  258 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~  258 (312)
                      ++.||.|++|++...
T Consensus       272 ~s~Dg~I~vwd~~~~  286 (753)
T 3jro_A          272 SGGDNKVTLWKENLE  286 (753)
T ss_dssp             ECSSSCEECCBCCSS
T ss_pred             EcCCCEEEEEecCCC
Confidence            999999999999853

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.3e-31  Score=222.19  Aligned_cols=230  Identities=13%  Similarity=0.136  Sum_probs=183.4

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc---cc------------------------------------
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG---NY------------------------------------   88 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~---~~------------------------------------   88 (312)
                      .++.+++|+|+      |++|+++ .++.|++||+.+++   ..                                    
T Consensus         5 ~p~~~v~~s~d------g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (450)
T 2vdu_B            5 HPLQNLLTSRD------GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLK   77 (450)
T ss_dssp             CCCCEEEECSS------SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------
T ss_pred             ccEEEEEecCC------CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccc
Confidence            57889999999      8866655 57899999998887   21                                    


Q ss_pred             --------------------------ccccccCCCCCceE-EEEeCCCcEEEEcCC--CCcceeeeeeeecccCCCccce
Q psy15191         89 --------------------------LPYHMRDDSKQLHL-LSCSMDKSIIVWAPD--PTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        89 --------------------------~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                                                .+..+.+++++.+| ++++.|+.|++||+.  +++.  ...+..   ..+...|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~---~~~~~~v  152 (450)
T 2vdu_B           78 SNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV--LKLRKR---FCFSKRP  152 (450)
T ss_dssp             ----------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC--EEEEEE---EECSSCE
T ss_pred             cCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce--eeeeec---ccCCCCc
Confidence                                      24455668888886 889999999999998  5332  222221   1356779


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-ecccCceee----eecccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCe
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ----TLPCHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      .+++|+|++++|++++.+|.+++ ++.+.....    .+.+|...|.+++|+|+   +++|++++.|+.|++||+++...
T Consensus       153 ~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~  232 (450)
T 2vdu_B          153 NAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI  232 (450)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred             eEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence            99999999999999999999998 766665443    56689999999999999   99999999999999999998877


Q ss_pred             EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee--------------
Q psy15191        212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY--------------  277 (312)
Q Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--------------  277 (312)
                      +..+...      |...|.+++|+ ++++|++++.|+.|++||+.++.            ++..+.              
T Consensus       233 ~~~~~~~------h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~------------~~~~~~~~~~~~~~~~~~~~  293 (450)
T 2vdu_B          233 VDKWLFG------HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK------------NLSTFDYNSLIKPYLNDQHL  293 (450)
T ss_dssp             EEEECCC------CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC------------EEEEEECHHHHGGGCCTTSB
T ss_pred             eeeeecC------CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc------------Eeeeecchhhhhhhhhhccc
Confidence            6653321      88899999999 99999999999999999998874            233332              


Q ss_pred             -----------ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        278 -----------GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       278 -----------~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                 .....|.+++|+|++++|++++    ..|+.|+||
T Consensus       294 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~----~~d~~i~iw  335 (450)
T 2vdu_B          294 APPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV----EATKCIIIL  335 (450)
T ss_dssp             C----------CBCCCEEEEEECSSSSEEEEEE----TTCSEEEEE
T ss_pred             ccccccccccccceEEEEEEEEeCCCCEEEEEE----CCCCeEEEE
Confidence                       2345789999999999999996    245569998

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-31  Score=239.85  Aligned_cols=242  Identities=12%  Similarity=0.058  Sum_probs=183.5

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      ..+|...|++++|+|+      +++||+|+.||+|+||+....+..       .+..+.+++ +.+|++++.|++|++||
T Consensus        13 ~~gh~~~V~~lafspd------g~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd   85 (902)
T 2oaj_A           13 KYGMSSKPIAAAFDFT------QNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLS   85 (902)
T ss_dssp             EEECSSCEEEEEEETT------TTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEE
T ss_pred             ccCCCCCcEEEEECCC------CCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEE
Confidence            3489999999999999      999999999999999998765531       234445556 66899999999999999


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee-----------eeecccCCceeEE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI-----------QTLPCHQLTITQL  183 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~-----------~~~~~~~~~v~~~  183 (312)
                      +++++.  +....      +...|.+++|+|+++++++|+.||.|++ |+++.++.           ....+|.+.|.++
T Consensus        86 ~~~~~~--~~~~~------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl  157 (902)
T 2oaj_A           86 LYSQKV--LTTVF------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI  157 (902)
T ss_dssp             TTTCSE--EEEEE------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred             CCCCcE--EEEEc------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence            998543  22222      4467999999999999999999999999 66655543           2235688999999


Q ss_pred             EECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCC-----------CCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191        184 AFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK-----------TNGVHKRIIWGVAWSHDSRYFLTISRDGVCV  251 (312)
Q Consensus       184 ~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  251 (312)
                      +|+|+ +..|++++.|+.| +||+++.+....+.....           ....|...|++++|+|+|++|++++.||.|+
T Consensus       158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~  236 (902)
T 2oaj_A          158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV  236 (902)
T ss_dssp             EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred             EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence            99995 5789999999999 999998877766654210           0011457899999999999999999999999


Q ss_pred             EEecCCCCCCcccccccccceeEE--e---e-------------ccCcceeEEEec----cCC-CeEEEEecCCCcccce
Q psy15191        252 VWGLGEPPTEEDLVQNTLWPEVQK--L---Y-------------GHGYEIYSLAAS----HDG-TLLASACKATKPEHAA  308 (312)
Q Consensus       252 iwd~~~~~~~~~~~~~~~~~~~~~--~---~-------------~~~~~v~~~~~s----~~~-~~l~s~s~d~~~~dg~  308 (312)
                      +||+.++..            +..  +   .             .|...|++++|+    |++ .+|++|+.|.......
T Consensus       237 lWd~~~g~~------------~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~  304 (902)
T 2oaj_A          237 FWDANSGHM------------IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS  304 (902)
T ss_dssp             EEETTTCCE------------EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred             EEECCCCcE------------EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence            999987632            211  1   1             135579999996    443 5777776653212234


Q ss_pred             EEeC
Q psy15191        309 IIIW  312 (312)
Q Consensus       309 i~iW  312 (312)
                      |++|
T Consensus       305 v~~~  308 (902)
T 2oaj_A          305 LTMI  308 (902)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5554

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-31  Score=223.98  Aligned_cols=260  Identities=12%  Similarity=-0.002  Sum_probs=191.2

Q ss_pred             eccCCCceEEEEEeCCC---------CceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-----
Q psy15191         20 LTNHKSKVMAVKWNGEG---------GKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-----   84 (312)
Q Consensus        20 ~~~h~~~v~~~~w~~~~---------~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-----   84 (312)
                      +.+|...|++++++|++         ++....+. .|...|.+++|+|+      |++||+++.||.|++||.+.     
T Consensus        48 l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPd------G~~LAs~s~dg~V~iwd~~~~l~~l  121 (588)
T 2j04_A           48 INCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPI------DDWMAVLSNNGNVSVFKDNKMLTNL  121 (588)
T ss_dssp             CSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSS------SSCEEEEETTSCEEEEETTEEEEEC
T ss_pred             ecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCC------CCEEEEEeCCCcEEEEeCCceeeec
Confidence            47899999999988765         22122233 56788999999999      99999999999999999321     


Q ss_pred             -Ccc----cccccccCCCCCceEEEEeCCCcEEEEcCCCCcce-----eeeeeeecccCCCccceeEEEECCCCCeEEEe
Q psy15191         85 -EGN----YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL-----WLETARVGEVGGNTLGFYGCKFGPRGDYIIAH  154 (312)
Q Consensus        85 -~~~----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  154 (312)
                       ...    ..+..+.++|++.+|++|+.||+|++||+.++...     .+.++. ....+|...|.+++|+|+|  ++++
T Consensus       122 ~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~-~~~~gh~~~V~sVawSPdg--Laas  198 (588)
T 2j04_A          122 DSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIR-LSDAGSKDWVTHIVWYEDV--LVAA  198 (588)
T ss_dssp             CCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEE-CSCTTCCCCEEEEEEETTE--EEEE
T ss_pred             cCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeee-cccccccccEEEEEEcCCc--EEEE
Confidence             121    13556778999999999999999999999885320     122221 1124678899999999999  8888


Q ss_pred             ecCCeEEE-ecccCcee---eee-cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191        155 GFQGSLHL-DVTTWKQI---QTL-PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII  229 (312)
Q Consensus       155 ~~~~~i~~-d~~~~~~~---~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v  229 (312)
                      +.|+.+++ |+.+....   ..+ .+|...|.+++|+  ++.|++++ ++.|++||+.+.+......+       |...|
T Consensus       199 s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g-------h~~~V  268 (588)
T 2j04_A          199 LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG-------SLENF  268 (588)
T ss_dssp             ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS-------CCSCC
T ss_pred             eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC-------CCceE
Confidence            99999999 55444421   234 3788899999999  68888887 79999999986655333323       88889


Q ss_pred             EEEEE--cCCCceEEEeccCCeEEEEecCCC-----CCCcccc--cccccc----eeEEeeccCcceeEEEeccCCCeEE
Q psy15191        230 WGVAW--SHDSRYFLTISRDGVCVVWGLGEP-----PTEEDLV--QNTLWP----EVQKLYGHGYEIYSLAASHDGTLLA  296 (312)
Q Consensus       230 ~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~--~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~  296 (312)
                      ..++|  +|++..|+++++||+ ++|....-     .......  ....|.    .+..+.+ ...|++++|||||+.+|
T Consensus       269 ~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA  346 (588)
T 2j04_A          269 HIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIA  346 (588)
T ss_dssp             CEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEE
T ss_pred             EEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEE
Confidence            99999  999999999999999 99987421     1000000  011232    2333333 56799999999999999


Q ss_pred             EEec
Q psy15191        297 SACK  300 (312)
Q Consensus       297 s~s~  300 (312)
                      +++.
T Consensus       347 ~~~~  350 (588)
T 2j04_A          347 IVYD  350 (588)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9975

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=7.3e-30  Score=214.77  Aligned_cols=222  Identities=19%  Similarity=0.291  Sum_probs=183.3

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      ...+|...|.+++|  +      +++|++|+.||.|++||+.+++..        .+..+.+  ++.++++++.||.|++
T Consensus       128 ~~~~~~~~v~~~~~--d------~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~v  197 (435)
T 1p22_A          128 CRSETSKGVYCLQY--D------DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRV  197 (435)
T ss_dssp             CCCSSCCCEEEEEC--C------SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEE
T ss_pred             cccCCCCcEEEEEE--C------CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEE
Confidence            34467778999887  4      679999999999999999887652        2222333  5669999999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee---eeecccCCceeEEEECCCC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI---QTLPCHQLTITQLAFSPDD  189 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~---~~~~~~~~~v~~~~~~~~~  189 (312)
                      ||+.+++  ....     +.+|...|.+++|++  ..+++++.||.|++ |+.+....   ..+.+|...|.+++|  ++
T Consensus       198 wd~~~~~--~~~~-----~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~  266 (435)
T 1p22_A          198 WDVNTGE--MLNT-----LIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD  266 (435)
T ss_dssp             EESSSCC--EEEE-----ECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET
T ss_pred             EECCCCc--EEEE-----EcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC
Confidence            9998854  2222     237888999999974  58999999999999 66655544   456689999999999  78


Q ss_pred             CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccc
Q psy15191        190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL  269 (312)
Q Consensus       190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  269 (312)
                      +++++++.||.|++||+++.+.+..+..       |...|.++++  ++++|++|+.||.|++||+.++.          
T Consensus       267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~----------  327 (435)
T 1p22_A          267 KYIVSASGDRTIKVWNTSTCEFVRTLNG-------HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA----------  327 (435)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC----------
T ss_pred             CEEEEEeCCCeEEEEECCcCcEEEEEcC-------CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC----------
Confidence            8999999999999999999988887775       7788999998  46899999999999999998763          


Q ss_pred             cceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        270 WPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       270 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                        ++..+.+|...|.+++|  ++.+|++|+.|+.     |++|
T Consensus       328 --~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-----i~vw  361 (435)
T 1p22_A          328 --CLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-----IKVW  361 (435)
T ss_dssp             --EEEEECCCSSCEEEEEC--CSSEEEEEETTSC-----EEEE
T ss_pred             --EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-----EEEE
Confidence              67888999999999999  7889999965555     9998

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.98  E-value=2.4e-30  Score=210.95  Aligned_cols=234  Identities=9%  Similarity=0.037  Sum_probs=174.3

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec---------CCcc---------cccccc
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV---------SEGN---------YLPYHM   93 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~---------~~~~---------~~~~~~   93 (312)
                      |+..+++.+..+.  ...|.++.|+|.         +++++.|++|++|+..         +++.         ..+..+
T Consensus        63 wd~~~~~~~~~~~--~~~v~~~~~~~~---------~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  131 (343)
T 3lrv_A           63 TQLKDSKTITTIT--TPNPRTGGEHPA---------IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYM  131 (343)
T ss_dssp             EEESSSSCEEEEE--EECCCTTCCCCS---------EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEE
T ss_pred             EECCCCcEEEEEe--cCCceeeeeCCc---------eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEE
Confidence            9999998888887  456666666553         9999999999999765         3321         124556


Q ss_pred             cCCC--CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee
Q psy15191         94 RDDS--KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI  170 (312)
Q Consensus        94 ~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~  170 (312)
                      .+++  ++.++++++.|+.|++||+++.+..  ....    ..+...+.+++|+|++.+|++|+.||.|++ |+++.+..
T Consensus       132 ~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~--~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~  205 (343)
T 3lrv_A          132 YGHNEVNTEYFIWADNRGTIGFQSYEDDSQY--IVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA  205 (343)
T ss_dssp             ECCC---CCEEEEEETTCCEEEEESSSSCEE--EEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred             EcCCCCCCCEEEEEeCCCcEEEEECCCCcEE--EEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence            6677  8889999999999999999985532  1111    235557999999999999999999999999 88887776


Q ss_pred             -eeecc-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee--EEEEEcCCCceEEEecc
Q psy15191        171 -QTLPC-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII--WGVAWSHDSRYFLTISR  246 (312)
Q Consensus       171 -~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~  246 (312)
                       ..+.. |...|.+++|+|++.+|++++ |+.|++||+++.+....+.....    +...+  .+++|+|++++|++++.
T Consensus       206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~l~~~s~  280 (343)
T 3lrv_A          206 SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTI----PEFKTGTVTYDIDDSGKNMIAYSN  280 (343)
T ss_dssp             CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC---------CCEEEEECTTSSEEEEEET
T ss_pred             ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccc----ccccccceEEEECCCCCEEEEecC
Confidence             66776 999999999999999999999 55999999998765543332111    22223  46999999999999988


Q ss_pred             -CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc---CCCeEEEEecCCC
Q psy15191        247 -DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH---DGTLLASACKATK  303 (312)
Q Consensus       247 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~s~d~~  303 (312)
                       |+.|++|++.....        .|..        .++..++|++   +...|++++.|+.
T Consensus       281 ~d~~i~v~~~~~~~~--------~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~  325 (343)
T 3lrv_A          281 ESNSLTIYKFDKKTK--------NWTK--------DEESALCLQSDTADFTDMDVVCGDGG  325 (343)
T ss_dssp             TTTEEEEEEECTTTC--------SEEE--------EEEEECCC----CCCCEEEEEEETTE
T ss_pred             CCCcEEEEEEccccc--------ceEe--------cCceeEecCccccccceeEEEecCCc
Confidence             99999999976532        1222        4567777877   7778888855544

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.98  E-value=6.7e-29  Score=200.11  Aligned_cols=233  Identities=16%  Similarity=0.212  Sum_probs=186.1

Q ss_pred             ceEeCCCCeEEEEec--cCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191          7 DVVNGEGGKVLYTLT--NHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~--~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      +||+..+|+.+.++.  +|...|.+++                   |+..+++++..+.+|...+.++.+.        +
T Consensus        48 ~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--------~  119 (318)
T 4ggc_A           48 YLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--------S  119 (318)
T ss_dssp             EEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--------T
T ss_pred             EEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--------C
Confidence            689999999888765  6788899998                   5555578888999999988877654        4


Q ss_pred             ceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      ..+++++.++.+++|+.......         .+......+.+.++++++.|+.|++||+++.+.....   ......+.
T Consensus       120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~  196 (318)
T 4ggc_A          120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP---LQTFTQHQ  196 (318)
T ss_dssp             TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCC---SEEECCCC
T ss_pred             CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccc---eeeecccC
Confidence            58999999999999998776441         2334445677889999999999999999875432211   11223567


Q ss_pred             cceeEEEECCCCCeE---EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cCCeEEEEEccCCC
Q psy15191        137 LGFYGCKFGPRGDYI---IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSG  210 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l---~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~  210 (312)
                      ..+.+++++|.+..+   ++++.++.|++ |.......... .+...+..+.|+|++..+++++  .|+.|++||+++.+
T Consensus       197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~  275 (318)
T 4ggc_A          197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA  275 (318)
T ss_dssp             SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred             CceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc
Confidence            789999999977654   35667899999 66655555444 4778899999999999887765  79999999999999


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      .+..+.+       |...|++++|+|++++||+|+.||.|+|||+.+.
T Consensus       276 ~~~~l~g-------H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          276 KVAELKG-------HTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             EEEEECC-------CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             EEEEEcC-------CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            9888876       8899999999999999999999999999998764

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=4.1e-28  Score=201.28  Aligned_cols=240  Identities=11%  Similarity=0.091  Sum_probs=188.7

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccc-------ccccccCCCCCceE
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHL  102 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l  102 (312)
                      .|+.++++.+..+..|. .+.+++|+|+      ++++ ++++.|+.|++||+.+++..       .+....+++++.++
T Consensus        16 v~d~~~~~~~~~~~~~~-~~~~~~~s~d------g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l   88 (391)
T 1l0q_A           16 VIDVTSNKVTATIPVGS-NPMGAVISPD------GTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQV   88 (391)
T ss_dssp             EEETTTTEEEEEEECSS-SEEEEEECTT------SSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred             EEECCCCeEEEEeecCC-CcceEEECCC------CCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEE
Confidence            39999999999998775 5899999999      8766 78889999999999887663       23345567777777


Q ss_pred             E-EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191        103 L-SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       103 ~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      + +++.++.|++||+.+.+.  .....      +...+.+++|+|+++.+ ++++.++.|++ |+.+.+....+..+ ..
T Consensus        89 ~~~~~~~~~v~v~d~~~~~~--~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~  159 (391)
T 1l0q_A           89 YVTNMASSTLSVIDTTSNTV--AGTVK------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RS  159 (391)
T ss_dssp             EEEETTTTEEEEEETTTTEE--EEEEE------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SS
T ss_pred             EEEECCCCEEEEEECCCCeE--EEEEe------CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CC
Confidence            5 555679999999998543  22222      23457999999999987 67778999999 88888777777644 55


Q ss_pred             eeEEEECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec---cCCeEEEEec
Q psy15191        180 ITQLAFSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGL  255 (312)
Q Consensus       180 v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~  255 (312)
                      +..++|+|+++++ ++++.++.|++||+++.+....+.        +...+.+++|+|++++|++++   .++.|++||+
T Consensus       160 ~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~  231 (391)
T 1l0q_A          160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--------VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT  231 (391)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred             cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--------cCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence            7999999999987 567788999999999887666655        455788999999999999887   6899999999


Q ss_pred             CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE-EEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL-ASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~s~d~~~~dg~i~iW  312 (312)
                      ..+.            .+..+..|. .+.+++|+|+|++| +++     +.|+.|++|
T Consensus       232 ~~~~------------~~~~~~~~~-~~~~~~~s~dg~~l~~s~-----~~d~~v~v~  271 (391)
T 1l0q_A          232 GTNK------------ITARIPVGP-DPAGIAVTPDGKKVYVAL-----SFXNTVSVI  271 (391)
T ss_dssp             TTTE------------EEEEEECCS-SEEEEEECTTSSEEEEEE-----TTTTEEEEE
T ss_pred             CCCe------------EEEEEecCC-CccEEEEccCCCEEEEEc-----CCCCEEEEE
Confidence            8762            455566554 47899999999877 566     455669987

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.97  E-value=3.5e-28  Score=204.35  Aligned_cols=241  Identities=13%  Similarity=0.033  Sum_probs=187.1

Q ss_pred             EeCCCCceEE-----EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCC
Q psy15191         32 WNGEGGKVLY-----TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSK   98 (312)
Q Consensus        32 w~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~   98 (312)
                      |+..+++.+.     .+.+|...|.+++|+|+      +.++++++.|+.|++||+.+++..        .+....++++
T Consensus       149 ~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  222 (433)
T 3bws_A          149 LDINSGQTVRLSPPEKYKKKLGFVETISIPEH------NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI  222 (433)
T ss_dssp             EETTTCCEEEECCCHHHHTTCCEEEEEEEGGG------TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT
T ss_pred             EECCCCeEeeecCcccccccCCceeEEEEcCC------CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC
Confidence            7777777776     45578899999999988      899999999999999999886652        2333445667


Q ss_pred             CceEE-EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee--------cCCeEEE-ecccCc
Q psy15191         99 QLHLL-SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG--------FQGSLHL-DVTTWK  168 (312)
Q Consensus        99 ~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~~i~~-d~~~~~  168 (312)
                      +..++ +++.++.|++||+++.+  ......      ....+.+++|+|+++.+++++        .|+.|++ |+.+.+
T Consensus       223 ~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~  294 (433)
T 3bws_A          223 RDLVYCSNWISEDISVIDRKTKL--EIRKTD------KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK  294 (433)
T ss_dssp             TTEEEEEETTTTEEEEEETTTTE--EEEECC------CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred             CCEEEEEecCCCcEEEEECCCCc--EEEEec------CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence            76674 55589999999998743  222222      234589999999999999888        4788988 777776


Q ss_pred             eeeeecccCCceeEEEECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-
Q psy15191        169 QIQTLPCHQLTITQLAFSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-  246 (312)
Q Consensus       169 ~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-  246 (312)
                      ..... .+...+..++|+|+++.+ ++++.|+.|++||+.+.+....+.        +...+.+++|+|++++|++++. 
T Consensus       295 ~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~  365 (433)
T 3bws_A          295 LIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--------VFDKPNTIALSPDGKYLYVSCRG  365 (433)
T ss_dssp             EEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSSEEEEEECTTSSEEEEEECC
T ss_pred             EEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--------CCCCCCeEEEcCCCCEEEEEecC
Confidence            66555 366688999999999755 566899999999999877666554        4566889999999998888776 


Q ss_pred             --------------CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        247 --------------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                    ||.|++||+.++.            .+..+.. ...+.+++|+|+|++|++++    ..|+.|++|
T Consensus       366 ~~~~~~~~~~~g~~dg~v~~~d~~~~~------------~~~~~~~-~~~~~~~~~s~dg~~l~~~~----~~d~~i~v~  428 (433)
T 3bws_A          366 PNHPTEGYLKKGLVLGKVYVIDTTTDT------------VKEFWEA-GNQPTGLDVSPDNRYLVISD----FLDHQIRVY  428 (433)
T ss_dssp             CCCTTTCTTSCCSSCCEEEEEETTTTE------------EEEEEEC-SSSEEEEEECTTSCEEEEEE----TTTTEEEEE
T ss_pred             CCccccccccccccceEEEEEECCCCc------------EEEEecC-CCCCceEEEcCCCCEEEEEE----CCCCeEEEE
Confidence                          5799999998762            4444544 55789999999999998885    235669998

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=3e-28  Score=204.54  Aligned_cols=204  Identities=20%  Similarity=0.294  Sum_probs=163.2

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc---------------cccccccCCC-CC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDS-KQ   99 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~-~~   99 (312)
                      .+.+..+.+|...|++++|+|+      +. +|++|+.||.|++|++..+..               ..+..+.+++ ++
T Consensus       171 ~~~~~~~~~h~~~v~~l~~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~  244 (430)
T 2xyi_A          171 CQPDLRLRGHQKEGYGLSWNPN------LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE  244 (430)
T ss_dssp             CCCSEEEECCSSCCCCEEECTT------STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT
T ss_pred             CCCcEEecCCCCCeEEEEeCCC------CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC
Confidence            3566778889999999999998      66 999999999999999987322               1233344455 56


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcc-eeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-eccc-Cceeeeecc
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTG-LWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTT-WKQIQTLPC  175 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~-~~~~~~~~~  175 (312)
                      .+|++++.|+.|++||+++... .....     +..|...|.+++|+|+++ ++++|+.||.|++ |+++ ......+..
T Consensus       245 ~~l~s~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~  319 (430)
T 2xyi_A          245 SLFGSVADDQKLMIWDTRNNNTSKPSHT-----VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES  319 (430)
T ss_dssp             TEEEEEETTSEEEEEETTCSCSSSCSEE-----EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC
T ss_pred             CEEEEEeCCCeEEEEECCCCCCCcceeE-----eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec
Confidence            7899999999999999997531 11122     236788999999999987 5889999999999 7776 345666778


Q ss_pred             cCCceeEEEECCCCC-EEEEEecCCeEEEEEccCC--------------CeEEEEeccCCCCcccceeeEEEEEcCCCc-
Q psy15191        176 HQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSS--------------GRLSLVACSDKTNGVHKRIIWGVAWSHDSR-  239 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~--------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  239 (312)
                      |...|.+++|+|++. +|++++.|+.|++||+...              ..+.....       |...|++++|+|+++ 
T Consensus       320 h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~~~~~p~~~~  392 (430)
T 2xyi_A          320 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-------HTAKISDFSWNPNEPW  392 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-------CSSCEEEEEECSSSTT
T ss_pred             CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-------CCCCceEEEECCCCCC
Confidence            999999999999985 6899999999999999873              22222222       778899999999999 


Q ss_pred             eEEEeccCCeEEEEecCCC
Q psy15191        240 YFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       240 ~l~s~~~dg~i~iwd~~~~  258 (312)
                      +|++++.||.|+||++...
T Consensus       393 ~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          393 IICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEEEETTSEEEEEEECHH
T ss_pred             EEEEEECCCCEEEeEcccc
Confidence            8999999999999998654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=7.2e-29  Score=203.78  Aligned_cols=236  Identities=15%  Similarity=0.207  Sum_probs=178.4

Q ss_pred             eCCCCeEEEEeccCCCceEEEEEeCCC--C---------------------ceE-EEEccccCcEEEEEEecCcCcCCCC
Q psy15191         10 NGEGGKVLYTLTNHKSKVMAVKWNGEG--G---------------------KVL-YTLTNHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus        10 ~~~~~~~~~~~~~h~~~v~~~~w~~~~--~---------------------~~~-~~~~~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      +....+.+..+.+|.+.|++++|+++.  +                     +.+ ..+.+|...|++++|+|+      +
T Consensus        25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~   98 (368)
T 3mmy_A           25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD------G   98 (368)
T ss_dssp             SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT------S
T ss_pred             CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC------C
Confidence            445567788888999999999988873  2                     222 567789999999999999      8


Q ss_pred             ceEEEecCCCcEEEeeecCCccc-------ccccccC--CCCCceEEEEeCCCcEEEEcCCCCcceeeeeee--------
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY-------LPYHMRD--DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR--------  128 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------  128 (312)
                      ++|++++.||.|++||+.+++..       .+..+.+  ++++.++++++.|+.|++||+++.+........        
T Consensus        99 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~  178 (368)
T 3mmy_A           99 SKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV  178 (368)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred             CEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence            99999999999999999887752       2334444  778889999999999999999875533221110        


Q ss_pred             --------------------------ecccCCCccceeEEEECCCCCe----EEEeecCCeEEE-ecccC---ceeeeec
Q psy15191        129 --------------------------VGEVGGNTLGFYGCKFGPRGDY----IIAHGFQGSLHL-DVTTW---KQIQTLP  174 (312)
Q Consensus       129 --------------------------~~~~~~~~~~v~~~~~~~~~~~----l~~~~~~~~i~~-d~~~~---~~~~~~~  174 (312)
                                                ............++++.++...    +++++.+|.+++ +.+..   .....+.
T Consensus       179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~  258 (368)
T 3mmy_A          179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK  258 (368)
T ss_dssp             ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred             cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence                                      0000112233455555555444    999999999999 55544   3344455


Q ss_pred             ccCC------------ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE
Q psy15191        175 CHQL------------TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL  242 (312)
Q Consensus       175 ~~~~------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  242 (312)
                      .|..            .|.+++|+|++++|++++.||.|++||+++.+.+..+..       |...|++++|+|++++|+
T Consensus       259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~s~~g~~l~  331 (368)
T 3mmy_A          259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-------LDQPISACCFNHNGNIFA  331 (368)
T ss_dssp             CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-------CSSCEEEEEECTTSSCEE
T ss_pred             eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC-------CCCCceEEEECCCCCeEE
Confidence            5655            799999999999999999999999999998877766654       788999999999999999


Q ss_pred             EeccCCeEEEEecCCC
Q psy15191        243 TISRDGVCVVWGLGEP  258 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~  258 (312)
                      +++.|+..+.|++...
T Consensus       332 ~~s~d~~~~~~~~~~~  347 (368)
T 3mmy_A          332 YASSYDWSKGHEFYNP  347 (368)
T ss_dssp             EEECCCSTTCGGGCCT
T ss_pred             EEecccccccccccCC
Confidence            9999986666665443

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=6.2e-26  Score=188.15  Aligned_cols=228  Identities=15%  Similarity=0.100  Sum_probs=176.0

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeC--------------------CCCceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNG--------------------EGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~--------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      .+|+..+++.+..+..|.. +.+++|++                    .+++.+..+..+. .+.+++|+|+      ++
T Consensus        15 ~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spd------g~   86 (391)
T 1l0q_A           15 SVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPD------GK   86 (391)
T ss_dssp             EEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTT------SS
T ss_pred             EEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCC------CC
Confidence            5788888998888887654 67777554                    4456666666554 8999999998      88


Q ss_pred             eE-EEecCCCcEEEeeecCCccc-------ccccccCCCCCceE-EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         67 DL-VSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        67 ~l-~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      +| ++++.|+.|++||+.+++..       .+....+++++..+ ++++.++.|++||+.+.+.  .....     . ..
T Consensus        87 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-----~-~~  158 (391)
T 1l0q_A           87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVS-----V-GR  158 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-----C-CS
T ss_pred             EEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEe-----c-CC
Confidence            76 45667799999999887653       23344557777766 7888899999999987442  22222     1 23


Q ss_pred             ceeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCeE
Q psy15191        138 GFYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGRL  212 (312)
Q Consensus       138 ~v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~  212 (312)
                      .+.+++|+|+++.+ ++++.++.|++ |+++.+....+. +...+.+++|+|++++|++++   .++.|++||+.+.+.+
T Consensus       159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~  237 (391)
T 1l0q_A          159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT  237 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred             CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence            46899999999987 56678899999 888877776665 567899999999999999888   6899999999988777


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecCCCC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~  259 (312)
                      ..+..        ...+.+++|+|++++| ++++.|+.|++||+.++.
T Consensus       238 ~~~~~--------~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~  277 (391)
T 1l0q_A          238 ARIPV--------GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT  277 (391)
T ss_dssp             EEEEC--------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             EEEec--------CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence            66653        2347889999999877 677899999999998763

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=2.1e-26  Score=193.58  Aligned_cols=245  Identities=12%  Similarity=0.058  Sum_probs=188.2

Q ss_pred             EeCCCC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------------cccccCC
Q psy15191         32 WNGEGG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------------PYHMRDD   96 (312)
Q Consensus        32 w~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------------~~~~~~~   96 (312)
                      +++.++  +.+..+..+ ..+.+++|+|+      +.++++++.|+.|++||+.+++...             +....+.
T Consensus       106 ~d~~~~~~~~~~~~~~~-~~~~~~~~s~~------~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~  178 (433)
T 3bws_A          106 LDKEGITHRFISRFKTG-FQPKSVRFIDN------TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP  178 (433)
T ss_dssp             CCBTTCSEEEEEEEECS-SCBCCCEESSS------SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG
T ss_pred             ECCCCCcceEEEEEcCC-CCceEEEEeCC------CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc
Confidence            455444  566666655 44668999888      8899999999999999998876532             2223446


Q ss_pred             CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeec
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLP  174 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~  174 (312)
                      +++.++++++.|+.|++||+++.+.  .....     .+...+.+++|+|+++.+++++ .++.|++ |+++.+....+.
T Consensus       179 ~~~~~~~s~~~d~~v~~~d~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~  251 (433)
T 3bws_A          179 EHNELWVSQMQANAVHVFDLKTLAY--KATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD  251 (433)
T ss_dssp             GGTEEEEEEGGGTEEEEEETTTCCE--EEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred             CCCEEEEEECCCCEEEEEECCCceE--EEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence            6778999999999999999987442  22222     5677899999999999886554 7899999 888777776666


Q ss_pred             ccCCceeEEEECCCCCEEEEEe--------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEec
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVS--------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTIS  245 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~  245 (312)
                      . ...+.+++|+|+++++++++        .|+.|++||+++.+....+.        +...+.+++|+|+++. +++++
T Consensus       252 ~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~  322 (433)
T 3bws_A          252 K-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--------PPGNKRHIVSGNTENKIYVSDM  322 (433)
T ss_dssp             C-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--------EEECEEEEEECSSTTEEEEEET
T ss_pred             C-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--------CCCCcceEEECCCCCEEEEEec
Confidence            4 45699999999999999988        48899999999876665553        5567889999999975 56678


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC----------cccceEEeC
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK----------PEHAAIIIW  312 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~----------~~dg~i~iW  312 (312)
                      .|+.|++||+.++.            .+..+ .+...+.+++|+|+|++|++++.+..          +.||.|++|
T Consensus       323 ~~~~v~v~d~~~~~------------~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~  386 (433)
T 3bws_A          323 CCSKIEVYDLKEKK------------VQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI  386 (433)
T ss_dssp             TTTEEEEEETTTTE------------EEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred             CCCEEEEEECCCCc------------EEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence            99999999998652            33444 36778999999999999988876421          126789987

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.96  E-value=8e-28  Score=199.53  Aligned_cols=163  Identities=13%  Similarity=0.133  Sum_probs=122.2

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC--------CCCeEEEeecCCeEEE-eccc
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP--------RGDYIIAHGFQGSLHL-DVTT  166 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~~~~i~~-d~~~  166 (312)
                      .+++.++++++.|++|++||.++++  .........+.+|...|.+++|+|        ++++|++++.|+.|++ |+++
T Consensus        98 ~~~~~~las~~~d~~v~lw~~~~~~--~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~  175 (393)
T 4gq1_A           98 PVYSLFLACVCQDNTVRLIITKNET--IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD  175 (393)
T ss_dssp             CEEEEEEEEEETTSCEEEEEEETTE--EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred             CCCCCEEEEEeCCCcEEEEECCCCc--cceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence            3455689999999999999998743  333334456779999999999998        7899999999999999 6655


Q ss_pred             CceeeeecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCC------------------Ccccce
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------------------NGVHKR  227 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------------~~~~~~  227 (312)
                      ......+..|...+.+++|+|++ .+|++++.|+.|++||+++.+...........                  ...|..
T Consensus       176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  255 (393)
T 4gq1_A          176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS  255 (393)
T ss_dssp             TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred             CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence            55555566799999999999987 47999999999999999986654332211100                  112667


Q ss_pred             eeEEEEEc-CCCceEEEeccCCeEEEEecCCCCC
Q psy15191        228 IIWGVAWS-HDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       228 ~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      .+.++.|+ |+++.|++++.|+.+++||+..+..
T Consensus       256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~  289 (393)
T 4gq1_A          256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANND  289 (393)
T ss_dssp             SCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred             cceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence            78889986 8999999999999999999987643

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.96  E-value=3.8e-27  Score=185.83  Aligned_cols=196  Identities=10%  Similarity=0.066  Sum_probs=122.5

Q ss_pred             eEeCCCCeEEEE-eccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCC
Q psy15191          8 VVNGEGGKVLYT-LTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSE   85 (312)
Q Consensus         8 v~~~~~~~~~~~-~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~   85 (312)
                      +|+..+++.+.+ ..+|...|..++++++ |+.+..+.+|...+..++|+| +    +++.+|++++.|++|+|||+.++
T Consensus       139 v~~l~~g~lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~~~~~~v~~l~fs~~~----g~~~~LaSgS~D~TIkIWDl~TG  213 (356)
T 2w18_A          139 VLGLTKRRLVSSSGTLSDQQVEVMTFAED-GGGKENQFLMPPEETILTFAEVQ----GMQEALLGTTIMNNIVIWNLKTG  213 (356)
T ss_dssp             EEEETTTEEEEEESSSTTCEEEEEEECTT-SCEEEEEEECCCSSCEEEEEEEE----TSTTEEEEEETTSEEEEEETTTC
T ss_pred             EEecCCCcEEEecccCCCCcEEEEEECCC-CceeeeeccCCCceeeEEeeccC----CCCceEEEecCCCcEEEEECCCC
Confidence            444555555555 3455555555555443 445555555555555555555 2    22455555555555555555554


Q ss_pred             cccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeE------------EE
Q psy15191         86 GNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI------------IA  153 (312)
Q Consensus        86 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~  153 (312)
                      +....                                    +..  -..+...+.+++|+|+++++            ++
T Consensus       214 k~l~t------------------------------------L~g--~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS  255 (356)
T 2w18_A          214 QLLKK------------------------------------MHI--DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL  255 (356)
T ss_dssp             CEEEE------------------------------------EEC--CC---CCCEEEEEEETTEEEEEEC----------
T ss_pred             cEEEE------------------------------------EcC--CCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence            43221                                    110  00112245666778877765            56


Q ss_pred             eecCCeEEE-ecccCceeeee-----cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccce
Q psy15191        154 HGFQGSLHL-DVTTWKQIQTL-----PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR  227 (312)
Q Consensus       154 ~~~~~~i~~-d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~  227 (312)
                      |+.|+.+++ |..+.+....+     .+|...+.+..++  +.++++++.|++|+|||+.+++.+..+.+       |..
T Consensus       256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~g-------H~~  326 (356)
T 2w18_A          256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPP-------VSD  326 (356)
T ss_dssp             --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECC-------C--
T ss_pred             cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecC-------CCC
Confidence            778899999 77776665543     2565555444443  77899999999999999999999888875       554


Q ss_pred             ee-EEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        228 II-WGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       228 ~v-~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      .+ ..++|+|+|++|++|+.|++|+|||+
T Consensus       327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            44 46899999999999999999999986

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=9e-27  Score=190.59  Aligned_cols=247  Identities=8%  Similarity=0.048  Sum_probs=156.7

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEE-------E---------EccccCcEEEEEEecCcCcCCCCceE-E
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLY-------T---------LTNHKSKVMAVKWVLNTSLDPEHKDL-V   69 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~-------~---------~~~h~~~v~~~~~~~~~~~~~~~~~l-~   69 (312)
                      .+++..+.+++..+..|...|.+++|++++.....       .         +..+...+..+++.++      ++.+ +
T Consensus         2 ~i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~   75 (355)
T 3vu4_A            2 PLGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHR------TNYVAF   75 (355)
T ss_dssp             -----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTT------SSEEEE
T ss_pred             CcccccccCCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCC------CCEEEE
Confidence            46777788888888899999999999887532211       0         1112234666777776      5565 6


Q ss_pred             EecCCCcEEEeeecCCcccccc-------cccCCCC-----------------C------------------ceEEE--E
Q psy15191         70 SCSLDKTAILWKYVSEGNYLPY-------HMRDDSK-----------------Q------------------LHLLS--C  105 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~~~~~-------~~~~~~~-----------------~------------------~~l~~--~  105 (312)
                      +++.|++|++||..+++.....       ...++++                 +                  ..++.  +
T Consensus        76 ~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg  155 (355)
T 3vu4_A           76 VTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE  155 (355)
T ss_dssp             ECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES
T ss_pred             EECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC
Confidence            7888899999999877642100       0000110                 0                  13333  5


Q ss_pred             eCCCcEEEEcCCCCcceee--------eeee-ecccCCCccceeEEEECCCCCeEEEeecCCe-EEE-ecccCceeeeec
Q psy15191        106 SMDKSIIVWAPDPTTGLWL--------ETAR-VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-LHL-DVTTWKQIQTLP  174 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~--------~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-i~~-d~~~~~~~~~~~  174 (312)
                      +.+|.|++||+.+......        ...+ ...+.+|...|.+++|+|++++|++++.|+. |++ |+++++....+.
T Consensus       156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~  235 (355)
T 3vu4_A          156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR  235 (355)
T ss_dssp             SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred             CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence            7888888888876431000        0001 2345689999999999999999999999998 999 888888888887


Q ss_pred             -c-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC-------C---------CCcccceeeEEEEEcC
Q psy15191        175 -C-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD-------K---------TNGVHKRIIWGVAWSH  236 (312)
Q Consensus       175 -~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------~---------~~~~~~~~v~~~~~~~  236 (312)
                       + |...|.+++|+|++++|++++.|+.|++||++............       .         ...........++|+|
T Consensus       236 ~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  315 (355)
T 3vu4_A          236 RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS  315 (355)
T ss_dssp             CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS
T ss_pred             cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC
Confidence             5 99999999999999999999999999999997643211110000       0         0000122336789999


Q ss_pred             CCceEEEeccCCeEEEEecCCCC
Q psy15191        237 DSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       237 ~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ++++|++++.||.+++|++..+.
T Consensus       316 d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          316 ESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             SSEEEEEETTTTEEEEEEEEEET
T ss_pred             CCCEEEEEeCCCeEEEEEEEcCC
Confidence            99999999999999999987653

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=5.4e-25  Score=183.64  Aligned_cols=225  Identities=10%  Similarity=0.009  Sum_probs=173.9

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC---cEEEeeecCCccc-------ccccccCCCCCc
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK---TAILWKYVSEGNY-------LPYHMRDDSKQL  100 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg---~i~vw~~~~~~~~-------~~~~~~~~~~~~  100 (312)
                      .|+.++ ...+.+.+|...|.+++|+|+      |++|++++.|+   .|++||+.+++..       .+....++|++.
T Consensus       163 i~d~~g-~~~~~l~~~~~~v~~~~~Spd------g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~  235 (415)
T 2hqs_A          163 VSDYDG-YNQFVVHRSPQPLMSPAWSPD------GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGS  235 (415)
T ss_dssp             EEETTS-CSCEEEEEESSCEEEEEECTT------SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSS
T ss_pred             EEcCCC-CCCEEEeCCCCcceeeEEcCC------CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCC
Confidence            377764 456778889999999999999      99999999875   9999999887653       233455688888


Q ss_pred             eEE-EEeCCCc--EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC--eEEE-ecccCceeeee
Q psy15191        101 HLL-SCSMDKS--IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG--SLHL-DVTTWKQIQTL  173 (312)
Q Consensus       101 ~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-d~~~~~~~~~~  173 (312)
                      .|+ +++.++.  |++||+.+.+..        .+..+...+.+++|+|+|+.|++++. ++  .|.+ |+.+.+.. .+
T Consensus       236 ~la~~~~~~g~~~i~~~d~~~~~~~--------~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l  306 (415)
T 2hqs_A          236 KLAFALSKTGSLNLYVMDLASGQIR--------QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RI  306 (415)
T ss_dssp             EEEEEECTTSSCEEEEEETTTCCEE--------ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-EC
T ss_pred             EEEEEEecCCCceEEEEECCCCCEE--------eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EE
Confidence            777 6666665  999999874421        12356677899999999999988876 44  5665 77666543 34


Q ss_pred             cccCCceeEEEECCCCCEEEEEecC---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--  248 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--  248 (312)
                      ..+...+..++|+|+|++|++++.+   ..|++||+.+.+... +..       +. .+.+++|+|+|++|++++.++  
T Consensus       307 ~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~-------~~-~~~~~~~spdg~~l~~~s~~~~~  377 (415)
T 2hqs_A          307 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSS-------TF-LDETPSLAPNGTMVIYSSSQGMG  377 (415)
T ss_dssp             CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCC-------SS-SCEEEEECTTSSEEEEEEEETTE
T ss_pred             ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecC-------CC-CcCCeEEcCCCCEEEEEEcCCCc
Confidence            4567789999999999999988765   589999999776532 221       32 688999999999999988777  


Q ss_pred             -eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        249 -VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       249 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                       .|++||+...             ....+.+|.+.|.+++|+|.-.
T Consensus       378 ~~l~~~d~~g~-------------~~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          378 SVLNLVSTDGR-------------FKARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             EEEEEEETTSC-------------CEEECCCSSSEEEEEEECCCCC
T ss_pred             cEEEEEECCCC-------------cEEEeeCCCCCCcCCccccccc
Confidence             8999998754             5778889999999999999754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=1.7e-25  Score=186.69  Aligned_cols=251  Identities=11%  Similarity=0.029  Sum_probs=182.1

Q ss_pred             EEEEeC--CCCceE--EEEccccCcEEEEEEecCc--------CcCCCCceEEEecCC------CcEEEeeecCCccc--
Q psy15191         29 AVKWNG--EGGKVL--YTLTNHKSKVMAVKWVLNT--------SLDPEHKDLVSCSLD------KTAILWKYVSEGNY--   88 (312)
Q Consensus        29 ~~~w~~--~~~~~~--~~~~~h~~~v~~~~~~~~~--------~~~~~~~~l~s~~~d------g~i~vw~~~~~~~~--   88 (312)
                      ...||.  .+++++  ..+.+|...+..+++.+..        .-...+..++.++.+      +.|++||+......  
T Consensus        95 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l  174 (415)
T 2hqs_A           95 YQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVV  174 (415)
T ss_dssp             EEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEE
T ss_pred             EEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEE
Confidence            345999  888887  5588998888888776510        000113456665554      79999999765431  


Q ss_pred             -----ccccccCCCCCceEEEEeCCC---cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCe
Q psy15191         89 -----LPYHMRDDSKQLHLLSCSMDK---SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGS  159 (312)
Q Consensus        89 -----~~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~  159 (312)
                           .+....++|++..|++++.++   .|++||+.+++...   .     ..+...+.+++|+|+|+.|+ +++.++.
T Consensus       175 ~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~---l-----~~~~~~~~~~~~spdg~~la~~~~~~g~  246 (415)
T 2hqs_A          175 HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ---V-----ASFPRHNGAPAFSPDGSKLAFALSKTGS  246 (415)
T ss_dssp             EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE---E-----ECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred             eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE---e-----ecCCCcccCEEEcCCCCEEEEEEecCCC
Confidence                 344456788999999999875   99999999854321   1     24556789999999999888 5555554


Q ss_pred             --EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CC--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191        160 --LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DR--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA  233 (312)
Q Consensus       160 --i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~  233 (312)
                        |++ |+.+.+. ..+..|...+.+++|+|||++|++++. ++  .|++||+.+.+... +..       +...+.+++
T Consensus       247 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~-------~~~~~~~~~  317 (415)
T 2hqs_A          247 LNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-ITW-------EGSQNQDAD  317 (415)
T ss_dssp             CEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CCC-------SSSEEEEEE
T ss_pred             ceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Eec-------CCCcccCeE
Confidence              776 7777665 455568889999999999999988876 44  68888988765432 221       556788999


Q ss_pred             EcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEE
Q psy15191        234 WSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAII  310 (312)
Q Consensus       234 ~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~  310 (312)
                      |+|+|++|++++.+   ..|++||+.++             ....+..+. .+.+++|+|+|++|++++.++.  ...|+
T Consensus       318 ~spdG~~l~~~~~~~g~~~i~~~d~~~~-------------~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~--~~~l~  381 (415)
T 2hqs_A          318 VSSDGKFMVMVSSNGGQQHIAKQDLATG-------------GVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM--GSVLN  381 (415)
T ss_dssp             ECTTSSEEEEEEECSSCEEEEEEETTTC-------------CEEECCCSS-SCEEEEECTTSSEEEEEEEETT--EEEEE
T ss_pred             ECCCCCEEEEEECcCCceEEEEEECCCC-------------CEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC--ccEEE
Confidence            99999999988764   58999999876             234455554 8899999999999999976542  22466


Q ss_pred             eC
Q psy15191        311 IW  312 (312)
Q Consensus       311 iW  312 (312)
                      +|
T Consensus       382 ~~  383 (415)
T 2hqs_A          382 LV  383 (415)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=1.2e-24  Score=173.08  Aligned_cols=240  Identities=13%  Similarity=0.041  Sum_probs=175.5

Q ss_pred             EEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-Cccc---------ccccccCCCCC
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-EGNY---------LPYHMRDDSKQ   99 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-~~~~---------~~~~~~~~~~~   99 (312)
                      ..|+..+++.. .+..|...|.+++|+|+      +++|++++ ++.|++||+.+ ++..         .+....+++++
T Consensus        25 ~~~d~~~~~~~-~~~~~~~~v~~~~~spd------g~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg   96 (297)
T 2ojh_A           25 EIFNIRTRKMR-VVWQTPELFEAPNWSPD------GKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG   96 (297)
T ss_dssp             EEEETTTTEEE-EEEEESSCCEEEEECTT------SSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred             EEEeCCCCcee-eeccCCcceEeeEECCC------CCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence            34898888766 55568999999999999      99999886 78999999988 6542         22335567888


Q ss_pred             ceEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCeEEE---ecccCceeeee
Q psy15191        100 LHLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL---DVTTWKQIQTL  173 (312)
Q Consensus       100 ~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~---d~~~~~~~~~~  173 (312)
                      ..+++++  .++...+|.++...... ...      .....+..++|+|+++.++ ++..++.+.+   +..+... ..+
T Consensus        97 ~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~------~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~  168 (297)
T 2ojh_A           97 ALYAISDKVEFGKSAIYLLPSTGGTP-RLM------TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRL  168 (297)
T ss_dssp             SEEEEEECTTTSSCEEEEEETTCCCC-EEC------CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EEC
T ss_pred             CEEEEEEeCCCCcceEEEEECCCCce-EEe------ecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEc
Confidence            8999988  33555555543221211 111      1222478899999999887 6778888877   3433333 344


Q ss_pred             cccCCceeEEEECCCCCEEEEEe-cCCeEEEEEcc-CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC----
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQ-SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD----  247 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----  247 (312)
                      ..+...+.+++|+|++++|+.++ .++.+++|++. .......+..       +...+..++|+|++++|++++.+    
T Consensus       169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~  241 (297)
T 2ojh_A          169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-------SAYGDWFPHPSPSGDKVVFVSYDADVF  241 (297)
T ss_dssp             CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-------CSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred             ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-------CCcccCCeEECCCCCEEEEEEcCCCCC
Confidence            46778899999999999888766 58999999987 3444443332       56778899999999999988765    


Q ss_pred             -------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        248 -------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       248 -------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                             +.|++||+..+..          ..+..+.+|...+..++|+|+|++|++++.+.
T Consensus       242 ~~~~~~~~~l~~~d~~~~~~----------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          242 DHPRDLDVRVQLMDMDGGNV----------ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             SCCSSEEEEEEEEETTSCSC----------EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             cccccCceEEEEEecCCCCc----------eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence                   5699999977632          13455567888999999999999999997654

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.94  E-value=3.1e-23  Score=178.21  Aligned_cols=281  Identities=7%  Similarity=0.028  Sum_probs=197.0

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEE-------------------EeC--CCCceEEEEccccCcEEEEEEec----CcCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVK-------------------WNG--EGGKVLYTLTNHKSKVMAVKWVL----NTSL   61 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~-------------------w~~--~~~~~~~~~~~h~~~v~~~~~~~----~~~~   61 (312)
                      .+|+..+++.+.++..+.. +..++                   |+.  .+++++.++. +...+..++|+|    +   
T Consensus       162 ~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~d---  236 (543)
T 1nir_A          162 ALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYE---  236 (543)
T ss_dssp             EEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCT---
T ss_pred             EEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCC---
Confidence            4677777777777763222 55554                   666  5677777777 445688999998    8   


Q ss_pred             CCCCceEEEec-CCCcEEEeeecCCcccccc-------------------cccCCC-CCceEEEEeCCCcEEEEcCCCCc
Q psy15191         62 DPEHKDLVSCS-LDKTAILWKYVSEGNYLPY-------------------HMRDDS-KQLHLLSCSMDKSIIVWAPDPTT  120 (312)
Q Consensus        62 ~~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~-------------------~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~  120 (312)
                         |++|++++ .+++|.+||..+.+.....                   ....++ ...++++...++.|.+||+.+.+
T Consensus       237 ---g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~  313 (543)
T 1nir_A          237 ---DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID  313 (543)
T ss_dssp             ---TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred             ---CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence               89998887 4899999998887653221                   112233 33456777888999999998754


Q ss_pred             ceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecc----cCCceeEEEECCC-CCEEE
Q psy15191        121 GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPD-DTHLV  193 (312)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~  193 (312)
                      ........      +...+.++.|+|+++++++++ .++.|.+ |..+.++...+..    |.+....+ ++|+ +..++
T Consensus       314 ~l~~~~i~------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~  386 (543)
T 1nir_A          314 NLTVTSIG------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWS  386 (543)
T ss_dssp             SCEEEEEE------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEE
T ss_pred             cceeEEec------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEE
Confidence            33222222      234577899999999877655 5788888 9999888877663    55444443 4677 66666


Q ss_pred             EEe-cCCeEEEEEccC-------CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-------cCCeEEEEecCCC
Q psy15191        194 SVS-RDRRWGLYKRQS-------SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-------RDGVCVVWGLGEP  258 (312)
Q Consensus       194 ~~~-~d~~i~~wd~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~  258 (312)
                      ++. .|++|.+||+.+       .+.+..+..       +...+..++++|++++|++++       .++.|.+||+.+.
T Consensus       387 s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~-------~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~  459 (543)
T 1nir_A          387 TSHLGDGSISLIGTDPKNHPQYAWKKVAELQG-------QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL  459 (543)
T ss_dssp             EEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-------SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred             eccCCCceEEEEEeCCCCCchhcCeEEEEEEc-------CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence            665 589999999988       677777775       556677899999999999987       3679999999987


Q ss_pred             CCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...........|   ..+..+...+..++|+|+|+.|.++...++++|+.|.||
T Consensus       460 ~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~  510 (543)
T 1nir_A          460 DAKYQVLPIAEW---ADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVV  510 (543)
T ss_dssp             TSCCEEECHHHH---HCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEE
T ss_pred             CCCeEEeechhh---cccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEE
Confidence            532110000000   012356778999999999999998866555567889887

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.94  E-value=1.2e-22  Score=165.20  Aligned_cols=269  Identities=11%  Similarity=0.116  Sum_probs=174.7

Q ss_pred             eEEEEeccCCCceEEEEEeCC-CC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC-CcEEEeeec--CCccc
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGE-GG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-KTAILWKYV--SEGNY   88 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~-~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-g~i~vw~~~--~~~~~   88 (312)
                      +.++......+.|..  |+.+ ++  +.+..+ .|...+.+++|+|+      +++|++++.+ +.|++|++.  ++...
T Consensus         5 ~~l~~~~~~~~~v~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~spd------g~~l~~~~~~~~~v~~~~~~~~~~~~~   75 (343)
T 1ri6_A            5 QTVYIASPESQQIHV--WNLNHEGALTLTQVV-DVPGQVQPMVVSPD------KRYLYVGVRPEFRVLAYRIAPDDGALT   75 (343)
T ss_dssp             EEEEEEEGGGTEEEE--EEECTTSCEEEEEEE-ECSSCCCCEEECTT------SSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EEEEEeCCCCCeEEE--EEECCCCcEEEeeeE-ecCCCCceEEECCC------CCEEEEeecCCCeEEEEEecCCCCcee
Confidence            445554444555533  5543 33  333333 47778999999999      8888888776 999999997  44421


Q ss_pred             ---------ccccccCCCCCceEEEEe-CCCcEEEEcCCCCcc-eeeeeeeecccCCCccceeEEEECCCCCeEEEee-c
Q psy15191         89 ---------LPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTG-LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-F  156 (312)
Q Consensus        89 ---------~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~  156 (312)
                               .+..+.+++++.++++++ .++.|.+||+..+.. ......      .....+.+++|+|+++++++++ .
T Consensus        76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~~  149 (343)
T 1ri6_A           76 FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV------EGLDGCHSANISPDNRTLWVPALK  149 (343)
T ss_dssp             EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE------CCCTTBCCCEECTTSSEEEEEEGG
T ss_pred             eccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc------cCCCCceEEEECCCCCEEEEecCC
Confidence                     233344577887776665 488899999852211 111111      1233578899999999888877 8


Q ss_pred             CCeEEE-eccc-Cceee----eec-ccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccC--CCe--EEEEeccCCCCcc
Q psy15191        157 QGSLHL-DVTT-WKQIQ----TLP-CHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQS--SGR--LSLVACSDKTNGV  224 (312)
Q Consensus       157 ~~~i~~-d~~~-~~~~~----~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~--~~~--~~~~~~~~~~~~~  224 (312)
                      ++.+.+ |+.+ .++..    ... .....+..++|+|+++++++++ .++.|.+||+..  ...  ........ ....
T Consensus       150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~-~~~~  228 (343)
T 1ri6_A          150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP-ENFS  228 (343)
T ss_dssp             GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC-TTCC
T ss_pred             CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC-cccc
Confidence            899998 6665 43332    122 2345788999999999776554 789999999964  222  12222111 0001


Q ss_pred             cceeeEEEEEcCCCceEE-EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        225 HKRIIWGVAWSHDSRYFL-TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       225 ~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ....+..++|+|++++|+ ++..++.|.+||+......        .+.+..+..+.. +.+++|+|+|++|++++    
T Consensus       229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~--------~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~----  295 (343)
T 1ri6_A          229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV--------LSKEGFQPTETQ-PRGFNVDHSGKYLIAAG----  295 (343)
T ss_dssp             SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC--------EEEEEEEECSSS-CCCEEECTTSSEEEEEC----
T ss_pred             ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc--------eEEeeeecCCCc-cceEEECCCCCEEEEec----
Confidence            234567899999998777 5557999999999742111        113444544444 88999999999888885    


Q ss_pred             cccceEEeC
Q psy15191        304 PEHAAIIIW  312 (312)
Q Consensus       304 ~~dg~i~iW  312 (312)
                      ..++.|.+|
T Consensus       296 ~~~~~v~v~  304 (343)
T 1ri6_A          296 QKSHHISVY  304 (343)
T ss_dssp             TTTCEEEEE
T ss_pred             CCCCeEEEE
Confidence            245568887

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.93  E-value=5.3e-23  Score=176.77  Aligned_cols=275  Identities=8%  Similarity=0.067  Sum_probs=193.4

Q ss_pred             EEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeee--cCCccc------
Q psy15191         17 LYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY--VSEGNY------   88 (312)
Q Consensus        17 ~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~--~~~~~~------   88 (312)
                      ++......+.|  ..||..+++++.++..+.. +..++|+|+      |++|++++.|++|++||+  .+++..      
T Consensus       151 ~~vs~~~d~~V--~v~D~~t~~~~~~i~~g~~-~~~v~~spd------g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g  221 (543)
T 1nir_A          151 FSVTLRDAGQI--ALVDGDSKKIVKVIDTGYA-VHISRMSAS------GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG  221 (543)
T ss_dssp             EEEEEGGGTEE--EEEETTTCCEEEEEECSTT-EEEEEECTT------SCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred             EEEEEcCCCeE--EEEECCCceEEEEEecCcc-cceEEECCC------CCEEEEECCCCeEEEEECcCCCCcEEEEEecC
Confidence            33444444444  3389999999999984333 899999999      999999999999999999  666542      


Q ss_pred             -ccccccCCC----CCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecc--cC----CCccceeEEEECCCCCe-EEEee
Q psy15191         89 -LPYHMRDDS----KQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGE--VG----GNTLGFYGCKFGPRGDY-IIAHG  155 (312)
Q Consensus        89 -~~~~~~~~~----~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~--~~----~~~~~v~~~~~~~~~~~-l~~~~  155 (312)
                       .+..+.+++    ++.++++++ .+++|.+||..+.+.  +.......  ..    .....+.++.++|++.. +++..
T Consensus       222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~  299 (543)
T 1nir_A          222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK  299 (543)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred             CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence             233445577    888888887 489999999987543  33332211  00    11236889999997765 45566


Q ss_pred             cCCeEEE-ecccCceee--eecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEE
Q psy15191        156 FQGSLHL-DVTTWKQIQ--TLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG  231 (312)
Q Consensus       156 ~~~~i~~-d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~  231 (312)
                      .++.|.+ |..+.+...  .+ .+...+..+.|+|+|++|++++ .+++|.+||+.+++....+......   |......
T Consensus       300 ~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p---h~g~g~~  375 (543)
T 1nir_A          300 ETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP---HPGRGAN  375 (543)
T ss_dssp             TTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB---CCTTCEE
T ss_pred             CCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCC---CCCCCcc
Confidence            7888988 766654433  33 3566788999999999877654 5899999999998877766642211   3322222


Q ss_pred             EEEcCC-CceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc--ccc
Q psy15191        232 VAWSHD-SRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP--EHA  307 (312)
Q Consensus       232 ~~~~~~-~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~--~dg  307 (312)
                      + ++|+ +.+++++. .|++|.+||+......     ...|+.++++.+|...+..++|+|+|++|.+++.-+..  .++
T Consensus       376 ~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~-----~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~  449 (543)
T 1nir_A          376 F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP-----QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQ  449 (543)
T ss_dssp             E-EETTTEEEEEEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHT
T ss_pred             c-CCCCCccEEEeccCCCceEEEEEeCCCCCc-----hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCc
Confidence            3 4677 66777775 6899999999874221     22356899999999999999999999999998632110  255


Q ss_pred             eEEeC
Q psy15191        308 AIIIW  312 (312)
Q Consensus       308 ~i~iW  312 (312)
                      +|.||
T Consensus       450 ~v~v~  454 (543)
T 1nir_A          450 SVAVF  454 (543)
T ss_dssp             CEEEE
T ss_pred             eEEEE
Confidence            68887

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.93  E-value=5.6e-22  Score=161.75  Aligned_cols=269  Identities=9%  Similarity=0.058  Sum_probs=174.6

Q ss_pred             CCceEEEEEeCCCCceEE-EEccccCcEEEEEEecCcCcCCCCceEEEecC---CCcEEEeeecCCcc----------cc
Q psy15191         24 KSKVMAVKWNGEGGKVLY-TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL---DKTAILWKYVSEGN----------YL   89 (312)
Q Consensus        24 ~~~v~~~~w~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~~~~----------~~   89 (312)
                      ...|..+.|+..+++... ....+...+..++|+|+      |+ |++++.   ++.|.+|++.++..          ..
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spd------g~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~   87 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAK------DC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP   87 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTT------CE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccC------Ce-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC
Confidence            445777778888887654 34456677888999998      88 555443   68999999976653          12


Q ss_pred             cccccCCCCCceEEEEe-CCCcEEEEcCCCC-cceeeeeeeeccc----CCCccceeEEEECCCCCeEEEeecCCeEEE-
Q psy15191         90 PYHMRDDSKQLHLLSCS-MDKSIIVWAPDPT-TGLWLETARVGEV----GGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-  162 (312)
Q Consensus        90 ~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~-~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-  162 (312)
                      +..+.+++++.+|++++ .++.|.+|++... ....+........    ......+.+++|+|+++.+++...++.+.+ 
T Consensus        88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~  167 (347)
T 3hfq_A           88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY  167 (347)
T ss_dssp             CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence            33445577888788777 7789999999632 2222222211000    012235788999999996666666888888 


Q ss_pred             ecc-cCceeee--ecc-cCCceeEEEECCCCCEEEE-EecCCeEEEEEccCC-CeEEEEec-cC-CCCcccceeeEEEEE
Q psy15191        163 DVT-TWKQIQT--LPC-HQLTITQLAFSPDDTHLVS-VSRDRRWGLYKRQSS-GRLSLVAC-SD-KTNGVHKRIIWGVAW  234 (312)
Q Consensus       163 d~~-~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~-~~~~~~~~-~~-~~~~~~~~~v~~~~~  234 (312)
                      ++. +..+...  +.. ....+..++|+|||+++++ ...++.|.+|++... ..+..... .. .........+..++|
T Consensus       168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (347)
T 3hfq_A          168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL  247 (347)
T ss_dssp             EECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE
T ss_pred             EECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE
Confidence            555 3332211  121 2336788999999996666 456789999998852 22221111 10 000012245889999


Q ss_pred             cCCCceEE-EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        235 SHDSRYFL-TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       235 ~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|+|++|+ +...++.|.+|++.....         .+.+..+..+...+..++|+|+|++|++++.    .++.|.+|
T Consensus       248 spdG~~l~v~~~~~~~v~v~~~~~~g~---------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~----~~~~v~v~  313 (347)
T 3hfq_A          248 SHDGHFLYVSNRGYNTLAVFAVTADGH---------LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ----NTDNATLY  313 (347)
T ss_dssp             CTTSCEEEEEEETTTEEEEEEECGGGC---------EEEEEEEECSSSCCCEEEECTTSSEEEEEET----TTTEEEEE
T ss_pred             CCCCCEEEEEeCCCCEEEEEEECCCCc---------EEEeEEEecCCCCcCeEEECCCCCEEEEEEc----CCCcEEEE
Confidence            99999874 555689999999874211         1245566666777899999999998888863    33557776

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.92  E-value=5.3e-22  Score=160.73  Aligned_cols=260  Identities=10%  Similarity=0.055  Sum_probs=174.5

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEEEeeecCCcc-c---
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKYVSEGN-Y---   88 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~-~---   88 (312)
                      +..++......+.|  ..|+..+++.+..+..+...+ .++|+|+      ++++++++ .++.|.+||..+++. .   
T Consensus         9 ~~~~~v~~~~~~~v--~~~d~~~~~~~~~~~~~~~~~-~~~~s~d------g~~l~~~~~~~~~i~~~d~~~~~~~~~~~   79 (331)
T 3u4y_A            9 SNFGIVVEQHLRRI--SFFSTDTLEILNQITLGYDFV-DTAITSD------CSNVVVTSDFCQTLVQIETQLEPPKVVAI   79 (331)
T ss_dssp             CCEEEEEEGGGTEE--EEEETTTCCEEEEEECCCCEE-EEEECSS------SCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred             CCEEEEEecCCCeE--EEEeCcccceeeeEEccCCcc-eEEEcCC------CCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence            34444444344444  338999999998888777777 9999998      87665554 488999999988775 2   


Q ss_pred             ----cccc-ccCCCCCceEEEEeCCC---cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCe
Q psy15191         89 ----LPYH-MRDDSKQLHLLSCSMDK---SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGS  159 (312)
Q Consensus        89 ----~~~~-~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~  159 (312)
                          .... ..+++++.+++++..++   .|.+||+.+.+.  .....      ....+.+++|+|+|+++++++ .++.
T Consensus        80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~--~~~~~------~~~~~~~~~~spdg~~l~~~~~~~~~  151 (331)
T 3u4y_A           80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF--ISTIP------IPYDAVGIAISPNGNGLILIDRSSAN  151 (331)
T ss_dssp             EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE--EEEEE------CCTTEEEEEECTTSSCEEEEEETTTT
T ss_pred             ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe--EEEEE------CCCCccceEECCCCCEEEEEecCCCc
Confidence                2233 45678888888555553   899999987443  22222      123468999999998766654 4466


Q ss_pred             -EEE-ecccCcee----eeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCe---EEEEeccCCCCcccceee
Q psy15191        160 -LHL-DVTTWKQI----QTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGR---LSLVACSDKTNGVHKRII  229 (312)
Q Consensus       160 -i~~-d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~v  229 (312)
                       +.+ ++......    ............++|+|+|++++.+ ..++.|++||+.+.+.   +..+.        ....+
T Consensus       152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~  223 (331)
T 3u4y_A          152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--------TNNLP  223 (331)
T ss_dssp             EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--------CSSCC
T ss_pred             eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--------CCCCC
Confidence             877 33221111    1111344567899999999966555 4689999999998877   55555        33456


Q ss_pred             EEEEEcCCCceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeecc----Ccc---eeEEEeccCCCeEEEEecC
Q psy15191        230 WGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH----GYE---IYSLAASHDGTLLASACKA  301 (312)
Q Consensus       230 ~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---v~~~~~s~~~~~l~s~s~d  301 (312)
                      ..++|+|+|++|+.++ .++.|.+||+.++...          .+..+..+    ...   ...++|+|+|++|++++  
T Consensus       224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~--  291 (331)
T 3u4y_A          224 GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS----------FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISA--  291 (331)
T ss_dssp             CCEEECTTSSEEEEECSSEEEEEEEETTTTEEE----------EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEE--
T ss_pred             ceEEECCCCCEEEEEEcCCCEEEEEECCCCcee----------eecccccccccCCCCcccccceEECCCCCEEEEec--
Confidence            7899999999776554 5778999999876321          12222211    222   35689999999887665  


Q ss_pred             CCcccceEEeC
Q psy15191        302 TKPEHAAIIIW  312 (312)
Q Consensus       302 ~~~~dg~i~iW  312 (312)
                        ..++.|.+|
T Consensus       292 --~~~~~v~v~  300 (331)
T 3u4y_A          292 --NISRELKVF  300 (331)
T ss_dssp             --TTTTEEEEE
T ss_pred             --CCCCcEEEE
Confidence              345568887

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.92  E-value=4.7e-21  Score=157.16  Aligned_cols=267  Identities=13%  Similarity=0.142  Sum_probs=170.5

Q ss_pred             CCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC----CcEEEeeecCC--ccc--------
Q psy15191         23 HKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD----KTAILWKYVSE--GNY--------   88 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d----g~i~vw~~~~~--~~~--------   88 (312)
                      ....|....++..+++.......+...+..++|+|+      +++|++++.+    +.|.+|++...  ...        
T Consensus        25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spd------g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~   98 (361)
T 3scy_A           25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSAD------GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM   98 (361)
T ss_dssp             SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTT------SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS
T ss_pred             CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCC------CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC
Confidence            345788888888888765443337778889999999      8999888875    79999998763  221        


Q ss_pred             --ccccccCCCCCceEEEEe-CCCcEEEEcCCCCccee-eeee-eec-----ccCCCccceeEEEECCCCCeEEEee-cC
Q psy15191         89 --LPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLW-LETA-RVG-----EVGGNTLGFYGCKFGPRGDYIIAHG-FQ  157 (312)
Q Consensus        89 --~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~-~~~~-~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~-~~  157 (312)
                        .......  ++.++++++ .++.|.+|++....... .... ...     ....+...+.+++|+|++++++++. .+
T Consensus        99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  176 (361)
T 3scy_A           99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT  176 (361)
T ss_dssp             SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT
T ss_pred             CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC
Confidence              1111222  455555554 67899999987532211 1000 000     0011233468899999999776655 47


Q ss_pred             CeEEE-ecccCc-------ee------eeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCC
Q psy15191        158 GSLHL-DVTTWK-------QI------QTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTN  222 (312)
Q Consensus       158 ~~i~~-d~~~~~-------~~------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~  222 (312)
                      +.+.+ ++....       +.      .....+......++|+|||+++++++ .++.|.+||+.++............ 
T Consensus       177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~-  255 (361)
T 3scy_A          177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT-  255 (361)
T ss_dssp             TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS-
T ss_pred             CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC-
Confidence            78887 443222       11      11123455678999999999887777 6899999999855332221111110 


Q ss_pred             cccceeeEEEEEcCCCceEEEecc--CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISR--DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                       .+...+..++|+|+|++|+++..  ++.|.+|++......        .+.+..+.. ...+.+++|+|+|++|++++.
T Consensus       256 -~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~--------~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~  325 (361)
T 3scy_A          256 -VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT--------LTKVGYQLT-GIHPRNFIITPNGKYLLVACR  325 (361)
T ss_dssp             -SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC--------EEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred             -CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc--------EEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence             13344679999999999876665  489999999632110        113344444 557889999999999988862


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                          .++.|.+|
T Consensus       326 ----~~~~v~v~  333 (361)
T 3scy_A          326 ----DTNVIQIF  333 (361)
T ss_dssp             ----TTTEEEEE
T ss_pred             ----CCCCEEEE
Confidence                34557775

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.91  E-value=1.8e-22  Score=179.81  Aligned_cols=236  Identities=8%  Similarity=0.038  Sum_probs=163.8

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-----Ccccc----------------------cccccC
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-----EGNYL----------------------PYHMRD   95 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-----~~~~~----------------------~~~~~~   95 (312)
                      +..+...+.+++|+|+      |+.|+++ .|+.|++|++.+     ++...                      +....+
T Consensus       116 l~~~~~~~~~~~~Spd------G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~  188 (706)
T 2z3z_A          116 LFDTNEETASLDFSPV------GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW  188 (706)
T ss_dssp             EECCTTCCTTCEECTT------SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE
T ss_pred             ccCCcccccCCcCCCC------CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE
Confidence            3445667778888888      9999885 689999999988     65421                      234557


Q ss_pred             CCCCceEEEEe---------------------------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191         96 DSKQLHLLSCS---------------------------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC  142 (312)
Q Consensus        96 ~~~~~~l~~~~---------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~  142 (312)
                      +|++.+|++++                                 .+..|++||+.+++...+.     ....+...+.++
T Consensus       189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~-----~~~~~~~~~~~~  263 (706)
T 2z3z_A          189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ-----TGEPKEKFLTNL  263 (706)
T ss_dssp             CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-----CCSCTTCEEEEE
T ss_pred             CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-----cCCCCceeEeeE
Confidence            88999999887                                 4467999999875422111     112456678999


Q ss_pred             EECCCCCeEEEeecCC-----eEEE-ecccC-ceeeeec-ccCC---ceeEEEECC--CCCEEEEEecCCeEEEEEcc-C
Q psy15191        143 KFGPRGDYIIAHGFQG-----SLHL-DVTTW-KQIQTLP-CHQL---TITQLAFSP--DDTHLVSVSRDRRWGLYKRQ-S  208 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~~-----~i~~-d~~~~-~~~~~~~-~~~~---~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~-~  208 (312)
                      +|+|+|+.|++++.++     .+.+ |..+. ....... .+..   .+..++|+|  ||+++++++.|+.+++|++. +
T Consensus       264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~  343 (706)
T 2z3z_A          264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT  343 (706)
T ss_dssp             EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT
T ss_pred             EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC
Confidence            9999999999887665     6777 77777 3332222 1222   246789999  99999999999999999887 4


Q ss_pred             CCeEEEEeccCCCCcccceeeEE-EEEcCCCceEEEec-cCC----eEEEEecCCCCCCcccccccccceeEEeeccCcc
Q psy15191        209 SGRLSLVACSDKTNGVHKRIIWG-VAWSHDSRYFLTIS-RDG----VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE  282 (312)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~-~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (312)
                      .+....+..       +...+.. ++|+|+++.|+.++ .++    .|+.||+..+.             ...+. |...
T Consensus       344 ~~~~~~l~~-------~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-------------~~~l~-~~~~  402 (706)
T 2z3z_A          344 GRLIRQVTK-------GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-------------TKDLT-PESG  402 (706)
T ss_dssp             SCEEEECCC-------SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-------------CEESC-CSSS
T ss_pred             CCEEEecCC-------CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-------------ceecc-CCCc
Confidence            454444433       4455666 79999998776554 444    66666766542             22232 5667


Q ss_pred             eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        283 IYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       283 v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +.+++|+|+|++|+..+.+.. ..+.|++|
T Consensus       403 ~~~~~~spdg~~l~~~~~~~~-~p~~i~l~  431 (706)
T 2z3z_A          403 MHRTQLSPDGSAIIDIFQSPT-VPRKVTVT  431 (706)
T ss_dssp             EEEEEECTTSSEEEEEEECSS-CSCEEEEE
T ss_pred             eEEEEECCCCCEEEEEecCCC-CCcEEEEE
Confidence            899999999999887754321 23557765

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.91  E-value=3.6e-22  Score=178.32  Aligned_cols=277  Identities=12%  Similarity=0.057  Sum_probs=180.1

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccC---cEEEEEEecCcCcCCCCceEEEecCC---------C
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKS---KVMAVKWVLNTSLDPEHKDLVSCSLD---------K   75 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~l~s~~~d---------g   75 (312)
                      +.-..+|+.+++  +..+.|  ..|+..+++....+.+|..   .|.+++|+|+      |++|++++.+         +
T Consensus        22 ~~~spdg~~~~~--~~dg~i--~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpD------g~~l~~~~~~~~~~~~~~~~   91 (723)
T 1xfd_A           22 AKWISDTEFIYR--EQKGTV--RLWNVETNTSTVLIEGKKIESLRAIRYEISPD------REYALFSYNVEPIYQHSYTG   91 (723)
T ss_dssp             CCBSSSSCBCCC--CSSSCE--EEBCGGGCCCEEEECTTTTTTTTCSEEEECTT------SSEEEEEESCCCCSSSCCCS
T ss_pred             cEEcCCCcEEEE--eCCCCE--EEEECCCCcEEEEeccccccccccceEEECCC------CCEEEEEecCccceeeccee
Confidence            333445675543  344433  4599999999888888765   4999999999      9999998764         7


Q ss_pred             cEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc--CCC--------
Q psy15191         76 TAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV--GGN--------  135 (312)
Q Consensus        76 ~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~--------  135 (312)
                      .+.+||+.+++..          .+....++|++..|+.++. +.|++||+.+++...+........  .++        
T Consensus        92 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee  170 (723)
T 1xfd_A           92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE  170 (723)
T ss_dssp             EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred             eEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence            8889999887651          1345667899999998886 789999998754332221100000  000        


Q ss_pred             -ccceeEEEECCCCCeEEEeecCC----------------------------------eEEE-ecccCceeeeeccc---
Q psy15191        136 -TLGFYGCKFGPRGDYIIAHGFQG----------------------------------SLHL-DVTTWKQIQTLPCH---  176 (312)
Q Consensus       136 -~~~v~~~~~~~~~~~l~~~~~~~----------------------------------~i~~-d~~~~~~~~~~~~~---  176 (312)
                       ...+.+++|+|||+.|++++.++                                  .+++ |+.+.+....+..+   
T Consensus       171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~  250 (723)
T 1xfd_A          171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP  250 (723)
T ss_dssp             TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG
T ss_pred             eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC
Confidence             11337899999999999887553                                  5666 66666544444433   


Q ss_pred             ---CCceeEEEECCCCCEEEEEec----CCeEEEEEccCCCeEEEEeccCCCCcccceee----EEEEEcCCCceEEE--
Q psy15191        177 ---QLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRII----WGVAWSHDSRYFLT--  243 (312)
Q Consensus       177 ---~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~s--  243 (312)
                         ...+..++|+|||+++++.+.    +..|++||+.+++....+...      +...+    ..++|+|||+.|+.  
T Consensus       251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~------~~~~~~~~~~~~~~spdg~~l~~~~  324 (723)
T 1xfd_A          251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE------SEAWLHRQNEEPVFSKDGRKFFFIR  324 (723)
T ss_dssp             GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE------CSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred             CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec------cCCEEeccCCCceEcCCCCeEEEEE
Confidence               567899999999998877653    357999999988766554432      22222    26899999998775  


Q ss_pred             eccCC------eEEEEecCCCCCCcccccccccceeEEeeccCcceeE-EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        244 ISRDG------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS-LAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       244 ~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..++      .|++||+..+....         +...+..+...+.. ++|+|||+.|+..+.+..  .+.++||
T Consensus       325 ~~~~~~~~~~~~l~~~d~~~~~~~~---------~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~l~  389 (723)
T 1xfd_A          325 AIPQGGRGKFYHITVSSSQPNSSND---------NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDL--PRRRQLY  389 (723)
T ss_dssp             EECCSSSSCEEEEEEECSSCCSSSC---------CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSC--TTCCEEE
T ss_pred             ecccCCCcceeEEEEEeccCCCCcc---------ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCC--CcceEEE
Confidence            44666      56666632222100         02223333333444 699999999987754410  1446665

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.91  E-value=2.1e-22  Score=186.42  Aligned_cols=257  Identities=10%  Similarity=-0.024  Sum_probs=190.6

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD   67 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~   67 (312)
                      .+|....+.....+.+|...+.++.|+++.                   +.....+..|. .+...+|+|+      |+.
T Consensus       186 ~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpD------G~~  258 (1045)
T 1k32_A          186 KIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTD------GRR  258 (1045)
T ss_dssp             EEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEES------SSC
T ss_pred             CEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCC------CCE
Confidence            344433334445557788888888877641                   11122333333 3567788888      888


Q ss_pred             EEEecCCCcEEEeeecCCccc------------------ccccccCC-CCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191         68 LVSCSLDKTAILWKYVSEGNY------------------LPYHMRDD-SKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        68 l~s~~~dg~i~vw~~~~~~~~------------------~~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  128 (312)
                      |+.+ .++.|.+|++......                  .+....++ |++..+++++ ++.|.+|++...+...     
T Consensus       259 la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-----  331 (1045)
T 1k32_A          259 ILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-----  331 (1045)
T ss_dssp             EEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-----
T ss_pred             EEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-----
Confidence            8887 5899999998433221                  23445567 8888888887 7899999988643211     


Q ss_pred             ecccCCCcc-ceeEEEECCCCCeEEEeecCCeEE-E-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEE
Q psy15191        129 VGEVGGNTL-GFYGCKFGPRGDYIIAHGFQGSLH-L-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK  205 (312)
Q Consensus       129 ~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~i~-~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd  205 (312)
                         +..+.. .+..++|+ +++.++.++.++.+. + +..+....... .|...+..++|+|||++|++++.++.|++||
T Consensus       332 ---~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d  406 (1045)
T 1k32_A          332 ---VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVD  406 (1045)
T ss_dssp             ---CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ---ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence               124445 78899999 999999988888888 7 66655544333 6778899999999999999999999999999


Q ss_pred             ccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC----------eEEEEecCCCCCCcccccccccceeEE
Q psy15191        206 RQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG----------VCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      +.+++.......       |...+..++|+|||++|++++.++          .|++||+..+             ....
T Consensus       407 ~~tg~~~~~~~~-------~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g-------------~~~~  466 (1045)
T 1k32_A          407 LETGKPTVIERS-------REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR-------------KIFA  466 (1045)
T ss_dssp             TTTCCEEEEEEC-------SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT-------------EEEE
T ss_pred             CCCCceEEeccC-------CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC-------------cEEE
Confidence            998877666544       666788999999999999887654          8999999876             4566


Q ss_pred             eeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      +..|...+..++|+|||++|++++.++
T Consensus       467 l~~~~~~~~~~~~spdG~~l~~~s~~~  493 (1045)
T 1k32_A          467 ATTENSHDYAPAFDADSKNLYYLSYRS  493 (1045)
T ss_dssp             CSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred             eeCCCcccCCceEcCCCCEEEEEeccc
Confidence            777888899999999999999987644

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.91  E-value=6e-22  Score=177.37  Aligned_cols=280  Identities=11%  Similarity=0.076  Sum_probs=188.9

Q ss_pred             ceEeCCCCeEEEEeccCCC---ceEEEEEeCCCCceEEEEccccCc------------------------EEEEEEecCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKS---KVMAVKWNGEGGKVLYTLTNHKSK------------------------VMAVKWVLNT   59 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~---~v~~~~w~~~~~~~~~~~~~h~~~------------------------v~~~~~~~~~   59 (312)
                      .+.-..+|+.+.......+   ......|+.++++....+..+...                        |.+++|+|+ 
T Consensus        41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD-  119 (741)
T 2ecf_A           41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD-  119 (741)
T ss_dssp             EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTT-
T ss_pred             CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC-
Confidence            3444566887776654232   233355999999888888765433                        788999998 


Q ss_pred             CcCCCCceEEEecCCCcEEEeeecCC---ccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee
Q psy15191         60 SLDPEHKDLVSCSLDKTAILWKYVSE---GNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV  129 (312)
Q Consensus        60 ~~~~~~~~l~s~~~dg~i~vw~~~~~---~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  129 (312)
                           |++|++++. +.|++||+.++   ...       .+....++|++..|+.++ ++.|++||+.+++...+.....
T Consensus       120 -----g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~  192 (741)
T 2ecf_A          120 -----AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS  192 (741)
T ss_dssp             -----SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred             -----CCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence                 999998886 89999999887   432       234455688998888887 4689999998744221111000


Q ss_pred             ccc-CC--------CccceeEEEECCCCCeEEEeecCC---------------------------------eEEE-eccc
Q psy15191        130 GEV-GG--------NTLGFYGCKFGPRGDYIIAHGFQG---------------------------------SLHL-DVTT  166 (312)
Q Consensus       130 ~~~-~~--------~~~~v~~~~~~~~~~~l~~~~~~~---------------------------------~i~~-d~~~  166 (312)
                      ... .+        ....+..++|+|||++|++++.++                                 .|.+ |+.+
T Consensus       193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~  272 (741)
T 2ecf_A          193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE  272 (741)
T ss_dssp             SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred             cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence            000 00        001247799999999999987765                                 5666 6666


Q ss_pred             -Cceeeeec--ccCCceeEEEECCCCCEEEEEec-----CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        167 -WKQIQTLP--CHQLTITQLAFSPDDTHLVSVSR-----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       167 -~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                       .+......  .|...+..++| |||++|++++.     +..|++||+.+.+....+......   ....+..++|+|||
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~---~~~~~~~~~~spdg  348 (741)
T 2ecf_A          273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT---WVPLHNSLRFLDDG  348 (741)
T ss_dssp             TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS---CCCCCSCCEECTTS
T ss_pred             CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC---cCCcCCceEECCCC
Confidence             55443332  36788999999 99999997764     567999999988776655542110   00134578999999


Q ss_pred             ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE-EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL-AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++++++.||.++||.+....            ....+..|...|..+ +|+|+|+.|+..+.+..  ...++||
T Consensus       349 ~~~~~~~~~g~~~l~~~~~~~------------~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~--~~~~~l~  409 (741)
T 2ecf_A          349 SILWSSERTGFQHLYRIDSKG------------KAAALTHGNWSVDELLAVDEKAGLAYFRAGIES--ARESQIY  409 (741)
T ss_dssp             CEEEEECTTSSCEEEEECSSS------------CEEESCCSSSCEEEEEEEETTTTEEEEEECSSC--TTCBEEE
T ss_pred             eEEEEecCCCccEEEEEcCCC------------CeeeeeecceEEEeEeEEeCCCCEEEEEEeCCC--CceEEEE
Confidence            999999999988888775321            134556677778887 59999987765543210  1146666

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=7.6e-21  Score=155.21  Aligned_cols=255  Identities=12%  Similarity=0.043  Sum_probs=182.5

Q ss_pred             CCCCeEEEEeccCCC----ceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCC
Q psy15191         11 GEGGKVLYTLTNHKS----KVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSE   85 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~----~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~   85 (312)
                      ..+++.++.......    .-.-..|+..+++.+..+... ..+..++|+|+      ++ ++++...++.|.+||..++
T Consensus        49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d------g~~l~v~~~~~~~v~~~d~~~~  121 (353)
T 3vgz_A           49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNT------TQTLWFGNTVNSAVTAIDAKTG  121 (353)
T ss_dssp             ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETT------TTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCC------CCEEEEEecCCCEEEEEeCCCC
Confidence            345665655543210    112244899999988888753 45788999998      77 4556667899999999887


Q ss_pred             cccc-----------------cccccCCCCCceEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC
Q psy15191         86 GNYL-----------------PYHMRDDSKQLHLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP  146 (312)
Q Consensus        86 ~~~~-----------------~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  146 (312)
                      +...                 +....+++++..+++++  .++.|.+||..+.+.  .....     .+...+.+++|+|
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~-----~~~~~~~~~~~s~  194 (353)
T 3vgz_A          122 EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL--KTAIQ-----NTGKMSTGLALDS  194 (353)
T ss_dssp             CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--EEEEC-----CCCTTCCCCEEET
T ss_pred             eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce--EEEec-----CCCCccceEEECC
Confidence            7521                 12234566777666665  478899999987442  22221     2334477899999


Q ss_pred             CCCeEEEeecCCeEEE-ecccCceeeeecc----cCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCC
Q psy15191        147 RGDYIIAHGFQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       147 ~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      +++.++++..++.+.+ |..+.+....+..    +...+..++|+|+++++++++. ++.|.+||..+.+....+...  
T Consensus       195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--  272 (353)
T 3vgz_A          195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP--  272 (353)
T ss_dssp             TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS--
T ss_pred             CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--
Confidence            9999999999999988 8888887766653    4556888999999998777665 499999999988877766642  


Q ss_pred             CCcccceeeEEEEEcCCCceEEE-eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLT-ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                          .   ...++|+|++++++. ...++.|.+||+.++.            .+..+.. ...+.+++|+|+|++|+.+.
T Consensus       273 ----~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~------------~~~~~~~-~~~~~~~~~s~dg~~l~v~~  332 (353)
T 3vgz_A          273 ----E---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK------------VVKTFDT-PTHPNSLALSADGKTLYVSV  332 (353)
T ss_dssp             ----S---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE------------EEEEEEC-CSEEEEEEECTTSCEEEEEE
T ss_pred             ----C---CceEEECCCCCEEEEEECCCCeEEEEECCCCe------------EEEEEec-CCCCCeEEEcCCCCEEEEEE
Confidence                1   146899999996554 4578999999988762            3444443 34678999999999777776


Q ss_pred             cC
Q psy15191        300 KA  301 (312)
Q Consensus       300 ~d  301 (312)
                      .+
T Consensus       333 ~~  334 (353)
T 3vgz_A          333 KQ  334 (353)
T ss_dssp             EC
T ss_pred             cc
Confidence            55

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=6.7e-23  Score=171.63  Aligned_cols=145  Identities=10%  Similarity=0.084  Sum_probs=115.0

Q ss_pred             CccceeEEEECCCCCeEE----EeecCCeEEE-ecccC-----ce------eeeecccCCceeEEEECCC-CCEEEEEec
Q psy15191        135 NTLGFYGCKFGPRGDYII----AHGFQGSLHL-DVTTW-----KQ------IQTLPCHQLTITQLAFSPD-DTHLVSVSR  197 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~----~~~~~~~i~~-d~~~~-----~~------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~  197 (312)
                      +...|.+++|+|++++|+    +++.|+.|++ |+.+.     +.      ...+.+|...|.+++|+|+ +.+|++++.
T Consensus        91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~  170 (434)
T 2oit_A           91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA  170 (434)
T ss_dssp             CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred             CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence            456799999999999999    7888999999 55443     11      2334468999999999997 889999999


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY  277 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  277 (312)
                      ||.|++||+++.........       |...|++++|+|+|++|++|+.||.|++||++ +.            ....+.
T Consensus       171 Dg~v~iwD~~~~~~~~~~~~-------~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~------------~~~~~~  230 (434)
T 2oit_A          171 DGSIAVLQVTETVKVCATLP-------STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ------------EKKVIP  230 (434)
T ss_dssp             TSCEEEEEESSSEEEEEEEC-------GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC------------EEEEEC
T ss_pred             CCeEEEEEcCCCcceeeccC-------CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc------------cccccc
Confidence            99999999998754433332       77889999999999999999999999999987 31            222222


Q ss_pred             c-------cCcceeEEEeccCCCeEEEEe
Q psy15191        278 G-------HGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       278 ~-------~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      .       |...|.+++|++++.++++.+
T Consensus       231 ~~~~~~~~~~~~v~~v~w~~~~~~l~~~~  259 (434)
T 2oit_A          231 CPPFYESDHPVRVLDVLWIGTYVFAIVYA  259 (434)
T ss_dssp             CCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred             CCcccCCCCceeEEEEEEecCceEEEEEc
Confidence            2       344899999999988886544

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=1.9e-22  Score=168.83  Aligned_cols=205  Identities=13%  Similarity=0.077  Sum_probs=150.6

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------------cccccccCCCCCceEE
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------------YLPYHMRDDSKQLHLL  103 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------------~~~~~~~~~~~~~~l~  103 (312)
                      ...++.++++++      +.++++++.|+ +++|+......                       ..+..+.+++++.+|+
T Consensus        36 ~~~~n~lavs~~------~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~la  108 (434)
T 2oit_A           36 KERSSLLAVSNK------YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLS  108 (434)
T ss_dssp             CSCCBCEEEETT------TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEE
T ss_pred             CCCccEEEEecC------CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEE
Confidence            346889999998      88999999888 89987532100                       1255567788888998


Q ss_pred             ----EEeCCCcEEEEcCCCCcc---ee-eeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeee
Q psy15191        104 ----SCSMDKSIIVWAPDPTTG---LW-LETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus       104 ----~~~~d~~i~i~d~~~~~~---~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~  173 (312)
                          +++.|+.|++||+.+...   .. ........+.+|...|.+++|+|+ +.+|++++.||.|++ |+++.......
T Consensus       109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~  188 (434)
T 2oit_A          109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT  188 (434)
T ss_dssp             EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred             EEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence                788999999999865300   00 000112234568899999999998 889999999999999 66666554455


Q ss_pred             cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCC----
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDG----  248 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg----  248 (312)
                      .+|...|.+++|+|+|++|++|+.||.|++||++ .+....+.........|...|.+++|++++.++++. +.||    
T Consensus       189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~  267 (434)
T 2oit_A          189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET  267 (434)
T ss_dssp             ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred             cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence            5788999999999999999999999999999998 555544443322211245689999999998887653 3443    


Q ss_pred             --eEEEEecCCCC
Q psy15191        249 --VCVVWGLGEPP  259 (312)
Q Consensus       249 --~i~iwd~~~~~  259 (312)
                        .+++|++....
T Consensus       268 ~~~v~i~~l~~~~  280 (434)
T 2oit_A          268 SPDVVMALLPKKE  280 (434)
T ss_dssp             CCEEEEEECCCTT
T ss_pred             CCceEEEEeccCC
Confidence              49999998653

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.90  E-value=4e-22  Score=178.51  Aligned_cols=230  Identities=14%  Similarity=0.062  Sum_probs=167.7

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecC-CC-----cEEEeeecCCcccc-------------------------------
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSL-DK-----TAILWKYVSEGNYL-------------------------------   89 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg-----~i~vw~~~~~~~~~-------------------------------   89 (312)
                      ...|.+++|+|+      |++|++++. |+     .|++||+.+++...                               
T Consensus        36 ~~~~~~~~~Spd------G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (741)
T 2ecf_A           36 GPTLMKPKVAPD------GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMT  109 (741)
T ss_dssp             CCCCEEEEECTT------SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCE
T ss_pred             CCCCCCceEecC------CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhcccc
Confidence            457999999999      999999998 88     89999998876421                               


Q ss_pred             -cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC
Q psy15191         90 -PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW  167 (312)
Q Consensus        90 -~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~  167 (312)
                       +....+++++.+|++++. +.|++||+.++....     ...+..+...+..++|+|||++|+.++. +.|++ |+.+.
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~-----~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g  182 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA-----VRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG  182 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS-----CCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce-----EEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC
Confidence             345567899999998887 999999998751000     1122345677999999999999998874 57777 77766


Q ss_pred             ceeeeecccCCc----------------eeEEEECCCCCEEEEEecCC--------------------------------
Q psy15191        168 KQIQTLPCHQLT----------------ITQLAFSPDDTHLVSVSRDR--------------------------------  199 (312)
Q Consensus       168 ~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~d~--------------------------------  199 (312)
                      +.......+...                +..++|+|||++|++++.|+                                
T Consensus       183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~  262 (741)
T 2ecf_A          183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ  262 (741)
T ss_dssp             EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred             CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence            555443333322                47899999999999988775                                


Q ss_pred             -eEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-----CCeEEEEecCCCCCCcccccccccce
Q psy15191        200 -RWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-----DGVCVVWGLGEPPTEEDLVQNTLWPE  272 (312)
Q Consensus       200 -~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~  272 (312)
                       .|++||+.+ .+.......     ..+...+..++| |||++|+.++.     +..|++||+.++.            .
T Consensus       263 ~~l~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~------------~  324 (741)
T 2ecf_A          263 VKLGVISPAEQAQTQWIDLG-----KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ------------Q  324 (741)
T ss_dssp             EEEEEECSSTTCCCEEECCC-----SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC------------E
T ss_pred             eEEEEEECCCCCceEEecCC-----CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc------------e
Confidence             788999887 665433221     016678999999 99999987654     5689999998763            2


Q ss_pred             eEEeeccCc----ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        273 VQKLYGHGY----EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       273 ~~~~~~~~~----~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...+..+..    .+.+++|+|||+++++++.|+     .++||
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~  363 (741)
T 2ecf_A          325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG-----FQHLY  363 (741)
T ss_dssp             EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS-----SCEEE
T ss_pred             EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC-----ccEEE
Confidence            333333332    456899999999888885544     36665

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.90  E-value=9.2e-21  Score=153.60  Aligned_cols=238  Identities=9%  Similarity=0.035  Sum_probs=169.1

Q ss_pred             EeCCCCceEEEEccccC--cEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccc-------------ccccccC
Q psy15191         32 WNGEGGKVLYTLTNHKS--KVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNY-------------LPYHMRD   95 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~   95 (312)
                      |+..+++.+..+.....  .+..++|+|+      ++.+ ++++.++.|.+||+.+++..             .+....+
T Consensus        16 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (337)
T 1pby_B           16 IDTEKMAVDKVITIADAGPTPMVPMVAPG------GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL   89 (337)
T ss_dssp             EETTTTEEEEEEECTTCTTCCCCEEECTT------SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE
T ss_pred             EECCCCcEEEEEEcCCCCCCccceEEcCC------CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEE
Confidence            88989998888864322  5889999998      7654 66677899999999887653             2223445


Q ss_pred             CCCCceEEEEe------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-
Q psy15191         96 DSKQLHLLSCS------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-  162 (312)
Q Consensus        96 ~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-  162 (312)
                      ++++.+++++.            .++.|.+||+.+.+.  .....      ....+.+++|+|++++++++  ++.+.+ 
T Consensus        90 s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--~~~~~------~~~~~~~~~~s~dg~~l~~~--~~~i~~~  159 (337)
T 1pby_B           90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAFE------APRQITMLAWARDGSKLYGL--GRDLHVM  159 (337)
T ss_dssp             CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--EEEEE------CCSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred             CCCCCEEEEEecccccccccccccCceEEEEECCCCcE--EEEEe------CCCCcceeEECCCCCEEEEe--CCeEEEE
Confidence            77887888876            579999999987432  22222      12346788999999988887  577877 


Q ss_pred             ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC------------------------eEEEEEccCCCeEEEEecc
Q psy15191        163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR------------------------RWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------~i~~wd~~~~~~~~~~~~~  218 (312)
                      |+.+.+....+..+.. ...+.|+|++..++..+..+                        .|.+||+.+.+.. .....
T Consensus       160 d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~  237 (337)
T 1pby_B          160 DPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR  237 (337)
T ss_dssp             ETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE
T ss_pred             ECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC
Confidence            8888877766653321 11337899988776554332                        4689999887664 22221


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      .     +...+.+++|+|++++|+++  ++.|++||+.++.            .+..+. ....+.+++|+|+|++|+++
T Consensus       238 ~-----~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~------------~~~~~~-~~~~~~~~~~s~dg~~l~~~  297 (337)
T 1pby_B          238 I-----MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA------------SIKRVP-LPHSYYSVNVSTDGSTVWLG  297 (337)
T ss_dssp             E-----CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE------------EEEEEE-CSSCCCEEEECTTSCEEEEE
T ss_pred             C-----CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc------------Ccceec-CCCceeeEEECCCCCEEEEE
Confidence            1     44567789999999999888  7899999987752            334443 33567899999999999998


Q ss_pred             ecCCCcccceEEeC
Q psy15191        299 CKATKPEHAAIIIW  312 (312)
Q Consensus       299 s~d~~~~dg~i~iW  312 (312)
                      +.     ++.|++|
T Consensus       298 ~~-----~~~i~v~  306 (337)
T 1pby_B          298 GA-----LGDLAAY  306 (337)
T ss_dssp             SB-----SSEEEEE
T ss_pred             cC-----CCcEEEE
Confidence            44     4558887

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.90  E-value=6e-21  Score=170.03  Aligned_cols=249  Identities=10%  Similarity=0.064  Sum_probs=167.1

Q ss_pred             EEeCCCCceE-EEEcccc-----------------CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----
Q psy15191         31 KWNGEGGKVL-YTLTNHK-----------------SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----   88 (312)
Q Consensus        31 ~w~~~~~~~~-~~~~~h~-----------------~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----   88 (312)
                      .||..+++.+ ..+..|.                 ..|.+++|+|+      +.++++.  ++.|++||+.+++..    
T Consensus        47 ~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd------~~~~~~~--~~~i~~~d~~~~~~~~l~~  118 (706)
T 2z3z_A           47 VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR------GLVVLFT--QGGLVGFDMLARKVTYLFD  118 (706)
T ss_dssp             EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT------TEEEEEE--TTEEEEEETTTTEEEEEEC
T ss_pred             EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC------CeEEEEE--CCEEEEEECCCCceEEccC
Confidence            5999998874 4444443                 56999999988      6555553  599999999887652    


Q ss_pred             ---ccccccCCCCCceEEEEeCCCcEEEEcCCC-----Ccceeeeeeeecc-------cCCCccceeEEEECCCCCeEEE
Q psy15191         89 ---LPYHMRDDSKQLHLLSCSMDKSIIVWAPDP-----TTGLWLETARVGE-------VGGNTLGFYGCKFGPRGDYIIA  153 (312)
Q Consensus        89 ---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~  153 (312)
                         .+....++|++..++++ .++.|++||+.+     ++...+.......       ...+...+.+++|+|||++|++
T Consensus       119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~  197 (706)
T 2z3z_A          119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF  197 (706)
T ss_dssp             CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred             CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence               23445568899888884 789999999987     5432211110000       0001122578999999999998


Q ss_pred             ee---------------------------------cCCeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEEec
Q psy15191        154 HG---------------------------------FQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSVSR  197 (312)
Q Consensus       154 ~~---------------------------------~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~  197 (312)
                      ++                                 .+..+.+ |+.+.+......  .|...+..++|+|||++|++++.
T Consensus       198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  277 (706)
T 2z3z_A          198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV  277 (706)
T ss_dssp             EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred             EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence            87                                 3355666 777666544332  46678999999999999999887


Q ss_pred             CC-----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC--CCceEEEeccCCeEEEEecCCCCCCccccccccc
Q psy15191        198 DR-----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH--DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW  270 (312)
Q Consensus       198 d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  270 (312)
                      ++     .|++||+.+++....+.......  ....+..++|+|  +|+++++++.|+.++||++.....          
T Consensus       278 ~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~--~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~----------  345 (706)
T 2z3z_A          278 NRAQNECKVNAYDAETGRFVRTLFVETDKH--YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR----------  345 (706)
T ss_dssp             CTTSCEEEEEEEETTTCCEEEEEEEEECSS--CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC----------
T ss_pred             CCCCCeeEEEEEECCCCceeeEEEEccCCC--eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC----------
Confidence            76     89999999874443333211100  111245789999  999999999999999998763211          


Q ss_pred             ceeEEeeccCcceeE-EEeccCCCeEEEEecC
Q psy15191        271 PEVQKLYGHGYEIYS-LAASHDGTLLASACKA  301 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~-~~~s~~~~~l~s~s~d  301 (312)
                       .+..+..|...+.. ++|+|+|+.|+.++.+
T Consensus       346 -~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~  376 (706)
T 2z3z_A          346 -LIRQVTKGEWEVTNFAGFDPKGTRLYFESTE  376 (706)
T ss_dssp             -EEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred             -EEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence             45666777777877 7999999988776543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.89  E-value=1.8e-20  Score=152.94  Aligned_cols=238  Identities=8%  Similarity=0.001  Sum_probs=169.5

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecC-------CCcEEEeeecCCcccc-------cccccCCCCCceE-EEEeCCCc
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSL-------DKTAILWKYVSEGNYL-------PYHMRDDSKQLHL-LSCSMDKS  110 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~-------dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l-~~~~~d~~  110 (312)
                      ....+..++|+|+      ++++++++.       ++.|.+||..+++...       +....+++++..+ ++...++.
T Consensus        39 ~~~~~~~~~~s~d------g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~  112 (353)
T 3vgz_A           39 VGKGAYEMAYSQQ------ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSA  112 (353)
T ss_dssp             EESSEEEEEEETT------TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTE
T ss_pred             hccCccceEECCC------CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCE
Confidence            3467889999999      888777763       5689999998876532       2233345666644 55566799


Q ss_pred             EEEEcCCCCcceeeeeeeecccC----CCccceeEEEECCCCCeEEEee--cCCeEEE-ecccCceeeeecccCCceeEE
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVG----GNTLGFYGCKFGPRGDYIIAHG--FQGSLHL-DVTTWKQIQTLPCHQLTITQL  183 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~-d~~~~~~~~~~~~~~~~v~~~  183 (312)
                      |.+||..+.+..  .........    .....+.+++|+|++++++++.  .++.|.+ |..+.+....+..+...+..+
T Consensus       113 v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~  190 (353)
T 3vgz_A          113 VTAIDAKTGEVK--GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGL  190 (353)
T ss_dssp             EEEEETTTCCEE--EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred             EEEEeCCCCeeE--EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceE
Confidence            999999885432  222211100    0112368899999999888776  4777888 988888887776566668899


Q ss_pred             EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCCCCCCc
Q psy15191        184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPTEE  262 (312)
Q Consensus       184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~  262 (312)
                      +|+|+++++++++.++.|.+||..+.+....+......   +...+..++|+|++++++.++. ++.|.+||+.++.   
T Consensus       191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---  264 (353)
T 3vgz_A          191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDG---KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN---  264 (353)
T ss_dssp             EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS---SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC---
T ss_pred             EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC---CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc---
Confidence            99999999999999999999999988777666542211   3445788999999997766654 5899999997763   


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                               .+..+....  ...++|+|+|++++.++    ..++.|.+|
T Consensus       265 ---------~~~~~~~~~--~~~~~~s~dg~~l~v~~----~~~~~v~~~  299 (353)
T 3vgz_A          265 ---------ILAKVAAPE--SLAVLFNPARNEAYVTH----RQAGKVSVI  299 (353)
T ss_dssp             ---------EEEEEECSS--CCCEEEETTTTEEEEEE----TTTTEEEEE
T ss_pred             ---------EEEEEEcCC--CceEEECCCCCEEEEEE----CCCCeEEEE
Confidence                     334443322  25799999999666554    345558876

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.89  E-value=3.8e-20  Score=149.80  Aligned_cols=240  Identities=8%  Similarity=0.015  Sum_probs=155.9

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEE--------------------eCCCCce-EEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKW--------------------NGEGGKV-LYTLTNHKSKVMAVKWVLNTSLDPEHK   66 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w--------------------~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~   66 (312)
                      +|+..+++.+..+..+...+ .++|                    +..+++. ...+..+..+..+++|+|+      ++
T Consensus        24 ~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d------g~   96 (331)
T 3u4y_A           24 FFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD------DQ   96 (331)
T ss_dssp             EEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT------SS
T ss_pred             EEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCC------CC
Confidence            56666666666555444444 5554                    4444555 5555555555555888888      89


Q ss_pred             eEEEecCCC---cEEEeeecCCcccc-------cccccCCCCCceEEEE-eCCCc-EEEEcCCCCcceeeeeeeecccCC
Q psy15191         67 DLVSCSLDK---TAILWKYVSEGNYL-------PYHMRDDSKQLHLLSC-SMDKS-IIVWAPDPTTGLWLETARVGEVGG  134 (312)
Q Consensus        67 ~l~s~~~dg---~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~  134 (312)
                      +|+++..++   .|.+||+.+++...       .....+++++.+++++ ..++. |.+|++..........  .... .
T Consensus        97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~--~~~~-~  173 (331)
T 3u4y_A           97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG--QEFI-S  173 (331)
T ss_dssp             EEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE--EEEE-C
T ss_pred             EEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC--Cccc-c
Confidence            888665553   89999998876532       2334557787755554 55588 9999988533221111  1111 2


Q ss_pred             CccceeEEEECCCCCeEEEee-cCCeEEE-ecccCce---eeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccC
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQ---IQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQS  208 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~  208 (312)
                      ....+..++|+|+++++++++ .++.+.+ |+.+.+.   ...+. ....+..++|+|||+++++++ .++.|.+||+.+
T Consensus       174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~  252 (331)
T 3u4y_A          174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS  252 (331)
T ss_dssp             SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred             CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence            334578999999999765554 6788988 8888877   65555 446778999999999776654 578899999987


Q ss_pred             CCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCC
Q psy15191        209 SGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEP  258 (312)
Q Consensus       209 ~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~  258 (312)
                      .+.  +..+................++|+|++++|+.+ ..++.|.+||+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  305 (331)
T 3u4y_A          253 GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK  305 (331)
T ss_dssp             TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred             CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence            665  222222100101111223568999999988655 45679999999775

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.89  E-value=1.6e-19  Score=148.13  Aligned_cols=266  Identities=12%  Similarity=0.053  Sum_probs=171.4

Q ss_pred             CceEEEEEeCCCCceEEE--Ec-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec-CCcccc---------cc
Q psy15191         25 SKVMAVKWNGEGGKVLYT--LT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV-SEGNYL---------PY   91 (312)
Q Consensus        25 ~~v~~~~w~~~~~~~~~~--~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~-~~~~~~---------~~   91 (312)
                      +.|..+.++++++++...  .. +....+..++|+|+      +++|++++.+ .|.+|++. +++...         ..
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spd------g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~   86 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHE------RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR   86 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTT------SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCC------CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc
Confidence            468888888888865332  21 23346888999999      8999988887 99999997 554321         22


Q ss_pred             cccCCCCCce--EEEEe-------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec
Q psy15191         92 HMRDDSKQLH--LLSCS-------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF  156 (312)
Q Consensus        92 ~~~~~~~~~~--l~~~~-------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  156 (312)
                      ...+++++.+  ++++.             .++.+.+|++... +.......... ..+...+.+++|+|+|++++++..
T Consensus        87 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~~~~spdG~~l~~~~~  164 (365)
T 1jof_A           87 ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET-GKLEKNVQNYE-YQENTGIHGMVFDPTETYLYSADL  164 (365)
T ss_dssp             GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT-CCEEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEET
T ss_pred             cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC-CcCcceEeeEE-eCCCCcceEEEECCCCCEEEEEcC
Confidence            3455778874  44553             6899999998742 11111111110 123456889999999998887654


Q ss_pred             -CCeEEE-ecc-cCceee--eec--ccCCceeEEEECCCCCEEEEEec-CCeEEEEEccC--CCeE---EEEeccCCCCc
Q psy15191        157 -QGSLHL-DVT-TWKQIQ--TLP--CHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQS--SGRL---SLVACSDKTNG  223 (312)
Q Consensus       157 -~~~i~~-d~~-~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~--~~~~---~~~~~~~~~~~  223 (312)
                       ++.|.+ ++. +.++..  .+.  .+...+..++|+|||+++++++. ++.|.+|++..  ++..   ..+........
T Consensus       165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
T 1jof_A          165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP  244 (365)
T ss_dssp             TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred             CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence             578888 665 454432  222  23567899999999999888775 68999998763  3322   11221111000


Q ss_pred             ccce------eeEEEE-EcCCCceEEEeccC-C-----eEEEEecCCCCCCcccccccccceeE-EeeccCcceeEEEec
Q psy15191        224 VHKR------IIWGVA-WSHDSRYFLTISRD-G-----VCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYGHGYEIYSLAAS  289 (312)
Q Consensus       224 ~~~~------~v~~~~-~~~~~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s  289 (312)
                      .+..      .+..++ |+|||++|++++.+ +     .|.+|++......         ..+. ....+...+..++|+
T Consensus       245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~---------~~~~~~~~~~~~~~~~~a~s  315 (365)
T 1jof_A          245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI---------EKQLFLSPTPTSGGHSNAVS  315 (365)
T ss_dssp             CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE---------EEEEEEEECSSCCTTCCCEE
T ss_pred             CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE---------EEeeeeeecCCCCcccceec
Confidence            1222      578999 99999988876643 2     8999999632110         0111 133355567889999


Q ss_pred             c---CCCeEEEEecCCCcccceEEeC
Q psy15191        290 H---DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       290 ~---~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |   +|++|++++.+    ++.|.+|
T Consensus       316 p~~~dg~~l~v~~~~----~~~v~v~  337 (365)
T 1jof_A          316 PCPWSDEWMAITDDQ----EGWLEIY  337 (365)
T ss_dssp             ECTTCTTEEEEECSS----SCEEEEE
T ss_pred             CCCcCCCEEEEEEcC----CCeEEEE
Confidence            9   89999999632    3558876

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.89  E-value=3.7e-20  Score=150.43  Aligned_cols=227  Identities=10%  Similarity=0.116  Sum_probs=147.7

Q ss_pred             ceEEEecCCCcEEEeeecC-Ccc---------cccccccCCCCCceEEEEeCC-CcEEEEcCC--CCcceeeeeeeeccc
Q psy15191         66 KDLVSCSLDKTAILWKYVS-EGN---------YLPYHMRDDSKQLHLLSCSMD-KSIIVWAPD--PTTGLWLETARVGEV  132 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~-~~~---------~~~~~~~~~~~~~~l~~~~~d-~~i~i~d~~--~~~~~~~~~~~~~~~  132 (312)
                      .++++++.|+.|++|++.. +..         ..+..+.+++++.++++++.+ +.|.+|++.  +++...+....    
T Consensus         6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~----   81 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA----   81 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE----
T ss_pred             EEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc----
Confidence            3455558899999999963 221         133445567888888888876 899999998  33322222222    


Q ss_pred             CCCccceeEEEECCCCCeEEEeec-CCeEEE-ec---ccCceeeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEc
Q psy15191        133 GGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL-DV---TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKR  206 (312)
Q Consensus       133 ~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~  206 (312)
                       .+. .+..++|+|+++++++++. ++.+.+ |+   .+.+....+. ....+.+++|+|+++++++++ .++.|++||+
T Consensus        82 -~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~  158 (343)
T 1ri6_A           82 -LPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTV  158 (343)
T ss_dssp             -CSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             -cCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence             222 6788999999998877665 788888 55   3333333333 334688999999999888877 8999999999


Q ss_pred             cCCCeEEEEe---ccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeecc---
Q psy15191        207 QSSGRLSLVA---CSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH---  279 (312)
Q Consensus       207 ~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---  279 (312)
                      .+...+....   ....    ....+..++|+|++++|+.+ ..++.|.+|++.........     ......+...   
T Consensus       159 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-----~~~~~~~~~~~~~  229 (343)
T 1ri6_A          159 SDDGHLVAQDPAEVTTV----EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-----VQTLDMMPENFSD  229 (343)
T ss_dssp             CTTSCEEEEEEEEEECS----TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-----EEEEECSCTTCCS
T ss_pred             cCCCceeeecccccccC----CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-----EeeccccCccccc
Confidence            8733332211   1100    33457789999999977554 58899999999642211000     0011111111   


Q ss_pred             CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        280 GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       280 ~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...+.+++|+|+|++|+.+.    ..++.|++|
T Consensus       230 ~~~~~~i~~s~dg~~l~v~~----~~~~~i~v~  258 (343)
T 1ri6_A          230 TRWAADIHITPDGRHLYACD----RTASLITVF  258 (343)
T ss_dssp             CCCEEEEEECTTSSEEEEEE----TTTTEEEEE
T ss_pred             cCCccceEECCCCCEEEEEe----cCCCEEEEE
Confidence            23567899999998887553    345568887

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.89  E-value=8.1e-22  Score=176.07  Aligned_cols=224  Identities=11%  Similarity=0.031  Sum_probs=158.2

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCC---------
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMD---------  108 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d---------  108 (312)
                      .+.+++|+|+      |+++++ +.||+|++||+.+++..           .+....++|++.+|++++.+         
T Consensus        18 ~~~~~~~spd------g~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~   90 (723)
T 1xfd_A           18 HDPEAKWISD------TEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT   90 (723)
T ss_dssp             CCCCCCBSSS------SCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred             cccccEEcCC------CcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence            4667788888      887766 78999999999887652           14456678999999998775         


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc--------
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT--------  179 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~--------  179 (312)
                      +.+.+||+.+++...     +.....+...+..++|+|||+.|+.++. +.|++ |..+.+.......+...        
T Consensus        91 ~~i~~~d~~~~~~~~-----l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~  164 (723)
T 1xfd_A           91 GYYVLSKIPHGDPQS-----LDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD  164 (723)
T ss_dssp             SEEEEEESSSCCCEE-----CCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred             eeEEEEECCCCceEe-----ccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence            778899998855311     1122344555888999999999998876 67887 66666555444433332        


Q ss_pred             ----------eeEEEECCCCCEEEEEecCC----------------------------------eEEEEEccCCCeEEEE
Q psy15191        180 ----------ITQLAFSPDDTHLVSVSRDR----------------------------------RWGLYKRQSSGRLSLV  215 (312)
Q Consensus       180 ----------v~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~  215 (312)
                                +..++|+|||++|++++.|+                                  .|++||+.+.+....+
T Consensus       165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l  244 (723)
T 1xfd_A          165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM  244 (723)
T ss_dssp             HHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred             eeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence                      37899999999999987653                                  7899999877654444


Q ss_pred             eccCCCCcccceeeEEEEEcCCCceEEEecc----CCeEEEEecCCCCCCcccccccccceeEEeec-cCcce----eEE
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISR----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEI----YSL  286 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v----~~~  286 (312)
                      ..... ...+...+..++|+|||++|++.+.    +..|++||+.++.            ....+.. +...+    ..+
T Consensus       245 ~~~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~------------~~~~~~~~~~~~~~~~~~~~  311 (723)
T 1xfd_A          245 MPPDD-PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV------------CTKKHEDESEAWLHRQNEEP  311 (723)
T ss_dssp             CCCCC-GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC------------EEEEEEEECSSCCCCCCCCC
T ss_pred             eCCcc-CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc------------ceEEEEeccCCEEeccCCCc
Confidence            32111 1113667899999999999877653    3579999998763            2233322 33444    378


Q ss_pred             EeccCCCeEEEE
Q psy15191        287 AASHDGTLLASA  298 (312)
Q Consensus       287 ~~s~~~~~l~s~  298 (312)
                      +|+|||+.|+..
T Consensus       312 ~~spdg~~l~~~  323 (723)
T 1xfd_A          312 VFSKDGRKFFFI  323 (723)
T ss_dssp             EECTTSCSEEEE
T ss_pred             eEcCCCCeEEEE
Confidence            999999988865

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.88  E-value=8.4e-21  Score=150.82  Aligned_cols=206  Identities=16%  Similarity=0.146  Sum_probs=147.6

Q ss_pred             EecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCC-CcceeeeeeeecccCCCccceeE
Q psy15191         70 SCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDP-TTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        70 s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      +++.|+.|++||+.+++..       .+....+++++.++++++ ++.|++||+.+ .+...+..      ..+...+.+
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~   89 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT------GFATICNND   89 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC------TTCCCBCSC
T ss_pred             CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc------ccccccccc
Confidence            4567899999999887652       344556688888888876 78999999987 54322111      122466888


Q ss_pred             EEECCCCCeEEEeec--CC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEE-EEecCCeEEEEEccCC-CeEEE
Q psy15191        142 CKFGPRGDYIIAHGF--QG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSS-GRLSL  214 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~--~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~-~~~~~  214 (312)
                      ++|+|+++++++++.  ++  .+.. +..+... ..+. +...+..++|+|++++|+ +++.++.+++|++... .....
T Consensus        90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~  167 (297)
T 2ojh_A           90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR  167 (297)
T ss_dssp             CEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred             eEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence            999999999999883  33  3444 5554442 2333 333588999999999887 7788999999997532 22222


Q ss_pred             EeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      +..       +...+.+++|+|++++|+.++ .++.+++|++.....           .+..+..|...+..++|+|+|+
T Consensus       168 ~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~s~dg~  229 (297)
T 2ojh_A          168 LTH-------GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-----------SVERITDSAYGDWFPHPSPSGD  229 (297)
T ss_dssp             CCC-------SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----------CEEECCCCSEEEEEEEECTTSS
T ss_pred             ccc-------CCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----------CcEEEecCCcccCCeEECCCCC
Confidence            222       566789999999999887665 588999998863321           4566777888899999999999


Q ss_pred             eEEEEecCC
Q psy15191        294 LLASACKAT  302 (312)
Q Consensus       294 ~l~s~s~d~  302 (312)
                      +|++++.++
T Consensus       230 ~l~~~~~~~  238 (297)
T 2ojh_A          230 KVVFVSYDA  238 (297)
T ss_dssp             EEEEEEEET
T ss_pred             EEEEEEcCC
Confidence            999987653

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.88  E-value=6.3e-21  Score=166.14  Aligned_cols=222  Identities=7%  Similarity=-0.072  Sum_probs=154.8

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecC-CCcEEEeeecCCccc--------ccccccCCCCCceEEEEeC---CCcEEEE
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSM---DKSIIVW  114 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~---d~~i~i~  114 (312)
                      ..+|++++|+|+      |+.||+++. ||+++||++..++..        .+....++|+ ..+++++.   +....+|
T Consensus        21 ~~~~~~~~~~~D------G~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~   93 (582)
T 3o4h_A           21 AVEKYSLQGVVD------GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF   93 (582)
T ss_dssp             HSCEEEEEEEET------TTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred             ccchheeecCCC------CCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence            568999999999      999999887 999999999766542        2233345666 56666664   4555665


Q ss_pred             cCCC--CcceeeeeeeecccCCCccceeEEEECCCCCe--EEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCC
Q psy15191        115 APDP--TTGLWLETARVGEVGGNTLGFYGCKFGPRGDY--IIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       115 d~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      .+..  .....    ....    ...+...+|+|+++.  ++++..++...+|+.+.+...... +..  .+++|+|||+
T Consensus        94 ~~~~~~~g~~~----~l~~----~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~  162 (582)
T 3o4h_A           94 KVNTSRPGEEQ----RLEA----VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGD  162 (582)
T ss_dssp             EEETTSTTCCE----ECTT----SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETT
T ss_pred             EEeccCCCccc----cccC----CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCC
Confidence            5433  21111    1111    112335678887764  444445555533777666554443 333  8899999999


Q ss_pred             EEEEEecC----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--eEEEEecCCCCCCccc
Q psy15191        191 HLVSVSRD----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--VCVVWGLGEPPTEEDL  264 (312)
Q Consensus       191 ~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~  264 (312)
                      +|++++.+    +.|++||+.+++... +..       +...+..++|+|||++|+++..++  .|++||+.++.     
T Consensus       163 ~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~-------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~-----  229 (582)
T 3o4h_A          163 LIAGLGFFGGGRVSLFTSNLSSGGLRV-FDS-------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS-----  229 (582)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCCEE-ECC-------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC-----
T ss_pred             EEEEEEEcCCCCeEEEEEcCCCCCceE-eec-------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc-----
Confidence            99988877    789999998776543 332       667789999999999999888888  89999998763     


Q ss_pred             ccccccceeEEeeccCcceeEEE--------eccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLA--------ASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                             .. .+.+|...+..++        |+|||.++++++.|     |.+++|
T Consensus       230 -------~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-----g~~~l~  272 (582)
T 3o4h_A          230 -------VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE-----GRSAVF  272 (582)
T ss_dssp             -------EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET-----TEEEEE
T ss_pred             -------EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC-----CcEEEE
Confidence                   23 5667777777777        99999888888554     448887

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.87  E-value=8.1e-20  Score=148.82  Aligned_cols=225  Identities=11%  Similarity=0.056  Sum_probs=152.7

Q ss_pred             CCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceE-EEEeCCCcEEEEcCCCCcceeeeeeeecc
Q psy15191         62 DPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGE  131 (312)
Q Consensus        62 ~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  131 (312)
                      ++++.++++++.+++|.+||..+++..         .+....+++++..+ ++...++.|.+||+.+.+..  .......
T Consensus         8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~--~~~~~~~   85 (349)
T 1jmx_B            8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT--FHANLSS   85 (349)
T ss_dssp             CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEEESCC
T ss_pred             cCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE--EEEEccc
Confidence            344889999999999999999887652         12333446777655 45567899999999875432  2222110


Q ss_pred             cC-CCccceeEEEECCCCCeEEEeecC------------CeEEE-ecccCceee---eecccCCceeEEEECCCCCEEEE
Q psy15191        132 VG-GNTLGFYGCKFGPRGDYIIAHGFQ------------GSLHL-DVTTWKQIQ---TLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       132 ~~-~~~~~v~~~~~~~~~~~l~~~~~~------------~~i~~-d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      .. .....+..++|+|+++++++++.+            +.+.+ |+.+.+...   ... +...+.+++|+|+|+ +++
T Consensus        86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~  163 (349)
T 1jmx_B           86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV  163 (349)
T ss_dssp             STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE
T ss_pred             ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEE
Confidence            00 002346789999999999998865            88888 777644332   232 445688999999999 555


Q ss_pred             EecCCeEEEEEccCCCeEEEEeccCCCCc---------------------------------------------------
Q psy15191        195 VSRDRRWGLYKRQSSGRLSLVACSDKTNG---------------------------------------------------  223 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~---------------------------------------------------  223 (312)
                      ++.  .|++||+.+.+....+........                                                   
T Consensus       164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  241 (349)
T 1jmx_B          164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK  241 (349)
T ss_dssp             ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred             ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence            543  499999988877665543210000                                                   


Q ss_pred             ----------ccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        224 ----------VHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       224 ----------~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                                .+...+..++|+| ++++++++  ++.|.+||+.++.            .+..+. ....+.+++|+|+|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~------------~~~~~~-~~~~~~~~~~s~dg  306 (349)
T 1jmx_B          242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK------------LIKAAN-LDHTYYCVAFDKKG  306 (349)
T ss_dssp             TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE------------EEEEEE-CSSCCCEEEECSSS
T ss_pred             CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe------------EEEEEc-CCCCccceEECCCC
Confidence                      0011355778889 99999888  8899999998762            333443 33457899999999


Q ss_pred             CeEEEEecCCCcccceEEeC
Q psy15191        293 TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       293 ~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++|++++     .++.|++|
T Consensus       307 ~~l~~~~-----~~~~v~v~  321 (349)
T 1jmx_B          307 DKLYLGG-----TFNDLAVF  321 (349)
T ss_dssp             SCEEEES-----BSSEEEEE
T ss_pred             CEEEEec-----CCCeEEEE
Confidence            9999884     44559887

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.87  E-value=3.7e-20  Score=171.42  Aligned_cols=241  Identities=11%  Similarity=0.109  Sum_probs=175.7

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC--ccc------ccccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE--GNY------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~--~~~------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      .....+.+|...+.++.|+++       .++++++.|+.++||.+...  ...      ......+++++..++.+ .++
T Consensus       194 ~~~~~l~~~~~~v~~~~~s~d-------~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~-~~~  265 (1045)
T 1k32_A          194 GAFKKIVDMSTHVSSPVIVGH-------RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFS-KGG  265 (1045)
T ss_dssp             TEEEEEECCSSCCEEEEEETT-------EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEE-ETT
T ss_pred             CCeEECcCCCCcccceEEeCC-------EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEE-eCC
Confidence            344556889999999999876       57778888999999987642  211      11223456777778777 589


Q ss_pred             cEEEEcCCCCcceeeeeeeec------ccCCCccceeEEEEC-CCCCeEEEeecCCeEEE-ecccCceeeeecccCC-ce
Q psy15191        110 SIIVWAPDPTTGLWLETARVG------EVGGNTLGFYGCKFG-PRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL-TI  180 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~-~v  180 (312)
                      .|.+|++....   +......      ....+...+.+++|+ |+|+.+++++ ++.+.+ +..+..... +..|.. .+
T Consensus       266 ~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~  340 (1045)
T 1k32_A          266 SIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRY  340 (1045)
T ss_dssp             EEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEE
T ss_pred             EEEEecCCceE---eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceE
Confidence            99999984322   1111100      000133468899999 9999999887 677777 655554433 445666 89


Q ss_pred             eEEEECCCCCEEEEEecCCeEE-EEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        181 TQLAFSPDDTHLVSVSRDRRWG-LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~d~~i~-~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ..++|+ ||+.|++++.++.+. +||+......... .       +...+..++|+|+|++|++++.++.|++||+.++.
T Consensus       341 ~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~-------~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~  411 (1045)
T 1k32_A          341 VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-E-------NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK  411 (1045)
T ss_dssp             EEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-C-------CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred             EeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-C-------CccceeeeEECCCCCEEEEECCCCeEEEEECCCCc
Confidence            999999 999999999888888 9998866543322 2       66678999999999999999999999999998763


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC-----CcccceEEeC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT-----KPEHAAIIIW  312 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~-----~~~dg~i~iW  312 (312)
                                  ....+.+|...+.+++|||||++|++++.++     ...++.|++|
T Consensus       412 ------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~  457 (1045)
T 1k32_A          412 ------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY  457 (1045)
T ss_dssp             ------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred             ------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence                        3444557889999999999999999987643     1134578887

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.86  E-value=2.6e-20  Score=166.29  Aligned_cols=266  Identities=11%  Similarity=0.032  Sum_probs=169.6

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccC---cEEEEEEecCcCcCCCCceEEEecC---------C
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKS---KVMAVKWVLNTSLDPEHKDLVSCSL---------D   74 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~l~s~~~---------d   74 (312)
                      .-|.+ +|+.+..-  ..+.|  ..|+..+++....+.+|..   .+.+++|+|+      |++|++++.         |
T Consensus        21 ~~~s~-dg~~~~~~--~d~~i--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpD------g~~la~~~~~~~~~~~s~~   89 (719)
T 1z68_A           21 PNWIS-GQEYLHQS--ADNNI--VLYNIETGQSYTILSNRTMKSVNASNYGLSPD------RQFVYLESDYSKLWRYSYT   89 (719)
T ss_dssp             CEESS-SSEEEEEC--TTSCE--EEEESSSCCEEEEECHHHHHTTTCSEEEECTT------SSEEEEEEEEEECSSSCEE
T ss_pred             cEECC-CCeEEEEc--CCCCE--EEEEcCCCcEEEEEccccccccceeeEEECCC------CCeEEEEecCceeEEeecc
Confidence            34544 45655443  23343  3499999998888877654   4899999999      999998876         7


Q ss_pred             CcEEEeeecCCcc---c----ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec--ccCCCc---------
Q psy15191         75 KTAILWKYVSEGN---Y----LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG--EVGGNT---------  136 (312)
Q Consensus        75 g~i~vw~~~~~~~---~----~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~---------  136 (312)
                      +.|++||+.+++.   .    .+....++|++..|+.+. ++.|++|++.+++...+......  .+.++.         
T Consensus        90 ~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~  168 (719)
T 1z68_A           90 ATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML  168 (719)
T ss_dssp             EEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred             eEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence            8999999988776   2    234456789999988885 78999999987543221110000  000111         


Q ss_pred             cceeEEEECCCCCeEEEeecCC----------------------------------eEEE-ecccCcee--------eee
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQG----------------------------------SLHL-DVTTWKQI--------QTL  173 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~----------------------------------~i~~-d~~~~~~~--------~~~  173 (312)
                      ....+++|+|||+.|+.++.+.                                  .+++ |+.+.+..        ..+
T Consensus       169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~  248 (719)
T 1z68_A          169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI  248 (719)
T ss_dssp             CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred             cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence            1124799999999999887652                                  5556 66555432        112


Q ss_pred             cccCCceeEEEECCCCCEEEEEecC----CeEEEEE----ccCCCeEEEEeccCCCCcccceeeE-----EEEEcCCCce
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVSRD----RRWGLYK----RQSSGRLSLVACSDKTNGVHKRIIW-----GVAWSHDSRY  240 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd----~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~  240 (312)
                      .+|...+..++|+||++++++....    ..|.+||    +.+++....+...   ...+...+.     .++|+|||+.
T Consensus       249 ~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~  325 (719)
T 1z68_A          249 ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHI---EESRTGWAGGFFVSTPVFSYDAIS  325 (719)
T ss_dssp             HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEE---EECSSSCSSSSSCCCCEECTTSSC
T ss_pred             CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecc---cccCCceEccccCCccEECCCCCe
Confidence            3577889999999998777764432    2488888    6554332222100   001344444     6899999996


Q ss_pred             EEE--eccCC--eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        241 FLT--ISRDG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       241 l~s--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      |+.  +..+|  .|++||+..+             ....+..+...+..+.++ +++.|+..+.+
T Consensus       326 l~~~~~~~~g~~~l~~~~~~~~-------------~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~  376 (719)
T 1z68_A          326 YYKIFSDKDGYKHIHYIKDTVE-------------NAIQITSGKWEAINIFRV-TQDSLFYSSNE  376 (719)
T ss_dssp             EEEEEECTTSCEEEEEESSCST-------------TCEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred             EEEEEEccCCceEEEEEECCCC-------------ceEecccCceEEEEEEEE-eCCEEEEEEec
Confidence            654  44555  5666776554             233444555667777777 88777776543

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.86  E-value=8.1e-20  Score=151.15  Aligned_cols=258  Identities=9%  Similarity=-0.040  Sum_probs=161.3

Q ss_pred             CCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH   92 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~   92 (312)
                      +|+.+.......+...-..|+.++++......++...+..+.|+|+      ++.|+.++.++.|++||+.+++...+..
T Consensus        46 Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spd------g~~l~~~~~~~~l~~~d~~~g~~~~~~~  119 (388)
T 3pe7_A           46 DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPD------DDALFYVKDGRNLMRVDLATLEENVVYQ  119 (388)
T ss_dssp             TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTT------SSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCC------CCEEEEEeCCCeEEEEECCCCcceeeee
Confidence            3444444433233322233566666666555556555556778888      9999999999999999999887532211


Q ss_pred             c----------cCCCCCceEEEE----------------------eCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191         93 M----------RDDSKQLHLLSC----------------------SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY  140 (312)
Q Consensus        93 ~----------~~~~~~~~l~~~----------------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~  140 (312)
                      .          ..++++..++..                      ..+..|.+||+.+++...+.        .+...+.
T Consensus       120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~--------~~~~~~~  191 (388)
T 3pe7_A          120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL--------QENQWLG  191 (388)
T ss_dssp             CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE--------EESSCEE
T ss_pred             chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee--------cCCcccc
Confidence            1          124566565532                      23467899999875433221        2334578


Q ss_pred             EEEECC-CCCeEEEeecC------CeEEE-ecccCceeeeecccC-CceeEEEECCCCCEEEEEec-CC----eEEEEEc
Q psy15191        141 GCKFGP-RGDYIIAHGFQ------GSLHL-DVTTWKQIQTLPCHQ-LTITQLAFSPDDTHLVSVSR-DR----RWGLYKR  206 (312)
Q Consensus       141 ~~~~~~-~~~~l~~~~~~------~~i~~-d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-d~----~i~~wd~  206 (312)
                      .++|+| +++.|+....+      ..+.+ |....+......... ..+..++|+|||+.|+..+. ++    .|++||+
T Consensus       192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~  271 (388)
T 3pe7_A          192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP  271 (388)
T ss_dssp             EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred             ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence            899999 99988877653      25666 655444333222222 35788999999998766543 22    3999999


Q ss_pred             cCCCeEEEEeccCCCCcccc-eeeEEEEEcCCCceEEEe---------ccCCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191        207 QSSGRLSLVACSDKTNGVHK-RIIWGVAWSHDSRYFLTI---------SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL  276 (312)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  276 (312)
                      .+++...........   +. .....++|+|||+.|+..         ..+..|++||+..+             .+..+
T Consensus       272 ~~g~~~~l~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~-------------~~~~l  335 (388)
T 3pe7_A          272 ETLENRQLTSMPACS---HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG-------------TQHRV  335 (388)
T ss_dssp             TTCCEEEEEEECCEE---EEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT-------------EEEEE
T ss_pred             CCCceEEEEcCCCce---eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC-------------ceEEe
Confidence            987754433321100   00 001123799999988754         44568999999876             34555


Q ss_pred             eccCc-----------ceeEEEeccCCCeEEEEec
Q psy15191        277 YGHGY-----------EIYSLAASHDGTLLASACK  300 (312)
Q Consensus       277 ~~~~~-----------~v~~~~~s~~~~~l~s~s~  300 (312)
                      ..+..           .+.+++|+|||+.|+..+.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~  370 (388)
T 3pe7_A          336 ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD  370 (388)
T ss_dssp             EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             ccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence            55555           5788999999999888764

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.85  E-value=6.6e-20  Score=159.75  Aligned_cols=246  Identities=14%  Similarity=0.118  Sum_probs=164.6

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCCceEEEEcccc-CcEEEEEEecCcCcCCCCceEEEecC---CCcEEEeeecC--
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHK-SKVMAVKWVLNTSLDPEHKDLVSCSL---DKTAILWKYVS--   84 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~--   84 (312)
                      ..+|+.+.......+.+ .+ |+.++++. ..+..|. ..+..++|+|+       +++++++.   +...++|.+..  
T Consensus        30 ~~DG~~la~~s~~~g~~-~l-w~~~~g~~-~~lt~~~~~~~~~~~~spd-------~~l~~~~~~~g~~~~~l~~~~~~~   99 (582)
T 3o4h_A           30 VVDGDKLLVVGFSEGSV-NA-YLYDGGET-VKLNREPINSVLDPHYGVG-------RVILVRDVSKGAEQHALFKVNTSR   99 (582)
T ss_dssp             EETTTEEEEEEEETTEE-EE-EEEETTEE-EECCSSCCSEECEECTTCS-------EEEEEEECSTTSCCEEEEEEETTS
T ss_pred             CCCCCeEEEEEccCCce-eE-EEEcCCCc-EeeecccccccccccCCCC-------eEEEEeccCCCCcceEEEEEeccC
Confidence            34677776554323322 22 77766655 4455555 68999998876       57776664   55667766644  


Q ss_pred             C-ccc------ccccccCCCCCc-eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec
Q psy15191         85 E-GNY------LPYHMRDDSKQL-HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF  156 (312)
Q Consensus        85 ~-~~~------~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  156 (312)
                      . ...      ......+++++. .+++.+.++.+.+||+.+++...+..        +..  .+++|+|||+++++++.
T Consensus       100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--------~~~--~~~~~spDG~~la~~~~  169 (582)
T 3o4h_A          100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--------LPG--FGFVSDIRGDLIAGLGF  169 (582)
T ss_dssp             TTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--------ESS--CEEEEEEETTEEEEEEE
T ss_pred             CCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--------CCC--ceEEECCCCCEEEEEEE
Confidence            2 111      111223344443 23344444556699998754332221        111  78899999999998877


Q ss_pred             C----CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191        157 Q----GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQSSGRLSLVACSDKTNGVHKRII  229 (312)
Q Consensus       157 ~----~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v  229 (312)
                      +    +.|++ |+.+.+.. .+..|...+..++|+|||+.|+++..++  .|++||+.+++.. .+..       +...+
T Consensus       170 ~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-------~~~~~  240 (582)
T 3o4h_A          170 FGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL-------PSKDF  240 (582)
T ss_dssp             EETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC-------SCSHH
T ss_pred             cCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC-------CCcCh
Confidence            6    66777 77776655 5567888899999999999999888888  8999999887765 3332       33334


Q ss_pred             EEEE--------EcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191        230 WGVA--------WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       230 ~~~~--------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                      ..++        |+|||.++++++.|+.+++|++  +.            ...   .+.+.|.+++|+ +++++++++.+
T Consensus       241 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~------------~~~---~~~~~v~~~~~s-dg~~l~~~s~~  302 (582)
T 3o4h_A          241 SSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE------------RVE---APQGNHGRVVLW-RGKLVTSHTSL  302 (582)
T ss_dssp             HHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE------------EEC---CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred             hhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC------------eec---cCCCceEEEEec-CCEEEEEEcCC
Confidence            4445        9999998999999999999998  31            222   234678899999 99999998766


Q ss_pred             CC
Q psy15191        302 TK  303 (312)
Q Consensus       302 ~~  303 (312)
                      ..
T Consensus       303 ~~  304 (582)
T 3o4h_A          303 ST  304 (582)
T ss_dssp             TE
T ss_pred             CC
Confidence            43

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.85  E-value=3.9e-18  Score=138.94  Aligned_cols=211  Identities=11%  Similarity=0.073  Sum_probs=137.6

Q ss_pred             EeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEEEeeecCCcc---cc----------------
Q psy15191         32 WNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKYVSEGN---YL----------------   89 (312)
Q Consensus        32 w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~---~~----------------   89 (312)
                      |+.++++  .+..+..+...+..++|+|+      +++|++++ .++.|.+|++.....   ..                
T Consensus        68 ~~~~~g~~~~~~~~~~~~~~p~~~a~spd------g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~  141 (347)
T 3hfq_A           68 WQIDGQTAHKLNTVVAPGTPPAYVAVDEA------RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS  141 (347)
T ss_dssp             EEEETTEEEEEEEEEEESCCCSEEEEETT------TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred             EEecCCcEEEeeeeecCCCCCEEEEECCC------CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence            5555444  44555567788899999999      88888777 789999999963221   10                


Q ss_pred             -cccccCCCCCceEEEEeCCCcEEEEcCC-CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE-ecc
Q psy15191         90 -PYHMRDDSKQLHLLSCSMDKSIIVWAPD-PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL-DVT  165 (312)
Q Consensus        90 -~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~  165 (312)
                       +....+++++.++++...++.|.+|++. +++........    ......+..++|+|+|++++++ ..++.+.+ +..
T Consensus       142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~----~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~  217 (347)
T 3hfq_A          142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT----MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD  217 (347)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE----CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE----cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence             2224567788766666778899999998 32222111111    1122356789999999976664 56778887 433


Q ss_pred             --cCce--eeeecccC------CceeEEEECCCCCEEE-EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        166 --TWKQ--IQTLPCHQ------LTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       166 --~~~~--~~~~~~~~------~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                        +.++  ........      ..+..++|+|||++|+ +...++.|.+|++........+.....    +...+..++|
T Consensus       218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~----~~~~~~~~~~  293 (347)
T 3hfq_A          218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST----EGDFPRDFDL  293 (347)
T ss_dssp             TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC----SSSCCCEEEE
T ss_pred             CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec----CCCCcCeEEE
Confidence              2332  12222111      4588999999999875 455689999999974322222211100    3445778999


Q ss_pred             cCCCceEEEecc-CCeEEEEecC
Q psy15191        235 SHDSRYFLTISR-DGVCVVWGLG  256 (312)
Q Consensus       235 ~~~~~~l~s~~~-dg~i~iwd~~  256 (312)
                      +|+|++|++++. ++.|.+|++.
T Consensus       294 spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          294 DPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCCCCEEEEEEcCCCcEEEEEEe
Confidence            999998887765 5899999664

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.85  E-value=2.8e-17  Score=134.68  Aligned_cols=237  Identities=15%  Similarity=0.172  Sum_probs=150.5

Q ss_pred             CCceEeCCCCeEEEEecc---CCCceEEEEEeCCCCce--EEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEE
Q psy15191          5 PGDVVNGEGGKVLYTLTN---HKSKVMAVKWNGEGGKV--LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAI   78 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~---h~~~v~~~~w~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~   78 (312)
                      |..+....+|+.++....   ..+.|....++.++++.  +.....+......+++  +      +++|++++ .++.|.
T Consensus        52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d------g~~l~~~~~~~~~v~  123 (361)
T 3scy_A           52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N------GKNIVTANYSGGSIT  123 (361)
T ss_dssp             CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C------SSEEEEEETTTTEEE
T ss_pred             CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C------CCEEEEEECCCCEEE
Confidence            444555566777776665   34566555566655543  3344445566777777  5      56666554 688999


Q ss_pred             EeeecCCcccc----------------------cccccCCCCCceEEEEe-CCCcEEEEcCCCCcc----e-eeee--ee
Q psy15191         79 LWKYVSEGNYL----------------------PYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTG----L-WLET--AR  128 (312)
Q Consensus        79 vw~~~~~~~~~----------------------~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~----~-~~~~--~~  128 (312)
                      +|++.......                      +....+++++.++++++ .++.|.+|++.....    . ....  ..
T Consensus       124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~  203 (361)
T 3scy_A          124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE  203 (361)
T ss_dssp             EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred             EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence            99997543311                      02255678887665554 578999998876443    1 1110  01


Q ss_pred             ecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCcee--eeec---ccCCceeEEEECCCCCEEEEEecC--C
Q psy15191        129 VGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQI--QTLP---CHQLTITQLAFSPDDTHLVSVSRD--R  199 (312)
Q Consensus       129 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~--~~~~---~~~~~v~~~~~~~~~~~l~~~~~d--~  199 (312)
                      ... ......+..++|+|+|++++++. .++.|.+ ++.+..+.  ....   .+......++|+|||++|+++..+  +
T Consensus       204 ~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~  282 (361)
T 3scy_A          204 AFK-VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD  282 (361)
T ss_dssp             EEE-CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred             cee-cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence            111 12344578899999999888777 5888888 65544332  2221   233456799999999998776654  8


Q ss_pred             eEEEEEcc--CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecC
Q psy15191        200 RWGLYKRQ--SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLG  256 (312)
Q Consensus       200 ~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~  256 (312)
                      .|.+|++.  +++........      ....+..++|+|+|++|++++ .++.|.+|++.
T Consensus       283 ~i~v~~~~~~~g~~~~~~~~~------~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d  336 (361)
T 3scy_A          283 GVAIFKVDETNGTLTKVGYQL------TGIHPRNFIITPNGKYLLVACRDTNVIQIFERD  336 (361)
T ss_dssp             EEEEEEECTTTCCEEEEEEEE------CSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred             EEEEEEEcCCCCcEEEeeEec------CCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence            99999996  23321111111      123467899999999888877 67899997665

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.83  E-value=3e-18  Score=138.75  Aligned_cols=202  Identities=11%  Similarity=0.023  Sum_probs=142.5

Q ss_pred             EeCCCCceEEEEcc-c----cCcEEEEEEecCcCcCCCCceEEEec------------CCCcEEEeeecCCccc------
Q psy15191         32 WNGEGGKVLYTLTN-H----KSKVMAVKWVLNTSLDPEHKDLVSCS------------LDKTAILWKYVSEGNY------   88 (312)
Q Consensus        32 w~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~~~~~~l~s~~------------~dg~i~vw~~~~~~~~------   88 (312)
                      |+..+++.+..+.. +    ...+..++|+|+      +++|++++            .++.|.+||+.+++..      
T Consensus        61 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~  134 (337)
T 1pby_B           61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPD------GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP  134 (337)
T ss_dssp             EETTTCCEEEEEECCBTTEEEECTTCEEECTT------SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC
T ss_pred             EECCCCCeEeeEEcCCcccccccccceEECCC------CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC
Confidence            66666777666653 1    225667888888      88888875            5799999999876652      


Q ss_pred             -ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC---------
Q psy15191         89 -LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG---------  158 (312)
Q Consensus        89 -~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---------  158 (312)
                       .+....+++++.+++++  ++.|.+||+.+.+.  .......   ....   .+.|+|+++.++..+..+         
T Consensus       135 ~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~--~~~~~~~---~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~  204 (337)
T 1pby_B          135 RQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL--VEDKPIQ---SWEA---ETYAQPDVLAVWNQHESSGVMATPFYT  204 (337)
T ss_dssp             SSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE--EEEECST---TTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEE
T ss_pred             CCcceeEECCCCCEEEEe--CCeEEEEECCCCcE--eeeeecc---ccCC---CceeCCCccEEeeeccCCCceeeeeec
Confidence             22334457788777777  68999999987542  2222211   1112   237889988766554332         


Q ss_pred             ---------------eEEE-ecccCcee-eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC
Q psy15191        159 ---------------SLHL-DVTTWKQI-QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT  221 (312)
Q Consensus       159 ---------------~i~~-d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  221 (312)
                                     .+.+ |..+.+.. ..+..+...+.+++|+|++++++++  ++.|++||+.+.+....+..    
T Consensus       205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~----  278 (337)
T 1pby_B          205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL----  278 (337)
T ss_dssp             EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC----
T ss_pred             cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC----
Confidence                           2344 77776654 1223456678899999999999888  79999999998777666553    


Q ss_pred             CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                          ...+.+++|+|++++|++++.++.|++||+.++.
T Consensus       279 ----~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          279 ----PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             ----SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred             ----CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence                2346789999999999999999999999998763

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.83  E-value=8.3e-18  Score=136.90  Aligned_cols=215  Identities=12%  Similarity=0.013  Sum_probs=152.3

Q ss_pred             EEeccCCCceEEEEEeCCCCceEEEEcccc-CcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCcccc------
Q psy15191         18 YTLTNHKSKVMAVKWNGEGGKVLYTLTNHK-SKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNYL------   89 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~~------   89 (312)
                      +......+.|  ..|+..+++.+..+..+. ..+..++|+|+      ++++ +++..++.|.+||+.+++...      
T Consensus        14 ~v~~~~~~~v--~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~   85 (349)
T 1jmx_B           14 MIVTNYPNNL--HVVDVASDTVYKSCVMPDKFGPGTAMMAPD------NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS   85 (349)
T ss_dssp             EEEEETTTEE--EEEETTTTEEEEEEECSSCCSSCEEEECTT------SSEEEEEETTTTEEEEEETTTTEEEEEEESCC
T ss_pred             EEEeCCCCeE--EEEECCCCcEEEEEecCCCCCCceeEECCC------CCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc
Confidence            3333344444  348999999988887553 25788999998      7754 566678999999998776521      


Q ss_pred             --------cccccCCCCCceEEEEeCC------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191         90 --------PYHMRDDSKQLHLLSCSMD------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        90 --------~~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                              +....+++++.++++++.+            +.|.+||+.+.+....  ....   .+...+.+++|+|+++
T Consensus        86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~---~~~~~~~~~~~s~dg~  160 (349)
T 1jmx_B           86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP--VRTF---PMPRQVYLMRAADDGS  160 (349)
T ss_dssp             STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC--SEEE---ECCSSCCCEEECTTSC
T ss_pred             ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccce--eeec---cCCCcccceeECCCCc
Confidence                    2334567888888888865            8999999986332111  1111   1223578899999999


Q ss_pred             eEEEeecCCeEEE-ecccCceeeeecccC---------------------------------------------------
Q psy15191        150 YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ---------------------------------------------------  177 (312)
Q Consensus       150 ~l~~~~~~~~i~~-d~~~~~~~~~~~~~~---------------------------------------------------  177 (312)
                       +++++.+  +.+ |..+.+....+..+.                                                   
T Consensus       161 -l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  237 (349)
T 1jmx_B          161 -LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS  237 (349)
T ss_dssp             -EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred             -EEEccCc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence             5555433  666 777776655443211                                                   


Q ss_pred             -----------------CceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191        178 -----------------LTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR  239 (312)
Q Consensus       178 -----------------~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  239 (312)
                                       ..+..++|+| ++++++++  ++.|.+||+.+.+....+..        ...+.+++|+|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~s~dg~  307 (349)
T 1jmx_B          238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL--------DHTYYCVAFDKKGD  307 (349)
T ss_dssp             EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC--------SSCCCEEEECSSSS
T ss_pred             EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC--------CCCccceEECCCCC
Confidence                             1345678889 99999888  88999999998777666652        23366899999999


Q ss_pred             eEEEeccCCeEEEEecCCC
Q psy15191        240 YFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       240 ~l~s~~~dg~i~iwd~~~~  258 (312)
                      +|++++.++.|++||+.+.
T Consensus       308 ~l~~~~~~~~v~v~d~~~~  326 (349)
T 1jmx_B          308 KLYLGGTFNDLAVFNPDTL  326 (349)
T ss_dssp             CEEEESBSSEEEEEETTTT
T ss_pred             EEEEecCCCeEEEEecccc
Confidence            9998888999999999776

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.82  E-value=1.2e-19  Score=161.90  Aligned_cols=221  Identities=11%  Similarity=0.041  Sum_probs=146.7

Q ss_pred             EEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------cccccCCCCCceEEEEeC---------CCcE
Q psy15191         52 AVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------PYHMRDDSKQLHLLSCSM---------DKSI  111 (312)
Q Consensus        52 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~---------d~~i  111 (312)
                      .++|+|+      +++++++ .|+.|++||+.+++...           +....++|++.+|+.++.         ++.|
T Consensus        20 ~~~~s~d------g~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i   92 (719)
T 1z68_A           20 FPNWISG------QEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY   92 (719)
T ss_dssp             CCEESSS------SEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             ccEECCC------CeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE
Confidence            6678887      8655554 69999999999887521           445667899999998876         7899


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee-cccCCce---------
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL-PCHQLTI---------  180 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~-~~~~~~v---------  180 (312)
                      ++||+.+++..  ....   +   ...+..++|+|||+.|+.+. ++.|++ ++.+.+..... .++...+         
T Consensus        93 ~~~d~~~g~~~--~~~~---l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~  163 (719)
T 1z68_A           93 YIYDLSNGEFV--RGNE---L---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY  163 (719)
T ss_dssp             EEEETTTTEEC--CSSC---C---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred             EEEECCCCccc--ccee---c---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence            99999885431  0011   1   13478899999999999875 678888 66555543322 1222212         


Q ss_pred             --------eEEEECCCCCEEEEEecCC----------------------------------eEEEEEccCCCeE--EEEe
Q psy15191        181 --------TQLAFSPDDTHLVSVSRDR----------------------------------RWGLYKRQSSGRL--SLVA  216 (312)
Q Consensus       181 --------~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~--~~~~  216 (312)
                              ..++|+|||++|++++.|.                                  .|++||+.+.+..  ..+.
T Consensus       164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~  243 (719)
T 1z68_A          164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP  243 (719)
T ss_dssp             HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred             eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence                    4899999999999988652                                  7889998865432  1111


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccC----CeEEEEe----cCCCCCCcccccccccceeE-EeeccCccee---
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRD----GVCVVWG----LGEPPTEEDLVQNTLWPEVQ-KLYGHGYEIY---  284 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~---  284 (312)
                      .+ .....+...+..++|+||++++++....    ..|++||    +.++....         ... ...+|...+.   
T Consensus       244 ~~-~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~---------~~~~~~~~~~~~~~~~~  313 (719)
T 1z68_A          244 VP-AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK---------TQEHIEESRTGWAGGFF  313 (719)
T ss_dssp             CC-HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG---------GGEEEEECSSSCSSSSS
T ss_pred             CC-ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE---------EEecccccCCceEcccc
Confidence            00 0001167789999999998887774432    2588888    55542110         110 0135666666   


Q ss_pred             --EEEeccCCCeEEEE
Q psy15191        285 --SLAASHDGTLLASA  298 (312)
Q Consensus       285 --~~~~s~~~~~l~s~  298 (312)
                        .++|+|||+.|+..
T Consensus       314 ~~~~~~spdg~~l~~~  329 (719)
T 1z68_A          314 VSTPVFSYDAISYYKI  329 (719)
T ss_dssp             CCCCEECTTSSCEEEE
T ss_pred             CCccEECCCCCeEEEE
Confidence              88999999976653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.82  E-value=2.5e-18  Score=153.79  Aligned_cols=229  Identities=10%  Similarity=0.080  Sum_probs=149.9

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------ccc--ccCCCCCceEEEEeCC------
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------PYH--MRDDSKQLHLLSCSMD------  108 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------~~~--~~~~~~~~~l~~~~~d------  108 (312)
                      ....+++|+|+      +++++++  |++|++||+.+++...           +.+  ..++|++.+++.++.+      
T Consensus        17 ~~~~~~~w~~d------g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~   88 (740)
T 4a5s_A           17 LKLYSLRWISD------HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH   88 (740)
T ss_dssp             CCCCCEEECSS------SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred             ccccccEECCC------CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence            34568899999      8888886  8999999998887521           111  3448899999998876      


Q ss_pred             ---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee-cccCCce---
Q psy15191        109 ---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL-PCHQLTI---  180 (312)
Q Consensus       109 ---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~-~~~~~~v---  180 (312)
                         +.+.+||+.+++..        .+..+...+...+|||||+.|+.+ .++.|++ +..+.+..+.. .++...+   
T Consensus        89 ~~~~~~~~~d~~~~~~~--------~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g  159 (740)
T 4a5s_A           89 SYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNG  159 (740)
T ss_dssp             CEEEEEEEEETTTTEEC--------CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEES
T ss_pred             ccceEEEEEECCCCcEE--------EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecC
Confidence               56679999985422        123455678999999999999887 4678888 66555543321 1222222   


Q ss_pred             --------------eEEEECCCCCEEEEEecCC------------------------------------eEEEEEccC--
Q psy15191        181 --------------TQLAFSPDDTHLVSVSRDR------------------------------------RWGLYKRQS--  208 (312)
Q Consensus       181 --------------~~~~~~~~~~~l~~~~~d~------------------------------------~i~~wd~~~--  208 (312)
                                    ..+.|||||++|+..+.|.                                    .|++||+.+  
T Consensus       160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~  239 (740)
T 4a5s_A          160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS  239 (740)
T ss_dssp             BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred             cccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence                          3589999999999876432                                    477778776  


Q ss_pred             -CC--eEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc----CCeEEEEecCCCCCCcccccccccceeEEe--ecc
Q psy15191        209 -SG--RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--YGH  279 (312)
Q Consensus       209 -~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~  279 (312)
                       ++  ....+..+.. ...+...+..++|+|||+.++....    +..|++||+.++......      ..+..+  .+|
T Consensus       240 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~------~~~~~l~~~~~  312 (740)
T 4a5s_A          240 SVTNATSIQITAPAS-MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC------LVARQHIEMST  312 (740)
T ss_dssp             SSSCCCEEEECCCHH-HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE------CGGGCEEEECS
T ss_pred             CCCcceEEEecCCcc-CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce------eEEEEeeeccC
Confidence             52  2222221100 0015667899999999997665533    337999999887410000      001111  345


Q ss_pred             Cccee-----EEEeccCCCeEE-EEec
Q psy15191        280 GYEIY-----SLAASHDGTLLA-SACK  300 (312)
Q Consensus       280 ~~~v~-----~~~~s~~~~~l~-s~s~  300 (312)
                      ...|.     .++|+|||+.|+ ..+.
T Consensus       313 ~~~v~~~~~~~p~fspDG~~l~~~~s~  339 (740)
T 4a5s_A          313 TGWVGRFRPSEPHFTLDGNSFYKIISN  339 (740)
T ss_dssp             SSCSSSSSCCCCEECTTSSEEEEEEEC
T ss_pred             CceEccCcCCCceEcCCCCEEEEEEEc
Confidence            55554     789999999887 6653

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.81  E-value=1.7e-16  Score=125.75  Aligned_cols=229  Identities=9%  Similarity=0.092  Sum_probs=155.5

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------ccccccC-CCCCceEEEEeC-CC
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRD-DSKQLHLLSCSM-DK  109 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~-~~~~~~l~~~~~-d~  109 (312)
                      ++-..+.+++++++      ++++++...++.|.+||.......             .+..+.. .+++.++++... ++
T Consensus        27 g~~~~p~~v~~~~~------g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~  100 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQ------NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH  100 (286)
T ss_dssp             TCBSCEEEEEECTT------CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred             CccCCCceEEECCC------CCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence            45577999999988      888888888999999997643221             1111222 345545555533 78


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEEC
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFS  186 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~  186 (312)
                      .|.+||...   .......    ..+...+.+++++|+++++++...++.|.+ |.. .+....+.  .+...+..++++
T Consensus       101 ~i~~~d~~g---~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~  172 (286)
T 1q7f_A          101 QIQIYNQYG---QFVRKFG----ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVN  172 (286)
T ss_dssp             EEEEECTTS---CEEEEEC----TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEEC
T ss_pred             EEEEECCCC---cEEEEec----CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEEC
Confidence            999999432   2222221    123346789999999997777777888887 533 33443332  344568999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-eEEEEecCCCCCCcccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-VCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~  265 (312)
                      |+++++++...++.|++||.. .+.+..+....     +...+..++++|+|+++++...++ .|.+||....       
T Consensus       173 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g-----~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-------  239 (286)
T 1q7f_A          173 DKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEG-----ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-------  239 (286)
T ss_dssp             SSSEEEEEEGGGTEEEEEETT-CCEEEEESCTT-----TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-------
T ss_pred             CCCCEEEEECCCCEEEEEcCC-CCEEEEEccCC-----ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-------
Confidence            999988887889999999975 44444443211     224578999999999999888886 9999985432       


Q ss_pred             cccccceeEEeeccC--cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHG--YEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            .+..+..+.  ..+.+++++|+|+++++ +.|+     .|++|
T Consensus       240 ------~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~-----~v~v~  276 (286)
T 1q7f_A          240 ------LISALESKVKHAQCFDVALMDDGSVVLA-SKDY-----RLYIY  276 (286)
T ss_dssp             ------EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTT-----EEEEE
T ss_pred             ------EEEEEcccCCCCcceeEEECCCCcEEEE-CCCC-----eEEEE
Confidence                  344444433  34779999999987777 4444     49887

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.81  E-value=6.6e-18  Score=139.68  Aligned_cols=251  Identities=9%  Similarity=-0.000  Sum_probs=159.4

Q ss_pred             EeCCCCceEEEEccccCcEEE-----EEEecCcCcCCCCceEEEecC-CCc--EEEeeecCCccccc--------ccccC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMA-----VKWVLNTSLDPEHKDLVSCSL-DKT--AILWKYVSEGNYLP--------YHMRD   95 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~-----~~~~~~~~~~~~~~~l~s~~~-dg~--i~vw~~~~~~~~~~--------~~~~~   95 (312)
                      +++.++..+..+..|......     .+|+|+      |++|+.++. ++.  |.+||+.+++...+        ....+
T Consensus        15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpD------g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~   88 (388)
T 3pe7_A           15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRD------GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL   88 (388)
T ss_dssp             ECTTTCCEEEECSCTTSCEECCCTTSCCBCTT------SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE
T ss_pred             ecCCCCcceEEecCCcccccchhhcCccCCCC------CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE
Confidence            577788888888888766666     677777      998888877 674  78888877765221        13456


Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee--EEEECCCCCeEEEee------------------
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY--GCKFGPRGDYIIAHG------------------  155 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~------------------  155 (312)
                      ++++..|+.++.++.|++||+.+++...+...       +...+.  ...++|+++.++...                  
T Consensus        89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~  161 (388)
T 3pe7_A           89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQV-------PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF  161 (388)
T ss_dssp             CTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCcceeeeec-------hhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence            88999999999999999999998654433221       122222  234589999887432                  


Q ss_pred             ----cCCeEEE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        156 ----FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       156 ----~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                          .+..|.+ |+.+.+..... .+...+..++|+| ||+.|+.+..+      ..|.++|.............     
T Consensus       162 ~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-----  235 (388)
T 3pe7_A          162 YFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA-----  235 (388)
T ss_dssp             GGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC-----
T ss_pred             hccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC-----
Confidence                2345666 87777654433 4667789999999 99998887753      36888887655433322210     


Q ss_pred             ccceeeEEEEEcCCCceEEEecc-CC----eEEEEecCCCCCCcccccccccceeEEeeccCc---ceeEEEeccCCCeE
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISR-DG----VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY---EIYSLAASHDGTLL  295 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l  295 (312)
                       ....+..++|+|||+.|+..+. ++    .|++||+.++...          .+..+.++..   ....++|+|||+.|
T Consensus       236 -~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~----------~l~~~~~~~~~~~~~~~~~~spdg~~l  304 (388)
T 3pe7_A          236 -EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR----------QLTSMPACSHLMSNYDGSLMVGDGSDA  304 (388)
T ss_dssp             -TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE----------EEEEECCEEEEEECTTSSEEEEEECCC
T ss_pred             -CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE----------EEEcCCCceeeeecCCCCeEccCCCcc
Confidence             1245778899999998866543 22    3999999877321          2222222111   12234799999988


Q ss_pred             EEEecCCC----cccceEEeC
Q psy15191        296 ASACKATK----PEHAAIIIW  312 (312)
Q Consensus       296 ~s~s~d~~----~~dg~i~iW  312 (312)
                      +....++.    ..+..|++|
T Consensus       305 ~~~~~~~~~~~~~~~~~i~~~  325 (388)
T 3pe7_A          305 PVDVQDDSGYKIENDPFLYVF  325 (388)
T ss_dssp             ------------CCCCEEEEE
T ss_pred             eeEeeeccccccCCCCEEEEE
Confidence            87643310    224457665

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.80  E-value=8.5e-18  Score=139.30  Aligned_cols=233  Identities=10%  Similarity=-0.065  Sum_probs=145.8

Q ss_pred             EEeCCCCceEEEEccccCcE-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc-----------------
Q psy15191         31 KWNGEGGKVLYTLTNHKSKV-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH-----------------   92 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-----------------   92 (312)
                      .|+..+++.... ..+...+ ..+.|+|+      |++|+.++.++.|.+||+.+++...+..                 
T Consensus        64 ~~d~~~~~~~~l-~~~~~~~~~~~~~spd------g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~  136 (396)
T 3c5m_A           64 LLNLETQQAVQL-TEGKGDNTFGGFISTD------ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDC  136 (396)
T ss_dssp             EEETTTTEEEEC-CCSSCBCTTTCEECTT------SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS
T ss_pred             EEECCCCcEEEe-ecCCCCccccceECCC------CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccC
Confidence            356655554333 3232332 23677777      9999999999999999998876532221                 


Q ss_pred             ----------ccCCCCCceEEEE-----eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeec
Q psy15191         93 ----------MRDDSKQLHLLSC-----SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGF  156 (312)
Q Consensus        93 ----------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  156 (312)
                                ..+++++..++..     ..+..|.+||+.+++...+.        .+...+..+.|+| +++.|+..+.
T Consensus       137 ~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--------~~~~~~~~~~~sp~dg~~l~~~~~  208 (396)
T 3c5m_A          137 TKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--------QDTAWLGHPIYRPFDDSTVGFCHE  208 (396)
T ss_dssp             SEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--------EESSCEEEEEEETTEEEEEEEEEC
T ss_pred             CccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--------cCCcccccceECCCCCCEEEEEec
Confidence                      1123333333222     34567899998875432221        2334578899999 7887776654


Q ss_pred             C------CeEEE-ecccCceeeeeccc-CCceeEEEECCCCCEEEEEecC-----CeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        157 Q------GSLHL-DVTTWKQIQTLPCH-QLTITQLAFSPDDTHLVSVSRD-----RRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       157 ~------~~i~~-d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      +      ..|.+ |....+........ ...+..++|+|||++|+.++.+     +.|++||+.+++.......      
T Consensus       209 ~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~------  282 (396)
T 3c5m_A          209 GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM------  282 (396)
T ss_dssp             SCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC------
T ss_pred             CCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC------
Confidence            3      24555 65544433222211 2357889999999988777554     4599999987765443321      


Q ss_pred             ccceeeEEEEEcC-CCceEEEec----------------cCCeEEEEecCCCCCCcccccccccceeEEeeccCc-----
Q psy15191        224 VHKRIIWGVAWSH-DSRYFLTIS----------------RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY-----  281 (312)
Q Consensus       224 ~~~~~v~~~~~~~-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  281 (312)
                       . . .. +.|+| +|+++++++                .++.|++||+..+.             ...+..+..     
T Consensus       283 -~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~-------------~~~l~~~~~~~~~~  345 (396)
T 3c5m_A          283 -P-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS-------------AQKLCKHSTSWDVL  345 (396)
T ss_dssp             -C-S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB-------------CCEEEECCCCCCCB
T ss_pred             -C-C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc-------------eEEccCCCCccccc
Confidence             1 1 22 88999 999888754                34689999987762             223333433     


Q ss_pred             ------ceeEEEeccCCCeEEEEecC
Q psy15191        282 ------EIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       282 ------~v~~~~~s~~~~~l~s~s~d  301 (312)
                            .+..++|+|+|+.|+.++.+
T Consensus       346 ~~~~~~~~~~~~~s~dg~~l~~~s~~  371 (396)
T 3c5m_A          346 DGDRQITHPHPSFTPNDDGVLFTSDF  371 (396)
T ss_dssp             TTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred             cccccCCCCCceEccCCCeEEEEecC
Confidence                  25678999999999888643

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.80  E-value=7.7e-17  Score=130.28  Aligned_cols=236  Identities=12%  Similarity=0.101  Sum_probs=163.2

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCC------------------------CcEEEeeecCCccc---------ccccc
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLD------------------------KTAILWKYVSEGNY---------LPYHM   93 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d------------------------g~i~vw~~~~~~~~---------~~~~~   93 (312)
                      -+.+.+++++|+      |+++++...+                        ++|.+||..+++..         .+..+
T Consensus        23 l~~v~~va~d~~------G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gi   96 (329)
T 3fvz_A           23 PGQVSGVALDSK------NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGL   96 (329)
T ss_dssp             CSCEEEEEECTT------CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEE
T ss_pred             cCCceEEEECCC------CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEE
Confidence            367899999988      8888888777                        47999998876642         22234


Q ss_pred             cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec----ccCCCccceeEEEECC-CCCeEEEee-cCCeEEE-eccc
Q psy15191         94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG----EVGGNTLGFYGCKFGP-RGDYIIAHG-FQGSLHL-DVTT  166 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~~i~~-d~~~  166 (312)
                      ..++++.++++...++.|++|+...... .+......    ....+...+..++++| ++.++++.+ .++.|++ + .+
T Consensus        97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~  174 (329)
T 3fvz_A           97 SIDTDGNYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS  174 (329)
T ss_dssp             EECTTSCEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred             EECCCCCEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence            4567788888888889999999865311 11111100    0023344688999999 788777775 5888888 5 34


Q ss_pred             Cceeeeecc----------cCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc
Q psy15191        167 WKQIQTLPC----------HQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS  235 (312)
Q Consensus       167 ~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  235 (312)
                      ......+..          +-.....++++|+ +.++++...++.|++||..+++.+..+....     +...+.+++++
T Consensus       175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~  249 (329)
T 3fvz_A          175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-----FGRNVFAISYI  249 (329)
T ss_dssp             SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-----TTTCEEEEEEE
T ss_pred             CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-----cCCCcceeeec
Confidence            555544431          2234789999998 7777777788999999998777776664321     44567789999


Q ss_pred             C------CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe---eccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191        236 H------DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL---YGHGYEIYSLAASHDGTLLASACKATKPEH  306 (312)
Q Consensus       236 ~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~s~d~~~~d  306 (312)
                      |      +++.+++...+..|++|++.++.            .+..+   .++...+.+++++|+|.++++...++.   
T Consensus       250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~------------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~---  314 (329)
T 3fvz_A          250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGE------------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNT---  314 (329)
T ss_dssp             TTEEEEEECCCCTTCSCCCCEEEEETTTCC------------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCC---
T ss_pred             CCEEEEeCCCEEeccCCCcEEEEEEcCCCe------------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCE---
Confidence            9      33333333445589999988763            34444   356677899999999988888854444   


Q ss_pred             ceEEeC
Q psy15191        307 AAIIIW  312 (312)
Q Consensus       307 g~i~iW  312 (312)
                        |++|
T Consensus       315 --I~~~  318 (329)
T 3fvz_A          315 --VWKF  318 (329)
T ss_dssp             --EEEE
T ss_pred             --EEEE
Confidence              8876

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.77  E-value=1.7e-15  Score=120.60  Aligned_cols=230  Identities=10%  Similarity=-0.032  Sum_probs=156.7

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d  108 (312)
                      +..+..+..+.....+++|+|+      ++ +++++..++.|..|+..++ ..       .+..+..++++.++++...+
T Consensus        17 ~~~~~~l~~~~~~~eg~~~d~~------g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~   89 (296)
T 3e5z_A           17 GAEARRLADGFTWTEGPVYVPA------RSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGL   89 (296)
T ss_dssp             TCCCEEEECCCSSEEEEEEEGG------GTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTT
T ss_pred             CCcEEEEecCCccccCCeEeCC------CCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCC
Confidence            3444556666777899999999      77 7888888999999998876 21       12334446777777776677


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE----eec-------------CCeEEE-ecccCcee
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA----HGF-------------QGSLHL-DVTTWKQI  170 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------~~~i~~-d~~~~~~~  170 (312)
                      +.|.+||..+++........   .......+..++++|+|+++++    +..             .+.|.. +.. .+..
T Consensus        90 ~~i~~~d~~~g~~~~~~~~~---~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~  165 (296)
T 3e5z_A           90 RRLERQREPGGEWESIADSF---EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS  165 (296)
T ss_dssp             TEEEEECSTTCCEEEEECEE---TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE
T ss_pred             CeEEEEcCCCCcEEEEeecc---CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE
Confidence            89999998765432221111   0111234678999999998886    321             234444 444 3332


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE----EEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL----SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                       .+..+......++|+|+++.+++.+.++.|++||+.....+    ..+ ..      +...+.+++++++|+++++.  
T Consensus       166 -~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~------~~~~p~~i~~d~~G~l~v~~--  235 (296)
T 3e5z_A          166 -APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV------EPGKTDGLRVDAGGLIWASA--  235 (296)
T ss_dssp             -EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC------SSSCCCSEEEBTTSCEEEEE--
T ss_pred             -EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC------CCCCCCeEEECCCCCEEEEc--
Confidence             23345566789999999998877778899999999732222    222 11      33446679999999977776  


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe-ccCCCeEEEEecC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA-SHDGTLLASACKA  301 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~s~d  301 (312)
                      ++.|.+||....             .+..+..+.. +.+++| +|+++.|..++.+
T Consensus       236 ~~~v~~~~~~g~-------------~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~  277 (296)
T 3e5z_A          236 GDGVHVLTPDGD-------------ELGRVLTPQT-TSNLCFGGPEGRTLYMTVST  277 (296)
T ss_dssp             TTEEEEECTTSC-------------EEEEEECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred             CCeEEEECCCCC-------------EEEEEECCCC-ceeEEEECCCCCEEEEEcCC
Confidence            788999997532             5566666666 899999 6899888888543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.76  E-value=5.3e-15  Score=119.69  Aligned_cols=240  Identities=7%  Similarity=-0.012  Sum_probs=156.1

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d  108 (312)
                      ++....+..+...+.+++|+++      +++++++..++.|.+||..+++...        +..+..++++.++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~------g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~  107 (333)
T 2dg1_A           34 AEPWLEISKKGLQLEGLNFDRQ------GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGD  107 (333)
T ss_dssp             CEEEEEEESSCCCEEEEEECTT------SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTT
T ss_pred             cceeEEEeccCccccCcEECCC------CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCC
Confidence            4556677777778899999988      8888888889999999988765422        2233446677767766665


Q ss_pred             ----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec------CCeEEE-ecccCceeeeecccC
Q psy15191        109 ----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF------QGSLHL-DVTTWKQIQTLPCHQ  177 (312)
Q Consensus       109 ----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-d~~~~~~~~~~~~~~  177 (312)
                          +.|.+||..+........    . ......+.+++++|+++++++...      .+.+.. +..+.+..... ...
T Consensus       108 ~~~~~~i~~~d~~~~~~~~~~~----~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~  181 (333)
T 2dg1_A          108 FKSTGGIFAATENGDNLQDIIE----D-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNI  181 (333)
T ss_dssp             SSSCCEEEEECTTSCSCEEEEC----S-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEE
T ss_pred             CCCCceEEEEeCCCCEEEEEEc----c-CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCC
Confidence                689999988754321111    0 123456889999999987776553      244444 55443333222 233


Q ss_pred             CceeEEEECCCCCEEEE-EecCCeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        178 LTITQLAFSPDDTHLVS-VSRDRRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      ..+..++|+|+++.|+. .+.++.|.+||+.+ ......+.............+..++++++|+++++...++.|.+||.
T Consensus       182 ~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~  261 (333)
T 2dg1_A          182 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  261 (333)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence            45788999999986654 45678999999964 23222211000000001135778999999998888878899999987


Q ss_pred             CCCCCCcccccccccceeEEeeccCc------ceeEEEeccCCCeEEEEecC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGY------EIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~s~d  301 (312)
                      ...             .+..+..+..      .+.+++|+|+++.|..++.+
T Consensus       262 ~g~-------------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          262 RGY-------------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             TSC-------------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             CCC-------------EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            422             3444443332      68999999998766655443

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.75  E-value=1.8e-15  Score=123.66  Aligned_cols=251  Identities=9%  Similarity=0.045  Sum_probs=156.1

Q ss_pred             CCeEEEEeccCCCce---EEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEE
Q psy15191         13 GGKVLYTLTNHKSKV---MAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAIL   79 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v---~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~v   79 (312)
                      .++.++........+   ....||..+++.+.++..+..+  .++|+|+      +++++++.          .++.|.+
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spd------g~~lyv~~~~~~~~~~g~~~~~v~v   85 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSND------GKKIYTMTTYHERITRGKRSDVVEV   85 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTT------SSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCC------CCEEEEEEecccccccCCCCCEEEE
Confidence            456666655332222   2344799999999999877655  8999998      99888875          3678999


Q ss_pred             eeecCCcccc--------------cccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeee-eeeccc----CCCccc
Q psy15191         80 WKYVSEGNYL--------------PYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLET-ARVGEV----GGNTLG  138 (312)
Q Consensus        80 w~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~-~~~~~~----~~~~~~  138 (312)
                      ||..+.+...              ...+..++++.+|+++..  ++.|.+||+.+.+.  +.. ......    ......
T Consensus        86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~~~~~~v~~~p~~~  163 (361)
T 2oiz_A           86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAAAGCWSVIPQPNRP  163 (361)
T ss_dssp             EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGGTTEEEEEECTTSS
T ss_pred             EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecCCCcceeEEcCCCC
Confidence            9998766521              223455788888888764  58899999998532  222 211000    000000


Q ss_pred             eeEEEECCCCCeE--------------------------------------EEeecCCeEEE-ecccCce--eeeec---
Q psy15191        139 FYGCKFGPRGDYI--------------------------------------IAHGFQGSLHL-DVTTWKQ--IQTLP---  174 (312)
Q Consensus       139 v~~~~~~~~~~~l--------------------------------------~~~~~~~~i~~-d~~~~~~--~~~~~---  174 (312)
                      ..-++++++|+.+                                      +..+.++.+.+ |......  ...+.   
T Consensus       164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~  243 (361)
T 2oiz_A          164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN  243 (361)
T ss_dssp             SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred             eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence            0112222333322                                      22222333333 3221110  00000   


Q ss_pred             ---cc----CCceeEEEECCCCCEEEEEec-----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC
Q psy15191        175 ---CH----QLTITQLAFSPDDTHLVSVSR-----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH  236 (312)
Q Consensus       175 ---~~----~~~v~~~~~~~~~~~l~~~~~-----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  236 (312)
                         .+    ......++++|+++.++++..           .+.|.+||+.+.+.+..+..       +.  +.+++|+|
T Consensus       244 ~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-------~~--p~~ia~sp  314 (361)
T 2oiz_A          244 DEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-------RD--ALSMTIDQ  314 (361)
T ss_dssp             HHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-------TT--CCEEEEET
T ss_pred             ccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-------CC--eeEEEECC
Confidence               00    011123789999888877643           34899999999888887775       33  78999999


Q ss_pred             CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        237 DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       237 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      +|++|++++. +.|.+||..++..          +.+..+..+......++++|+|.
T Consensus       315 dg~~l~v~n~-~~v~v~D~~t~~l----------~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          315 QRNLMLTLDG-GNVNVYDISQPEP----------KLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             TTTEEEEECS-SCEEEEECSSSSC----------EEEEEETTSCSSEEEEEECCCSC
T ss_pred             CCCEEEEeCC-CeEEEEECCCCcc----------eeeEEeccCCCCcEEEEecCCCC
Confidence            9999998887 9999999887621          15666666777788999999986

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.75  E-value=3.3e-16  Score=138.51  Aligned_cols=236  Identities=14%  Similarity=0.059  Sum_probs=152.4

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEe--cCCCcEEEeeecCCcc-c-------ccc----------c-ccCCCCCc
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSC--SLDKTAILWKYVSEGN-Y-------LPY----------H-MRDDSKQL  100 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~--~~dg~i~vw~~~~~~~-~-------~~~----------~-~~~~~~~~  100 (312)
                      .+.+|...+..++|+++      ..++++.  +.++...||....+.. .       .+.          + ...+|++.
T Consensus        18 ~~~~~~~~~~~~~~s~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~   91 (662)
T 3azo_A           18 LVASRSGRPACVGAVGD------EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGG   91 (662)
T ss_dssp             HHHHTCSCCEEEEEETT------EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred             HHhhcCCccceeEEcCC------eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCC
Confidence            45678889999999887      6666776  6688899998643322 1       111          1 11137777


Q ss_pred             e-EEEEeC-CCcEEEEcCC--C-CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----------CeEEE-ec
Q psy15191        101 H-LLSCSM-DKSIIVWAPD--P-TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----------GSLHL-DV  164 (312)
Q Consensus       101 ~-l~~~~~-d~~i~i~d~~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~i~~-d~  164 (312)
                      . |+..+. +..|.++++.  . ++...+...   ....+...+..++|+|||+.|+.++.+          ..|++ |+
T Consensus        92 ~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~---~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~  168 (662)
T 3azo_A           92 PLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV---SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL  168 (662)
T ss_dssp             CEEEEEBTTTCCEEEECTTSTTCCCCEECSCC---CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred             eEEEEEECCCCeEEEEcCCCCCCCCCEeccCC---ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence            7 665543 5667777765  2 221111100   000145678899999999999988876          45666 77


Q ss_pred             cc------Cceeeeec-ccCCceeEEEECCCCCEEEEEecCC--------eEEEEEcc-CCC--eEEEEeccCCCCcccc
Q psy15191        165 TT------WKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDR--------RWGLYKRQ-SSG--RLSLVACSDKTNGVHK  226 (312)
Q Consensus       165 ~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~~wd~~-~~~--~~~~~~~~~~~~~~~~  226 (312)
                      .+      .+.. .+. .+...+..++|+|||++|+.++.++        .|++||+. ++.  ....+...      +.
T Consensus       169 ~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~------~~  241 (662)
T 3azo_A          169 DGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG------PE  241 (662)
T ss_dssp             TSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE------TT
T ss_pred             CCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC------CC
Confidence            66      4433 333 4556788899999999999887553        79999998 441  33333321      35


Q ss_pred             eeeEEEEEcCCCceEEEeccCC--eEEEEecCCCCCCcccccccccceeEEee-ccCcc--------eeEEEeccCCCeE
Q psy15191        227 RIIWGVAWSHDSRYFLTISRDG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYE--------IYSLAASHDGTLL  295 (312)
Q Consensus       227 ~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------v~~~~~s~~~~~l  295 (312)
                      ..+..++|+|||++++++..++  .|++||+..+.             ...+. .+...        +..++|+|+++++
T Consensus       242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~-------------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~  308 (662)
T 3azo_A          242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA-------------ATQLCRREEEFAGPLWTPGMRWFAPLANGLIA  308 (662)
T ss_dssp             BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC-------------EEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred             ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc-------------eeecccccccccCccccccCceEeEeCCCEEE
Confidence            6788999999999888888888  56666654442             12222 22211        5678999999999


Q ss_pred             EEEecCCCcccceEEeC
Q psy15191        296 ASACKATKPEHAAIIIW  312 (312)
Q Consensus       296 ~s~s~d~~~~dg~i~iW  312 (312)
                      ++++. +     .++||
T Consensus       309 ~~~~~-~-----~~~l~  319 (662)
T 3azo_A          309 VVHGK-G-----AAVLG  319 (662)
T ss_dssp             EEEBS-S-----SCEEE
T ss_pred             EEEEc-C-----ccEEE
Confidence            99854 3     36665

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.73  E-value=2.5e-16  Score=130.45  Aligned_cols=234  Identities=10%  Similarity=-0.040  Sum_probs=152.2

Q ss_pred             EeCCCCceEEEEccccCc-----EEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCcccc-------ccc-ccC
Q psy15191         32 WNGEGGKVLYTLTNHKSK-----VMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNYL-------PYH-MRD   95 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~~-------~~~-~~~   95 (312)
                      .++.+++.+..+..+...     +..++|+|+      |++|+....+   ..|.+||+.+++...       ... ..+
T Consensus        15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~Spd------G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~   88 (396)
T 3c5m_A           15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQD------GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI   88 (396)
T ss_dssp             ECTTTCCEEEECSCTTSCEECCCTTSCCBCTT------SCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE
T ss_pred             ecCCCCcceEEEecCCCCccceeeecCcCCCC------CCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE
Confidence            577888888888766444     566677777      9887766432   468888887765421       112 335


Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE-------------------EEECCCCCeEEEe--
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG-------------------CKFGPRGDYIIAH--  154 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~--  154 (312)
                      ++++..|+..+.++.|++||+.+++...+....       ......                   +.++|+++.++..  
T Consensus        89 spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~  161 (396)
T 3c5m_A           89 STDERAFFYVKNELNLMKVDLETLEEQVIYTVD-------EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF  161 (396)
T ss_dssp             CTTSSEEEEEETTTEEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred             CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc-------cccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence            888999999999999999999875543322211       111111                   3567888876654  


Q ss_pred             ---ecCCeEEE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        155 ---GFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       155 ---~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                         ..+..|.+ |+.+.+..... .+...+..+.|+| +++.|+..+.+      ..|.+||+.......... . .   
T Consensus       162 ~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~-~---  235 (396)
T 3c5m_A          162 YHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-H-A---  235 (396)
T ss_dssp             HHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-C-C---
T ss_pred             ccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-c-C---
Confidence               34456666 77776655444 4667789999999 78877776543      358888887544322211 0 0   


Q ss_pred             ccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEE
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLAS  297 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s  297 (312)
                       ....+..++|+|+|++|+.++.+     +.|++||+.++.             ...+..... .. ++|+| +|++|++
T Consensus       236 -~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-------------~~~l~~~~~-~~-~~~s~~dg~~l~~  299 (396)
T 3c5m_A          236 -EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE-------------NEEVMVMPP-CS-HLMSNFDGSLMVG  299 (396)
T ss_dssp             -TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC-------------EEEEEECCS-EE-EEEECSSSSEEEE
T ss_pred             -CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC-------------eEEeeeCCC-CC-CCccCCCCceEEE
Confidence             13457889999999988877554     459999987763             111211111 22 89999 9998888


Q ss_pred             Eec
Q psy15191        298 ACK  300 (312)
Q Consensus       298 ~s~  300 (312)
                      ++.
T Consensus       300 ~~~  302 (396)
T 3c5m_A          300 DGC  302 (396)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            653

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.73  E-value=1.4e-15  Score=134.51  Aligned_cols=241  Identities=12%  Similarity=-0.010  Sum_probs=149.9

Q ss_pred             EeCCCCceEEEEccccCcEE---------EEEEe--cCcCcCCCCce-EEEec-CCCcEEEeeec--C-Ccccc------
Q psy15191         32 WNGEGGKVLYTLTNHKSKVM---------AVKWV--LNTSLDPEHKD-LVSCS-LDKTAILWKYV--S-EGNYL------   89 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~~~~~~~-l~s~~-~dg~i~vw~~~--~-~~~~~------   89 (312)
                      |....+.....+..|...+.         ...|+  |+      |+. |+.++ .+..|.++++.  . +....      
T Consensus        52 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD------g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~  125 (662)
T 3azo_A           52 VRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPA------GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA  125 (662)
T ss_dssp             EEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSS------SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC
T ss_pred             EEECCCCCcceeCCCCccccccccccCCccceeeeecC------CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc
Confidence            44333445666777766666         66666  66      887 66554 35667777765  2 33211      


Q ss_pred             ------cccccCCCCCceEEEEeCC----------CcEEEEcCCC------CcceeeeeeeecccC-CCccceeEEEECC
Q psy15191         90 ------PYHMRDDSKQLHLLSCSMD----------KSIIVWAPDP------TTGLWLETARVGEVG-GNTLGFYGCKFGP  146 (312)
Q Consensus        90 ------~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~------~~~~~~~~~~~~~~~-~~~~~v~~~~~~~  146 (312)
                            .....+++++..|++++.+          ..|++||+.+      ++...        +. .+...+..++|+|
T Consensus       126 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~Sp  197 (662)
T 3azo_A          126 VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE--------LSDDAHRFVTGPRLSP  197 (662)
T ss_dssp             STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE--------SSCSCSSEECCCEECT
T ss_pred             CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE--------EEecCCCcccCceECC
Confidence                  2233457888899988876          5899999986      33211        11 2335677889999


Q ss_pred             CCCeEEEeecCC--------eEEE-ecc-cC---ceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEccCCCe
Q psy15191        147 RGDYIIAHGFQG--------SLHL-DVT-TW---KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQSSGR  211 (312)
Q Consensus       147 ~~~~l~~~~~~~--------~i~~-d~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~  211 (312)
                      ||++|+.++.++        .|.+ |+. +.   +.......+...+..+.|+|||++++++..++  .|.+||+.+.+.
T Consensus       198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~  277 (662)
T 3azo_A          198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA  277 (662)
T ss_dssp             TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred             CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence            999999877553        6777 776 45   33333334578899999999999888888888  566666655544


Q ss_pred             EEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE-Eec
Q psy15191        212 LSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL-AAS  289 (312)
Q Consensus       212 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s  289 (312)
                      ............. -...+..++|+|+++++++++. +.++||.+.....           .+..+..|...+..+ +++
T Consensus       278 ~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~-----------~~~~l~~~~~~~~~~~s~~  345 (662)
T 3azo_A          278 TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG-----------ELVDAAGPWTEWAATLTVS  345 (662)
T ss_dssp             EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT-----------EEEECCSSCCEEEEEEEEE
T ss_pred             eecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC-----------cEEEecCCCCeEEEEEecC
Confidence            3322211110000 0011456899999999999998 9999995432211           456667777777776 444


Q ss_pred             cCCCeEEEE
Q psy15191        290 HDGTLLASA  298 (312)
Q Consensus       290 ~~~~~l~s~  298 (312)
                      ++.-+++++
T Consensus       346 ~~~~~~~~~  354 (662)
T 3azo_A          346 GTRAVGVAA  354 (662)
T ss_dssp             TTEEEEEEE
T ss_pred             CCEEEEEEc
Confidence            333333334

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.73  E-value=9.9e-15  Score=130.01  Aligned_cols=239  Identities=8%  Similarity=-0.058  Sum_probs=159.5

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCC-----cEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCc---
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDK-----TAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKS---  110 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg-----~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~---  110 (312)
                      |...+..++|+|+      |++||.++.++     .|++||+.+++...       .....+++++..|+.++.++.   
T Consensus       123 ~~~~~~~~~~SPD------g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~  196 (710)
T 2xdw_A          123 GTVALRGYAFSED------GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGK  196 (710)
T ss_dssp             SCEEEEEEEECTT------SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred             CCEEEEEEEECCC------CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccc
Confidence            4346889999999      99988765543     89999999887632       233567889989998887766   


Q ss_pred             -------------EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-----CCeEEE-eccc-----
Q psy15191        111 -------------IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-----QGSLHL-DVTT-----  166 (312)
Q Consensus       111 -------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~i~~-d~~~-----  166 (312)
                                   |++|++.++.......   .....+...+..+.|+|+|++|+..+.     +..+.+ |+.+     
T Consensus       197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~  273 (710)
T 2xdw_A          197 SDGTETSTNLHQKLYYHVLGTDQSEDILC---AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI  273 (710)
T ss_dssp             CSSSCCCCCCCCEEEEEETTSCGGGCEEE---ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred             ccccccccCCCCEEEEEECCCCcccceEE---eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc
Confidence                         9999998754321111   111234455778999999999888765     457777 7765     


Q ss_pred             -Cc-eeeeecccCCceeEEEECCCCCEEEEEecC----CeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        167 -WK-QIQTLPCHQLTITQLAFSPDDTHLVSVSRD----RRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       167 -~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                       .. ....+..+...+.. .|+|+|+.|+..+..    +.|.+||+.+...  ...+....     ....+..++|++++
T Consensus       274 ~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~  347 (710)
T 2xdw_A          274 TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-----EKDVLEWVACVRSN  347 (710)
T ss_dssp             CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-----SSCEEEEEEEETTT
T ss_pred             CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-----CCCeEEEEEEEcCC
Confidence             32 23344445555544 488899888776653    3699999987642  23333211     11357789999888


Q ss_pred             ceEEEeccCCe--EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        239 RYFLTISRDGV--CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       239 ~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .++++...|+.  |++|++..+.            .+..+..+.+.+..++++|+++.|+...... ...+.|++|
T Consensus       348 ~lv~~~~~~g~~~l~~~~~~~g~------------~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~i~~~  410 (710)
T 2xdw_A          348 FLVLCYLHDVKNTLQLHDLATGA------------LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSF-LSPGIIYHC  410 (710)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCC------------EEEEECCCSSEEEEEECCTTCSEEEEEEECS-SCCCEEEEE
T ss_pred             EEEEEEEECCEEEEEEEECCCCC------------EEEecCCCCceEEEEecCCCCCEEEEEEeCC-CCCCEEEEE
Confidence            88899988985  5556664442            4556666777889999999987665442222 234556554

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.72  E-value=1e-15  Score=137.01  Aligned_cols=231  Identities=10%  Similarity=0.068  Sum_probs=147.4

Q ss_pred             eCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcE-----EEEEEecCcCcCCCCceEEEecCC---------C
Q psy15191         10 NGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKV-----MAVKWVLNTSLDPEHKDLVSCSLD---------K   75 (312)
Q Consensus        10 ~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~~~~~~l~s~~~d---------g   75 (312)
                      -..+|+.++.-   .+.|  ..|+..+++....+.+|....     ..++|+|+      |++|+.++.+         +
T Consensus        24 w~~dg~~~~~~---~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd------g~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           24 WISDHEYLYKQ---ENNI--LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD------GQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             ECSSSEEEEEE---TTEE--EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT------SSEEEEEEEEEECSSSCEEE
T ss_pred             ECCCCcEEEEc---CCcE--EEEECCCCceEEEEechhhhhhcccccceEECCC------CCEEEEEECCeeeEEEccce
Confidence            34456766653   3333  459999999988888886432     34677888      9999998876         5


Q ss_pred             cEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec--ccCCCc---------c
Q psy15191         76 TAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG--EVGGNT---------L  137 (312)
Q Consensus        76 ~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~---------~  137 (312)
                      .+.+||+.+++...       .....++|++..|+.+ .++.|++|++.+++...+......  .+.++.         .
T Consensus        93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~  171 (740)
T 4a5s_A           93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS  171 (740)
T ss_dssp             EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred             EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence            66799999887532       3445668999999887 468999999987543221110000  000111         1


Q ss_pred             ceeEEEECCCCCeEEEeecCC------------------------------------eEEE-eccc---Cc--eeeeec-
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQG------------------------------------SLHL-DVTT---WK--QIQTLP-  174 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~------------------------------------~i~~-d~~~---~~--~~~~~~-  174 (312)
                      ....+.|||||+.|+.+..|.                                    .+.+ |+.+   .+  ....+. 
T Consensus       172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~  251 (740)
T 4a5s_A          172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA  251 (740)
T ss_dssp             SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred             CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence            223589999999998875321                                    3444 6665   42  111222 


Q ss_pred             -----ccCCceeEEEECCCCCEEEEEec----CCeEEEEEccCCC-------eEEEEeccCCCCcccceeeE-----EEE
Q psy15191        175 -----CHQLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSG-------RLSLVACSDKTNGVHKRIIW-----GVA  233 (312)
Q Consensus       175 -----~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-------~~~~~~~~~~~~~~~~~~v~-----~~~  233 (312)
                           +|...+..++|+|||+.++....    +..|++||+.+++       ....+...      +...+.     .++
T Consensus       252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~------~~~~v~~~~~~~p~  325 (740)
T 4a5s_A          252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS------TTGWVGRFRPSEPH  325 (740)
T ss_dssp             CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC------SSSCSSSSSCCCCE
T ss_pred             CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc------CCceEccCcCCCce
Confidence                 37778999999999997665533    2369999998876       11111111      232332     678


Q ss_pred             EcCCCceEE-Eecc-CC--eEEEEecCCC
Q psy15191        234 WSHDSRYFL-TISR-DG--VCVVWGLGEP  258 (312)
Q Consensus       234 ~~~~~~~l~-s~~~-dg--~i~iwd~~~~  258 (312)
                      |+|||+.|+ ..+. +|  .|++||+..+
T Consensus       326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~  354 (740)
T 4a5s_A          326 FTLDGNSFYKIISNEEGYRHICYFQIDKK  354 (740)
T ss_dssp             ECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred             EcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence            999999877 6653 44  6888888765

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.72  E-value=1.6e-14  Score=113.19  Aligned_cols=226  Identities=12%  Similarity=0.024  Sum_probs=148.9

Q ss_pred             cEEEEEEecCcCcCCCCceEE-EecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLV-SCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPT  119 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  119 (312)
                      ...++++.++      +++++ +...++.|.+|+..+....        .+..+...+++.++++.. ++.|.+||....
T Consensus        25 ~p~~i~~~~~------g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~   97 (270)
T 1rwi_B           25 SPSGVAVDSA------GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN   97 (270)
T ss_dssp             CEEEEEECTT------CCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred             CccceEECCC------CCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence            6788999888      88777 5577889999987654321        222233455666555555 889999998763


Q ss_pred             cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191        120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD  198 (312)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  198 (312)
                      ...   ...    ......+..++++++++.+++...++.|.. +..+.............+..++++|+|+.+++...+
T Consensus        98 ~~~---~~~----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~  170 (270)
T 1rwi_B           98 NQT---VLP----FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDN  170 (270)
T ss_dssp             CCE---ECC----CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGG
T ss_pred             eEe---eee----cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCC
Confidence            321   111    122246789999999997777667777777 544433322222233467889999999977777778


Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      +.|.+||............       ....+.+++++++|.++++...++.|.+|+......            ......
T Consensus       171 ~~i~~~~~~~~~~~~~~~~-------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~------------~~~~~~  231 (270)
T 1rwi_B          171 NRVVKLEAESNNQVVLPFT-------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS------------TVLPFT  231 (270)
T ss_dssp             TEEEEECTTTCCEEECCCS-------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC------------EECCCC
T ss_pred             CEEEEEecCCCceEeeccc-------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc------------eeeccC
Confidence            8999999876554322111       224578899999998888888888999999765421            111112


Q ss_pred             cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        279 HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +...+.+++++++|+++++..     .++.|+++
T Consensus       232 ~~~~p~~i~~~~~g~l~v~~~-----~~~~v~~~  260 (270)
T 1rwi_B          232 GLNTPLAVAVDSDRTVYVADR-----GNDRVVKL  260 (270)
T ss_dssp             SCSCEEEEEECTTCCEEEEEG-----GGTEEEEE
T ss_pred             CCCCceeEEECCCCCEEEEEC-----CCCEEEEE
Confidence            335688999999999888884     44458764

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.71  E-value=4.4e-15  Score=121.75  Aligned_cols=178  Identities=9%  Similarity=-0.017  Sum_probs=115.0

Q ss_pred             CCCcEEEeeecC-Cccc------------ccccccCCCCCceEEEEeC-CCcEEEEcCC-CCcceeeeeeeecccCCCcc
Q psy15191         73 LDKTAILWKYVS-EGNY------------LPYHMRDDSKQLHLLSCSM-DKSIIVWAPD-PTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        73 ~dg~i~vw~~~~-~~~~------------~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~  137 (312)
                      .++.+.+|++.. ++..            .+....+++++.+++++.. ++.|.+|++. +++........   ...+..
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~---~~~~g~  193 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD---APDPGD  193 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE---CSSTTC
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe---cCCCCC
Confidence            689999999974 4321            1223445788887777654 6789999998 54322221111   112345


Q ss_pred             ceeEEEECCCCCeEEEeec-CCeEEE-e--cccCceee---eec-------ccCC------ceeEEE-ECCCCCEEEEEe
Q psy15191        138 GFYGCKFGPRGDYIIAHGF-QGSLHL-D--VTTWKQIQ---TLP-------CHQL------TITQLA-FSPDDTHLVSVS  196 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~-~~~i~~-d--~~~~~~~~---~~~-------~~~~------~v~~~~-~~~~~~~l~~~~  196 (312)
                      .+..++|+|+|++++++.. ++.+.+ +  ..+.++..   .+.       +|..      .+..++ |+|||++|+++.
T Consensus       194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~  273 (365)
T 1jof_A          194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence            6889999999999888775 677777 3  33444321   111       1222      588999 999999988776


Q ss_pred             cCC------eEEEEEcc-CCCeEEEEe-ccCCCCcccceeeEEEEEcC---CCceEEEeccC-CeEEEEecCCC
Q psy15191        197 RDR------RWGLYKRQ-SSGRLSLVA-CSDKTNGVHKRIIWGVAWSH---DSRYFLTISRD-GVCVVWGLGEP  258 (312)
Q Consensus       197 ~d~------~i~~wd~~-~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~d-g~i~iwd~~~~  258 (312)
                      .+.      .|.+|++. +++...... ...     +...+..++|+|   +|++|++++.+ +.|.+|++...
T Consensus       274 ~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-----~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPT-----PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EESSTTSCCEEEEEEECTTSCEEEEEEEEEC-----SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCCCCCCCeEEEEEECCCCCEEEeeeeeec-----CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            432      89999996 343322111 100     223355689999   89999988864 89999998764

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.71  E-value=1.4e-14  Score=128.63  Aligned_cols=239  Identities=10%  Similarity=-0.062  Sum_probs=157.1

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEE-----EecCCCcEEEeeecCCccc---cc-----ccccCCCCCceEEEEeCCCc-
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLV-----SCSLDKTAILWKYVSEGNY---LP-----YHMRDDSKQLHLLSCSMDKS-  110 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~-----s~~~dg~i~vw~~~~~~~~---~~-----~~~~~~~~~~~l~~~~~d~~-  110 (312)
                      +|...+..++|+|+      |++||     .|+.+..|++||+.+++..   .+     ....+++++..|+.++.+.. 
T Consensus       118 ~~~~~~~~~~~SPD------G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~  191 (695)
T 2bkl_A          118 DGTVSLGTWAVSWD------GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDP  191 (695)
T ss_dssp             SSCEEEEEEEECTT------SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCT
T ss_pred             CCCEEEEEEEECCC------CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCC
Confidence            35557899999999      99998     5566678999999988754   11     33456888889999988776 


Q ss_pred             ------------EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC----eEEE-ecccCceeeee
Q psy15191        111 ------------IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG----SLHL-DVTTWKQIQTL  173 (312)
Q Consensus       111 ------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~-d~~~~~~~~~~  173 (312)
                                  |++|++.+.......   +.....+...+..+.|+|+|++|+..+.++    .+.+ +..+.+.. .+
T Consensus       192 ~~~~~~~~~~~~v~~~~l~t~~~~~~l---v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l  267 (695)
T 2bkl_A          192 SIKVDERPGYTTIRYHTLGTEPSKDTV---VHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LL  267 (695)
T ss_dssp             TSCGGGGGGGCEEEEEETTSCGGGCEE---EECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EE
T ss_pred             CCccccCCCCCEEEEEECCCCchhceE---EEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Ee
Confidence                        999999876532111   111223445678999999999998877665    5666 44433332 33


Q ss_pred             cccCCceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      ..+...+....+ ++|.+++...   .++.|.+||+.+...  ...+....     ....+..++|+ ++.++++...|+
T Consensus       268 ~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~l~~~~~~-~~~lv~~~~~dg  340 (695)
T 2bkl_A          268 VKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-----SSASLLSVSIV-GGHLSLEYLKDA  340 (695)
T ss_dssp             EECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-----SSCEEEEEEEE-TTEEEEEEEETT
T ss_pred             ecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-----CCCeEEEEEEE-CCEEEEEEEECC
Confidence            345555566666 5666444433   257899999987653  22222210     24457788888 778889999999


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ..+||.+.....           ....+..+ ...+..++++|+++.|+...... ...+.|++|
T Consensus       341 ~~~l~~~~~~g~-----------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~v~~~  393 (695)
T 2bkl_A          341 TSEVRVATLKGK-----------PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSF-TTPRQIYKT  393 (695)
T ss_dssp             EEEEEEEETTCC-----------EEEECCCSSSSEECCCBSCTTCSEEEEEEEET-TEEEEEEEE
T ss_pred             EEEEEEEeCCCC-----------eeEEecCCCCeEEEEeecCCCCCEEEEEEcCC-CCCCEEEEE
Confidence            888886653211           34445444 66788899999997666443222 245667665

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.68  E-value=3.1e-13  Score=106.87  Aligned_cols=205  Identities=10%  Similarity=0.078  Sum_probs=139.1

Q ss_pred             EeCCCCceEEEEc------cccCcEEEEEEe-cCcCcCCCCceEEEecC-CCcEEEeeecCCccc---------cccccc
Q psy15191         32 WNGEGGKVLYTLT------NHKSKVMAVKWV-LNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNY---------LPYHMR   94 (312)
Q Consensus        32 w~~~~~~~~~~~~------~h~~~v~~~~~~-~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~---------~~~~~~   94 (312)
                      |+++ ++.+..+.      +|...+..+++. ++      +.++++... ++.|.+||. +++..         .+..+.
T Consensus        56 ~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~------g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~  127 (286)
T 1q7f_A           56 FDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNS------GDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVT  127 (286)
T ss_dssp             ECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTT------TEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEE
T ss_pred             ECCC-CcEEEEecccCCCcccccCceEEEEEcCC------CeEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCceEEE
Confidence            7776 56666664      344678999995 55      666666643 889999994 33321         122233


Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~  173 (312)
                      ..+++.++++...++.|.+||...   .......   ...+...+..++++|+++++++...++.|.+ |.. .+....+
T Consensus       128 ~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~  200 (286)
T 1q7f_A          128 VDNKGRIIVVECKVMRVIIFDQNG---NVLHKFG---CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQI  200 (286)
T ss_dssp             ECTTSCEEEEETTTTEEEEECTTS---CEEEEEE---CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEE
T ss_pred             EeCCCCEEEEECCCCEEEEEcCCC---CEEEEeC---CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEE
Confidence            456777777777788999999653   2222221   1123346889999999997777777888888 543 3344444


Q ss_pred             cc--cCCceeEEEECCCCCEEEEEecCC-eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191        174 PC--HQLTITQLAFSPDDTHLVSVSRDR-RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       174 ~~--~~~~v~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i  250 (312)
                      ..  +...+..++++|+|+++++...++ .|.+||.. .+.+..+....     ....+.+++++|+|+++++ +.|+.|
T Consensus       201 ~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~-----~~~~~~~i~~~~~g~l~vs-~~~~~v  273 (286)
T 1q7f_A          201 GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKV-----KHAQCFDVALMDDGSVVLA-SKDYRL  273 (286)
T ss_dssp             SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESS-----CCSCEEEEEEETTTEEEEE-ETTTEE
T ss_pred             ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccC-----CCCcceeEEECCCCcEEEE-CCCCeE
Confidence            32  235788999999999888887776 99999964 55555554321     2224678999999997777 568999


Q ss_pred             EEEecCCC
Q psy15191        251 VVWGLGEP  258 (312)
Q Consensus       251 ~iwd~~~~  258 (312)
                      ++|++...
T Consensus       274 ~v~~~~~~  281 (286)
T 1q7f_A          274 YIYRYVQL  281 (286)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcccc
Confidence            99997653

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.67  E-value=3e-14  Score=115.91  Aligned_cols=218  Identities=8%  Similarity=0.063  Sum_probs=141.7

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---C--cEEEeeecCCcccc------cccccCCCCC
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---K--TAILWKYVSEGNYL------PYHMRDDSKQ   99 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g--~i~vw~~~~~~~~~------~~~~~~~~~~   99 (312)
                      .|+.++++.. .+    ..+..++|+|+      |++|+.++.+   +  .|.+|++.+++...      +....++|++
T Consensus        47 ~~d~~~~~~~-~l----~~~~~~~~SpD------g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg  115 (347)
T 2gop_A           47 IENLKNNARR-FI----ENATMPRISPD------GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDS  115 (347)
T ss_dssp             EEETTTCCEE-EE----ESCEEEEECTT------SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTS
T ss_pred             EEeCCCCceE-Ec----ccCCCeEECCC------CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCC
Confidence            3677777643 33    46888999999      9998887654   3  37777877665422      3345568888


Q ss_pred             ceEEEEeCC---------------------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE
Q psy15191        100 LHLLSCSMD---------------------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII  152 (312)
Q Consensus       100 ~~l~~~~~d---------------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  152 (312)
                      ..|+.++.+                           ..|.+||+.+++.  .....     . . .+..+.|+|+| +++
T Consensus       116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~-----~-~-~~~~~~~spdg-~~~  185 (347)
T 2gop_A          116 RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFE-----K-P-RFSSGIWHRDK-IVV  185 (347)
T ss_dssp             SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EEEEE-----E-E-TTCEEEEETTE-EEE
T ss_pred             CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--Eeeec-----C-C-CcccccCCCCe-EEE
Confidence            888877642                           5688999887542  11111     1 1 56789999999 777


Q ss_pred             EeecCC---------eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC--------CeEEEEEccCCCeEEE
Q psy15191        153 AHGFQG---------SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD--------RRWGLYKRQSSGRLSL  214 (312)
Q Consensus       153 ~~~~~~---------~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~  214 (312)
                      ++..++         .+.+ |  +.+... +..+ ..+..+  +|||++|+.++.+        ..|.+||  +.+.. .
T Consensus       186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~-l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~  256 (347)
T 2gop_A          186 NVPHREIIPQYFKFWDIYIWE--DGKEEK-MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM-G  256 (347)
T ss_dssp             EEECCCSSCCSSCCEEEEEEE--TTEEEE-EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-E
T ss_pred             EEecccccccccccccEEEeC--CCceEE-eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceE-e
Confidence            765432         3333 5  343332 2223 444444  8999998887754        3677777  33332 2


Q ss_pred             EeccCCCCcccceeeEE-EEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191        215 VACSDKTNGVHKRIIWG-VAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT  293 (312)
Q Consensus       215 ~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  293 (312)
                      +...      +...+.. +.|+ ++ ++++++.++.++|| +..+             ....+..+...|.+++|+|  .
T Consensus       257 l~~~------~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-------------~~~~~~~~~~~v~~~~~s~--~  312 (347)
T 2gop_A          257 ILDE------VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-------------EIKPIAKGRHWIMGFDVDE--I  312 (347)
T ss_dssp             SSTT------CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-------------SEEEEECSSSEEEEEEESS--S
T ss_pred             cccc------CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-------------ceEEEecCCCeEEeeeeeC--c
Confidence            2211      4556776 8999 88 88999999999999 8732             1233444577899999999  6


Q ss_pred             eEEEEecCC
Q psy15191        294 LLASACKAT  302 (312)
Q Consensus       294 ~l~s~s~d~  302 (312)
                      ++++++.++
T Consensus       313 ~~~~~~~~~  321 (347)
T 2gop_A          313 VVYLKETAT  321 (347)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEcCCC
Confidence            777776544

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.66  E-value=7.2e-14  Score=112.73  Aligned_cols=250  Identities=8%  Similarity=-0.023  Sum_probs=158.2

Q ss_pred             EeCCCCceEEEEc------cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccccCCCC
Q psy15191         32 WNGEGGKVLYTLT------NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSK   98 (312)
Q Consensus        32 w~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~   98 (312)
                      +|+++++....+.      ........+.+..       ++++++...++.|.+||..+++...       +..+..+++
T Consensus        22 ~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-------~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~   94 (328)
T 3dsm_A           22 YDPATCEVENEVFYRANGFKLGDVAQSMVIRD-------GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD   94 (328)
T ss_dssp             EETTTTEEECSHHHHHHSSCCBSCEEEEEEET-------TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEET
T ss_pred             EECCCCEEhhhhHhhhcCcccCccceEEEEEC-------CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCC
Confidence            6888887765442      1224467777743       4667777778999999999887632       112222345


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee--cCCeEEE-ecccCceeeeecc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG--FQGSLHL-DVTTWKQIQTLPC  175 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~-d~~~~~~~~~~~~  175 (312)
                      +..+++...++.|.+||..+.+  ...........+....+..+++  ++..++++.  .++.|.+ |..+.+....+..
T Consensus        95 g~lyv~~~~~~~v~~iD~~t~~--~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~  170 (328)
T 3dsm_A           95 EKAYVTQIWDYRIFIINPKTYE--ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI  170 (328)
T ss_dssp             TEEEEEEBSCSEEEEEETTTTE--EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred             CeEEEEECCCCeEEEEECCCCe--EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence            5444444478999999998744  3333332221111224556777  445555554  3778877 9998888777663


Q ss_pred             cCCceeEEEECCCCCEEEEEecC----------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        176 HQLTITQLAFSPDDTHLVSVSRD----------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                       ......++++|+|++++++..+          +.|.++|..+.+....+...      ....+..++++|++++|+.+.
T Consensus       171 -g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~------~g~~p~~la~~~d~~~lyv~~  243 (328)
T 3dsm_A          171 -GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK------LGDWPSEVQLNGTRDTLYWIN  243 (328)
T ss_dssp             -SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC------TTCCCEEEEECTTSCEEEEES
T ss_pred             -CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC------CCCCceeEEEecCCCEEEEEc
Confidence             3445789999999977776654          78999999887766555432      123578899999999888776


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEEEecCCCcccceEEeC
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .  .|.+||..++.....          ..+.........++++| ++.++++...|- ..++.|.+|
T Consensus       244 ~--~v~~~d~~t~~~~~~----------~~~~~~~~~p~gi~vdp~~g~lyva~~~~y-~~~~~V~v~  298 (328)
T 3dsm_A          244 N--DIWRMPVEADRVPVR----------PFLEFRDTKYYGLTVNPNNGEVYVADAIDY-QQQGIVYRY  298 (328)
T ss_dssp             S--SEEEEETTCSSCCSS----------CSBCCCSSCEEEEEECTTTCCEEEEECTTS-SSEEEEEEE
T ss_pred             c--EEEEEECCCCceeee----------eeecCCCCceEEEEEcCCCCeEEEEccccc-ccCCEEEEE
Confidence            5  899999877642110          01111245678999999 556666652222 134557664

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.66  E-value=1.3e-13  Score=111.37  Aligned_cols=216  Identities=10%  Similarity=0.053  Sum_probs=151.7

Q ss_pred             EEEeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--cc----------------cc
Q psy15191         30 VKWNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--NY----------------LP   90 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~~----------------~~   90 (312)
                      +.|++++++.+..+. ++-..+..+++.|+      |+++++...++.|++|+.....  ..                .+
T Consensus        72 ~~~d~~~g~~~~~~~~~~~~~p~gia~d~~------g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P  145 (329)
T 3fvz_A           72 LVIDPNNAEILQSSGKNLFYLPHGLSIDTD------GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQP  145 (329)
T ss_dssp             EEECTTTCCEEEEECTTTCSSEEEEEECTT------SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSE
T ss_pred             EEEECCCCeEEeccCCCccCCceEEEECCC------CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCC
Confidence            558998888887765 45568999999988      8889998889999999986542  11                12


Q ss_pred             ccccCCC-CCceEEEEe-CCCcEEEEcCCCCcceeeeeeeeccc-----CCCccceeEEEECCC-CCeEEEeecCCeEEE
Q psy15191         91 YHMRDDS-KQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEV-----GGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL  162 (312)
Q Consensus        91 ~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~  162 (312)
                      ..+..++ ++.++++.+ .++.|++|+...   ..+........     ..+...+..++++|+ +.++++...++.|++
T Consensus       146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~  222 (329)
T 3fvz_A          146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC  222 (329)
T ss_dssp             EEEEECTTTCCEEEEECSSCCEEEEECTTS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cEEEEeCCCCeEEEEeCCCCCeEEEEcCCC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence            2334466 666777775 689999999542   22222211100     122345789999998 676777777888888


Q ss_pred             -ecccCceeeeec--ccCCceeEEEECC------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191        163 -DVTTWKQIQTLP--CHQLTITQLAFSP------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA  233 (312)
Q Consensus       163 -d~~~~~~~~~~~--~~~~~v~~~~~~~------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~  233 (312)
                       +..+++.+..+.  .+...+..++++|      +++.+++...+..|++||..+.+.+..+.....    +...+.+++
T Consensus       223 ~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~----~~~~p~~ia  298 (329)
T 3fvz_A          223 FKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK----HFDMPHDIV  298 (329)
T ss_dssp             EETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS----CCSSEEEEE
T ss_pred             EECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC----ccCCeeEEE
Confidence             777777776663  4566788999999      333333333455899999998887776642111    455688999


Q ss_pred             EcCCCceEEEeccCCeEEEEecCCC
Q psy15191        234 WSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       234 ~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ++|+|.++++...++.|++|++...
T Consensus       299 ~~~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          299 ASEDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             ECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred             ECCCCCEEEEECCCCEEEEEeCCcc
Confidence            9999998899999999999997643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.63  E-value=4e-13  Score=105.38  Aligned_cols=204  Identities=12%  Similarity=0.060  Sum_probs=145.7

Q ss_pred             CceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN  135 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  135 (312)
                      +++|++++.|+.|.+||.++++..         ........+++.+++  +.++.|..||. +++..+.  ...    +.
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~--~~~----~~   75 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN--IAA----PA   75 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE--EEC----CT
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE--EcC----CC
Confidence            589999999999999999787752         123334467777777  45778999998 5443333  221    12


Q ss_pred             ccceeEEEECCCCCeEEEeec-CCeEEE-ecccCceeeeec------ccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGF-QGSLHL-DVTTWKQIQTLP------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                      ...+.++.+.++|+.+++.+. ++.+.. |. +.+.+..+.      .+......+++.++|+++++...++.|..||..
T Consensus        76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~  154 (276)
T 3no2_A           76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN  154 (276)
T ss_dssp             TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence            345788999999999998876 666655 54 455544433      122345567789999999999999999999998


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC------c
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG------Y  281 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~  281 (312)
                       ++.+..+...        ..+.++...++|+++++++.++.|..+|..++.            .+.++..+.      .
T Consensus       155 -G~~~w~~~~~--------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~------------~~w~~~~~~~~~~~l~  213 (276)
T 3no2_A          155 -GQLLNSVKLS--------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR------------IVRRVNANDIEGVQLF  213 (276)
T ss_dssp             -SCEEEEEECS--------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC------------EEEEEEGGGSBSCCCS
T ss_pred             -CCEEEEEECC--------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc------------EEEEecCCCCCCcccc
Confidence             7777776642        234567788999999999988899999988763            344443221      2


Q ss_pred             ceeEEEeccCCCeEEEEe
Q psy15191        282 EIYSLAASHDGTLLASAC  299 (312)
Q Consensus       282 ~v~~~~~s~~~~~l~s~s  299 (312)
                      .+.+++..++|.++++..
T Consensus       214 ~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          214 FVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             EEEEEEECTTSCEEEEEE
T ss_pred             ccccceEcCCCCEEEEec
Confidence            367888889998888874

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.63  E-value=1.9e-13  Score=111.18  Aligned_cols=195  Identities=10%  Similarity=0.133  Sum_probs=125.5

Q ss_pred             CCcEEEeeecCCcccc---cccccCCCCCceEEEEeCC---C--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         74 DKTAILWKYVSEGNYL---PYHMRDDSKQLHLLSCSMD---K--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        74 dg~i~vw~~~~~~~~~---~~~~~~~~~~~~l~~~~~d---~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      ++.|.+||+.+++...   +....++|++..|+..+.+   +  .|.+|++.+++...+..        ... +..++|+
T Consensus        42 ~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~--------~~~-~~~~~ws  112 (347)
T 2gop_A           42 ENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE--------AKN-IRSLEWN  112 (347)
T ss_dssp             EEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE--------ESE-EEEEEEC
T ss_pred             cceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc--------CCC-ccceeEC
Confidence            5678999988776532   3335668889888877654   2  37788887644322211        112 8899999


Q ss_pred             CCCCeEEEeecC---------------------------CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec
Q psy15191        146 PRGDYIIAHGFQ---------------------------GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR  197 (312)
Q Consensus       146 ~~~~~l~~~~~~---------------------------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  197 (312)
                      |+++.|+.++.+                           ..+.+ |+.+.+....+.. . .+..++|+||| +++++..
T Consensus       113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~  189 (347)
T 2gop_A          113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPH  189 (347)
T ss_dssp             TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEEC
T ss_pred             CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEec
Confidence            999998887642                           34655 7777665344443 3 78899999999 7777765


Q ss_pred             CC-------eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC--------CeEEEEecCCCCCCc
Q psy15191        198 DR-------RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD--------GVCVVWGLGEPPTEE  262 (312)
Q Consensus       198 d~-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~  262 (312)
                      ++       ...+|.+. ......+..       + ..+..+  +|+|++|+.++.+        ..|++||  .+.   
T Consensus       190 ~~~~~~~~~~~~l~~~d-~~~~~~l~~-------~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~---  253 (347)
T 2gop_A          190 REIIPQYFKFWDIYIWE-DGKEEKMFE-------K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE---  253 (347)
T ss_dssp             CCSSCCSSCCEEEEEEE-TTEEEEEEE-------E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---
T ss_pred             ccccccccccccEEEeC-CCceEEecc-------C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCc---
Confidence            42       44555554 333333332       2 334333  9999998877644        3688887  321   


Q ss_pred             ccccccccceeEEeeccCcceeE-EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYS-LAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                               ......++...+.. +.|+ ++ ++++++.+     +.++||
T Consensus       254 ---------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~-----~~~~l~  288 (347)
T 2gop_A          254 ---------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEE-----GSVNLY  288 (347)
T ss_dssp             ---------EEESSTTCCSEEEEEEEET-TE-EEEEEEET-----TEEEEE
T ss_pred             ---------eEeccccCCcccCCccEEc-Cc-EEEEEecC-----CcEEEE
Confidence                     22223455677886 9999 88 88888544     448876

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.62  E-value=1.2e-13  Score=111.73  Aligned_cols=235  Identities=9%  Similarity=-0.001  Sum_probs=144.5

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----cccccccCCCCCceEEEEeCCCcEEEEcCCCCcce
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL  122 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  122 (312)
                      ..|.+++|+++      +..++..+.++.++.|.-..-..     ..+....+++++.+++++..++.|.+||..+.+..
T Consensus         6 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~   79 (333)
T 2dg1_A            6 QDLPTLFYSGK------SNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK   79 (333)
T ss_dssp             CCCCBCCSCGG------GGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred             cccceeeecCC------ccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence            34667777777      66666667788888883221110     11223334567777778888999999998875432


Q ss_pred             eeeeeeecccCCCccceeEEEECCCCCeEEEeecC----CeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEE
Q psy15191        123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----GSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       123 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~  195 (312)
                      ...  .     .+...+.+++++|+++++++...+    +.|.+ |..+......+.  .+...+..++++|+|+++++.
T Consensus        80 ~~~--~-----~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~  152 (333)
T 2dg1_A           80 RPF--V-----SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD  152 (333)
T ss_dssp             EEE--E-----CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred             EEe--e-----CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence            211  1     234568999999999977776665    46666 766655442222  234578999999999877766


Q ss_pred             ec------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecCCCCCCccccccc
Q psy15191        196 SR------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       196 ~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      ..      .+.|..+|..+.+......        ....+..++|+|++++| ++.+.++.|++||+............ 
T Consensus       153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~-  223 (333)
T 2dg1_A          153 FRGYSTNPLGGVYYVSPDFRTVTPIIQ--------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA-  223 (333)
T ss_dssp             CCCBTTBCCEEEEEECTTSCCEEEEEE--------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE-
T ss_pred             ccccccCCCceEEEEeCCCCEEEEeec--------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc-
Confidence            53      2456666655433332222        22346789999999855 45566889999998643211000000 


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                        .....+.++ ..+..++++++|+++++...++     .|.+|
T Consensus       224 --~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~-----~v~~~  259 (333)
T 2dg1_A          224 --TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQG-----RVLVF  259 (333)
T ss_dssp             --EEEEECCSS-SEEEEEEEBTTCCEEEEEETTT-----EEEEE
T ss_pred             --eEEEecCCC-CCCCceEECCCCCEEEEEcCCC-----EEEEE
Confidence              011112222 4678899999999888874433     37664

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.62  E-value=4.5e-13  Score=104.90  Aligned_cols=232  Identities=11%  Similarity=-0.017  Sum_probs=146.2

Q ss_pred             CCCceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec
Q psy15191          4 EPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV   83 (312)
Q Consensus         4 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~   83 (312)
                      .|..+.....|+...+.....+.|.  .|++.++........+...+.++++.++      ++++++.. ++.|.+||..
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~p~~i~~~~~------g~l~v~~~-~~~i~~~d~~   95 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVV--KLATGSTGTTVLPFNGLYQPQGLAVDGA------GTVYVTDF-NNRVVTLAAG   95 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEE--EECC-----EECCCCSCCSCCCEEECTT------CCEEEEET-TTEEEEECTT
T ss_pred             CccceEECCCCCEEEEccCCCCcEE--EecCCCcccceEeeCCcCCcceeEECCC------CCEEEEcC-CCEEEEEeCC
Confidence            4444544455653321333444553  2566544432222233456788999887      88777766 8899999977


Q ss_pred             CCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee
Q psy15191         84 SEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG  155 (312)
Q Consensus        84 ~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  155 (312)
                      .....        .+..+...+++.++++...++.|.+|+..+.....  .     .......+.+++++++++.+++..
T Consensus        96 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~--~-----~~~~~~~p~~i~~~~~g~l~v~~~  168 (270)
T 1rwi_B           96 SNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV--L-----PFTGLNDPDGVAVDNSGNVYVTDT  168 (270)
T ss_dssp             CSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE--C-----CCCSCCSCCCEEECTTCCEEEEEG
T ss_pred             CceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe--e-----ccccCCCceeEEEeCCCCEEEEEC
Confidence            65432        12222335566667776778889999765432111  1     112223578899999998777666


Q ss_pred             cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        156 FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       156 ~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                      .++.|.+ |............+...+..++++++|..+++...++.|.+||........ ...      .+...+.++++
T Consensus       169 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~------~~~~~p~~i~~  241 (270)
T 1rwi_B          169 DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF------TGLNTPLAVAV  241 (270)
T ss_dssp             GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC------CSCSCEEEEEE
T ss_pred             CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ecc------CCCCCceeEEE
Confidence            6777777 665544433322333668899999999877777778899999987544332 111      02345789999


Q ss_pred             cCCCceEEEeccCCeEEEEecCCC
Q psy15191        235 SHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       235 ~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      +|+|+++++...++.|+++++...
T Consensus       242 ~~~g~l~v~~~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          242 DSDRTVYVADRGNDRVVKLTSLEH  265 (270)
T ss_dssp             CTTCCEEEEEGGGTEEEEECCCGG
T ss_pred             CCCCCEEEEECCCCEEEEEcCCCc
Confidence            999998899999999999988665

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.61  E-value=8.1e-12  Score=99.13  Aligned_cols=222  Identities=10%  Similarity=-0.016  Sum_probs=149.2

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCceEEEEeCCCcEEE
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      +..+...+.++++.++      |+++++...++.|.+||.. +....         +..+...+++..+++...++.|..
T Consensus        10 ~~~~~~~~~~i~~d~~------g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~   82 (299)
T 2z2n_A           10 LTNQDTGPYGITVSDK------GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGR   82 (299)
T ss_dssp             CCSSSCCEEEEEECTT------SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred             CCCcCCCccceEECCC------CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence            4445678999999888      8888777778899999877 43311         122233456666666666788999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCceeEEEECCCCCE
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFSPDDTH  191 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~  191 (312)
                      |+... + .  ....   .......+..+++.++++.+++...++.+.. |. +...... .......+..++++++++.
T Consensus        83 ~~~~g-~-~--~~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l  154 (299)
T 2z2n_A           83 ITKKG-I-I--KEYT---LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL  154 (299)
T ss_dssp             ECTTS-C-E--EEEE---CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred             ECCCC-c-E--EEEe---CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE
Confidence            98762 1 1  1111   1123456889999999988777666777776 55 3333322 1223456899999999988


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP  271 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  271 (312)
                      +++...++.|..||. +.+... +....     ....+.+++++++++++++...++.|.+||. ++..           
T Consensus       155 ~v~~~~~~~i~~~~~-~g~~~~-~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-----------  215 (299)
T 2z2n_A          155 WFTENQNNAIGRITE-SGDITE-FKIPT-----PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-----------  215 (299)
T ss_dssp             EEEETTTTEEEEECT-TCCEEE-EECSS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-----------
T ss_pred             EEEeCCCCEEEEEcC-CCcEEE-eeCCC-----CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-----------
Confidence            777777789999998 444332 22211     2345778999999998888777889999998 4421           


Q ss_pred             eeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        272 EVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       272 ~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ....+..+...+.+++++++|+++++.
T Consensus       216 ~~~~~~~~~~~~~~i~~~~~g~l~v~~  242 (299)
T 2z2n_A          216 TEFKIPTPNARPHAITAGAGIDLWFTE  242 (299)
T ss_dssp             EEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred             EEEECCCCCCCceeEEECCCCCEEEec
Confidence            111223345678899999999977776

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.60  E-value=9.3e-12  Score=103.26  Aligned_cols=230  Identities=10%  Similarity=-0.010  Sum_probs=147.8

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCC--cEEEEcCCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDK--SIIVWAPDP  118 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~  118 (312)
                      .....|+|.++      ++++++...++.|++||..++....       .. ..+.+++..++++..++  .|.+++...
T Consensus       131 ~~P~~la~d~~------g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~  203 (409)
T 3hrp_A          131 KYMWGIAAVGN------NTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS  203 (409)
T ss_dssp             CCEEEEEECST------TEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred             CCceEEEEeCC------CCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence            46788999888      8888888888999999998765421       12 44466777788887765  688887764


Q ss_pred             CcceeeeeeeecccCC-CccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee----ecccCCce--eEEEECCC-C
Q psy15191        119 TTGLWLETARVGEVGG-NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT----LPCHQLTI--TQLAFSPD-D  189 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~----~~~~~~~v--~~~~~~~~-~  189 (312)
                      ....  ...  ..... ....+.+++++|++..|+++..++.|+. |..+......    ..++...-  ..++|+|+ +
T Consensus       204 ~~~~--~~~--g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g  279 (409)
T 3hrp_A          204 GWAP--TRI--GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS  279 (409)
T ss_dssp             TTCE--EEE--EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred             Ccee--EEe--eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence            3221  111  01111 3455788999995555666777787776 6665543222    11222222  39999995 6


Q ss_pred             CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc--------ccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCC
Q psy15191        190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG--------VHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPT  260 (312)
Q Consensus       190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~  260 (312)
                      .++++-..++.|+.|+....  ...+.+......        ..-.....++++|+|+++++-+ .++.|+.|++..+  
T Consensus       280 ~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G--  355 (409)
T 3hrp_A          280 NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG--  355 (409)
T ss_dssp             EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT--
T ss_pred             EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC--
Confidence            66666667889999987643  333322210000        0123478899999999888888 8899999997665  


Q ss_pred             CcccccccccceeEEeecc---------------CcceeEEEeccCCCeEEEEecCCC
Q psy15191        261 EEDLVQNTLWPEVQKLYGH---------------GYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                                 .+..+.++               -.....++++++|.++++-..++.
T Consensus       356 -----------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~  402 (409)
T 3hrp_A          356 -----------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA  402 (409)
T ss_dssp             -----------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred             -----------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence                       34444443               245789999999988888844433

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.60  E-value=4.1e-11  Score=95.04  Aligned_cols=231  Identities=9%  Similarity=-0.055  Sum_probs=152.0

Q ss_pred             EeCCCCceEEE-EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-c-------ccccccCCCCCceE
Q psy15191         32 WNGEGGKVLYT-LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-Y-------LPYHMRDDSKQLHL  102 (312)
Q Consensus        32 w~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-~-------~~~~~~~~~~~~~l  102 (312)
                      |+++ ++.... +..+...+.++++.++      +.++++...++.|..|+...... .       .+..+...+++.++
T Consensus        41 ~d~~-~~~~~~~~~~~~~~~~~i~~~~~------g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~  113 (299)
T 2z2n_A           41 INLD-GKITEYPLPTPDAKVMCLTISSD------GEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIW  113 (299)
T ss_dssp             ECTT-CCEEEEECSSTTCCEEEEEECTT------SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred             EcCC-CCeEEecCCcccCceeeEEECCC------CCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEE
Confidence            6666 443322 2234567899999888      88888877788899998752211 0       11222234566666


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCce
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTI  180 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v  180 (312)
                      ++...++.|..||. +.+...   ..   .......+..+++.++++.+++...++.+.. |. +.+.... .......+
T Consensus       114 v~~~~~~~i~~~d~-~g~~~~---~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~  185 (299)
T 2z2n_A          114 FTEMNGNRIGRITD-DGKIRE---YE---LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP  185 (299)
T ss_dssp             EEETTTTEEEEECT-TCCEEE---EE---CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred             EEecCCceEEEECC-CCCEEE---ec---CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence            66667788999988 322111   11   1123456889999999987776666677766 66 4444432 22334568


Q ss_pred             eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        181 TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      ..++++++++.+++...++.|.+||. +.... .+....     ....+.+++++++|+++++...++.|..||.. +  
T Consensus       186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g--  255 (299)
T 2z2n_A          186 VGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPT-----PNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N--  255 (299)
T ss_dssp             EEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS-----TTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T--
T ss_pred             eeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCC-----CCCCceeEEECCCCCEEEeccCCceEEEECCC-C--
Confidence            89999999997777667889999998 55432 232211     34568899999999988877778899999973 2  


Q ss_pred             CcccccccccceeEE--eeccCcceeEEEeccCCCeEEEEe
Q psy15191        261 EEDLVQNTLWPEVQK--LYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                                 .+..  +..+...+.++++ ++|+++++.+
T Consensus       256 -----------~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~  284 (299)
T 2z2n_A          256 -----------IIEEYPIQIKSAEPHGICF-DGETIWFAME  284 (299)
T ss_dssp             -----------EEEEEECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred             -----------ceEEEeCCCCCCccceEEe-cCCCEEEEec
Confidence                       1222  2344567899999 9998888763

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.60  E-value=2.1e-11  Score=104.91  Aligned_cols=271  Identities=6%  Similarity=0.018  Sum_probs=174.2

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec--CC
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV--SE   85 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~--~~   85 (312)
                      +|..+.+..++......+.|  ..+|..+++.+.++... ..+..+.|+|+      |+++++++.|+.|.+||+.  +.
T Consensus       160 ~~~~d~~~~~~V~~~~~~~V--~viD~~t~~v~~~i~~g-~~p~~v~~SpD------Gr~lyv~~~dg~V~viD~~~~t~  230 (567)
T 1qks_A          160 MNDWDLENLFSVTLRDAGQI--ALIDGSTYEIKTVLDTG-YAVHISRLSAS------GRYLFVIGRDGKVNMIDLWMKEP  230 (567)
T ss_dssp             CSCCCGGGEEEEEETTTTEE--EEEETTTCCEEEEEECS-SCEEEEEECTT------SCEEEEEETTSEEEEEETTSSSC
T ss_pred             ccccCCCceEEEEeCCCCeE--EEEECCCCeEEEEEeCC-CCccceEECCC------CCEEEEEcCCCeEEEEECCCCCC
Confidence            34444455555555444544  33789999999998743 46779999999      9999999999999999995  54


Q ss_pred             ccc-------ccccccCC----CCCceEEEEe-CCCcEEEEcCCCCcceeeeeeeeccc--CC---C-ccceeEEEECCC
Q psy15191         86 GNY-------LPYHMRDD----SKQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEV--GG---N-TLGFYGCKFGPR  147 (312)
Q Consensus        86 ~~~-------~~~~~~~~----~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~--~~---~-~~~v~~~~~~~~  147 (312)
                      +..       ....+.++    +++.+++++. .+++|.++|..+.+.  +........  ..   | ...+..+..+++
T Consensus       231 ~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~rva~i~~s~~  308 (567)
T 1qks_A          231 TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEPRVAAILASHY  308 (567)
T ss_dssp             CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE--EEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred             cEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE--EEEEeccccccccccccCCCceEEEEEcCC
Confidence            431       12223345    4777766655 558999999887443  333332211  11   1 225778888888


Q ss_pred             CCeEE-EeecCCeEEE-ecccCcee--eeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEec-cCCC
Q psy15191        148 GDYII-AHGFQGSLHL-DVTTWKQI--QTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVAC-SDKT  221 (312)
Q Consensus       148 ~~~l~-~~~~~~~i~~-d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~-~~~~  221 (312)
                      +..++ ....+|.|.+ |..+-+..  ..+ ........+.|+|++++++++. .++.|.++|+.+.+....+.. ....
T Consensus       309 ~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P  387 (567)
T 1qks_A          309 RPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP  387 (567)
T ss_dssp             SSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred             CCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence            66544 4456688887 65543321  122 2334567889999999887765 578999999998877666553 2111


Q ss_pred             CcccceeeEEEEEcCCC-ceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        222 NGVHKRIIWGVAWSHDS-RYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~-~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                         |.+.-..+ ++|++ ..++++. .++.|.++|.......     ...|+.++.+......-..+..+|++++|....
T Consensus       388 ---hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~-----~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~  458 (567)
T 1qks_A          388 ---HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHP-----DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA  458 (567)
T ss_dssp             ---CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred             ---CCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCc-----cccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence               33211112 57874 4445543 4689999998764321     223567787776544445678999999888764

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.59  E-value=3e-12  Score=114.59  Aligned_cols=237  Identities=12%  Similarity=0.006  Sum_probs=149.9

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCC-----CcEEEeeecCCccccc-------ccccCCCCCceEEEEeCCCc---
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLD-----KTAILWKYVSEGNYLP-------YHMRDDSKQLHLLSCSMDKS---  110 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~vw~~~~~~~~~~-------~~~~~~~~~~~l~~~~~d~~---  110 (312)
                      |...+..++|+|+      |++||.++.+     ..|++||+.+++....       ....++++ ..|+.++.++.   
T Consensus       161 ~~~~~~~~~~SPD------G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~  233 (741)
T 1yr2_A          161 GATALDAWAASDD------GRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEG  233 (741)
T ss_dssp             --EEEEEEEECTT------SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred             CCEEEEeEEECCC------CCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccc
Confidence            3346888999998      9998877544     4699999998876321       23456777 77877776554   


Q ss_pred             -----------EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ecccC--ceee
Q psy15191        111 -----------IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DVTTW--KQIQ  171 (312)
Q Consensus       111 -----------i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~~~~--~~~~  171 (312)
                                 |++|++.+........   .....+...+..+.|+|+|++|+..+.++     .+.+ |+.+.  +...
T Consensus       234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv---~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~  310 (741)
T 1yr2_A          234 QAFQALNYNQTVWLHRLGTPQSADQPV---FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT  310 (741)
T ss_dssp             -----CCCCCEEEEEETTSCGGGCEEE---ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred             cccccCCCCCEEEEEECCCCchhCEEE---eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence                       8899987654221111   11122333578899999999988877544     6777 76655  3123


Q ss_pred             eecccCCceeEEEECCCCCEEEEEecC----CeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        172 TLPCHQLTITQLAFSPDDTHLVSVSRD----RRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      .+..+...+.... +|+|+.|+..+.+    +.|.+||+.+. .....+...      +...+..++++ ++.++++...
T Consensus       311 ~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~------~~~~l~~~~~~-~~~lv~~~~~  382 (741)
T 1yr2_A          311 ALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE------SKDNLESVGIA-GNRLFASYIH  382 (741)
T ss_dssp             EEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC------CSSEEEEEEEE-BTEEEEEEEE
T ss_pred             EecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC------CCCeEEEEEEE-CCEEEEEEEE
Confidence            3333444444443 4889988877653    45999998875 233333322      33346678887 6678888889


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+..+||.+.....           ....+.. +...+..++++|+++.|+...... ...+.|++|
T Consensus       383 dg~~~l~~~~~~g~-----------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~i~~~  437 (741)
T 1yr2_A          383 DAKSQVLAFDLDGK-----------PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSF-TQPATVLAL  437 (741)
T ss_dssp             TTEEEEEEEETTSC-----------EEEECBCSSSCEEEEEECCBTCSCEEEEEEET-TEEEEEEEE
T ss_pred             CCEEEEEEEeCCCC-----------ceeeccCCCCeEEEEeecCCCCCEEEEEEcCC-CCCCEEEEE
Confidence            99877776542211           3444443 356788999999987665432211 235566654

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.58  E-value=5.1e-12  Score=101.12  Aligned_cols=227  Identities=12%  Similarity=0.059  Sum_probs=141.5

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEE-------ecCCCcEEEeeecCCcccc------------cccccCCCC-CceEE
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVS-------CSLDKTAILWKYVSEGNYL------------PYHMRDDSK-QLHLL  103 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s-------~~~dg~i~vw~~~~~~~~~------------~~~~~~~~~-~~~l~  103 (312)
                      ...-....+++|.++      +.++++       +..++.|.+||..+++...            +..+...++ +. +.
T Consensus        14 ~~~~~~~~~~~~~~~------g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~   86 (314)
T 1pjx_A           14 TEDIPGAEGPVFDKN------GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LF   86 (314)
T ss_dssp             ECCCTTCEEEEECTT------SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EE
T ss_pred             hccCCCccCceECCC------CCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EE
Confidence            333456778899877      777777       6778899999977665421            122233455 54 44


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC---------------CeEEE-ecccC
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ---------------GSLHL-DVTTW  167 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------------~~i~~-d~~~~  167 (312)
                      .++..+.|.+||.. ++..... .. .........+.+++++++++++++...+               +.+.. +.. .
T Consensus        87 v~~~~~~l~~~d~~-g~~~~~~-~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g  162 (314)
T 1pjx_A           87 VADMRLGLLVVQTD-GTFEEIA-KK-DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G  162 (314)
T ss_dssp             EEETTTEEEEEETT-SCEEECC-SB-CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred             EEECCCCEEEEeCC-CCEEEEE-ec-cCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence            44444578889887 4322110 00 0001123457899999999887776554               34544 544 3


Q ss_pred             ceeeeecccCCceeEEEEC----CCCCEEEEE-ecCCeEEEEEccCCCeEE---EEeccCCCCcccc-eeeEEEEEcCCC
Q psy15191        168 KQIQTLPCHQLTITQLAFS----PDDTHLVSV-SRDRRWGLYKRQSSGRLS---LVACSDKTNGVHK-RIIWGVAWSHDS  238 (312)
Q Consensus       168 ~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~i~~wd~~~~~~~~---~~~~~~~~~~~~~-~~v~~~~~~~~~  238 (312)
                      +..... .+......++++    |+++.++.+ ..++.|.+||......+.   .+....    .+. ..+..++++++|
T Consensus       163 ~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----~~~~~~p~~i~~d~~G  237 (314)
T 1pjx_A          163 QMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP----GTHEGGADGMDFDEDN  237 (314)
T ss_dssp             CEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC----CCSSCEEEEEEEBTTC
T ss_pred             CEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC----CCCCCCCCceEECCCC
Confidence            333222 233456889999    999766554 567899999986322211   111100    022 457789999999


Q ss_pred             ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      +++++...++.|.+||..++.            .+..+..+...+.+++|+|+|+.|..+
T Consensus       238 ~l~v~~~~~~~i~~~d~~~g~------------~~~~~~~~~~~~~~i~~~~dg~~l~v~  285 (314)
T 1pjx_A          238 NLLVANWGSSHIEVFGPDGGQ------------PKMRIRCPFEKPSNLHFKPQTKTIFVT  285 (314)
T ss_dssp             CEEEEEETTTEEEEECTTCBS------------CSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred             CEEEEEcCCCEEEEEcCCCCc------------EeEEEeCCCCCceeEEECCCCCEEEEE
Confidence            998888788899999976442            234444556778999999999955444

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.57  E-value=4.2e-12  Score=102.37  Aligned_cols=203  Identities=7%  Similarity=-0.020  Sum_probs=139.2

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC------CC-----CCc
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD------DS-----KQL  100 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------~~-----~~~  100 (312)
                      ||+.+++.+.++.. ......++++++      ++.+++...++.|.+||..+++.........      .+     ++.
T Consensus        69 iD~~t~~~~~~i~~-~~~p~~i~~~~~------g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~  141 (328)
T 3dsm_A           69 IDINTFKEVGRITG-FTSPRYIHFLSD------EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGK  141 (328)
T ss_dssp             EETTTCCEEEEEEC-CSSEEEEEEEET------TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETT
T ss_pred             EECcccEEEEEcCC-CCCCcEEEEeCC------CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECC
Confidence            78999999998863 467899999988      7666666578999999998876532111111      11     223


Q ss_pred             eEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----------CeEEE-ecccC
Q psy15191        101 HLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----------GSLHL-DVTTW  167 (312)
Q Consensus       101 ~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~i~~-d~~~~  167 (312)
                      .++++.  .++.|.++|+.+.+  .......      ...+..++++|+|++++++..+          +.|.+ |..+.
T Consensus       142 ~lyv~~~~~~~~v~viD~~t~~--~~~~i~~------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~  213 (328)
T 3dsm_A          142 YVYVNCWSYQNRILKIDTETDK--VVDELTI------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF  213 (328)
T ss_dssp             EEEEEECTTCCEEEEEETTTTE--EEEEEEC------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred             EEEEEcCCCCCEEEEEECCCCe--EEEEEEc------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC
Confidence            444444  48899999998844  3333321      1234678999999977776554          67777 98888


Q ss_pred             ceeeeeccc-CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEe-
Q psy15191        168 KQIQTLPCH-QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTI-  244 (312)
Q Consensus       168 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~-  244 (312)
                      ++...+... ......++++|++++|+++..  .|.+||..+.+........     ........++++| ++.++++. 
T Consensus       214 ~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~-----~~~~~p~gi~vdp~~g~lyva~~  286 (328)
T 3dsm_A          214 TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLE-----FRDTKYYGLTVNPNNGEVYVADA  286 (328)
T ss_dssp             EEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBC-----CCSSCEEEEEECTTTCCEEEEEC
T ss_pred             eEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeec-----CCCCceEEEEEcCCCCeEEEEcc
Confidence            877665422 246889999999998888755  8999999876542100000     0134578899999 56666666 


Q ss_pred             ---ccCCeEEEEecC
Q psy15191        245 ---SRDGVCVVWGLG  256 (312)
Q Consensus       245 ---~~dg~i~iwd~~  256 (312)
                         ..++.|.+||..
T Consensus       287 ~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          287 IDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             TTSSSEEEEEEECTT
T ss_pred             cccccCCEEEEECCC
Confidence               578899999987

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.57  E-value=3.7e-12  Score=101.22  Aligned_cols=199  Identities=10%  Similarity=0.000  Sum_probs=132.0

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc------------cccccCCCC
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL------------PYHMRDDSK   98 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~------------~~~~~~~~~   98 (312)
                      .|+++++  ...+..+...+.+++++|+      |+++++...++.|.+||..+++...            +......++
T Consensus        54 ~~~~~~~--~~~~~~~~~~~~~l~~~~d------g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~  125 (296)
T 3e5z_A           54 AWSDDGQ--LSPEMHPSHHQNGHCLNKQ------GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD  125 (296)
T ss_dssp             EEETTSC--EEEEESSCSSEEEEEECTT------CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred             EEECCCC--eEEEECCCCCcceeeECCC------CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence            3677666  5667677788999999998      8888888778899999987765421            112334567


Q ss_pred             CceEEE----Ee-------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEE
Q psy15191         99 QLHLLS----CS-------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH  161 (312)
Q Consensus        99 ~~~l~~----~~-------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~  161 (312)
                      +.++++    ++             ..+.|..++.. ++.   ...     ..+...+..++|+|+++.+++...++.|.
T Consensus       126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~---~~~-----~~~~~~~~gi~~s~dg~~lv~~~~~~~i~  196 (296)
T 3e5z_A          126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL---SAP-----IRDRVKPNGLAFLPSGNLLVSDTGDNATH  196 (296)
T ss_dssp             SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE---EEE-----ECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred             CCEEEECCccccccccccccccccCCCcEEEEECCC-CCE---EEe-----ecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence            766666    22             12345555544 211   111     13344568899999999986667778888


Q ss_pred             E-ecc-cCce---eeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE-c
Q psy15191        162 L-DVT-TWKQ---IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW-S  235 (312)
Q Consensus       162 ~-d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~  235 (312)
                      + ++. +..+   ...+..+...+..++++++|+++++.  ++.|.+||.. ++.+..+..       +.. +++++| +
T Consensus       197 ~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~-------~~~-~~~~~f~~  265 (296)
T 3e5z_A          197 RYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT-------PQT-TSNLCFGG  265 (296)
T ss_dssp             EEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC-------SSC-CCEEEEES
T ss_pred             EEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC-------CCC-ceeEEEEC
Confidence            7 554 3333   22222345567789999999866655  8899999987 556555554       334 788999 5


Q ss_pred             CCCceEEEeccCCeEEEEecCCC
Q psy15191        236 HDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       236 ~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      |+++.|+.++.++ +.-++..+.
T Consensus       266 ~d~~~L~v~t~~~-l~~~~~~~~  287 (296)
T 3e5z_A          266 PEGRTLYMTVSTE-FWSIETNVR  287 (296)
T ss_dssp             TTSCEEEEEETTE-EEEEECSCC
T ss_pred             CCCCEEEEEcCCe-EEEEEcccc
Confidence            8998888887764 545555443

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.54  E-value=7.3e-11  Score=93.75  Aligned_cols=228  Identities=11%  Similarity=0.001  Sum_probs=143.5

Q ss_pred             ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      ..+..-..+..|+|+     ++.++++...++.|..||..++...      .+......+++.+++ +. ++.|.+||..
T Consensus         9 ~~~~~~~Egp~w~~~-----~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~   81 (297)
T 3g4e_A            9 PENCRCGESPVWEEV-----SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVA-TI-GTKFCALNWK   81 (297)
T ss_dssp             CCCCSBEEEEEEETT-----TTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETT
T ss_pred             ccCCccccCCeEECC-----CCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEE-EE-CCeEEEEECC
Confidence            334445667888885     2566777777889999998776541      122333456666444 44 5679999988


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-----------CeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-----------GSLHL-DVTTWKQIQTLPCHQLTITQLAF  185 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~  185 (312)
                      +++...+...   ........+..++++|+|+++++....           +.+.. +.. .+... ........+.++|
T Consensus        82 ~g~~~~~~~~---~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~  156 (297)
T 3g4e_A           82 EQSAVVLATV---DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDW  156 (297)
T ss_dssp             TTEEEEEEEC---CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEE
T ss_pred             CCcEEEEEec---CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEE
Confidence            7543322211   111123457899999999976654321           23333 432 22222 2223345688999


Q ss_pred             CCCCCEEEE-EecCCeEEEEEcc--CCCeE--EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        186 SPDDTHLVS-VSRDRRWGLYKRQ--SSGRL--SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       186 ~~~~~~l~~-~~~d~~i~~wd~~--~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      +|+++.|+. .+.++.|.+||+.  ++...  ..+....    .....+..++++++|++.++...++.|..||..++. 
T Consensus       157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~----~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~-  231 (297)
T 3g4e_A          157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE----KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK-  231 (297)
T ss_dssp             CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC----GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC-
T ss_pred             cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC----CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce-
Confidence            999987654 4567899999974  33321  1111100    033467889999999988888888899999987653 


Q ss_pred             CcccccccccceeEEeeccCcceeEEEec-cCCCeEEEEe
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAAS-HDGTLLASAC  299 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~s  299 (312)
                                 .+..+..+...+++++|. |+++.|..++
T Consensus       232 -----------~~~~i~~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          232 -----------RLQTVKLPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             -----------EEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred             -----------EEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence                       566666676789999998 8887665444

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.53  E-value=5.8e-13  Score=108.30  Aligned_cols=185  Identities=12%  Similarity=0.091  Sum_probs=130.2

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  128 (312)
                      +++.+++++.      ..++++|+.++ +++|++...+...    ..... .               ..   ...  .. 
T Consensus        39 ~~nlLais~~------~gll~a~~~~~-l~v~~~~~l~~~~----~~~~~-~---------------~~---~~~--~~-   85 (388)
T 1xip_A           39 SLQNLDISNS------KSLFVAASGSK-AVVGELQLLRDHI----TSDST-P---------------LT---FKW--EK-   85 (388)
T ss_dssp             CCBCEEEETT------TTEEEEEETTE-EEEEEHHHHHHHH----HSSSC-C---------------CC---CSE--EE-
T ss_pred             cccEEEEcCC------CCEEEEeCCCE-EEEEEhhHhhhhh----ccccc-c---------------cc---ceE--Ee-
Confidence            6888888888      77888888774 5668875443211    00000 0               00   000  01 


Q ss_pred             ecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        129 VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       129 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                           .... |+.++|  ++++|+++ .++.|++ |+.+.........|...+.++.+.+..  +++++.||.|.+||+.
T Consensus        86 -----~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~  154 (388)
T 1xip_A           86 -----EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLR  154 (388)
T ss_dssp             -----ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETT
T ss_pred             -----eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEcc
Confidence                 1234 899999  99999998 8899999 766665555566677888888877543  8889999999999999


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe------e---c
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL------Y---G  278 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~---~  278 (312)
                      +.....           +...|++++|+|+|  ++.|..||.+++|+.......          ...++      .   +
T Consensus       155 ~~~~~~-----------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~----------~k~~I~~Pp~~~~~~~  211 (388)
T 1xip_A          155 TKSTKQ-----------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEME----------KQFEFSLPSELEELPV  211 (388)
T ss_dssp             TCCEEE-----------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEE----------EEEEECCCHHHHTSCT
T ss_pred             CCcccc-----------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccc----------ccceecCCcccccccC
Confidence            766542           34469999999999  778899999999987665210          02233      2   3


Q ss_pred             cCcceeEEEeccCCCeEEEEec
Q psy15191        279 HGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      |...|.++.|.+++.++++-..
T Consensus       212 ~~~~V~sI~wl~~~~flv~y~~  233 (388)
T 1xip_A          212 EEYSPLSVTILSPQDFLAVFGN  233 (388)
T ss_dssp             TTSEEEEEEESSSSEEEEEEEC
T ss_pred             CCeeEEEEEEecCCeEEEEEcC
Confidence            7788999999999999987654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.51  E-value=3.6e-11  Score=103.39  Aligned_cols=183  Identities=14%  Similarity=0.030  Sum_probs=131.3

Q ss_pred             CceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      +.++++...+++|.++|..+++..       .+.....++++.++++++.++.|.+||+.+.+...+...+.      ..
T Consensus       167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~------G~  240 (567)
T 1qks_A          167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI------GS  240 (567)
T ss_dssp             GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC------CS
T ss_pred             ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec------CC
Confidence            567888888999999999887663       22344568899999999999999999996222333333331      22


Q ss_pred             ceeEEEEC----CCCCeEEEeec-CCeEEE-ecccCceeeeecc----------c-CCceeEEEECCCCCEE-EEEecCC
Q psy15191        138 GFYGCKFG----PRGDYIIAHGF-QGSLHL-DVTTWKQIQTLPC----------H-QLTITQLAFSPDDTHL-VSVSRDR  199 (312)
Q Consensus       138 ~v~~~~~~----~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~~----------~-~~~v~~~~~~~~~~~l-~~~~~d~  199 (312)
                      ....++|+    |+|++++++.. ++.+.+ |..+.+.+..+..          | ...+..+..++++..+ +....+|
T Consensus       241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence            35789999    69999887765 478888 9999888776541          1 1267788888876654 4455679


Q ss_pred             eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCC
Q psy15191        200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPP  259 (312)
Q Consensus       200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~  259 (312)
                      .|.++|......+......      .......+.|+|++++++++. .++.|.++|+.++.
T Consensus       321 ~v~~vd~~~~~~~~v~~i~------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k  375 (567)
T 1qks_A          321 KILLVDYTDLNNLKTTEIS------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK  375 (567)
T ss_dssp             EEEEEETTCSSEEEEEEEE------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred             eEEEEecCCCccceeeeee------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence            9999999876544333321      223456789999999876654 67899999998763

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.51  E-value=1.8e-10  Score=91.29  Aligned_cols=221  Identities=8%  Similarity=-0.061  Sum_probs=146.2

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCceEEEEeCCCcEEEEc
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQLHLLSCSMDKSIIVWA  115 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~~l~~~~~d~~i~i~d  115 (312)
                      .....+.++++.++      ++++++...++.|.+||.. ++...         +..+...+++.++++...++.|..+|
T Consensus        17 ~~~~~p~~i~~d~~------g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d   89 (300)
T 2qc5_A           17 IPDSGPYGITSSED------GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLS   89 (300)
T ss_dssp             STTCCEEEEEECTT------SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             CCCCCcceeeECCC------CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEEC
Confidence            34567889999888      8888887778899999877 43211         12222345666666666678899998


Q ss_pred             CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCceeEEEECCCCCEEE
Q psy15191        116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~  193 (312)
                      .. ++..   ...   .......+.++++.++++++++...++.+.. +.. .+.... .......+..++++++++.++
T Consensus        90 ~~-g~~~---~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v  161 (300)
T 2qc5_A           90 KK-GGFT---EYP---LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWF  161 (300)
T ss_dssp             TT-SCEE---EEE---CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred             CC-CCeE---Eec---CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEE
Confidence            77 3221   111   1123356889999999987777666677766 655 443322 222345788999999999777


Q ss_pred             EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccccee
Q psy15191        194 SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV  273 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  273 (312)
                      +...++.|..+|. +.+... +....     ....+.+++++++++++++....+.|.+|+. .+..           ..
T Consensus       162 ~~~~~~~i~~~~~-~g~~~~-~~~~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-----------~~  222 (300)
T 2qc5_A          162 TENQNNSIGRITN-TGKLEE-YPLPT-----NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI-----------SE  222 (300)
T ss_dssp             EETTTTEEEEECT-TCCEEE-EECSS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-----------EE
T ss_pred             EecCCCeEEEECC-CCcEEE-eeCCC-----CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE-----------EE
Confidence            6666789999998 444332 32211     3345789999999988887777888999987 3210           11


Q ss_pred             EEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        274 QKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       274 ~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ..+..+...+.+++++++|+++++..
T Consensus       223 ~~~~~~~~~~~~i~~d~~g~l~v~~~  248 (300)
T 2qc5_A          223 YDIPTPNARPHAITAGKNSEIWFTEW  248 (300)
T ss_dssp             EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred             EECCCCCCCceEEEECCCCCEEEecc
Confidence            12223456688999999998777763

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.50  E-value=1.5e-11  Score=96.49  Aligned_cols=180  Identities=11%  Similarity=0.053  Sum_probs=127.6

Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      .+..|++++.++.|.+||.++++..+....      +....+.++.+.|+|+++++  .++.+.. |. +.+.+..+..+
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~------~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~   74 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL------EKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP   74 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEEC------CTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCC------CccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC
Confidence            346899999999999999988654443321      11135788999999998883  3555666 77 67777777654


Q ss_pred             -CCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        177 -QLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       177 -~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                       ...+.++.+.|+|+++++.+. ++.+..+|. +++.+..+........ +......+++.++|+++++...++.|..||
T Consensus        75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~-~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d  152 (276)
T 3no2_A           75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIER-PHAQFRQINKNKKGNYLVPLFATSEVREIA  152 (276)
T ss_dssp             TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSS-GGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred             CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCc-ccccccCceECCCCCEEEEecCCCEEEEEC
Confidence             357889999999999999887 778888886 4666555543221111 222345667899999999999999999999


Q ss_pred             cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      .. +.            .+.++..+ ..+.++...++|+++++++.++
T Consensus       153 ~~-G~------------~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~  186 (276)
T 3no2_A          153 PN-GQ------------LLNSVKLS-GTPFSSAFLDNGDCLVACGDAH  186 (276)
T ss_dssp             TT-SC------------EEEEEECS-SCCCEEEECTTSCEEEECBTTS
T ss_pred             CC-CC------------EEEEEECC-CCccceeEcCCCCEEEEeCCCC
Confidence            87 52            44444433 3456778889999888885443

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.49  E-value=2.3e-11  Score=99.32  Aligned_cols=216  Identities=7%  Similarity=-0.017  Sum_probs=138.2

Q ss_pred             CCceEeCCCCeEEEEeccC-CCceEEEEEeCCCCceEEE-EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeee
Q psy15191          5 PGDVVNGEGGKVLYTLTNH-KSKVMAVKWNGEGGKVLYT-LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY   82 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~h-~~~v~~~~w~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~   82 (312)
                      |..+.-..+|+.++..... .+.|  ..|+..+++.+.. +.. . ....+.+.|+    + ...+++.+.||.+.+|++
T Consensus       110 p~~i~~spdg~~l~v~n~~~~~~v--~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~----~-~~~~~~~~~dg~~~~v~~  180 (361)
T 2oiz_A          110 DGLFRQTTDGKFIVLQNASPATSI--GIVDVAKGDYVEDVTAA-A-GCWSVIPQPN----R-PRSFMTICGDGGLLTINL  180 (361)
T ss_dssp             GGGEEECTTSSEEEEEEESSSEEE--EEEETTTTEEEEEEGGG-T-TEEEEEECTT----S-SSEEEEEETTSSEEEEEE
T ss_pred             cceEEECCCCCEEEEECCCCCCeE--EEEECCCCcEEEEEecC-C-CcceeEEcCC----C-CeeEEEECCCCcEEEEEE
Confidence            4455555566666665432 2333  2267777777766 542 2 2233456665    1 257788888999999988


Q ss_pred             cC-Cccc-------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecc-----cCCCccceeEEE
Q psy15191         83 VS-EGNY-------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGE-----VGGNTLGFYGCK  143 (312)
Q Consensus        83 ~~-~~~~-------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~  143 (312)
                      .. ++..             ...+....+++..++..+.++.|.++|+...............     ..........++
T Consensus       181 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a  260 (361)
T 2oiz_A          181 GEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG  260 (361)
T ss_dssp             CTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred             CCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence            65 3222             0011112234456666778899999998764433222211100     000011122378


Q ss_pred             ECCCCCeEEEeec-----------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC--
Q psy15191        144 FGPRGDYIIAHGF-----------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS--  209 (312)
Q Consensus       144 ~~~~~~~l~~~~~-----------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--  209 (312)
                      |+|+++.++++..           .+.|.+ |..+.+.+..+..+.  +..++|+|||++|++++. +.|.+||..+.  
T Consensus       261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l  337 (361)
T 2oiz_A          261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP  337 (361)
T ss_dssp             EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred             EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence            9999888887654           346777 999999998888665  999999999999998886 99999999988  


Q ss_pred             CeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191        210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSR  239 (312)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  239 (312)
                      +.+..+..       .......++++|+|+
T Consensus       338 ~~~~~i~~-------~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          338 KLLRTIEG-------AAEASLQVQFHPVGG  360 (361)
T ss_dssp             EEEEEETT-------SCSSEEEEEECCCSC
T ss_pred             eeeEEecc-------CCCCcEEEEecCCCC
Confidence            66665532       445567899999985

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.49  E-value=3.7e-10  Score=92.42  Aligned_cols=263  Identities=11%  Similarity=0.013  Sum_probs=157.6

Q ss_pred             CCCeEEEEecc-CCCce-EEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEE
Q psy15191         12 EGGKVLYTLTN-HKSKV-MAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAIL   79 (312)
Q Consensus        12 ~~~~~~~~~~~-h~~~v-~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~v   79 (312)
                      ..++.++.... ....+ ....+|+.+++.+.++.....+  .++++|+      +++++.+.          .++.|.+
T Consensus        30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spD------g~~lyv~n~~~~~~~rg~~~~~v~v  101 (373)
T 2mad_H           30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHS------GSEFALASTSFSRIAKGKRTDYVEV  101 (373)
T ss_pred             CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCC------CCEEEEEeccccccccCCCCCeEEE
Confidence            45667777664 33322 3344888999999888765444  8899988      88888775          3678999


Q ss_pred             eeecCCcccc---------------cccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeee-eeecccCCCccceeE
Q psy15191         80 WKYVSEGNYL---------------PYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLET-ARVGEVGGNTLGFYG  141 (312)
Q Consensus        80 w~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~v~~  141 (312)
                      +|..+.+...               ......++++.+|+++..  ++.|.++| .+.+.  ... ...   .      .+
T Consensus       102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~---~------~~  169 (373)
T 2mad_H          102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSS---P------TC  169 (373)
T ss_pred             EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCC---C------ce
Confidence            9998765432               112345788888888764  47899999 87442  222 221   1      11


Q ss_pred             EEECCCC-CeEEEeecCCeEEE-ecccCceeeeec-----ccCCc-eeEEEECCCCCEEEEEecCCeEEEEEccCCCeE-
Q psy15191        142 CKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQTLP-----CHQLT-ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL-  212 (312)
Q Consensus       142 ~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-  212 (312)
                      +.+.|++ +.+++.+.||.+.+ |. +.+......     ....+ .....+.+++..++..+..+.+.+.|+...... 
T Consensus       170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v  248 (373)
T 2mad_H          170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN  248 (373)
T ss_pred             EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE
Confidence            3344544 33455556666665 66 555542211     11111 123456666665555557889999998754322 


Q ss_pred             -EEEeccCC---CCcccceeeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        213 -SLVACSDK---TNGVHKRIIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       213 -~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                       ..+.....   ...........++++|+++.++.+..          .+.|.++|+.+..            .+..+..
T Consensus       249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~------------vv~~i~~  316 (373)
T 2mad_H          249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ------------TSSQISL  316 (373)
T ss_pred             eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE------------EEEEEEC
Confidence             11111000   00001222344788999987776543          3579999988763            4455543


Q ss_pred             cCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191        279 HGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW  312 (312)
                       .....+++|+|||+ +++++..    .++.|.++
T Consensus       317 -g~~p~~i~~s~Dg~~~l~v~~~----~~~~V~Vi  346 (373)
T 2mad_H          317 -GHDVDAISVAQDGGPDLYALSA----GTEVLHIY  346 (373)
T ss_pred             -CCCcCeEEECCCCCeEEEEEcC----CCCeEEEE
Confidence             33578999999999 6777642    24447654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.49  E-value=9.6e-10  Score=87.10  Aligned_cols=232  Identities=10%  Similarity=-0.030  Sum_probs=148.4

Q ss_pred             EeCCCCceEE-EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCce
Q psy15191         32 WNGEGGKVLY-TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLH  101 (312)
Q Consensus        32 w~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~  101 (312)
                      |++. ++... .+..+...+..+++.++      +.++++...++.|..+|.. ++..         .+..+...+++.+
T Consensus        46 ~~~~-~~~~~~~~~~~~~~~~~i~~~~~------g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l  117 (300)
T 2qc5_A           46 LDQS-GRIKEFEVPTPDAKVMCLIVSSL------GDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDI  117 (300)
T ss_dssp             ECTT-SCEEEEECSSTTCCEEEEEECTT------SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCE
T ss_pred             ECCC-CceEEEECCCCCCcceeEEECCC------CCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCE
Confidence            5665 44332 22333467889998887      8888877777889999876 4321         1112223456666


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCc
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLT  179 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~  179 (312)
                      +++...++.|..++.. .+..   ...   .......+..+++.++++.+++...++.|.. +. +.+.... ...+...
T Consensus       118 ~v~~~~~~~i~~~~~~-g~~~---~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~  189 (300)
T 2qc5_A          118 WFTQLNGDRIGKLTAD-GTIY---EYD---LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAA  189 (300)
T ss_dssp             EEEETTTTEEEEECTT-SCEE---EEE---CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCC
T ss_pred             EEEccCCCeEEEECCC-CCEE---Ecc---CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCC
Confidence            6666667888888876 3221   111   1223456789999999996666555666766 55 3333321 1233456


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +..++++++++.+++....+.|.+||. +.... .+....     ....+.+++++++|+++++...++.|..||.. +.
T Consensus       190 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~  261 (300)
T 2qc5_A          190 PVGITSGNDGALWFVEIMGNKIGRITT-TGEIS-EYDIPT-----PNARPHAITAGKNSEIWFTEWGANQIGRITND-NT  261 (300)
T ss_dssp             EEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS-----TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred             cceEEECCCCCEEEEccCCCEEEEEcC-CCcEE-EEECCC-----CCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc
Confidence            889999999987777666788999998 33332 222211     33457899999999988877778899999873 21


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      .           ....+......+.++++.++|+++++.
T Consensus       262 ~-----------~~~~~~~~~~~~~~i~~~~~g~l~v~~  289 (300)
T 2qc5_A          262 I-----------QEYQLQTENAEPHGITFGKDGSVWFAL  289 (300)
T ss_dssp             E-----------EEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred             E-----------EEEECCccCCccceeEeCCCCCEEEEc
Confidence            0           111223334568899999999977766

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.49  E-value=1.1e-11  Score=110.50  Aligned_cols=187  Identities=10%  Similarity=-0.026  Sum_probs=122.1

Q ss_pred             ccccCCCCCceEEEEeCCC-----cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe------
Q psy15191         91 YHMRDDSKQLHLLSCSMDK-----SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS------  159 (312)
Q Consensus        91 ~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------  159 (312)
                      ....++|++.+|+.+..++     .|++||+.+++..... ..       ...+..++|+|||+.|+.+..++.      
T Consensus       128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~-------~~~~~~~~wspDg~~l~~~~~~~~~~~~~~  199 (710)
T 2xdw_A          128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LE-------RVKFSCMAWTHDGKGMFYNAYPQQDGKSDG  199 (710)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EE-------EECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred             EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-cc-------CcccceEEEEeCCCEEEEEEECCccccccc
Confidence            3445688888888766543     8999999985533211 11       112567999999999998887654      


Q ss_pred             ----------EEE-ecccCcee----eeecccCCceeEEEECCCCCEEEEEec-----CCeEEEEEccC------CC-eE
Q psy15191        160 ----------LHL-DVTTWKQI----QTLPCHQLTITQLAFSPDDTHLVSVSR-----DRRWGLYKRQS------SG-RL  212 (312)
Q Consensus       160 ----------i~~-d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~------~~-~~  212 (312)
                                |++ ++.+....    .....+...+..+.|+|||++|+..+.     +..|++||+.+      +. ..
T Consensus       200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~  279 (710)
T 2xdw_A          200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW  279 (710)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred             cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence                      777 66554421    122234556789999999999988765     56899999986      32 34


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccC----CeEEEEecCCCCCCcccccccccceeEEeeccCc--ceeEE
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY--EIYSL  286 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~  286 (312)
                      ..+..       +...+.. .|+|+|+.|+..+.+    +.|.+||+..+...          ....+..|..  .+.++
T Consensus       280 ~~l~~-------~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----------~~~~l~~~~~~~~~~~~  341 (710)
T 2xdw_A          280 VKLID-------NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES----------KWKVLVPEHEKDVLEWV  341 (710)
T ss_dssp             EEEEC-------SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG----------GCEEEECCCSSCEEEEE
T ss_pred             EEeeC-------CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----------cceeccCCCCCCeEEEE
Confidence            44443       2222333 478888877765543    36999998765310          1233444433  68889


Q ss_pred             EeccCCCeEEEEecCCC
Q psy15191        287 AASHDGTLLASACKATK  303 (312)
Q Consensus       287 ~~s~~~~~l~s~s~d~~  303 (312)
                      +|++++.++++...|+.
T Consensus       342 ~~~~~~~lv~~~~~~g~  358 (710)
T 2xdw_A          342 ACVRSNFLVLCYLHDVK  358 (710)
T ss_dssp             EEETTTEEEEEEEETTE
T ss_pred             EEEcCCEEEEEEEECCE
Confidence            99988888888855543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.48  E-value=6e-11  Score=94.61  Aligned_cols=230  Identities=11%  Similarity=-0.007  Sum_probs=142.3

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~  109 (312)
                      ..+..+...........|+|+      ++ ++++...++.|..|+.. ++..       .+.....++++.++++...++
T Consensus        35 ~~~~~l~~~~~~~egp~~~~~------g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~  107 (305)
T 3dr2_A           35 ARLLTLYDQATWSEGPAWWEA------QRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLVHCEHGRR  107 (305)
T ss_dssp             CCCEEEECCCSSEEEEEEEGG------GTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEEEEETTTT
T ss_pred             CceEEEecCCcCccCCeEeCC------CCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEEEEECCCC
Confidence            344555555667889999998      77 67787788999999874 3321       122233456776555555567


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE----eec-------------CCeEEE-ecccCceee
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA----HGF-------------QGSLHL-DVTTWKQIQ  171 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------~~~i~~-d~~~~~~~~  171 (312)
                      .|.+|+.. ++...+....   .......+..++++|+|+++++    |..             .+.|.. |..+.+...
T Consensus       108 ~v~~~~~~-g~~~~~~~~~---~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~  183 (305)
T 3dr2_A          108 AITRSDAD-GQAHLLVGRY---AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR  183 (305)
T ss_dssp             EEEEECTT-SCEEEEECEE---TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred             EEEEECCC-CCEEEEEecc---CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence            89999875 3222111111   0011234678999999998876    321             234444 665555443


Q ss_pred             eecccCCceeEEEECCCCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191        172 TLPCHQLTITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      ..  .......++|+||++.|+.+...      +.|.+|++.... +.........   ....+..++++++|++.++. 
T Consensus       184 ~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~---~~~~pdgi~~d~~G~lwv~~-  256 (305)
T 3dr2_A          184 MA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV---PDGLPDGFCVDRGGWLWSSS-  256 (305)
T ss_dssp             EE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC---SSSCCCSEEECTTSCEEECC-
T ss_pred             Ee--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC---CCCCCCeEEECCCCCEEEec-
Confidence            32  33456789999999988777665      789999987543 2111110000   12234568999999965544 


Q ss_pred             cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      .+ .|.+|+....             .+..+..+. .+.+++|+|+++.|..++.
T Consensus       257 ~~-gv~~~~~~g~-------------~~~~~~~~~-~~~~~~f~~d~~~L~it~~  296 (305)
T 3dr2_A          257 GT-GVCVFDSDGQ-------------LLGHIPTPG-TASNCTFDQAQQRLFITGG  296 (305)
T ss_dssp             SS-EEEEECTTSC-------------EEEEEECSS-CCCEEEECTTSCEEEEEET
T ss_pred             CC-cEEEECCCCC-------------EEEEEECCC-ceeEEEEeCCCCEEEEEcC
Confidence            44 4999987432             445554444 5889999999987877743

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.47  E-value=2.9e-10  Score=91.51  Aligned_cols=221  Identities=13%  Similarity=0.008  Sum_probs=136.4

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcce
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL  122 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  122 (312)
                      -..+..|+|+     ++.++++...++.|..||..+++..      .+......+++.++++ +.+ .|.+||..+++..
T Consensus        50 ~~egp~~~~~-----~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~  122 (326)
T 2ghs_A           50 LGEGPTFDPA-----SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLT  122 (326)
T ss_dssp             BEEEEEEETT-----TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEE
T ss_pred             CCcCCeEeCC-----CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEE
Confidence            4567889886     2456677777889999998776532      1222333455655554 444 4899998775432


Q ss_pred             eeeeeeecccCCCccceeEEEECCCCCeEEEeec------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191        123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       123 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  195 (312)
                      .+...   ........+.+++++|+|+++++...      .+.+.. +  +.+... +.........++|+|+++.++.+
T Consensus       123 ~~~~~---~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~  196 (326)
T 2ghs_A          123 LHAEL---ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFV  196 (326)
T ss_dssp             EEECS---STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEE
T ss_pred             EEeeC---CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEE
Confidence            22111   00112346889999999997665432      234444 5  333322 22233456789999999876554


Q ss_pred             -ecCCeEEEEEcc--CC-Ce--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccc
Q psy15191        196 -SRDRRWGLYKRQ--SS-GR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL  269 (312)
Q Consensus       196 -~~d~~i~~wd~~--~~-~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  269 (312)
                       +.++.|.+||+.  ++ ..  ...+.....    ....+..++++++|.++++...++.|.+||.. +.          
T Consensus       197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~----~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~----------  261 (326)
T 2ghs_A          197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTG----IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN----------  261 (326)
T ss_dssp             ETTTCEEEEEEBCTTTCCBSSCCEEEEECTT----SSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC----------
T ss_pred             ECCCCEEEEEEcccccCCcccCceEEEECCC----CCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CC----------
Confidence             457899999986  33 21  111211100    23346789999999988877677889999873 31          


Q ss_pred             cceeEEeeccCcceeEEEec-cCCCeEEEEe
Q psy15191        270 WPEVQKLYGHGYEIYSLAAS-HDGTLLASAC  299 (312)
Q Consensus       270 ~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~s  299 (312)
                        .+..+..+...+++++|+ ++++.|..++
T Consensus       262 --~~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          262 --HIARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             --EEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             --EEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence              455555666679999998 8887665444

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.42  E-value=2.3e-11  Score=108.09  Aligned_cols=191  Identities=10%  Similarity=0.001  Sum_probs=119.1

Q ss_pred             cccccCCCCCceEE-----EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe-----
Q psy15191         90 PYHMRDDSKQLHLL-----SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-----  159 (312)
Q Consensus        90 ~~~~~~~~~~~~l~-----~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----  159 (312)
                      +....++|++.+|+     .|+.+..|++||+.+++... . .   .....  ....++|+|||+.|+.++.+..     
T Consensus       123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~-~---~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~  195 (695)
T 2bkl_A          123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-V-D---VIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKV  195 (695)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-S-C---CBSCC--TTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred             EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-C-c---ccCcc--cccceEEecCCCEEEEEEecCCCCCcc
Confidence            33456688998888     34445689999999855320 0 0   11111  1257899999999998887664     


Q ss_pred             --------EEE-ecccCc----eeeeecccCCceeEEEECCCCCEEEEEecCC----eEEEEEccCCCeEEEEeccCCCC
Q psy15191        160 --------LHL-DVTTWK----QIQTLPCHQLTITQLAFSPDDTHLVSVSRDR----RWGLYKRQSSGRLSLVACSDKTN  222 (312)
Q Consensus       160 --------i~~-d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~  222 (312)
                              |++ ++.+..    ++.....+...+..+.|+|||++|+..+.++    .|+++|..+.... .+..     
T Consensus       196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~-----  269 (695)
T 2bkl_A          196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVK-----  269 (695)
T ss_dssp             GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEE-----
T ss_pred             ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eeec-----
Confidence                    777 665544    2222234556788999999999998887666    6777765544333 3332     


Q ss_pred             cccceeeEEEEEcCCCceEEEec---cCCeEEEEecCCCCCCcccccccccceeEEeecc--CcceeEEEeccCCCeEEE
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH--GYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s  297 (312)
                        +...+....+ ++|.+++.+.   .++.|.+||+..+...       .   ...+..+  ...+.+++|+ ++.++++
T Consensus       270 --~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~-------~---~~~l~~~~~~~~l~~~~~~-~~~lv~~  335 (695)
T 2bkl_A          270 --GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA-------S---WKEIVPEDSSASLLSVSIV-GGHLSLE  335 (695)
T ss_dssp             --CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG-------G---CEEEECCCSSCEEEEEEEE-TTEEEEE
T ss_pred             --CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc-------C---CeEEecCCCCCeEEEEEEE-CCEEEEE
Confidence              2333445556 5666444444   2578999998765210       1   1233333  4567888988 7778888


Q ss_pred             EecCCCcccceEEeC
Q psy15191        298 ACKATKPEHAAIIIW  312 (312)
Q Consensus       298 ~s~d~~~~dg~i~iW  312 (312)
                      ...|+     ..+||
T Consensus       336 ~~~dg-----~~~l~  345 (695)
T 2bkl_A          336 YLKDA-----TSEVR  345 (695)
T ss_dssp             EEETT-----EEEEE
T ss_pred             EEECC-----EEEEE
Confidence            85444     46665

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.42  E-value=9.2e-12  Score=101.29  Aligned_cols=139  Identities=6%  Similarity=0.026  Sum_probs=103.2

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEEecccCc---------eee-eecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWK---------QIQ-TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                      ++..+++++...++++|+.++.+..++.+.+         ... ....+.. |+.++|  |+++|+++ .++.|++||++
T Consensus        39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~  114 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE  114 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred             cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence            5888999999999999999876666333222         111 1223566 999999  99999998 88999999998


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEE
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA  287 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  287 (312)
                      +.........       +...+.++.+.+..  +++++.||.|.+||+..+.            .. .   +...|++++
T Consensus       115 sl~~~~~~~~-------~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~------------~~-~---~~~~Vs~v~  169 (388)
T 1xip_A          115 ELSEFRTVTS-------FEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKS------------TK-Q---LAQNVTSFD  169 (388)
T ss_dssp             STTCEEEEEE-------CSSCEEEEEECSSE--EEEEETTSEEEEEETTTCC------------EE-E---EEESEEEEE
T ss_pred             hhhccCccce-------eecceeeEEecCCC--EEEEECCCCEEEEEccCCc------------cc-c---ccCCceEEE
Confidence            8775554443       55567777776543  8888999999999998763            11 1   456899999


Q ss_pred             eccCCCeEEEEecCCCcccceEEeC
Q psy15191        288 ASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       288 ~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |||+|  ++.|..|++     |++|
T Consensus       170 WSpkG--~~vg~~dg~-----i~~~  187 (388)
T 1xip_A          170 VTNSQ--LAVLLKDRS-----FQSF  187 (388)
T ss_dssp             ECSSE--EEEEETTSC-----EEEE
T ss_pred             EcCCc--eEEEEcCCc-----EEEE
Confidence            99999  677865555     8765

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.41  E-value=3.4e-10  Score=91.83  Aligned_cols=225  Identities=10%  Similarity=0.041  Sum_probs=136.4

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEec--CCCcEEEeeecCCccc--------------ccccccCCCCCceEEEEeC----
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCS--LDKTAILWKYVSEGNY--------------LPYHMRDDSKQLHLLSCSM----  107 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vw~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~----  107 (312)
                      ..+..++++++      |+++++..  .++.++||.+.++...              .+..+..++++.++++-..    
T Consensus        17 ~~p~~va~~~~------g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~   90 (343)
T 2qe8_A           17 LAPGNITLTPD------GRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSK   90 (343)
T ss_dssp             SCEEEEEECTT------SCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHT
T ss_pred             CCcceEEECCC------CCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcC
Confidence            67889999888      88888864  2343566665433221              1222233455554444333    


Q ss_pred             -CCcEEEEcCCCCcceeeeeeeec-ccCCCccceeEEEECCCCCeE-EEee---cCCeEEE-ecccCceeeeeccc----
Q psy15191        108 -DKSIIVWAPDPTTGLWLETARVG-EVGGNTLGFYGCKFGPRGDYI-IAHG---FQGSLHL-DVTTWKQIQTLPCH----  176 (312)
Q Consensus       108 -d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~---~~~~i~~-d~~~~~~~~~~~~~----  176 (312)
                       ++.|.+||+.+++  .+...... ....+...+..+++++++..+ ++..   .++.|.+ |..+.+....+..|    
T Consensus        91 ~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~  168 (343)
T 2qe8_A           91 SVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA  168 (343)
T ss_dssp             SCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred             CCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence             5789999998744  22222221 111233456889999865554 4433   4667766 77666554433221    


Q ss_pred             -------------------------CCceeEEEECCCCCEEEEEecCC-eEEEEEccCCC--e---------EEEEeccC
Q psy15191        177 -------------------------QLTITQLAFSPDDTHLVSVSRDR-RWGLYKRQSSG--R---------LSLVACSD  219 (312)
Q Consensus       177 -------------------------~~~v~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~--~---------~~~~~~~~  219 (312)
                                               ...+..|+|+|+++.|+.+..++ .+..++.....  .         +....   
T Consensus       169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g---  245 (343)
T 2qe8_A          169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS---  245 (343)
T ss_dssp             CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE---
T ss_pred             ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc---
Confidence                                     12368899999999888887665 55555542110  0         01110   


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEE
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s  297 (312)
                           +......++++++|.++++...++.|.+||...+             .+..+..  +...+.+++|.++|+++++
T Consensus       246 -----~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G-------------~~~~~~~~~~~~~p~~va~~~~g~l~v~  307 (343)
T 2qe8_A          246 -----EKPICDGISIDKDHNIYVGDLAHSAIGVITSADR-------------AYKLLVTDEKLSWTDSFNFGSDGYLYFD  307 (343)
T ss_dssp             -----ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-------------EEEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred             -----cCCCCceEEECCCCCEEEEccCCCeEEEEECCCC-------------CEEEEEECCceecCCeeEECCCCcEEEE
Confidence                 2224557999999999999999999999998443             1222221  2456889999999998888


Q ss_pred             EecC
Q psy15191        298 ACKA  301 (312)
Q Consensus       298 ~s~d  301 (312)
                      .+..
T Consensus       308 ~~~~  311 (343)
T 2qe8_A          308 CNQL  311 (343)
T ss_dssp             ECCG
T ss_pred             eCcc
Confidence            8643

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.41  E-value=3.5e-09  Score=86.65  Aligned_cols=211  Identities=7%  Similarity=-0.043  Sum_probs=130.8

Q ss_pred             EeCCCCceEEEEccc-------cCcEEEEEEecCcCcCCCCceEEEecC--CCcEEEeeecCCccccc-ccccC-----C
Q psy15191         32 WNGEGGKVLYTLTNH-------KSKVMAVKWVLNTSLDPEHKDLVSCSL--DKTAILWKYVSEGNYLP-YHMRD-----D   96 (312)
Q Consensus        32 w~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~~~~l~s~~~--dg~i~vw~~~~~~~~~~-~~~~~-----~   96 (312)
                      ||+.+++.+.++.-.       ......+.|+|+      |++|+.+..  ++.|.++| .+++.... .-.+.     .
T Consensus       102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD------G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~  174 (373)
T 2mad_H          102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN------NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHP  174 (373)
T ss_pred             EECCCCcEEEEEECCCccccccCCCccceEECCC------CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEe
Confidence            566666666665421       123446788887      999988764  47899999 88776433 22211     1


Q ss_pred             CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc--eeeee
Q psy15191         97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTL  173 (312)
Q Consensus        97 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~  173 (312)
                      .....+++.+.||.+.++|. +.+........ ....+.........+.+++..++..+..+.+.+ |..+..  ....+
T Consensus       175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~  252 (373)
T 2mad_H          175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVG-AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI  252 (373)
T ss_pred             CCCceEEEEcCCCCEEEEEC-CCcEEEEEecc-ccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence            12235667778999999999 64433111100 000111111223456666655554456777776 664332  11221


Q ss_pred             cc----------cCCceeEEEECCCCCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191        174 PC----------HQLTITQLAFSPDDTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA  233 (312)
Q Consensus       174 ~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~  233 (312)
                      .-          .......+.++|+++.++.+..          ++.|.++|+.+.+.+..+..        .....+++
T Consensus       253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--------g~~p~~i~  324 (373)
T 2mad_H          253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--------GHDVDAIS  324 (373)
T ss_pred             eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--------CCCcCeEE
Confidence            10          1223445789999998887653          35799999999888877763        33467899


Q ss_pred             EcCCCc-eEEEec-cCCeEEEEecCCCC
Q psy15191        234 WSHDSR-YFLTIS-RDGVCVVWGLGEPP  259 (312)
Q Consensus       234 ~~~~~~-~l~s~~-~dg~i~iwd~~~~~  259 (312)
                      |+|||+ +++++. .++.|.++|+.+..
T Consensus       325 ~s~Dg~~~l~v~~~~~~~V~ViD~~t~~  352 (373)
T 2mad_H          325 VAQDGGPDLYALSAGTEVLHIYDAGAGD  352 (373)
T ss_pred             ECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence            999999 777777 58999999998874

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.40  E-value=1.3e-10  Score=103.08  Aligned_cols=222  Identities=11%  Similarity=0.039  Sum_probs=138.1

Q ss_pred             cccCcEEEEEEecCcCcCCCCceEE-----EecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCc--
Q psy15191         45 NHKSKVMAVKWVLNTSLDPEHKDLV-----SCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKS--  110 (312)
Q Consensus        45 ~h~~~v~~~~~~~~~~~~~~~~~l~-----s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~--  110 (312)
                      +|...+..++|+|+      |++||     .|+.+..|++||+.+++...       .....++ ++..|+.++.+..  
T Consensus       126 ~~~~~l~~~~~SpD------g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~  198 (693)
T 3iuj_A          126 DGTTALDQLSFSRD------GRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDG  198 (693)
T ss_dssp             TSCCEEEEEEECTT------SSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred             CCcEEEEEEEECCC------CCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccc
Confidence            35567888999998      99888     34444689999999987532       1233456 7777888777643  


Q ss_pred             -----------EEEEcCCCCcceeeeeeeecccCC-CccceeEEEECCCCCeEEEeec----CCeEEE-ecccCc-eeee
Q psy15191        111 -----------IIVWAPDPTTGLWLETARVGEVGG-NTLGFYGCKFGPRGDYIIAHGF----QGSLHL-DVTTWK-QIQT  172 (312)
Q Consensus       111 -----------i~i~d~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----~~~i~~-d~~~~~-~~~~  172 (312)
                                 |++|++.+.........   .... +...+..+.|+|+|++|+....    ...+.+ |+.+.+ ....
T Consensus       199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~  275 (693)
T 3iuj_A          199 SELSARTDQHKVYFHRLGTAQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT  275 (693)
T ss_dssp             ------CCCCEEEEEETTSCGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred             ccccccCCCcEEEEEECCCCcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence                       89999887543211111   1112 3344678899999998865443    246777 765543 2233


Q ss_pred             ecccCCceeEEEECCCCCEEEEEe-cC---CeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        173 LPCHQLTITQLAFSPDDTHLVSVS-RD---RRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~~l~~~~-~d---~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      +..+....... +++++..|+..+ .+   +.|..+|+.+...  ...+..       +...+.  .|++++++|+....
T Consensus       276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-------~~~~~~--~~s~~g~~lv~~~~  345 (693)
T 3iuj_A          276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-------ERQQVL--TVHSGSGYLFAEYM  345 (693)
T ss_dssp             EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-------CCSSCE--EEEEETTEEEEEEE
T ss_pred             EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-------CCCCEE--EEEEECCEEEEEEE
Confidence            44454544444 566666555444 33   6799999987654  233332       323333  78899988877664


Q ss_pred             -CC--eEEEEecCCCCCCcccccccccceeEEee-ccCcceeEEEeccCCCeEEEEe
Q psy15191        247 -DG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       247 -dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                       ++  .|++|++...             ....+. ...+.+..+.++++++.|+...
T Consensus       346 ~~g~~~l~~~d~~g~-------------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~  389 (693)
T 3iuj_A          346 VDATARVEQFDYEGK-------------RVREVALPGLGSVSGFNGKHDDPALYFGF  389 (693)
T ss_dssp             ETTEEEEEEECTTSC-------------EEEEECCSSSSEEEECCCCTTCSCEEEEE
T ss_pred             ECCeeEEEEEECCCC-------------eeEEeecCCCceEEeeecCCCCCEEEEEe
Confidence             44  6888887643             233332 2345677788888887666553

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.40  E-value=1.5e-09  Score=86.72  Aligned_cols=205  Identities=10%  Similarity=0.010  Sum_probs=127.4

Q ss_pred             EEeCCCCceEEEEc----cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc-------------ccc
Q psy15191         31 KWNGEGGKVLYTLT----NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP-------------YHM   93 (312)
Q Consensus        31 ~w~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~-------------~~~   93 (312)
                      .|++.+++......    ++...+.++++.++     +++++++.. .+.|.+||.+ ++....             ..+
T Consensus        50 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~-----~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i  122 (314)
T 1pjx_A           50 RIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD-----ANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDC  122 (314)
T ss_dssp             EECTTTCCEEEEECCEETTEECCEEEEEECSS-----SSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEE
T ss_pred             EEeCCCCcEEEEEecccCCCCCCCceEEEecC-----CCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCE
Confidence            37777776543322    25567889988775     134444443 4478889876 443211             122


Q ss_pred             cCCCCCceEEEEeCC---------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC----CCCCeEEEe
Q psy15191         94 RDDSKQLHLLSCSMD---------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG----PRGDYIIAH  154 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~  154 (312)
                      ...+++.++++...+               +.|..++.. ++....  .      ........++++    |+++.++++
T Consensus       123 ~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~--~------~~~~~~~~i~~~~~~d~dg~~l~v~  193 (314)
T 1pjx_A          123 AFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV--D------TAFQFPNGIAVRHMNDGRPYQLIVA  193 (314)
T ss_dssp             EECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE--E------EEESSEEEEEEEECTTSCEEEEEEE
T ss_pred             EECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe--c------cCCCCcceEEEecccCCCCCEEEEE
Confidence            234566666665544               456667654 221111  1      112345788999    999766555


Q ss_pred             -ecCCeEEE-ecc-cCce-----eeeecccC-CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        155 -GFQGSLHL-DVT-TWKQ-----IQTLPCHQ-LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       155 -~~~~~i~~-d~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                       ..++.|.+ +.. +...     ...+..+. ..+..++++++|+++++...++.|.+||..+.+....+..       +
T Consensus       194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~-------~  266 (314)
T 1pjx_A          194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-------P  266 (314)
T ss_dssp             ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-------S
T ss_pred             ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-------C
Confidence             45677777 544 2221     11222333 5678899999999888877889999999885555544443       3


Q ss_pred             ceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCC
Q psy15191        226 KRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       226 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~  258 (312)
                      ...+.+++++|+++ ++++...++.|..|++...
T Consensus       267 ~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          267 FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            35688999999999 4555566789999998654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.39  E-value=4.3e-10  Score=91.18  Aligned_cols=229  Identities=10%  Similarity=0.011  Sum_probs=144.8

Q ss_pred             EeCCCCceEEEEcccc-------CcEEEEEEecCcCcCCCCceEEEecC--CCcEEEeeecCCccccccccc-----CCC
Q psy15191         32 WNGEGGKVLYTLTNHK-------SKVMAVKWVLNTSLDPEHKDLVSCSL--DKTAILWKYVSEGNYLPYHMR-----DDS   97 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~~~~l~s~~~--dg~i~vw~~~~~~~~~~~~~~-----~~~   97 (312)
                      ||+.+++.+.++.-..       .....++|+|+      |++++.+..  ++.|.++|+.+.+.....-.+     ...
T Consensus       114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD------Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~  187 (386)
T 3sjl_D          114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD------GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT  187 (386)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT------SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred             EECCCCeEEEEEECCCccccccCCCCceEEEcCC------CCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecC
Confidence            6777777777664221       23456778887      998877753  689999999998864332211     122


Q ss_pred             CCceEEEEeCCCcEEEEcCCC-CcceeeeeeeecccCCCcccee-EEEEC-CCCCeEEEeecCCeEEE-ecccCc--eee
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDP-TTGLWLETARVGEVGGNTLGFY-GCKFG-PRGDYIIAHGFQGSLHL-DVTTWK--QIQ  171 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~l~~~~~~~~i~~-d~~~~~--~~~  171 (312)
                      ....+++.+.||.+.+.++.+ ++..  .... ..+.....++. ...|. ++|++++ .+.+|.+.+ |..+..  ...
T Consensus       188 g~~~~~~~~~DG~~~~v~~~~~g~v~--~~~~-~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~  263 (386)
T 3sjl_D          188 APDTFFMHCRDGSLAKVAFGTEGTPE--ITHT-EVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLP  263 (386)
T ss_dssp             ETTEEEEEETTSCEEEEECCSSSCCE--EEEC-CCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECC
T ss_pred             CCceeEEECCCCCEEEEECCCCCeEE--Eeec-ceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeec
Confidence            334677888999999999876 3321  1111 11111112222 23553 6776555 555788888 775543  222


Q ss_pred             eec----------ccCCceeEEEECCCCCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEE
Q psy15191        172 TLP----------CHQLTITQLAFSPDDTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG  231 (312)
Q Consensus       172 ~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~  231 (312)
                      ...          -.......++++|+++.++....          .+.|.+.|+.+.+.+..+.        -...+.+
T Consensus       264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~--------vg~~~~~  335 (386)
T 3sjl_D          264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--------MGHEIDS  335 (386)
T ss_dssp             CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--------EEEEECE
T ss_pred             ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE--------CCCCcce
Confidence            221          01233445788999998887653          2579999999999988887        3456889


Q ss_pred             EEEcCCCc-eEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        232 VAWSHDSR-YFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       232 ~~~~~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ++++||++ +|+++ ..++.|.++|..++.            .+.++..- +..+.|.+++|
T Consensus       336 lavs~D~~~~ly~tn~~~~~VsViD~~t~k------------~~~~i~~~-~~p~~l~~s~d  384 (386)
T 3sjl_D          336 INVSQDEKPLLYALSTGDKTLYIHDAESGE------------ELRSVNQL-GHGPQVITTAD  384 (386)
T ss_dssp             EEECSSSSCEEEEEETTTTEEEEEETTTCC------------EEEEECCC-CSSCCEEEECC
T ss_pred             EEECCCCCeEEEEEcCCCCeEEEEECCCCc------------EEEEecCC-CCCceeEECCc
Confidence            99999997 66654 568999999998874            45555432 33355666665

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.37  E-value=1.5e-09  Score=89.52  Aligned_cols=228  Identities=11%  Similarity=0.046  Sum_probs=146.0

Q ss_pred             CCCeEEEEeccCC----CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcE
Q psy15191         12 EGGKVLYTLTNHK----SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTA   77 (312)
Q Consensus        12 ~~~~~~~~~~~h~----~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i   77 (312)
                      ..++.++......    +.|  ..+|+.+++.+.++..-..+  .+.++|+      +++|+.+.          .++.|
T Consensus        82 ~~~~~vyV~n~~~~~~~~~V--sVID~~t~~vv~~I~vG~~P--gia~SpD------gk~lyVan~~~~~~~~G~~~~~V  151 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQ--FVIDGSTGRILGMTDGGFLP--HPVAAED------GSFFAQASTVFERIARGKRTDYV  151 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEE--EEEETTTTEEEEEEEECSSC--EEEECTT------SSCEEEEEEEEEETTEEEEEEEE
T ss_pred             CCCCEEEEECCCcCCCCCeE--EEEECCCCEEEEEEECCCCC--ceEECCC------CCEEEEEeccccccccCCCCCEE
Confidence            3456666665432    233  23789999999999865555  8999998      88877765          46789


Q ss_pred             EEeeecCCccccc---------------ccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeeccc----C-C-
Q psy15191         78 ILWKYVSEGNYLP---------------YHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEV----G-G-  134 (312)
Q Consensus        78 ~vw~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~----~-~-  134 (312)
                      .++|..+.+....               .....++++.+++++..  ++.|.+.|+.+.+.  +..++....    + + 
T Consensus       152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv--v~~I~v~g~~~~~p~g~  229 (426)
T 3c75_H          152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF--DRMLDVPDCYHIFPASP  229 (426)
T ss_dssp             EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEECCSEEEEEEEET
T ss_pred             EEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE--EEEEEcCCceeeccCCC
Confidence            9999988776321               22345788888888764  57899999998543  222322100    0 0 


Q ss_pred             -----------------Cccce----------------eEEEECCCCCeEEEeecCCeEEE-ecccCcee--eeec----
Q psy15191        135 -----------------NTLGF----------------YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI--QTLP----  174 (312)
Q Consensus       135 -----------------~~~~v----------------~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~--~~~~----  174 (312)
                                       ....+                ..+.+.+++..++.....+.+.+ |.......  ..+.    
T Consensus       230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~  309 (426)
T 3c75_H          230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE  309 (426)
T ss_dssp             TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred             cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence                             00000                01234555555555555566665 54322211  1100    


Q ss_pred             ------ccCCceeEEEECCCCCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        175 ------CHQLTITQLAFSPDDTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       175 ------~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                            ........++++|+++++++...          ++.|.+.|+.+.+.+..+..        ......++|+||+
T Consensus       310 ~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--------g~~P~gia~spDg  381 (426)
T 3c75_H          310 AERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--------GHEIDSINVSQDA  381 (426)
T ss_dssp             TTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--------EEEECEEEECCSS
T ss_pred             cccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--------CCCcCeEEEccCC
Confidence                  01112223789999888777643          35799999999999888873        3457889999999


Q ss_pred             c-eEEEec-cCCeEEEEecCCCC
Q psy15191        239 R-YFLTIS-RDGVCVVWGLGEPP  259 (312)
Q Consensus       239 ~-~l~s~~-~dg~i~iwd~~~~~  259 (312)
                      + +++++. .++.|.++|+.+..
T Consensus       382 ~~~lyv~n~~s~~VsVID~~t~k  404 (426)
T 3c75_H          382 EPLLYALSAGTQTLHIYDAATGE  404 (426)
T ss_dssp             SCEEEEEETTTTEEEEEETTTCC
T ss_pred             CEEEEEEcCCCCeEEEEECCCCC
Confidence            9 888777 58999999998874

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.35  E-value=2.2e-09  Score=87.10  Aligned_cols=263  Identities=15%  Similarity=0.065  Sum_probs=152.5

Q ss_pred             CCCCeEEEEeccC----CCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCc
Q psy15191         11 GEGGKVLYTLTNH----KSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKT   76 (312)
Q Consensus        11 ~~~~~~~~~~~~h----~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~   76 (312)
                      ...++.++.....    .+.|  ...|..+++.+.++.....+ . ++++|+      |++++.+.          .++.
T Consensus        41 ~pd~~~vyV~~~~~~~~~~~V--~ViD~~t~~v~~~I~vG~~P-~-va~spD------G~~lyVan~~~~r~~~G~~~~~  110 (386)
T 3sjl_D           41 APDARRVYVNDPAHFAAVTQQ--FVIDGEAGRVIGMIDGGFLP-N-PVVADD------GSFIAHASTVFSRIARGERTDY  110 (386)
T ss_dssp             CCCTTEEEEEECGGGCSSEEE--EEEETTTTEEEEEEEECSSC-E-EEECTT------SSCEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCCEEEEEcCcccCCCCEE--EEEECCCCeEEEEEECCCCC-c-EEECCC------CCEEEEEcccccccccCCCCCE
Confidence            3456667666542    3334  23689999999999865555 4 999999      88887665          3678


Q ss_pred             EEEeeecCCcccc---------------cccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191         77 AILWKYVSEGNYL---------------PYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEVGGNTLGF  139 (312)
Q Consensus        77 i~vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v  139 (312)
                      |.+||..+.+...               ......++++.+++++..  ++.|.++|+.+.+  .+.+++..   +.    
T Consensus       111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~--vv~tI~v~---g~----  181 (386)
T 3sjl_D          111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA--FKRMLDVP---DC----  181 (386)
T ss_dssp             EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE--EEEEEECC---SE----
T ss_pred             EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc--EEEEEECC---Cc----
Confidence            9999999887632               222445788888887764  6889999999844  33333321   10    


Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-eccc-Cceeeeec----ccCCce-eEEEEC-CCCCEEEEEecCCeEEEEEccCCCe
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQTLP----CHQLTI-TQLAFS-PDDTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~~~~----~~~~~v-~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                       ...+....+.+++.+.||.+.+ ++.+ .+......    .-..++ ....|. ++|++++ .+.+|.+++.|+.+...
T Consensus       182 -~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~  259 (386)
T 3sjl_D          182 -YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA  259 (386)
T ss_dssp             -EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC
T ss_pred             -ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc
Confidence             1112112333444445555444 4433 33211111    111122 123553 6776555 55689999999976543


Q ss_pred             E--EEEeccCC---CCcccceeeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191        212 L--SLVACSDK---TNGVHKRIIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKL  276 (312)
Q Consensus       212 ~--~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  276 (312)
                      .  ..+.....   ...........++++|+++.++....          .+.|.++|+.+..            .+..+
T Consensus       260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k------------v~~~i  327 (386)
T 3sjl_D          260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE------------RLAKF  327 (386)
T ss_dssp             EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC------------EEEEE
T ss_pred             eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe------------EEEEE
Confidence            2  11110000   00001222334778999888777643          2479999998874            44444


Q ss_pred             eccCcceeEEEeccCCC-eEEEEecCCCcccceEEe
Q psy15191        277 YGHGYEIYSLAASHDGT-LLASACKATKPEHAAIII  311 (312)
Q Consensus       277 ~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~i  311 (312)
                      .. ...+.+|++++|++ +|.++.    ..++.|.+
T Consensus       328 ~v-g~~~~~lavs~D~~~~ly~tn----~~~~~VsV  358 (386)
T 3sjl_D          328 EM-GHEIDSINVSQDEKPLLYALS----TGDKTLYI  358 (386)
T ss_dssp             EE-EEEECEEEECSSSSCEEEEEE----TTTTEEEE
T ss_pred             EC-CCCcceEEECCCCCeEEEEEc----CCCCeEEE
Confidence            32 23688999999997 666553    33444654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.31  E-value=8.8e-09  Score=85.42  Aligned_cols=227  Identities=7%  Similarity=-0.010  Sum_probs=134.9

Q ss_pred             CCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCccc-
Q psy15191         12 EGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNY-   88 (312)
Q Consensus        12 ~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~-   88 (312)
                      ..++ ++........|  ..|++++++........ .... ++|+++      ++.|+.+..++  .|.+++...+... 
T Consensus       140 ~~g~-lyv~d~~~~~I--~~id~~~g~~~~~~~~~-~~~~-ia~~~~------g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          140 GNNT-VLAYQRDDPRV--RLISVDDNKVTTVHPGF-KGGK-PAVTKD------KQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             STTE-EEEEETTTTEE--EEEETTTTEEEEEEETC-CBCB-CEECTT------SSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             CCCC-EEEEecCCCcE--EEEECCCCEEEEeeccC-CCCc-eeEecC------CCcEEEEecCCCceEEEEEcCCCceeE
Confidence            4455 44443333444  23677766665555442 3333 888888      88888887766  6888887654331 


Q ss_pred             -----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc-cee-EEEECCC-CCeEEEe
Q psy15191         89 -----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL-GFY-GCKFGPR-GDYIIAH  154 (312)
Q Consensus        89 -----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~v~-~~~~~~~-~~~l~~~  154 (312)
                                 .+.....+++...|+.+..++.|+.||..+..........   ..+... ... .++|+|+ +.++++-
T Consensus       209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~---~~g~~~~~P~~~ia~~p~~g~lyv~d  285 (409)
T 3hrp_A          209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE---LSGSLGTNPGPYLIYYFVDSNFYMSD  285 (409)
T ss_dssp             EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC---CCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred             EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc---ccCCCCCCccccEEEeCCCCEEEEEe
Confidence                       1122233553345555777889999999875432221111   111111 123 8999995 5555555


Q ss_pred             ecCCeEEE-ecccCceeeeeccc---------------CCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEec
Q psy15191        155 GFQGSLHL-DVTTWKQIQTLPCH---------------QLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       155 ~~~~~i~~-d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      ..++.|+. +... .. ..+.++               -.....++++|+|+++++-. .++.|+.||+.++. +..+.+
T Consensus       286 ~~~~~I~~~~~~g-~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g  362 (409)
T 3hrp_A          286 QNLSSVYKITPDG-EC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAG  362 (409)
T ss_dssp             TTTTEEEEECTTC-CE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEE
T ss_pred             CCCCEEEEEecCC-CE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeC
Confidence            56677776 4332 11 112111               23478999999999777777 78999999976554 333333


Q ss_pred             c-CCCC-------cccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        218 S-DKTN-------GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       218 ~-~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      . ....       ...-.....++++|++.++++-..++.|+.+++
T Consensus       363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            2 0000       001245789999999988888888899988865

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.30  E-value=9.2e-10  Score=98.56  Aligned_cols=188  Identities=12%  Similarity=0.046  Sum_probs=116.0

Q ss_pred             cccCCCCCceEEEEeCC-----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe-------
Q psy15191         92 HMRDDSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-------  159 (312)
Q Consensus        92 ~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------  159 (312)
                      ...++|++.+|+.++.+     ..|++||+.+++....   ..     +...+..++|+|| +.|+.+..++.       
T Consensus       167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~---~~-----~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~  237 (741)
T 1yr2_A          167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD---EL-----KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ  237 (741)
T ss_dssp             EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE---EE-----EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred             eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc---cC-----CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence            34568899888876654     4699999998654221   10     1112357899999 98888776543       


Q ss_pred             -------EEE-ecccCce----eeeecccCCceeEEEECCCCCEEEEEecCC-----eEEEEEccCC--CeEEEEeccCC
Q psy15191        160 -------LHL-DVTTWKQ----IQTLPCHQLTITQLAFSPDDTHLVSVSRDR-----RWGLYKRQSS--GRLSLVACSDK  220 (312)
Q Consensus       160 -------i~~-d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~  220 (312)
                             |++ ++.+...    +.....+...+..+.|+|||++|+..+.++     .|++||+.++  .....+..   
T Consensus       238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~---  314 (741)
T 1yr2_A          238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP---  314 (741)
T ss_dssp             -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC---
T ss_pred             cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC---
Confidence                   555 5544332    111223334588999999999988877554     8999999876  31333332   


Q ss_pred             CCcccceeeEEEEEcCCCceEEEecc----CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEE
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISR----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLA  296 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  296 (312)
                          +...+... ++|+|+.|+..+.    ++.|.+||+..+. .       .  ....+..+...+.+++|+ ++.+++
T Consensus       315 ----~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~-------~--~~~l~~~~~~~l~~~~~~-~~~lv~  378 (741)
T 1yr2_A          315 ----DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-P-------R--FDTVVPESKDNLESVGIA-GNRLFA  378 (741)
T ss_dssp             ----SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-C-------E--EEEEECCCSSEEEEEEEE-BTEEEE
T ss_pred             ----CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-c-------c--cEEEecCCCCeEEEEEEE-CCEEEE
Confidence                22223333 3488888877665    3469999987642 0       0  122233445567778887 667778


Q ss_pred             EEecCCCcccceEEeC
Q psy15191        297 SACKATKPEHAAIIIW  312 (312)
Q Consensus       297 s~s~d~~~~dg~i~iW  312 (312)
                      +...|+     ..+||
T Consensus       379 ~~~~dg-----~~~l~  389 (741)
T 1yr2_A          379 SYIHDA-----KSQVL  389 (741)
T ss_dssp             EEEETT-----EEEEE
T ss_pred             EEEECC-----EEEEE
Confidence            885444     36654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.30  E-value=8.9e-09  Score=81.66  Aligned_cols=213  Identities=10%  Similarity=0.023  Sum_probs=130.2

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE   85 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~   85 (312)
                      ..+|+...+..+.. ......|  ..|++++++. ..+. ....+.++++.++      ++++++.  ++.|.+||..++
T Consensus        17 gp~w~~~~~~l~~~-d~~~~~i--~~~d~~~~~~-~~~~-~~~~~~~i~~~~d------G~l~v~~--~~~l~~~d~~~g   83 (297)
T 3g4e_A           17 SPVWEEVSNSLLFV-DIPAKKV--CRWDSFTKQV-QRVT-MDAPVSSVALRQS------GGYVATI--GTKFCALNWKEQ   83 (297)
T ss_dssp             EEEEETTTTEEEEE-ETTTTEE--EEEETTTCCE-EEEE-CSSCEEEEEEBTT------SSEEEEE--TTEEEEEETTTT
T ss_pred             CCeEECCCCEEEEE-ECCCCEE--EEEECCCCcE-EEEe-CCCceEEEEECCC------CCEEEEE--CCeEEEEECCCC
Confidence            45788766655543 3344555  3478877665 3333 4568999999988      8855553  567999998776


Q ss_pred             ccccc------------ccccCCCCCceEEEEeCC---------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191         86 GNYLP------------YHMRDDSKQLHLLSCSMD---------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF  144 (312)
Q Consensus        86 ~~~~~------------~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  144 (312)
                      +...+            ......+++.++++....         ..-.+|.+..... .....      ........++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~------~~~~~pngi~~  156 (297)
T 3g4e_A           84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF------DQVDISNGLDW  156 (297)
T ss_dssp             EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE------EEESBEEEEEE
T ss_pred             cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe------eccccccceEE
Confidence            54211            112235566554443221         2223443332111 11111      11234578999


Q ss_pred             CCCCCeEEEe-ecCCeEEE-ec--ccCcee-----eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191        145 GPRGDYIIAH-GFQGSLHL-DV--TTWKQI-----QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       145 ~~~~~~l~~~-~~~~~i~~-d~--~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  215 (312)
                      +|+++.|+.+ +.++.|.. +.  .+..+.     ..+..+......++++++|++.++...++.|..||..+++.+..+
T Consensus       157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i  236 (297)
T 3g4e_A          157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV  236 (297)
T ss_dssp             CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred             cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence            9999977554 45677776 54  444332     112233456789999999988887777889999999888877777


Q ss_pred             eccCCCCcccceeeEEEEEc-CCCceEEEec
Q psy15191        216 ACSDKTNGVHKRIIWGVAWS-HDSRYFLTIS  245 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~  245 (312)
                      ..       +...+++++|. |+++.|+.++
T Consensus       237 ~~-------p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          237 KL-------PVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             EC-------SSSBEEEEEEESGGGCEEEEEE
T ss_pred             EC-------CCCCceEEEEeCCCCCEEEEEc
Confidence            64       33568999998 8877665444

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.21  E-value=1.5e-08  Score=82.24  Aligned_cols=224  Identities=7%  Similarity=-0.079  Sum_probs=136.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEEeeecCCccccc-----------
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAILWKYVSEGNYLP-----------   90 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~vw~~~~~~~~~~-----------   90 (312)
                      .|+++++.+.++.....+  .+.++|+      +++++.+.          .++.|.+||..+.+....           
T Consensus        51 ID~~t~~v~~~i~vG~~P--~i~~spD------g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~  122 (368)
T 1mda_H           51 SCAGCGVTLGHSLGAFLS--LAVAGHS------GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV  122 (368)
T ss_dssp             EETTTTEEEEEEEECTTC--EEEECTT------SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred             EECCCCeEEEEEeCCCCC--ceEECCC------CCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccccc
Confidence            689999999999865566  7999998      88887775          478899999998876322           


Q ss_pred             ----ccccCCCCCceEEEEeC--CCcEEE--EcCCCCcceeeeeeeecc----cCC---------CccceeEEE------
Q psy15191         91 ----YHMRDDSKQLHLLSCSM--DKSIIV--WAPDPTTGLWLETARVGE----VGG---------NTLGFYGCK------  143 (312)
Q Consensus        91 ----~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~~~----~~~---------~~~~v~~~~------  143 (312)
                          .....++++.+++++..  +..+.+  +|..+     ....+...    .+.         ..+.+..+.      
T Consensus       123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~  197 (368)
T 1mda_H          123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPA  197 (368)
T ss_dssp             SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred             CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence                23345778888888764  456888  88865     11111100    000         000000000      


Q ss_pred             --------------------ECCCCCeEEEeecCCeEEE-ecccCc--eeeeec-------c---cCCceeEEEECCCCC
Q psy15191        144 --------------------FGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTLP-------C---HQLTITQLAFSPDDT  190 (312)
Q Consensus       144 --------------------~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~~-------~---~~~~v~~~~~~~~~~  190 (312)
                                          ..+++..++..+. +.+.+ |..+..  ....+.       .   .......++++||++
T Consensus       198 ~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~  276 (368)
T 1mda_H          198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD  276 (368)
T ss_dssp             CCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred             cCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence                                0233333333333 55555 553211  111111       0   011122278999999


Q ss_pred             EEEEEec-C--------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEec-cCCeEEEEecCCCC
Q psy15191        191 HLVSVSR-D--------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTIS-RDGVCVVWGLGEPP  259 (312)
Q Consensus       191 ~l~~~~~-d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~  259 (312)
                      .++.+.. +        +.+.++|+.+.+.+..+..        .....+++|+|||++ +++.. .++.|.++|+.+..
T Consensus       277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--------g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k  348 (368)
T 1mda_H          277 GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--------GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ  348 (368)
T ss_dssp             EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--------EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred             EEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--------CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence            8887643 2        3566999999988877663        335789999999984 55555 58999999998873


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEecc
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  290 (312)
                                  .+..+.... ....+++.+
T Consensus       349 ------------vv~~I~vg~-~P~~i~~~~  366 (368)
T 1mda_H          349 ------------DQSSVELDK-GPESLSVQN  366 (368)
T ss_dssp             ------------EEEECCCCS-CCCEEECCC
T ss_pred             ------------EEEEEECCC-CCCEEEeec
Confidence                        455555433 335566554

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.20  E-value=2.1e-08  Score=79.88  Aligned_cols=211  Identities=8%  Similarity=-0.015  Sum_probs=125.5

Q ss_pred             CceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC
Q psy15191          6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE   85 (312)
Q Consensus         6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~   85 (312)
                      ..+|+.+ |+.++......+.|.  .|++. ++ ...+..+...+..+++.++      |+++++...++.|.+|+.+ +
T Consensus        49 gp~~~~~-g~~l~~~d~~~~~i~--~~~~~-g~-~~~~~~~~~~~~gl~~d~d------G~l~v~~~~~~~v~~~~~~-g  116 (305)
T 3dr2_A           49 GPAWWEA-QRTLVWSDLVGRRVL--GWRED-GT-VDVLLDATAFTNGNAVDAQ------QRLVHCEHGRRAITRSDAD-G  116 (305)
T ss_dssp             EEEEEGG-GTEEEEEETTTTEEE--EEETT-SC-EEEEEESCSCEEEEEECTT------SCEEEEETTTTEEEEECTT-S
T ss_pred             CCeEeCC-CCEEEEEECCCCEEE--EEeCC-CC-EEEEeCCCCccceeeECCC------CCEEEEECCCCEEEEECCC-C
Confidence            3456654 333333333445553  35663 43 4455556678899999888      8877776666789999875 3


Q ss_pred             ccc------------ccccccCCCCCceEEE----EeC-------------CCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191         86 GNY------------LPYHMRDDSKQLHLLS----CSM-------------DKSIIVWAPDPTTGLWLETARVGEVGGNT  136 (312)
Q Consensus        86 ~~~------------~~~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~  136 (312)
                      ...            .+......+++.++++    +..             .+.|..+|..+++...+.         ..
T Consensus       117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---------~~  187 (305)
T 3dr2_A          117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---------DL  187 (305)
T ss_dssp             CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---------EE
T ss_pred             CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---------cC
Confidence            321            1112334566666665    322             245666776554322221         11


Q ss_pred             cceeEEEECCCCCeEEEeecC------CeEEE-ecccCceee--ee-cccCCceeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQ------GSLHL-DVTTWKQIQ--TL-PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKR  206 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~  206 (312)
                      .....++|+|+++.|+.+...      +.|.. ++....+..  .+ .........++++++|++. +++.+ .|.+|+.
T Consensus       188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~  265 (305)
T 3dr2_A          188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS  265 (305)
T ss_dssp             SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT
T ss_pred             CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC
Confidence            235789999999988777654      56766 544322111  11 1123445678999999944 44444 5999998


Q ss_pred             cCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        207 QSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      . ++.+..+..+       . .+..++|+|+++.|..++.++
T Consensus       266 ~-g~~~~~~~~~-------~-~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          266 D-GQLLGHIPTP-------G-TASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             T-SCEEEEEECS-------S-CCCEEEECTTSCEEEEEETTE
T ss_pred             C-CCEEEEEECC-------C-ceeEEEEeCCCCEEEEEcCCe
Confidence            4 5555555532       2 477899999998888777664

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.20  E-value=1e-10  Score=95.77  Aligned_cols=175  Identities=13%  Similarity=0.010  Sum_probs=93.6

Q ss_pred             CceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      +..+++++.||.|..||..+++..      .+...+...++..+++++.|+.|+.||..+++..+.......... ...+
T Consensus         9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~-~~sp   87 (369)
T 2hz6_A            9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV-QASP   87 (369)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH-TTCS
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc-ccCc
Confidence            568999999999999999888763      122233344555777788999999999988665443322211000 0011


Q ss_pred             eeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       139 v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      +    +. .+..+++++.++.++. |.++++.+..+..+.    ...++|++..+++++.|+.|+.||.++++....+..
T Consensus        88 ~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~  158 (369)
T 2hz6_A           88 C----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY  158 (369)
T ss_dssp             C----C------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred             e----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence            1    11 3456777888888887 888887776665332    234567888999999999999999998876544432


Q ss_pred             cCCCCcccceeeEEEEEcCCC---ceEEEeccCCeEEEEecCCC
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDS---RYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~  258 (312)
                      .         .....++.++.   ..++.++.||.|+.||..++
T Consensus       159 ~---------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG  193 (369)
T 2hz6_A          159 F---------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG  193 (369)
T ss_dssp             E---------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred             c---------cccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence            1         01123333332   45777889999999999887

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.18  E-value=1.1e-08  Score=84.41  Aligned_cols=228  Identities=12%  Similarity=0.042  Sum_probs=130.1

Q ss_pred             CCceEEEe-cCC----CcEEEeeecCCccc-------ccccccCCCCCceEEEEe----------CCCcEEEEcCCCCcc
Q psy15191         64 EHKDLVSC-SLD----KTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCS----------MDKSIIVWAPDPTTG  121 (312)
Q Consensus        64 ~~~~l~s~-~~d----g~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~  121 (312)
                      +++.++.. ..+    +.|.+.|..+.+..       .. ....++++..++++.          .++.|.++|..+.+ 
T Consensus        83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~-  160 (426)
T 3c75_H           83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL-  160 (426)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-
T ss_pred             CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc-
Confidence            35544444 333    79999999887762       23 455577888777775          46789999999854 


Q ss_pred             eeeeeeeecccCC--CccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCC-------ceeEEEE----
Q psy15191        122 LWLETARVGEVGG--NTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQL-------TITQLAF----  185 (312)
Q Consensus       122 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~-------~v~~~~~----  185 (312)
                       ....+.......  .......+.++|+|++++++..  ++.|.+ |..+.+.+..+.-...       .-.-+.+    
T Consensus       161 -vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG  239 (426)
T 3c75_H          161 -PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG  239 (426)
T ss_dssp             -EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred             -EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence             333333210000  1123567899999999998874  567877 9999988776652110       0001223    


Q ss_pred             ---------------------------------CCCCCEEEEEecCCeEEEEEccCCCeEEE--EeccCCCCcc---cce
Q psy15191        186 ---------------------------------SPDDTHLVSVSRDRRWGLYKRQSSGRLSL--VACSDKTNGV---HKR  227 (312)
Q Consensus       186 ---------------------------------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~---~~~  227 (312)
                                                       .+++..++..+..+.+.+.|+........  +.........   ...
T Consensus       240 ~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~  319 (426)
T 3c75_H          240 SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG  319 (426)
T ss_dssp             SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred             CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence                                             33333333333444455555543221110  0000000000   011


Q ss_pred             eeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEE
Q psy15191        228 IIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLA  296 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~  296 (312)
                      ....++++|+++.++....          ++.|.++|+.+..            .+..+... ....+++|+|||+ +++
T Consensus       320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k------------vv~~I~vg-~~P~gia~spDg~~~ly  386 (426)
T 3c75_H          320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE------------RINKIELG-HEIDSINVSQDAEPLLY  386 (426)
T ss_dssp             SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC------------EEEEEEEE-EEECEEEECCSSSCEEE
T ss_pred             CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe------------EEEEEECC-CCcCeEEEccCCCEEEE
Confidence            1223689999887666542          3579999998874            45555432 2578999999999 888


Q ss_pred             EEecCCCcccceEEe
Q psy15191        297 SACKATKPEHAAIII  311 (312)
Q Consensus       297 s~s~d~~~~dg~i~i  311 (312)
                      ++..    .++.|.+
T Consensus       387 v~n~----~s~~VsV  397 (426)
T 3c75_H          387 ALSA----GTQTLHI  397 (426)
T ss_dssp             EEET----TTTEEEE
T ss_pred             EEcC----CCCeEEE
Confidence            7752    2444655

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.15  E-value=4.3e-08  Score=80.32  Aligned_cols=261  Identities=11%  Similarity=0.066  Sum_probs=153.4

Q ss_pred             CCceEEEEEeCCC---CceEEEEcc--ccCcEEEEEEecC-----cCcC--CCCce-EEEecCCCcEEEeeecCC----c
Q psy15191         24 KSKVMAVKWNGEG---GKVLYTLTN--HKSKVMAVKWVLN-----TSLD--PEHKD-LVSCSLDKTAILWKYVSE----G   86 (312)
Q Consensus        24 ~~~v~~~~w~~~~---~~~~~~~~~--h~~~v~~~~~~~~-----~~~~--~~~~~-l~s~~~dg~i~vw~~~~~----~   86 (312)
                      .+.+..+.-++++   ++.+..+.-  -.++...+.|+.+     ..++  .+.++ ++++..+++|.+.|+.+.    +
T Consensus        42 ~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~  121 (462)
T 2ece_A           42 ADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPK  121 (462)
T ss_dssp             CCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCE
T ss_pred             CCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCce
Confidence            3445444444433   667766542  1234445555111     0122  33555 566778899999998754    1


Q ss_pred             ccccc---------------cccCCCCCceEEEEeCC------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         87 NYLPY---------------HMRDDSKQLHLLSCSMD------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        87 ~~~~~---------------~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      ...+.               .....+++ .++++..+      +.|.++|.++.+.  +.+.+..  .....-.+.+-|+
T Consensus       122 ~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v--~~~~~~~--~~~~~~~Yd~~~~  196 (462)
T 2ece_A          122 IIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP--LGKWEID--RGDQYLAYDFWWN  196 (462)
T ss_dssp             EEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE--EEECCSB--CTTCCCCCCEEEE
T ss_pred             eeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE--EEEEccC--CCCccccceEEEC
Confidence            11111               11235677 66666555      7899999988543  2232211  1122234568889


Q ss_pred             CCCCeEEEee-------------------cCCeEEE-ecccCceeeeeccc--CCceeEEEE--CCCCCEEEEEec----
Q psy15191        146 PRGDYIIAHG-------------------FQGSLHL-DVTTWKQIQTLPCH--QLTITQLAF--SPDDTHLVSVSR----  197 (312)
Q Consensus       146 ~~~~~l~~~~-------------------~~~~i~~-d~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~~~~~----  197 (312)
                      |+++.+++..                   ....|.+ |..+.+....+...  ......+.|  +|++++++++++    
T Consensus       197 p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~  276 (462)
T 2ece_A          197 LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK  276 (462)
T ss_dssp             TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT
T ss_pred             CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc
Confidence            9999888874                   3577888 88877777666532  123445555  999998887774    


Q ss_pred             --CCeEEEEEccCCCeEEEEe---ccCCCC---c----c----cceeeEEEEEcCCCceEEEecc-CCeEEEEecCCCCC
Q psy15191        198 --DRRWGLYKRQSSGRLSLVA---CSDKTN---G----V----HKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPT  260 (312)
Q Consensus       198 --d~~i~~wd~~~~~~~~~~~---~~~~~~---~----~----~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~  260 (312)
                        +++|.+|.... .......   ......   .    .    ....+..+.++|||++|..+.. .+.|.+||+.....
T Consensus       277 ~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~  355 (462)
T 2ece_A          277 DLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK  355 (462)
T ss_dssp             TCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS
T ss_pred             CCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence              56888877664 3222211   111000   0    0    0244778999999999887764 67999999974422


Q ss_pred             CcccccccccceeEEeecc--------------CcceeEEEeccCCCeEEEEe
Q psy15191        261 EEDLVQNTLWPEVQKLYGH--------------GYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ..         .+..+.-.              .+....++++|||++|.++.
T Consensus       356 ~~---------lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          356 PV---------LTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CE---------EEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             cE---------EEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            11         23333211              01358899999999999886

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.15  E-value=3e-07  Score=73.89  Aligned_cols=208  Identities=11%  Similarity=-0.039  Sum_probs=122.2

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG   86 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~   86 (312)
                      ..|++..+..+.. ......|  ..|++++++.. .+. ....+.+++|.++      ++++++. .+ .|.+||..+++
T Consensus        54 p~~~~~~~~l~~~-d~~~~~i--~~~d~~~~~~~-~~~-~~~~v~~i~~~~d------g~l~v~~-~~-gl~~~d~~~g~  120 (326)
T 2ghs_A           54 PTFDPASGTAWWF-NILEREL--HELHLASGRKT-VHA-LPFMGSALAKISD------SKQLIAS-DD-GLFLRDTATGV  120 (326)
T ss_dssp             EEEETTTTEEEEE-EGGGTEE--EEEETTTTEEE-EEE-CSSCEEEEEEEET------TEEEEEE-TT-EEEEEETTTCC
T ss_pred             CeEeCCCCEEEEE-ECCCCEE--EEEECCCCcEE-EEE-CCCcceEEEEeCC------CeEEEEE-CC-CEEEEECCCCc
Confidence            3566554444433 2223344  23667666543 333 3467999999998      8777765 34 48999987665


Q ss_pred             ccc------------cccccCCCCCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC
Q psy15191         87 NYL------------PYHMRDDSKQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG  148 (312)
Q Consensus        87 ~~~------------~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  148 (312)
                      ...            +.....++++.++++...      .+.|..++  +++  ... ..     ........++|+|++
T Consensus       121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~~~-~~-----~~~~~~~~i~~s~dg  190 (326)
T 2ghs_A          121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--VTK-LF-----ADISIPNSICFSPDG  190 (326)
T ss_dssp             EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--EEE-EE-----EEESSEEEEEECTTS
T ss_pred             EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--EEE-ee-----CCCcccCCeEEcCCC
Confidence            421            112223556655554432      23455555  222  111 11     112235789999999


Q ss_pred             CeEEEee-cCCeEEE-ecc--cC-cee-----eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        149 DYIIAHG-FQGSLHL-DVT--TW-KQI-----QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       149 ~~l~~~~-~~~~i~~-d~~--~~-~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      +.++.+. .++.|.+ +..  +. .+.     ..+.........++++++|++.++...++.|..||. +.+.+..+.. 
T Consensus       191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-  268 (326)
T 2ghs_A          191 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-  268 (326)
T ss_dssp             CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-
T ss_pred             CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-
Confidence            8776554 4567777 654  44 221     112223456788999999987777666789999998 4555555543 


Q ss_pred             CCCCcccceeeEEEEEc-CCCceEEEec
Q psy15191        219 DKTNGVHKRIIWGVAWS-HDSRYFLTIS  245 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~-~~~~~l~s~~  245 (312)
                            ....+++++|+ |+++.|+.++
T Consensus       269 ------~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          269 ------PGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             ------SCSBEEEEEEESTTSCEEEEEE
T ss_pred             ------CCCCcEEEEEecCCCCEEEEEe
Confidence                  34458899998 8877665443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.08  E-value=3.3e-08  Score=87.47  Aligned_cols=181  Identities=13%  Similarity=0.088  Sum_probs=111.4

Q ss_pred             CCCceEEEEeCCCc-------------------EEEEcCCCCcceeeeeeeecccCC--CccceeEEEECCCCC---eEE
Q psy15191         97 SKQLHLLSCSMDKS-------------------IIVWAPDPTTGLWLETARVGEVGG--NTLGFYGCKFGPRGD---YII  152 (312)
Q Consensus        97 ~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~---~l~  152 (312)
                      +...+++.+..++.                   |..+|.++++..+...........  ...++.......+|+   .++
T Consensus       244 ~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~  323 (689)
T 1yiq_A          244 PELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLM  323 (689)
T ss_dssp             TTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEE
T ss_pred             CCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEE
Confidence            34457777777653                   999999997766654432111000  111121122223554   688


Q ss_pred             EeecCCeEEE-ecccCceeeeecccC---------------------------------------CceeEEEECCCCCEE
Q psy15191        153 AHGFQGSLHL-DVTTWKQIQTLPCHQ---------------------------------------LTITQLAFSPDDTHL  192 (312)
Q Consensus       153 ~~~~~~~i~~-d~~~~~~~~~~~~~~---------------------------------------~~v~~~~~~~~~~~l  192 (312)
                      .++.+|.+++ |.++++++....-..                                       ..-..++++|+..++
T Consensus       324 ~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~  403 (689)
T 1yiq_A          324 QAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLV  403 (689)
T ss_dssp             ECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred             EECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEE
Confidence            8899999998 988888763221000                                       001237888888777


Q ss_pred             EEEec---------------------------------------------CCeEEEEEccCCCeEEEEeccCCCCcccce
Q psy15191        193 VSVSR---------------------------------------------DRRWGLYKRQSSGRLSLVACSDKTNGVHKR  227 (312)
Q Consensus       193 ~~~~~---------------------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~  227 (312)
                      ++...                                             +|.|+.||+.+++..-.....        .
T Consensus       404 yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--------~  475 (689)
T 1yiq_A          404 YIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV--------T  475 (689)
T ss_dssp             EEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES--------S
T ss_pred             EEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC--------C
Confidence            76532                                             377999999988877666532        2


Q ss_pred             eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC-cceeEEEeccCCCeEEE
Q psy15191        228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG-YEIYSLAASHDGTLLAS  297 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s  297 (312)
                      ++....+...+.+++.++.||.|+.||.+++.            .+.++.... ....-+.|..+|+.+++
T Consensus       476 ~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~------------~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          476 IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE------------KLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             SCCCCEEEETTTEEEEECTTSEEEEEETTTCC------------EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CccCccceECCCEEEEECCCCcEEEEECCCCc------------cceeeeCCCCcccCceEEEECCEEEEE
Confidence            22223455577889999999999999999984            444444332 22244677888874443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.07  E-value=4.5e-08  Score=86.60  Aligned_cols=179  Identities=10%  Similarity=0.121  Sum_probs=109.0

Q ss_pred             EEEeCCCCceEEEEccccCc----------E-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---c-----
Q psy15191         30 VKWNGEGGKVLYTLTNHKSK----------V-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---P-----   90 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---~-----   90 (312)
                      .++|..+|+.+.++..+...          + ..+.+  .      +..++.++.|+.|..+|..+++..-   .     
T Consensus        83 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~------~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~  154 (689)
T 1yiq_A           83 YALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--W------KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHK  154 (689)
T ss_dssp             EEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--E------TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTT
T ss_pred             EEEECCCCceeEEEcCCCCccccccccccCCCCccEE--E------CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCC
Confidence            34788899999888654321          0 01111  1      4578888889999999998887631   1     


Q ss_pred             --ccccCCC--CCceEEEEe------CCCcEEEEcCCCCcceeeeeeeecccC------------------------CCc
Q psy15191         91 --YHMRDDS--KQLHLLSCS------MDKSIIVWAPDPTTGLWLETARVGEVG------------------------GNT  136 (312)
Q Consensus        91 --~~~~~~~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~------------------------~~~  136 (312)
                        ......+  .+..++.+.      .++.|..||.++++..+..........                        +..
T Consensus       155 ~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~  234 (689)
T 1yiq_A          155 RSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGG  234 (689)
T ss_dssp             SCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEEC
T ss_pred             CCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCC
Confidence              0111122  122444443      368999999999876665432100000                        001


Q ss_pred             cceeEEEECCCCCeEEEeecCCe-------------------EEE-ecccCceeeeecc--cC-------CceeEEEECC
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGS-------------------LHL-DVTTWKQIQTLPC--HQ-------LTITQLAFSP  187 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~-------------------i~~-d~~~~~~~~~~~~--~~-------~~v~~~~~~~  187 (312)
                      .....++++|+...++.+..++.                   |.- |.++++.+-.++.  |.       ..+.-.....
T Consensus       235 ~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~  314 (689)
T 1yiq_A          235 TAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI  314 (689)
T ss_dssp             CCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred             ccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc
Confidence            11135788898888888887753                   444 9999888876652  21       1111122222


Q ss_pred             CCC---EEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        188 DDT---HLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       188 ~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      +|+   .++.++.+|.++++|.++++.+....
T Consensus       315 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~  346 (689)
T 1yiq_A          315 DGKPRKVLMQAPKNGFFYVIDRATGELLSAKG  346 (689)
T ss_dssp             TTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             CCcEEEEEEEECCCCeEEEEECCCCCEecccc
Confidence            554   78889999999999999988875443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.07  E-value=5.7e-08  Score=85.75  Aligned_cols=179  Identities=10%  Similarity=0.039  Sum_probs=110.8

Q ss_pred             EEEeCCCCceEEEEccccCc----------E-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccccc----
Q psy15191         30 VKWNGEGGKVLYTLTNHKSK----------V-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMR----   94 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~----   94 (312)
                      .++|..+|+.+.++......          + ..+.+  .      +..++.++.|+.|..+|..+++..-.....    
T Consensus        90 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~------~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~  161 (677)
T 1kb0_A           90 HAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--W------KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK  161 (677)
T ss_dssp             EEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--E------TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC
T ss_pred             EEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--E------CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcC
Confidence            34688899999888754221          0 11222  1      457888888999999999888763111110    


Q ss_pred             ------CCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeeccc----------------C---------CC
Q psy15191         95 ------DDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEV----------------G---------GN  135 (312)
Q Consensus        95 ------~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~----------------~---------~~  135 (312)
                            ..+  .+..++.++.      ++.|+.+|..+++..+.........                .         +.
T Consensus       162 ~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g  241 (677)
T 1kb0_A          162 GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGG  241 (677)
T ss_dssp             SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEE
T ss_pred             cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCC
Confidence                  011  2235555553      6899999999977665443221110                0         01


Q ss_pred             ccceeEEEECCCCCeEEEeecCC-------------------eEEE-ecccCceeeeecc--cC-------CceeEEEEC
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQG-------------------SLHL-DVTTWKQIQTLPC--HQ-------LTITQLAFS  186 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~-------------------~i~~-d~~~~~~~~~~~~--~~-------~~v~~~~~~  186 (312)
                      ......++++|++..++.+..++                   .|.. |.++++.+-.++.  |.       ....-+...
T Consensus       242 ~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~  321 (677)
T 1kb0_A          242 GTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIK  321 (677)
T ss_dssp             CCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEE
T ss_pred             cccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecc
Confidence            11123578889888888877664                   2444 8888888776552  21       112222333


Q ss_pred             CCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        187 PDD---THLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       187 ~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      .+|   ..++.++.+|.++++|..+++.+....
T Consensus       322 ~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~  354 (677)
T 1kb0_A          322 IAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN  354 (677)
T ss_dssp             ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             cCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence            367   678999999999999999998876655

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.07  E-value=4.5e-08  Score=86.43  Aligned_cols=168  Identities=16%  Similarity=0.103  Sum_probs=106.5

Q ss_pred             cEEEEcCCCCcceeeeeeeecccC--CCccceeEEEECCCC---CeEEEeecCCeEEE-ecccCceeeeecccC------
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVG--GNTLGFYGCKFGPRG---DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ------  177 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~---~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~------  177 (312)
                      .|..+|.++++..+.........-  .......-+....+|   ..++.++.+|.+++ |..+++++.......      
T Consensus       284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~  363 (677)
T 1kb0_A          284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG  363 (677)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence            499999999776665443211000  001122223333467   67888999999999 999888775543110      


Q ss_pred             ----C-ce------------------------eEEEECCCCCEEEEEecC------------------------------
Q psy15191        178 ----L-TI------------------------TQLAFSPDDTHLVSVSRD------------------------------  198 (312)
Q Consensus       178 ----~-~v------------------------~~~~~~~~~~~l~~~~~d------------------------------  198 (312)
                          + .+                        ..++++|+..++++...+                              
T Consensus       364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g  443 (677)
T 1kb0_A          364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA  443 (677)
T ss_dssp             ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred             cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence                0 01                        257889988888775432                              


Q ss_pred             -------------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        199 -------------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       199 -------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                                   |.|..||+.+++..-.+..        ..++....+...+.+++.++.||.+++||..++.      
T Consensus       444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--------~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~------  509 (677)
T 1kb0_A          444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH--------VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE------  509 (677)
T ss_dssp             EEECSSCCCSCCEEEEEEEETTTTEEEEEEEE--------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC------
T ss_pred             cccccccCCCCCccEEEEEeCCCCcEEeecCC--------CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc------
Confidence                         7799999998887766653        2223344566677888889999999999999884      


Q ss_pred             cccccceeEEeec-cCcceeEEEeccCCCeEEE
Q psy15191        266 QNTLWPEVQKLYG-HGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       266 ~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s  297 (312)
                            .+..+.. +.....-+.|.++|+.++.
T Consensus       510 ------~lw~~~~~~~~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          510 ------KLWEAPTGTGVVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             ------EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ------eeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence                  4444442 2223344667788875544

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.05  E-value=6.4e-08  Score=79.32  Aligned_cols=188  Identities=11%  Similarity=0.106  Sum_probs=119.4

Q ss_pred             CCCce-EEEEeCCCcEEEEcCCCCc--ceeeeeeeecccC--CCccceeEEEECCCCCeEEEeecC------CeEEE-ec
Q psy15191         97 SKQLH-LLSCSMDKSIIVWAPDPTT--GLWLETARVGEVG--GNTLGFYGCKFGPRGDYIIAHGFQ------GSLHL-DV  164 (312)
Q Consensus        97 ~~~~~-l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~  164 (312)
                      .+..+ ++.+..++.|.++|+.+..  ......+...++.  ........+...|+| .++++..+      +.+.+ |.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            44444 5567778899999997542  2333333111110  012245678889999 76666555      56666 99


Q ss_pred             ccCceeeeecccC---CceeEEEECCCCCEEEEEe-------------------cCCeEEEEEccCCCeEEEEeccCCCC
Q psy15191        165 TTWKQIQTLPCHQ---LTITQLAFSPDDTHLVSVS-------------------RDRRWGLYKRQSSGRLSLVACSDKTN  222 (312)
Q Consensus       165 ~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-------------------~d~~i~~wd~~~~~~~~~~~~~~~~~  222 (312)
                      ++.+++.......   .--..+-|+|+++.+++..                   .+.+|.+||+.+.+....+....   
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~---  248 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE---  248 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---
Confidence            9999988876221   2234688899999888874                   36899999999876666655421   


Q ss_pred             cccceeeEEEEE--cCCCceEEEecc------CCeEEEEecCCCCCCcccccccccceeEEe--ec--------------
Q psy15191        223 GVHKRIIWGVAW--SHDSRYFLTISR------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--YG--------------  278 (312)
Q Consensus       223 ~~~~~~v~~~~~--~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~--------------  278 (312)
                        .......+.|  +|++++++.+++      ++.|.+|....+.          |+..+.+  ..              
T Consensus       249 --~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~----------~~~~~vIdi~~~~v~~~lp~~~~~f  316 (462)
T 2ece_A          249 --ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK----------WNAEKVIEIPAEPLEGNLPEILKPF  316 (462)
T ss_dssp             --TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE----------EEEEEEEEECCEECCSSCCGGGGGG
T ss_pred             --CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc----------eeEEEEEeCCCcccccccccccccc
Confidence              1123344555  999998887774      5688887765421          1111111  00              


Q ss_pred             --cCcceeEEEeccCCCeEEEEec
Q psy15191        279 --HGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       279 --~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                        -......+.+||||++|.++..
T Consensus       317 ~~~~~~pa~I~lS~DGrfLYVSnr  340 (462)
T 2ece_A          317 KAVPPLVTDIDISLDDKFLYLSLW  340 (462)
T ss_dssp             TEECCCCCCEEECTTSCEEEEEET
T ss_pred             ccCCCceeEEEECCCCCEEEEEeC
Confidence              0245788999999999988764

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.04  E-value=3.6e-07  Score=70.25  Aligned_cols=204  Identities=11%  Similarity=0.064  Sum_probs=134.9

Q ss_pred             ceEEEEccccC--cEEEEEEecCcCcCCCCceEEEecC--CCcEEEeeecCCcccccccccCCC--------CCceEEEE
Q psy15191         38 KVLYTLTNHKS--KVMAVKWVLNTSLDPEHKDLVSCSL--DKTAILWKYVSEGNYLPYHMRDDS--------KQLHLLSC  105 (312)
Q Consensus        38 ~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~--dg~i~vw~~~~~~~~~~~~~~~~~--------~~~~l~~~  105 (312)
                      +.+.++. |..  ....+.|+++      +.++++.+.  ++.|.+.|+.+++..........+        .+...++.
T Consensus        10 ~vv~~~p-~~~~~f~~Gl~~~~d------g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t   82 (266)
T 2iwa_A           10 EVLNEFP-HDPYAFTQGLVYAEN------DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV   82 (266)
T ss_dssp             EEEEEEE-CCTTCCEEEEEECST------TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred             eEEEEEE-CCCCCCcccEEEeCC------CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE
Confidence            4556664 443  3689999887      666666553  579999999998874332221111        22344555


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccC-----Cc
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ-----LT  179 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~-----~~  179 (312)
                      -.++.+.++|..+.  ..+.+++..  .+     ....++++++.++++..++.+.+ |..+.+....+.-..     ..
T Consensus        83 ~~~~~v~viD~~t~--~v~~~i~~g--~~-----~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~  153 (266)
T 2iwa_A           83 WLKNIGFIYDRRTL--SNIKNFTHQ--MK-----DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIR  153 (266)
T ss_dssp             TTCSEEEEEETTTT--EEEEEEECC--SS-----SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred             ecCCEEEEEECCCC--cEEEEEECC--CC-----CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccc
Confidence            67889999999874  334444422  01     12335568888887777888888 999988887766211     23


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCc-eEEEeccCCeEEE
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSR-YFLTISRDGVCVV  252 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~i  252 (312)
                      ++.+.|. ++..++....++.|.+.|..+++....+......      ........+.++|+|+++ +++++...+.+.+
T Consensus       154 ~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~  232 (266)
T 2iwa_A          154 LNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE  232 (266)
T ss_dssp             EEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred             ceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence            6788887 7755555556789999999999988888753100      000123568999999986 5566667889999


Q ss_pred             EecCCC
Q psy15191        253 WGLGEP  258 (312)
Q Consensus       253 wd~~~~  258 (312)
                      .++...
T Consensus       233 i~l~~~  238 (266)
T 2iwa_A          233 IKLHLV  238 (266)
T ss_dssp             EEEEEC
T ss_pred             EEEecc
Confidence            888665

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.03  E-value=9.3e-08  Score=81.11  Aligned_cols=192  Identities=13%  Similarity=0.103  Sum_probs=117.8

Q ss_pred             CCceEEEEeC-CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE-C-CCCCeEEEee------------------c
Q psy15191         98 KQLHLLSCSM-DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF-G-PRGDYIIAHG------------------F  156 (312)
Q Consensus        98 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~  156 (312)
                      ++.+++.+.. ++.|.+.|+.+.+...+...+      ....+..+++ + |+++++++++                  .
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip------~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~  173 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP------NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY  173 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECS------SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC------CCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence            4555555554 556999999985433222222      2234678887 5 9999998885                  2


Q ss_pred             CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC------------------------------------
Q psy15191        157 QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR------------------------------------  199 (312)
Q Consensus       157 ~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------------------  199 (312)
                      ++.+.+ |..+.+......-. +....++++|+|+++++.+.+.                                    
T Consensus       174 ~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~  252 (595)
T 1fwx_A          174 VNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  252 (595)
T ss_dssp             EEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             CceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence            345555 88888887776622 2456788999999999888653                                    


Q ss_pred             --eEEEEEccC--CCe-EEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCC--cccccccccc
Q psy15191        200 --RWGLYKRQS--SGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTE--EDLVQNTLWP  271 (312)
Q Consensus       200 --~i~~wd~~~--~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~  271 (312)
                        .|.+.|.++  .+. ...+.        -.....++.++|||++++.++ .+..|.++|+.+....  ..+.  ....
T Consensus       253 i~~V~VID~~~~~~~~~~~~Ip--------vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~--~~~~  322 (595)
T 1fwx_A          253 LNGVKVVDGRKEASSLFTRYIP--------IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD--PRSA  322 (595)
T ss_dssp             ETTEEEEECSGGGCCSSEEEEE--------EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC--GGGG
T ss_pred             ECcEEEEeCcccCCceeEEEEe--------cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC--cccc
Confidence              255555554  222 22333        222355789999999877665 6789999999853100  0000  0000


Q ss_pred             eeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        272 EVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       272 ~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ....+. -......++|+|+|...++.     --|++|.+|
T Consensus       323 v~~~v~-vG~gP~h~aF~~dG~aY~t~-----~ldsqV~kw  357 (595)
T 1fwx_A          323 VVAEPE-LGLGPLHTAFDGRGNAYTSL-----FLDSQVVKW  357 (595)
T ss_dssp             EEECCB-CCSCEEEEEECTTSEEEEEE-----TTTTEEEEE
T ss_pred             eEEEcC-CCCCcceEEECCCCeEEEEE-----ecCCcEEEE
Confidence            222222 23457899999999555555     345558776

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.02  E-value=7.8e-07  Score=72.89  Aligned_cols=181  Identities=7%  Similarity=-0.007  Sum_probs=99.3

Q ss_pred             eEEEecCCCcEEEeeecCCccccccc-----------ccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191         67 DLVSCSLDKTAILWKYVSEGNYLPYH-----------MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN  135 (312)
Q Consensus        67 ~l~s~~~dg~i~vw~~~~~~~~~~~~-----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~  135 (312)
                      .++.++.++.|..+|..+++..-...           ......+..++.+..++.+..+|..+++..+............
T Consensus       145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~  224 (376)
T 3q7m_A          145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE  224 (376)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC------
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcc
Confidence            45556666777777766665410000           0000112356667777788888877765544333211000000


Q ss_pred             ccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE
Q psy15191        136 TLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL  212 (312)
Q Consensus       136 ~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  212 (312)
                      ...+..+...|  .+..+++++.++.+.. |.++.+.+-....  .....+..  ++..++.++.++.+..+|..+++..
T Consensus       225 ~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~  300 (376)
T 3q7m_A          225 IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTL  300 (376)
T ss_dssp             -----CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEE
T ss_pred             cccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEE
Confidence            00000000111  2456677777777766 8888777655442  22344444  3567888888999999999988876


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ........      ..+.....  .+..|+.++.+|.|+++|..++.
T Consensus       301 w~~~~~~~------~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~  339 (376)
T 3q7m_A          301 WTQSDLLH------RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR  339 (376)
T ss_dssp             EEECTTTT------SCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred             EeecccCC------CcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence            55442111      11111222  24578888889999999998873

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.01  E-value=1.5e-07  Score=76.18  Aligned_cols=233  Identities=10%  Similarity=0.073  Sum_probs=134.8

Q ss_pred             CCceEeCCCCeEEEEecc-CCC--ceEEEEEeCCCCceEEEE-------ccccCcEEEEEEecCcCcCCCCceEEEecC-
Q psy15191          5 PGDVVNGEGGKVLYTLTN-HKS--KVMAVKWNGEGGKVLYTL-------TNHKSKVMAVKWVLNTSLDPEHKDLVSCSL-   73 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~-h~~--~v~~~~w~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-   73 (312)
                      |..|.-..+|+.+.+... +.+  .|..+.    +++. ..+       .+|...+..+++.++      ++++++-.. 
T Consensus        19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~----~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~------g~L~v~D~g~   87 (343)
T 2qe8_A           19 PGNITLTPDGRLFLSLHQFYQPEMQVAELT----QDGL-IPFPPQSGNAIITFDTVLGIKSDGN------GIVWMLDNGN   87 (343)
T ss_dssp             EEEEEECTTSCEEEEECGGGCCSCSEEEEE----TTEE-EESCCCCSSCCCCCSCEEEEEECSS------SEEEEEECHH
T ss_pred             cceEEECCCCCEEEEeCCCCCCceEEEEEC----CCCe-ecCCCcccCcccceeEeeEEEEcCC------CcEEEEcCCC
Confidence            444555556776666432 222  454332    3433 222       235568999999988      776665443 


Q ss_pred             ----CCcEEEeeecCCcccccccc--------------cCCCC-CceEEEEe---CCCcEEEEcCCCCcceeeeee--ee
Q psy15191         74 ----DKTAILWKYVSEGNYLPYHM--------------RDDSK-QLHLLSCS---MDKSIIVWAPDPTTGLWLETA--RV  129 (312)
Q Consensus        74 ----dg~i~vw~~~~~~~~~~~~~--------------~~~~~-~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~--~~  129 (312)
                          ++.|.+||+.+++.......              ..+++ +..+++..   .++.|.+||+.+++.......  ..
T Consensus        88 ~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~  167 (343)
T 2qe8_A           88 QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI  167 (343)
T ss_dssp             HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred             CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence                57899999987764221111              11222 33345544   578899999876442221100  00


Q ss_pred             ------cccCC--------------CccceeEEEECCCCCeEEEeecCC-eEEE-eccc---Cce-----ee--eecccC
Q psy15191        130 ------GEVGG--------------NTLGFYGCKFGPRGDYIIAHGFQG-SLHL-DVTT---WKQ-----IQ--TLPCHQ  177 (312)
Q Consensus       130 ------~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~~~-~i~~-d~~~---~~~-----~~--~~~~~~  177 (312)
                            ....+              ....+..++++|+++.|+.+...+ .+.. +...   ..+     ..  ...++.
T Consensus       168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~  247 (343)
T 2qe8_A          168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK  247 (343)
T ss_dssp             SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC
T ss_pred             cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC
Confidence                  00000              012368899999999888877665 4433 3221   100     00  111234


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .....++++++|+++++...++.|.+||..+++.......+      ....+.+++|.++++++++.+..+.+.+|.
T Consensus       248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~------~~~~p~~va~~~~g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE------KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG------GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred             CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC------ceecCCeeEECCCCcEEEEeCccccccccc
Confidence            45678999999999999888999999998444332222211      234578999999999888877655554443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.00  E-value=2.1e-08  Score=84.97  Aligned_cols=219  Identities=10%  Similarity=0.059  Sum_probs=134.7

Q ss_pred             CCceEEEecC-CCcEEEeeecCCccccccccc----------CC-CCCceEEEEe------------------CCCcEEE
Q psy15191         64 EHKDLVSCSL-DKTAILWKYVSEGNYLPYHMR----------DD-SKQLHLLSCS------------------MDKSIIV  113 (312)
Q Consensus        64 ~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~~----------~~-~~~~~l~~~~------------------~d~~i~i  113 (312)
                      ||++++.+.. +.+|.+-|+.+.++..+.-.+          .. |++.++++++                  .++.+.+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            3777666554 567999999987753322221          13 6677777774                  3457888


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----------------------------------
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----------------------------------  158 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------------------------------  158 (312)
                      .|..+.  ....+....   +   ....++++|+|+++++.+.+.                                   
T Consensus       180 ID~~t~--~v~~qI~Vg---g---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~  251 (595)
T 1fwx_A          180 VDADKW--EVAWQVLVS---G---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ  251 (595)
T ss_dssp             EETTTT--EEEEEEEES---S---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred             EECCCC--eEEEEEEeC---C---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence            888873  333333321   1   235578999999998887553                                   


Q ss_pred             ---eEEE-eccc--Cce-eeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCe------------EEEEecc
Q psy15191        159 ---SLHL-DVTT--WKQ-IQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGR------------LSLVACS  218 (312)
Q Consensus       159 ---~i~~-d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~------------~~~~~~~  218 (312)
                         .+.+ |.++  ... ...+. -.....++.++|||+++++++ .+.+|.++|+.+.+.            ...+.  
T Consensus       252 ~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--  328 (595)
T 1fwx_A          252 ELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--  328 (595)
T ss_dssp             EETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--
T ss_pred             EECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--
Confidence               1333 5544  322 22222 123456789999999887765 578999999986421            11111  


Q ss_pred             CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcc-----eeEEEeccCCC
Q psy15191        219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE-----IYSLAASHDGT  293 (312)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~  293 (312)
                            .......++|+|+|...++.-.|+.|.+||+.....  .+...+..+.+.++..|-.+     -.++.++|||+
T Consensus       329 ------vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~--~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk  400 (595)
T 1fwx_A          329 ------LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIR--AYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND  400 (595)
T ss_dssp             ------CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHH--HHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred             ------CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhh--hhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence                  334577899999995555667899999999876210  00000112255566554332     23446789999


Q ss_pred             eEEEEecC
Q psy15191        294 LLASACKA  301 (312)
Q Consensus       294 ~l~s~s~d  301 (312)
                      +|+++..-
T Consensus       401 ~l~~~Nk~  408 (595)
T 1fwx_A          401 WLVCLSKF  408 (595)
T ss_dssp             EEEEEESC
T ss_pred             EEEEcCCC
Confidence            99998654

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.00  E-value=1.8e-09  Score=88.33  Aligned_cols=166  Identities=10%  Similarity=-0.049  Sum_probs=92.6

Q ss_pred             EEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCc
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQL  100 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~  100 (312)
                      .+||..+|+.+.++..  +.+.+..+..+      +..+++++.||.|+.||..+++..-         ....+.-..+.
T Consensus        22 ~a~d~~tG~~~W~~~~--~~~~s~p~~~~------g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~   93 (369)
T 2hz6_A           22 HAVSKRTGSIKWTLKE--DPVLQVPTHVE------EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDG   93 (369)
T ss_dssp             EEEETTTCCEEEEEEC--CCSCCCC-----------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC----
T ss_pred             EEEECCCCCEEEEecC--CCceecceEcC------CCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCC
Confidence            4589999999998876  45555444444      7788888999999999998776521         01111111344


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      .+++++.++.|+.||..+++..+.....       .    ...++|++..+++++.++.++. |.++++.+-.+..+  .
T Consensus        94 ~v~~g~~dg~v~a~D~~tG~~~w~~~~~-------~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~  160 (369)
T 2hz6_A           94 ILYMGKKQDIWYVIDLLTGEKQQTLSSA-------F----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--D  160 (369)
T ss_dssp             -CCCCEEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE--E
T ss_pred             EEEEEeCCCEEEEEECCCCcEEEEecCC-------C----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--c
Confidence            6788889999999999986654433211       1    1345668888999999999888 77777665544321  1


Q ss_pred             eeEEEECCCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        180 ITQLAFSPDD---THLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       180 v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      .....+.++.   ..+++++.||.++.||.++++.+....
T Consensus       161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~  200 (369)
T 2hz6_A          161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN  200 (369)
T ss_dssp             ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred             ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence            2223344332   457778899999999999888766554

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.93  E-value=4.3e-07  Score=69.07  Aligned_cols=190  Identities=11%  Similarity=0.134  Sum_probs=123.2

Q ss_pred             ceEEEEccccCc--EEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCcccccccccCC-------CCC-ceEEEE
Q psy15191         38 KVLYTLTNHKSK--VMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNYLPYHMRDD-------SKQ-LHLLSC  105 (312)
Q Consensus        38 ~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~~~~~~~~~-------~~~-~~l~~~  105 (312)
                      +.++++. |...  ...+.|+ +      +.++.+.+.+|  .|+++|+.+++.......+..       ..+ ...+..
T Consensus        32 ~vv~~~p-hd~~~ftqGL~~~-~------~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~lt  103 (262)
T 3nol_A           32 QIVHSYP-HDTKAFTEGFFYR-N------GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLT  103 (262)
T ss_dssp             EEEEEEE-CCTTCEEEEEEEE-T------TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred             EEEEEec-CCCCcccceEEEE-C------CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEE
Confidence            3456663 5433  4788887 6      67778888776  899999999887432222211       122 234445


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc--C---Cc
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH--Q---LT  179 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~--~---~~  179 (312)
                      -.++.+.+||..+.+  .+.+++..   +     ....+.++++.|+....++.+.+ |..+.+....+.-.  .   ..
T Consensus       104 w~~~~v~v~D~~t~~--~~~ti~~~---~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~  173 (262)
T 3nol_A          104 WKNGLGFVWNIRNLR--QVRSFNYD---G-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE  173 (262)
T ss_dssp             SSSSEEEEEETTTCC--EEEEEECS---S-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred             eeCCEEEEEECccCc--EEEEEECC---C-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence            568899999998844  33344321   1     11233356777777766778888 99999888876621  1   33


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-----cccceeeEEEEEcCCCceEEEecc
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-----GVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      ++.+.|. +|+.++..-.++.|.+.|.++++....+.......     .....-.+.+||+|+++.|+..+.
T Consensus       174 lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          174 LNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             EEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             cceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            5567776 77655555568899999999999888887642211     012345789999998876665553

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.93  E-value=1.1e-07  Score=84.52  Aligned_cols=179  Identities=11%  Similarity=0.056  Sum_probs=108.1

Q ss_pred             ccCCCCCceEEEE-----eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe--------
Q psy15191         93 MRDDSKQLHLLSC-----SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS--------  159 (312)
Q Consensus        93 ~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------  159 (312)
                      ..++|++.+++.+     +....|+++|+.+++.... ...       ......++|+ |++.|+.+..+..        
T Consensus       134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~-------~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~  204 (693)
T 3iuj_A          134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLK-------DVKFSGISWL-GNEGFFYSSYDKPDGSELSAR  204 (693)
T ss_dssp             EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEE-------EEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred             EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccC-------CceeccEEEe-CCCEEEEEEecCccccccccc
Confidence            3567888877743     2335799999998653221 111       1113467899 9999988877632        


Q ss_pred             -----EEE-ecccCce----eeeecc-cCCceeEEEECCCCCEEEEEec----CCeEEEEEccCCC-eEEEEeccCCCCc
Q psy15191        160 -----LHL-DVTTWKQ----IQTLPC-HQLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSG-RLSLVACSDKTNG  223 (312)
Q Consensus       160 -----i~~-d~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-~~~~~~~~~~~~~  223 (312)
                           |++ ++.+...    +..... |...+..+.|+|||++|+....    +..|+++|+.+.. ....+..      
T Consensus       205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~------  278 (693)
T 3iuj_A          205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG------  278 (693)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC------
T ss_pred             CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC------
Confidence                 666 4443322    222223 4445788999999998865432    2589999997653 3334433      


Q ss_pred             ccceeeEEEEEcCCCceE-EEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        224 VHKRIIWGVAWSHDSRYF-LTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l-~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                       +....... +++++..| +.+..+   +.|..+|+..+...          ....+..|...+.  .|+++++.|+...
T Consensus       279 -~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----------~~~~l~~~~~~~~--~~s~~g~~lv~~~  344 (693)
T 3iuj_A          279 -DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA----------HWRDLIPERQQVL--TVHSGSGYLFAEY  344 (693)
T ss_dssp             -SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG----------GCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred             -CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----------ccEEEecCCCCEE--EEEEECCEEEEEE
Confidence             22223333 55565544 444443   58999998875321          1234555655554  8999999888775


Q ss_pred             c
Q psy15191        300 K  300 (312)
Q Consensus       300 ~  300 (312)
                      .
T Consensus       345 ~  345 (693)
T 3iuj_A          345 M  345 (693)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.88  E-value=1.6e-06  Score=66.66  Aligned_cols=179  Identities=6%  Similarity=-0.050  Sum_probs=113.0

Q ss_pred             CCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceee
Q psy15191         96 DSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQ  171 (312)
Q Consensus        96 ~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~  171 (312)
                      ++++.++++.+.  ++.|.++|+.+++.  +......   . ......+++.  +..|+.+. .++.+.+ |..+.+.+.
T Consensus        29 ~~dg~Lyvstg~~~~s~v~~iD~~tg~v--~~~i~l~---~-~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~  100 (266)
T 2iwa_A           29 AENDTLFESTGLYGRSSVRQVALQTGKV--ENIHKMD---D-SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK  100 (266)
T ss_dssp             CSTTEEEEEECSTTTCEEEEEETTTCCE--EEEEECC---T-TCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred             eCCCeEEEECCCCCCCEEEEEECCCCCE--EEEEecC---C-CcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence            343434444443  57899999998553  3333321   1 1122345554  45555544 5677777 999999888


Q ss_pred             eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191        172 TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV  251 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~  251 (312)
                      .+......  ...+++||+.++++..++.|.++|..+.+....+.......  .-..++.+.|. +++..+....++.|.
T Consensus       101 ~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~--p~~~~nele~~-dg~lyvn~~~~~~V~  175 (266)
T 2iwa_A          101 NFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH--RVIRLNELEYI-NGEVWANIWQTDCIA  175 (266)
T ss_dssp             EEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred             EEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc--ccccceeEEEE-CCEEEEecCCCCeEE
Confidence            87632122  23455678878777778999999999988877776432100  11236678888 777666666788999


Q ss_pred             EEecCCCCCCcccccccccceeEEeecc-------------CcceeEEEeccCCCeEEEEe
Q psy15191        252 VWGLGEPPTEEDLVQNTLWPEVQKLYGH-------------GYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       252 iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~s~s  299 (312)
                      +.|..++.            .+..+.-.             ....+.++|+|+++.|..++
T Consensus       176 vID~~tg~------------V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg  224 (266)
T 2iwa_A          176 RISAKDGT------------LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG  224 (266)
T ss_dssp             EEETTTCC------------EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred             EEECCCCc------------EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence            99998874            33333311             13568999999987555554

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.87  E-value=1.2e-05  Score=62.45  Aligned_cols=212  Identities=11%  Similarity=0.021  Sum_probs=122.0

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------ccccCCCC-CceEEEEeCCCcEEEEcCCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------YHMRDDSK-QLHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------~~~~~~~~-~~~l~~~~~d~~i~i~d~~~  118 (312)
                      ..+..++|.++     ++.++++-...+.|..++........+        ..+...+. +..+++....+.|.+++++.
T Consensus        36 ~~~~gi~~d~~-----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g  110 (267)
T 1npe_A           36 KVIIGLAFDCV-----DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (267)
T ss_dssp             EEEEEEEEETT-----TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CcEEEEEEecC-----CCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence            45789999886     144556666678999999876543211        11122333 33444445567788888764


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec---CCeEEE-ecccCceeeee-cccCCceeEEEECCCCCEEE
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF---QGSLHL-DVTTWKQIQTL-PCHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~i~~-d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~  193 (312)
                      .....+   .    .........++++|++..|+.+..   .+.|.. +... .....+ .........++++|++..|+
T Consensus       111 ~~~~~~---~----~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~ly  182 (267)
T 1npe_A          111 TQRRVL---F----DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLC  182 (267)
T ss_dssp             CSCEEE---E----CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred             CCEEEE---E----ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEE
Confidence            321111   1    111235688999997666655553   356655 4432 222222 12234578899999876665


Q ss_pred             EE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccce
Q psy15191        194 SV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPE  272 (312)
Q Consensus       194 ~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  272 (312)
                      .+ ...+.|..+|............        ......++.. .+.++++....+.|.++|..++.            .
T Consensus       183 v~d~~~~~I~~~~~~g~~~~~~~~~--------~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~------------~  241 (267)
T 1npe_A          183 WVDAGTHRAECLNPAQPGRRKVLEG--------LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK------------E  241 (267)
T ss_dssp             EEETTTTEEEEEETTEEEEEEEEEC--------CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE------------E
T ss_pred             EEECCCCEEEEEecCCCceEEEecC--------CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC------------c
Confidence            54 4568899999875433333221        1123456654 45555555567899999987763            3


Q ss_pred             eEEeeccC-cceeEEEeccCCC
Q psy15191        273 VQKLYGHG-YEIYSLAASHDGT  293 (312)
Q Consensus       273 ~~~~~~~~-~~v~~~~~s~~~~  293 (312)
                      +..+.... .....+++.|++.
T Consensus       242 ~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          242 MDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             EEEECCSSCCCCCCEEEECSCC
T ss_pred             eEEEccccccccceeeecCccC
Confidence            44443322 2467888888764

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.86  E-value=6.3e-06  Score=67.48  Aligned_cols=207  Identities=6%  Similarity=-0.024  Sum_probs=121.7

Q ss_pred             EEEeCCCCceEEEEcccc---------CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccc
Q psy15191         30 VKWNGEGGKVLYTLTNHK---------SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHM   93 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~   93 (312)
                      .++|.++|+.+..+....         ..+.+.-. ..      +..++.++.++.|..+|..+++..-       +...
T Consensus        66 ~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~  138 (376)
T 3q7m_A           66 KALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VS------GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSR  138 (376)
T ss_dssp             EEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EE------TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred             EEEEccCCceeeeecCccccccccccCcccccCce-Ee------CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcC
Confidence            347888888887766421         22322211 12      3467778889999999998887521       1111


Q ss_pred             cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee
Q psy15191         94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT  172 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~  172 (312)
                      +. ..+..++.++.++.|..+|..+++..+.............  ......  .+..++++..++.+.. |..+.+.+-.
T Consensus       139 p~-~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~--~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~  213 (376)
T 3q7m_A          139 PV-VSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG--ESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ  213 (376)
T ss_dssp             CE-EETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC--CCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred             CE-EECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC--CCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence            11 1234788888999999999998766554433211100000  011111  1456777888887776 8888777655


Q ss_pred             ecccCC-------ceeEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        173 LPCHQL-------TITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       173 ~~~~~~-------~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      ......       .+..+.-.|  .+..++.++.++.+..+|..+++........         ....+..  ++..++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~---------~~~~~~~--~~~~l~~  282 (376)
T 3q7m_A          214 QRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG---------SVNDFIV--DGNRIYL  282 (376)
T ss_dssp             EECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC---------CEEEEEE--ETTEEEE
T ss_pred             EecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC---------CCCCceE--ECCEEEE
Confidence            442110       000011122  3456778888999999999988776544321         1223333  3556777


Q ss_pred             eccCCeEEEEecCCCC
Q psy15191        244 ISRDGVCVVWGLGEPP  259 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~~  259 (312)
                      ++.++.|..+|..++.
T Consensus       283 ~~~~g~l~~~d~~tG~  298 (376)
T 3q7m_A          283 VDQNDRVMALTIDGGV  298 (376)
T ss_dssp             EETTCCEEEEETTTCC
T ss_pred             EcCCCeEEEEECCCCc
Confidence            7788899999988773

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.85  E-value=9.7e-07  Score=67.19  Aligned_cols=188  Identities=10%  Similarity=0.057  Sum_probs=123.1

Q ss_pred             ceEEEEccccCc--EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCC-------C-CCceEEEEeC
Q psy15191         38 KVLYTLTNHKSK--VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD-------S-KQLHLLSCSM  107 (312)
Q Consensus        38 ~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~-------~-~~~~l~~~~~  107 (312)
                      +.+.++. |...  ...+.|+.       +.++.+.+.+|.|+++|+++++..... .+..       . .+...+....
T Consensus        44 ~Vv~~~p-hd~~~ftqGL~~~~-------~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~  114 (268)
T 3nok_A           44 HIIREYP-HATNAFTQGLVFHQ-------GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT  114 (268)
T ss_dssp             EEEEEEE-CCTTCCEEEEEEET-------TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS
T ss_pred             EEEEEEc-CCCccccceEEEEC-------CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc
Confidence            3455553 4333  46788863       578888899999999999998875443 3221       1 2234455567


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc--cC---Ccee
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC--HQ---LTIT  181 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~--~~---~~v~  181 (312)
                      ++.+.+||..+.+  .+.+++..   +.   -..++  ++++.|+.+..++.+.+ |..+.+....+.-  +.   ..++
T Consensus       115 ~~~v~V~D~~Tl~--~~~ti~~~---~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lN  184 (268)
T 3nok_A          115 EGLLFTWSGMPPQ--RERTTRYS---GE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELIN  184 (268)
T ss_dssp             SCEEEEEETTTTE--EEEEEECS---SC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred             CCEEEEEECCcCc--EEEEEeCC---Cc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccccc
Confidence            8899999998843  34444421   11   13344  56788887777888888 9999988887662  11   2456


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCceEEEec
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      .+.|. +|..++..-.+..|.+.|.++++.+..+......      ......-.+.+|++|+++.|+..+
T Consensus       185 eLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          185 ELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             EEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             ccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            77876 7765555556889999999999988887754110      011224578999999876555443

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.84  E-value=4.2e-06  Score=66.98  Aligned_cols=219  Identities=13%  Similarity=0.067  Sum_probs=123.8

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------------------cccccCCCCCc
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------------------PYHMRDDSKQL  100 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------------------~~~~~~~~~~~  100 (312)
                      ....+++|.++      ++++.++..++.|..|+..++....                           +..+...++..
T Consensus        19 ~~p~~i~~d~~------g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g   92 (322)
T 2fp8_A           19 YAPNSFTFDST------NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN   92 (322)
T ss_dssp             SCCCCEECCTT------CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred             CCceEEEEcCC------CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence            34566777776      7777788888889988876543211                           11112233122


Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeec-----------------CCeEEE
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGF-----------------QGSLHL  162 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-----------------~~~i~~  162 (312)
                      .|+.+...+.|..+|..+.....+....   .......+..+++.+ +|+..++-..                 ++.+..
T Consensus        93 ~l~v~d~~~~i~~~d~~~g~~~~~~~~~---~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~  169 (322)
T 2fp8_A           93 QLYIVDCYYHLSVVGSEGGHATQLATSV---DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK  169 (322)
T ss_dssp             EEEEEETTTEEEEECTTCEECEEEESEE---TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred             cEEEEECCCCEEEEeCCCCEEEEecccC---CCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence            4555544455778876643221111110   001123467899999 8987665432                 244554


Q ss_pred             -ecccCceeeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        163 -DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       163 -d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                       |..+.+...... .......++++|+++.|+.+ +.++.|..|++....  ....+..       ... ...+++.++|
T Consensus       170 ~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-------~~g-P~gi~~d~~G  240 (322)
T 2fp8_A          170 YDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-------IPN-PGNIKRNADG  240 (322)
T ss_dssp             EETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-------CSS-EEEEEECTTS
T ss_pred             EeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-------CCC-CCCeEECCCC
Confidence             665544332222 12345679999999866555 556899999987532  1222221       112 6679999999


Q ss_pred             ceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeecc----CcceeEEEeccCCCeEEEE
Q psy15191        239 RYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH----GYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       239 ~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~  298 (312)
                      ++.++...          .+.|..+|....             .+..+...    ...+..+++ .+++++++.
T Consensus       241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~G~-------------~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~  300 (322)
T 2fp8_A          241 HFWVSSSEELDGNMHGRVDPKGIKFDEFGN-------------ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGT  300 (322)
T ss_dssp             CEEEEEEEETTSSTTSCEEEEEEEECTTSC-------------EEEEEECCTTTTTSCCCEEEE-ETTEEEEEC
T ss_pred             CEEEEecCcccccccCCCccEEEEECCCCC-------------EEEEEECCCCCccccceEEEE-eCCEEEEee
Confidence            87776654          456777765321             33334332    234666766 466666665

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.83  E-value=1.2e-06  Score=70.32  Aligned_cols=201  Identities=15%  Similarity=0.057  Sum_probs=118.8

Q ss_pred             ceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      ..+..++.++.|..+|.. ++..-        .......+++ .+..++.++.|..+|.. ++..+...       ....
T Consensus       108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~-------~~~~  177 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRFK-------TNDA  177 (330)
T ss_dssp             TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEEEE-------CSSC
T ss_pred             CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEEe-------cCCC
Confidence            356677778888888877 44310        0111112233 57778888999999987 44332222       1223


Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .+.++...+++..++. + .+...+| .+.+...........+.++...+++. |..++.++.+..+|. +.+....+..
T Consensus       178 ~~~~~~~d~~g~l~v~-t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~  252 (330)
T 3hxj_A          178 ITSAASIGKDGTIYFG-S-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT  252 (330)
T ss_dssp             CCSCCEECTTCCEEEE-S-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred             ceeeeEEcCCCEEEEE-e-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC
Confidence            4566777777775554 4 5555557 55555555544456688888888875 555677888888874 3455444432


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  297 (312)
                      .       ...+..+...+++. |..++.+|.|..+|. ++.            .+..+......+.++...++|++++ 
T Consensus       253 ~-------~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~------------~~~~~~~~~~~~~~~~~d~~g~l~~-  310 (330)
T 3hxj_A          253 G-------KRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGT------------EKWNFETGSWIIATPVIDENGTIYF-  310 (330)
T ss_dssp             S-------SCCCSCCEECTTSC-EEEECTTCEEEEECT-TSC------------EEEEEECSSCCCSCCEECTTCCEEE-
T ss_pred             C-------CCccccceEcCCCe-EEEecCCCCEEEECC-CCc------------EEEEEEcCCccccceEEcCCCEEEE-
Confidence            1       11223345555554 556777888999985 331            2333333455677788878887554 


Q ss_pred             EecCCC
Q psy15191        298 ACKATK  303 (312)
Q Consensus       298 ~s~d~~  303 (312)
                      ++.+|.
T Consensus       311 gt~~G~  316 (330)
T 3hxj_A          311 GTRNGK  316 (330)
T ss_dssp             ECTTSC
T ss_pred             EcCCCe
Confidence            644433

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.82  E-value=2.5e-07  Score=75.06  Aligned_cols=75  Identities=11%  Similarity=0.008  Sum_probs=58.0

Q ss_pred             EEECCCCCeEEEeec----------CCeEEEecccCceeeeecccCCceeEEEECCCCCE-EEEEe-cCCeEEEEEccCC
Q psy15191        142 CKFGPRGDYIIAHGF----------QGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTH-LVSVS-RDRRWGLYKRQSS  209 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~----------~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~-~d~~i~~wd~~~~  209 (312)
                      ++++|+++.++++..          ++...+|..+.+.+..+... .....|+|+|||++ +++.. .++.|.++|+.+.
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~  347 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD  347 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence            689999998887543          24443499999988887633 36889999999984 55555 5899999999998


Q ss_pred             CeEEEEec
Q psy15191        210 GRLSLVAC  217 (312)
Q Consensus       210 ~~~~~~~~  217 (312)
                      +.+..+..
T Consensus       348 kvv~~I~v  355 (368)
T 1mda_H          348 QDQSSVEL  355 (368)
T ss_dssp             EEEEECCC
T ss_pred             cEEEEEEC
Confidence            88877763

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.81  E-value=5.8e-07  Score=68.37  Aligned_cols=188  Identities=12%  Similarity=0.114  Sum_probs=113.5

Q ss_pred             CceEEEEeCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeec
Q psy15191         99 QLHLLSCSMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLP  174 (312)
Q Consensus        99 ~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~  174 (312)
                      +.++.+.+.+|  .|+.+|+.+++..  ......      .........+++..|+... .++.+.+ |..+.+.+..+.
T Consensus        53 ~~LyestG~~g~S~v~~vD~~Tgkv~--~~~~l~------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~  124 (262)
T 3nol_A           53 GYFYESTGLNGRSSIRKVDIESGKTL--QQIELG------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN  124 (262)
T ss_dssp             TEEEEEEEETTEEEEEEECTTTCCEE--EEEECC------TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred             CEEEEECCCCCCceEEEEECCCCcEE--EEEecC------CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence            44666777665  8999999985533  333321      1222222333455555554 5677777 999999998887


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .. .  ....+++|++.|+.+..++.|.++|..+.+....+.......  .-..++.+.|. +|++.+..-.++.|.+.|
T Consensus       125 ~~-~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~--~~~~lNELe~~-~G~lyan~w~~~~I~vID  198 (262)
T 3nol_A          125 YD-G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE--ELPELNELEWV-DGEIFANVWQTNKIVRID  198 (262)
T ss_dssp             CS-S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred             CC-C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc--cccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence            32 2  223334577777777778889999999988887776532110  11234567776 787777666788999999


Q ss_pred             cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ..++..........+.+............+.+||+|+++.|...++
T Consensus       199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            9887532211110000000000011235689999998877766654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.78  E-value=2.2e-05  Score=62.31  Aligned_cols=230  Identities=10%  Similarity=-0.029  Sum_probs=125.1

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCC-
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDK-  109 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~-  109 (312)
                      .+.+..+... .....++|.++      ++++++-..++.|..+|.......      .+..+...+++.++++..... 
T Consensus        22 ~~~~~~~p~~-~~pegia~~~~------g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~   94 (306)
T 2p4o_A           22 AKIITSFPVN-TFLENLASAPD------GTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADS   94 (306)
T ss_dssp             EEEEEEECTT-CCEEEEEECTT------SCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred             ceEeEeCCCC-CCcceEEECCC------CCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCc
Confidence            3455555432 45778888887      777777667788888876543221      112223355665554443322 


Q ss_pred             -cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc--eeee-------e-cccC
Q psy15191        110 -SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQT-------L-PCHQ  177 (312)
Q Consensus       110 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~-------~-~~~~  177 (312)
                       .|..++..+++...+...     . .......++..+++..+++-..++.|.. |..+.+  ....       . ...-
T Consensus        95 ~~v~~~d~~~g~~~~~~~~-----~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~  168 (306)
T 2p4o_A           95 IPVVSLVKSDGTVETLLTL-----P-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF  168 (306)
T ss_dssp             CEEEEEECTTSCEEEEEEC-----T-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred             ceEEEEcCCCCeEEEEEeC-----C-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence             366666655432211111     1 1122344555555544444445777776 655321  1100       0 0111


Q ss_pred             CceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCe---EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        178 LTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGR---LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ...+.+  +|+++.|+.+ ...+.|..+|+.....   ...+.        .......++++++|+++++....+.|.++
T Consensus       169 ~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--------~~~~P~gi~vd~dG~l~va~~~~~~V~~~  238 (306)
T 2p4o_A          169 PAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--------EQTNIDDFAFDVEGNLYGATHIYNSVVRI  238 (306)
T ss_dssp             CSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--------ESCCCSSEEEBTTCCEEEECBTTCCEEEE
T ss_pred             CcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--------ccCCCCCeEECCCCCEEEEeCCCCeEEEE
Confidence            234455  7888766555 4568899999874211   11111        11234568999999988877778889999


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEec---cCCCeEEEEec
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS---HDGTLLASACK  300 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~s~  300 (312)
                      |.. +..          ..+..+.......++++|.   |+++.|..++.
T Consensus       239 ~~~-G~~----------~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~  277 (306)
T 2p4o_A          239 APD-RST----------TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  277 (306)
T ss_dssp             CTT-CCE----------EEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             CCC-CCE----------EEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence            864 210          0121222233567899998   88766665544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.77  E-value=5.4e-06  Score=62.50  Aligned_cols=189  Identities=8%  Similarity=0.041  Sum_probs=121.4

Q ss_pred             ceEEEEcccc--CcEEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCcccccccccCC-------C-CCceEEEE
Q psy15191         38 KVLYTLTNHK--SKVMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNYLPYHMRDD-------S-KQLHLLSC  105 (312)
Q Consensus        38 ~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~~~~~~~~~-------~-~~~~l~~~  105 (312)
                      +.+.++ .|.  .-...+.|+++       .++.+.+.+|  .|+.+|+.+++.......+..       . .+...+..
T Consensus        10 ~v~~~~-phd~~~ftqGL~~~~~-------~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt   81 (243)
T 3mbr_X           10 RVVKRY-PHDTTAFTEGLFYLRG-------HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT   81 (243)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEETT-------EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred             EEEEEc-CCCCccccccEEEECC-------EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE
Confidence            345566 354  33668888754       6677777754  899999999887433222211       1 22344556


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccC-----Cc
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ-----LT  179 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~-----~~  179 (312)
                      ..++.+.+||..+.  ..+.+++..   +   .-..++  +++..|+.+..++.+.+ |..+.+....+.-..     ..
T Consensus        82 w~~~~v~v~D~~tl--~~~~ti~~~---~---~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~  151 (243)
T 3mbr_X           82 WRNHEGFVYDLATL--TPRARFRYP---G---EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN  151 (243)
T ss_dssp             SSSSEEEEEETTTT--EEEEEEECS---S---CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred             eeCCEEEEEECCcC--cEEEEEeCC---C---CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence            67899999999884  334444421   1   123444  56777777667888888 999998887776221     34


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc------ccceeeEEEEEcCCCceEEEec
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG------VHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      ++.+.+. +|+.++..-.+..|.+.|.++++.+..+........      ....-.+.+|++|+++.|+..+
T Consensus       152 lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          152 LNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             ceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            5667775 676555555678999999999998888775422110      1234578999999876555444

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.74  E-value=3.5e-06  Score=64.14  Aligned_cols=186  Identities=10%  Similarity=0.006  Sum_probs=114.1

Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE-eecCCeEEE-ecccCceeeeeccc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      +.++.+.+.+|.|+++|+++++..... ..     . ..-...+++  +++.|+. .-.++.+.+ |..+.+.+..+...
T Consensus        65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-----~-~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~  135 (268)
T 3nok_A           65 GHFFESTGHQGTLRQLSLESAQPVWME-RL-----G-NIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS  135 (268)
T ss_dssp             TEEEEEETTTTEEEECCSSCSSCSEEE-EC-----T-TCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred             CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-----C-CcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence            457778888889999999986543322 11     1 111123444  3444444 445677777 99999999888732


Q ss_pred             CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                       ..-..++  +|++.|+.+..++.|.++|..+.+....+.......  .-..++.+.|. +|++.+..-.++.|.+.|..
T Consensus       136 -~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~--~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~  209 (268)
T 3nok_A          136 -GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ--PVELINELECA-NGVIYANIWHSSDVLEIDPA  209 (268)
T ss_dssp             -SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred             -CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc--ccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence             2223444  577888887778999999999988887776533111  11235677777 77777766678899999998


Q ss_pred             CCCCCcccccccccceeEE-eeccCcceeEEEeccCCCeEEEEe
Q psy15191        257 EPPTEEDLVQNTLWPEVQK-LYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ++.....+.-..+.+.... ........+.||++|+++.|...+
T Consensus       210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            8753221110000000000 001124578999999876555553

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.73  E-value=1.4e-06  Score=69.79  Aligned_cols=191  Identities=12%  Similarity=-0.004  Sum_probs=111.6

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC------CCCCceEEEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD------DSKQLHLLSC  105 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------~~~~~~l~~~  105 (312)
                      |+ .+++.+..+..+...+.++...++      +. |..++.+  |..+|. +++..-......      .-.+..+..+
T Consensus        45 ~d-~~g~~~~~~~~~~~~~~~~~~~~~------g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~  113 (330)
T 3hxj_A           45 IN-TDGSVKWFFKSGEIIECRPSIGKD------GT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVT  113 (330)
T ss_dssp             EC-TTSCEEESSCGGGEEEECCEETTT------TE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEE
T ss_pred             EC-CCCcEEEEEecCCCcccceEEecC------Cc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEE
Confidence            55 566666655544445566665544      54 5555544  777875 333211000000      0013467788


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      +.++.|..+|.. ++..+...       .....+.++...+++. ++.++.++.+.. |.. .+...........+.++.
T Consensus       114 t~~~~l~~~d~~-g~~~~~~~-------~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~  183 (330)
T 3hxj_A          114 SMDGHLYAINTD-GTEKWRFK-------TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS  183 (330)
T ss_dssp             CTTSEEEEECTT-SCEEEEEE-------CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred             ecCCEEEEEcCC-CCEEEEEc-------CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence            888999999987 44333222       1222355566777776 555666666666 666 555555554455677788


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      ..+++..++ ++  +.|..+| .+.+.......       ....+.++...++|.+.+ ++.++.|..+|.
T Consensus       184 ~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~-------~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~  242 (330)
T 3hxj_A          184 IGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYA-------GYWTVTRPAISEDGTIYV-TSLDGHLYAINP  242 (330)
T ss_dssp             ECTTCCEEE-ES--SSEEEEC-TTSCEEEEECC-------SSCCCSCCEECTTSCEEE-EETTTEEEEECT
T ss_pred             EcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEcc-------CCcceeceEECCCCeEEE-EcCCCeEEEECC
Confidence            878887554 44  8899999 55555544432       224466778888876544 556777888863

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.72  E-value=4.9e-06  Score=73.45  Aligned_cols=179  Identities=14%  Similarity=0.115  Sum_probs=108.1

Q ss_pred             EEEeCCCCceEEEEccccCcE-----------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc-------
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKV-----------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY-------   91 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v-----------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-------   91 (312)
                      .++|..+|+.+.++.......           ..+.+.        +..++.++.|+.|..+|..+++..-..       
T Consensus        79 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~  150 (668)
T 1kv9_A           79 IAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--------GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK  150 (668)
T ss_dssp             EEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--------BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS
T ss_pred             EEEECCCChhceEECCCCCccccccccccCCccceEEE--------CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC
Confidence            347888999988886432210           111221        346778888999999999888762110       


Q ss_pred             --cccCCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccC------------------------CCcc
Q psy15191         92 --HMRDDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVG------------------------GNTL  137 (312)
Q Consensus        92 --~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~------------------------~~~~  137 (312)
                        .....+  .+..++.+..      ++.|..+|.++++..+..........                        ....
T Consensus       151 ~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~  230 (668)
T 1kv9_A          151 PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGT  230 (668)
T ss_dssp             SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECC
T ss_pred             cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCc
Confidence              111111  1234555543      58899999999777665432110000                        0011


Q ss_pred             ceeEEEECCCCCeEEEeecCCe-------------------EEE-ecccCceeeeecc--cC-------CceeEEEECCC
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGS-------------------LHL-DVTTWKQIQTLPC--HQ-------LTITQLAFSPD  188 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~-------------------i~~-d~~~~~~~~~~~~--~~-------~~v~~~~~~~~  188 (312)
                      ....+++.|+...++.+..++.                   |.- |.++++.+-.++.  |.       .+.....+..+
T Consensus       231 ~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~  310 (668)
T 1kv9_A          231 VWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNID  310 (668)
T ss_dssp             CCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred             cccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccC
Confidence            1224688888888888876653                   444 8888888776652  21       22222222235


Q ss_pred             CC---EEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        189 DT---HLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       189 ~~---~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      |+   .++.++.+|.++++|..+++.+....
T Consensus       311 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~  341 (668)
T 1kv9_A          311 GKPRKVLMQAPKNGFFYVLDRTNGKLISAEK  341 (668)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             CcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence            65   68889999999999999988775443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.64  E-value=6.7e-06  Score=72.59  Aligned_cols=142  Identities=13%  Similarity=0.079  Sum_probs=86.0

Q ss_pred             cEEEEcCCCCcceeeeeeeecccCC--CccceeEEEECCCCC---eEEEeecCCeEEE-ecccCceeeeecccC------
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGG--NTLGFYGCKFGPRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ------  177 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~------  177 (312)
                      .|..+|.++++..+...........  ...++....+..+|+   .++.++.+|.+++ |..+++++.......      
T Consensus       271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~  350 (668)
T 1kv9_A          271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK  350 (668)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred             eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence            3899999997766655432110000  012222222233564   6888889999998 888888763322100      


Q ss_pred             ------C------------------------ceeEEEECCCCCEEEEEe-------------------------------
Q psy15191        178 ------L------------------------TITQLAFSPDDTHLVSVS-------------------------------  196 (312)
Q Consensus       178 ------~------------------------~v~~~~~~~~~~~l~~~~-------------------------------  196 (312)
                            .                        .-..++++|+...++...                               
T Consensus       351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  430 (668)
T 1kv9_A          351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD  430 (668)
T ss_dssp             ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred             cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence                  0                        011267777766655421                               


Q ss_pred             -----cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        197 -----RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       197 -----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                           .+|.|..||+.+++..-.....        .+.....+...+.+++.++.||.|+.||..++.
T Consensus       431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~--------~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~  490 (668)
T 1kv9_A          431 VPAAVVSGALLAWDPVKQKAAWKVPYP--------THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE  490 (668)
T ss_dssp             CCGGGCEEEEEEEETTTTEEEEEEEES--------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             CCCCCccceEEEEeCCCCcEEEEccCC--------CCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence                 2378999999988876655532        112223344467788889999999999998874

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.62  E-value=2.1e-05  Score=59.34  Aligned_cols=188  Identities=12%  Similarity=-0.007  Sum_probs=111.3

Q ss_pred             CceEEEEeCC--CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE-eecCCeEEE-ecccCceeeeec
Q psy15191         99 QLHLLSCSMD--KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQTLP  174 (312)
Q Consensus        99 ~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~  174 (312)
                      +.++.+.+.+  ..|+.+|+.+++..  ......   .. .--..+++  .+..|+. .-.++.+.+ |..+.+.+..+.
T Consensus        31 ~~LyestG~~g~S~v~~vD~~tgkv~--~~~~l~---~~-~fgeGi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~  102 (243)
T 3mbr_X           31 GHLYESTGETGRSSVRKVDLETGRIL--QRAEVP---PP-YFGAGIVA--WRDRLIQLTWRNHEGFVYDLATLTPRARFR  102 (243)
T ss_dssp             TEEEEEECCTTSCEEEEEETTTCCEE--EEEECC---TT-CCEEEEEE--ETTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred             CEEEEECCCCCCceEEEEECCCCCEE--EEEeCC---CC-cceeEEEE--eCCEEEEEEeeCCEEEEEECCcCcEEEEEe
Confidence            3355666665  48999999985533  333211   11 11122333  3444444 446777777 999999999887


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .. ..-..++  +++..|+.+..++.|.++|..+.+....+.......  .-..++.+.+. +|+.++..-.+..|.+.|
T Consensus       103 ~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~--~~~~lNeLe~~-~G~lyanvw~s~~I~vID  176 (243)
T 3mbr_X          103 YP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR--PLDNLNELEWV-NGELLANVWLTSRIARID  176 (243)
T ss_dssp             CS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTTTEEEEEC
T ss_pred             CC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc--ccccceeeEEe-CCEEEEEECCCCeEEEEE
Confidence            32 2223444  567777777778999999999988887776532111  11235667766 777776666788999999


Q ss_pred             cCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEEec
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ..++..........+.+..... .......+.+|++|+++.|...++
T Consensus       177 p~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          177 PASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             TTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             CCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            9888532221111000000000 011235789999998766665543

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.60  E-value=9.6e-05  Score=57.29  Aligned_cols=145  Identities=8%  Similarity=-0.062  Sum_probs=86.1

Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeeccc
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      +..+++-..++.|..+++.......   ..    ......+..+++++++..++.+. ..+.|.+ +.............
T Consensus        48 ~~ly~~d~~~~~I~~~~~~g~~~~~---~~----~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~  120 (267)
T 1npe_A           48 KVVYWTDISEPSIGRASLHGGEPTT---II----RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG  120 (267)
T ss_dssp             TEEEEEETTTTEEEEEESSSCCCEE---EE----CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred             CEEEEEECCCCEEEEEecCCCCcEE---EE----ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC
Confidence            3344555567789999887533211   11    11224578899999766655544 4567766 55432222222212


Q ss_pred             CCceeEEEECCCCCEEEEEec---CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEE
Q psy15191        177 QLTITQLAFSPDDTHLVSVSR---DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVV  252 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~i  252 (312)
                      ......++++|++..|+.+..   .+.|..+++...........       .......++++|++..| ++-...+.|.+
T Consensus       121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~-------~~~~P~gia~d~~~~~lyv~d~~~~~I~~  193 (267)
T 1npe_A          121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-------NLGLPNGLTFDAFSSQLCWVDAGTHRAEC  193 (267)
T ss_dssp             CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-------TCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC-------CCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence            245789999997665555543   46888888864433222211       22346789999987655 45556789999


Q ss_pred             EecCC
Q psy15191        253 WGLGE  257 (312)
Q Consensus       253 wd~~~  257 (312)
                      +|+..
T Consensus       194 ~~~~g  198 (267)
T 1npe_A          194 LNPAQ  198 (267)
T ss_dssp             EETTE
T ss_pred             EecCC
Confidence            99864

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.56  E-value=6.1e-06  Score=72.84  Aligned_cols=247  Identities=12%  Similarity=0.011  Sum_probs=127.7

Q ss_pred             EEEEeCCCCce--EEEEc-cccCcEEEEEEecCcCcCCCCceEEEecC-CCcEEEeeecCCcccccccc---------cC
Q psy15191         29 AVKWNGEGGKV--LYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNYLPYHM---------RD   95 (312)
Q Consensus        29 ~~~w~~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~---------~~   95 (312)
                      ...||+.+++-  +..+. .+.....++++..+      +++++.|+. +..+.+||..+.....+..+         ..
T Consensus       221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~------g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~  294 (656)
T 1k3i_A          221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN------GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT  294 (656)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTT------SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred             EEEEeCCCCcEEeCcccCCCCCCccccccCCCC------CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence            34588877642  22232 12223334566666      889999984 45799999887653211111         11


Q ss_pred             CCCCceEEEEe-CC-----CcEEEEcCCCCcceeeeee--eecccCCCccceeEEEECCCCCeEEEeecCCeEE------
Q psy15191         96 DSKQLHLLSCS-MD-----KSIIVWAPDPTTGLWLETA--RVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH------  161 (312)
Q Consensus        96 ~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~------  161 (312)
                      -+++..++.|+ .+     ..+.+||..+.+  +....  ....+.....   ...+..++..++.++.+|.+.      
T Consensus       295 ~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~--W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv~Gg~~g~~~~~~~~~  369 (656)
T 1k3i_A          295 MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVNPMLTADK---QGLYRSDNHAWLFGWKKGSVFQAGPST  369 (656)
T ss_dssp             CTTSCEEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSGGGCCCCT---TGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred             ecCCeEEEEeCcccCCcccccceEeCCCCCc--ceeCCCccccccccccc---cceeecCCceEEEECCCCcEEEecCcc
Confidence            23566777777 34     568899988743  32210  0011111110   012334566666666665543      


Q ss_pred             ---E-ecccCceeeeecccC---------CceeEEEEC-CCCCEEEEEecCC-----------eEEEEEccCCCeEEEEe
Q psy15191        162 ---L-DVTTWKQIQTLPCHQ---------LTITQLAFS-PDDTHLVSVSRDR-----------RWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       162 ---~-d~~~~~~~~~~~~~~---------~~v~~~~~~-~~~~~l~~~~~d~-----------~i~~wd~~~~~~~~~~~  216 (312)
                         . |..+..-......+.         ..-..+.|. .+++.++.|+.++           .+.+||..+..-.....
T Consensus       370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~  449 (656)
T 1k3i_A          370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS  449 (656)
T ss_dssp             EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT
T ss_pred             ceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc
Confidence               2 333222111111111         122334443 3677888887543           67788877655333220


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccC-----------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS  285 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  285 (312)
                      ....    ....-.+++..|++++++.|+.+           ..+.+||..+.          .|..+..+.........
T Consensus       450 ~~mp----~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~----------~W~~~~~~~~~R~~hs~  515 (656)
T 1k3i_A          450 NGLY----FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD----------TFYKQNPNSIVRVYHSI  515 (656)
T ss_dssp             TCCS----SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT----------EEEECCCCSSCCCTTEE
T ss_pred             CCCC----CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC----------ceeecCCCCCccccccH
Confidence            1110    11112345667899999999864           46888987653          23333322222222234


Q ss_pred             EEeccCCCeEEEEec
Q psy15191        286 LAASHDGTLLASACK  300 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~  300 (312)
                      ..+.|+|++++.||.
T Consensus       516 a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          516 SLLLPDGRVFNGGGG  530 (656)
T ss_dssp             EEECTTSCEEEEECC
T ss_pred             hhcCCCcEEEecCCC
Confidence            456799999999974

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.56  E-value=4.9e-05  Score=60.75  Aligned_cols=186  Identities=13%  Similarity=0.025  Sum_probs=104.1

Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec------------ccCCCccceeEEEECC-CCCeEEEeecCCeEE
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG------------EVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLH  161 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~  161 (312)
                      ..+++.+++++..++.|..|+..+.+..........            ........+..+++.+ +++++++....+..+
T Consensus        26 ~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~  105 (322)
T 2fp8_A           26 FDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSV  105 (322)
T ss_dssp             CCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred             EcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEE
Confidence            345666678888889999998876332111100000            0000113478899998 565444433444334


Q ss_pred             EecccCceeeee---cc-cCCceeEEEECC-CCCEEEEEec-----------------CCeEEEEEccCCCeEEEEeccC
Q psy15191        162 LDVTTWKQIQTL---PC-HQLTITQLAFSP-DDTHLVSVSR-----------------DRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       162 ~d~~~~~~~~~~---~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                      +|..+.......   .+ .......+++.+ +|+..++-..                 ++.|..+|..+.+......   
T Consensus       106 ~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~---  182 (322)
T 2fp8_A          106 VGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK---  182 (322)
T ss_dssp             ECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE---
T ss_pred             EeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc---
Confidence            465543322111   11 123468899999 9987766432                 3678888876544322222   


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                           .......++++|++++|+.+ ...+.|.+|++.......       .+.+..+   .+ ...+++.++|+++++.
T Consensus       183 -----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-------~~~~~~~---~g-P~gi~~d~~G~l~va~  246 (322)
T 2fp8_A          183 -----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-------AEVLVKI---PN-PGNIKRNADGHFWVSS  246 (322)
T ss_dssp             -----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-------EEEEEEC---SS-EEEEEECTTSCEEEEE
T ss_pred             -----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-------cceEEeC---CC-CCCeEECCCCCEEEEe
Confidence                 11234579999999865544 667899999987532110       0111111   22 6778899998877765


Q ss_pred             e
Q psy15191        299 C  299 (312)
Q Consensus       299 s  299 (312)
                      .
T Consensus       247 ~  247 (322)
T 2fp8_A          247 S  247 (322)
T ss_dssp             E
T ss_pred             c
Confidence            3

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.52  E-value=0.00052  Score=62.03  Aligned_cols=227  Identities=10%  Similarity=0.043  Sum_probs=127.7

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------cccccCCCCCceEEEEeCCCcE
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------PYHMRDDSKQLHLLSCSMDKSI  111 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~d~~i  111 (312)
                      ...|.++...++      +.+.+ |..++-+..||..+++...               +..+...+++ .+..|+.+ -|
T Consensus       214 ~~~i~~i~~d~~------g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigt~~-Gl  284 (795)
T 4a2l_A          214 TKQIQAILQQSP------TRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQN-RLWIGTFN-DL  284 (795)
T ss_dssp             CCCEEEEEEEET------TEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTS-CEEEEESS-CE
T ss_pred             CCeeEEEEEcCC------CCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCC-CEEEEeCC-hh
Confidence            456788877666      65544 4444348888876543211               1112223334 34455555 58


Q ss_pred             EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEEecccCceeeeec------ccCCceeEEE
Q psy15191        112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHLDVTTWKQIQTLP------CHQLTITQLA  184 (312)
Q Consensus       112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~d~~~~~~~~~~~------~~~~~v~~~~  184 (312)
                      .+|+..+.+.............-....|.++...++|..- .|+. .|..+++..+.....-..      -....|.++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~  363 (795)
T 4a2l_A          285 NIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV  363 (795)
T ss_dssp             EEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE
T ss_pred             heEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE
Confidence            8888776432211111000111134569999999988754 4555 555555544333221111      1245689999


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC-CCC-cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD-KTN-GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      ..++|+ |..|+.++-|..||..+..... +.... ... ......|.+++..+++++|..|+.++-|..||..++.   
T Consensus       364 ~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~---  438 (795)
T 4a2l_A          364 EDKDKN-LWIGTNDGGLNLYNPITQRFTS-YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ---  438 (795)
T ss_dssp             ECTTSC-EEEEESSSCEEEECTTTCCEEE-ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC---
T ss_pred             ECCCCC-EEEEECCCCeEEEcCCCCcEEE-EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc---
Confidence            988887 5567778789999987654332 22111 000 0123568899998888845556666679999977652   


Q ss_pred             ccccccccceeEEee-----ccCcceeEEEeccCCCeEEEE
Q psy15191        263 DLVQNTLWPEVQKLY-----GHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~  298 (312)
                                ...+.     .+...|.++...++|.+.+..
T Consensus       439 ----------~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt  469 (795)
T 4a2l_A          439 ----------VENFNQRNSQLVNENVYAILPDGEGNLWLGT  469 (795)
T ss_dssp             ----------EEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred             ----------EEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence                      22221     124568888888888766654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.50  E-value=0.00017  Score=62.36  Aligned_cols=183  Identities=9%  Similarity=0.052  Sum_probs=104.2

Q ss_pred             CCceEEEEEeC-CCCceEEEEccccCc-E----------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--
Q psy15191         24 KSKVMAVKWNG-EGGKVLYTLTNHKSK-V----------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--   89 (312)
Q Consensus        24 ~~~v~~~~w~~-~~~~~~~~~~~h~~~-v----------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--   89 (312)
                      .+.|.+  +|. .+|+.+.++...... +          ..+..  .      +..++.++.|+.+..+|..+++..-  
T Consensus        72 ~~~v~A--lD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~v~v~~~dg~l~alD~~tG~~~W~~  141 (571)
T 2ad6_A           72 PNNTYA--LNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--G------AGQIVKKQANGHLLALDAKTGKINWEV  141 (571)
T ss_dssp             TTCEEE--EETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--E------TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEE--EeCCCCccEEEEEcCCCCccccccccccccccccEE--E------CCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence            345544  578 789888887533210 0          11122  1      3467777889999999998887621  


Q ss_pred             -cc------cccCCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccC---------------------
Q psy15191         90 -PY------HMRDDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVG---------------------  133 (312)
Q Consensus        90 -~~------~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~---------------------  133 (312)
                       ..      .....+  .+..++.++.      ++.|..+|.++++..+..........                     
T Consensus       142 ~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~  221 (571)
T 2ad6_A          142 EVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGT  221 (571)
T ss_dssp             ECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHH
T ss_pred             cCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccccc
Confidence             00      111111  1235566554      78999999999776664432211000                     


Q ss_pred             ----------CCccceeEEEECCCCCeEEEeecC----------------CeEEE-ecccCceeeeecc--cC-------
Q psy15191        134 ----------GNTLGFYGCKFGPRGDYIIAHGFQ----------------GSLHL-DVTTWKQIQTLPC--HQ-------  177 (312)
Q Consensus       134 ----------~~~~~v~~~~~~~~~~~l~~~~~~----------------~~i~~-d~~~~~~~~~~~~--~~-------  177 (312)
                                +.......+++.++...++.+..+                +.+.- |.++++.+-.++.  |.       
T Consensus       222 ~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~  301 (571)
T 2ad6_A          222 KTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGV  301 (571)
T ss_dssp             HTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCC
T ss_pred             ccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccC
Confidence                      000001235666766666665532                13443 8888887766652  11       


Q ss_pred             -CceeEEEECCCCC---EEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        178 -LTITQLAFSPDDT---HLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       178 -~~v~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                       .++ -+...++|+   .++.++.+|.++++|..+++.+.....
T Consensus       302 ~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~  344 (571)
T 2ad6_A          302 NQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV  344 (571)
T ss_dssp             CCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             CCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence             111 122224674   577788999999999999888766553

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.48  E-value=6.7e-05  Score=64.94  Aligned_cols=141  Identities=10%  Similarity=0.011  Sum_probs=85.0

Q ss_pred             cEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEECCCCC---eEEEeecCCeEEE-ecccCceeeeecccC-----
Q psy15191        110 SIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFGPRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ-----  177 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~-----  177 (312)
                      .|..+|.++++..+........   ......++. +...++|+   .++.++.+|.+.. |..+++++-...-..     
T Consensus       273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~  351 (571)
T 2ad6_A          273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF  351 (571)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred             EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence            5889999987766554432110   001112221 22224674   5677888898888 888887765543111     


Q ss_pred             --------Cce--------------------------eEEEECCCCCEEEEEe---------------------------
Q psy15191        178 --------LTI--------------------------TQLAFSPDDTHLVSVS---------------------------  196 (312)
Q Consensus       178 --------~~v--------------------------~~~~~~~~~~~l~~~~---------------------------  196 (312)
                              .++                          ..++++|+..+++...                           
T Consensus       352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~  431 (571)
T 2ad6_A          352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM  431 (571)
T ss_dssp             EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred             ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence                    011                          2467888777776653                           


Q ss_pred             ----------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        197 ----------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       197 ----------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                                .+|.|..||+.+++..-......        .+....+...+..++.++.||.|+.+|..++.
T Consensus       432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~  496 (571)
T 2ad6_A          432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGK  496 (571)
T ss_dssp             EECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--------CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             ccCccccCCCCCCeEEEEECCCCCEEEEecCCC--------CccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence                      24789999998888766655321        11112222245667778999999999998874

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.47  E-value=0.00021  Score=54.63  Aligned_cols=204  Identities=10%  Similarity=0.111  Sum_probs=118.5

Q ss_pred             EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc---------ccCCCCCceEEEEeCCCcEE
Q psy15191         42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH---------MRDDSKQLHLLSCSMDKSII  112 (312)
Q Consensus        42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---------~~~~~~~~~l~~~~~d~~i~  112 (312)
                      .+.+-.+.+..++|.|+    . +.+++....++.|...|.. ++......         .....++.++++.-.++.+.
T Consensus        21 ~l~g~~~~lSGla~~~~----~-~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~   94 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQ----S-NTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIY   94 (255)
T ss_dssp             ECTTCCSCEEEEEEETT----T-TEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred             ECCCcccCcceeEEeCC----C-CEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence            45566678999999987    1 3445556667788888876 44322111         11134454556655677888


Q ss_pred             EEcCCCCccee-eeeeeecc-cCCCccceeEEEECCCCCeEEEeecCCeEEE---e--cccCceeeeec-------ccCC
Q psy15191        113 VWAPDPTTGLW-LETARVGE-VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---D--VTTWKQIQTLP-------CHQL  178 (312)
Q Consensus       113 i~d~~~~~~~~-~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d--~~~~~~~~~~~-------~~~~  178 (312)
                      ++++....... ........ ....+.....++|+|.++.|+++.......+   +  ....++ ....       .+..
T Consensus        95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l-~i~~~~~~~~~~~~~  173 (255)
T 3qqz_A           95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNEL-HISKDKALQRQFTLD  173 (255)
T ss_dssp             EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCC-EEEECHHHHHTCCSS
T ss_pred             EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCce-eeecchhhccccccC
Confidence            88876644211 12222111 1234556899999999988887776655444   2  011111 1110       1234


Q ss_pred             ceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc--ccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        179 TITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG--VHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       179 ~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      .+..++++|. +.+++....++.+..+|.. ++....+........  ..-.....|+|.++|++.++ ++-+.++++.
T Consensus       174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~  250 (255)
T 3qqz_A          174 DVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT  250 (255)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred             CceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence            5789999995 4555666677889999977 445555443321100  01235678999999985555 7777666664

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.46  E-value=0.00077  Score=60.95  Aligned_cols=222  Identities=6%  Similarity=-0.053  Sum_probs=129.3

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------cccccCCCCCceEEEEeCCCcEE
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------PYHMRDDSKQLHLLSCSMDKSII  112 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~d~~i~  112 (312)
                      ..|.++...++      |.+.+ |..+ -|.+||..++....               +..+....++ .+..|+.++-|.
T Consensus       263 ~~i~~i~~d~~------g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWigt~~~Gl~  333 (795)
T 4a2l_A          263 NYIRSLAMDSQ------NRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-GMWLGTYFGGLN  333 (795)
T ss_dssp             SBEEEEEECTT------SCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-CEEEEESSSCEE
T ss_pred             CeEEEEEEcCC------CCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-CEEEEECCCCeE
Confidence            56888877666      65444 4444 48888876544311               1111122333 466677777788


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-CeEEEecccCceeeeec--------ccCCceeEE
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-GSLHLDVTTWKQIQTLP--------CHQLTITQL  183 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~d~~~~~~~~~~~--------~~~~~v~~~  183 (312)
                      .++..+........... .-.-....|.++...++|.+ .+|+.+ |..+++..+.....-..        .....|.++
T Consensus       334 ~~~~~~~~~~~~~~~~~-~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i  411 (795)
T 4a2l_A          334 YYHPIRNRFKNIRNIPY-KNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAV  411 (795)
T ss_dssp             EECGGGGSSEEECCCTT-SSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEE
T ss_pred             EeCCCcccceEEcCCCC-CCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEE
Confidence            88765432111111000 00112346889998888874 456655 55555655444332211        123578999


Q ss_pred             EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc
Q psy15191        184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED  263 (312)
Q Consensus       184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~  263 (312)
                      ...++++.|..|+.++-|..+|..+.+.. .+......  .....|.++...++|.+.+... +| |.+||..++.    
T Consensus       412 ~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~--l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~~~~----  482 (795)
T 4a2l_A          412 YVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQ--LVNENVYAILPDGEGNLWLGTL-SA-LVRFNPEQRS----  482 (795)
T ss_dssp             EEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSC--CSCSCEEEEEECSSSCEEEEES-SC-EEEEETTTTE----
T ss_pred             EEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCC--cCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCCCCe----
Confidence            99888885677788788999998865533 33221111  1345689999998888776554 55 8888876541    


Q ss_pred             cccccccceeEEee-------ccCcceeEEEeccCCCeEEEE
Q psy15191        264 LVQNTLWPEVQKLY-------GHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       264 ~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~  298 (312)
                               ...+.       -....|.++...++|.+.+..
T Consensus       483 ---------~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt  515 (795)
T 4a2l_A          483 ---------FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG  515 (795)
T ss_dssp             ---------EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred             ---------EEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence                     11111       123568888888888876655

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.43  E-value=8.5e-05  Score=64.42  Aligned_cols=142  Identities=9%  Similarity=0.018  Sum_probs=82.7

Q ss_pred             CcEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEEC-CCC---CeEEEeecCCeEEE-ecccCceeeeeccc----
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFG-PRG---DYIIAHGFQGSLHL-DVTTWKQIQTLPCH----  176 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~-~~~---~~l~~~~~~~~i~~-d~~~~~~~~~~~~~----  176 (312)
                      +.|..+|.++++..+..+.....   +.....++. +... .+|   +.++.++.+|.+.. |.++++++-.....    
T Consensus       278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~  356 (599)
T 1w6s_A          278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN  356 (599)
T ss_dssp             SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred             ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcc
Confidence            37899999987766654432110   001112221 2222 467   45777889999888 88888876544311    


Q ss_pred             --------C-Cce--------------------------eEEEECCCCCEEEEEe-------------------------
Q psy15191        177 --------Q-LTI--------------------------TQLAFSPDDTHLVSVS-------------------------  196 (312)
Q Consensus       177 --------~-~~v--------------------------~~~~~~~~~~~l~~~~-------------------------  196 (312)
                              . .++                          ..++++|+..++++..                         
T Consensus       357 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~  436 (599)
T 1w6s_A          357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATL  436 (599)
T ss_dssp             SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred             cccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccc
Confidence                    0 011                          2456777666555432                         


Q ss_pred             --------------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        197 --------------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       197 --------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                                    .+|.|..||+.+++..-......        +...-.+.-.+.+++.++.||.|+.||.+++.
T Consensus       437 ~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~--------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~  505 (599)
T 1w6s_A          437 NMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF--------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGD  505 (599)
T ss_dssp             EEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS--------CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             eeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC--------CccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence                          34678888888877665554211        11111112245677779999999999999984

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.39  E-value=0.00048  Score=59.77  Aligned_cols=184  Identities=9%  Similarity=0.031  Sum_probs=107.2

Q ss_pred             CCceEEEEEeC-CCCceEEEEccccCc-----------EEEEEEecCcCcCCCCce----EEEecCCCcEEEeeecCCcc
Q psy15191         24 KSKVMAVKWNG-EGGKVLYTLTNHKSK-----------VMAVKWVLNTSLDPEHKD----LVSCSLDKTAILWKYVSEGN   87 (312)
Q Consensus        24 ~~~v~~~~w~~-~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~~~~~~~----l~s~~~dg~i~vw~~~~~~~   87 (312)
                      .+.|.  ++|. .+|+.+.++......           ...+++.|.      +..    ++.++.|+.+.-+|..+++.
T Consensus        72 ~~~v~--AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~------~g~~~~rV~v~t~dg~l~AlDa~TG~~  143 (599)
T 1w6s_A           72 PNNTF--ALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPG------DGKTPALILKTQLDGNVAALNAETGET  143 (599)
T ss_dssp             TTCEE--EEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECC------CSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred             CCEEE--EEeCCCCCcEEEEECCCCCccccccccccccccceEEEec------CCcceeEEEEEcCCCEEEEEECCCCCE
Confidence            34554  4678 889998887643221           122344332      233    77788899999999888876


Q ss_pred             cc---cc------cccCCC--CCceEEEEe------CCCcEEEEcCCCCcceeeeeeeecccC-----C-----------
Q psy15191         88 YL---PY------HMRDDS--KQLHLLSCS------MDKSIIVWAPDPTTGLWLETARVGEVG-----G-----------  134 (312)
Q Consensus        88 ~~---~~------~~~~~~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~-----~-----------  134 (312)
                      .-   ..      .....|  .+..+++++      .++.|+.+|.++++..+..........     .           
T Consensus       144 ~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~  223 (599)
T 1w6s_A          144 VWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQK  223 (599)
T ss_dssp             EEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCT
T ss_pred             EEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccccc
Confidence            21   00      011111  123555555      378999999999777665443211100     0           


Q ss_pred             --------------Cccce-eEEEECCCCCeEEEeecCC----------------eEEE-ecccCceeeeecc--cC---
Q psy15191        135 --------------NTLGF-YGCKFGPRGDYIIAHGFQG----------------SLHL-DVTTWKQIQTLPC--HQ---  177 (312)
Q Consensus       135 --------------~~~~v-~~~~~~~~~~~l~~~~~~~----------------~i~~-d~~~~~~~~~~~~--~~---  177 (312)
                                    ....+ ..+++.++...++.+..++                .+.- |.++++.+-.++.  |.   
T Consensus       224 ~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd  303 (599)
T 1w6s_A          224 GLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWD  303 (599)
T ss_dssp             THHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred             ccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcccc
Confidence                          00001 1356667777777766542                4433 9888888776652  21   


Q ss_pred             -----CceeEEEEC-CCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        178 -----LTITQLAFS-PDD---THLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       178 -----~~v~~~~~~-~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                           .++. +... .+|   ..++.++.+|.++++|.++++.+....
T Consensus       304 ~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          304 YAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             CCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence                 1111 2222 467   467778899999999999988876655

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.36  E-value=0.00029  Score=61.09  Aligned_cols=168  Identities=13%  Similarity=0.086  Sum_probs=96.8

Q ss_pred             CcEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEEC-CCCC---eEEEeecCCeEEE-ecccCceeeeecccC---
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFG-PRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ---  177 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~-~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~---  177 (312)
                      +.|..+|.++++..+........   +.....++. +... .+|+   .++.++.+|.++. |.++++++-......   
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~  369 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT  369 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence            57999999997776654432110   001112221 2221 4664   6778889999988 888887765443111   


Q ss_pred             ----------Cc--------------------------------eeEEEECCCCCEEEEEe-------------------
Q psy15191        178 ----------LT--------------------------------ITQLAFSPDDTHLVSVS-------------------  196 (312)
Q Consensus       178 ----------~~--------------------------------v~~~~~~~~~~~l~~~~-------------------  196 (312)
                                .+                                -..++++|+...+++..                   
T Consensus       370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~  449 (582)
T 1flg_A          370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA  449 (582)
T ss_dssp             SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred             ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence                      00                                01356677655555432                   


Q ss_pred             --------------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        197 --------------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       197 --------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                                    .+|.|..||+.+++..-......        ++..-.....+.+++.++.||.++.||.+++.   
T Consensus       450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~---  518 (582)
T 1flg_A          450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK---  518 (582)
T ss_dssp             CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--------CCCSCCEEETTTEEEEECTTSEEEEEETTTCC---
T ss_pred             eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--------CCcccceEeCCCEEEEECCCCcEEEEECCCCC---
Confidence                          25789999999888766555321        11111111245677779999999999999884   


Q ss_pred             ccccccccceeEEeeccCcc-eeEEEeccCCCeEEE
Q psy15191        263 DLVQNTLWPEVQKLYGHGYE-IYSLAASHDGTLLAS  297 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s  297 (312)
                               .+-++...... -.-+.+..+|+..++
T Consensus       519 ---------~lW~~~~~~g~~a~P~~y~~~G~qYv~  545 (582)
T 1flg_A          519 ---------ELWKFQTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             ---------EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ---------EEEEecCCCCcccCceEEEECCEEEEE
Confidence                     34444432221 122667788874443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.28  E-value=0.00031  Score=62.97  Aligned_cols=190  Identities=12%  Similarity=-0.012  Sum_probs=103.4

Q ss_pred             cEEEEEEe-cCcCcCCCCceEEEecC-C----CcEEEeeecCC-cccc------cccccCCCCCceEEEEeCC-----Cc
Q psy15191         49 KVMAVKWV-LNTSLDPEHKDLVSCSL-D----KTAILWKYVSE-GNYL------PYHMRDDSKQLHLLSCSMD-----KS  110 (312)
Q Consensus        49 ~v~~~~~~-~~~~~~~~~~~l~s~~~-d----g~i~vw~~~~~-~~~~------~~~~~~~~~~~~l~~~~~d-----~~  110 (312)
                      .+...+|+ |+      |++||-+.. +    .+|+++|+.++ +.+.      .....+++++..|+....+     ..
T Consensus       175 ~~~~~~~S~PD------G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~  248 (751)
T 2xe4_A          175 DVMEVKPAPPE------HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENK  248 (751)
T ss_dssp             EEEEEEECTTT------TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred             EEeeeEecCCC------CCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence            67888999 88      888774432 2    35999999988 5311      1234457787777766654     35


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC---CeEEE-ecccC--ce--eeeecccCCceeE
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ---GSLHL-DVTTW--KQ--IQTLPCHQLTITQ  182 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~i~~-d~~~~--~~--~~~~~~~~~~v~~  182 (312)
                      |..+++.+..........    .........+.|+|||++|+....+   ..+.+ |+.+.  ..  ............+
T Consensus       249 v~~~~lgt~~~~~~lv~~----~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s  324 (751)
T 2xe4_A          249 VWRHVMGKLQSEDVCLYE----EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD  324 (751)
T ss_dssp             EEEEETTSCGGGCEEEEE----CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred             EEEEECCCCchhcEEEEe----cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence            777888764322111111    0112235678999999998876532   34555 66654  22  2222223344555


Q ss_pred             EEECCCCCEEEEEecC----CeEEEEEccCCCeEE--EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe--EEEEe
Q psy15191        183 LAFSPDDTHLVSVSRD----RRWGLYKRQSSGRLS--LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV--CVVWG  254 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--i~iwd  254 (312)
                      +.|+.++.+++....+    ..|..+|+.+.....  .+...      ....+..+.+. .+.++++...++.  |++++
T Consensus       325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~------~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d  397 (751)
T 2xe4_A          325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS------EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM  397 (751)
T ss_dssp             EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC------SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred             EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC------CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence            6654444444444443    256666765422211  12211      12245556665 3455666677785  44555


Q ss_pred             c
Q psy15191        255 L  255 (312)
Q Consensus       255 ~  255 (312)
                      +
T Consensus       398 l  398 (751)
T 2xe4_A          398 A  398 (751)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.23  E-value=0.0011  Score=57.42  Aligned_cols=179  Identities=12%  Similarity=0.117  Sum_probs=103.6

Q ss_pred             EEEeCCCCceEEEEccccCcE---------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---ccc------
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKV---------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---LPY------   91 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v---------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---~~~------   91 (312)
                      .++|..+|+.+.++......-         ..+.+.        +..++.++.|+.|.-+|..+++..   ...      
T Consensus        81 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~--------~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~  152 (582)
T 1flg_A           81 FALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--------GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGY  152 (582)
T ss_dssp             EEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--------TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTC
T ss_pred             EEEECCCCcEEEEEcCCCCcccccccccCCCccEEE--------CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCc
Confidence            446888899888876442210         111221        346777778899999998888762   000      


Q ss_pred             cccCCC---C----Cc-eEEEEe------CCCcEEEEcCCCCcceeeeeeeeccc-------------C-----------
Q psy15191         92 HMRDDS---K----QL-HLLSCS------MDKSIIVWAPDPTTGLWLETARVGEV-------------G-----------  133 (312)
Q Consensus        92 ~~~~~~---~----~~-~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~-----------  133 (312)
                      .....|   +    +. .+++++      .++.|..+|..+++..+........+             .           
T Consensus       153 ~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~  232 (582)
T 1flg_A          153 TMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNS  232 (582)
T ss_dssp             BCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTS
T ss_pred             ccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCcccc
Confidence            000111   1    11 455554      37899999999987776432210000             0           


Q ss_pred             ----------CCccceeEEEECCCCCeEEEeec--------------------C----CeEEE-ecccCceeeeecc--c
Q psy15191        134 ----------GNTLGFYGCKFGPRGDYIIAHGF--------------------Q----GSLHL-DVTTWKQIQTLPC--H  176 (312)
Q Consensus       134 ----------~~~~~v~~~~~~~~~~~l~~~~~--------------------~----~~i~~-d~~~~~~~~~~~~--~  176 (312)
                                +....-..+++.|+...++.+..                    |    +.|.- |.++++.+-.++.  |
T Consensus       233 ~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~  312 (582)
T 1flg_A          233 PTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPN  312 (582)
T ss_dssp             TTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTT
T ss_pred             ccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCC
Confidence                      00001123567777777776653                    1    34544 8888888777652  2


Q ss_pred             C--------CceeEEEEC-CCCC---EEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        177 Q--------LTITQLAFS-PDDT---HLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       177 ~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .        .++. +... .+|+   .++.++.+|.++++|..+++.+.....
T Consensus       313 d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~  364 (582)
T 1flg_A          313 DAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF  364 (582)
T ss_dssp             CCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             CcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence            1        1111 1221 4664   788899999999999999888766554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.19  E-value=0.00035  Score=62.68  Aligned_cols=151  Identities=9%  Similarity=-0.007  Sum_probs=85.3

Q ss_pred             cccCC-CCCceEEEEeC-CC----cEEEEcCCCC-cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----e
Q psy15191         92 HMRDD-SKQLHLLSCSM-DK----SIIVWAPDPT-TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----S  159 (312)
Q Consensus        92 ~~~~~-~~~~~l~~~~~-d~----~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~  159 (312)
                      ...++ |++.+++.... +|    .|+++|+.++ +... ...        ......++|+||++.|+....+.     .
T Consensus       178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~--------~~~~~~~~WspDg~~l~y~~~d~~~~~~~  248 (751)
T 2xe4_A          178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV--------SGTNGEIVWGPDHTSLFYVTKDETLRENK  248 (751)
T ss_dssp             EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE--------EEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred             eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc--------cCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence            34557 88877765433 22    4999999885 4110 001        11134689999999888776542     3


Q ss_pred             EEE-ecccCcee--eeec-ccCCceeEEEECCCCCEEEEEec---CCeEEEEEccCCC-eE--EEEeccCCCCcccceee
Q psy15191        160 LHL-DVTTWKQI--QTLP-CHQLTITQLAFSPDDTHLVSVSR---DRRWGLYKRQSSG-RL--SLVACSDKTNGVHKRII  229 (312)
Q Consensus       160 i~~-d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~-~~--~~~~~~~~~~~~~~~~v  229 (312)
                      |.+ ++.+....  ..+. ........+.|+|||++|+..+.   ...|+++|+.+.. ..  ..+...      .....
T Consensus       249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~------~~~~~  322 (751)
T 2xe4_A          249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR------EKGVR  322 (751)
T ss_dssp             EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC------CTTCC
T ss_pred             EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC------CCCce
Confidence            555 65554321  1111 22334567899999998887653   3468888887652 22  222211      22334


Q ss_pred             EEEEEcCCCceEEEeccC----CeEEEEecCC
Q psy15191        230 WGVAWSHDSRYFLTISRD----GVCVVWGLGE  257 (312)
Q Consensus       230 ~~~~~~~~~~~l~s~~~d----g~i~iwd~~~  257 (312)
                      ..+.|+.++.+++....+    ..|..+++..
T Consensus       323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             EEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            455555555555555444    2666677654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.18  E-value=0.00097  Score=55.56  Aligned_cols=142  Identities=10%  Similarity=0.028  Sum_probs=82.0

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC------CeEEEecc-cCceeeee
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ------GSLHLDVT-TWKQIQTL  173 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~d~~-~~~~~~~~  173 (312)
                      .|+.+...+.|+.+|..+......        ......+..++++++++ |+++...      +.+.++.. .+.....+
T Consensus       154 ~Lyv~D~~~~I~~id~~~g~v~~~--------~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~  224 (433)
T 4hw6_A          154 DLYWVGQRDAFRHVDFVNQYVDIK--------TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSL  224 (433)
T ss_dssp             EEEEECBTSCEEEEETTTTEEEEE--------CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEE
T ss_pred             EEEEEeCCCCEEEEECCCCEEEEe--------ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccc
Confidence            444444447888888765332111        12334578999999999 4444431      23444222 12111111


Q ss_pred             cccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEeccCCeEE
Q psy15191        174 PCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTISRDGVCV  251 (312)
Q Consensus       174 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~  251 (312)
                      . .......++++| ++.++++-..++.|+.+|..+......+....     .......++|+|++++ +++-...+.|+
T Consensus       225 ~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-----~~~~~~~ia~dpdG~~LYvad~~~~~I~  298 (433)
T 4hw6_A          225 C-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD-----TKGSNFHIVWHPTGDWAYIIYNGKHCIY  298 (433)
T ss_dssp             E-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS-----CCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred             c-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC-----CCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence            1 234456789999 67766666677889999987665422222111     1112346999999984 45555678999


Q ss_pred             EEecCC
Q psy15191        252 VWGLGE  257 (312)
Q Consensus       252 iwd~~~  257 (312)
                      .+++..
T Consensus       299 ~~~~d~  304 (433)
T 4hw6_A          299 RVDYNR  304 (433)
T ss_dssp             EEEBCT
T ss_pred             EEeCCC
Confidence            988753

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.13  E-value=0.0015  Score=58.98  Aligned_cols=218  Identities=12%  Similarity=0.025  Sum_probs=123.2

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAP  116 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~  116 (312)
                      ..|.++...++      +. |..|..++-|..++..++...           .+..+...+++ .|..|+.++-|..++.
T Consensus       363 ~~v~~i~~d~~------g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~  434 (781)
T 3v9f_A          363 KVVSSVCDDGQ------GK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNT  434 (781)
T ss_dssp             SCEEEEEECTT------SC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEECS
T ss_pred             cceEEEEEcCC------CC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEEcC
Confidence            45777776655      54 455555556888876543221           11112222333 4555666667888887


Q ss_pred             CCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeeccc-----CCceeEEEECCCCCE
Q psy15191        117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCH-----QLTITQLAFSPDDTH  191 (312)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~  191 (312)
                      .+.+...   ....  ......|.++...+++.. ..|+..|..++|..+.+........     ...|.++...++|.+
T Consensus       435 ~~~~~~~---~~~~--~~~~~~v~~i~~d~~g~l-wigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l  508 (781)
T 3v9f_A          435 RLKKFQI---IELE--KNELLDVRVFYEDKNKKI-WIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF  508 (781)
T ss_dssp             SSCEEEE---CCST--TTCCCCEEEEEECTTSEE-EEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE
T ss_pred             CCCcEEE---eccC--CCCCCeEEEEEECCCCCE-EEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE
Confidence            6533211   1100  123456888888888764 4455566666666654443322211     467899999998875


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP  271 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  271 (312)
                      . .|+.++-+..+|..+.+ ...+....   ......|.++...++|.+.++.. +|.|..||..+..            
T Consensus       509 W-igt~~~Gl~~~~~~~~~-~~~~~~~~---~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~------------  570 (781)
T 3v9f_A          509 W-IGTFGGGVGIYTPDMQL-VRKFNQYE---GFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD------------  570 (781)
T ss_dssp             E-EEESSSCEEEECTTCCE-EEEECTTT---TCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC------------
T ss_pred             E-EEEcCCCEEEEeCCCCe-EEEccCCC---CCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc------------
Confidence            5 45554457778876543 33333211   11345688999999998777655 6654888776542            


Q ss_pred             eeEEeec----cCcceeEEEeccCCCeEEEE
Q psy15191        272 EVQKLYG----HGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       272 ~~~~~~~----~~~~v~~~~~s~~~~~l~s~  298 (312)
                       ...+..    ....|.++...++|++.+++
T Consensus       571 -~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t  600 (781)
T 3v9f_A          571 -YQVFQRKEGLPNTHIRAISEDKNGNIWAST  600 (781)
T ss_dssp             -CEEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred             -EEEccccCCCCCceEEEEEECCCCCEEEEc
Confidence             111111    12346677777777665554

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.12  E-value=0.00044  Score=61.03  Aligned_cols=221  Identities=9%  Similarity=0.040  Sum_probs=112.0

Q ss_pred             CceEEEecCCC-----------cEEEeeecCCcccccc--------cc---cCCCCCceEEEEeC-CCcEEEEcCCCCcc
Q psy15191         65 HKDLVSCSLDK-----------TAILWKYVSEGNYLPY--------HM---RDDSKQLHLLSCSM-DKSIIVWAPDPTTG  121 (312)
Q Consensus        65 ~~~l~s~~~dg-----------~i~vw~~~~~~~~~~~--------~~---~~~~~~~~l~~~~~-d~~i~i~d~~~~~~  121 (312)
                      +++++.|+.+.           .+.+||..+++...+.        ++   ....++..++.|+. +..+.+||..+.  
T Consensus       198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--  275 (656)
T 1k3i_A          198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--  275 (656)
T ss_dssp             TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--
T ss_pred             CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCC--
Confidence            78888887543           5888998877642211        11   11245667788774 457999998873  


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCeEEEee-cC-----CeEEE-ecc--cCceeeee--cccCCceeEEEECCCCC
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQ-----GSLHL-DVT--TWKQIQTL--PCHQLTITQLAFSPDDT  190 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-----~~i~~-d~~--~~~~~~~~--~~~~~~v~~~~~~~~~~  190 (312)
                      .+....   .+..... -.+++..++++.++.|+ .+     ..+.+ |..  +|......  ......-....+..++.
T Consensus       276 ~W~~~~---~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~  351 (656)
T 1k3i_A          276 SWIPGP---DMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNH  351 (656)
T ss_dssp             EEEECC---CCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCS
T ss_pred             ceeECC---CCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCc
Confidence            333221   1111111 23456668999999988 34     33555 554  34443110  00000000012234455


Q ss_pred             EEEEEecC---------CeEEEEEccCCCeEEEEeccCCCC--cccceeeEEEEEc-CCCceEEEeccCC----------
Q psy15191        191 HLVSVSRD---------RRWGLYKRQSSGRLSLVACSDKTN--GVHKRIIWGVAWS-HDSRYFLTISRDG----------  248 (312)
Q Consensus       191 ~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~-~~~~~l~s~~~dg----------  248 (312)
                      .++.++.+         ..+..||..+..............  ......-.++.|. .++++++.|+.++          
T Consensus       352 iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~  431 (656)
T 1k3i_A          352 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNA  431 (656)
T ss_dssp             CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCE
T ss_pred             eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcc
Confidence            55555444         356788887765443222110000  0000112344443 3788888888543          


Q ss_pred             -eEEEEecCCCCCCcccccccccceeEEeeccCcc-eeEEEeccCCCeEEEEecC
Q psy15191        249 -VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE-IYSLAASHDGTLLASACKA  301 (312)
Q Consensus       249 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~s~d  301 (312)
                       .|.+||..+..          |..+..-..+... -.+++..|++++++.|+.+
T Consensus       432 ~~v~~yd~~~~~----------W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~  476 (656)
T 1k3i_A          432 HIITLGEPGTSP----------NTVFASNGLYFARTFHTSVVLPDGSTFITGGQR  476 (656)
T ss_dssp             EEEECCSTTSCC----------EEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred             eEEEcCCCCCCC----------eeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence             56677665431          2222100111222 2344567899999999754

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.09  E-value=0.00041  Score=57.80  Aligned_cols=141  Identities=9%  Similarity=0.098  Sum_probs=84.7

Q ss_pred             ceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-C----eEEEEEccCCC
Q psy15191        138 GFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-R----RWGLYKRQSSG  210 (312)
Q Consensus       138 ~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~~wd~~~~~  210 (312)
                      ....++++| ++..|+++...+.|+. |+....+..... .......+++++++++|+.+... +    .+..++.....
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~  216 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF  216 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence            467889998 4566666665455655 776655444333 44568899999999966665542 2    34444443221


Q ss_pred             e-EEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe
Q psy15191        211 R-LSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA  288 (312)
Q Consensus       211 ~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  288 (312)
                      . ...+.        .......++++| ++.++++-..++.|+.++.......          .+... +.....+.++|
T Consensus       217 ~~~~~l~--------~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~----------~~~~~-~~~~~P~gia~  277 (430)
T 3tc9_A          217 KVITELT--------KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT----------PLFTI-QDSGWEFHIQF  277 (430)
T ss_dssp             CSEEEEE--------ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE----------EEEEC-SSSSCCEEEEE
T ss_pred             eeeeeec--------cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE----------EEEEc-CCCCcceeEEE
Confidence            1 11222        112245788999 7777777777889999998754110          11111 11234678999


Q ss_pred             ccCCCeEEEE
Q psy15191        289 SHDGTLLASA  298 (312)
Q Consensus       289 s~~~~~l~s~  298 (312)
                      +|+|++|..+
T Consensus       278 ~pdG~~lyv~  287 (430)
T 3tc9_A          278 HPSGNYAYIV  287 (430)
T ss_dssp             CTTSSEEEEE
T ss_pred             cCCCCEEEEE
Confidence            9999955444

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.03  E-value=0.0006  Score=56.80  Aligned_cols=153  Identities=8%  Similarity=0.022  Sum_probs=90.4

Q ss_pred             cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-C----eEEE-
Q psy15191         90 PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-G----SLHL-  162 (312)
Q Consensus        90 ~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~----~i~~-  162 (312)
                      +..+..++ +...|+.+...+.|+.+|+.......+   .     ........++++++++.|+++... +    .+.+ 
T Consensus       139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~-----~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~  210 (430)
T 3tc9_A          139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV---Y-----SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL  210 (430)
T ss_dssp             CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE---E-----CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred             CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE---e-----cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence            33444454 234555555557888888876332211   1     133457889999999966666542 1    2333 


Q ss_pred             ecc-cCceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce
Q psy15191        163 DVT-TWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY  240 (312)
Q Consensus       163 d~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  240 (312)
                      +.. .+.....+. .......++++| ++.++++-..++.|..++.............      .......++|+|++++
T Consensus       211 ~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~------~~~~P~gia~~pdG~~  283 (430)
T 3tc9_A          211 TRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ------DSGWEFHIQFHPSGNY  283 (430)
T ss_dssp             EGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS------SSSCCEEEEECTTSSE
T ss_pred             eCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC------CCCcceeEEEcCCCCE
Confidence            322 122112222 223457789999 6776666667789999998755432222221      1234668999999994


Q ss_pred             -EEEeccCCeEEEEecCC
Q psy15191        241 -FLTISRDGVCVVWGLGE  257 (312)
Q Consensus       241 -l~s~~~dg~i~iwd~~~  257 (312)
                       +++-...+.|..++...
T Consensus       284 lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          284 AYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             EEEEETTTTEEEEEEEET
T ss_pred             EEEEECCCCEEEEEeCCc
Confidence             45555678899987653

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.95  E-value=0.0041  Score=49.10  Aligned_cols=183  Identities=11%  Similarity=0.029  Sum_probs=97.0

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC-eE-EEecccCceeee
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG-SL-HLDVTTWKQIQT  172 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~-~i-~~d~~~~~~~~~  172 (312)
                      .+++.++++-..++.|..+|.....   .....      ....+..+++.++++++++... ++ .+ ++|..+.++...
T Consensus        40 ~~~g~lyv~d~~~~~I~~~d~~g~~---~~~~~------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~  110 (306)
T 2p4o_A           40 APDGTIFVTNHEVGEIVSITPDGNQ---QIHAT------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  110 (306)
T ss_dssp             CTTSCEEEEETTTTEEEEECTTCCE---EEEEE------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CCCCCEEEEeCCCCeEEEECCCCce---EEEEe------CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence            4455556665677888888876521   11111      1235788999999996555433 23 23 336666655432


Q ss_pred             ec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCC--CCcccceeeEEEEEcCCCceEE-EeccC
Q psy15191        173 LP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDK--TNGVHKRIIWGVAWSHDSRYFL-TISRD  247 (312)
Q Consensus       173 ~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~-s~~~d  247 (312)
                      .. ........++..+++..+++-..++.|+.+|..... .+........  .........+.+  +|++++|+ +-...
T Consensus       111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~  188 (306)
T 2p4o_A          111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK  188 (306)
T ss_dssp             EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred             EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence            22 112233455555655545554468889999876432 1211111000  000011234455  78887554 45567


Q ss_pred             CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      +.|..|++.......         ....+. .......++++++|+++++..
T Consensus       189 ~~I~~~~~~~~g~~~---------~~~~~~-~~~~P~gi~vd~dG~l~va~~  230 (306)
T 2p4o_A          189 MLLLRIPVDSTDKPG---------EPEIFV-EQTNIDDFAFDVEGNLYGATH  230 (306)
T ss_dssp             TEEEEEEBCTTSCBC---------CCEEEE-ESCCCSSEEEBTTCCEEEECB
T ss_pred             CEEEEEEeCCCCCCC---------ccEEEe-ccCCCCCeEECCCCCEEEEeC
Confidence            899999987521100         011111 113456788888888766653

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.92  E-value=0.005  Score=49.17  Aligned_cols=144  Identities=11%  Similarity=0.157  Sum_probs=84.2

Q ss_pred             ccceeEEEECCCCCeEEEeecCCeEEE--e--cccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGFQGSLHL--D--VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~--d--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      ...+..+.+.+++.+++++. +|.+..  |  -.+|+....  .....+..+.+.+++..+ .++.+|.+++.+...++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~t  237 (327)
T 2xbg_A          162 IGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNR--TTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSEN  237 (327)
T ss_dssp             CCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEEC--CSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEE
T ss_pred             CcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCC--CCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCe
Confidence            34688899999888776654 455555  4  467877643  345678899999988755 455688877764221222


Q ss_pred             EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ...+..+.   ......+.++++.+++.+++++. +|.| .+....+         +.|+.+.........+.++.|.++
T Consensus       238 W~~~~~~~---~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG---------~tW~~~~~~~~~~~~~~~v~~~~~  303 (327)
T 2xbg_A          238 WGELLSPL---RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG---------QTWQQDVDVKKVPSNFYKILFFSP  303 (327)
T ss_dssp             ECCCBCTT---SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT---------SSCEECGGGTTSSSCCCEEEEEET
T ss_pred             eEeccCCc---ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC---------cccEEcCccCCCCCCeEEEEEECC
Confidence            22111110   00223478899998887777655 5655 2333322         334333222123456788999766


Q ss_pred             CCeEEEE
Q psy15191        292 GTLLASA  298 (312)
Q Consensus       292 ~~~l~s~  298 (312)
                      +. ++.+
T Consensus       304 ~~-~~~~  309 (327)
T 2xbg_A          304 DQ-GFIL  309 (327)
T ss_dssp             TE-EEEE
T ss_pred             Cc-eEEE
Confidence            65 5555

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.91  E-value=0.0062  Score=49.89  Aligned_cols=206  Identities=9%  Similarity=-0.091  Sum_probs=116.8

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc--------ccCCC-CCceEE
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH--------MRDDS-KQLHLL  103 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--------~~~~~-~~~~l~  103 (312)
                      ++++......+.+ ...+..++|.+.     ++.++++-...+.|..+++.......+..        +...+ .+.+++
T Consensus       102 ~~~~~~~~~~~~~-~~~~~gl~~d~~-----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~  175 (386)
T 3v65_B          102 LPHRSEYTLLLNN-LENAIALDFHHR-----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW  175 (386)
T ss_dssp             CTTSCCCEEEECS-CSCEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred             ccCCCcEEEEecC-CCccEEEEEecC-----CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence            4554444444443 345789999875     24556666677889999887654321111        11121 233344


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC--CeEEE-ecccCceeeeecccCCce
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ--GSLHL-DVTTWKQIQTLPCHQLTI  180 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~-d~~~~~~~~~~~~~~~~v  180 (312)
                      +-...+.|.+.+++......+.       .........++++|.+..|+.+...  +.|.. ++..-.........-...
T Consensus       176 ~d~~~~~I~~~~~dg~~~~~l~-------~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P  248 (386)
T 3v65_B          176 TDSGTSRIEVANLDGAHRKVLL-------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP  248 (386)
T ss_dssp             EETTTTEEEECBTTSCSCEEEE-------CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred             EcCCCCeEEEEeCCCCceEEee-------cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCe
Confidence            4445566777776542211111       1223456889999977766665433  45655 554322222222223456


Q ss_pred             eEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        181 TQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +.|+++|++..|+.+ +..+.|..+|+........+..       ......++++ ..+.++++-...+.|..++..++.
T Consensus       249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~  320 (386)
T 3v65_B          249 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK  320 (386)
T ss_dssp             EEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS-------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred             eeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC-------CCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCc
Confidence            899999866655554 4567899999875444333332       1223567777 355666677778889888855553

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.89  E-value=0.013  Score=52.93  Aligned_cols=224  Identities=9%  Similarity=-0.040  Sum_probs=123.4

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc----------------------cccccCCCCCceEEEE
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL----------------------PYHMRDDSKQLHLLSC  105 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~----------------------~~~~~~~~~~~~l~~~  105 (312)
                      ..|.++...++      |. |..|...+-|.++|..+.....                      +..+....++ .+-.|
T Consensus       258 ~~i~~i~~d~~------g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-~lWig  329 (781)
T 3v9f_A          258 SYIFSIKQLKD------NK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-NIWIG  329 (781)
T ss_dssp             CCEEEEEECTT------SE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC-CEEEE
T ss_pred             ceEEEEEECCC------CC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC-CEEEE
Confidence            45777776665      55 4445554557788876543211                      1111112233 46667


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeee--cccCCCccceeEEEECCCCCeEEEee-cCCeEEEecccCceeeee---cccCCc
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARV--GEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHLDVTTWKQIQTL---PCHQLT  179 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~d~~~~~~~~~~---~~~~~~  179 (312)
                      +.++-|..++..............  ....-....|.++...+++.+. .|+ ..|..+++..+.....-.   ......
T Consensus       330 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~  408 (781)
T 3v9f_A          330 TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNS  408 (781)
T ss_dssp             EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSB
T ss_pred             ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcc
Confidence            767778888876543222111000  0011123568899988887754 455 455555555543322211   123467


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |.++...+++.+ ..|+.++.+..+|..+.+ ...+...    ......|.++...+++.+.+...  +-|..||..+..
T Consensus       409 v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~-~~~~~~~----~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~  480 (781)
T 3v9f_A          409 VLCSLKDSEGNL-WFGTYLGNISYYNTRLKK-FQIIELE----KNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKK  480 (781)
T ss_dssp             EEEEEECTTSCE-EEEETTEEEEEECSSSCE-EEECCST----TTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSS
T ss_pred             eEEEEECCCCCE-EEEeccCCEEEEcCCCCc-EEEeccC----CCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCe
Confidence            899998888764 456777778888876543 2222211    11345688999988888766544  458889876542


Q ss_pred             CCcccccccccceeEEee---ccCcceeEEEeccCCCeEEEE
Q psy15191        260 TEEDLVQNTLWPEVQKLY---GHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ..          ......   .....|.++...++|.+.+..
T Consensus       481 ~~----------~~~~~~~~~~~~~~i~~i~~d~~g~lWigt  512 (781)
T 3v9f_A          481 VI----------HHYDTSNSQLLENFVRSIAQDSEGRFWIGT  512 (781)
T ss_dssp             CC----------EEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred             EE----------ecccCcccccccceeEEEEEcCCCCEEEEE
Confidence            11          111000   113568888888888766655

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.89  E-value=0.0037  Score=49.32  Aligned_cols=118  Identities=11%  Similarity=0.108  Sum_probs=78.4

Q ss_pred             ceeEEEE---CCCCCeEEEeec-------------CCeEEE-ecc---cCceeeeec--c-----------cCCceeEEE
Q psy15191        138 GFYGCKF---GPRGDYIIAHGF-------------QGSLHL-DVT---TWKQIQTLP--C-----------HQLTITQLA  184 (312)
Q Consensus       138 ~v~~~~~---~~~~~~l~~~~~-------------~~~i~~-d~~---~~~~~~~~~--~-----------~~~~v~~~~  184 (312)
                      .+..+.+   .|+++++++...             +..+.. |+.   +++......  .           .......|+
T Consensus        64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva  143 (334)
T 2p9w_A           64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA  143 (334)
T ss_dssp             EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred             eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence            4578888   578666665331             344444 877   676654432  1           113588999


Q ss_pred             ECCCCCEEEEEecC-CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        185 FSPDDTHLVSVSRD-RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       185 ~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ..++|+..++++.. +.|...+.............  .........+.++++|+|..|+.....|.|..+|+..
T Consensus       144 vD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~--~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          144 QDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES--GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             ECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC--CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             ECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC--CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            99999999999888 88887777644322222111  1111334477899999999888887799999999884

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.87  E-value=0.0066  Score=48.99  Aligned_cols=144  Identities=11%  Similarity=-0.053  Sum_probs=82.2

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCeEEE-ecccCceeeeecccCC
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL-DVTTWKQIQTLPCHQL  178 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~~~~~~  178 (312)
                      ++++-...+.|..+++.......+.       .........+++.+.+..|+ +-...+.|.+ ++..............
T Consensus        87 ly~~D~~~~~I~r~~~~g~~~~~~~-------~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~  159 (349)
T 3v64_C           87 VFWSDVTLDRILRANLNGSNVEEVV-------STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE  159 (349)
T ss_dssp             EEEEETTTTEEEEEETTSCSCEEEE-------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS
T ss_pred             EEEEeccCCceEEEecCCCCceEEE-------eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC
Confidence            3444445567777777653321111       11123456789987655554 4445567776 5543322222223335


Q ss_pred             ceeEEEECCCCCEEEEE-ecC-CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE-eccCCeEEEEec
Q psy15191        179 TITQLAFSPDDTHLVSV-SRD-RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT-ISRDGVCVVWGL  255 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~-~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~  255 (312)
                      ....++++|.+..|+.. ... +.|..+++...........       .....+.++++|++..|+. -...+.|..+|+
T Consensus       160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~  232 (349)
T 3v64_C          160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT-------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANL  232 (349)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC-------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence            57899999965555444 344 7888888875443322221       2334678999986665554 456678999997


Q ss_pred             CCC
Q psy15191        256 GEP  258 (312)
Q Consensus       256 ~~~  258 (312)
                      ...
T Consensus       233 dG~  235 (349)
T 3v64_C          233 DGS  235 (349)
T ss_dssp             TSC
T ss_pred             CCC
Confidence            643

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.86  E-value=0.0062  Score=48.37  Aligned_cols=162  Identities=9%  Similarity=-0.125  Sum_probs=91.9

Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-eccc----CceeeeecccCCceeE
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTT----WKQIQTLPCHQLTITQ  182 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~----~~~~~~~~~~~~~v~~  182 (312)
                      ..|+..|+...+...+  .      .....+..++|++.+..|+.+. ..+.|.. ++..    ................
T Consensus        10 ~~I~~i~~~~~~~~~~--~------~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g   81 (316)
T 1ijq_A           10 HEVRKMTLDRSEYTSL--I------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (316)
T ss_dssp             SSEEEEETTSCCCEEE--E------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             CeEEEEECCCcceEeh--h------cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence            5588888876432211  1      1234568899998766555544 4567766 5553    1112222222245678


Q ss_pred             EEECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-C-CeEEEEecCCCC
Q psy15191        183 LAFSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-D-GVCVVWGLGEPP  259 (312)
Q Consensus       183 ~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-g~i~iwd~~~~~  259 (312)
                      +++++.+. .+++-...+.|.++++........+..       .......++++|.+..|+.+.. . +.|...++....
T Consensus        82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~  154 (316)
T 1ijq_A           82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (316)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence            99987544 445556678999999875544333332       2234678999986665544433 3 678888775431


Q ss_pred             CCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191        260 TEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                                   ...+ ...-...+.++++|++..|..+
T Consensus       155 -------------~~~~~~~~~~~P~gla~d~~~~~lY~~  181 (316)
T 1ijq_A          155 -------------IYSLVTENIQWPNGITLDLLSGRLYWV  181 (316)
T ss_dssp             -------------EEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             -------------eEEEEECCCCCceEEEEeccCCEEEEE
Confidence                         1122 1223456788898876655544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.84  E-value=0.0053  Score=46.85  Aligned_cols=125  Identities=12%  Similarity=0.163  Sum_probs=83.0

Q ss_pred             ccCCCccceeEEEECCCCCeEEE-eecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191        131 EVGGNTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       131 ~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  207 (312)
                      .+++-...+..++++|++..|++ ...++.|.. |.. .++...+. ........+++.+++.++++.-.++.+.++++.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            34455567999999998776665 555555555 877 77776664 223567889999998877776677899999987


Q ss_pred             CCCeEEEEeccC--CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        208 SSGRLSLVACSD--KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       208 ~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      ....+.......  ............++|+|.++.|.++.+.....+|.+.
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~  150 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN  150 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence            665422211111  0011144557899999999877777766555666554

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.83  E-value=0.0037  Score=49.38  Aligned_cols=161  Identities=6%  Similarity=0.032  Sum_probs=94.9

Q ss_pred             CccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeee-ecc----c--CCceeEEEE---CCCCCEEEEEec-----
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQT-LPC----H--QLTITQLAF---SPDDTHLVSVSR-----  197 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~~-----  197 (312)
                      ......+++|++....++.++ ..+.|.. +......... +..    .  ...+..|.|   .|+++++++...     
T Consensus        11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~   90 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN   90 (334)
T ss_dssp             TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred             cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence            344456789988655555555 7888877 5553322222 221    1  124689999   688777775432     


Q ss_pred             --------CCeEEEEEcc---CCCeEEEEeccCCCCc------ccceeeEEEEEcCCCceEEEeccC-CeEEEEecCCCC
Q psy15191        198 --------DRRWGLYKRQ---SSGRLSLVACSDKTNG------VHKRIIWGVAWSHDSRYFLTISRD-GVCVVWGLGEPP  259 (312)
Q Consensus       198 --------d~~i~~wd~~---~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~  259 (312)
                              +..+..||+.   +.+.............      ........++..++|+..++++.. +.|...+.....
T Consensus        91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~  170 (334)
T 2p9w_A           91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT  170 (334)
T ss_dssp             TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred             ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence                    6779999998   6666555442110000      011347899999999999988888 876666544321


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      .       ..|-............+.|+++|+|++|+.....+
T Consensus       171 ~-------~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g  206 (334)
T 2p9w_A          171 V-------STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR  206 (334)
T ss_dssp             E-------EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS
T ss_pred             E-------eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC
Confidence            0       00000000011122367999999999888885333

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.82  E-value=0.0092  Score=48.88  Aligned_cols=170  Identities=11%  Similarity=-0.054  Sum_probs=94.8

Q ss_pred             CCcEEEeeecCCcccc-------cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191         74 DKTAILWKYVSEGNYL-------PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG  145 (312)
Q Consensus        74 dg~i~vw~~~~~~~~~-------~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  145 (312)
                      ...|+..++.......       +.-+.+.+ .+.++++-...+.|..+++.......+   .    .........+++.
T Consensus        95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~---~----~~~~~~p~glavd  167 (386)
T 3v65_B           95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV---V----STGLESPGGLAVD  167 (386)
T ss_dssp             BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE---E----CSSCSCCCCEEEE
T ss_pred             CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE---E----eCCCCCccEEEEE
Confidence            3567777776554321       11122232 233444445566777777765321111   1    1112245678888


Q ss_pred             CCCCeEE-EeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe-cC-CeEEEEEccCCCeEEEEeccCCC
Q psy15191        146 PRGDYII-AHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RD-RRWGLYKRQSSGRLSLVACSDKT  221 (312)
Q Consensus       146 ~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~wd~~~~~~~~~~~~~~~~  221 (312)
                      +.+..|+ +-...+.|.+ ++..................++++|.+..|+... .. +.|..+++...........    
T Consensus       168 ~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~----  243 (386)
T 3v65_B          168 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT----  243 (386)
T ss_dssp             TTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS----
T ss_pred             eCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC----
Confidence            7655554 4445667777 5543322222223335678999998666555443 34 6788888875544433322    


Q ss_pred             CcccceeeEEEEEcCCCceEE-EeccCCeEEEEecCC
Q psy15191        222 NGVHKRIIWGVAWSHDSRYFL-TISRDGVCVVWGLGE  257 (312)
Q Consensus       222 ~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~  257 (312)
                         .....+.++++|++..|+ +-+..+.|..+|+..
T Consensus       244 ---~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG  277 (386)
T 3v65_B          244 ---HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  277 (386)
T ss_dssp             ---SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred             ---CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence               223467899998666554 445667899998764

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.77  E-value=0.011  Score=48.56  Aligned_cols=166  Identities=8%  Similarity=-0.134  Sum_probs=96.9

Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-eccc----CceeeeecccCCc
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTT----WKQIQTLPCHQLT  179 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~----~~~~~~~~~~~~~  179 (312)
                      +....|+..++.......+.        .....+..++|++.+..|+.+. ..+.|+. ++..    .............
T Consensus        89 ~~~~~I~~i~l~~~~~~~~~--------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~  160 (400)
T 3p5b_L           89 TNRHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  160 (400)
T ss_dssp             EETTEEEEECTTSCSCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred             eccceeEEEccCCcceeEec--------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence            34477888888764322211        2334578999998766665554 4566655 5443    1122222223446


Q ss_pred             eeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec--cCCeEEEEecC
Q psy15191        180 ITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS--RDGVCVVWGLG  256 (312)
Q Consensus       180 v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~  256 (312)
                      ...+++.+ .++++++-...+.|.+.++........+..       .......++++|.+.+|+.+.  ..+.|...++.
T Consensus       161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d  233 (400)
T 3p5b_L          161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  233 (400)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred             cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence            77899988 455555556678899999886554444432       223467899999666555443  24678888876


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ....            ...+...-...+.|++++++..|..+
T Consensus       234 G~~~------------~~~~~~~l~~P~glavd~~~~~lY~a  263 (400)
T 3p5b_L          234 GVDI------------YSLVTENIQWPNGITLDLLSGRLYWV  263 (400)
T ss_dssp             SCSC------------EEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             CCcc------------EEEEECCCCceEEEEEEeCCCEEEEE
Confidence            4321            11112222456788888776655555

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.77  E-value=0.0094  Score=47.52  Aligned_cols=187  Identities=13%  Similarity=0.240  Sum_probs=102.9

Q ss_pred             CceEEEecCCCcEEEeeecCCcccccccc-cC-----CC----CCc---eEEEEe-C--CCcEEEEcCCCCcceeeeeee
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYLPYHM-RD-----DS----KQL---HLLSCS-M--DKSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~~-----~~----~~~---~l~~~~-~--d~~i~i~d~~~~~~~~~~~~~  128 (312)
                      ..+++.....+-+.+||+ .++.+...-. ..     -+    .+.   ++++.. .  +++|.+|++...... +....
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~  117 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT  117 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc
Confidence            455666667788999999 4443211100 00     00    011   223333 3  578999976432222 11111


Q ss_pred             ec--ccCCCccceeEEEE--CCC-CC-eEEEeecCCeEEE-ec-------ccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        129 VG--EVGGNTLGFYGCKF--GPR-GD-YIIAHGFQGSLHL-DV-------TTWKQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       129 ~~--~~~~~~~~v~~~~~--~~~-~~-~l~~~~~~~~i~~-d~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      ..  .+......++.+++  +|. ++ ++++...+|.+.. ++       .+.++++.+. ..+.+..+...+....|+.
T Consensus       118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv  196 (355)
T 3amr_A          118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYI  196 (355)
T ss_dssp             CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred             ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEE
Confidence            00  00011255677888  774 44 5777788888766 32       2334455555 3467888999998889999


Q ss_pred             EecCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEE--cCCCc-eEEEec-cCCeEEEEecC
Q psy15191        195 VSRDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAW--SHDSR-YFLTIS-RDGVCVVWGLG  256 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~s~~-~dg~i~iwd~~  256 (312)
                      +-++..|..++.+...  ....+......  .....+..|++  .++++ ||++++ .++...+||..
T Consensus       197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g--~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          197 AEEDEAIWKFSAEPDGGSNGTVIDRADGR--HLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             EETTTEEEEEECSTTSCSCCEEEEEBSSS--SBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             ecccceEEEEeCCcCCCCCceEEEEecCC--ccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            9999777777755221  11112111000  02234777777  45555 555555 67799999986

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.74  E-value=0.0031  Score=46.49  Aligned_cols=146  Identities=12%  Similarity=-0.001  Sum_probs=78.0

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCcee------eeec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI------QTLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~------~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      .+..++|+|+|.+.++  .+|.+.- +..+....      ..+-  +-. ....+.|.|+|.+.++  .||.|+-++-.+
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            5679999999986666  7777666 43321110      1110  111 1478999999987776  669888776532


Q ss_pred             CCeEEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec--cCcceeE
Q psy15191        209 SGRLSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG--HGYEIYS  285 (312)
Q Consensus       209 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~  285 (312)
                      ...-.-+... ..... --..+..|.+.|+|.+.+..  |+.++-.......       ...|.......+  .-..-+.
T Consensus       117 ~~~~~Wl~~a-~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~-------~~~wl~~~~~~g~~g~~~yr~  186 (236)
T 1tl2_A          117 SDTDNWIARA-TEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN-------QDNWLARATKIGQGGWDTFKF  186 (236)
T ss_dssp             STTCCHHHHS-EEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST-------TCCHHHHCEEEESSSGGGEEE
T ss_pred             CCCCceeccc-cEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC-------CcccccccceeccCCcceEEE
Confidence            2111000000 00000 11357899999999988776  7775433222111       111211222222  2223445


Q ss_pred             EEeccCCCeEEEE
Q psy15191        286 LAASHDGTLLASA  298 (312)
Q Consensus       286 ~~~s~~~~~l~s~  298 (312)
                      +.|.++|.+.+..
T Consensus       187 l~f~~~G~l~~v~  199 (236)
T 1tl2_A          187 LFFSSVGTLFGVQ  199 (236)
T ss_dssp             EEECTTSCEEEEE
T ss_pred             EEECCCCcEEEEe
Confidence            6788988776665

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.64  E-value=0.0013  Score=58.41  Aligned_cols=207  Identities=8%  Similarity=-0.065  Sum_probs=107.8

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----Ccccc--------cccccCC-CCC
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----EGNYL--------PYHMRDD-SKQ   99 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----~~~~~--------~~~~~~~-~~~   99 (312)
                      +.++.+....+.. ...+..++|.+.     ++.++++-...+.|+.+++..    .....        +.-+... ..+
T Consensus       392 d~~~~~~~~~~~~-~~~p~gla~d~~-----~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g  465 (699)
T 1n7d_A          392 TLDRSEYTSLIPN-LRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS  465 (699)
T ss_dssp             CTTSCCEECCSCC-CTTCCCCEEETT-----TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSS
T ss_pred             eCCCCcceeeecc-CcceEEEccccc-----cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCC
Confidence            3444433333332 345668888875     134445545567899988875    12111        1111222 233


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-C-CeEEE-ecccCceeeeeccc
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-Q-GSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-~~i~~-d~~~~~~~~~~~~~  176 (312)
                      .++++-...+.|.++++.......+.       .........++++|.+.+|+.+.. . +.|.. ++..-.........
T Consensus       466 ~LY~tD~~~~~I~v~d~dg~~~~~l~-------~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~  538 (699)
T 1n7d_A          466 NIYWTDSVLGTVSVADTKGVKRKTLF-------REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN  538 (699)
T ss_dssp             BCEECCTTTSCEEEEBSSSCCEEEEC-------CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS
T ss_pred             cEEEEeccCCeEEEEecCCCceEEEE-------eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC
Confidence            34444455677888887653221111       111234577899997665555443 2 56665 43321111111112


Q ss_pred             CCceeEEEECCCCCEEE-EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        177 QLTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      -...+.|+|+|++..|+ +-+..+.|..+++........+....     ......+|++..+ .++++....+.|..++.
T Consensus       539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~-----~~~~P~glavd~~-~lywtd~~~~~V~~~d~  612 (699)
T 1n7d_A          539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFED-KVFWTDIINEAIFSANR  612 (699)
T ss_dssp             CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS-----SCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred             CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCC-----cCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence            23457899998755554 44566789999987544433332111     1112334555543 45556666778999986


Q ss_pred             CCC
Q psy15191        256 GEP  258 (312)
Q Consensus       256 ~~~  258 (312)
                      .++
T Consensus       613 ~~G  615 (699)
T 1n7d_A          613 LTG  615 (699)
T ss_dssp             TTE
T ss_pred             cCC
Confidence            554

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.63  E-value=0.017  Score=46.57  Aligned_cols=206  Identities=9%  Similarity=-0.090  Sum_probs=116.5

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc--------cccCCC-CCceEE
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY--------HMRDDS-KQLHLL  103 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--------~~~~~~-~~~~l~  103 (312)
                      ++++......+.+ ...+..++|.+.     ++.++++-...+.|..+++.......+.        -+...+ .+.+++
T Consensus        59 ~~~g~~~~~~~~~-~~~~~~l~~d~~-----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~  132 (349)
T 3v64_C           59 LPHRSEYTLLLNN-LENAIALDFHHR-----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW  132 (349)
T ss_dssp             CTTSCCEEEEECS-CSCEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred             eCCCCeeEEeecC-CCceEEEEEecc-----ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEE
Confidence            4544444444443 345789999875     2455566666788999988765432211        111122 233444


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-C-CeEEE-ecccCceeeeecccCCce
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-Q-GSLHL-DVTTWKQIQTLPCHQLTI  180 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-~~i~~-d~~~~~~~~~~~~~~~~v  180 (312)
                      +-...+.|.+.+++......+.       .........++++|.+..|+.... . +.|.. ++..-.........-...
T Consensus       133 ~d~~~~~I~~~~~dG~~~~~l~-------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P  205 (349)
T 3v64_C          133 TDSGTSRIEVANLDGAHRKVLL-------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP  205 (349)
T ss_dssp             EETTTTEEEEEETTSCSCEEEE-------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCE
T ss_pred             EcCCCCeEEEEcCCCCceEEEE-------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCc
Confidence            4455667777777643211111       122345688999997666665543 3 55655 544322222122223456


Q ss_pred             eEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        181 TQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +.|+++|++..|+.+ ...+.|..+|+........+..       ......++++ ..+.++++-...+.|..++..++.
T Consensus       206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~  277 (349)
T 3v64_C          206 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK  277 (349)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred             ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC-------CCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence            899999866666555 4567899999876444333332       1223556777 355666666677888888855543

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.60  E-value=0.019  Score=46.36  Aligned_cols=65  Identities=11%  Similarity=0.043  Sum_probs=40.2

Q ss_pred             eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ....++| .+|.++++.-..+.|...++.........      .....+......+.++++.|||.++++..
T Consensus       269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~------~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRV------LRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEE------EEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceee------cchheecccCCCeeEEEECCCCcEEEEEe
Confidence            4567777 46777777777788888877643210000      00112222235789999999998887764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.56  E-value=0.019  Score=45.57  Aligned_cols=193  Identities=8%  Similarity=-0.052  Sum_probs=110.5

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-c--------ccccCC-CCCceEEEEeCCCcEEEEcCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-P--------YHMRDD-SKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-~--------~~~~~~-~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      ..+..+.|.+.     ++.++.+-...+.|..+++....... +        .-+... ..+.++++-...+.|.+++++
T Consensus        35 ~~~~~ld~d~~-----~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d  109 (318)
T 3sov_A           35 EDAAAVDFVFS-----HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD  109 (318)
T ss_dssp             EEEEEEEEEGG-----GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CccEEEEEEeC-----CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECC
Confidence            35678899885     24556666677889888887653211 1        111112 133344444556677788776


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      ......+.       .........+++.|.+..|+.+..  .+.|.. ++..-.........-...+.|+++|++..|+.
T Consensus       110 G~~~~~l~-------~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~  182 (318)
T 3sov_A          110 GSLRKVLF-------WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW  182 (318)
T ss_dssp             SCSCEEEE-------CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred             CCcEEEEE-------eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEE
Confidence            43221111       122345688999987666666552  456665 54422211112222345689999997666655


Q ss_pred             E-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        195 V-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       195 ~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      + +..+.|..+|+...........       ......++++. .+.++.+-...+.|..++..++..
T Consensus       183 aD~~~~~I~~~d~dG~~~~~~~~~-------~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~  241 (318)
T 3sov_A          183 ADAKLNFIHKSNLDGTNRQAVVKG-------SLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEG  241 (318)
T ss_dssp             EETTTTEEEEEETTSCSCEEEECS-------CCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred             EECCCCEEEEEcCCCCceEEEecC-------CCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCc
Confidence            5 4568899999875444333321       12234567775 345556666778899998866643

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.55  E-value=0.02  Score=45.60  Aligned_cols=180  Identities=11%  Similarity=0.152  Sum_probs=100.9

Q ss_pred             cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC----CCCe--EEEee-c---CCeEEE-
Q psy15191         94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP----RGDY--IIAHG-F---QGSLHL-  162 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~~~~-~---~~~i~~-  162 (312)
                      +..+...+++.....+-+.+||+..   ..+....     .  ..++.+..-|    .++.  ++.++ .   ++.+.+ 
T Consensus        35 ~~dp~~s~ii~t~k~~gL~Vydl~G---~~l~~~~-----~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf  104 (355)
T 3amr_A           35 PKTPQNSKLITTNKKSGLVVYSLDG---KMLHSYN-----T--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY  104 (355)
T ss_dssp             SSCGGGCEEEEEETTTEEEEEETTS---CEEEEEC-----C--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred             CCCCCccEEEEEcCCCCEEEEcCCC---cEEEEcc-----C--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence            3345555777777888999999943   3333322     1  2344444433    2222  33333 3   456777 


Q ss_pred             ec--ccCceeeeecc------cC-CceeEEEE--CCC-CC-EEEEEecCCeEEEEEccC-------CCeEEEEeccCCCC
Q psy15191        163 DV--TTWKQIQTLPC------HQ-LTITQLAF--SPD-DT-HLVSVSRDRRWGLYKRQS-------SGRLSLVACSDKTN  222 (312)
Q Consensus       163 d~--~~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~~wd~~~-------~~~~~~~~~~~~~~  222 (312)
                      ++  .+.. ......      .. ..+..+++  +|. +. ++++...+|.+..|++..       .+.+..+.      
T Consensus       105 ~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~------  177 (355)
T 3amr_A          105 AIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK------  177 (355)
T ss_dssp             EECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE------
T ss_pred             EECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec------
Confidence            33  3332 222211      11 56677888  774 43 677888899999999843       22333443      


Q ss_pred             cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-cc-CcceeEEEe--ccCCC-eEEE
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GH-GYEIYSLAA--SHDGT-LLAS  297 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~--s~~~~-~l~s  297 (312)
                        ....+..++..+....|+.+-++.-|..++.+......       .+.+..+. ++ ...+..|++  .++++ +|++
T Consensus       178 --lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~-------~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv  248 (355)
T 3amr_A          178 --MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSN-------GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA  248 (355)
T ss_dssp             --CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSC-------CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred             --CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCC-------ceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence              33457788899988899999988766666644322110       01233331 22 235777777  56665 6666


Q ss_pred             Ee
Q psy15191        298 AC  299 (312)
Q Consensus       298 ~s  299 (312)
                      ++
T Consensus       249 Ss  250 (355)
T 3amr_A          249 SS  250 (355)
T ss_dssp             EE
T ss_pred             Ec
Confidence            65

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.54  E-value=0.0069  Score=49.44  Aligned_cols=116  Identities=12%  Similarity=0.149  Sum_probs=74.2

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEEecc--cCcee----------eeec-c-----cCCceeEEEECC---CCCEEEEEe
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHLDVT--TWKQI----------QTLP-C-----HQLTITQLAFSP---DDTHLVSVS  196 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~--~~~~~----------~~~~-~-----~~~~v~~~~~~~---~~~~l~~~~  196 (312)
                      .+..+..+|+|++|+..+..+...+.+.  .+...          ..+. +     ...+|..+.|+|   .+..|++-.
T Consensus        67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt  146 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK  146 (452)
T ss_dssp             TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence            4677999999999998876654433333  11111          0111 1     256799999999   456899999


Q ss_pred             cCCeEEEEEccCCCe-EEEEeccCCC--CcccceeeEEEEEcCCCceEEE--eccCCeEEEE
Q psy15191        197 RDRRWGLYKRQSSGR-LSLVACSDKT--NGVHKRIIWGVAWSHDSRYFLT--ISRDGVCVVW  253 (312)
Q Consensus       197 ~d~~i~~wd~~~~~~-~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iw  253 (312)
                      .|+.|++||+..... ...+......  .......|.+++|.+++-.|..  .+..|.|+-.
T Consensus       147 sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          147 EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence            999999999986221 1122211100  0012366889999998876666  4488888755

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.54  E-value=0.025  Score=46.23  Aligned_cols=148  Identities=14%  Similarity=0.060  Sum_probs=85.9

Q ss_pred             CCCCeEEEeecCCeEEE-ecccCceeeeecc----cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC----------
Q psy15191        146 PRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG----------  210 (312)
Q Consensus       146 ~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----------  210 (312)
                      .++..++.+ .++.||+ ++.....-+.+..    .-..+..+..+|+|++|+..+ +..|.|-.+....          
T Consensus        30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred             cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence            445444443 3467777 4442211222221    123678899999999998875 5678888887321          


Q ss_pred             --eEEEEeccCCCCcccceeeEEEEEcCCC---ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191        211 --RLSLVACSDKTNGVHKRIIWGVAWSHDS---RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS  285 (312)
Q Consensus       211 --~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  285 (312)
                        ....+..... ......+|..+.|+|-+   ..|++-..|+.|++||+.......... .+.. ....+......|.+
T Consensus       108 ~~q~~ty~l~~~-~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L-~k~~-~~fg~d~~~~ev~S  184 (452)
T 3pbp_A          108 AFQIFHYSIDEE-EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVL-NKPN-NSFGLDARVNDITD  184 (452)
T ss_dssp             TTEEEEEEGGGC-C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEE-SCCC-SEEESCSSCCCEEE
T ss_pred             ccceeEEEcCCc-ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcch-hccc-cccCCCcccceEEE
Confidence              1112222111 11135679999999954   579999999999999998743211100 0000 11122233467889


Q ss_pred             EEeccCCCeEEEE
Q psy15191        286 LAASHDGTLLASA  298 (312)
Q Consensus       286 ~~~s~~~~~l~s~  298 (312)
                      ++|.+++-.|-..
T Consensus       185 ~~Fg~~~lTLYvl  197 (452)
T 3pbp_A          185 LEFSKDGLTLYCL  197 (452)
T ss_dssp             EEECTTSSCEEEE
T ss_pred             EEEcCCCcEEEEE
Confidence            9999988666554

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.53  E-value=0.015  Score=49.03  Aligned_cols=152  Identities=13%  Similarity=0.129  Sum_probs=85.9

Q ss_pred             ceeEEEECC-CCCeEEEeec-CCeEEE-ecccCceeeeecc---cCCceeEEEE-------CCCCCEEEEEecCC-----
Q psy15191        138 GFYGCKFGP-RGDYIIAHGF-QGSLHL-DVTTWKQIQTLPC---HQLTITQLAF-------SPDDTHLVSVSRDR-----  199 (312)
Q Consensus       138 ~v~~~~~~~-~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~-----  199 (312)
                      ....|+|+| +...|+++.. .+.|++ |.++..+......   .......++|       ++++++|+.+...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            467899998 3555555544 355665 8887666654432   2235889999       99999666665543     


Q ss_pred             --eEEEEEccCCCeE------EEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecC-------CCCCCcc
Q psy15191        200 --RWGLYKRQSSGRL------SLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLG-------EPPTEED  263 (312)
Q Consensus       200 --~i~~wd~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-------~~~~~~~  263 (312)
                        .|.+++.......      ..+.        .......++++|+ +.++++-..++.|+.+|+.       ++.....
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~--------~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp  291 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIA--------AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP  291 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEE--------EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred             CceEEEEecCCCCceeecccceeec--------cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence              2666664331111      1221        1112456889995 5555666788899999987       4321000


Q ss_pred             ccccc--ccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        264 LVQNT--LWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       264 ~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      .....  ..+.+..+ +.....+.++|+|+|++|..+
T Consensus       292 ~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYva  327 (496)
T 3kya_A          292 IVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFG  327 (496)
T ss_dssp             BGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEE
T ss_pred             cccccccccceeEec-CCCCCceEEEEcCCCCEEEEE
Confidence            00000  00012222 223456789999999954444

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.48  E-value=0.031  Score=45.95  Aligned_cols=209  Identities=7%  Similarity=-0.082  Sum_probs=115.7

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----cccc--------ccccCCC-CC
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----NYLP--------YHMRDDS-KQ   99 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~~~~--------~~~~~~~-~~   99 (312)
                      +.++......+. ....+..++|.+.     ++.++++-...+.|+.+++....    ...+        .-+.... .+
T Consensus        98 ~l~~~~~~~~~~-~~~~~~~l~~d~~-----~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~  171 (400)
T 3p5b_L           98 TLDRSEYTSLIP-NLRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS  171 (400)
T ss_dssp             CTTSCSCEEEEC-SCSCEEEEEEETT-----TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTT
T ss_pred             ccCCcceeEecc-ccCcceEEeeeec-----cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCC
Confidence            344443333333 3467889999985     24555665667888888886522    1111        1111122 23


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeeccc
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCH  176 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~  176 (312)
                      .++++-...+.|.+.+++......+..       .....+..++++|.+..|+....  .+.|.. ++..-.........
T Consensus       172 ~lY~~d~~~~~I~~~~~~g~~~~~l~~-------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~  244 (400)
T 3p5b_L          172 NIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN  244 (400)
T ss_dssp             EEEEEETTTTEEEEECTTTCSEEEEEE-------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS
T ss_pred             ceEEEECCCCeEEEEeCCCCceEEEEe-------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC
Confidence            344444556677777776532211111       12334688999997766665542  355665 55432222222223


Q ss_pred             CCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191        177 QLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL  255 (312)
Q Consensus       177 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  255 (312)
                      -...+.|++++++..|+.+. ..+.|..+|+.............     ......++++. .+.++.+-...+.|..+|.
T Consensus       245 l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~-----~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~  318 (400)
T 3p5b_L          245 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVF-EDKVFWTDIINEAIFSANR  318 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS-----TTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC-----CCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence            35678999998777666654 56789999988655444443211     11224466663 4455666667778988886


Q ss_pred             CCCCC
Q psy15191        256 GEPPT  260 (312)
Q Consensus       256 ~~~~~  260 (312)
                      .++..
T Consensus       319 ~~G~~  323 (400)
T 3p5b_L          319 LTGSD  323 (400)
T ss_dssp             SSCCC
T ss_pred             CCCCc
Confidence            66543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.48  E-value=0.024  Score=44.48  Aligned_cols=212  Identities=10%  Similarity=0.047  Sum_probs=102.8

Q ss_pred             CceEEEec-CC-----CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcc-eee
Q psy15191         65 HKDLVSCS-LD-----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTG-LWL  124 (312)
Q Consensus        65 ~~~l~s~~-~d-----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~-~~~  124 (312)
                      +.+++.|+ .+     ..+.+||..+.+...+...+.        ..++..++.|+.+     ..+.+||+.+.+. .+.
T Consensus        15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~   94 (301)
T 2vpj_A           15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWY   94 (301)
T ss_dssp             EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCE
T ss_pred             CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeE
Confidence            45666666 33     357778876655322111111        1134456666654     4588888887541 022


Q ss_pred             eeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191        125 ETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       125 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ...   .++........+.+  +++.++.|+.++     .+.+ |+  .+|...............+.+  +++.++.|+
T Consensus        95 ~~~---~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG  167 (301)
T 2vpj_A           95 SVA---PMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG  167 (301)
T ss_dssp             EEC---CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred             ECC---CCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence            221   11122222222222  567777776543     3444 54  446555444322222222222  677777777


Q ss_pred             cC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCccccc
Q psy15191        197 RD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       197 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~  266 (312)
                      .+     ..+.+||+.+.+-. .+.....    .......+.+  ++++++.|+.+     ..+.+||+.+.        
T Consensus       168 ~~~~~~~~~~~~~d~~~~~W~-~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~--------  232 (301)
T 2vpj_A          168 YDGLNILNSVEKYDPHTGHWT-NVTPMAT----KRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD--------  232 (301)
T ss_dssp             BCSSCBCCCEEEEETTTTEEE-EECCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--------
T ss_pred             CCCCcccceEEEEeCCCCcEE-eCCCCCc----ccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC--------
Confidence            55     45889998765432 2221111    1111122222  67777888764     36888988654        


Q ss_pred             ccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                        .|..+..+.........+  ..++++++.|+.++
T Consensus       233 --~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~  264 (301)
T 2vpj_A          233 --SWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDG  264 (301)
T ss_dssp             --EEEEECCCSSCCBSCEEE--EETTEEEEECCBCS
T ss_pred             --cEEECCCCCCcccceeEE--EECCEEEEEcCcCC
Confidence              233333222211111222  23677888887654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.43  E-value=0.013  Score=47.35  Aligned_cols=105  Identities=13%  Similarity=0.161  Sum_probs=58.8

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec---ccCCceeEEEECCC---CCEEEEEec-C-----CeEEEE
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP---CHQLTITQLAFSPD---DTHLVSVSR-D-----RRWGLY  204 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~~w  204 (312)
                      ....++|.|+|+++ ++...|.|.+ +..+.+....+.   ........|+++|+   +..|+.+.. .     +.|..+
T Consensus        32 ~P~~ia~~pdG~l~-V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~  110 (352)
T 2ism_A           32 VPWALAFLPDGGML-IAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL  110 (352)
T ss_dssp             CEEEEEECTTSCEE-EEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred             CceEEEEcCCCeEE-EEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence            46789999999854 4556688877 511111111111   12356789999998   445554433 2     678888


Q ss_pred             EccCCCe---EEEEeccCC-CCcccceeeEEEEEcCCCceEEEec
Q psy15191        205 KRQSSGR---LSLVACSDK-TNGVHKRIIWGVAWSHDSRYFLTIS  245 (312)
Q Consensus       205 d~~~~~~---~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~  245 (312)
                      +......   ...+..... ....|.  ...++|.|+|.+.++.+
T Consensus       111 ~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          111 RHLGERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EECSSCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSCEEEECC
T ss_pred             EeCCCCcCceEEEEEeCCCCCCCCcC--CceEEECCCCCEEEEEC
Confidence            8764321   111221110 011122  35799999998777654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.42  E-value=0.064  Score=48.22  Aligned_cols=165  Identities=8%  Similarity=-0.131  Sum_probs=92.8

Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE-ecccC----ceeeeecccCCc
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL-DVTTW----KQIQTLPCHQLT  179 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~~~----~~~~~~~~~~~~  179 (312)
                      +....|+..++.......+.        .....+..++|++....|+.. ...+.|+. ++...    .....+......
T Consensus       401 an~~~Ir~i~l~~~~~~~l~--------~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~  472 (791)
T 3m0c_C          401 TNRHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  472 (791)
T ss_dssp             ECBSSEEEECTTSCCCEEEE--------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             ccccceeEeeccCCcceeee--------cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCC
Confidence            34456777777653321111        123456789999865555544 44566655 44431    112222223345


Q ss_pred             eeEEEECCCCCE-EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-c-CCeEEEEecC
Q psy15191        180 ITQLAFSPDDTH-LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-R-DGVCVVWGLG  256 (312)
Q Consensus       180 v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~-dg~i~iwd~~  256 (312)
                      ...|++.+.++. +++-...+.|.+.++........+..       ......+|+++|.+.+|+.+. . .+.|.+.++.
T Consensus       473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~-------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d  545 (791)
T 3m0c_C          473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  545 (791)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC-------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence            678999886654 44555678999999986555444432       223477899999765555443 2 3678888876


Q ss_pred             CCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191        257 EPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ...             ...+ ...-...+.|++++.+..|..+
T Consensus       546 G~~-------------~~~lv~~~l~~P~GLavD~~~~~LYwa  575 (791)
T 3m0c_C          546 GVD-------------IYSLVTENIQWPNGITLDLLSGRLYWV  575 (791)
T ss_dssp             SCC-------------EEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             CCc-------------eEEEEeCCCCCceEEEEecCCCeEEEE
Confidence            432             1222 2222456778887665555444

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.42  E-value=0.032  Score=44.69  Aligned_cols=243  Identities=12%  Similarity=-0.009  Sum_probs=117.0

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------------ccccCCCC---CceEE
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------------YHMRDDSK---QLHLL  103 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------------~~~~~~~~---~~~l~  103 (312)
                      ..+...-...+.|+|.|+      |.++++--..|.|++++...+....+              .-+..+|+   +..|.
T Consensus        25 ~~va~gL~~P~~ia~~pd------G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lY   98 (347)
T 3das_A           25 RTVATGLNSPWGLAPLPG------GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVY   98 (347)
T ss_dssp             EEEECCCSSEEEEEECTT------SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEE
T ss_pred             EEeecCCCCceEEEEcCC------CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEE
Confidence            344444567889999998      88777766588998887654432111              11122331   12232


Q ss_pred             EE---eCCCcEEEEcCCCCc-----ceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--------------CCeEE
Q psy15191        104 SC---SMDKSIIVWAPDPTT-----GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--------------QGSLH  161 (312)
Q Consensus       104 ~~---~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~~i~  161 (312)
                      ..   ..++.|.-|.+....     ......+..............|+|.|+|.++++.+.              .+.++
T Consensus        99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlR  178 (347)
T 3das_A           99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILR  178 (347)
T ss_dssp             EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred             EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEE
Confidence            22   133445555444311     000000000000112223467999999987777542              23455


Q ss_pred             EecccC--------ceeeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEE--EEecc----C--CCC--
Q psy15191        162 LDVTTW--------KQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLS--LVACS----D--KTN--  222 (312)
Q Consensus       162 ~d~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~--~~~~~----~--~~~--  222 (312)
                      ++...-        +...-..+|. ....++|+|+|.++++= +.|+.=.|--+..+...-  .....    .  ...  
T Consensus       179 i~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~  257 (347)
T 3das_A          179 MTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ  257 (347)
T ss_dssp             ECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred             EeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence            533211        0111111443 35678999988755543 223322222222211100  00000    0  000  


Q ss_pred             cccc-eeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        223 GVHK-RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       223 ~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                      ..+. .....++|. ++.+++..-..+.|....+.......        +....+.+....+.+|+..|||.++++..
T Consensus       258 ~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~--------~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          258 WSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAA--------DPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             ECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESS--------CCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             cCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceec--------ceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            0011 245677776 46666666666667666665432100        01222334456899999999998877754

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.38  E-value=0.037  Score=44.49  Aligned_cols=172  Identities=8%  Similarity=0.030  Sum_probs=93.1

Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecc--cCCCccceeEEEECC--CCC-eEEEeec---CCeEEE---ecccC--ceeeee
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGE--VGGNTLGFYGCKFGP--RGD-YIIAHGF---QGSLHL---DVTTW--KQIQTL  173 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~--~~~-~l~~~~~---~~~i~~---d~~~~--~~~~~~  173 (312)
                      .+|.|.++|+++...... ......  +.........+.+.+  ++. +|+++..   +..+.+   +....  .....+
T Consensus        81 ~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~  159 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI  159 (355)
T ss_dssp             -CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred             CCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence            567788888874322211 122111  122334566777755  344 3444432   334444   33222  222223


Q ss_pred             cc-cCCceeEEEECCCCCEEEEEec-----------------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc
Q psy15191        174 PC-HQLTITQLAFSPDDTHLVSVSR-----------------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS  235 (312)
Q Consensus       174 ~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  235 (312)
                      .+ .-...+.+.+.++|.+.++...                 .|.|+.+|.  .+......        .-...+.++|+
T Consensus       160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~--------~l~~pNGia~s  229 (355)
T 3sre_A          160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE--------GFDFANGINIS  229 (355)
T ss_dssp             CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE--------EESSEEEEEEC
T ss_pred             ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec--------CCcccCcceEC
Confidence            22 2345789999999987776541                 244555544  22222222        22346789999


Q ss_pred             CCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEEEe
Q psy15191        236 HDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASAC  299 (312)
Q Consensus       236 ~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s  299 (312)
                      ||++.|+.+ +..+.|+.|++.......         ....+ ...+..-.++..+ +|++.+++.
T Consensus       230 pDg~~lYvadt~~~~I~~~~~~~~g~l~---------~~~~~-~~~g~PDGi~vD~e~G~lwva~~  285 (355)
T 3sre_A          230 PDGKYVYIAELLAHKIHVYEKHANWTLT---------PLRVL-SFDTLVDNISVDPVTGDLWVGCH  285 (355)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSCEE---------EEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred             CCCCEEEEEeCCCCeEEEEEECCCCcEe---------cCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence            999877655 467899999987432110         11122 2245567888998 599888764

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.37  E-value=0.046  Score=45.47  Aligned_cols=216  Identities=11%  Similarity=-0.017  Sum_probs=116.5

Q ss_pred             CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---Cc-EEEeeecCCcc--------ccccc
Q psy15191         25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KT-AILWKYVSEGN--------YLPYH   92 (312)
Q Consensus        25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~-i~vw~~~~~~~--------~~~~~   92 (312)
                      ..|..  +++.+++.... .........+++.++      ++++++....   .. +...+......        .....
T Consensus       162 ~~I~~--id~~~g~v~~~-~~~~~~P~giavd~d------G~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~g  232 (433)
T 4hw6_A          162 DAFRH--VDFVNQYVDIK-TTNIGQCADVNFTLN------GDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKT  232 (433)
T ss_dssp             SCEEE--EETTTTEEEEE-CCCCSCEEEEEECTT------CCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCC
T ss_pred             CCEEE--EECCCCEEEEe-ecCCCCccEEEECCC------CCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCE
Confidence            44533  56666655444 334566889999988      7755554321   11 22233222111        01112


Q ss_pred             ccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecc--cC
Q psy15191         93 MRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVT--TW  167 (312)
Q Consensus        93 ~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~--~~  167 (312)
                      ...++ ++.++++-..++.|+.++..++.... .....    +.......++++|+++.|+.+. ..+.|.. +..  +.
T Consensus       233 iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~----~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~  307 (433)
T 4hw6_A          233 CAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMM----DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG  307 (433)
T ss_dssp             CEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEEC----SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred             EEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEecc----CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence            22344 45455555567789999887543211 11111    1112234699999999666554 4556665 432  22


Q ss_pred             cee--eeecc---------------cCCceeEEEE---------CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC-
Q psy15191        168 KQI--QTLPC---------------HQLTITQLAF---------SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK-  220 (312)
Q Consensus       168 ~~~--~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-  220 (312)
                      .+.  ..+.+               .-.....+++         .++++++++-..++.|+.++.. + .+..+.+... 
T Consensus       308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G-~v~t~~G~g~~  385 (433)
T 4hw6_A          308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-G-RVTTYAGRGNS  385 (433)
T ss_dssp             CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-S-EEEEEECCCTT
T ss_pred             ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-C-CEEEEEeCCCC
Confidence            211  11111               1123567899         7788777776777889999853 3 4444433211 


Q ss_pred             --C--------CcccceeeEEEEEc-CCCceEEEeccCCeEEEEecC
Q psy15191        221 --T--------NGVHKRIIWGVAWS-HDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       221 --~--------~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~  256 (312)
                        .        ....-.....++++ +++.++++=...+.|+.++++
T Consensus       386 ~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          386 REWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             CSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence              0        00012346789999 677777777777888888764

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.36  E-value=0.051  Score=45.76  Aligned_cols=196  Identities=7%  Similarity=-0.032  Sum_probs=100.2

Q ss_pred             cEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------cccccC-------CCCCceEEEEeCCC
Q psy15191         49 KVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------PYHMRD-------DSKQLHLLSCSMDK  109 (312)
Q Consensus        49 ~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------~~~~~~-------~~~~~~l~~~~~d~  109 (312)
                      ....|+|.| +     +++++++....+.|++.|+..+....           +..+.+       ++++..|+++...+
T Consensus       140 ~p~~la~dp~~-----~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~  214 (496)
T 3kya_A          140 DNGRLAFDPLN-----KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD  214 (496)
T ss_dssp             SEEEEEEETTE-----EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred             CCCEEEEccCC-----CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence            356788887 3     13444444444678888877655421           222223       55565455554433


Q ss_pred             -------cEEEEcCCCCcceeee-e--eeecccCCCccceeEEEECCCCCe-EEEeecCCeEEE-ecc-------cCce-
Q psy15191        110 -------SIIVWAPDPTTGLWLE-T--ARVGEVGGNTLGFYGCKFGPRGDY-IIAHGFQGSLHL-DVT-------TWKQ-  169 (312)
Q Consensus       110 -------~i~i~d~~~~~~~~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~-------~~~~-  169 (312)
                             .|.+++... .+.... .  .....    -.....++++|++.. +++-..++.|.. |+.       +... 
T Consensus       215 ~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~  289 (496)
T 3kya_A          215 GKGDESPSVYIIKRNA-DGTFDDRSDIQLIAA----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW  289 (496)
T ss_dssp             TTGGGEEEEEEEECCT-TSCCSTTSCEEEEEE----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC
T ss_pred             CCcccCceEEEEecCC-CCceeecccceeecc----CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee
Confidence                   255554322 011110 0  01111    123467889995554 445556676666 766       3332 


Q ss_pred             ----------eee-ec-ccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCC-eE---EEEecc-CCCC-------cc
Q psy15191        170 ----------IQT-LP-CHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSG-RL---SLVACS-DKTN-------GV  224 (312)
Q Consensus       170 ----------~~~-~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~-~~---~~~~~~-~~~~-------~~  224 (312)
                                ... +. +.......|+|+|+|++|+.+ +....|+.++..... .+   ..+.+. ...-       ..
T Consensus       290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a  369 (496)
T 3kya_A          290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEA  369 (496)
T ss_dssp             CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGC
T ss_pred             cccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccc
Confidence                      111 11 223446789999999964444 567889987765432 11   222221 0000       00


Q ss_pred             cceeeE-EEEEc-------CCCceEEEeccCCeEEEEe
Q psy15191        225 HKRIIW-GVAWS-------HDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       225 ~~~~v~-~~~~~-------~~~~~l~s~~~dg~i~iwd  254 (312)
                      .-.... .++..       +++.++++=...+.|+.++
T Consensus       370 ~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~  407 (496)
T 3kya_A          370 RMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT  407 (496)
T ss_dssp             BCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC
T ss_pred             ccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe
Confidence            111233 45554       5677777777888999998

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.35  E-value=0.023  Score=45.89  Aligned_cols=156  Identities=13%  Similarity=0.099  Sum_probs=79.2

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCcee---eee----cccCCceeEEEECCC---CCEEEEE-ec-------C
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI---QTL----PCHQLTITQLAFSPD---DTHLVSV-SR-------D  198 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~-~~-------d  198 (312)
                      ....|+|.|+|+.|+++...|.|++ +.. ....   ..+    .........|+++|+   +..|+.+ +.       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            4678999999994555667788887 532 2211   111    112345789999995   4444443 22       2


Q ss_pred             CeEEEEEccCCC----eEE-EEeccCC-CCcccceeeEEEEEcCCCceEEEecc-------------CCeEEEEecCCCC
Q psy15191        199 RRWGLYKRQSSG----RLS-LVACSDK-TNGVHKRIIWGVAWSHDSRYFLTISR-------------DGVCVVWGLGEPP  259 (312)
Q Consensus       199 ~~i~~wd~~~~~----~~~-~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~  259 (312)
                      ..|..|+.....    ... .+..... ....|.  ...++|.|||.++++.+.             .|.|.-++.....
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~  175 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI  175 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence            356666665321    111 1221111 011122  356999999977766543             2456666654321


Q ss_pred             CCccccccc-c-cceeEEeeccCcceeEEEecc-CCCeEEEE
Q psy15191        260 TEEDLVQNT-L-WPEVQKLYGHGYEIYSLAASH-DGTLLASA  298 (312)
Q Consensus       260 ~~~~~~~~~-~-~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~  298 (312)
                      ......... . ...+. -.++. ....++|+| +|+++++-
T Consensus       176 p~~npf~~~~~~~~~i~-a~G~r-np~gl~~d~~~g~l~~~d  215 (353)
T 2g8s_A          176 PDDNPFIKESGVRAEIW-SYGIR-NPQGMAMNPWSNALWLNE  215 (353)
T ss_dssp             CTTCTTTTSTTSCTTEE-EECCS-EEEEEEEETTTTEEEEEE
T ss_pred             CCCCCCcCCCCCCccEE-EEcCc-CccceEEECCCCCEEEEe
Confidence            110000000 0 00111 12333 467899999 67766653

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.33  E-value=0.04  Score=43.88  Aligned_cols=142  Identities=12%  Similarity=0.095  Sum_probs=81.7

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE--e-cccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEE-EEccCCCeE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL--D-VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGL-YKRQSSGRL  212 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~--d-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~-wd~~~~~~~  212 (312)
                      ..+..+.+.+++..++++ .++.+..  | -++|+....  .....+..+.+.|++.+++.+. +|.+.. .|- .+...
T Consensus       122 ~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~--~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW  196 (327)
T 2xbg_A          122 GSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQ--EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAW  196 (327)
T ss_dssp             SCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEEC--SCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSC
T ss_pred             CCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeec--CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCce
Confidence            346777777766655554 4565555  4 457776543  3456788999999988776654 454433 332 12223


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHD  291 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~  291 (312)
                      ..+...      ....+..+++.+++++++. +.+|.+++.+...         ...|..+..- ..+...+.++++.++
T Consensus       197 ~~~~~~------~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~---------G~tW~~~~~~~~~~~~~~~~v~~~~~  260 (327)
T 2xbg_A          197 EPHNRT------TSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDN---------SENWGELLSPLRRNSVGFLDLAYRTP  260 (327)
T ss_dssp             EEEECC------SSSCEEEEEECTTSCEEEE-ETTTEEEEEETTE---------EEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred             eECCCC------CCCccceeEECCCCCEEEE-eCCceEEEecCCC---------CCeeEeccCCcccCCcceEEEEecCC
Confidence            322221      3345778899998876654 4578777663211         1223222111 012235788899888


Q ss_pred             CCeEEEEe
Q psy15191        292 GTLLASAC  299 (312)
Q Consensus       292 ~~~l~s~s  299 (312)
                      +.+++.+.
T Consensus       261 ~~~~~~g~  268 (327)
T 2xbg_A          261 NEVWLAGG  268 (327)
T ss_dssp             SCEEEEES
T ss_pred             CEEEEEeC
Confidence            87777663

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.32  E-value=0.039  Score=43.38  Aligned_cols=210  Identities=8%  Similarity=0.009  Sum_probs=101.7

Q ss_pred             ceEEEecCC--CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC----CcEEEEcCCCCcceeeeeeeecc
Q psy15191         66 KDLVSCSLD--KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD----KSIIVWAPDPTTGLWLETARVGE  131 (312)
Q Consensus        66 ~~l~s~~~d--g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~  131 (312)
                      .+++.|+.+  ..+.+||..+.+-..+...+.        ..++..++.|+.+    ..+.+||+.+.+  +.....   
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~---   87 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDS--WYSKLG---   87 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTE--EEEEEC---
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCe--EEECCC---
Confidence            455666543  467788877665422211111        1133456666644    567788888743  322211   


Q ss_pred             cCCCccceeEEEECCCCCeEEEeecC------CeEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEec-----
Q psy15191        132 VGGNTLGFYGCKFGPRGDYIIAHGFQ------GSLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-----  197 (312)
Q Consensus       132 ~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----  197 (312)
                      ++........+.+  +++.++.|+.+      ..+.. |..  +|.....+.........+.+  +++.++.|+.     
T Consensus        88 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~  163 (306)
T 3ii7_A           88 PPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNV  163 (306)
T ss_dssp             CSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTT
T ss_pred             CCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCC
Confidence            1112222222222  66777777765      22444 544  45554443322222222222  5666666654     


Q ss_pred             ----CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCccccccc
Q psy15191        198 ----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       198 ----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~  268 (312)
                          -..+.+||..+.+- ..+.....    .......+.+  ++++++.|+.+     ..+.+||+.+.          
T Consensus       164 ~~~~~~~~~~yd~~~~~W-~~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~----------  226 (306)
T 3ii7_A          164 SGRVLNSCEVYDPATETW-TELCPMIE----ARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN----------  226 (306)
T ss_dssp             TCEECCCEEEEETTTTEE-EEECCCSS----CCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT----------
T ss_pred             cccccceEEEeCCCCCeE-EECCCccc----hhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC----------
Confidence                34588999886532 22221111    1111112222  67777777654     35788887654          


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .|..+..+.........+.+  ++++++.|+.++.
T Consensus       227 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~  259 (306)
T 3ii7_A          227 EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGV  259 (306)
T ss_dssp             EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSS
T ss_pred             cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCC
Confidence            24333333222222222222  6788888876543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.26  E-value=0.0082  Score=44.32  Aligned_cols=109  Identities=10%  Similarity=-0.040  Sum_probs=60.8

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      ..+..++|+|+|.+.+.  .+|.++-.+..+.....-+.. ...... --..-.++.|.|+|.+.++  .||.|+-++-.
T Consensus        41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP  115 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP  115 (236)
T ss_dssp             TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred             ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence            46789999999986655  777766655433111100000 000000 0001357899999988887  66988777643


Q ss_pred             CCCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEEE
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~  298 (312)
                      +..       ...|--.....+  --..+..|.|.|+|.+.+..
T Consensus       116 ~~~-------~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~  152 (236)
T 1tl2_A          116 QSD-------TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH  152 (236)
T ss_dssp             CST-------TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred             cCC-------CCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence            322       122211111111  11457889999999887776

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.25  E-value=0.054  Score=43.59  Aligned_cols=111  Identities=5%  Similarity=0.031  Sum_probs=67.1

Q ss_pred             ccceeEEEECCCCCeEEEee-----------------cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe-
Q psy15191        136 TLGFYGCKFGPRGDYIIAHG-----------------FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-  196 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~-----------------~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  196 (312)
                      -...+.+++.++|.++++..                 ..|.+.. |..  +.. .....-...+.++|+||++.|+.+. 
T Consensus       164 ~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~-~~~~~l~~pNGia~spDg~~lYvadt  240 (355)
T 3sre_A          164 LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR-VVAEGFDFANGINISPDGKYVYIAEL  240 (355)
T ss_dssp             CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE-EEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred             CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE-EeecCCcccCcceECCCCCEEEEEeC
Confidence            34678899999998777643                 1233433 442  111 1112234568999999998777664 


Q ss_pred             cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCC-eEEEEe
Q psy15191        197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDG-VCVVWG  254 (312)
Q Consensus       197 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg-~i~iwd  254 (312)
                      ..+.|..|++.....+...... .    .....-.+++.+ +|++.+++..++ .|..|+
T Consensus       241 ~~~~I~~~~~~~~g~l~~~~~~-~----~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~  295 (355)
T 3sre_A          241 LAHKIHVYEKHANWTLTPLRVL-S----FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD  295 (355)
T ss_dssp             GGTEEEEEEECTTSCEEEEEEE-E----CSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred             CCCeEEEEEECCCCcEecCEEE-e----CCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence            5689999998754333221111 0    234567889999 599888665443 344343

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.19  E-value=0.057  Score=42.85  Aligned_cols=144  Identities=9%  Similarity=-0.015  Sum_probs=82.4

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCeEEE-ecccCceeeeecccCC
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL-DVTTWKQIQTLPCHQL  178 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~~~~~~  178 (312)
                      ++.+-...+.|..+++.......  ....    ..-..+..+++.+.+..|+ +-...+.|.+ ++..............
T Consensus        49 lyw~D~~~~~I~r~~~~g~~~~~--~~~~----~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~  122 (318)
T 3sov_A           49 IYWSDVSEEAIKRTEFNKTESVQ--NVVV----SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD  122 (318)
T ss_dssp             EEEEETTTTEEEEEETTSSSCCC--EEEE----ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred             EEEEECCCCcEEEEEccCCCceE--EEEc----CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence            44444556677777776532110  0000    1112456788887555444 4445567776 5543222222223345


Q ss_pred             ceeEEEECCCCCEEEEEe--cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEec
Q psy15191        179 TITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGL  255 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~  255 (312)
                      ....++++|.+..|+.+.  ..+.|...++...........       .-...+.++++|++..|+.+ +..+.|..+|+
T Consensus       123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~  195 (318)
T 3sov_A          123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS-------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL  195 (318)
T ss_dssp             SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC-------CCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence            678999998655555554  357888888875443333221       22346789999966655544 56778999998


Q ss_pred             CC
Q psy15191        256 GE  257 (312)
Q Consensus       256 ~~  257 (312)
                      ..
T Consensus       196 dG  197 (318)
T 3sov_A          196 DG  197 (318)
T ss_dssp             TS
T ss_pred             CC
Confidence            64

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.18  E-value=0.1  Score=45.63  Aligned_cols=166  Identities=8%  Similarity=-0.106  Sum_probs=96.8

Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      ....|+..++......  ...+.    ..-..+..++|++.+..++.+. .++.|.. ++..................|+
T Consensus        13 ~~~~I~~i~l~~~~~~--~~~~~----~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA   86 (628)
T 4a0p_A           13 RRADIRRISLETNNNN--VAIPL----TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA   86 (628)
T ss_dssp             ETTEEEEEESSCTTCE--EECCC----CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred             eCCcEEEEECCCCCcc--eEEEc----CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence            5677888888764321  11111    1224578899999766666544 5666766 5544333333332224567899


Q ss_pred             ECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec--cCCeEEEEecCCCCCC
Q psy15191        185 FSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS--RDGVCVVWGLGEPPTE  261 (312)
Q Consensus       185 ~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~  261 (312)
                      +++.+..| ++-...+.|.+.++........+..       .-....+++++|...+|+.+.  ..+.|...++....  
T Consensus        87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~-------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~--  157 (628)
T 4a0p_A           87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK-------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE--  157 (628)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSTTCEEEECS-------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred             EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC-------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--
Confidence            98755544 5555678899999876554333322       223467899998655554443  35677777765442  


Q ss_pred             cccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        262 EDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                                 ...+...-...+.|++++++..|..+
T Consensus       158 -----------~~~l~~~~~~P~GlalD~~~~~LY~a  183 (628)
T 4a0p_A          158 -----------RTTLVPNVGRANGLTIDYAKRRLYWT  183 (628)
T ss_dssp             -----------CEEEECSCSSEEEEEEETTTTEEEEE
T ss_pred             -----------eEEEECCCCCcceEEEccccCEEEEE
Confidence                       12222233456788888876655554

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.16  E-value=0.057  Score=42.30  Aligned_cols=210  Identities=10%  Similarity=0.130  Sum_probs=98.3

Q ss_pred             ceEEEecCC----CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcceeeeeee
Q psy15191         66 KDLVSCSLD----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLETAR  128 (312)
Q Consensus        66 ~~l~s~~~d----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~  128 (312)
                      .+++.|+.+    ..+..||+.+.....+...+.        ..++..++.|+.+     ..+.+||..+.+  +.....
T Consensus        17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~   94 (302)
T 2xn4_A           17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--WTSVAN   94 (302)
T ss_dssp             EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTE--EEEECC
T ss_pred             EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCc--eeeCCC
Confidence            455555543    346677766654321111111        1133455666644     357788887743  322211


Q ss_pred             ecccCCCccceeEEEECCCCCeEEEeecCCe-----EEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEecC--
Q psy15191        129 VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-----LHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD--  198 (312)
Q Consensus       129 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--  198 (312)
                         ++........+.+  +++.++.|+.++.     +.. |+  .+|.....+.........+.+  +++.++.|+.+  
T Consensus        95 ---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~  167 (302)
T 2xn4_A           95 ---MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVA  167 (302)
T ss_dssp             ---CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETT
T ss_pred             ---CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCC
Confidence               1112222222222  5677777776542     333 43  345544433322222222222  56667776643  


Q ss_pred             -----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCCCCCccccccc
Q psy15191        199 -----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       199 -----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~  268 (312)
                           ..+.+||+.+.+-.. +.....    .......+.+  ++++++.|+.++     .+.+||+.+.          
T Consensus       168 ~~~~~~~~~~yd~~~~~W~~-~~~~p~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~----------  230 (302)
T 2xn4_A          168 SRQCLSTVECYNATTNEWTY-IAEMST----RRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN----------  230 (302)
T ss_dssp             TTEECCCEEEEETTTTEEEE-ECCCSS----CCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT----------
T ss_pred             CCccccEEEEEeCCCCcEEE-CCCCcc----ccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC----------
Confidence                 348889987654322 221111    1111122222  677888887643     6888887654          


Q ss_pred             ccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .|..+..+......- + +...++++++.|+.++.
T Consensus       231 ~W~~~~~~~~~r~~~-~-~~~~~~~i~v~GG~~~~  263 (302)
T 2xn4_A          231 AWRQVADMNMCRRNA-G-VCAVNGLLYVVGGDDGS  263 (302)
T ss_dssp             EEEEECCCSSCCBSC-E-EEEETTEEEEECCBCSS
T ss_pred             CEeeCCCCCCccccC-e-EEEECCEEEEECCcCCC
Confidence            233333222111111 1 22236788888876543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.16  E-value=0.045  Score=44.17  Aligned_cols=152  Identities=14%  Similarity=0.132  Sum_probs=79.3

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCc-eeeeec---ccCCceeEEEECCC---CCEEEEEec----C----Ce
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLP---CHQLTITQLAFSPD---DTHLVSVSR----D----RR  200 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~~  200 (312)
                      .....++|.|+|+ |+++..+|.|++ +. +.+ ....+.   ........|+++|+   +..|+.+..    +    ..
T Consensus        29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            4468899999998 455566688877 42 222 222111   12356889999997   444544433    3    56


Q ss_pred             EEEEEccCCC-----eEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-------------CCeEEEEecCCCCCCc
Q psy15191        201 WGLYKRQSSG-----RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-------------DGVCVVWGLGEPPTEE  262 (312)
Q Consensus       201 i~~wd~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~  262 (312)
                      |..|+.....     ....+..... ...|  ....++|.|+|.++++.+.             .|.|.-++........
T Consensus       107 v~r~~~~~~~~~~~~~~~l~~~~~~-~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~  183 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVKTLIDGIPG-AYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD  183 (354)
T ss_dssp             EEEEEECSSSCCEEEEEEEEEEEEC-CSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred             EEEEEECCCCcCcCccEEEEEcCCC-CCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence            7777766431     1111111110 1112  2457999999987776543             2455555543211000


Q ss_pred             ccccccccceeEEeeccCcceeEEEecc-CCCeEEEE
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASA  298 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~  298 (312)
                      .... .  ..+. ..++. ....++|+| +|+++++-
T Consensus       184 npf~-~--~~i~-a~G~r-np~Gla~d~~~g~l~v~d  215 (354)
T 3a9g_A          184 NPFP-N--SPIW-SYGHR-NPQGIDWHRASGVMVATE  215 (354)
T ss_dssp             SSST-T--CCEE-EECCS-CCCEEEECTTTCCEEEEE
T ss_pred             CCCC-C--CcEE-EEccC-CcceEEEeCCCCCEEEEe
Confidence            0000 0  0111 12343 357899999 67766654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.15  E-value=0.071  Score=43.03  Aligned_cols=64  Identities=11%  Similarity=0.144  Sum_probs=42.2

Q ss_pred             eeeEEEEEc-------CCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191        227 RIIWGVAWS-------HDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       227 ~~v~~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ..+..++|.       .+|.++++....+.|...++.......         ....+ .+....+..+++.|||.++++.
T Consensus       259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~---------~~~~~~~~~~~rp~~v~~~pDG~lyv~~  329 (354)
T 3a9g_A          259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVR---------KISTFFKNVFGRLRDVVIDDDGGILIST  329 (354)
T ss_dssp             CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEE---------EEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred             cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCccc---------ceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence            346778883       577888877778888888876432100         11122 2234578999999999887776


Q ss_pred             e
Q psy15191        299 C  299 (312)
Q Consensus       299 s  299 (312)
                      .
T Consensus       330 ~  330 (354)
T 3a9g_A          330 S  330 (354)
T ss_dssp             C
T ss_pred             e
Confidence            4

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.13  E-value=0.14  Score=46.13  Aligned_cols=195  Identities=9%  Similarity=-0.074  Sum_probs=109.7

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----ccc--------cccccCCCC-CceEEEEeCCCcEEE
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----NYL--------PYHMRDDSK-QLHLLSCSMDKSIIV  113 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~~~--------~~~~~~~~~-~~~l~~~~~d~~i~i  113 (312)
                      ...+..|+|.+.     ++.++++-...+.|+.+++....    ...        +.-++.... +.++++-...+.|.+
T Consensus       423 ~~~~~gl~~d~~-----~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v  497 (791)
T 3m0c_C          423 LRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV  497 (791)
T ss_dssp             CSSEEEEEEETT-----TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CCceEEEeeccc-----CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEE
Confidence            456788999875     24566666667888888886531    111        111111222 234445555677777


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      .++.......+..       ........|+++|.+..|+.+..  .+.|.. ++..-.........-.....|++++.+.
T Consensus       498 ~~ldG~~~~~l~~-------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~  570 (791)
T 3m0c_C          498 ADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG  570 (791)
T ss_dssp             EETTSSSEEEEEE-------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTT
T ss_pred             EeCCCCeEEEEEe-------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCC
Confidence            7776432211111       22334789999998666666543  256666 5543333333333335678999998666


Q ss_pred             EEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        191 HLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       191 ~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .|+.+ ...+.|...++........+....     .-....+|++.. +.++++-...+.|...+..++.
T Consensus       571 ~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~-----~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~  634 (791)
T 3m0c_C          571 RLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS  634 (791)
T ss_dssp             EEEEEETTTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred             eEEEEeCCCCcEEEEecCCCceEEEecCCC-----ccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCc
Confidence            66655 455789999998665555444311     111234566643 3455555667788888866654

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.11  E-value=0.07  Score=42.27  Aligned_cols=213  Identities=9%  Similarity=-0.053  Sum_probs=117.4

Q ss_pred             CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----Cccccc--------cc
Q psy15191         25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----EGNYLP--------YH   92 (312)
Q Consensus        25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----~~~~~~--------~~   92 (312)
                      ..|..+  +.++.+....+.. ...+..++|.+.     ++.++++-...+.|..+++..    .....+        ..
T Consensus        10 ~~I~~i--~~~~~~~~~~~~~-~~~p~g~~~d~~-----~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g   81 (316)
T 1ijq_A           10 HEVRKM--TLDRSEYTSLIPN-LRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (316)
T ss_dssp             SSEEEE--ETTSCCCEEEECS-CSSEEEEEEETT-----TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             CeEEEE--ECCCcceEehhcC-CCceEEEEEEeC-----CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence            345443  4555544444443 456789999875     145556666678899998875    121111        11


Q ss_pred             ccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC--CeEEE-ecccCc
Q psy15191         93 MRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ--GSLHL-DVTTWK  168 (312)
Q Consensus        93 ~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~-d~~~~~  168 (312)
                      +.... .+.++++-...+.|.+.++.......+.       .........++++|.+..|+.+...  +.|.. ++.. .
T Consensus        82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-------~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~  153 (316)
T 1ijq_A           82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V  153 (316)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-C
T ss_pred             EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-------ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-C
Confidence            11111 2233344455667777776642211111       1122456889999977666655443  56665 5432 2


Q ss_pred             eeeee-cccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        169 QIQTL-PCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       169 ~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      ....+ ...-...+.|+++|++..|+.+. ..+.|..+|+.............     ......++++. .+.++++-..
T Consensus       154 ~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~-----~~~~P~giav~-~~~ly~~d~~  227 (316)
T 1ijq_A          154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVF-EDKVFWTDII  227 (316)
T ss_dssp             CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEE-TTEEEEEETT
T ss_pred             CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC-----ccCCcEEEEEE-CCEEEEEECC
Confidence            22222 12234578999998776666554 56789999998544333333211     11234567775 4666667777


Q ss_pred             CCeEEEEecCCCC
Q psy15191        247 DGVCVVWGLGEPP  259 (312)
Q Consensus       247 dg~i~iwd~~~~~  259 (312)
                      .+.|..++..++.
T Consensus       228 ~~~V~~~~~~~g~  240 (316)
T 1ijq_A          228 NEAIFSANRLTGS  240 (316)
T ss_dssp             TTEEEEEETTTCC
T ss_pred             CCeEEEEeCCCCc
Confidence            8899999876554

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.08  E-value=0.0092  Score=52.99  Aligned_cols=113  Identities=11%  Similarity=-0.039  Sum_probs=64.6

Q ss_pred             ceeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec--CCeEEEEEccCCCeEE
Q psy15191        138 GFYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR--DRRWGLYKRQSSGRLS  213 (312)
Q Consensus       138 ~v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~  213 (312)
                      .+..+++.+.+..| ++-...+.|.+ ++........+.........|+++|.+.+|+.+..  .+.|..+++.......
T Consensus       454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~  533 (699)
T 1n7d_A          454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  533 (699)
T ss_dssp             -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred             CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence            35668888654444 44345566766 55433322222222345678899996555554432  2678888776433322


Q ss_pred             EEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecCC
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLGE  257 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~  257 (312)
                      .+..       .....+.|+|+|++..| ++-+..+.|.++++..
T Consensus       534 l~~~-------~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          534 LVTE-------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             ESCS-------SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             EEeC-------CCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence            2211       12235679999876554 4445677899999864

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.98  E-value=0.12  Score=43.37  Aligned_cols=106  Identities=15%  Similarity=0.147  Sum_probs=58.0

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE-ecccCcee--eeec------ccCCceeEEEECCC---CCEEEEEe-c-------
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI--QTLP------CHQLTITQLAFSPD---DTHLVSVS-R-------  197 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~--~~~~------~~~~~v~~~~~~~~---~~~l~~~~-~-------  197 (312)
                      ....|+|.|+|+++++-...+.|++ +..+....  ..+.      .....+..|+|+|+   +..|+.+. .       
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~  107 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence            4678999999986666444445665 44333322  2222      12456779999995   44444443 2       


Q ss_pred             -----CCeEEEEEccCCC-e----EEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        198 -----DRRWGLYKRQSSG-R----LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       198 -----d~~i~~wd~~~~~-~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                           ...|.-++..... .    ...+..... .  .......++|.|||.+.++.+.
T Consensus       108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~--~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-S--KDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-C--SSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccEEEEEEECCCCCCcCCcEEEEEcCCC-C--CCCCCCeEeECCCCeEEEEECC
Confidence                 2346666654321 1    112211111 1  1223678999999997776553

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.90  E-value=0.12  Score=41.47  Aligned_cols=154  Identities=19%  Similarity=0.233  Sum_probs=81.3

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCce--eeee----cccCCceeEEEECCC---CCEEEEE---ecCCeEEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ--IQTL----PCHQLTITQLAFSPD---DTHLVSV---SRDRRWGL  203 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~~  203 (312)
                      .....|+|.|+|+.+++--..|.|++ +..+.+.  +..+    .........|+++|+   +..|+..   ..++.|.-
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            45689999999986666544788877 5433332  1111    123456889999995   3334332   23455666


Q ss_pred             EEccCC--------CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-------------CCeEEEEecCCCCCCc
Q psy15191        204 YKRQSS--------GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-------------DGVCVVWGLGEPPTEE  262 (312)
Q Consensus       204 wd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~  262 (312)
                      |.....        .....+..... ...|.  ...++|.|||.+.++.+.             .|.|.-.+........
T Consensus       112 ~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H~--g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~  188 (347)
T 3das_A          112 MLYDEKKPSGEQLGAPDTVFRGIPK-GVIHN--GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG  188 (347)
T ss_dssp             EEBCTTSCTTCCBCCCEEEEEEECC-CSSCC--CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred             EEeCCCCcccccCCCcEEEEEcCCC-CCCcc--CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence            665541        11122221111 11132  457999999988777543             2444444433211100


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      .....   ..+. -.+|. ....++|+|+|.+.++-
T Consensus       189 nPf~~---~~i~-a~G~R-Np~Gla~dp~G~L~~~d  219 (347)
T 3das_A          189 NPFPG---SPVY-SYGHR-NVQGLAWDDKQRLFASE  219 (347)
T ss_dssp             CSSTT---CCEE-EBCCS-BCCEEEECTTCCEEEEE
T ss_pred             CCCCC---CeEE-eeCCC-CcceEEECCCCCEEEEe
Confidence            00000   0111 22454 45689999998877654

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.87  E-value=0.11  Score=40.81  Aligned_cols=211  Identities=8%  Similarity=0.048  Sum_probs=101.3

Q ss_pred             CceEEEecCC----CcEEEeeecCCcccccccccC--------CCCCceEEEEeC----C-----CcEEEEcCCCCccee
Q psy15191         65 HKDLVSCSLD----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSM----D-----KSIIVWAPDPTTGLW  123 (312)
Q Consensus        65 ~~~l~s~~~d----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~----d-----~~i~i~d~~~~~~~~  123 (312)
                      +.+++.|+.+    ..+.+||..+.+...+...+.        ..++..++.|+.    +     ..+.+||+.+.+  +
T Consensus        25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W  102 (308)
T 1zgk_A           25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--W  102 (308)
T ss_dssp             CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE--E
T ss_pred             CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe--E
Confidence            4566666632    357788877655422211111        113345555554    2     457888887743  3


Q ss_pred             eeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191        124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  195 (312)
                      .....   ++........+.+  +++.++.|+.++     .+.. |+.  +|.....+......-..+.+  ++..++.|
T Consensus       103 ~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G  175 (308)
T 1zgk_A          103 SPCAP---MSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG  175 (308)
T ss_dssp             EECCC---CSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred             eECCC---CCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence            22211   1112222222232  667777776543     2333 443  45544433322222222333  56777777


Q ss_pred             ecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCcccc
Q psy15191        196 SRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       196 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~  265 (312)
                      +.+     ..+.+||+.+.+-. .+.....    .......+.+  ++++++.|+.+     ..+.+||+.+.       
T Consensus       176 G~~~~~~~~~~~~yd~~~~~W~-~~~~~p~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-------  241 (308)
T 1zgk_A          176 GFDGTNRLNSAECYYPERNEWR-MITAMNT----IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE-------  241 (308)
T ss_dssp             CBCSSCBCCCEEEEETTTTEEE-ECCCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT-------
T ss_pred             CCCCCCcCceEEEEeCCCCeEe-eCCCCCC----ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC-------
Confidence            654     45888998765322 2221111    1111122333  67778888764     46888888654       


Q ss_pred             cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                         .|..+..+....... +++ .-++++++.|+.++.
T Consensus       242 ---~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~  274 (308)
T 1zgk_A          242 ---TWTFVAPMKHRRSAL-GIT-VHQGRIYVLGGYDGH  274 (308)
T ss_dssp             ---EEEECCCCSSCCBSC-EEE-EETTEEEEECCBCSS
T ss_pred             ---cEEECCCCCCCccce-EEE-EECCEEEEEcCcCCC
Confidence               233333222111111 122 236788888876543

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.83  E-value=0.12  Score=40.51  Aligned_cols=221  Identities=10%  Similarity=0.030  Sum_probs=105.9

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCCceEE--EEccccCcEEEEEEecCcCcCCCCceEEEecCC----CcEEEeeecCCcc
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGGKVLY--TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD----KTAILWKYVSEGN   87 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d----g~i~vw~~~~~~~   87 (312)
                      .+.++.+.|....-....||+.+.+-..  .+......-..+.  -+      +.+++.|+.+    ..+.+||..+..-
T Consensus        11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~------~~lyv~GG~~~~~~~~~~~~d~~~~~W   82 (306)
T 3ii7_A           11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WD------NVVYILGGSQLFPIKRMDCYNVVKDSW   82 (306)
T ss_dssp             CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ET------TEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred             cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--EC------CEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence            3566777665432223446776654221  1111111111111  23      5677788755    5678888877653


Q ss_pred             cccccccC--------CCCCceEEEEeCC------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE
Q psy15191         88 YLPYHMRD--------DSKQLHLLSCSMD------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA  153 (312)
Q Consensus        88 ~~~~~~~~--------~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  153 (312)
                      ..+...+.        ..++..++.|+.+      ..+.+||+.+.+  +.....   ++........+.  -+++.++.
T Consensus        83 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~---~p~~r~~~~~~~--~~~~iyv~  155 (306)
T 3ii7_A           83 YSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKPS---MLTQRCSHGMVE--ANGLIYVC  155 (306)
T ss_dssp             EEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEECC---CSSCCBSCEEEE--ETTEEEEE
T ss_pred             EECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCCC---CcCCcceeEEEE--ECCEEEEE
Confidence            21111111        1133456666654      457888888743  322211   111112222222  25667777


Q ss_pred             eecCC---------eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEecC-----CeEEEEEccCCCeEEEEe
Q psy15191        154 HGFQG---------SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-----RRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       154 ~~~~~---------~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~  216 (312)
                      |+.++         .+.. |+  .+|.....+......-..+.+  +++.++.|+.+     ..+.+||+.+.+- ..+.
T Consensus       156 GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W-~~~~  232 (306)
T 3ii7_A          156 GGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEW-KMVS  232 (306)
T ss_dssp             CCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEE-EECC
T ss_pred             CCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcE-EECC
Confidence            76432         2333 44  345555433322222222222  56677777654     4588999876532 2222


Q ss_pred             ccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCC
Q psy15191        217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEP  258 (312)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~  258 (312)
                      ....    .......+.+  ++++++.|+.+     ..+.+||+.+.
T Consensus       233 ~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          233 PMPW----KGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             CCSC----CBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             CCCC----CccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence            1111    1111222333  67788888754     46888887654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.60  E-value=0.21  Score=40.25  Aligned_cols=63  Identities=17%  Similarity=0.280  Sum_probs=40.7

Q ss_pred             eeeEEEEEcC-------CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        227 RIIWGVAWSH-------DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       227 ~~v~~~~~~~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ..+..++|..       +|.++++.-..+.|...++..+...         .....+......+.++++.|||.++++.
T Consensus       271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~---------~~~~~~~~~~~rp~~v~~~pdG~lyv~t  340 (353)
T 2g8s_A          271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT---------EDGRILTDRGQRIRDVRTGPDGYLYVLT  340 (353)
T ss_dssp             CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE---------EEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred             cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe---------eeEEcccCCCCceeEEEECCCCcEEEEE
Confidence            3567788863       5778887777888888887643100         0111122334578999999999977764

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.45  E-value=0.22  Score=38.84  Aligned_cols=178  Identities=13%  Similarity=0.135  Sum_probs=89.9

Q ss_pred             CceEEEecCC-----CcEEEeeecCCc---ccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCccee
Q psy15191         65 HKDLVSCSLD-----KTAILWKYVSEG---NYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGLW  123 (312)
Q Consensus        65 ~~~l~s~~~d-----g~i~vw~~~~~~---~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~  123 (312)
                      +.+++.|+.+     ..+.+||..+..   ...+...+.        ..++..++.|+.+     ..+.+||+.+.+  +
T Consensus        63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W  140 (301)
T 2vpj_A           63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--W  140 (301)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--E
T ss_pred             CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe--E
Confidence            5677778765     358889988776   321111111        1133455566543     357788887743  3


Q ss_pred             eeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191        124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  195 (312)
                      .....   ++........+.+  +++.++.|+.++     .+.. |+  .+|.....+.........+.+  +++.++.|
T Consensus       141 ~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G  213 (301)
T 2vpj_A          141 SMLGD---MQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVG  213 (301)
T ss_dssp             EEEEE---CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred             EECCC---CCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEe
Confidence            22221   1111122222222  667777777543     2444 54  455555433322222222233  56777777


Q ss_pred             ecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCC
Q psy15191        196 SRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEP  258 (312)
Q Consensus       196 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~  258 (312)
                      +.+     ..+.+||+.+.+-. .+.....    .......+.+  ++++++.|+.+     ..+.+||+.+.
T Consensus       214 G~~~~~~~~~v~~yd~~~~~W~-~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          214 GFDGTAHLSSVEAYNIRTDSWT-TVTSMTT----PRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             CBCSSSBCCCEEEEETTTTEEE-EECCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             CCCCCcccceEEEEeCCCCcEE-ECCCCCC----cccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            764     46899999865433 2221111    1111122223  67788888765     35778887654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.45  E-value=0.23  Score=38.85  Aligned_cols=178  Identities=13%  Similarity=0.111  Sum_probs=88.7

Q ss_pred             CceEEEecCCC-----cEEEeeecCCcccccccccC--------CCCCceEEEEeCCC-----cEEEEcCCCCcceeeee
Q psy15191         65 HKDLVSCSLDK-----TAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMDK-----SIIVWAPDPTTGLWLET  126 (312)
Q Consensus        65 ~~~l~s~~~dg-----~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~  126 (312)
                      +.+++.|+.++     .+.+||..+..-..+...+.        ..++..++.|+.++     .+.+||+.+.+  +...
T Consensus        62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~  139 (302)
T 2xn4_A           62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE--WFHV  139 (302)
T ss_dssp             TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE--EEEE
T ss_pred             CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe--Eeec
Confidence            56777887553     47788877655322111111        11334566666543     46778887643  3222


Q ss_pred             eeecccCCCccceeEEEECCCCCeEEEeecCC-------eEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191        127 ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-------SLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       127 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-------~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ..   ++........+.+  +++.++.|+.++       .+.. |+.  +|.....+.........+.+  +++.++.|+
T Consensus       140 ~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG  212 (302)
T 2xn4_A          140 AP---MNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGG  212 (302)
T ss_dssp             CC---CSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred             CC---CCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECC
Confidence            11   1111222222222  566777776432       2333 543  45555444322222222232  567777777


Q ss_pred             cC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCC
Q psy15191        197 RD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEP  258 (312)
Q Consensus       197 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~  258 (312)
                      .+     ..+.+||+.+.+- ..+.....    .......+.+  ++++++.|+.++     .+.+||+.+.
T Consensus       213 ~~~~~~~~~~~~yd~~~~~W-~~~~~~~~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          213 HDGPLVRKSVEVYDPTTNAW-RQVADMNM----CRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             BSSSSBCCCEEEEETTTTEE-EEECCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             CCCCcccceEEEEeCCCCCE-eeCCCCCC----ccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCC
Confidence            64     3688999876533 22221111    1111112222  677888887654     4888887664

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.42  E-value=0.65  Score=43.82  Aligned_cols=90  Identities=13%  Similarity=0.235  Sum_probs=54.8

Q ss_pred             EEE-ecccCceeeeec-ccCCceeEEE---ECCC-CCEEEEEe----------cCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        160 LHL-DVTTWKQIQTLP-CHQLTITQLA---FSPD-DTHLVSVS----------RDRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       160 i~~-d~~~~~~~~~~~-~~~~~v~~~~---~~~~-~~~l~~~~----------~d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      +++ |..+|+....+. .....+.+++   |..+ ..+|+.|+          ..|.|++|++... .+..+....    
T Consensus       809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~----  883 (1158)
T 3ei3_A          809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKE----  883 (1158)
T ss_dssp             EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEE----
T ss_pred             EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEE----
Confidence            555 888888776554 2334455544   4332 46788776          2478999999743 333332211    


Q ss_pred             ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                       .+++|++++-- +|++|++.  ..+|++|++...
T Consensus       884 -v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~  914 (1158)
T 3ei3_A          884 -VKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTE  914 (1158)
T ss_dssp             -ESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTT
T ss_pred             -cCCcCEEEeee-CCEEEEEc--CCEEEEEECCCC
Confidence             55678887643 46555543  468999999765

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.06  E-value=0.31  Score=40.74  Aligned_cols=118  Identities=11%  Similarity=0.092  Sum_probs=63.3

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-cccceeeEEEEEcCC---CceE-EEecc------
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-GVHKRIIWGVAWSHD---SRYF-LTISR------  246 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l-~s~~~------  246 (312)
                      .....|+|.|+|+++++-...+.|++++..+.............. ......+..|+|+|+   +.+| ++-+.      
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            345799999999977765444578888765444322222211110 012456789999995   4444 43332      


Q ss_pred             ------CCeEEEEecCCCCCCcccccccccceeE-Eeec-cCcceeEEEeccCCCeEEEEec
Q psy15191        247 ------DGVCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYG-HGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       247 ------dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                            ...|.-|++......  +.   ..+.+. .+.. .......|+|.|||.++++.+.
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~--~~---~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDT--LE---KPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTE--EE---EEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             ccccccccEEEEEEECCCCCC--cC---CcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                  234555655432110  00   001111 1221 1224688999999998888654

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.04  E-value=0.39  Score=37.64  Aligned_cols=178  Identities=11%  Similarity=0.064  Sum_probs=87.4

Q ss_pred             CceEEEecC----C-----CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcce
Q psy15191         65 HKDLVSCSL----D-----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGL  122 (312)
Q Consensus        65 ~~~l~s~~~----d-----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~  122 (312)
                      +.+++.|+.    +     ..+.+||..+..-..+...+.        ..++..++.|+.+     ..+.+||+.+.+  
T Consensus        71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--  148 (308)
T 1zgk_A           71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE--  148 (308)
T ss_dssp             TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE--
T ss_pred             CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe--
Confidence            567777776    2     357788877665322211111        1133355555533     357788887633  


Q ss_pred             eeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191        123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVS  194 (312)
Q Consensus       123 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  194 (312)
                      +.....   ++........+.+  +++.++.|+.++     .+.. |+  .+|.....+.........+.+  +++.++.
T Consensus       149 W~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~  221 (308)
T 1zgk_A          149 WHLVAP---MLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAA  221 (308)
T ss_dssp             EEECCC---CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred             EeECCC---CCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEE
Confidence            322211   1112222222233  567777776543     2333 44  345554443322222222333  6677777


Q ss_pred             EecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCC
Q psy15191        195 VSRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEP  258 (312)
Q Consensus       195 ~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~  258 (312)
                      |+.+     ..+.+||+.+.+- ..+.....    .......+.+  ++++++.|+.++     .+.+||+.+.
T Consensus       222 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          222 GGYDGQDQLNSVERYDVETETW-TFVAPMKH----RRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             CCBCSSSBCCCEEEEETTTTEE-EECCCCSS----CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             eCCCCCCccceEEEEeCCCCcE-EECCCCCC----CccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence            7765     4589999886532 22221111    1111122222  677788877543     5777877654

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.00  E-value=0.78  Score=40.76  Aligned_cols=195  Identities=10%  Similarity=0.036  Sum_probs=92.3

Q ss_pred             eEEEEeCC----CcEEEEcCCCCcceeee-eeeecccCCCccceeEEEECCCCCeEEEeecCC------eEEE-eccc--
Q psy15191        101 HLLSCSMD----KSIIVWAPDPTTGLWLE-TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG------SLHL-DVTT--  166 (312)
Q Consensus       101 ~l~~~~~d----~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------~i~~-d~~~--  166 (312)
                      .++.|+.+    ..+.+||..+.+-..+. ..+....+........+.+..+++.++.|+.++      .+.+ |..+  
T Consensus       400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~  479 (695)
T 2zwa_A          400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE  479 (695)
T ss_dssp             EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE
T ss_pred             EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc
Confidence            45555532    45777887764322221 100011112222222333332777778877543      2333 5544  


Q ss_pred             CceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEE
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLT  243 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s  243 (312)
                      |.....+...... .+++.-.++..++.|+.++  .+.+||..+.. ...+........ ......++.+..+ +++++.
T Consensus       480 W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~-~r~~~~a~v~~~~~~~iyv~  556 (695)
T 2zwa_A          480 WSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQ-NSLVSAGLEFDPVSKQGIIL  556 (695)
T ss_dssp             EEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGG-SCCBSCEEEEETTTTEEEEE
T ss_pred             EEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCC-cccceeEEEEeCCCCEEEEE
Confidence            6666544422222 2233324788888887654  68999988654 222221100000 1112233555555 677777


Q ss_pred             ecc--C-----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        244 ISR--D-----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       244 ~~~--d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      |+.  +     +.+.+||+.+..- .   ..-.|..+.........-.+++...++++++.||.++
T Consensus       557 GG~~~~~~~~~~~v~~yd~~~~~w-~---~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~  618 (695)
T 2zwa_A          557 GGGFMDQTTVSDKAIIFKYDAENA-T---EPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSP  618 (695)
T ss_dssp             CCBCTTSSCBCCEEEEEEECTTCS-S---CCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCS
T ss_pred             CCcCCCCCeeeCcEEEEEccCCcc-c---cceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccC
Confidence            765  2     3688999877631 0   0111333333211111111233334478888887643

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.81  E-value=0.26  Score=41.30  Aligned_cols=121  Identities=11%  Similarity=0.047  Sum_probs=62.8

Q ss_pred             ceeEEEECCCCC-EEEEEecCCeEEEEEccCCC---eEEEEeccCCCC--cccceeeEEEEEcCC----CceEEEecc--
Q psy15191        179 TITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSG---RLSLVACSDKTN--GVHKRIIWGVAWSHD----SRYFLTISR--  246 (312)
Q Consensus       179 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~--~~~~~~v~~~~~~~~----~~~l~s~~~--  246 (312)
                      ....|+|.|||. .|+.+...|.|++++.....   .+..+.......  ......+..|+|+|+    +.+.++-+.  
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~   94 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ   94 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence            457899999996 45556788999999754221   111111100000  002456789999996    444443322  


Q ss_pred             C----------CeEEEEecCCCCCC-cccccccccceeEEee--ccCcceeEEEeccCCCeEEEEecCC
Q psy15191        247 D----------GVCVVWGLGEPPTE-EDLVQNTLWPEVQKLY--GHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       247 d----------g~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      +          ..|.-|.+...... .....   .+.+..+.  ........|+|.|||.+.++.+..+
T Consensus        95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~---~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C           95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRT---ARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGG---CEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             CCcccCCcccceEEEEEEEcCCCCCccCCCC---ceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence            1          13444665432111 00000   01222222  1122357899999999888876543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.46  E-value=0.7  Score=36.30  Aligned_cols=173  Identities=12%  Similarity=0.079  Sum_probs=80.7

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-----C--C----eEEE-ecc--c
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-----Q--G----SLHL-DVT--T  166 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~--~----~i~~-d~~--~  166 (312)
                      +++.|+  ..+.+||..+.+  +.. ..   ++.............++..++.|+.     .  .    .+.. |..  +
T Consensus         7 l~~~GG--~~~~~yd~~~~~--W~~-~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~   78 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANE--CYC-AS---LSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE   78 (315)
T ss_dssp             EEEEET--TEEEEEETTTTE--EEE-EE---CCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE
T ss_pred             EEEEcC--CceEEECCCCCe--Eec-CC---CCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe
Confidence            344455  568888888743  432 11   1111112223333457777777774     1  1    1333 544  3


Q ss_pred             CceeeeecccCCceeEEEECCCCCEEEEEecC--------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD--------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                      |.....+.........+.+  ++..++.|+.+        ..+.+||..+.+- ..+.....    .......+.  .++
T Consensus        79 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~----~r~~~~~~~--~~~  149 (315)
T 4asc_A           79 WLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPY----VVYGHTVLS--HMD  149 (315)
T ss_dssp             EEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSS----CCBSCEEEE--ETT
T ss_pred             EEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCC----cccceeEEE--ECC
Confidence            5444333311111122222  56667777642        4588899876532 22221111    111111222  366


Q ss_pred             ceEEEecc-C-----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        239 RYFLTISR-D-----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       239 ~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      ++++.|+. +     ..+.+||..+.          .|..+..+......-..+  .-++++++.|+.++
T Consensus       150 ~iyv~GG~~~~~~~~~~~~~yd~~~~----------~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~  207 (315)
T 4asc_A          150 LVYVIGGKGSDRKCLNKMCVYDPKKF----------EWKELAPMQTARSLFGAT--VHDGRIIVAAGVTD  207 (315)
T ss_dssp             EEEEECCBCTTSCBCCCEEEEETTTT----------EEEECCCCSSCCBSCEEE--EETTEEEEEEEECS
T ss_pred             EEEEEeCCCCCCcccceEEEEeCCCC----------eEEECCCCCCchhceEEE--EECCEEEEEeccCC
Confidence            77777776 2     36888887654          233333222111111112  23677888887654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.38  E-value=0.3  Score=39.22  Aligned_cols=52  Identities=4%  Similarity=-0.085  Sum_probs=24.7

Q ss_pred             eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC------eEEEEecCCC
Q psy15191        200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG------VCVVWGLGEP  258 (312)
Q Consensus       200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~  258 (312)
                      .+.+||+.+.+-...-..+..     .....++.  .++++++.|+.++      .|.++++...
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~-----r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~  343 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQG-----RAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDN  343 (357)
T ss_dssp             CCEEEECC---CEEEEECSSC-----CBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CC
T ss_pred             eEEEEecCCCceeeCCCCCCC-----cccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCc
Confidence            477899886543332221111     11111222  3678888887543      4556677665

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.13  E-value=0.9  Score=35.65  Aligned_cols=178  Identities=9%  Similarity=0.057  Sum_probs=85.2

Q ss_pred             CceEEEecC----C-------CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC--------CcEEEEcCC
Q psy15191         65 HKDLVSCSL----D-------KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD--------KSIIVWAPD  117 (312)
Q Consensus        65 ~~~l~s~~~----d-------g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d--------~~i~i~d~~  117 (312)
                      +.+++.|+.    +       ..+.+||..+.+-..+...+.        .-++..++.|+.+        ..+.+||+.
T Consensus        46 ~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~  125 (315)
T 4asc_A           46 NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRL  125 (315)
T ss_dssp             CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETT
T ss_pred             CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCC
Confidence            677777773    1       126677776654321111111        1133355555532        457888887


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-C-----CeEEE-ecc--cCceeeeecccCCceeEEEECCC
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-Q-----GSLHL-DVT--TWKQIQTLPCHQLTITQLAFSPD  188 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-----~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~  188 (312)
                      +.+  +.....   ++........+.  .+++.++.|+. +     ..+.. |+.  +|.....+.........+.+  +
T Consensus       126 ~~~--W~~~~~---~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~  196 (315)
T 4asc_A          126 SFK--WGESDP---LPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--D  196 (315)
T ss_dssp             TTE--EEECCC---CSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T
T ss_pred             CCc--EeECCC---CCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--C
Confidence            743  322211   111222222222  35667777775 2     23444 544  45555443322222222223  6


Q ss_pred             CCEEEEEecCC-----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--------------e
Q psy15191        189 DTHLVSVSRDR-----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--------------V  249 (312)
Q Consensus       189 ~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------------~  249 (312)
                      ++.++.|+.++     .+.+||+.+.+- ..+.....    .......+.+  ++++++.|+.++              .
T Consensus       197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~----~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~  269 (315)
T 4asc_A          197 GRIIVAAGVTDTGLTSSAEVYSITDNKW-APFEAFPQ----ERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELND  269 (315)
T ss_dssp             TEEEEEEEECSSSEEEEEEEEETTTTEE-EEECCCSS----CCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred             CEEEEEeccCCCCccceEEEEECCCCeE-EECCCCCC----cccceeEEEE--CCEEEEECCccccCcCCccccccccCc
Confidence            67777777654     488889876532 22222111    1111122223  667777777532              4


Q ss_pred             EEEEecCCC
Q psy15191        250 CVVWGLGEP  258 (312)
Q Consensus       250 i~iwd~~~~  258 (312)
                      +.+||+.+.
T Consensus       270 v~~yd~~~~  278 (315)
T 4asc_A          270 IWRYNEEEK  278 (315)
T ss_dssp             EEEEETTTT
T ss_pred             EEEecCCCC
Confidence            667777554

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.07  E-value=0.14  Score=40.77  Aligned_cols=106  Identities=6%  Similarity=-0.051  Sum_probs=58.6

Q ss_pred             ceEEEecCCCcEEEeeecCCccc-----c----ccccc--CC-CCCceEEEE-eCCCcEEEEcCCCCcceeeeeeeeccc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY-----L----PYHMR--DD-SKQLHLLSC-SMDKSIIVWAPDPTTGLWLETARVGEV  132 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~-----~----~~~~~--~~-~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~  132 (312)
                      ..++.++.||.|.-.|..+++..     .    +....  .. .++..++.. +.||.|..++..++...  .......+
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~--~~~~~~~l   88 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK--LPLSIRQL   88 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE--EEEEHHHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE--eeeccccc
Confidence            46677777777777776666541     0    11100  01 122333343 68999999998874332  22222111


Q ss_pred             CCCccceeE---EEE-C----CCCCeEEEeecCCeEEE-ecccCceeeeec
Q psy15191        133 GGNTLGFYG---CKF-G----PRGDYIIAHGFQGSLHL-DVTTWKQIQTLP  174 (312)
Q Consensus       133 ~~~~~~v~~---~~~-~----~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~  174 (312)
                      . ...++..   ... .    ..+..+++|+.+|.+.- |.++++.+..+.
T Consensus        89 v-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           89 V-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             H-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             e-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            1 1111111   000 0    14567888999998887 999999988876

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=94.95  E-value=1.5  Score=37.39  Aligned_cols=78  Identities=15%  Similarity=0.232  Sum_probs=45.3

Q ss_pred             eeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCC--cccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc
Q psy15191        228 IIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTE--EDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP  304 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~  304 (312)
                      ....+..+|||++++.++ .+.++.++|+..-...  ..+...+. ..+.... -.......+|.++|....|---|++ 
T Consensus       324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq-  400 (638)
T 3sbq_A          324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ-  400 (638)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEEECCB-CCSCEEEEEECSSSEEEEEETTTTE-
T ss_pred             CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc-ceEeecc-CCCcccEEEECCCCceEeeeeecce-
Confidence            345688999999988766 5779999998742110  00000000 0122222 2345678899999965555534444 


Q ss_pred             ccceEEeC
Q psy15191        305 EHAAIIIW  312 (312)
Q Consensus       305 ~dg~i~iW  312 (312)
                          |.-|
T Consensus       401 ----vvkW  404 (638)
T 3sbq_A          401 ----VVKW  404 (638)
T ss_dssp             ----EEEE
T ss_pred             ----EEEE
Confidence                7666

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=94.87  E-value=1.4  Score=36.45  Aligned_cols=187  Identities=11%  Similarity=0.132  Sum_probs=108.5

Q ss_pred             CceEEEecCCCcEEEeeecCCcccccccc-------cC-CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee-cccCCC
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYLPYHM-------RD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV-GEVGGN  135 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-------~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~  135 (312)
                      .+.+|.=. ..+++|+|+++...+....+       .| +++  .|+-. .+..|+-|++.... ...+.+.. ..+  .
T Consensus        77 ~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~--~l~lV-T~taVyHWsi~~~s-~P~kvFdR~~~L--~  149 (494)
T 1bpo_A           77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALV-TDNAVYHWSMEGES-QPVKMFDRHSSL--A  149 (494)
T ss_dssp             SSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETT--EEEEE-CSSEEEEEESSSSC-CCEEEEECCGGG--T
T ss_pred             CcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCC--eEEEE-cCCeeEEecccCCC-Cchhheecchhc--c
Confidence            66666554 67899999998876432222       22 222  23322 34579999997522 22222221 222  2


Q ss_pred             ccceeEEEECCCCCeEEEee---cC----CeEEEecccCceeeeecccCCceeEEEECCCC---CEEEEEecC---CeEE
Q psy15191        136 TLGFYGCKFGPRGDYIIAHG---FQ----GSLHLDVTTWKQIQTLPCHQLTITQLAFSPDD---THLVSVSRD---RRWG  202 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~---~~----~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d---~~i~  202 (312)
                      ...|..-..+++.++++..+   .+    |.+.+-....+..+.+.+|......+.+..+.   ..++.+...   +.++
T Consensus       150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh  229 (494)
T 1bpo_A          150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH  229 (494)
T ss_dssp             TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred             cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence            45677888899999987544   23    34444223344455566787766666554321   234444432   7889


Q ss_pred             EEEccCC---C-e--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        203 LYKRQSS---G-R--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       203 ~wd~~~~---~-~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      +-++...   . .  .......-... .......++..++....+..-+.-|.|++||++++.
T Consensus       230 i~Ei~~~~~~~~~f~kk~vdv~fppe-~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt  291 (494)
T 1bpo_A          230 IIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  291 (494)
T ss_dssp             EEECSCCCTTCCCCCCEEEECCCCTT-STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred             EEEcCCCccCCCCccceeeeeeCCcc-cccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence            9888543   0 0  11111111111 134455678888888888888999999999999985

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.87  E-value=1.8  Score=37.85  Aligned_cols=214  Identities=8%  Similarity=-0.075  Sum_probs=120.7

Q ss_pred             CCCceEEEEEeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc--------c
Q psy15191         23 HKSKVMAVKWNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH--------M   93 (312)
Q Consensus        23 h~~~v~~~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--------~   93 (312)
                      +...|..+.  .++......+. ..-..+..++|.+.     ++.++++-..++.|..++++......+..        +
T Consensus        13 ~~~~I~~i~--l~~~~~~~~~~~~~~~~~~~l~~d~~-----~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl   85 (628)
T 4a0p_A           13 RRADIRRIS--LETNNNNVAIPLTGVKEASALDFDVT-----DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM   85 (628)
T ss_dssp             ETTEEEEEE--SSCTTCEEECCCCSCSCEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred             eCCcEEEEE--CCCCCcceEEEcCCCCceEEEEEECC-----CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence            445565553  33333333322 12356789999986     24556666677889888876543321111        1


Q ss_pred             cCC-CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCce
Q psy15191         94 RDD-SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQ  169 (312)
Q Consensus        94 ~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~  169 (312)
                      +.. ..+.++++-...+.|.+.+++......+..       ..-.....+++.|....|+....  .+.|.. ++.....
T Consensus        86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~  158 (628)
T 4a0p_A           86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER  158 (628)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence            111 122334444556677777776532221111       22244689999996666665542  445555 5443332


Q ss_pred             eeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        170 IQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       170 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      .... ..-.....|++++++..|+.+ ...+.|..+|+..... ..+..       ......++++.. +.++++-...+
T Consensus       159 ~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~-------~l~~P~glav~~-~~ly~tD~~~~  228 (628)
T 4a0p_A          159 TTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD-------DLPHPFGLTQYQ-DYIYWTDWSRR  228 (628)
T ss_dssp             EEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE-------CCSCEEEEEEET-TEEEEEETTTT
T ss_pred             EEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec-------cCCCceEEEEEC-CEEEEecCCCC
Confidence            2222 234567899999976666655 4567899999976554 33322       122345777765 45556666678


Q ss_pred             eEEEEecCCCCC
Q psy15191        249 VCVVWGLGEPPT  260 (312)
Q Consensus       249 ~i~iwd~~~~~~  260 (312)
                      .|...|..++..
T Consensus       229 ~I~~~dk~tg~~  240 (628)
T 4a0p_A          229 SIERANKTSGQN  240 (628)
T ss_dssp             EEEEEETTTCCS
T ss_pred             EEEEEECCCCCc
Confidence            899888766643

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.56  E-value=1.3  Score=34.76  Aligned_cols=141  Identities=11%  Similarity=0.101  Sum_probs=65.8

Q ss_pred             eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec----CCe-------EEE-ec--cc
Q psy15191        101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF----QGS-------LHL-DV--TT  166 (312)
Q Consensus       101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~~-------i~~-d~--~~  166 (312)
                      .++.|+.  .+..||..+.+  +.. ....   .............++..++.|+.    ++.       +.. |.  .+
T Consensus        18 i~~~GG~--~~~~yd~~~~~--W~~-~~~~---~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~   89 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENE--CYL-TALA---EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE   89 (318)
T ss_dssp             EEEECSS--EEEEEETTTTE--EEE-EEEC---TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred             hhhcccc--ceEEECCCCCc--eec-ccCC---ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence            3444443  37888887743  333 1111   11111122334456777777773    111       333 44  34


Q ss_pred             CceeeeecccCCceeEEEECCCCCEEEEEecC-------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191        167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR  239 (312)
Q Consensus       167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  239 (312)
                      |.....+.........+.+  ++..++.|+.+       ..+.+||..+.+-. .+.....    ..... +++. .+++
T Consensus        90 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~----~r~~~-~~~~-~~~~  160 (318)
T 2woz_A           90 WVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI----KVYGH-NVIS-HNGM  160 (318)
T ss_dssp             EEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS----CEESC-EEEE-ETTE
T ss_pred             EEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC----ccccc-EEEE-ECCE
Confidence            5544433322222222222  56677777754       34788888765332 2221111    11111 1222 3677


Q ss_pred             eEEEeccC------CeEEEEecCCC
Q psy15191        240 YFLTISRD------GVCVVWGLGEP  258 (312)
Q Consensus       240 ~l~s~~~d------g~i~iwd~~~~  258 (312)
                      +++.|+.+      ..+.+||+.+.
T Consensus       161 iyv~GG~~~~~~~~~~~~~yd~~~~  185 (318)
T 2woz_A          161 IYCLGGKTDDKKCTNRVFIYNPKKG  185 (318)
T ss_dssp             EEEECCEESSSCBCCCEEEEETTTT
T ss_pred             EEEEcCCCCCCCccceEEEEcCCCC
Confidence            77777642      35888887654

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=94.44  E-value=2.3  Score=37.14  Aligned_cols=143  Identities=9%  Similarity=-0.096  Sum_probs=79.1

Q ss_pred             cceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        137 LGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      ..+.+++|.+.+..|+.+. ..+.|.. ++............-.....+++.+. ++.+++-+..+.|.+.++.......
T Consensus       349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~  428 (619)
T 3s94_A          349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI  428 (619)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence            3467889988655555544 4556655 44432222222222345678999874 4455555567899999988654433


Q ss_pred             EEeccCCCCcccceeeEEEEEcCC-CceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        214 LVACSDKTNGVHKRIIWGVAWSHD-SRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ....       .-....++++.|. |.++.+- +..+.|...++.....            .......-...+.|+++++
T Consensus       429 l~~~-------~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~------------~~l~~~~l~~P~GlalD~~  489 (619)
T 3s94_A          429 LISE-------DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR------------VVLVNTSLGWPNGLALDYD  489 (619)
T ss_dssp             EECT-------TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------------EEEECSSCSCEEEEEEETT
T ss_pred             EEEC-------CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc------------EEEEeCCCCCCeeeEEccc
Confidence            3321       2234678999997 4444443 2235666666543211            1111122345567777775


Q ss_pred             CCeEEEE
Q psy15191        292 GTLLASA  298 (312)
Q Consensus       292 ~~~l~s~  298 (312)
                      +..|..+
T Consensus       490 ~~~LY~a  496 (619)
T 3s94_A          490 EGKIYWG  496 (619)
T ss_dssp             TTEEEEE
T ss_pred             CCEEEEE
Confidence            5444444

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.09  E-value=1.7  Score=34.13  Aligned_cols=135  Identities=14%  Similarity=0.154  Sum_probs=64.6

Q ss_pred             CCCeEEEeecC--C-----eEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEecC------CeEEEEEccCCC
Q psy15191        147 RGDYIIAHGFQ--G-----SLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSG  210 (312)
Q Consensus       147 ~~~~l~~~~~~--~-----~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~  210 (312)
                      +++.++.|+.+  +     .+.. |..  +|.....+......- +++. .+++.++.|+.+      ..+.+||..+.+
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            56777777754  1     2333 444  455444333111111 1222 366677777642      358899988654


Q ss_pred             eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191        211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS  285 (312)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  285 (312)
                      - ..+.....    .......+.+  ++++++.|+.++     .+.+||+.+.          .|..+..+....... +
T Consensus       187 W-~~~~~~p~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~----------~W~~~~~~p~~r~~~-~  248 (318)
T 2woz_A          187 W-KDLAPMKT----PRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN----------KWEVMTEFPQERSSI-S  248 (318)
T ss_dssp             E-EEECCCSS----CCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC----------CEEECCCCSSCCBSC-E
T ss_pred             E-EECCCCCC----CcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC----------eEEECCCCCCcccce-E
Confidence            2 22221111    1111122222  667777776532     5778887654          243333332211111 1


Q ss_pred             EEeccCCCeEEEEecCC
Q psy15191        286 LAASHDGTLLASACKAT  302 (312)
Q Consensus       286 ~~~s~~~~~l~s~s~d~  302 (312)
                      + ...++++++.|+.+.
T Consensus       249 ~-~~~~~~i~v~GG~~~  264 (318)
T 2woz_A          249 L-VSLAGSLYAIGGFAM  264 (318)
T ss_dssp             E-EEETTEEEEECCBCC
T ss_pred             E-EEECCEEEEECCeec
Confidence            2 224678888887654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=93.88  E-value=2  Score=34.30  Aligned_cols=88  Identities=7%  Similarity=-0.034  Sum_probs=40.5

Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc------CCeEEEEecCCCCCCcccccccccce
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR------DGVCVVWGLGEPPTEEDLVQNTLWPE  272 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~  272 (312)
                      ..+.+||..+.+-...-..+..    .... .+++.. ++++++.|+.      ...+.+||+...        ...|..
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~----~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~--------~~~W~~  233 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWY----GTAG-AAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGN--------NLKWNK  233 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSC----CCBS-CEEEEE-TTEEEEECCEEETTEECCCEEEEECC-----------CEEEE
T ss_pred             ccEEEEeCCCCcEEECCCCCCC----Cccc-ccEEEE-CCEEEEEeeecCCCcccCceEEEEecCC--------CCcEEe
Confidence            5788999886543332221111    0110 122222 6677777764      235677776322        223444


Q ss_pred             eEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        273 VQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       273 ~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      +..+..........+...++++++.|+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~iyv~GG~  261 (357)
T 2uvk_A          234 LAPVSSPDGVAGGFAGISNDSLIFAGGA  261 (357)
T ss_dssp             CCCSSTTTCCBSCEEEEETTEEEEECCE
T ss_pred             cCCCCCCcccccceEEEECCEEEEEcCc
Confidence            4333222211122233456788888864

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=93.57  E-value=3.8  Score=36.43  Aligned_cols=183  Identities=9%  Similarity=0.067  Sum_probs=93.5

Q ss_pred             CceEEEecCC----CcEEEeeecCCcccccc-c-----ccC--------CC--CCceEEEEeCC------CcEEEEcCCC
Q psy15191         65 HKDLVSCSLD----KTAILWKYVSEGNYLPY-H-----MRD--------DS--KQLHLLSCSMD------KSIIVWAPDP  118 (312)
Q Consensus        65 ~~~l~s~~~d----g~i~vw~~~~~~~~~~~-~-----~~~--------~~--~~~~l~~~~~d------~~i~i~d~~~  118 (312)
                      +.+++.|+.+    ..+.+||..+.....+. .     .+.        .-  ++..++.|+.+      ..+.+||+.+
T Consensus       398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t  477 (695)
T 2zwa_A          398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT  477 (695)
T ss_dssp             SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred             CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence            5677777754    35778888776542222 1     111        01  44455666543      3467788776


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC--eEEE-ecc--cCceeee---ecccCCceeEEEECCC-C
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG--SLHL-DVT--TWKQIQT---LPCHQLTITQLAFSPD-D  189 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~i~~-d~~--~~~~~~~---~~~~~~~v~~~~~~~~-~  189 (312)
                      .  .+.....   ++.... -.+++.-.+++.++.|+.++  .+.+ |..  +|.....   ..........+.+..+ +
T Consensus       478 ~--~W~~~~~---~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~  551 (695)
T 2zwa_A          478 R--EWSMIKS---LSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK  551 (695)
T ss_dssp             T--EEEECCC---CSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred             C--cEEECCC---CCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence            3  3322211   111111 12233334788888887654  3444 544  4555443   2212222333555554 6


Q ss_pred             CEEEEEec--C-----CeEEEEEccCCCe-----EEEEec-cCCCCcccceeeEEEEEcCCCceEEEeccC--------C
Q psy15191        190 THLVSVSR--D-----RRWGLYKRQSSGR-----LSLVAC-SDKTNGVHKRIIWGVAWSHDSRYFLTISRD--------G  248 (312)
Q Consensus       190 ~~l~~~~~--d-----~~i~~wd~~~~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g  248 (312)
                      ..++.|+.  +     ..+.+||+.+..-     ...+.. +..    ...... ++...++++++.|+.+        .
T Consensus       552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~----~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~  626 (695)
T 2zwa_A          552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF----QRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTN  626 (695)
T ss_dssp             EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG----CCBSCE-EEEEETTEEEEECCBCSSCCCCTTT
T ss_pred             EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC----Ccccce-EEEeCCCEEEEECCccCCCCCCCCC
Confidence            67777765  2     4589999987761     222222 101    111112 2233337777777743        4


Q ss_pred             eEEEEecCCC
Q psy15191        249 VCVVWGLGEP  258 (312)
Q Consensus       249 ~i~iwd~~~~  258 (312)
                      .|.+||+.+.
T Consensus       627 ~v~~yd~~t~  636 (695)
T 2zwa_A          627 SIISLDPLSE  636 (695)
T ss_dssp             SEEEEETTTT
T ss_pred             eEEEEECCCC
Confidence            5888988765

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=93.24  E-value=2  Score=36.70  Aligned_cols=117  Identities=14%  Similarity=0.053  Sum_probs=69.8

Q ss_pred             ceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCe-----E----EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191        179 TITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGR-----L----SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG  248 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~-----~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg  248 (312)
                      ....+..+|||++++.++ .+.++.++|++....     +    ..+.....    ..-.....+|.++|....+.--|.
T Consensus       324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e----~GlGPlHt~Fd~~G~aYTtlfidS  399 (638)
T 3sbq_A          324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE----LGLGPLHTTFDGRGNAYTTLFIDS  399 (638)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB----CCSCEEEEEECSSSEEEEEETTTT
T ss_pred             CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc----CCCcccEEEECCCCceEeeeeecc
Confidence            345688999999988765 578899999985211     0    00000000    233456789999996666777899


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCcceeEE-----EeccCCCeEEEEecC
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL-----AASHDGTLLASACKA  301 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~s~~~~~l~s~s~d  301 (312)
                      .|.-|++......  ....+.++.+.++.-|-.+-.-.     .-.|+|++|++...=
T Consensus       400 qvvkWni~~a~~~--~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~  455 (638)
T 3sbq_A          400 QVVKWNMEEAVRA--YKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF  455 (638)
T ss_dssp             EEEEEEHHHHHHH--HTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred             eEEEEeccHHHHH--hcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence            9999998653100  00011123555555444332211     225889999988654

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.63  E-value=8  Score=35.82  Aligned_cols=39  Identities=18%  Similarity=0.194  Sum_probs=32.9

Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .+.+++..++..++++-+.|+++|+|++.+++.+.....
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL  275 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL  275 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence            466777888888999999999999999999887776543

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=91.62  E-value=4  Score=31.92  Aligned_cols=101  Identities=15%  Similarity=0.144  Sum_probs=55.6

Q ss_pred             EEECCCCCeEEEee--cCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEE
Q psy15191        142 CKFGPRGDYIIAHG--FQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLV  215 (312)
Q Consensus       142 ~~~~~~~~~l~~~~--~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~  215 (312)
                      ..++++++.|+-..  .++  .|.. ++..-+ ...+..+..    ..++|+++.|+-.+. ...|..-++........+
T Consensus       109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~  183 (302)
T 3s25_A          109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY  183 (302)
T ss_dssp             EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred             cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence            36778888888765  233  3433 554322 223332322    456778888776554 567888887755444332


Q ss_pred             eccCCCCcccceeeEEEEEcCCCceEEEeccC--CeEEEEecCCC
Q psy15191        216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD--GVCVVWGLGEP  258 (312)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~  258 (312)
                      ..        .  .. ..+.|++.+|+-...+  ..|..-++...
T Consensus       184 ~~--------~--~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~  217 (302)
T 3s25_A          184 DC--------N--CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP  217 (302)
T ss_dssp             CS--------C--EE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred             CC--------C--cc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence            21        1  11 2355888888765433  35555555443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=91.24  E-value=7.1  Score=34.11  Aligned_cols=191  Identities=12%  Similarity=-0.012  Sum_probs=103.0

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc--------cccCCC-CCceEEEEeCCCcEEEEcCCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY--------HMRDDS-KQLHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--------~~~~~~-~~~~l~~~~~d~~i~i~d~~~  118 (312)
                      ..+..++|.+.     ++.++++-...+.|+.++++......+.        -++... .+.++++-+..+.|.+.++..
T Consensus       349 ~~~~~ld~d~~-----~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G  423 (619)
T 3s94_A          349 RHAIAIDYDPV-----EGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG  423 (619)
T ss_dssp             SSEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CccEEEEEEcC-----CCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence            45778899875     2455556556788888887754331111        111121 233444445566777777664


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV  195 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  195 (312)
                      .....+.       ...-....++++.|....|+.+..  ...|.. ++.--.........-...+.|++++++..|+.+
T Consensus       424 ~~~~~l~-------~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~a  496 (619)
T 3s94_A          424 TMRKILI-------SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWG  496 (619)
T ss_dssp             CSCEEEE-------CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             CeEEEEE-------ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEE
Confidence            3221111       122345789999997555554432  345544 333222211122234567889999877666666


Q ss_pred             e-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        196 S-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       196 ~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      . ..+.|..+++..............    |   ..+++...+ .++.+-...+.|...|..++
T Consensus       497 D~~~~~I~~~~~dG~~~~~~~~~~l~----~---P~glav~~~-~ly~tD~~~~~I~~~~k~~g  552 (619)
T 3s94_A          497 DAKTDKIEVMNTDGTGRRVLVEDKIP----H---IFGFTLLGD-YVYWTDWQRRSIERVHKRSA  552 (619)
T ss_dssp             ETTTTEEEEEESSSCCCEEEEECCCC----S---SCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred             ECCCCEEEEEecCCCceEEEeccCCC----C---cEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence            4 457899999876554433332111    2   234555433 44444445566777776665

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=90.67  E-value=9  Score=34.31  Aligned_cols=112  Identities=13%  Similarity=0.088  Sum_probs=64.6

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .|.++...+++..|..|+..|..+++..+.+...........|.++...++|.+.+ |+. +-+.+++..+.........
T Consensus       192 ~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~  269 (758)
T 3ott_A          192 FVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHD  269 (758)
T ss_dssp             CEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCC
T ss_pred             eeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcC
Confidence            47788877777766666665655556655443322111234688888888887554 454 4588888765443222111


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ...........|.++....+|.+.+.. ..| +.++
T Consensus       270 ~~~~~~l~~~~i~~i~~D~~g~lWiGT-~~G-l~~~  303 (758)
T 3ott_A          270 SRNIQSLTNNIIWNIFADQEHNIWLGT-DYG-ISLS  303 (758)
T ss_dssp             TTCTTSCSCSCEEEEEECTTCCEEEEE-SSS-EEEE
T ss_pred             CCCcCcCCcCeEEEEEEcCCCCEEEEe-CCc-cccc
Confidence            111111134568899888888766644 456 5444

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=90.64  E-value=13  Score=36.08  Aligned_cols=189  Identities=10%  Similarity=0.098  Sum_probs=100.7

Q ss_pred             CceEEEecCCCcEEEeeecCCcccc-------cccccC-CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee-cccCCC
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV-GEVGGN  135 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~  135 (312)
                      .+.+|.=+ ..+++|+|+++...+.       +.+-.| ++.  .|+-. .+..|.-|++.... .....+.. ..+  .
T Consensus        77 ~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~--~l~lV-T~~aVyHW~~~~~s-~P~k~fdR~~~L--~  149 (1630)
T 1xi4_A           77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALV-TDNAVYHWSMEGES-QPVKMFDRHSSL--A  149 (1630)
T ss_pred             cceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCC--eeEEE-cCCeEEEeccCCCC-ccHHHHhcchhc--c
Confidence            56665544 6789999998876632       222222 333  22222 24569999996421 11111111 111  1


Q ss_pred             ccceeEEEECCCCCeEEEeec-------CCeEEEecccCceeeeecccCCceeEEEECC--C-CCEEEEEec---CCeEE
Q psy15191        136 TLGFYGCKFGPRGDYIIAHGF-------QGSLHLDVTTWKQIQTLPCHQLTITQLAFSP--D-DTHLVSVSR---DRRWG  202 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~~-------~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---d~~i~  202 (312)
                      ...|..-..+++.++++..+-       .|.+.+-....+..+.+.+|......+....  . ...++.+..   .+.++
T Consensus       150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh  229 (1630)
T 1xi4_A          150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH  229 (1630)
T ss_pred             cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence            456777788899999775442       3555551111223333446666555444431  2 223333322   26888


Q ss_pred             EEEccCC-CeEEEEec-cCCCCc---ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        203 LYKRQSS-GRLSLVAC-SDKTNG---VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       203 ~wd~~~~-~~~~~~~~-~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      |-++... .....+.. .....+   .......++..++.-..+..-+.-|.|++||+.++..
T Consensus       230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~  292 (1630)
T 1xi4_A          230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC  292 (1630)
T ss_pred             EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh
Confidence            8888543 10000000 000000   0233455677788778888888999999999999853

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=89.61  E-value=7.3  Score=31.60  Aligned_cols=190  Identities=7%  Similarity=0.021  Sum_probs=101.1

Q ss_pred             EEEEEeCCCC--ceEEEEccc------cCcEEEEEEe-cCcC-cCCCCceEEEecCCCcEEEeeecCCcccccccccCCC
Q psy15191         28 MAVKWNGEGG--KVLYTLTNH------KSKVMAVKWV-LNTS-LDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDS   97 (312)
Q Consensus        28 ~~~~w~~~~~--~~~~~~~~h------~~~v~~~~~~-~~~~-~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~   97 (312)
                      .-+.||..+.  ++++++.-.      ..-+..+++. .... -..++...++=+...-|.|+|+.+++...+....+.+
T Consensus       124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p  203 (381)
T 3q6k_A          124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA  203 (381)
T ss_dssp             EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred             eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence            4466898888  888877532      2346777776 1100 0011223344445677888998888876655433333


Q ss_pred             CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC----CCeEEEeecCC-eE-EE---ecccCc
Q psy15191         98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR----GDYIIAHGFQG-SL-HL---DVTTWK  168 (312)
Q Consensus        98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~-~i-~~---d~~~~~  168 (312)
                      +....+  .-+|.-..|                     ...+..++++|+    ++.|+-..-.+ .+ .+   .+++..
T Consensus       204 d~~~~~--~i~G~~~~~---------------------~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~  260 (381)
T 3q6k_A          204 ERPTKF--DYGGKEYEF---------------------KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKG  260 (381)
T ss_dssp             CSCEEE--EETTEEEEE---------------------CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTT
T ss_pred             ccCcce--EECCEEeEe---------------------ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcc
Confidence            311111  111211111                     234788999997    77777665444 22 23   222222


Q ss_pred             eeeeec--ccC---CceeEEEEC-CCCCEEEEEecCCeEEEEEccC-C---CeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191        169 QIQTLP--CHQ---LTITQLAFS-PDDTHLVSVSRDRRWGLYKRQS-S---GRLSLVACSDKTNGVHKRIIWGVAWSHDS  238 (312)
Q Consensus       169 ~~~~~~--~~~---~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~-~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  238 (312)
                      ....++  +..   ..-..+++. .+|..+++--....|..|+..+ .   +....+....     .-..+..+.+.++|
T Consensus       261 ~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-----~l~~pd~~~i~~~g  335 (381)
T 3q6k_A          261 GKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-----RFVFGTDISVDSKG  335 (381)
T ss_dssp             CCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-----TCCSEEEEEECTTS
T ss_pred             hhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-----CccccCeEEECCCC
Confidence            222111  222   334456775 6788788777889999999875 1   1223322211     11235667777777


Q ss_pred             ceEEEec
Q psy15191        239 RYFLTIS  245 (312)
Q Consensus       239 ~~l~s~~  245 (312)
                      .+.+..+
T Consensus       336 ~Lwv~sn  342 (381)
T 3q6k_A          336 GLWFMSN  342 (381)
T ss_dssp             CEEEEEC
T ss_pred             eEEEEEC
Confidence            6555543

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=89.38  E-value=7.6  Score=31.50  Aligned_cols=115  Identities=7%  Similarity=-0.043  Sum_probs=58.6

Q ss_pred             ccceeEEEECC-CCCeEEEeecCC----eEEE--e-cccCceeeee---cc--------cCCceeEEEECC-C-CCEEEE
Q psy15191        136 TLGFYGCKFGP-RGDYIIAHGFQG----SLHL--D-VTTWKQIQTL---PC--------HQLTITQLAFSP-D-DTHLVS  194 (312)
Q Consensus       136 ~~~v~~~~~~~-~~~~l~~~~~~~----~i~~--d-~~~~~~~~~~---~~--------~~~~v~~~~~~~-~-~~~l~~  194 (312)
                      ...+.++++.| +...+.+++..|    .|..  | -.+|+.....   ..        ....|.++++.| + ...+..
T Consensus        54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~  133 (394)
T 3b7f_A           54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA  133 (394)
T ss_dssp             TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred             CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence            34689999998 344455555555    4444  3 4567665421   11        113577899987 2 456666


Q ss_pred             EecCCeEEEEEccCCCeEEEEeccCC-CC-----------cccceeeEEEEEcCC-CceEEEeccCCeEE
Q psy15191        195 VSRDRRWGLYKRQSSGRLSLVACSDK-TN-----------GVHKRIIWGVAWSHD-SRYFLTISRDGVCV  251 (312)
Q Consensus       195 ~~~d~~i~~wd~~~~~~~~~~~~~~~-~~-----------~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~  251 (312)
                      ++..+.|...+ ..++....+..... ..           ......+.++.++|. ...|..+..++.|.
T Consensus       134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~  202 (394)
T 3b7f_A          134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVF  202 (394)
T ss_dssp             EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEE
T ss_pred             EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEE
Confidence            66666554432 12233333221100 00           002345788999883 34444454444443

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=87.70  E-value=9.9  Score=30.80  Aligned_cols=102  Identities=12%  Similarity=0.107  Sum_probs=52.0

Q ss_pred             CeEEEeecCCeEEE--ec--ccCceeeeecccCCceeEEEECC-CCCEEEEEecCC----eEEEEEccCCCeEEEEeccC
Q psy15191        149 DYIIAHGFQGSLHL--DV--TTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDR----RWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       149 ~~l~~~~~~~~i~~--d~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~  219 (312)
                      ..|.++...|.+++  +.  .+|....... ....|.+|+++| +...|..++..|    .|... ...++....+....
T Consensus        23 g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~-~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~  100 (394)
T 3b7f_A           23 VMLLVATIKGAWFLASDPARRTWELRGPVF-LGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP  100 (394)
T ss_dssp             CEEEEEETTEEEEEEECTTSCSEEEEEEES-TTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred             CEEEEEecCceEEEECCCCCCCceECCccC-CCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence            45777777776655  23  4676653222 345799999998 334455555554    34332 22233333332110


Q ss_pred             CCCcc-------cceeeEEEEEcCC--CceEEEeccCCeEEE
Q psy15191        220 KTNGV-------HKRIIWGVAWSHD--SRYFLTISRDGVCVV  252 (312)
Q Consensus       220 ~~~~~-------~~~~v~~~~~~~~--~~~l~s~~~dg~i~i  252 (312)
                      .....       ....|.++++.|.  ...|..+...+.|..
T Consensus       101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~  142 (394)
T 3b7f_A          101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFR  142 (394)
T ss_dssp             CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEE
T ss_pred             cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEE
Confidence            00000       1135778999872  455655655665443

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=87.21  E-value=2.6  Score=33.60  Aligned_cols=113  Identities=8%  Similarity=-0.015  Sum_probs=62.9

Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE--CC-CCCeEEEe-ecCCeEEE-ecccCceeeeec
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF--GP-RGDYIIAH-GFQGSLHL-DVTTWKQIQTLP  174 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~~~l~~~-~~~~~i~~-d~~~~~~~~~~~  174 (312)
                      ..++.++.||.|.-+|..+++..+.....  .    ..++....-  .+ ++..++.. +.||.+.. +..++.....+.
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~   84 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--N----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS   84 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG--G----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC--c----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence            47899999999999999997776655432  0    001111000  01 22223332 46777766 554442222221


Q ss_pred             ----ccCCceeE---EEE-C----CCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        175 ----CHQLTITQ---LAF-S----PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       175 ----~~~~~v~~---~~~-~----~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                          ....++..   ... .    ..+..+++++.+|.+...|+++++.+..+...
T Consensus        85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~  140 (339)
T 2be1_A           85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG  140 (339)
T ss_dssp             HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred             cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence                11112211   000 0    13557889999999999999998888777643

>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*

Probab=84.49  E-value=23  Score=32.01  Aligned_cols=154  Identities=12%  Similarity=0.130  Sum_probs=78.9

Q ss_pred             ccceeEEEECCC-CCeEEEeecCCeEEE---ecccCceeeeecc----cCCceeEEEECCC-CCEEEEEecCCe----EE
Q psy15191        136 TLGFYGCKFGPR-GDYIIAHGFQGSLHL---DVTTWKQIQTLPC----HQLTITQLAFSPD-DTHLVSVSRDRR----WG  202 (312)
Q Consensus       136 ~~~v~~~~~~~~-~~~l~~~~~~~~i~~---d~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~~d~~----i~  202 (312)
                      ...|.+++++|. ...++++...+.|..   .-++|+.+.....    ....+..|+++|. .+.++.+..+..    -.
T Consensus        14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~   93 (789)
T 1sqj_A           14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA   93 (789)
T ss_dssp             CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred             CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence            457999999995 456677776666655   3457876543211    2346999999984 344444432211    33


Q ss_pred             EEEc-cCCCeEEEEeccCCCC--cccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-
Q psy15191        203 LYKR-QSSGRLSLVACSDKTN--GVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-  277 (312)
Q Consensus       203 ~wd~-~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-  277 (312)
                      ||.. ..++....+.......  ......+..++++|. ...++.+...+.  ||....+        .+.|+.+..+. 
T Consensus        94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~Dg--------G~TW~~~~~~~~  163 (789)
T 1sqj_A           94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDR--------AKTWTNVTSIPD  163 (789)
T ss_dssp             EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESST--------TSSCEEETTSCC
T ss_pred             EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCC--------CcccCCCccCcc
Confidence            4433 3344444443221100  001112456777774 345555553333  4544444        44555443221 


Q ss_pred             --ccCcceeEEEeccC-CCeEEEEe
Q psy15191        278 --GHGYEIYSLAASHD-GTLLASAC  299 (312)
Q Consensus       278 --~~~~~v~~~~~s~~-~~~l~s~s  299 (312)
                        .....+..+.++|. +..|..+.
T Consensus       164 ~~~~~~~~~~i~~~p~~~~~~~~~~  188 (789)
T 1sqj_A          164 AFTNGIGYTSVIFDPERNGTIYASA  188 (789)
T ss_dssp             CCSTTTCEEEEEECTTSTTCEEEEE
T ss_pred             ccCCCCCeEEEEECCCCCCEEEEEE
Confidence              11245778888874 34454443

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=83.62  E-value=6.5  Score=34.05  Aligned_cols=59  Identities=10%  Similarity=0.074  Sum_probs=40.7

Q ss_pred             eeEEEECCCCCEEEEEecC------------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        180 ITQLAFSPDDTHLVSVSRD------------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                      .-.|+|+|.|++++.-..+            ..+.+.+..+++....+..+      ....++.++|+||++.|+..
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P------~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------IGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC------TTCEEEEEEECTTSSEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC------CCccCcCeeECCCCCEEEEE
Confidence            4678999999866553221            23555666666666666654      55679999999999887654

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=83.08  E-value=25  Score=31.41  Aligned_cols=222  Identities=9%  Similarity=-0.036  Sum_probs=110.0

Q ss_pred             EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcc
Q psy15191         50 VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG  121 (312)
Q Consensus        50 v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  121 (312)
                      |.++...++      +..|..|.. +-+..+|..+++..        .+..+....++ .|..|+.+ -+.+++..+.+.
T Consensus       193 i~~i~~d~~------~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigT~~-Gl~~~~~~~~~~  263 (758)
T 3ott_A          193 VNSLLEDTT------RQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG-DLLAGTDN-GLYVYHNDTTPL  263 (758)
T ss_dssp             EEEEEEETT------TTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC-CEEEEETT-EEEEECCTTSCC
T ss_pred             eEEEEEECC------CCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC-CEEEEeCC-ceeEEecCCCcE
Confidence            677766554      554444443 34777776655321        11222223344 34445544 477888765332


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEec-ccCceeeee----cccCCceeEEEECCCCCEEEEEe
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDV-TTWKQIQTL----PCHQLTITQLAFSPDDTHLVSVS  196 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~-~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~  196 (312)
                      ............-....|.++....+|. |..|+..|...+.. ...+.....    ......|.++.-.++|.+.+ |+
T Consensus       264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt  341 (758)
T 3ott_A          264 QHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYGISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GG  341 (758)
T ss_dssp             EEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSSEEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EE
T ss_pred             EEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCcccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-ee
Confidence            2111100000011234588888887776 44555567433311 111111100    01234688888888887544 45


Q ss_pred             cCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE
Q psy15191        197 RDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ  274 (312)
Q Consensus       197 ~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  274 (312)
                      .+| +..++..+..  ....+.............|.++.-.++|++.+..  ++-|..||..++.             ..
T Consensus       342 ~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt--~~GL~~~~~~~~~-------------~~  405 (758)
T 3ott_A          342 ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT--DGSINRYDYATRQ-------------FI  405 (758)
T ss_dssp             TTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTE-------------EE
T ss_pred             CCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe--CCcHhhcCcCCCc-------------EE
Confidence            554 6666654321  2222221111111123458888888888866643  3468889876541             11


Q ss_pred             Eee--c-----cCcceeEEEeccCCCeEEEE
Q psy15191        275 KLY--G-----HGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       275 ~~~--~-----~~~~v~~~~~s~~~~~l~s~  298 (312)
                      .+.  .     ....|.++.-.++|.+.+..
T Consensus       406 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT  436 (758)
T 3ott_A          406 HYNIVDNTGTYNTNWTYYIFEDTAGQLWIST  436 (758)
T ss_dssp             EEEEECCC--CBSSSEEEEEECTTSEEEEEE
T ss_pred             EeecCCCcCCCCCceEEEEEEcCCCCEEEEE
Confidence            111  0     23457788877777766543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=83.00  E-value=20  Score=30.05  Aligned_cols=30  Identities=3%  Similarity=-0.133  Sum_probs=22.0

Q ss_pred             CcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeec
Q psy15191         48 SKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYV   83 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~   83 (312)
                      ...+.|+|.|+      +. .|+.+...|.|++++..
T Consensus        14 ~~P~~~a~~pd------G~~rl~V~er~G~i~~~~~~   44 (463)
T 2wg3_C           14 RQPVGALHSGD------GSQRLFILEKEGYVKILTPE   44 (463)
T ss_dssp             SSEEEEECCSS------SSCCEEEEETTTEEEEECTT
T ss_pred             CCceEEEECCC------CCeEEEEEeCCceEEEEeCC
Confidence            46788999998      64 35555678999999753

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=82.11  E-value=40  Score=32.97  Aligned_cols=158  Identities=13%  Similarity=0.017  Sum_probs=85.3

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEec-------CCCcEEEeeecCCccc-----cccc----ccCCCCCceEEE-EeC---
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCS-------LDKTAILWKYVSEGNY-----LPYH----MRDDSKQLHLLS-CSM---  107 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~-------~dg~i~vw~~~~~~~~-----~~~~----~~~~~~~~~l~~-~~~---  107 (312)
                      ..|..-+.+++      .++++..|       ..|.+++|..+.+...     ...|    .+..+....+++ +..   
T Consensus       151 ~QIinY~~d~~------~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~  224 (1630)
T 1xi4_A          151 CQIINYRTDAK------QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA  224 (1630)
T ss_pred             CeeEEeeeCCC------CCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence            34444444444      77766433       4588999998876541     1111    111222222333 222   


Q ss_pred             CCcEEEEcCCCC-cceeeeeee---ec-ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191        108 DKSIIVWAPDPT-TGLWLETAR---VG-EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT  181 (312)
Q Consensus       108 d~~i~i~d~~~~-~~~~~~~~~---~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~  181 (312)
                      .+.++|.++... .+......+   +. +......-..++..++.-..+..-+.-|.+++ |+.|...+..-+-....|.
T Consensus       225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF  304 (1630)
T 1xi4_A          225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF  304 (1630)
T ss_pred             CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceE
Confidence            378999988653 111111101   00 00112333456778888788888899999999 8888776655444445555


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGR  211 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  211 (312)
                      ..+-++...-++.....|.|.--.+.....
T Consensus       305 ~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i  334 (1630)
T 1xi4_A          305 VTAPHEATAGIIGVNRKGQVLSVCVEEENI  334 (1630)
T ss_pred             EeccCCCCCceEEEcCCceEEEEEEccchh
Confidence            554444434455555666666555554433

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=82.05  E-value=12  Score=32.26  Aligned_cols=60  Identities=8%  Similarity=0.067  Sum_probs=40.3

Q ss_pred             ceeEEEECCCCCEEEEEec------------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191        179 TITQLAFSPDDTHLVSVSR------------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI  244 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  244 (312)
                      ....|.|+++|.+.+....            ...+..++..+++....+..+      ....++.++|+||++.|+.+
T Consensus       477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P------~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------IGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC------TTCEEEEEEECTTSSEEEEE
T ss_pred             CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC------CCccccCCEECCCCCEEEEE
Confidence            4568999999987763221            125666666656655554432      34568999999999988765

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=80.95  E-value=18  Score=28.20  Aligned_cols=99  Identities=10%  Similarity=0.059  Sum_probs=52.4

Q ss_pred             EECCCCCeEEEeecC--------------CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cC--CeEEE
Q psy15191        143 KFGPRGDYIIAHGFQ--------------GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RD--RRWGL  203 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~--------------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d--~~i~~  203 (312)
                      -+++++.+|+-+...              ..|+. ++...+.. .+.  ...  ...|++++++|+-..  .+  ..|+.
T Consensus        59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~  133 (302)
T 3s25_A           59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLD--PDP--CIYASLIGNYIYYLHYDTQTATSLYR  133 (302)
T ss_dssp             EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEE--CSC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred             eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eee--cCC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence            456788887766543              23444 44433322 121  111  236777888888765  33  44555


Q ss_pred             EEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCCC
Q psy15191        204 YKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEP  258 (312)
Q Consensus       204 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~  258 (312)
                      -++..........        +.  +  .+++|+++.|+-.+. ...|.+-++...
T Consensus       134 ~~~dGs~~~~lt~--------~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~  177 (302)
T 3s25_A          134 IRIDGEEKKKIKN--------HY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQ  177 (302)
T ss_dssp             EETTSCCCEEEES--------SC--C--CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred             EECCCCCeEEEeC--------CC--c--eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence            5665433333222        11  1  346777877775554 456777766544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	312
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-15
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-13
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-12
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.003
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-10
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-08
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	9e-06
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	9e-08
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	2e-07
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	6e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	7e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-06
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-06
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.003
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.003
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.004

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 78.2 bits (191), Expect = 5e-17
 Identities = 43/305 (14%), Positives = 77/305 (25%), Gaps = 39/305 (12%)

Query: 15  KVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKW 55
           +   TL  H +K+ A+ W  +                       ++ +    S VM   +
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105

Query: 56  VLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWA 115
             + +          CS     +  +  +                               
Sbjct: 106 APSGNYVACGGLDNICS--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163

Query: 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP 174
                       +     G+T         P     ++     S  L DV      QT  
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223

Query: 175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW 234
            H+  I  + F P+     + S D    L+  ++            ++      I  V++
Sbjct: 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-----LMTYSHDNIICGITSVSF 278

Query: 235 SHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL 294
           S   R  L    D  C VW   +                  L GH   +  L  + DG  
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALK------------ADRAGVLAGHDNRVSCLGVTDDGMA 326

Query: 295 LASAC 299
           +A+  
Sbjct: 327 VATGS 331

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.5 bits (145), Expect = 5e-11
 Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 17/166 (10%)

Query: 91  YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY 150
             +         +S + D S  +W  D   G+  +T       G+        F P G+ 
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLW--DVREGMCRQTFT-----GHESDINAICFFPNGNA 240

Query: 151 IIAHGFQGSLHLDVTTWKQIQTLPCHQL---TITQLAFSPDDTHLVSVSRDRRWGLYKRQ 207
                   +  L      Q      H      IT ++FS     L++   D    ++   
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300

Query: 208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
            + R             H   +  +  + D     T S D    +W
Sbjct: 301 KADRA-------GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (140), Expect = 2e-10
 Identities = 24/170 (14%), Positives = 46/170 (27%), Gaps = 46/170 (27%)

Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W+   G    T T H+S + A+ +       P      + S D T  L+   ++   + Y
Sbjct: 211 WDVREGMCRQTFTGHESDINAICF------FPNGNAFATGSDDATCRLFDLRADQELMTY 264

Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
              +                                          G     F   G  +
Sbjct: 265 SHDNIIC---------------------------------------GITSVSFSKSGRLL 285

Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR 200
           +A     + ++ D     +   L  H   ++ L  + D   + + S D  
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.6 bits (96), Expect = 7e-05
 Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 149 DYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS 208
           D  ++        +     +  +TL  H   I  + +  D   LVS S+D +  ++   +
Sbjct: 27  DATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT 86

Query: 209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
           + ++           +    +   A++    Y      D +C ++
Sbjct: 87  TNKV-------HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.1 bits (175), Expect = 5e-15
 Identities = 47/318 (14%), Positives = 94/318 (29%), Gaps = 56/318 (17%)

Query: 18  YTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKW--V 56
           Y L+ H+S V  V                    W+ E G    TL  H   V  + +   
Sbjct: 11  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70

Query: 57  LNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAP 116
                       +     +     + +   ++    +       H++S S DK+I +W  
Sbjct: 71  GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130

Query: 117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC 175
                +           G+       +    G  I +     ++ +  V T +    L  
Sbjct: 131 QTGYCVK-------TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 183

Query: 176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV----------- 224
           H+  +  ++++P+ ++  S+S        K    G   L    DKT  +           
Sbjct: 184 HRHVVECISWAPESSYS-SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242

Query: 225 ---HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY 281
              H   + GV +    ++ L+ + D    VW                   ++ L  H +
Sbjct: 243 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN------------KRCMKTLNAHEH 290

Query: 282 EIYSLAASHDGTLLASAC 299
            + SL        + +  
Sbjct: 291 FVTSLDFHKTAPYVVTGS 308

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.3 bits (160), Expect = 5e-13
 Identities = 44/279 (15%), Positives = 92/279 (32%), Gaps = 42/279 (15%)

Query: 10  NGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTS--------- 60
           + E G    TL  H   V  + ++  G  +     +   K+   +               
Sbjct: 45  DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 104

Query: 61  ----LDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH--------LLSCSMD 108
               + P    +VS S DKT  +W+  +      +    +  ++         + SCS D
Sbjct: 105 SSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 164

Query: 109 KSIIVWA-------------PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG 155
           +++ VW                    +               G    K G  G ++++  
Sbjct: 165 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 224

Query: 156 FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL 214
              ++ + DV+T   + TL  H   +  + F      ++S + D+   ++  ++   +  
Sbjct: 225 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM-- 282

Query: 215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
                KT   H+  +  + +   + Y +T S D    VW
Sbjct: 283 -----KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.6 bits (153), Expect = 4e-12
 Identities = 41/270 (15%), Positives = 84/270 (31%), Gaps = 23/270 (8%)

Query: 41  YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDS-KQ 99
           Y L+ H+S V  V +       P    +VS S D T  +W Y +           DS + 
Sbjct: 11  YALSGHRSPVTRVIF------HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

Query: 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS 159
           +         +            +     +  + G+          P GD+I++     +
Sbjct: 65  ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124

Query: 160 LHLD-VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218
           + +  V T   ++T   H+  +  +  + D T + S S D+   ++   +          
Sbjct: 125 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-------EC 177

Query: 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE--------DLVQNTLW 270
                 H+ ++  ++W+ +S Y       G          P            +   +  
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 237

Query: 271 PEVQKLYGHGYEIYSLAASHDGTLLASACK 300
             +  L GH   +  +     G  + S   
Sbjct: 238 MCLMTLVGHDNWVRGVLFHSGGKFILSCAD 267

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.7 bits (148), Expect = 2e-11
 Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 9/192 (4%)

Query: 15  KVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD 74
             + T T H+  V  V+ N +G  +     +   +V  V      +   EH+ +V C   
Sbjct: 134 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193

Query: 75  KTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG 134
                +  +SE                LLS S DK+I +W  D +TG+ L T       G
Sbjct: 194 APESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMW--DVSTGMCLMTLV-----G 245

Query: 135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLV 193
           +     G  F   G +I++     +L + D    + ++TL  H+  +T L F     ++V
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 305

Query: 194 SVSRDRRWGLYK 205
           + S D+   +++
Sbjct: 306 TGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (82), Expect = 0.003
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 47/167 (28%)

Query: 168 KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL-SLVACSDKTNGVH- 225
            +   L  H+  +T++ F P  + +VS S D    ++  ++     +L   +D    +  
Sbjct: 8   PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 67

Query: 226 ---------------------------------KRIIWGVAWSHDSRYFLTISRDGVCVV 252
                                               +  V+   +  + ++ SRD    +
Sbjct: 68  DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 127

Query: 253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
           W +                 V+   GH   +  +  + DGTL+AS  
Sbjct: 128 WEVQT------------GYCVKTFTGHREWVRMVRPNQDGTLIASCS 162

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.7 bits (140), Expect = 2e-10
 Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 10/284 (3%)

Query: 17  LYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT 76
           L+   +H S V  VK++ +G + L T  N  ++V     V + SL     D  + + D  
Sbjct: 55  LHKSLDHTSVVCCVKFSNDG-EYLATGCNKTTQVY---RVSDGSLVARLSDDSAANKDPE 110

Query: 77  AILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT 136
            +        +     +        L + + D+ I +W  +    + +            
Sbjct: 111 NLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH------EQ 164

Query: 137 LGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196
             +    F      +   G +     D+ T +   TL       T      D  ++ + S
Sbjct: 165 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 224

Query: 197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256
            DR   ++  ++   +  +   +++   HK  ++ V ++ D +  ++ S D    +W L 
Sbjct: 225 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284

Query: 257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300
               + D              GH   + S+A + +   + S  K
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 328

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.3 bits (134), Expect = 1e-09
 Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 16/188 (8%)

Query: 80  WKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF 139
              +S  + +           ++ + S+D+++ VW  +    +    +      G+    
Sbjct: 198 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 257

Query: 140 YGCKFGPRGDYIIAHGFQGSLHL-------------DVTTWKQIQTLPCHQLTITQLAFS 186
           Y   F   G  +++     S+ L                +     T   H+  +  +A +
Sbjct: 258 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317

Query: 187 PDDTHLVSVSRDRRWGLYKRQSSGRL-SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS 245
            +D +++S S+DR    + ++S   L  L    +    V   +  G +   +   F T S
Sbjct: 318 QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA--VANGSSLGPEYNVFATGS 375

Query: 246 RDGVCVVW 253
            D    +W
Sbjct: 376 GDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.7 bits (109), Expect = 2e-06
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY 82
           W+ + G  L  L  H++ V++V     +SL PE+    + S D  A +WKY
Sbjct: 335 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.6 bits (106), Expect = 4e-06
 Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 27/178 (15%)

Query: 55  WVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH------------- 101
                    + K + + SLD+   +W   +          ++S   H             
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 266

Query: 102 --LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY-----GCKFGPRGDYIIAH 154
             ++S S+D+S+ +W                     T   +             +YI++ 
Sbjct: 267 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG 326

Query: 155 GFQGSLHL-DVTTWKQIQTLPCHQLTITQLA------FSPDDTHLVSVSRDRRWGLYK 205
                +   D  +   +  L  H+ ++  +A        P+     + S D +  ++K
Sbjct: 327 SKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 3e-09
 Identities = 25/252 (9%), Positives = 58/252 (23%), Gaps = 23/252 (9%)

Query: 17  LYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT 76
                N  + + + K   +G  ++         +  +                +C     
Sbjct: 90  QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149

Query: 77  AILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR-------- 128
           +   K              D     L+      +      D +                 
Sbjct: 150 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRS 209

Query: 129 -------VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTIT 181
                    +    T   +   + P G+++       ++ +          L  H+  + 
Sbjct: 210 WDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL 269

Query: 182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF 241
            L F+      VS  +D     ++      +                +     S D +Y 
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--------ESSSVLSCDISVDDKYI 321

Query: 242 LTISRDGVCVVW 253
           +T S D    V+
Sbjct: 322 VTGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 5e-07
 Identities = 31/290 (10%), Positives = 72/290 (24%), Gaps = 31/290 (10%)

Query: 14  GKVLYTLTNHKSKVMAVKWNGEGGKV-LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS 72
            + +YT      KV  +   G    V      N  + + + K        P+   L+   
Sbjct: 63  TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL------LPDGCTLIVGG 116

Query: 73  LDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV 132
              T  +W   +    +   +   +   + L+ S D  +             +      V
Sbjct: 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176

Query: 133 GGNTLGFYGCK---FGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDD 189
                   G         G  +   G   ++        +          I  L + P  
Sbjct: 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG 236

Query: 190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV 249
             L          +          +         +H+  +  + +++  ++F++  +D +
Sbjct: 237 EWLAVGMESSNVEVLH--------VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288

Query: 250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
              W              T +            + S   S D   + +  
Sbjct: 289 LNAW-------------RTPYGASIFQSKESSSVLSCDISVDDKYIVTGS 325

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR 197
               KF   G + ++ G    L+         I        ++     S DD ++V+ S 
Sbjct: 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSG 326

Query: 198 DRRWGLYK 205
           D++  +Y+
Sbjct: 327 DKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 6e-04
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 8/88 (9%)

Query: 225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY 284
           H  ++  V  S+ +R+  T    G   VW +  P  +  + Q                I 
Sbjct: 50  HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLD-------CLNRDNYIR 101

Query: 285 SLAASHDGTLLASACKATKPEHAAIIIW 312
           S     DG  L    +A+      +   
Sbjct: 102 SCKLLPDGCTLIVGGEASTLSIWDLAAP 129

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 52.2 bits (123), Expect = 3e-08
 Identities = 26/222 (11%), Positives = 53/222 (23%), Gaps = 19/222 (8%)

Query: 51  MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKS 110
           +A  + L       +        D         +  N   Y    D+   +L   S    
Sbjct: 142 IAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL 201

Query: 111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS--------LHL 162
                       +   ++   +          K  PR     A  +  +        +++
Sbjct: 202 DPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV 261

Query: 163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN 222
           D   ++ I  L    L  +         +                  G L       +  
Sbjct: 262 DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK-----------GVLLKYDVKTRKV 310

Query: 223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
              K  +  +  S D +  +    DG    + L +P  E  +
Sbjct: 311 TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 44.5 bits (103), Expect = 9e-06
 Identities = 25/297 (8%), Positives = 55/297 (18%), Gaps = 30/297 (10%)

Query: 14  GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL 73
            KV +     +   + + ++   GK       +   V A+    N        D      
Sbjct: 54  TKVAFIHGTREGDFLGI-YDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMT 111

Query: 74  DKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW----LETARV 129
                    V E +                                        +E  ++
Sbjct: 112 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 171

Query: 130 GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-------QIQTLPCHQLTIT 181
                     Y   F      +    ++      D            +   +P    +  
Sbjct: 172 FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 231

Query: 182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF 241
                P      +   D      +                      I         + Y+
Sbjct: 232 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYY 291

Query: 242 LTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298
                 GV + + +                + +K+      +  L  S D   +   
Sbjct: 292 QGAPEKGVLLKYDV----------------KTRKVTEVKNNLTDLRLSADRKTVMVR 332

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.7 bits (120), Expect = 9e-08
 Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 3/141 (2%)

Query: 162 LDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT 221
           +D  + K ++ +      +     S    +L+ + RD R  +     +   + VA     
Sbjct: 47  VDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMID-LWAKEPTKVAEIKIG 104

Query: 222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY 281
               + +       ++ RY +  +          GE    + +V         + Y    
Sbjct: 105 IE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 163

Query: 282 EIYSLAASHDGTLLASACKAT 302
            + ++ ASH+        K T
Sbjct: 164 RVAAIIASHEHPEFIVNVKET 184

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 49.4 bits (117), Expect = 2e-07
 Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 19/210 (9%)

Query: 60  SLDPEHKDLVSCSLDKTAILW-----KYVS--EGNYLPYHMRDDSKQLHLLSCSMDKSII 112
             D E+   V+        L      +  +  +  Y  +  R  +   +L     D  + 
Sbjct: 27  DWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVN 86

Query: 113 VWAPDPTTGLWLETARVGEVGGNTLGF-YGCKFGPRGDYIIAHGFQGSLH--LDVTTWKQ 169
           +   D         A + ++G            G    Y IA  +    +  +D  T + 
Sbjct: 87  MI--DLWMKEPTTVAEI-KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 143

Query: 170 IQTLPCHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI 228
            +      +T  +  + P+     +  S  R   +   + +G++ LV  +D  N     I
Sbjct: 144 KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI 203

Query: 229 -----IWGVAWSHDSRYFLTISRDGVCVVW 253
                +         RYF+T +     +V 
Sbjct: 204 SAERFLHDGGLDGSHRYFITAANARNKLVV 233

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 48.3 bits (114), Expect = 6e-07
 Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 5/142 (3%)

Query: 162 LDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT 221
           +D +T++    L      +     S    +L  + RD +  +         + VA   K 
Sbjct: 47  IDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDL-WMKEPTTVA-EIKI 103

Query: 222 NGVHKRIIWGVAWSHDSRY-FLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG 280
               + I        + +Y           V+        ++      +  + Q+ Y   
Sbjct: 104 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE-YHPE 162

Query: 281 YEIYSLAASHDGTLLASACKAT 302
             + ++ ASH         K T
Sbjct: 163 PRVAAILASHYRPEFIVNVKET 184

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.5 bits (116), Expect = 2e-07
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR 239
           I+  A++ D T +     +    +Y++  +  + +    +     H   + GV W+ DS 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-----HNGQVTGVDWAPDSN 64

Query: 240 YFLTISRDGVCVVW 253
             +T   D    VW
Sbjct: 65  RIVTCGTDRNAYVW 78

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (104), Expect = 7e-06
 Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 10/70 (14%)

Query: 229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA 288
           I   AW+ D         +    ++                W +V +L  H  ++  +  
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYE----------KSGNKWVQVHELKEHNGQVTGVDW 59

Query: 289 SHDGTLLASA 298
           + D   + + 
Sbjct: 60  APDSNRIVTC 69

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.2 bits (97), Expect = 5e-05
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 140 YGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196
               +      I        +H+       W Q+  L  H   +T + ++PD   +V+  
Sbjct: 11  SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 70

Query: 197 RDRRWGLYKRQ 207
            DR   ++  +
Sbjct: 71  TDRNAYVWTLK 81

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (110), Expect = 1e-06
 Identities = 46/310 (14%), Positives = 86/310 (27%), Gaps = 23/310 (7%)

Query: 10  NGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV 69
           +   GK L TL  H   V + +          T    K         ++T          
Sbjct: 43  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 102

Query: 70  SCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH------LLSCSMDKSIIVWAPDPTTGLW 123
               +K  +     +               L              + ++  A D    +W
Sbjct: 103 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 162

Query: 124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182
                                   G ++++     S+ + DV T   I TL  HQ   + 
Sbjct: 163 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 222

Query: 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL 242
           +    +   LVS + D    ++       +    C     G +K          +  + +
Sbjct: 223 MELKDN--ILVSGNADSTVKIWD------IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 274

Query: 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302
           T S DG   +W L       +LV         +  G G  ++ + AS+   + A      
Sbjct: 275 TSSDDGTVKLWDLKTGEFIRNLV-------TLESGGSGGVVWRIRASNTKLVCAVGS-RN 326

Query: 303 KPEHAAIIIW 312
             E   +++ 
Sbjct: 327 GTEETKLLVL 336

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 15/244 (6%), Positives = 38/244 (15%), Gaps = 24/244 (9%)

Query: 32  WNGEGGKVLYTLTNHKSKVMAVK-WVLNTSLDPEHKDL-VSCSLDKTAILW-----KYVS 84
           ++      +  +    +   +V   V           L         A            
Sbjct: 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160

Query: 85  EGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144
                                S   S+                       N         
Sbjct: 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQAN 220

Query: 145 GPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD------ 198
            P               +          +  ++       F      +V+  ++      
Sbjct: 221 YPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280

Query: 199 --RRWGLYKRQSSGRLSLVACSDKTNGVHKRI-----IWGVAWSHDSRYFLTIS--RDGV 249
                      ++   S V  +         I        +  + D       +     V
Sbjct: 281 LTVEHSRSCLAAAENTSSV--TASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338

Query: 250 CVVW 253
             ++
Sbjct: 339 LDIY 342

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.1 bits (102), Expect = 1e-05
 Identities = 9/86 (10%), Positives = 29/86 (33%), Gaps = 4/86 (4%)

Query: 168 KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR 227
           + +Q     +  I+ +   P  + L+  S D    +YK     +   +      +  +K 
Sbjct: 2   QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL----LQSLRYKH 57

Query: 228 IIWGVAWSHDSRYFLTISRDGVCVVW 253
            +    +  ++   + +      ++ 
Sbjct: 58  PLLCCNFIDNTDLQIYVGTVQGEILK 83

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 18/170 (10%), Positives = 45/170 (26%), Gaps = 13/170 (7%)

Query: 62  DPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG 121
           + + +       +      +       +        +Q      S+D  + V   D    
Sbjct: 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228

Query: 122 LWLETAR--------VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT 172
            +  + R          +           +F PR  ++   G  G +   ++ T K+I+ 
Sbjct: 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288

Query: 173 LPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSD 219
                   + +  +  D  L   + D   +      +      S +    
Sbjct: 289 FAKFN-EDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIF 337

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 23/293 (7%), Positives = 63/293 (21%), Gaps = 20/293 (6%)

Query: 7   DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK 66
                     L     +K  ++   +       +Y  T     +        +     + 
Sbjct: 39  KFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98

Query: 67  DLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLET 126
           +             +    G+        D     +   +    +I      +    ++ 
Sbjct: 99  EANLGI-------CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151

Query: 127 ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFS 186
                   ++    G        + +      +  ++ +  K             +    
Sbjct: 152 KIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC 211

Query: 187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246
                 V+V      G     S          +  +      +  + +S   ++  T   
Sbjct: 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271

Query: 247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
           DG+   W             N    +  K +    E   +  +    +L  A 
Sbjct: 272 DGIISCW-------------NLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 42/269 (15%), Positives = 87/269 (32%), Gaps = 25/269 (9%)

Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
           W+    +    LT H   V+ +++  +  +        +  +          +  ++   
Sbjct: 40  WDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA 97

Query: 92  HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
            +        +++CS D+SI VW     T + L    VG                   YI
Sbjct: 98  VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------AVNVVDFDDKYI 151

Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
           ++     ++ + + +T + ++TL  H+  I        D  +VS S D    L+  +   
Sbjct: 152 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLWDIECGA 209

Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW 270
            L           +            D++  ++ + DG   VW L       D       
Sbjct: 210 CL---------RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL---VAALDPRAPAGT 257

Query: 271 PEVQKLYGHGYEIYSLAASHDGTLLASAC 299
             ++ L  H   ++ L    D   + S+ 
Sbjct: 258 LCLRTLVEHSGRVFRLQ--FDEFQIVSSS 284

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.5 bits (98), Expect = 3e-05
 Identities = 32/225 (14%), Positives = 62/225 (27%), Gaps = 12/225 (5%)

Query: 11  GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVS 70
            E    + +         +V  +  G       T   +  + +  +         +   S
Sbjct: 171 LELQGTVESPMTPSQFATSVDISERG----LIATGFNNGTVQISELSTLRPLYNFESQHS 226

Query: 71  CSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG 130
              +  +I     S    L     D +    +     +    + +    T          
Sbjct: 227 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS---QASL 283

Query: 131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH----QLTITQLAF 185
               ++       F   G+ + + G+ G L   DV T ++I TL  H    ++    LA 
Sbjct: 284 GEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAV 343

Query: 186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW 230
                 L          L K   SG  + +  S     + + I W
Sbjct: 344 DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 388

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.5 bits (98), Expect = 4e-05
 Identities = 26/243 (10%), Positives = 58/243 (23%), Gaps = 50/243 (20%)

Query: 59  TSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH---------------------MRDDS 97
            S+   +   VSCS D    +W      N  P                        RD  
Sbjct: 18  FSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 77

Query: 98  KQLHLLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH 154
           +   + + S    ++ +     D T  +  E   + +       F+  K+G   D +++H
Sbjct: 78  ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 137

Query: 155 ------------------------GFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDT 190
                                       +    +     +++        T +  S    
Sbjct: 138 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL 197

Query: 191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC 250
            + +   +    + +  +         S  +   +   I  V +S               
Sbjct: 198 -IATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255

Query: 251 VVW 253
              
Sbjct: 256 GCI 258

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 32/285 (11%), Positives = 61/285 (21%), Gaps = 36/285 (12%)

Query: 32  WNGEGGKVLYTLTNHKSKVMAV-KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP 90
           ++         +    +    V  +   TSL P+ K L+         +     EG    
Sbjct: 83  FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 142

Query: 91  YHMRDDSKQL-------HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK 143
             +                     D S+   A        +    V       L  +   
Sbjct: 143 RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 202

Query: 144 FGPRGDYII--AHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW 201
               G  +     G    + L     K +  +           + P     V+  R    
Sbjct: 203 SQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR 262

Query: 202 GLYKRQSSGRLSLVACSD-------KTNGVHKRI-----IWGVAWSHDSRYFL--TISRD 247
                           S        KT     +      I  +  S D +  L    + D
Sbjct: 263 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGD 322

Query: 248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG 292
               +          D         ++ +   G+    +  +  G
Sbjct: 323 KTLYIH---------DAESGEE---LRSVNQLGHGPQVITTADMG 355

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.9 bits (91), Expect = 3e-04
 Identities = 34/275 (12%), Positives = 61/275 (22%), Gaps = 24/275 (8%)

Query: 32  WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
                       T H  +    K        P      S  +     +W      + L  
Sbjct: 43  VPVGSLTDTEIYTEHSHQTTVAKT------SPSGYYCASGDVHGNVRIWDTTQTTHILKT 96

Query: 92  -------HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144
                   ++D S        +                   +          +     K 
Sbjct: 97  TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKP 156

Query: 145 GPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLY 204
                 I           +   +K   T   H   +  + ++PD +   S   D    LY
Sbjct: 157 SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 216

Query: 205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
                 +  +       N  H   ++G+ WS D     + S D    +W         ++
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW---------NV 267

Query: 265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
               +   +    G   E   L        L S  
Sbjct: 268 ATLKVEKTIP--VGTRIEDQQLGIIWTKQALVSIS 300

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 5e-04
 Identities = 25/148 (16%), Positives = 45/148 (30%), Gaps = 7/148 (4%)

Query: 144 FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWG 202
                +Y+I       + + D    K +  L  H   +  L ++     LVS S DR   
Sbjct: 19  LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI-LVSGSTDRTVR 77

Query: 203 LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262
           ++  +                        +    + +Y +T SRD    VW L +  +  
Sbjct: 78  VWDIKKGCC-----THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 132

Query: 263 DLVQNTLWPEVQKLYGHGYEIYSLAASH 290
           D  +   +P V            +   H
Sbjct: 133 DHGEEHDYPLVFHTPEENPYFVGVLRGH 160

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (82), Expect = 0.003
 Identities = 25/246 (10%), Positives = 59/246 (23%), Gaps = 17/246 (6%)

Query: 8   VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD 67
           V        +          +      E    +  L  H + V  V    N  +   + +
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181

Query: 68  LVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA 127
            +             +S      Y    D ++   +S SMD +I +W  +    ++    
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241

Query: 128 RVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSP 187
                                D  +                  +    H   ++ +    
Sbjct: 242 H----------TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291

Query: 188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD 247
              +++    + ++ +Y  +S                    IW V +         + +D
Sbjct: 292 VSDNILVSGSENQFNIYNLRSG------KLVHANILKDADQIWSVNFKGK-TLVAAVEKD 344

Query: 248 GVCVVW 253
           G   + 
Sbjct: 345 GQSFLE 350

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 39.0 bits (89), Expect = 5e-04
 Identities = 28/283 (9%), Positives = 63/283 (22%), Gaps = 36/283 (12%)

Query: 3   SEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLD 62
             PG  +     +  Y L NH   +     + +  K  +            + + + ++ 
Sbjct: 40  FGPGTAMMAPDNRTAYVLNNHYGDI--YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAIS 97

Query: 63  PEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKS-----------I 111
           P+ K++ +       +   YV +   L      D  +   +                   
Sbjct: 98  PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 157

Query: 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTW---- 167
           +  A      + ++T +                 P   Y   H         + T     
Sbjct: 158 LYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 217

Query: 168 ------------KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV 215
                           ++           F+       +  R  +          RL+  
Sbjct: 218 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKY 277

Query: 216 ACSDKTNGVHKRI-----IWGVAWSHDSRYFLTISRDGVCVVW 253
               K   + K        + VA+                 V+
Sbjct: 278 --DLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.5 bits (82), Expect = 0.003
 Identities = 37/294 (12%), Positives = 76/294 (25%), Gaps = 54/294 (18%)

Query: 37  GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY-------------- 82
            +VL T++ H   + A+              L+S S D   + W                
Sbjct: 3   DEVLKTISGHNKGITALTV----------NPLISGSYDGRIMEWSSSSMHQDHSNLIVSL 52

Query: 83  -VSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR------------- 128
             S+         DD+ +++ ++     S    A     G                    
Sbjct: 53  DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112

Query: 129 -VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSP 187
            +  V  N+ G             +  G    +                +   + ++ SP
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP 172

Query: 188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW----GVAWSHDSRYFLT 243
            +T++ +     +  LY  QS    +       +                   +     T
Sbjct: 173 SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 232

Query: 244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS 297
            S D    ++ +  P              ++ L  H   + +L      TL++S
Sbjct: 233 GSLDTNIFIYSVKRP-----------MKIIKALNAHKDGVNNLLWETPSTLVSS 275

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 21/215 (9%), Positives = 51/215 (23%), Gaps = 11/215 (5%)

Query: 23  HKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY 82
              ++  + W  +G K+     +          ++        +       D  A+  ++
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192

Query: 83  VSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC 142
            S G                   +    ++    D  TG          V    + ++  
Sbjct: 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTM--DLETGEMAMRE----VRIMDVFYFST 246

Query: 143 KFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWG 202
              P                D+     I+ +P    +   +  S D + +          
Sbjct: 247 AVNPAKTRAFGAYNVLESF-DLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLA 304

Query: 203 LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD 237
            Y  ++   L      D        +     ++ D
Sbjct: 305 AYDAET---LEKKGQVDLPGNASMSLASVRLFTRD 336

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.97
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.97
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.95
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.94
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.91
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.9
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.89
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.86
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.86
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.86
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.84
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.84
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.83
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.78
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.77
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.73
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.71
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.7
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.67
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.61
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.57
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.54
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.44
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.43
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.34
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.31
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.3
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.27
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.26
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.25
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.16
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.08
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.05
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.03
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.94
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.94
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.91
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.85
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.82
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.76
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.61
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.54
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.35
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.92
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.89
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.82
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.78
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.65
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.0
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	96.56
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	96.31
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.19
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.15
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.08
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	95.65
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.59
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	95.55
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	95.53
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.33
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	95.29
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.2
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	94.63
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.56
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	94.32
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.06
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	93.69
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	92.78
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	92.55
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	92.39
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	92.35
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	92.04
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	91.84
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	91.33
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	88.47
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	87.68
d1tl2a_	235	Tachylectin-2 {Japanese horseshoe crab (Tachypleus	87.64
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	87.44
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	85.79
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	85.18
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	83.56
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	82.91

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.2e-40  Score=264.50  Aligned_cols=271  Identities=15%  Similarity=0.160  Sum_probs=219.9

Q ss_pred             eEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc
Q psy15191          8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN   87 (312)
Q Consensus         8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~   87 (312)
                      +.....|+.+....++.  |  +.|+.++++....+.+|...|++++|+|+      |++||+|+.||+|+|||+.....
T Consensus        23 ~a~~~~g~~l~~~~~~~--v--~i~~~~~~~~~~~~~~H~~~v~~~~~sp~------g~~latg~~dg~i~iwd~~~~~~   92 (311)
T d1nr0a1          23 LGNTPAGDKIQYCNGTS--V--YTVPVGSLTDTEIYTEHSHQTTVAKTSPS------GYYCASGDVHGNVRIWDTTQTTH   92 (311)
T ss_dssp             CEECTTSSEEEEEETTE--E--EEEETTCSSCCEEECCCSSCEEEEEECTT------SSEEEEEETTSEEEEEESSSTTC
T ss_pred             EEEcCCCCEEEEEeCCE--E--EEEECCCCceeEEEcCCCCCEEEEEEeCC------CCeEeccccCceEeeeeeecccc
Confidence            34445666666555443  2  34999999999999999999999999999      99999999999999999988754


Q ss_pred             c----------ccccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCe-EEEe
Q psy15191         88 Y----------LPYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY-IIAH  154 (312)
Q Consensus        88 ~----------~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~  154 (312)
                      .          .+..+.+++++.++++++.  +..+++|++++.+..       ..+.+|...|.+++|+|++++ +++|
T Consensus        93 ~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~-------~~l~~h~~~v~~v~~~~~~~~~l~sg  165 (311)
T d1nr0a1          93 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN-------GNLTGQARAMNSVDFKPSRPFRIISG  165 (311)
T ss_dssp             CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBC-------BCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred             ccccccccccCcccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccceeeeccc
Confidence            1          3344556788888988876  456999999874422       233578889999999999886 7789


Q ss_pred             ecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191        155 GFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA  233 (312)
Q Consensus       155 ~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~  233 (312)
                      +.|+.|++ |.++.+.......|...|.++.|+|++++|++++.|+.|++||+.+......+.........|...|++++
T Consensus       166 s~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~  245 (311)
T d1nr0a1         166 SDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT  245 (311)
T ss_dssp             ETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999 88888888888899999999999999999999999999999999998888777665555555889999999


Q ss_pred             EcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCc-ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        234 WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY-EIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       234 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+|++++|++|+.||.|+|||++++.            ++..+..|.. ....+.+.+++++|++++.||.     |++|
T Consensus       246 ~s~~~~~l~tgs~Dg~v~iwd~~t~~------------~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~-----i~~w  308 (311)
T d1nr0a1         246 WSPDGTKIASASADKTIKIWNVATLK------------VEKTIPVGTRIEDQQLGIIWTKQALVSISANGF-----INFV  308 (311)
T ss_dssp             ECTTSSEEEEEETTSEEEEEETTTTE------------EEEEEECCSSGGGCEEEEEECSSCEEEEETTCC-----EEEE
T ss_pred             cCCCCCEEEEEeCCCeEEEEECCCCc------------EEEEEECCCCccceEEEEEecCCEEEEEECCCE-----EEEE
Confidence            99999999999999999999998763            5666765543 2333445556678999965555     9998

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-40  Score=264.56  Aligned_cols=258  Identities=16%  Similarity=0.239  Sum_probs=210.4

Q ss_pred             CeEEEEeccCCCceEEEEEeCCCCce-----------------------EEEEccccCcEEEEEEecCcCcCCCCceEEE
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGEGGKV-----------------------LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVS   70 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~~~~~-----------------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s   70 (312)
                      .+.+.++ +|...|.+++|++++..+                       .....+|.+.|.+++|+|+      +++|++
T Consensus        42 ~~~~~~~-~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~d------g~~l~s  114 (337)
T d1gxra_          42 ARQINTL-NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD------GCTLIV  114 (337)
T ss_dssp             EEEEEEE-CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT------SSEEEE
T ss_pred             ceEEEEC-CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCC------CCEEEE
Confidence            4556666 588888888877654211                       1223468889999999999      999999


Q ss_pred             ecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191         71 CSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY  140 (312)
Q Consensus        71 ~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~  140 (312)
                      |+.||.|++||+.....          ..+....+++++.++++++.|+.|++|++.+.+.  ...     ...|...+.
T Consensus       115 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~--~~~-----~~~~~~~v~  187 (337)
T d1gxra_         115 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQ-----FQGHTDGAS  187 (337)
T ss_dssp             EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEE-----ECCCSSCEE
T ss_pred             eeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc-----ccccccccc
Confidence            99999999999875543          1233445577888999999999999999987432  222     236788899


Q ss_pred             EEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC
Q psy15191        141 GCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       141 ~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                      +++|++++..+++++.|+.+++ |+++.+....+. |...|.+++|+|++++|++++.|+.+++||++.........   
T Consensus       188 ~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---  263 (337)
T d1gxra_         188 CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---  263 (337)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC---
T ss_pred             cccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccccccccccccccccc---
Confidence            9999999999999999999999 888777766664 88999999999999999999999999999999877654322   


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                           |...|++++|+|++++|++++.||.|++||+.++.            .+.. ..|...|.+++|+|++++|++|+
T Consensus       264 -----~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~------------~~~~-~~~~~~v~~~~~s~d~~~l~t~s  325 (337)
T d1gxra_         264 -----HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA------------SIFQ-SKESSSVLSCDISVDDKYIVTGS  325 (337)
T ss_dssp             -----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------------EEEE-EECSSCEEEEEECTTSCEEEEEE
T ss_pred             -----cccccceEEECCCCCEEEEEeCCCeEEEEECCCCC------------EEEE-ccCCCCEEEEEEeCCCCEEEEEe
Confidence                 78889999999999999999999999999998763            3433 45788999999999999999996


Q ss_pred             cCCCcccceEEeC
Q psy15191        300 KATKPEHAAIIIW  312 (312)
Q Consensus       300 ~d~~~~dg~i~iW  312 (312)
                      .|+.     |+||
T Consensus       326 ~D~~-----I~vW  333 (337)
T d1gxra_         326 GDKK-----ATVY  333 (337)
T ss_dssp             TTSC-----EEEE
T ss_pred             CCCe-----EEEE
Confidence            6555     9999

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.1e-39  Score=255.84  Aligned_cols=260  Identities=22%  Similarity=0.313  Sum_probs=223.4

Q ss_pred             EEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191         16 VLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT   76 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~   76 (312)
                      ..++|+||++.|++++                   |+..+++++.++++|...|.+++|+|+      +.+++++..++.
T Consensus         9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~------~~~~~~~~~~~~   82 (317)
T d1vyhc1           9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS------GKLLASCSADMT   82 (317)
T ss_dssp             CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT------SSEEEEEETTSC
T ss_pred             ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecc------cccccccccccc
Confidence            3467889999999998                   555557788889999999999999999      899999999999


Q ss_pred             EEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC
Q psy15191         77 AILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG  148 (312)
Q Consensus        77 i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  148 (312)
                      +.+|+.......        ......+.+++..+++++.|+.+++||+++.+.  ....     ..|...+.+++|+|++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~  155 (317)
T d1vyhc1          83 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTF-----TGHREWVRMVRPNQDG  155 (317)
T ss_dssp             CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE--EEEE-----ECCSSCEEEEEECTTS
T ss_pred             cccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeeccccee--eeEE-----ccCCCcceeeecccCC
Confidence            999998776542        233344567788999999999999999988542  2222     3677889999999999


Q ss_pred             CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCC--------------------CEEEEEecCCeEEEEEcc
Q psy15191        149 DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDD--------------------THLVSVSRDRRWGLYKRQ  207 (312)
Q Consensus       149 ~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~--------------------~~l~~~~~d~~i~~wd~~  207 (312)
                      +++++++.|+.+++ +..+.+....+..|...+..+.|+|++                    .++++++.|+.|++||++
T Consensus       156 ~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~  235 (317)
T d1vyhc1         156 TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS  235 (317)
T ss_dssp             SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred             CEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECC
Confidence            99999999999999 888888888888899999999998853                    478999999999999999


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEE
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA  287 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  287 (312)
                      +.+.+..+..       |...|.+++|+|++++|++|+.||.|++||+.++.            ++..+.+|...|++++
T Consensus       236 ~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~h~~~V~~~~  296 (317)
T d1vyhc1         236 TGMCLMTLVG-------HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR------------CMKTLNAHEHFVTSLD  296 (317)
T ss_dssp             TTEEEEEEEC-------CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC------------CCEEEECCSSCEEEEE
T ss_pred             CCcEEEEEeC-------CCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCc------------EEEEEcCCCCCEEEEE
Confidence            9888877775       78889999999999999999999999999998763            6788899999999999


Q ss_pred             eccCCCeEEEEecCCCcccceEEeC
Q psy15191        288 ASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       288 ~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+|++++|++|+.     ||+|+||
T Consensus       297 ~s~~~~~l~s~s~-----Dg~i~iW  316 (317)
T d1vyhc1         297 FHKTAPYVVTGSV-----DQTVKVW  316 (317)
T ss_dssp             ECSSSSCEEEEET-----TSEEEEE
T ss_pred             EcCCCCEEEEEeC-----CCeEEEe
Confidence            9999999999955     4559999

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-37  Score=251.41  Aligned_cols=266  Identities=19%  Similarity=0.254  Sum_probs=219.2

Q ss_pred             CCCeEEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191         12 EGGKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS   72 (312)
Q Consensus        12 ~~~~~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~   72 (312)
                      ...+...+|+||++.|++++                   |+..+++.+..+..|...|.+++|+|+      +.++++|+
T Consensus        43 ~~~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~~~~  116 (340)
T d1tbga_          43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS------GNYVACGG  116 (340)
T ss_dssp             CCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTT------SSEEEEEE
T ss_pred             cceeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeecc------ceeeeeec
Confidence            34567889999999999999                   454557788899999999999999999      99999999


Q ss_pred             CCCcEEEeeecCCccccc-----------ccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         73 LDKTAILWKYVSEGNYLP-----------YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        73 ~dg~i~vw~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      .|+.+++|+.........           ...........+.....+.....+........  ...     ..+...+..
T Consensus       117 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~  189 (340)
T d1tbga_         117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT--TTF-----TGHTGDVMS  189 (340)
T ss_dssp             TTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEE--EEE-----ECCSSCEEE
T ss_pred             ccceeecccccccccccccceeccccccccccccccccccccccccccccccccccccccc--ccc-----cccceeEee
Confidence            999999999876543111           11111223335677778888888877653221  111     245667888


Q ss_pred             EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191        142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK  220 (312)
Q Consensus       142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  220 (312)
                      ..+.+.+.++++++.|+.+++ |.++.+....+.+|...|++++|+|++++|++++.|+.|++||++.......+.... 
T Consensus       190 ~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~-  268 (340)
T d1tbga_         190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-  268 (340)
T ss_dssp             EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-
T ss_pred             eccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccccccc-
Confidence            999999999999999999999 888888888899999999999999999999999999999999999877766554322 


Q ss_pred             CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                          +...|.+++|+|++++|++|+.||.|++||+.++.            ++..+.+|.++|++++|+|++++|++||.
T Consensus       269 ----~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~------------~~~~~~~H~~~V~~l~~s~d~~~l~s~s~  332 (340)
T d1tbga_         269 ----IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD------------RAGVLAGHDNRVSCLGVTDDGMAVATGSW  332 (340)
T ss_dssp             ----CCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCC------------EEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred             ----ccCceEEEEECCCCCEEEEEECCCEEEEEECCCCc------------EEEEEcCCCCCEEEEEEeCCCCEEEEEcc
Confidence                66779999999999999999999999999998763            78889999999999999999999999965


Q ss_pred             CCCcccceEEeC
Q psy15191        301 ATKPEHAAIIIW  312 (312)
Q Consensus       301 d~~~~dg~i~iW  312 (312)
                      |+.     |+||
T Consensus       333 Dg~-----v~iW  339 (340)
T d1tbga_         333 DSF-----LKIW  339 (340)
T ss_dssp             TSC-----EEEE
T ss_pred             CCE-----EEEe
Confidence            555     9999

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-38  Score=256.90  Aligned_cols=237  Identities=15%  Similarity=0.181  Sum_probs=203.6

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------ccccccCCCCCceEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~~~~~~l~  103 (312)
                      .+.+.++ +|...|++++|+|+      +++|++|+ ||.|+|||+......             .+..+.+++++.+|+
T Consensus        42 ~~~~~~~-~H~~~V~~v~fs~~------g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~  113 (337)
T d1gxra_          42 ARQINTL-NHGEVVCAVTISNP------TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLI  113 (337)
T ss_dssp             EEEEEEE-CCSSCCCEEEECSS------SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEE
T ss_pred             ceEEEEC-CCCCcEEEEEECCC------CCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEE
Confidence            4556666 69999999999999      99999998 899999999765431             245566788999999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      +++.|+.|++||+...........     ..|...+..++|+|++.++++++.++.+++ +..+.+.......|...+.+
T Consensus       114 s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~  188 (337)
T d1gxra_         114 VGGEASTLSIWDLAAPTPRIKAEL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC  188 (337)
T ss_dssp             EEESSSEEEEEECCCC--EEEEEE-----ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             Eeeccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999987555444333     367788999999999999999999999999 88888888888889999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE  262 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  262 (312)
                      ++|++++..+++++.|+.+++||+++.+.+....        +...|.+++|+|++++|++++.|+.|++||+..+    
T Consensus       189 l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~--------~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~----  256 (337)
T d1gxra_         189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD--------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP----  256 (337)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS----
T ss_pred             ccccccccccccccccccccccccccceeecccc--------cccceEEEEEcccccccceecccccccccccccc----
Confidence            9999999999999999999999999888776665        7778999999999999999999999999999876    


Q ss_pred             ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                               .......|...|++++|+|++++|++++.|     |.|++|
T Consensus       257 ---------~~~~~~~~~~~i~~v~~s~~g~~l~s~s~D-----g~i~iw  292 (337)
T d1gxra_         257 ---------DKYQLHLHESCVLSLKFAYCGKWFVSTGKD-----NLLNAW  292 (337)
T ss_dssp             ---------CEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred             ---------ccccccccccccceEEECCCCCEEEEEeCC-----CeEEEE
Confidence                     345567899999999999999999999554     559998

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.8e-37  Score=251.65  Aligned_cols=260  Identities=22%  Similarity=0.285  Sum_probs=196.2

Q ss_pred             cCCCceEEEEEeCCC------------------CceEEEEc------------------cccCcEEEEEEecCcCcCCCC
Q psy15191         22 NHKSKVMAVKWNGEG------------------GKVLYTLT------------------NHKSKVMAVKWVLNTSLDPEH   65 (312)
Q Consensus        22 ~h~~~v~~~~w~~~~------------------~~~~~~~~------------------~h~~~v~~~~~~~~~~~~~~~   65 (312)
                      +|++.|++++|++++                  ++.+..+.                  +|...|++++|+|+      +
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~------~  133 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD------G  133 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT------S
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCC------C
Confidence            599999999977754                  33333332                  35667999999999      9


Q ss_pred             ceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      ++|++|+.||.|++||...++..        .+......+++..+++++.++.+++||..+....  ....     .+. 
T Consensus       134 ~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~-----~~~-  205 (388)
T d1erja_         134 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS--LTLS-----IED-  205 (388)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-----CSS-
T ss_pred             Ccceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccc--cccc-----ccc-
Confidence            99999999999999999887652        2334445677789999999999999999874322  2221     233 


Q ss_pred             ceeEEEEC-CCCCeEEEeecCCeEEE-ecccCceeeeec-------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        138 GFYGCKFG-PRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       138 ~v~~~~~~-~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      ...++.++ +++++|++++.|+.+++ +.++......+.       +|...|.+++|+|++++|++++.|+.|++||+++
T Consensus       206 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~  285 (388)
T d1erja_         206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN  285 (388)
T ss_dssp             CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             ccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccC
Confidence            34455555 48899999999999999 777766555433       6888999999999999999999999999999987


Q ss_pred             CCeEEEEeccCCC-----CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcce
Q psy15191        209 SGRLSLVACSDKT-----NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEI  283 (312)
Q Consensus       209 ~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  283 (312)
                      .............     ...|...|.+++|+|++++|++|+.||.|++||+.++.            ++..+.+|.+.|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~------------~~~~l~~H~~~V  353 (388)
T d1erja_         286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN------------PLLMLQGHRNSV  353 (388)
T ss_dssp             -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC------------EEEEEECCSSCE
T ss_pred             CccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc------------EEEEEeCCCCCE
Confidence            5543322211111     11177889999999999999999999999999998773            788899999999


Q ss_pred             eEEEe------ccCCCeEEEEecCCCcccceEEeC
Q psy15191        284 YSLAA------SHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       284 ~~~~~------s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .++++      +|++++|||||.     ||.|+||
T Consensus       354 ~~~~~~~~~~~spd~~~l~s~s~-----Dg~I~iW  383 (388)
T d1erja_         354 ISVAVANGSSLGPEYNVFATGSG-----DCKARIW  383 (388)
T ss_dssp             EEEEECSSCTTCTTCEEEEEEET-----TSEEEEE
T ss_pred             EEEEEecCcccCCCCCEEEEEeC-----CCEEEEE
Confidence            99874      679999999955     5559999

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9e-37  Score=250.92  Aligned_cols=263  Identities=16%  Similarity=0.219  Sum_probs=198.3

Q ss_pred             EEeCCCCceE----EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------------------
Q psy15191         31 KWNGEGGKVL----YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------------------   88 (312)
Q Consensus        31 ~w~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------------------   88 (312)
                      .|++...+..    ....+|.+.|++++|+|+      |++||+|+ |++|+|||+.+++..                  
T Consensus        42 ~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~d------g~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (388)
T d1erja_          42 LYNPALPREIDVELHKSLDHTSVVCCVKFSND------GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNT  114 (388)
T ss_dssp             EECTTSCCCEEEEEEEEEECSSCCCEEEECTT------SSEEEEEC-BSCEEEEETTTCCEEEEECC-------------
T ss_pred             EeCCCCCcceeeeeEeeCCCCCcEEEEEECCC------CCEEEEEe-CCeEEEEEecccceEeeeccccccccccccccc
Confidence            3887654432    233369999999999999      99999987 899999999876541                  


Q ss_pred             --------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeE
Q psy15191         89 --------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL  160 (312)
Q Consensus        89 --------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i  160 (312)
                              .+..+.+++++.+|++|+.||.|++||....+.  ...     ..+|...|.++.+++++..+++++.++.+
T Consensus       115 ~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~--~~~-----~~~h~~~v~~~~~~~~~~~~~~~~~~~~i  187 (388)
T d1erja_         115 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI--VMI-----LQGHEQDIYSLDYFPSGDKLVSGSGDRTV  187 (388)
T ss_dssp             ----CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEE-----ECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             ccccCCCCCEEEEEECCCCCcceeccccccccccccccccc--ccc-----cccccccccccccccccccccccccceee
Confidence                    234456678889999999999999999987432  222     23788899999999999999999999999


Q ss_pred             EE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191        161 HL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR  239 (312)
Q Consensus       161 ~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  239 (312)
                      ++ |.++.........+...+..+.+.+++++|++++.|+.|++||.++......+.........|...|++++|+|+++
T Consensus       188 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~  267 (388)
T d1erja_         188 RIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ  267 (388)
T ss_dssp             EEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS
T ss_pred             eeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCC
Confidence            99 77777666666655544444444458899999999999999999998887776655444445888999999999999


Q ss_pred             eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        240 YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       240 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|++++.||.|++||+.......................|...|.+++|+|++++|++|+.     ||.|++|
T Consensus       268 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~-----dg~i~vw  335 (388)
T d1erja_         268 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK-----DRGVLFW  335 (388)
T ss_dssp             EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET-----TSEEEEE
T ss_pred             EEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeC-----CCEEEEE
Confidence            9999999999999999876544332222233356667789999999999999999999955     4559998

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.6e-36  Score=239.65  Aligned_cols=249  Identities=18%  Similarity=0.199  Sum_probs=182.7

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeC
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~  107 (312)
                      |+..+.+.||.++|++++|+|+      +++|+||+.||+|++||+++++..         .+..+.+.+++ .+++++.
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~d------g~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~~~~~~   74 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSAD------GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSW   74 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEET
T ss_pred             CccceEcCCCCCCcEEEEECCC------CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccc-eeecccc
Confidence            5678889999999999999998      889999999999999998876652         22334445665 4667778


Q ss_pred             CCcEEEEcCCCCcceeee-----------eee-----------------e-----cccCCCccceeEEEECCCCCeEEEe
Q psy15191        108 DKSIIVWAPDPTTGLWLE-----------TAR-----------------V-----GEVGGNTLGFYGCKFGPRGDYIIAH  154 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~-----------~~~-----------------~-----~~~~~~~~~v~~~~~~~~~~~l~~~  154 (312)
                      |+.+++|+..........           ...                 .     .........+.+++|+|++++++++
T Consensus        75 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  154 (299)
T d1nr0a2          75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG  154 (299)
T ss_dssp             TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred             eeeEEEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            899999986542210000           000                 0     0000123356789999999999999


Q ss_pred             ecCCeEEE-ecccCceee-eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191        155 GFQGSLHL-DVTTWKQIQ-TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       155 ~~~~~i~~-d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                      +.++.+++ |+++..... ....|...|++++|+|++++|++++.|+.|++||+.+.........    ...|..+|+++
T Consensus       155 ~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~----~~~h~~~v~~l  230 (299)
T d1nr0a2         155 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS----WTFHTAKVACV  230 (299)
T ss_dssp             ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC----CCCCSSCEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccc
Confidence            99999999 666555433 2336889999999999999999999999999999987665433222    11278899999


Q ss_pred             EEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCCcccceEEe
Q psy15191        233 AWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATKPEHAAIII  311 (312)
Q Consensus       233 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~i  311 (312)
                      +|+|++++|++|+.||.|++||+..+...          .......| ...|..+.| +++++|+++|.|+.     |++
T Consensus       231 ~~s~~~~~l~sgs~dg~i~iwd~~~~~~~----------~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~-----i~i  294 (299)
T d1nr0a2         231 SWSPDNVRLATGSLDNSVIVWNMNKPSDH----------PIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSN-----IKF  294 (299)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTCTTSC----------CEEETTSSTTSCEEEEEE-EETTEEEEEETTSC-----EEE
T ss_pred             cccccccceEEEcCCCEEEEEECCCCCcc----------eEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCE-----EEE
Confidence            99999999999999999999999876432          22223333 455666655 66789999965555     999


Q ss_pred             C
Q psy15191        312 W  312 (312)
Q Consensus       312 W  312 (312)
                      |
T Consensus       295 W  295 (299)
T d1nr0a2         295 W  295 (299)
T ss_dssp             E
T ss_pred             E
Confidence            9

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.2e-36  Score=246.38  Aligned_cols=230  Identities=10%  Similarity=0.089  Sum_probs=183.1

Q ss_pred             cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191         47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAP  116 (312)
Q Consensus        47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~  116 (312)
                      .++|+|++|+|+      +++||+|+.||.|+|||..+++.          ..+..+.++|++.+|++++.|++|++||+
T Consensus         7 ~~pIt~~~~s~d------g~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~   80 (371)
T d1k8kc_           7 VEPISCHAWNKD------RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL   80 (371)
T ss_dssp             SSCCCEEEECTT------SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             CCCeEEEEECCC------CCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEee
Confidence            578999999999      99999999999999999987653          13455556788889999999999999999


Q ss_pred             CCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc----eeeeecccCCceeEEEECCCCCE
Q psy15191        117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK----QIQTLPCHQLTITQLAFSPDDTH  191 (312)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~  191 (312)
                      .+.......     .+.+|...|.+++|+|+++.+++++.++.+++ +.....    .......|...|.+++|+|++++
T Consensus        81 ~~~~~~~~~-----~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~  155 (371)
T d1k8kc_          81 KGRTWKPTL-----VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL  155 (371)
T ss_dssp             ETTEEEEEE-----ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred             ccccccccc-----ccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccc
Confidence            874433222     23367888999999999999999999999998 333322    22334478899999999999999


Q ss_pred             EEEEecCCeEEEEEccCCCeEEEEeccC-----------CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191        192 LVSVSRDRRWGLYKRQSSGRLSLVACSD-----------KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT  260 (312)
Q Consensus       192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  260 (312)
                      |++++.|+.|++||..............           .....|...|.+++|+|++++|++++.|+.|++||+..+. 
T Consensus       156 l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~-  234 (371)
T d1k8kc_         156 LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-  234 (371)
T ss_dssp             EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT-
T ss_pred             eeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeeccc-
Confidence            9999999999999987533111100000           0011177789999999999999999999999999998763 


Q ss_pred             CcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191        261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                                 .+..+..|..+|.+++|+|++++|++|+
T Consensus       235 -----------~~~~~~~~~~~v~s~~fs~d~~~la~g~  262 (371)
T d1k8kc_         235 -----------AVATLASETLPLLAVTFITESSLVAAGH  262 (371)
T ss_dssp             -----------EEEEEECSSCCEEEEEEEETTEEEEEET
T ss_pred             -----------ceeeeecccccceeeeecCCCCEEEEEc
Confidence                       6788889999999999999999888764

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.1e-35  Score=238.36  Aligned_cols=277  Identities=12%  Similarity=0.148  Sum_probs=204.3

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-   87 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-   87 (312)
                      .++|+.+++-. ..+.|  ..|+.++++  .+..+++|.++|++++|+|+      +++|++|+.|++|+|||+.++.. 
T Consensus        16 s~dg~~la~~~-~~~~i--~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~------~~~l~s~s~D~~i~vWd~~~~~~~   86 (371)
T d1k8kc_          16 NKDRTQIAICP-NNHEV--HIYEKSGNKWVQVHELKEHNGQVTGVDWAPD------SNRIVTCGTDRNAYVWTLKGRTWK   86 (371)
T ss_dssp             CTTSSEEEEEC-SSSEE--EEEEEETTEEEEEEEEECCSSCEEEEEEETT------TTEEEEEETTSCEEEEEEETTEEE
T ss_pred             CCCCCEEEEEe-CCCEE--EEEECCCCCEEEEEEecCCCCCEEEEEECCC------CCEEEEEECCCeEEEEeecccccc
Confidence            45677776543 33333  238877664  67888999999999999999      89999999999999999986643 


Q ss_pred             ---------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC
Q psy15191         88 ---------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG  158 (312)
Q Consensus        88 ---------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~  158 (312)
                               ..+..+.++|++..+++++.|+.+++|++..........   .....|...|.+++|+|++++|++|+.|+
T Consensus        87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~---~~~~~~~~~v~~v~~~p~~~~l~s~s~D~  163 (371)
T d1k8kc_          87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK---HIKKPIRSTVLSLDWHPNSVLLAAGSCDF  163 (371)
T ss_dssp             EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE---EECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccccccccccccccccccccccceeecccCcceeeeeeccccccccc---ccccccccccccccccccccceeccccCc
Confidence                     134555668888999999999999999987654432221   12346788899999999999999999999


Q ss_pred             eEEE-ecccCc------------------eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC
Q psy15191        159 SLHL-DVTTWK------------------QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD  219 (312)
Q Consensus       159 ~i~~-d~~~~~------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  219 (312)
                      .+++ +....+                  .......|...|.+++|+|++++|++++.|+.|++||+.+...+..+..  
T Consensus       164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~--  241 (371)
T d1k8kc_         164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS--  241 (371)
T ss_dssp             CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC--
T ss_pred             EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec--
Confidence            9999 443322                  2223347888999999999999999999999999999999888887775  


Q ss_pred             CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc-------c--c--------------------cc
Q psy15191        220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ-------N--T--------------------LW  270 (312)
Q Consensus       220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~--~--------------------~~  270 (312)
                           |..+|.+++|+|++++|++|+ |+.+++|.............       .  .                    ..
T Consensus       242 -----~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (371)
T d1k8kc_         242 -----ETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA  315 (371)
T ss_dssp             -----SSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-------
T ss_pred             -----ccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEecccc
Confidence                 778899999999999888765 66666665543211100000       0  0                    00


Q ss_pred             ceeEEeeccCcceeEEEeccCC----CeEEEEecCCCcccceEEeC
Q psy15191        271 PEVQKLYGHGYEIYSLAASHDG----TLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       271 ~~~~~~~~~~~~v~~~~~s~~~----~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ........|.+.|+++++.+.+    ..|+|+|.     ||.|+||
T Consensus       316 ~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~-----Dg~v~iW  356 (371)
T d1k8kc_         316 AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGM-----DGGMSIW  356 (371)
T ss_dssp             --CCCSSSSSSCEEEEEEEESTTTSCSEEEEEET-----TSEEEEE
T ss_pred             ccceecccccCCEEEEEEeCCCCcceEEEEEEcC-----CCeEEEE
Confidence            0011112488899999998765    35889955     4559999

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.6e-36  Score=239.99  Aligned_cols=238  Identities=16%  Similarity=0.177  Sum_probs=191.4

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPD  117 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~  117 (312)
                      +.+.+..++++|+      |+.|+.++ ++.|.+|++++....        .+..+.++|++.+|++|+.||+|++||+.
T Consensus        16 ~r~~~~~~a~~~~------g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~   88 (311)
T d1nr0a1          16 ARGTAVVLGNTPA------GDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT   88 (311)
T ss_dssp             CTTCCCCCEECTT------SSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred             CCCCeEEEEEcCC------CCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeee
Confidence            3445667888888      88998875 567999999876552        34555578899999999999999999998


Q ss_pred             CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC--CeEEE-ecccCceeeeecccCCceeEEEECCCCCE-EE
Q psy15191        118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ--GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTH-LV  193 (312)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~  193 (312)
                      +.+......+     ..|..+|.+++|+|+++++++++.+  ..+++ +.++.+....+.+|...|.+++|+|++++ |+
T Consensus        89 ~~~~~~~~~~-----~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~  163 (311)
T d1nr0a1          89 QTTHILKTTI-----PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRII  163 (311)
T ss_dssp             STTCCEEEEE-----ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEE
T ss_pred             cccccccccc-----ccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeec
Confidence            8654433333     3678899999999999999998864  45777 77777788888899999999999999885 78


Q ss_pred             EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccccee
Q psy15191        194 SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV  273 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  273 (312)
                      +|+.|+.|++||+++.+.......       |..+|++++|+|++++|++++.|+.|++||+..+.....+.     ...
T Consensus       164 sgs~d~~i~i~d~~~~~~~~~~~~-------~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-----~~~  231 (311)
T d1nr0a1         164 SGSDDNTVAIFEGPPFKFKSTFGE-------HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE-----DDS  231 (311)
T ss_dssp             EEETTSCEEEEETTTBEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB-----CTT
T ss_pred             cccccccccccccccccccccccc-------ccccccccccCcccccccccccccccccccccccccccccc-----ccc
Confidence            899999999999998777766654       78889999999999999999999999999998764221110     011


Q ss_pred             EEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        274 QKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       274 ~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ....+|...|++++|+|++++|++|+.|+     .|+||
T Consensus       232 ~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg-----~v~iw  265 (311)
T d1nr0a1         232 LKNVAHSGSVFGLTWSPDGTKIASASADK-----TIKIW  265 (311)
T ss_dssp             SSSCSSSSCEEEEEECTTSSEEEEEETTS-----EEEEE
T ss_pred             cccccccccccccccCCCCCEEEEEeCCC-----eEEEE
Confidence            22347899999999999999999995554     49998

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-34  Score=230.22  Aligned_cols=243  Identities=20%  Similarity=0.318  Sum_probs=207.2

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~  103 (312)
                      |.|. .....+|+||.++|++++|+|+      +++|+||+.||+|+|||+.+++..        .+..+.+.+++..++
T Consensus         3 w~p~-~~~~~~L~GH~~~I~~l~~sp~------~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~   75 (317)
T d1vyhc1           3 WIPR-PPEKYALSGHRSPVTRVIFHPV------FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA   75 (317)
T ss_dssp             CCCC-SSCSCEEECCSSCEEEEEECSS------SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEE
T ss_pred             cCCC-CCccEEEcCCCCCeEEEEEcCC------CCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccc
Confidence            6554 3445689999999999999999      899999999999999999887753        234455677888999


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      ++..++.+.+|+....+..       .....+...+.++.++|+++.+++++.|+.+++ |+++.+....+..|...+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (317)
T d1vyhc1          76 SCSADMTIKLWDFQGFECI-------RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM  148 (317)
T ss_dssp             EEETTSCCCEEETTSSCEE-------ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred             ccccccccccccccccccc-------cccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCccee
Confidence            9999999999998764321       223467888999999999999999999999999 88888888888899999999


Q ss_pred             EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC--------------------CceEE
Q psy15191        183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD--------------------SRYFL  242 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~  242 (312)
                      ++|+|++++|++++.|+.|++|++.+......+..       +...+..++|+|+                    +.+++
T Consensus       149 ~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (317)
T d1vyhc1         149 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-------HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL  221 (317)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE
T ss_pred             eecccCCCEEEEEeCCCeEEEEeeccceeeEEEec-------CCCCceEEEEeeccccceeeccccceeeeeccCCceeE
Confidence            99999999999999999999999999888777665       6667888888774                    45789


Q ss_pred             EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +++.|+.|++||+.++.            ++..+.+|...|.+++|+|++++|++|+.|     |.|+||
T Consensus       222 ~~~~d~~i~~~~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iw  274 (317)
T d1vyhc1         222 SGSRDKTIKMWDVSTGM------------CLMTLVGHDNWVRGVLFHSGGKFILSCADD-----KTLRVW  274 (317)
T ss_dssp             EEETTSEEEEEETTTTE------------EEEEEECCSSCEEEEEECSSSSCEEEEETT-----TEEEEE
T ss_pred             eccCCCEEEEEECCCCc------------EEEEEeCCCCCEEEEEECCCCCEEEEEECC-----CeEEEE
Confidence            99999999999998763            678889999999999999999999999554     559998

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-33  Score=225.69  Aligned_cols=264  Identities=23%  Similarity=0.329  Sum_probs=200.6

Q ss_pred             CCCCeEEEEeccCCCceE-EEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191         11 GEGGKVLYTLTNHKSKVM-AVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS   72 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~-~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~   72 (312)
                      ..+.++..+|+||++.|. ++.                 |+..++++++++.+|.+.|.+++|+|+        +|++|+
T Consensus         3 ~~~~~~~~~l~GH~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--------~l~s~s   74 (342)
T d2ovrb2           3 RGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--------IIISGS   74 (342)
T ss_dssp             HSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--------EEEEEE
T ss_pred             CCCCCcCEEECCcCCceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--------ccccce
Confidence            345566677888887764 444                 999999999999999999999999876        899999


Q ss_pred             CCCcEEEeeecCCcccccc----------------------------------------------cccCCCCCceEEEEe
Q psy15191         73 LDKTAILWKYVSEGNYLPY----------------------------------------------HMRDDSKQLHLLSCS  106 (312)
Q Consensus        73 ~dg~i~vw~~~~~~~~~~~----------------------------------------------~~~~~~~~~~l~~~~  106 (312)
                      .|+.+++|+..........                                              ..........++.++
T Consensus        75 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (342)
T d2ovrb2          75 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGA  154 (342)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEE
T ss_pred             ecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeec
Confidence            9999999997664431000                                              000011223567777


Q ss_pred             CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191        107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAF  185 (312)
Q Consensus       107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~  185 (312)
                      .|+.|++||....+  ....     +.+|...+.  .+.+++.++++++.||.|++ |+++.+....+..|...+.++++
T Consensus       155 ~d~~i~~~d~~~~~--~~~~-----~~~~~~~~~--~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~  225 (342)
T d2ovrb2         155 YDFMVKVWDPETET--CLHT-----LQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL  225 (342)
T ss_dssp             TTSCEEEEEGGGTE--EEEE-----ECCCSSCEE--EEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE
T ss_pred             CCCeEEEeecccce--eeEE-----EcCcccccc--cccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEec
Confidence            88888888776532  2222     234554444  44557889999999999999 88888888888899999998887


Q ss_pred             CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      +  +++|++++.|+.|++||+...+....+.....    |...+.++.++  ++++++|+.||.|++||++++.      
T Consensus       226 ~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~------  291 (342)
T d2ovrb2         226 K--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNK----HQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE------  291 (342)
T ss_dssp             E--TTEEEEEETTSCEEEEETTTCCEEEEECSTTS----CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC------
T ss_pred             C--CCEEEEEcCCCEEEEEecccccccccccccce----eeeceeecccC--CCeeEEEcCCCEEEEEECCCCC------
Confidence            6  46999999999999999998887776665432    56667777665  5799999999999999998874      


Q ss_pred             cccccceeEEe-----eccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKL-----YGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            .++.+     .+|...|++++|+|++.+|++|+.||+ ++..|++|
T Consensus       292 ------~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt-~~~~l~~~  336 (342)
T d2ovrb2         292 ------FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT-EETKLLVL  336 (342)
T ss_dssp             ------EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS-SCCEEEEE
T ss_pred             ------EEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCC-CeeEEEEE
Confidence                  34444     357888999999999999999987774 66678887

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-33  Score=225.80  Aligned_cols=241  Identities=18%  Similarity=0.195  Sum_probs=180.6

Q ss_pred             CceEEEEcccc-CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------------ccccccCCCCC
Q psy15191         37 GKVLYTLTNHK-SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------------LPYHMRDDSKQ   99 (312)
Q Consensus        37 ~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------------~~~~~~~~~~~   99 (312)
                      ...+..+.+|. ..|++++|+|.    .++.+|++|+.||+|+|||+..+...                .+....+++++
T Consensus        52 ~~~~~~~~gh~~~~v~~v~fsP~----~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~  127 (325)
T d1pgua1          52 VPPVVQFTGHGSSVVTTVKFSPI----KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG  127 (325)
T ss_dssp             SCSEEEECTTTTSCEEEEEECSS----TTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS
T ss_pred             ccceEEEeCCCCCCEEEEEEeeC----CCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCC
Confidence            35577888885 67999999996    55789999999999999998765431                23345567788


Q ss_pred             ceEEEEeC--CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCe-EEEeecCCeEEE-ecccCceeeeec-
Q psy15191        100 LHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY-IIAHGFQGSLHL-DVTTWKQIQTLP-  174 (312)
Q Consensus       100 ~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~~~~~~~~~~-  174 (312)
                      .++++++.  ++.+++|+.++.+  .+..     +.+|...+.+++|+|+++. +++++.|+.+++ |..+.+...... 
T Consensus       128 ~~l~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  200 (325)
T d1pgua1         128 RRLCVVGEGRDNFGVFISWDSGN--SLGE-----VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT  200 (325)
T ss_dssp             SEEEEEECCSSCSEEEEETTTCC--EEEE-----CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS
T ss_pred             CccceeeccccceEEEEeecccc--ccee-----eeecccccccccccccccceEEEeecccccccccccccccceeccc
Confidence            78877654  6789999988743  2222     3478899999999998876 677899999999 666655544433 


Q ss_pred             --ccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc---CCCceEEEeccCC
Q psy15191        175 --CHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS---HDSRYFLTISRDG  248 (312)
Q Consensus       175 --~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~s~~~dg  248 (312)
                        .|...|.+++|+|+ +.+|++++.|+.|++||+++.+.+..+..       |..++.++.|+   |++++|++++.|+
T Consensus       201 ~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~-------~~~~v~~~~~s~~~~dg~~l~s~s~D~  273 (325)
T d1pgua1         201 HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED-------DQEPVQGGIFALSWLDSQKFATVGADA  273 (325)
T ss_dssp             SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB-------TTBCCCSCEEEEEESSSSEEEEEETTS
T ss_pred             ccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccc-------cccccccceeeeeccCCCEEEEEeCCC
Confidence              67788999999996 68899999999999999999888877765       44444433333   6899999999999


Q ss_pred             eEEEEecCCCCCCcccccccccceeEEeeccCc--ceeEEEeccC-CCeEEEEecCCCcccceEEeC
Q psy15191        249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY--EIYSLAASHD-GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~-~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      .|+|||++++.            ++..+..|..  .+..+++.+. +.+|+++|.|+.     |+||
T Consensus       274 ~i~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~-----i~vw  323 (325)
T d1pgua1         274 TIRVWDVTTSK------------CVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT-----LNFY  323 (325)
T ss_dssp             EEEEEETTTTE------------EEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC-----EEEE
T ss_pred             eEEEEECCCCC------------EEEEEEecCCcccCeEEEEEECCCCEEEEEECCCE-----EEEE
Confidence            99999998763            5555555443  3444555433 347899965555     9998

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.5e-33  Score=226.72  Aligned_cols=259  Identities=18%  Similarity=0.219  Sum_probs=192.4

Q ss_pred             EEEeccCCCce-EEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEE
Q psy15191         17 LYTLTNHKSKV-MAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAI   78 (312)
Q Consensus        17 ~~~~~~h~~~v-~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~   78 (312)
                      ..+|+||...| +|+.                 |+..+++++.++.+|.++|++++|+|+       .+|++|+.|++|+
T Consensus         5 ~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-------~~l~s~s~D~~i~   77 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-------GILVSGSTDRTVR   77 (355)
T ss_dssp             EEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-------TEEEEEETTCCEE
T ss_pred             cEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-------CEEEEEecccccc
Confidence            34577776664 4554                 888899999999999999999999886       4799999999999


Q ss_pred             EeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCccee-------------------------
Q psy15191         79 LWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW-------------------------  123 (312)
Q Consensus        79 vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-------------------------  123 (312)
                      +|+.......          ........+++..+++++.|+.|++||+.+.....                         
T Consensus        78 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (355)
T d1nexb2          78 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL  157 (355)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEE
T ss_pred             cccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeee
Confidence            9998876642          11122234555678888888888888876532100                         


Q ss_pred             ----------------ee---------------eeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee
Q psy15191        124 ----------------LE---------------TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ  171 (312)
Q Consensus       124 ----------------~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~  171 (312)
                                      ..               .........+...+.++.++|+++.+++++.|+.+++ |.++.....
T Consensus       158 ~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~  237 (355)
T d1nexb2         158 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY  237 (355)
T ss_dssp             ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEE
T ss_pred             eeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccc
Confidence                            00               0001112345667888999999999999999999999 999999999


Q ss_pred             eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEE-EEEcCCCceEEEeccCCeE
Q psy15191        172 TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG-VAWSHDSRYFLTISRDGVC  250 (312)
Q Consensus       172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~dg~i  250 (312)
                      .+.+|...|.+++++  +++|++++.||.|++||+++.......         |...+.. ..+++++++|++| .||.|
T Consensus       238 ~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~g-~d~~i  305 (355)
T d1nexb2         238 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY---------HHTNLSAITTFYVSDNILVSG-SENQF  305 (355)
T ss_dssp             EECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEE---------ECTTCCCCCEEEECSSEEEEE-ETTEE
T ss_pred             ccccccccccccccc--cceeeeeecccccccccccccceeccc---------ccCCceEEEEEcCCCCEEEEE-eCCEE
Confidence            999999999999996  468999999999999999877654433         2233333 3567777776665 58999


Q ss_pred             EEEecCCCCCCccccccccccee-EEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        251 VVWGLGEPPTEEDLVQNTLWPEV-QKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       251 ~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++||++++.            ++ ..+.+|..+|.+++|+|+ .++++++.||+     ++||
T Consensus       306 ~vwd~~tg~------------~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~-----~~l~  350 (355)
T d1nexb2         306 NIYNLRSGK------------LVHANILKDADQIWSVNFKGK-TLVAAVEKDGQ-----SFLE  350 (355)
T ss_dssp             EEEETTTCC------------BCCSCTTTTCSEEEEEEEETT-EEEEEEESSSC-----EEEE
T ss_pred             EEEECCCCC------------EEEEEecCCCCCEEEEEEcCC-eEEEEEECCCc-----EEEE
Confidence            999998874            33 245679999999999987 57778855554     8877

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4e-33  Score=219.82  Aligned_cols=259  Identities=15%  Similarity=0.167  Sum_probs=188.9

Q ss_pred             CCeEEEEeccCCCceEEEEEeC-----CCCce-----EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeee
Q psy15191         13 GGKVLYTLTNHKSKVMAVKWNG-----EGGKV-----LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY   82 (312)
Q Consensus        13 ~~~~~~~~~~h~~~v~~~~w~~-----~~~~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~   82 (312)
                      ++++++++++|..+|++++|++     ..+..     .....+|...|.++.++++       ..+++++.|+++++|++
T Consensus         2 ~~~~i~~l~gH~~~I~~l~~s~l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~~~-------~~~~s~s~D~~v~~w~~   74 (287)
T d1pgua2           2 HDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKA-------QEYSSISWDDTLKVNGI   74 (287)
T ss_dssp             EEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCST-------TCCEEEETTTEEEETTE
T ss_pred             CcceeEEECCCCCceEEEEECcEEEEeCCCeEEEEECCCCCCCCCCCEEEEEecCC-------CeEEEEeeccccccccc
Confidence            3688999999999999999775     01111     1235689999999998865       56899999999999998


Q ss_pred             cCCccc-ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-eE
Q psy15191         83 VSEGNY-LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-SL  160 (312)
Q Consensus        83 ~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~i  160 (312)
                      ...+.. .+......+++..++ .+.++.+.+|+..+.+.  .....      ...  ...++++++..+++++.++ .+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~------~~~--~~~~~~~~~~~~~v~~~~~~~v  143 (287)
T d1pgua2          75 TKHEFGSQPKVASANNDGFTAV-LTNDDDLLILQSFTGDI--IKSVR------LNS--PGSAVSLSQNYVAVGLEEGNTI  143 (287)
T ss_dssp             EEEECSSCEEEEEECSSSEEEE-EETTSEEEEEETTTCCE--EEEEE------CSS--CEEEEEECSSEEEEEETTTSCE
T ss_pred             cccccccceeeeeeccCCceEE-Eeecccceeeeccceee--eeecc------ccc--eeeeeeccCcceeeecccccee
Confidence            765431 222333445554444 45566788888877442  22222      112  2346677888888888765 68


Q ss_pred             EE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-
Q psy15191        161 HL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-  237 (312)
Q Consensus       161 ~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  237 (312)
                      ++ +....+....+. .|...+++++|+|++.+|++++.||.|++||+.+.........      .|..+|.+++|+|. 
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~------~h~~~v~~~~~~p~~  217 (287)
T d1pgua2         144 QVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA------FRTSKINAISWKPAE  217 (287)
T ss_dssp             EEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC------CCSSCEEEEEECCCC
T ss_pred             eeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccccccccccc------ccccccceeeecccc
Confidence            88 554444433333 5778899999999999999999999999999987655432111      17888999999874 


Q ss_pred             ---------CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccce
Q psy15191        238 ---------SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAA  308 (312)
Q Consensus       238 ---------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~  308 (312)
                               +.+|++|+.|+.|++||+..+..           .+..+.+|...|++++|+|++ .|+++|.|+     +
T Consensus       218 ~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~-----------~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~-----~  280 (287)
T d1pgua2         218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-----------IIKALNAHKDGVNNLLWETPS-TLVSSGADA-----C  280 (287)
T ss_dssp             ------CCSCCEEEEEETTSCEEEEESSCTTC-----------CEEETTSSTTCEEEEEEEETT-EEEEEETTS-----C
T ss_pred             cccccccCCCCeeEeecCCCeEEEEECCCCCe-----------EEEEeCCCCCCeEEEEECCCC-EEEEEECCC-----e
Confidence                     46899999999999999977532           567778999999999999986 588895555     4


Q ss_pred             EEeC
Q psy15191        309 IIIW  312 (312)
Q Consensus       309 i~iW  312 (312)
                      |++|
T Consensus       281 v~iW  284 (287)
T d1pgua2         281 IKRW  284 (287)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9999

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-32  Score=224.69  Aligned_cols=253  Identities=13%  Similarity=0.101  Sum_probs=176.8

Q ss_pred             EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------------c---cccc-CCCCC
Q psy15191         41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------------P---YHMR-DDSKQ   99 (312)
Q Consensus        41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------------~---~~~~-~~~~~   99 (312)
                      ...++|.+.|+++++++        ++++|+|.|++|+|||..+.+...                 +   .... .....
T Consensus         8 ~~~~~H~~~I~~v~~~~--------~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--------SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFEL   79 (393)
T ss_dssp             EESSCSSSCEEEEEECS--------SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEE
T ss_pred             ecCCcccCccEEEEEeC--------CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCC
Confidence            45679999999999754        489999999999999976654210                 0   0001 12233


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcceeee---eeeecccCCCccceeEEEECCC-----CCeEEEeecCCeEEEecccCceee
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGLWLE---TARVGEVGGNTLGFYGCKFGPR-----GDYIIAHGFQGSLHLDVTTWKQIQ  171 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~~~i~~d~~~~~~~~  171 (312)
                      ..+++++.||.|++|++.........   .........+...+..+++.++     +.++++++.||.+++    |++..
T Consensus        80 ~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~v----w~~~~  155 (393)
T d1sq9a_          80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYI----WKFHP  155 (393)
T ss_dssp             EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEE----EEEES
T ss_pred             cEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEE----EEeec
Confidence            46788999999999987643322111   1111122234455777788765     467899999999999    44321


Q ss_pred             e-----------------------ecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee
Q psy15191        172 T-----------------------LPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI  228 (312)
Q Consensus       172 ~-----------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~  228 (312)
                      .                       ...+...+.+++|+|++ +|++|+.|+.|++||+.+.+.+..+..... ...|..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~-l~~h~~~  233 (393)
T d1sq9a_         156 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS-MINNSNS  233 (393)
T ss_dssp             SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC----CCCCC
T ss_pred             CCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccc-cccccce
Confidence            1                       11455668899999997 889999999999999998887776654322 2238899


Q ss_pred             eEEEEEcCCCceEEEeccCC---eEEEEecCCCCCCccccc-ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc
Q psy15191        229 IWGVAWSHDSRYFLTISRDG---VCVVWGLGEPPTEEDLVQ-NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP  304 (312)
Q Consensus       229 v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~  304 (312)
                      |++++|+|+|++|++|+.|+   .|++||+.++.....+.. ....+....+.+|...|++++|+|++++|++||.|++ 
T Consensus       234 V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~-  312 (393)
T d1sq9a_         234 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK-  312 (393)
T ss_dssp             EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE-
T ss_pred             EEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCE-
Confidence            99999999999999999987   599999988753222110 1111233445689999999999999999999955555 


Q ss_pred             ccceEEeC
Q psy15191        305 EHAAIIIW  312 (312)
Q Consensus       305 ~dg~i~iW  312 (312)
                          |+||
T Consensus       313 ----v~vW  316 (393)
T d1sq9a_         313 ----LRFW  316 (393)
T ss_dssp             ----EEEE
T ss_pred             ----EEEE
Confidence                9999

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.6e-32  Score=217.75  Aligned_cols=243  Identities=21%  Similarity=0.251  Sum_probs=193.3

Q ss_pred             CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeC
Q psy15191         36 GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSM  107 (312)
Q Consensus        36 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~  107 (312)
                      ..+..++|+||.++|++++|+|+      +++||||+.||+|+|||+.+++..        .+..+.+.+++.++++++.
T Consensus        44 ~~~~~~tL~GH~~~I~~l~~s~~------~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~  117 (340)
T d1tbga_          44 QMRTRRTLRGHLAKIYAMHWGTD------SRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL  117 (340)
T ss_dssp             CCCEEEEECCCSSCEEEEEECTT------SSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEET
T ss_pred             ceeeeEEECCCCCCEEEEEECCC------CCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecc
Confidence            35678899999999999999999      999999999999999999887652        3455566888899999999


Q ss_pred             CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      |+.+.+|+...........   ..+.+|......... ..+..+.....+..... .............+...+....+.
T Consensus       118 d~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (340)
T d1tbga_         118 DNICSIYNLKTREGNVRVS---RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA  193 (340)
T ss_dssp             TCCEEEEESSSSCSCCCEE---EEECCCSSCEEEEEE-EETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred             cceeecccccccccccccc---eeccccccccccccc-ccccccccccccccccccccccccccccccccceeEeeeccc
Confidence            9999999987643322211   122345444444433 44556777777777776 555555555666778889999999


Q ss_pred             CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191        187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ  266 (312)
Q Consensus       187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  266 (312)
                      +.+.++++++.|+.|++||+++.+....+..       |...|++++|+|++++|++|+.||.|++||+....       
T Consensus       194 ~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~-------h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~-------  259 (340)
T d1tbga_         194 PDTRLFVSGACDASAKLWDVREGMCRQTFTG-------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-------  259 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------
T ss_pred             cccceeEEeecCceEEEEECCCCcEEEEEeC-------CCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccc-------
Confidence            9999999999999999999998888777665       88889999999999999999999999999998763       


Q ss_pred             ccccceeEE--eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        267 NTLWPEVQK--LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       267 ~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                           .+..  ...+...|.+++|+|++++|++|+.|+.     |++|
T Consensus       260 -----~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~-----i~iw  297 (340)
T d1tbga_         260 -----ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-----CNVW  297 (340)
T ss_dssp             -----EEEEECCTTCCSCEEEEEECSSSCEEEEEETTSC-----EEEE
T ss_pred             -----cccccccccccCceEEEEECCCCCEEEEEECCCE-----EEEE
Confidence                 2232  3456778999999999999999955555     9998

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-30  Score=205.35  Aligned_cols=246  Identities=20%  Similarity=0.327  Sum_probs=190.6

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc------cccCCCCCceEEEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY------HMRDDSKQLHLLSC  105 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~------~~~~~~~~~~l~~~  105 (312)
                      |+.++++++.++++|.++|++++|  +      +++|++|+.|+.|++|++..+......      ..........++++
T Consensus        40 Wd~~~~~~~~~l~~H~~~V~~v~~--~------~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (293)
T d1p22a2          40 WDKNTLECKRILTGHTGSVLCLQY--D------ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTC  111 (293)
T ss_dssp             EESSSCCEEEEECCCSSCEEEEEC--C------SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEE
T ss_pred             EECCCCcEEEEEecCCCCEeeeec--c------cceeecccccccccccccccccccccccccccccccccccccceeec
Confidence            999999999999999999999987  3      569999999999999999887652111      11112334478999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA  184 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~  184 (312)
                      ..++.+.+|+...........    ....+...+..+.+.  ...+++++.|+.+++ |.++.+....+.++...+..+.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~  185 (293)
T d1p22a2         112 SKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ  185 (293)
T ss_dssp             ETTSCEEEEECSSSSCCEEEE----EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred             ccccceeEeeccccccccccc----cccccccccccceec--ccccccccCCCceeeecCCCCcEEEEEccccccccccc
Confidence            999999999998754332222    224566777766664  456888999999999 9998888888888888888887


Q ss_pred             ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      ++  +.++++++.|+.|++||+++...+.....       +...+..  +++++.+|++++.||.|++||+.........
T Consensus       186 ~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~  254 (293)
T d1p22a2         186 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-------HEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAP  254 (293)
T ss_dssp             EE--TTEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSC
T ss_pred             CC--CCeEEEecCCCEEEEEecccceeeeeecc-------cceeeee--ccccceEEEEEcCCCEEEEEECCCCcccccc
Confidence            75  56899999999999999999888776664       4455554  5668899999999999999998654332211


Q ss_pred             ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                         ....++..+.+|.+.|++++|+  +++|++|     +.||+|+||
T Consensus       255 ---~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~-----s~Dg~i~iW  292 (293)
T d1p22a2         255 ---AGTLCLRTLVEHSGRVFRLQFD--EFQIVSS-----SHDDTILIW  292 (293)
T ss_dssp             ---TTTTEEEEECCCSSCCCCEEEC--SSCEEEC-----CSSSEEEEE
T ss_pred             ---CCceeeEEecCCCCCEEEEEEc--CCEEEEE-----ecCCEEEEe
Confidence               1123678889999999999984  5789999     455559999

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.9e-31  Score=210.31  Aligned_cols=225  Identities=13%  Similarity=0.173  Sum_probs=170.8

Q ss_pred             CeEEEEeccCCCceEEEEEeCC-------------------CCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191         14 GKVLYTLTNHKSKVMAVKWNGE-------------------GGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSL   73 (312)
Q Consensus        14 ~~~~~~~~~h~~~v~~~~w~~~-------------------~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~   73 (312)
                      |+..+++.||+..|++++|+++                   ++++++.+. +|...|++++|+|+      ++ +++++.
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~------g~-~~~~~~   74 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK------GD-LFTVSW   74 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT------SC-EEEEET
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecc------ce-eecccc
Confidence            6788899999999999985554                   456666664 68999999999998      65 556677


Q ss_pred             CCcEEEeeecCCcc------------------------------------------------cccccccCCCCCceEEEE
Q psy15191         74 DKTAILWKYVSEGN------------------------------------------------YLPYHMRDDSKQLHLLSC  105 (312)
Q Consensus        74 dg~i~vw~~~~~~~------------------------------------------------~~~~~~~~~~~~~~l~~~  105 (312)
                      |+.+++|+......                                                .......+++++.+++++
T Consensus        75 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  154 (299)
T d1nr0a2          75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG  154 (299)
T ss_dssp             TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred             eeeEEEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999998754321                                                011122335677789999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee---eecccCCcee
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ---TLPCHQLTIT  181 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~---~~~~~~~~v~  181 (312)
                      +.|+.|++||+++.+......      ..|...|.+++|+|++++|++++.++.+++ |..+.....   .+..|...|+
T Consensus       155 ~~dg~i~~~d~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~  228 (299)
T d1nr0a2         155 GQDSKVHVYKLSGASVSEVKT------IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA  228 (299)
T ss_dssp             ETTSEEEEEEEETTEEEEEEE------EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred             ccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999998744322221      246788999999999999999999999999 665544332   3447889999


Q ss_pred             EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      +++|+|++++|++|+.||.|++||+++............    +...+.++.| +++++|++++.|+.|++||+.
T Consensus       229 ~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         229 CVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH----AMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSS----TTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             cccccccccceEEEcCCCEEEEEECCCCCcceEEEecCC----CCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            999999999999999999999999987655433332211    4455666655 567899999999999999984

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-30  Score=214.28  Aligned_cols=217  Identities=14%  Similarity=0.197  Sum_probs=156.8

Q ss_pred             CceEEEecCCCcEEEeeecCCccc---------------------cccccc--CCCCCceEEEEeCCCcEEEEcCCCCcc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY---------------------LPYHMR--DDSKQLHLLSCSMDKSIIVWAPDPTTG  121 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~---------------------~~~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~  121 (312)
                      +.++++++.||.|++|++......                     .+.+..  ....+.++++++.||.+++|++.....
T Consensus        79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~  158 (393)
T d1sq9a_          79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD  158 (393)
T ss_dssp             EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred             CcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCc
Confidence            357889999999999998655431                     011111  122346789999999999999753211


Q ss_pred             -----------eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee------cccCCceeEE
Q psy15191        122 -----------LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL------PCHQLTITQL  183 (312)
Q Consensus       122 -----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~------~~~~~~v~~~  183 (312)
                                 .............+...+.+++|+|++ +|++|+.|+.|++ |+.+.+....+      .+|...|+++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l  237 (393)
T d1sq9a_         159 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV  237 (393)
T ss_dssp             HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred             ccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEc
Confidence                       011111222333455668899999998 8899999999999 77666554433      3789999999


Q ss_pred             EECCCCCEEEEEecCC---eEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        184 AFSPDDTHLVSVSRDR---RWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       184 ~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      +|+|+|++|++|+.|+   .|++||+++.+.+..+......      ...|...|++++|+|++++|++++.|++|++||
T Consensus       238 ~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD  317 (393)
T ss_dssp             EECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             ccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEE
Confidence            9999999999999987   4999999998887776533211      123889999999999999999999999999999


Q ss_pred             cCCCCCCcccccccccceeEEeeccCccee----EEEeccCCCe
Q psy15191        255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIY----SLAASHDGTL  294 (312)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~~~s~~~~~  294 (312)
                      +.++.            ++.++.+|...|.    .++|+|++..
T Consensus       318 ~~~g~------------~~~~l~gH~~~v~~~~~~~~~~~~~~~  349 (393)
T d1sq9a_         318 VKTKE------------RITTLNMHCDDIEIEEDILAVDEHGDS  349 (393)
T ss_dssp             TTTTE------------EEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred             CCCCC------------EEEEECCcCCcccCCccEEEECCCCCE
Confidence            98873            6778888876554    2445554433

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=3.3e-30  Score=206.63  Aligned_cols=237  Identities=9%  Similarity=0.008  Sum_probs=178.5

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecCCC-cEEEeeecCCcc-----------cccccccCCC--CCceEEEEeCCCcEEEE
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSLDK-TAILWKYVSEGN-----------YLPYHMRDDS--KQLHLLSCSMDKSIIVW  114 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg-~i~vw~~~~~~~-----------~~~~~~~~~~--~~~~l~~~~~d~~i~i~  114 (312)
                      .+++++|+|+      ++.|+.++.+. .|+.|+......           ..+....++|  ++.+|++++.||+|++|
T Consensus        19 ~~t~l~~~~~------~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iW   92 (325)
T d1pgua1          19 FTTHLSYDPT------TNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW   92 (325)
T ss_dssp             CCCCCEEETT------TTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred             CeEEEEECCC------CCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEe
Confidence            5678899998      88888876543 456676543321           1234445554  55689999999999999


Q ss_pred             cCCCCcceeeeee-eecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191        115 APDPTTGLWLETA-RVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT  190 (312)
Q Consensus       115 d~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~  190 (312)
                      |+...+....... .......+..+|.+++|+++++++++++.  ++.+.+ +..+.+....+.+|...|.+++|+|++.
T Consensus        93 d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  172 (325)
T d1pgua1          93 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP  172 (325)
T ss_dssp             EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSS
T ss_pred             eecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeeccccccccccccccc
Confidence            9876433222111 11223467788999999999999887764  455666 7777778888889999999999999887


Q ss_pred             E-EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCCCccccccc
Q psy15191        191 H-LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQNT  268 (312)
Q Consensus       191 ~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  268 (312)
                      + +++++.|+.+++||....+.........    .|...|++++|+|+ +.+|++++.||.|++||++++.         
T Consensus       173 ~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~----~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~---------  239 (325)
T d1pgua1         173 MRSMTVGDDGSVVFYQGPPFKFSASDRTHH----KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE---------  239 (325)
T ss_dssp             CEEEEEETTTEEEEEETTTBEEEEEECSSS----CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC---------
T ss_pred             ceEEEeecccccccccccccccceeccccc----CCCCccEEeeeccccceeccccccccceeeeeecccc---------
Confidence            5 6789999999999998765554443322    27788999999996 6889999999999999988763         


Q ss_pred             ccceeEEeeccCcceeEEEec---cCCCeEEEEecCCCcccceEEeC
Q psy15191        269 LWPEVQKLYGHGYEIYSLAAS---HDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       269 ~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                         .+..+.+|..++.++.|+   |+|++|++++.|+     .|+||
T Consensus       240 ---~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~-----~i~iw  278 (325)
T d1pgua1         240 ---FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA-----TIRVW  278 (325)
T ss_dssp             ---EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS-----EEEEE
T ss_pred             ---ccccccccccccccceeeeeccCCCEEEEEeCCC-----eEEEE
Confidence               678888898888777766   7899999995554     49998

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=7.2e-29  Score=198.99  Aligned_cols=270  Identities=11%  Similarity=0.105  Sum_probs=184.2

Q ss_pred             eEEEEeccCCCceEEEEEeCCCC-------------------ce---EEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191         15 KVLYTLTNHKSKVMAVKWNGEGG-------------------KV---LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS   72 (312)
Q Consensus        15 ~~~~~~~~h~~~v~~~~w~~~~~-------------------~~---~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~   72 (312)
                      |.+...++|++.|++++|++++.                   ..   +....+|..+|++++|+|+     ++.+|++|+
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~-----~~~~l~sg~   76 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN-----TDLQIYVGT   76 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES-----SSEEEEEEE
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCC-----CCCEEEEcc
Confidence            56777788888888888777542                   11   1223369999999999986     246899999


Q ss_pred             CCCcEEEeeecCCccccc---------ccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191         73 LDKTAILWKYVSEGNYLP---------YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK  143 (312)
Q Consensus        73 ~dg~i~vw~~~~~~~~~~---------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~  143 (312)
                      .||.|++|++........         ......++...+++++.++.+++||++............ ...........+.
T Consensus        77 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~  155 (342)
T d1yfqa_          77 VQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL-NSNNTKVKNKIFT  155 (342)
T ss_dssp             TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEES-CSSSSSSCCCEEE
T ss_pred             cccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeeccc-ccccccceeeeee
Confidence            999999999987665211         111123345589999999999999987533322222111 1112233345567


Q ss_pred             ECCCCCeEEEeecCCeEEE-ecccCceeeee---cccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeE------
Q psy15191        144 FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL---PCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRL------  212 (312)
Q Consensus       144 ~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~---~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~------  212 (312)
                      +.+.+..+++++.|+.+++ ++.........   ..+...+.+..+.+ ++..+++++.||.+.+|+.......      
T Consensus       156 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~  235 (342)
T d1yfqa_         156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR  235 (342)
T ss_dssp             EEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred             eeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccc
Confidence            7888999999999999999 55444332222   23444555555554 6788999999999999998753221      


Q ss_pred             EEEec--cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc
Q psy15191        213 SLVAC--SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH  290 (312)
Q Consensus       213 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  290 (312)
                      .....  .......|...+++++|+|++++||+|+.||.|++||+.++.            .+..+..+ ..+..++|+|
T Consensus       236 ~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~------------~l~~~~~~-~~~~~~~~s~  302 (342)
T d1yfqa_         236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK------------KIKNFAKF-NEDSVVKIAC  302 (342)
T ss_dssp             EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE------------EEEECCCC-SSSEEEEEEE
T ss_pred             ceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc------------EEEEecCC-CCCEEEEEEe
Confidence            11111  111122267789999999999999999999999999998763            45555432 3445678889


Q ss_pred             CCCeEEEEecCCC
Q psy15191        291 DGTLLASACKATK  303 (312)
Q Consensus       291 ~~~~l~s~s~d~~  303 (312)
                      ++++|++|+.|..
T Consensus       303 ~~~~l~~a~sdd~  315 (342)
T d1yfqa_         303 SDNILCLATSDDT  315 (342)
T ss_dssp             CSSEEEEEEECTH
T ss_pred             CCCEEEEEEcCCc
Confidence            9999999976654

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.8e-28  Score=196.75  Aligned_cols=231  Identities=18%  Similarity=0.232  Sum_probs=172.9

Q ss_pred             EEEEccccCcE-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCc
Q psy15191         40 LYTLTNHKSKV-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        40 ~~~~~~h~~~v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      ..+|+||...| +|++|  +      +++|+||+.||+|+|||+.+++...        +..+.+++ +.+|++++.|+.
T Consensus         5 ~~tL~GH~~~vitc~~~--~------~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~-~~~l~s~s~D~~   75 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQF--E------DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVSGSTDRT   75 (355)
T ss_dssp             EEEEECCSSSCEEEEEE--E------TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEET-TTEEEEEETTCC
T ss_pred             cEEECCcCCCcEEEEEE--C------CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcC-CCEEEEEecccc
Confidence            56799999886 55554  5      6799999999999999998877632        22333344 348999999999


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec---------------
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP---------------  174 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~---------------  174 (312)
                      |++|++...+.......     ..+........+.++++.+++++.|+.+++ |+.+........               
T Consensus        76 i~iw~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (355)
T d1nexb2          76 VRVWDIKKGCCTHVFEG-----HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN  150 (355)
T ss_dssp             EEEEETTTTEEEEEECC-----CSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTC
T ss_pred             ccccccccccccccccc-----ccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccc
Confidence            99999987543322221     234445566778899999999999999999 544332221111               


Q ss_pred             --------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        175 --------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       175 --------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                              .|...+  ..+.+++++++++..|+.|++||+++.+.+.....       +...+.++.|+|++.++++++.
T Consensus       151 ~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  221 (355)
T d1nexb2         151 PYFVGVLRGHMASV--RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG-------HTDRIYSTIYDHERKRCISASM  221 (355)
T ss_dssp             TTEEEEEECCSSCE--EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEEEEEEETTTTEEEEEET
T ss_pred             cceeeeeeeccccc--cccccccceeeeecccceeeeeecccccceeeeec-------cccccccccccccceeeecccc
Confidence                    222333  33456789999999999999999998877766554       5666889999999999999999


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      |+.|++||+.++.            .+..+.+|...|.+++|++  ++|++|+     .||.|++|
T Consensus       222 d~~i~i~d~~~~~------------~~~~~~~h~~~v~~~~~~~--~~l~~~~-----~dg~i~iw  268 (355)
T d1nexb2         222 DTTIRIWDLENGE------------LMYTLQGHTALVGLLRLSD--KFLVSAA-----ADGSIRGW  268 (355)
T ss_dssp             TSCEEEEETTTCC------------EEEEECCCSSCCCEEEECS--SEEEEEC-----TTSEEEEE
T ss_pred             cceEEeeeccccc------------ccccccccccccccccccc--ceeeeee-----cccccccc
Confidence            9999999998773            6788899999999999875  6899995     45559998

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-28  Score=195.56  Aligned_cols=242  Identities=17%  Similarity=0.249  Sum_probs=174.4

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------ccccCCCCCceEE
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------YHMRDDSKQLHLL  103 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------~~~~~~~~~~~l~  103 (312)
                      |+....++.+.|+||.+.|.+ +++++      |++||||+.||+|+|||+.+++....        ....+.+  .+++
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s-~~~~~------g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~--~~l~   71 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVIT-CLQFC------GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIII   71 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEE-EEEEE------TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET--TEEE
T ss_pred             CCCCCCCcCEEECCcCCceEE-EEEEC------CCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCC--Cccc
Confidence            556677888999999999865 46667      78999999999999999998876322        2223333  3899


Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeec------------------------ccCC-------CccceeEEEECCCCCeEE
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVG------------------------EVGG-------NTLGFYGCKFGPRGDYII  152 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~------------------------~~~~-------~~~~v~~~~~~~~~~~l~  152 (312)
                      +++.|+.+++|+...............                        ....       ...........+....++
T Consensus        72 s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (342)
T d2ovrb2          72 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV  151 (342)
T ss_dssp             EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEE
T ss_pred             cceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceee
Confidence            999999999999876433221110000                        0000       000011123344566788


Q ss_pred             EeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEE
Q psy15191        153 AHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG  231 (312)
Q Consensus       153 ~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~  231 (312)
                      .++.++.+++ |.+.......+.+|...+..+.+  ++.++++++.||.|++||++..+.+.....       |...+.+
T Consensus       152 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~-------~~~~v~~  222 (342)
T d2ovrb2         152 SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-------HQSLTSG  222 (342)
T ss_dssp             EEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-------CCSCEEE
T ss_pred             eecCCCeEEEeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecc-------cccceeE
Confidence            8999999999 88888888888888777666554  688999999999999999999888776665       6777887


Q ss_pred             EEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee---ccCcceeEEEeccCCCeEEEEecCCCcccce
Q psy15191        232 VAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY---GHGYEIYSLAASHDGTLLASACKATKPEHAA  308 (312)
Q Consensus       232 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~  308 (312)
                      ++++  +++|++++.||.|++||+....            ....+.   .|...+.+++++  ++++++|+     +||.
T Consensus       223 ~~~~--~~~l~s~s~d~~i~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s-----~Dg~  281 (342)
T d2ovrb2         223 MELK--DNILVSGNADSTVKIWDIKTGQ------------CLQTLQGPNKHQSAVTCLQFN--KNFVITSS-----DDGT  281 (342)
T ss_dssp             EEEE--TTEEEEEETTSCEEEEETTTCC------------EEEEECSTTSCSSCEEEEEEC--SSEEEEEE-----TTSE
T ss_pred             EecC--CCEEEEEcCCCEEEEEeccccc------------ccccccccceeeeceeecccC--CCeeEEEc-----CCCE
Confidence            7775  4699999999999999998763            333343   355666666665  56999995     4555


Q ss_pred             EEeC
Q psy15191        309 IIIW  312 (312)
Q Consensus       309 i~iW  312 (312)
                      |+||
T Consensus       282 i~iw  285 (342)
T d2ovrb2         282 VKLW  285 (342)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9998

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.9e-29  Score=197.50  Aligned_cols=226  Identities=15%  Similarity=0.064  Sum_probs=168.4

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---ccccccCCCCCceEEEEeCCCcEEE
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---LPYHMRDDSKQLHLLSCSMDKSIIV  113 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i  113 (312)
                      .+++++|+||.++|++++|+|          |+||+.||+|++||+.++...   .+....+.+ +..+++++.|+++++
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----------l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~~-~~~~~s~s~D~~v~~   71 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----------LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK-AQEYSSISWDDTLKV   71 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----------TEEEETTSCEEETTTTEEECCCCSCEEEEECCS-TTCCEEEETTTEEEE
T ss_pred             cceeEEECCCCCceEEEEECc----------EEEEeCCCeEEEEECCCCCCCCCCCEEEEEecC-CCeEEEEeecccccc
Confidence            468899999999999999832          899999999999998765431   223333343 347899999999999


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEE
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  193 (312)
                      |++...+              ....+..+.+++++..++++..++.+.++..+.+....+. +...+  .+++++++.++
T Consensus        72 w~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~  134 (287)
T d1pgua2          72 NGITKHE--------------FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR-LNSPG--SAVSLSQNYVA  134 (287)
T ss_dssp             TTEEEEE--------------CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCE--EEEEECSSEEE
T ss_pred             ccccccc--------------cccceeeeeeccCCceEEEeecccceeeeccceeeeeecc-cccee--eeeeccCccee
Confidence            9876411              1234677889999888877666655544777777766665 33333  45667788888


Q ss_pred             EEecCC-eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccce
Q psy15191        194 SVSRDR-RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPE  272 (312)
Q Consensus       194 ~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  272 (312)
                      +++.++ .+++|++...+........      +...+++++|+|++.+|++|+.||.|++||+..+..           .
T Consensus       135 v~~~~~~~v~~~~~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-----------~  197 (287)
T d1pgua2         135 VGLEEGNTIQVFKLSDLEVSFDLKTP------LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-----------K  197 (287)
T ss_dssp             EEETTTSCEEEEETTEEEEEEECSSC------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----------E
T ss_pred             eeccccceeeeeeccccceeeeeeec------cCCceeEEEeccCccccccccccccccceeeccccc-----------c
Confidence            887775 6999998755444333222      667899999999999999999999999999987631           2


Q ss_pred             eEEeeccCcceeEEEeccC----------CCeEEEEecCCCcccceEEeC
Q psy15191        273 VQKLYGHGYEIYSLAASHD----------GTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       273 ~~~~~~~~~~v~~~~~s~~----------~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ...+.+|...|.+++|+|.          +.+|++|+.|+.     |+||
T Consensus       198 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~-----i~iw  242 (287)
T d1pgua2         198 TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN-----IFIY  242 (287)
T ss_dssp             ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC-----EEEE
T ss_pred             cccccccccccceeeecccccccccccCCCCeeEeecCCCe-----EEEE
Confidence            3345689999999999875          468999965555     9998

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.8e-28  Score=194.11  Aligned_cols=254  Identities=12%  Similarity=0.053  Sum_probs=174.7

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------cccccccCCC-CCceEEEE
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------YLPYHMRDDS-KQLHLLSC  105 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~-~~~~l~~~  105 (312)
                      +.+...++|.+.|++|+|+|+      +++||+|+.||+|+|||++....           ..+..+.+.+ .+.++++|
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~------~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg   75 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPS------KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG   75 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGG------GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred             CeEEcCCCCCCCEEEEEEeCC------CCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEc
Confidence            567778899999999999999      89999999999999999976543           1233333443 34589999


Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec------ccCC
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP------CHQL  178 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~------~~~~  178 (312)
                      +.|+.|++|++..........      ..+........+.++...+++++.++.+++ |+++........      ....
T Consensus        76 ~~d~~v~~w~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~  149 (342)
T d1yfqa_          76 TVQGEILKVDLIGSPSFQALT------NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV  149 (342)
T ss_dssp             ETTSCEEEECSSSSSSEEECB------SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred             ccccceeeeeccccccccccc------ccccccccccccccccccccccccccccceeeccccccceeeecccccccccc
Confidence            999999999998754322211      123333445566778889999999999999 444332222211      1223


Q ss_pred             ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE-cCCCceEEEeccCCeEEEEecCC
Q psy15191        179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW-SHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ....+.+.+++..+++++.|+.|++||++.............    ....+.+..+ .+++..+++++.||.+.+|++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~  225 (342)
T d1yfqa_         150 KNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG----LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD  225 (342)
T ss_dssp             CCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS----CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred             eeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecc----cccceeeeEeecCCCCEEEeecCCCeEEEEEecC
Confidence            345667778889999999999999999987654433222111    2233444444 45678899999999999999876


Q ss_pred             CCCCcccccccc---cceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        258 PPTEEDLVQNTL---WPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       258 ~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ............   .+......+|...|++++|+|++++||+|+.|+.     |+||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~-----v~vW  278 (342)
T d1yfqa_         226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-----ISCW  278 (342)
T ss_dssp             TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----EEEE
T ss_pred             CcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCE-----EEEE
Confidence            543322211110   1112223457778999999999999999965555     9999

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.95  E-value=2.7e-27  Score=191.73  Aligned_cols=263  Identities=12%  Similarity=0.038  Sum_probs=183.4

Q ss_pred             EeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCc
Q psy15191          9 VNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEG   86 (312)
Q Consensus         9 ~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~   86 (312)
                      +++.+|+.+......  .|  ..|+..+++.++ + +|...|.+++|+|+      |++|++++.+.  .|++||.++++
T Consensus        10 fSP~dG~~~a~~~~g--~v--~v~d~~~~~~~~-~-~~~~~v~~~~~spD------g~~l~~~~~~~g~~v~v~d~~~~~   77 (360)
T d1k32a3          10 FSPLDGDLIAFVSRG--QA--FIQDVSGTYVLK-V-PEPLRIRYVRRGGD------TKVAFIHGTREGDFLGIYDYRTGK   77 (360)
T ss_dssp             EEECGGGCEEEEETT--EE--EEECTTSSBEEE-C-SCCSCEEEEEECSS------SEEEEEEEETTEEEEEEEETTTCC
T ss_pred             ccCCCCCEEEEEECC--eE--EEEECCCCcEEE-c-cCCCCEEEEEECCC------CCEEEEEEcCCCCEEEEEECCCCc
Confidence            556678888766543  33  348888877665 3 69999999999999      99988776553  79999998876


Q ss_pred             cc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee----
Q psy15191         87 NY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG----  155 (312)
Q Consensus        87 ~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----  155 (312)
                      ..       .+....+++++.++++++.++.+++|++.+.+...  ..     ..+...+.+++|+|+|++|+.+.    
T Consensus        78 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~spdg~~la~~~~~~~  150 (360)
T d1k32a3          78 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV--IE-----RSREAMITDFTISDNSRFIAYGFPLKH  150 (360)
T ss_dssp             EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--EE-----ECSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred             EEEeeCCCceEEeeeecccccccceeccccccccccccccceee--ee-----ecccccccchhhccceeeeeeeccccc
Confidence            52       34455678999999999999999999998754322  22     25667788999999999998654    


Q ss_pred             ------cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe-------EEEEeccCCC
Q psy15191        156 ------FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR-------LSLVACSDKT  221 (312)
Q Consensus       156 ------~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~  221 (312)
                            .++.+++ +..+.+..... .+...+..++|+|||++|++++.++.+.+||......       ...+......
T Consensus       151 ~~~~~~~~~~~~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  229 (360)
T d1k32a3         151 GETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGS  229 (360)
T ss_dssp             STTCSCCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTC
T ss_pred             cceeeccccceeeeccccCceeeec-ccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCc
Confidence                  3345666 66655544333 4677889999999999999999999999998754321       1111110000


Q ss_pred             --------------------C---------cccceeeEEEEEcCC-------------CceEEEeccCCeEEEEecCCCC
Q psy15191        222 --------------------N---------GVHKRIIWGVAWSHD-------------SRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       222 --------------------~---------~~~~~~v~~~~~~~~-------------~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                                          .         .........+...++             +.++++++.++.|++||+..+.
T Consensus       230 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  309 (360)
T d1k32a3         230 PNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK  309 (360)
T ss_dssp             CCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC
T ss_pred             cccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe
Confidence                                0         001112222332222             2345667778899999987752


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                                   ..   .|.+.|.+++|||||++|++++.|+.     |++|
T Consensus       310 -------------~~---~~~~~v~~~~~SpDG~~l~~~~~Dg~-----i~v~  341 (360)
T d1k32a3         310 -------------VT---EVKNNLTDLRLSADRKTVMVRKDDGK-----IYTF  341 (360)
T ss_dssp             -------------EE---EEEEEEEEEEECTTSCEEEEEETTSC-----EEEE
T ss_pred             -------------EE---EecCCcCEEEECCCCCEEEEEECCCe-----EEEE
Confidence                         22   34556899999999999999965555     9997

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.7e-24  Score=179.48  Aligned_cols=271  Identities=7%  Similarity=-0.020  Sum_probs=182.1

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------ccccccCCCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDDSK   98 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~~~   98 (312)
                      ||..+++++.++..|. .+..++|+|+      |++|++++.|++|++||+.+++..             .+....++++
T Consensus        47 wD~~t~~~~~~l~~g~-~~~~vafSPD------Gk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spD  119 (426)
T d1hzua2          47 VDGDSKKIVKVIDTGY-AVHISRMSAS------GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYE  119 (426)
T ss_dssp             EETTTCSEEEEEECCS-SEEEEEECTT------SCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCT
T ss_pred             EECCCCcEEEEEeCCC-CeeEEEECCC------CCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCC
Confidence            9999999999999874 6999999999      999999999999999999887642             1123345678


Q ss_pred             CceE-EEEeCCCcEEEEcCCCCcceeeeeeeecc----cCCCccceeEEEECCCCCeEEEeecC-CeEEE-ecccCce-e
Q psy15191         99 QLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGE----VGGNTLGFYGCKFGPRGDYIIAHGFQ-GSLHL-DVTTWKQ-I  170 (312)
Q Consensus        99 ~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~-d~~~~~~-~  170 (312)
                      +.++ +++..++.+.+||..+.............    ...+......+.+++++..++....+ +.+.+ +..+... .
T Consensus       120 G~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~  199 (426)
T d1hzua2         120 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT  199 (426)
T ss_dssp             TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCE
T ss_pred             CCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEecccccee
Confidence            8876 45568899999999986543322211111    01233445667888888877765543 44444 4333332 2


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCCC----------------------------
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDKT----------------------------  221 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~----------------------------  221 (312)
                      .....+...+..+.|+|++++++++.. +..+.+++..+.+...........                            
T Consensus       200 ~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  279 (426)
T d1hzua2         200 VTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSIS  279 (426)
T ss_dssp             EEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEE
T ss_pred             eEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEE
Confidence            223357778899999999998877764 466888887764443322211000                            


Q ss_pred             -------------------CcccceeeEEEEEcCCCceEEE-------eccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        222 -------------------NGVHKRIIWGVAWSHDSRYFLT-------ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       222 -------------------~~~~~~~v~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                                         ...|...+..++|+|++++|++       ++.|++|+|||+.++..........   ....
T Consensus       280 ~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~---~~~~  356 (426)
T d1hzua2         280 LIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA---EWAD  356 (426)
T ss_dssp             EEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH---HHHC
T ss_pred             EeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccc---hhcc
Confidence                               0115667889999999999994       5668899999998875432211100   0112


Q ss_pred             eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +..|...|.+++|||||++++.++....+++|.|+||
T Consensus       357 ~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~  393 (426)
T d1hzua2         357 LGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVV  393 (426)
T ss_dssp             CCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEE
T ss_pred             cCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEE
Confidence            3346677999999999997755443333578889988

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-24  Score=168.14  Aligned_cols=226  Identities=17%  Similarity=0.229  Sum_probs=168.4

Q ss_pred             ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCC
Q psy15191         38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~  109 (312)
                      +.+....+|...|+|++|  +      +++||||+.||+|+|||+.+++...        +..+.  .++.+|++++.|+
T Consensus         6 ~~i~~~~~~~~~V~c~~~--d------~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~--~~~~~l~s~s~D~   75 (293)
T d1p22a2           6 QRIHCRSETSKGVYCLQY--D------DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ--YDERVIITGSSDS   75 (293)
T ss_dssp             CCEECCCSSCCCEEEEEC--C------SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEE--CCSSEEEEEETTS
T ss_pred             EEEeccCCCCCCEEEEEE--c------CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeee--cccceeecccccc
Confidence            345566778899998765  5      7799999999999999999887632        22222  3566999999999


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce---eeeecccCCceeEEEE
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ---IQTLPCHQLTITQLAF  185 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~---~~~~~~~~~~v~~~~~  185 (312)
                      .|++|++..........       ...  .....+.+....++++..++.+.+ +..+...   ...+..|...+..+.+
T Consensus        76 ~i~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  146 (293)
T d1p22a2          76 TVRVWDVNTGEMLNTLI-------HHC--EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF  146 (293)
T ss_dssp             CEEEEESSSCCEEEEEC-------CCC--SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred             ccccccccccccccccc-------ccc--cccccccccccceeecccccceeEeecccccccccccccccccccccccee
Confidence            99999998754322211       111  223445567778999999999998 5544332   2234467888887777


Q ss_pred             CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191        186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV  265 (312)
Q Consensus       186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  265 (312)
                      .  ...+++++.|+.|++||+++.+.+..+..       +...+..+.++  +.++++++.||.|++||+....      
T Consensus       147 ~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~-------~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~------  209 (293)
T d1p22a2         147 D--DKYIVSASGDRTIKVWNTSTCEFVRTLNG-------HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA------  209 (293)
T ss_dssp             E--TTEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC------
T ss_pred             c--ccccccccCCCceeeecCCCCcEEEEEcc-------cccccccccCC--CCeEEEecCCCEEEEEecccce------
Confidence            5  45788999999999999999888877765       55567666664  5789999999999999998763      


Q ss_pred             cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                            .+....+|...+..  +++++.+|++++.|+.     |++|
T Consensus       210 ------~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~-----i~iw  243 (293)
T d1p22a2         210 ------CLRVLEGHEELVRC--IRFDNKRIVSGAYDGK-----IKVW  243 (293)
T ss_dssp             ------EEEEECCCSSCEEE--EECCSSEEEEEETTSC-----EEEE
T ss_pred             ------eeeeecccceeeee--ccccceEEEEEcCCCE-----EEEE
Confidence                  66777788888765  4567889999965555     9998

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=1.5e-22  Score=167.66  Aligned_cols=276  Identities=8%  Similarity=-0.021  Sum_probs=186.6

Q ss_pred             EEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------------c-cccccCC
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------------L-PYHMRDD   96 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------------~-~~~~~~~   96 (312)
                      ..||.++++++.++..| ..+..++|+|+      |+++++++.|+.|++||+.+++..            . +....++
T Consensus        45 ~v~D~~t~~v~~~~~~g-~~~~~v~fSpD------G~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~S  117 (432)
T d1qksa2          45 ALIDGSTYEIKTVLDTG-YAVHISRLSAS------GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEG  117 (432)
T ss_dssp             EEEETTTCCEEEEEECS-SCEEEEEECTT------SCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTT
T ss_pred             EEEECCCCcEEEEEeCC-CCeeEEEECCC------CCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccC
Confidence            34999999999999977 46999999999      999999999999999999876531            1 1223457


Q ss_pred             CCCceE-EEEeCCCcEEEEcCCCCcceeeeeeeecc----cCCCccceeEEEECCCCCeEE-EeecCCeEEE-ecccCce
Q psy15191         97 SKQLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGE----VGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL-DVTTWKQ  169 (312)
Q Consensus        97 ~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~-d~~~~~~  169 (312)
                      +++.++ ++++.++.|++||..+.+...........    ...+......+.++|++..++ +...++.+.+ |..+.+.
T Consensus       118 pDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~  197 (432)
T d1qksa2         118 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN  197 (432)
T ss_dssp             CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE
T ss_pred             CCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCc
Confidence            788875 67888999999999986544332221111    112445567889999998765 4556788888 7776654


Q ss_pred             eeeec-ccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCCC--------------------------
Q psy15191        170 IQTLP-CHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDKT--------------------------  221 (312)
Q Consensus       170 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~--------------------------  221 (312)
                      ..... .+...+..++|+|+|+++++++. ++.+.++|..+.+....+......                          
T Consensus       198 ~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~  277 (432)
T d1qksa2         198 LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDD  277 (432)
T ss_dssp             EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSS
T ss_pred             ceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCc
Confidence            43322 35567889999999998877765 467888898875444333221100                          


Q ss_pred             -----------CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc------------------ccccce
Q psy15191        222 -----------NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ------------------NTLWPE  272 (312)
Q Consensus       222 -----------~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------~~~~~~  272 (312)
                                 ...+...+....++|++..+++++.++..++|+............                  .+.|..
T Consensus       278 ~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~  357 (432)
T d1qksa2         278 SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPI  357 (432)
T ss_dssp             EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECH
T ss_pred             eEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccCCceEeccc
Confidence                       001233566677888888888888888888887654322111000                  011110


Q ss_pred             --eEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        273 --VQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       273 --~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                        ...+..|...|.+++|||||++|+.+...+...+|.|+||
T Consensus       358 ~~~~~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~  399 (432)
T d1qksa2         358 AEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVV  399 (432)
T ss_dssp             HHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEE
T ss_pred             ccccccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEE
Confidence              0122356778999999999998877765554567888887

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.91  E-value=9.5e-21  Score=149.03  Aligned_cols=240  Identities=12%  Similarity=0.083  Sum_probs=174.4

Q ss_pred             EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccccc-------ccccCCCCCce-
Q psy15191         31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNYLP-------YHMRDDSKQLH-  101 (312)
Q Consensus        31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~~~-------~~~~~~~~~~~-  101 (312)
                      .||+++++.+.+++.. ..+..++|+|+      |++| ++++.++.|++||+.+++....       ....+.+++.. 
T Consensus        16 v~D~~t~~~~~~i~~g-~~p~~va~spd------G~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~   88 (301)
T d1l0qa2          16 VIDVTSNKVTATIPVG-SNPMGAVISPD------GTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQV   88 (301)
T ss_dssp             EEETTTTEEEEEEECS-SSEEEEEECTT------SSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred             EEECCCCeEEEEEECC-CCceEEEEeCC------CCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccccccccc
Confidence            3899999999999754 56789999999      8876 5777899999999998876322       22233455554 


Q ss_pred             EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecccCCc
Q psy15191        102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQLT  179 (312)
Q Consensus       102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~~~  179 (312)
                      ++++..++.+.+|+..+.+.  .....      +...+.++.++|+++.++... .++.+.+ +..+......+. +...
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  159 (301)
T d1l0qa2          89 YVTNMASSTLSVIDTTSNTV--AGTVK------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-VGRS  159 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEE--EEEEE------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CCSS
T ss_pred             cccccccceeeeccccccee--eeecc------ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc-cCCC
Confidence            45566778899999987432  22222      234567899999999876554 5667777 777777777666 4456


Q ss_pred             eeEEEECCCCCEEEEEecC-CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec---cCCeEEEEec
Q psy15191        180 ITQLAFSPDDTHLVSVSRD-RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGL  255 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~  255 (312)
                      +..+.++|++..+++++.+ +.+.+|+...........        ....+..++++++++.++.+.   .++.|++||+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~  231 (301)
T d1l0qa2         160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--------VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT  231 (301)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred             ceEEEeeccccceeeecccccccccccccceeeeeccc--------ccCCcceeeccccccccccccccceeeeeeeeec
Confidence            8889999999988887765 567777777665555544        445577899999999877654   3468999999


Q ss_pred             CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE-EEEecCCCcccceEEeC
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL-ASACKATKPEHAAIIIW  312 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~s~d~~~~dg~i~iW  312 (312)
                      .++.            .+..+.. ...+.+++|+|||++| +++     +.|+.|++|
T Consensus       232 ~t~~------------~~~~~~~-~~~~~~va~spdg~~l~va~-----~~~~~i~v~  271 (301)
T d1l0qa2         232 GTNK------------ITARIPV-GPDPAGIAVTPDGKKVYVAL-----SFCNTVSVI  271 (301)
T ss_dssp             TTTE------------EEEEEEC-CSSEEEEEECTTSSEEEEEE-----TTTTEEEEE
T ss_pred             CCCe------------EEEEEcC-CCCEEEEEEeCCCCEEEEEE-----CCCCeEEEE
Confidence            8762            3444443 4567999999999977 566     456669987

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.90  E-value=3.2e-22  Score=161.57  Aligned_cols=178  Identities=12%  Similarity=0.000  Sum_probs=138.2

Q ss_pred             CCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC--eEEE-ecccCcee
Q psy15191         95 DDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG--SLHL-DVTTWKQI  170 (312)
Q Consensus        95 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~i~~-d~~~~~~~  170 (312)
                      ++| ++.++++++ .|.|++||+..+...     +    ..|...|.+++|+|||++|++++.+.  .+++ |.++....
T Consensus        10 fSP~dG~~~a~~~-~g~v~v~d~~~~~~~-----~----~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~   79 (360)
T d1k32a3          10 FSPLDGDLIAFVS-RGQAFIQDVSGTYVL-----K----VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE   79 (360)
T ss_dssp             EEECGGGCEEEEE-TTEEEEECTTSSBEE-----E----CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             ccCCCCCEEEEEE-CCeEEEEECCCCcEE-----E----ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE
Confidence            455 566666554 357777777653211     1    14677899999999999998776554  5667 77766555


Q ss_pred             eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-----
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-----  245 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-----  245 (312)
                       .+..|...+..++|+|++++|++++.++.+++|++.+.+....+..       +...+.+++|+|+|++|+.+.     
T Consensus        80 -~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~spdg~~la~~~~~~~~  151 (360)
T d1k32a3          80 -KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS-------REAMITDFTISDNSRFIAYGFPLKHG  151 (360)
T ss_dssp             -ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-------SSSCCCCEEECTTSCEEEEEEEECSS
T ss_pred             -EeeCCCceEEeeeecccccccceeccccccccccccccceeeeeec-------ccccccchhhccceeeeeeecccccc
Confidence             4456999999999999999999999999999999998887777665       666788899999999998643     


Q ss_pred             -----cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        246 -----RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       246 -----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                           .++.+++||+..+             ....+..+...+..++|+|+|++|++++.++.
T Consensus       152 ~~~~~~~~~~~v~d~~~~-------------~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~  201 (360)
T d1k32a3         152 ETDGYVMQAIHVYDMEGR-------------KIFAATTENSHDYAPAFDADSKNLYYLSYRSL  201 (360)
T ss_dssp             TTCSCCEEEEEEEETTTT-------------EEEECSCSSSBEEEEEECTTSCEEEEEESCCC
T ss_pred             ceeeccccceeeeccccC-------------ceeeecccccccccccccCCCCEEEEEeCCCc
Confidence                 3457999999876             45556667788899999999999999976655

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.89  E-value=8.3e-21  Score=151.69  Aligned_cols=222  Identities=11%  Similarity=0.100  Sum_probs=155.3

Q ss_pred             ceEEEecCCCcEEEeeecCCcccc----------cccccCCCCCceE-EEEeCCCcEEEEcCCCCcceeeeeeeecccCC
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNYL----------PYHMRDDSKQLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGEVGG  134 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~~----------~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  134 (312)
                      .++++++.|++|+|||+.+.+...          +....++|++.++ ++++.++.|.+||+.+++.  +..........
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~--~~~~~~~~~~~   79 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET--LGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE--EEEEECCBTTE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcE--EEEEecCCCcc
Confidence            489999999999999999887632          2344557888776 5667899999999998543  33333322222


Q ss_pred             CccceeEEEECCCCCeEEEeec------------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeE
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGF------------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW  201 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~------------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  201 (312)
                      +...+..++|+|++++++++..            +..+.+ |..+.+....+. +...+..++|+|||+++++++.+  +
T Consensus        80 ~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~--~  156 (337)
T d1pbyb_          80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGRD--L  156 (337)
T ss_dssp             EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESSS--E
T ss_pred             cccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcCC--c
Confidence            3445668999999999988764            344555 777777776666 45668899999999999988654  6


Q ss_pred             EEEEccCCCeEEEEeccCCC-----------------------------------------------------------C
Q psy15191        202 GLYKRQSSGRLSLVACSDKT-----------------------------------------------------------N  222 (312)
Q Consensus       202 ~~wd~~~~~~~~~~~~~~~~-----------------------------------------------------------~  222 (312)
                      .+||..+.+....+......                                                           .
T Consensus       157 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (337)
T d1pbyb_         157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV  236 (337)
T ss_dssp             EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred             ceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEe
Confidence            77888775444333221100                                                           0


Q ss_pred             cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      ..+...+..++++|++.+++.+  ++.|++||+.+..            .+..+ .+...+.+++|+|||++|++++.  
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~------------~~~~~-~~~~~~~~~~~s~dG~~l~v~~~--  299 (337)
T d1pbyb_         237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA------------SIKRV-PLPHSYYSVNVSTDGSTVWLGGA--  299 (337)
T ss_dssp             EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE------------EEEEE-ECSSCCCEEEECTTSCEEEEESB--
T ss_pred             cCCCcceEEEEecccceEEEEc--cccEEEEECCCCc------------EEEEE-cCCCCEEEEEECCCCCEEEEEeC--
Confidence            0023345556777788777655  5789999998873            34444 45677899999999999999954  


Q ss_pred             CcccceEEeC
Q psy15191        303 KPEHAAIIIW  312 (312)
Q Consensus       303 ~~~dg~i~iW  312 (312)
                         |+.|+||
T Consensus       300 ---~~~i~v~  306 (337)
T d1pbyb_         300 ---LGDLAAY  306 (337)
T ss_dssp             ---SSEEEEE
T ss_pred             ---CCcEEEE
Confidence               5559987

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.3e-20  Score=155.97  Aligned_cols=239  Identities=13%  Similarity=0.064  Sum_probs=160.5

Q ss_pred             CceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      +.++++.+.||+|+|||+.+++.+       .+....++|+|.++++++.|+.|++||+.+.+.......+  ...+|..
T Consensus        32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~--~~~~~~~  109 (426)
T d1hzua2          32 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARS  109 (426)
T ss_dssp             GEEEEEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEE
T ss_pred             eEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEe--CCCCCcc
Confidence            345688899999999999998763       3344567899999999999999999999987654443333  2234556


Q ss_pred             ceeEEEECCCCCeEEEe-ecCCeEEE-ecccCceeeeecccCCce-----------eEEEECCCCCEEEEEec-CCeEEE
Q psy15191        138 GFYGCKFGPRGDYIIAH-GFQGSLHL-DVTTWKQIQTLPCHQLTI-----------TQLAFSPDDTHLVSVSR-DRRWGL  203 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~~~~~~~~~~~~~~~v-----------~~~~~~~~~~~l~~~~~-d~~i~~  203 (312)
                      .+.+++|+|||++++++ ..++.+.+ |..++.+......|...+           ..+..++++..++.... .+.+.+
T Consensus       110 ~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~  189 (426)
T d1hzua2         110 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL  189 (426)
T ss_dssp             EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             eEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEE
Confidence            67778889999987655 57888988 888888777666444444           44455555554444332 244445


Q ss_pred             EEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCCccc------------------
Q psy15191        204 YKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDL------------------  264 (312)
Q Consensus       204 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~------------------  264 (312)
                      ++.............      +...+..++|+|++++++++. .+..+.+++..........                  
T Consensus       190 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (426)
T d1hzua2         190 VNYKDIDNLTVTSIG------AAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPK  263 (426)
T ss_dssp             EECSSSSSCEEEEEE------CCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETT
T ss_pred             EEeccccceeeEEec------cCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCC
Confidence            544443332222111      556688999999999877765 4556778876654321100                  


Q ss_pred             ------------------------ccccccceeEEeeccCcceeEEEeccCCCeEEEEec---CCCcccceEEeC
Q psy15191        265 ------------------------VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK---ATKPEHAAIIIW  312 (312)
Q Consensus       265 ------------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~---d~~~~dg~i~iW  312 (312)
                                              .....|+....+.+|...+..++|+|++++|++...   ++ ..|++|+||
T Consensus       264 ~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~-~~~~tv~vw  337 (426)
T d1hzua2         264 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDA-RISQSVAVF  337 (426)
T ss_dssp             TEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSH-HHHTCEEEE
T ss_pred             CCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCc-ccCCEEEEE
Confidence                                    001224567788899999999999999999995321   11 345669988

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.5e-18  Score=136.99  Aligned_cols=270  Identities=10%  Similarity=0.124  Sum_probs=170.3

Q ss_pred             EEEEeccCCCceEEEEEeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEE-EecCCCcEEEeeecCCcc-----
Q psy15191         16 VLYTLTNHKSKVMAVKWNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV-SCSLDKTAILWKYVSEGN-----   87 (312)
Q Consensus        16 ~~~~~~~h~~~v~~~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vw~~~~~~~-----   87 (312)
                      .++......+.|.-  |+.+...  .+.....|.+.|..|+|+|+      |++|+ ++..|+.|++|++.....     
T Consensus         5 ~v~v~~~~~~~I~v--~~~~~~~~l~~~~~~~~~~~v~~la~spD------G~~L~v~~~~d~~i~~~~i~~~~~~~~~~   76 (333)
T d1ri6a_           5 TVYIASPESQQIHV--WNLNHEGALTLTQVVDVPGQVQPMVVSPD------KRYLYVGVRPEFRVLAYRIAPDDGALTFA   76 (333)
T ss_dssp             EEEEEEGGGTEEEE--EEECTTSCEEEEEEEECSSCCCCEEECTT------SSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             EEEEECCCCCcEEE--EEEcCCCCeEEEEEEcCCCCEeEEEEeCC------CCEEEEEECCCCeEEEEEEeCCCCcEEEe
Confidence            34444445555543  5543322  22233358899999999999      99885 555689999999976543     


Q ss_pred             ------cccccccCCCCCceEEEEeC-CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-Ce
Q psy15191         88 ------YLPYHMRDDSKQLHLLSCSM-DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-GS  159 (312)
Q Consensus        88 ------~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~  159 (312)
                            ..+..+.+++++.++++++. ++.+.+|+............     ..+...+.++.++|++++++.++.. ..
T Consensus        77 ~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~s~d~~~~~~~~~~~~~  151 (333)
T d1ri6a_          77 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV-----VEGLDGCHSANISPDNRTLWVPALKQDR  151 (333)
T ss_dssp             EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE-----ECCCTTBCCCEECTTSSEEEEEEGGGTE
T ss_pred             eecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccc-----cCCCccceEEEeeecceeeeccccccce
Confidence                  12334556888888888875 66889998776433322222     2455567889999999998887754 45


Q ss_pred             EEE-ecccCceeee------ecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEE----EEeccCCCCcccce
Q psy15191        160 LHL-DVTTWKQIQT------LPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLS----LVACSDKTNGVHKR  227 (312)
Q Consensus       160 i~~-d~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~~  227 (312)
                      +.+ +..+......      ..........++|++++.+++... ..+...+++........    ..... ........
T Consensus       152 i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~  230 (333)
T d1ri6a_         152 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMM-PENFSDTR  230 (333)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECS-CTTCCSCC
T ss_pred             eeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeee-ecCCCccc
Confidence            665 4333221111      113345568899999998877655 55678888865433211    11111 11111344


Q ss_pred             eeEEEEEcCCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191        228 IIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEH  306 (312)
Q Consensus       228 ~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~d  306 (312)
                      ....+++++++++++.. ..++.+.+|++.......         ...........+.+++|+|||++|++++    ..+
T Consensus       231 ~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~p~~~a~spDGk~l~va~----~~~  297 (333)
T d1ri6a_         231 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL---------SKEGFQPTETQPRGFNVDHSGKYLIAAG----QKS  297 (333)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE---------EEEEEEECSSSCCCEEECTTSSEEEEEC----TTT
T ss_pred             cceeEEEecccCceeeecccCCeEEEEEEcCCCCEE---------EEEEEeCCCCCeeEEEEeCCCCEEEEEE----CCC
Confidence            56778999999876654 567899999987654221         2222233456678999999999988775    344


Q ss_pred             ceEEeC
Q psy15191        307 AAIIIW  312 (312)
Q Consensus       307 g~i~iW  312 (312)
                      +.|++|
T Consensus       298 ~~v~v~  303 (333)
T d1ri6a_         298 HHISVY  303 (333)
T ss_dssp             CEEEEE
T ss_pred             CeEEEE
Confidence            558876

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.86  E-value=5.4e-19  Score=140.98  Aligned_cols=203  Identities=8%  Similarity=0.001  Sum_probs=147.9

Q ss_pred             EeCCCCceEEEEccc--cCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCcccc-------------cccccC
Q psy15191         32 WNGEGGKVLYTLTNH--KSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNYL-------------PYHMRD   95 (312)
Q Consensus        32 w~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~~-------------~~~~~~   95 (312)
                      ||..+++.+.++..+  ...+.+++|+|+      |+++ ++++.++.|.+||+.+++...             .....+
T Consensus        16 ~D~~s~~~~~~i~~~~~~~~~~~i~~spD------g~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~   89 (337)
T d1pbyb_          16 IDTEKMAVDKVITIADAGPTPMVPMVAPG------GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL   89 (337)
T ss_dssp             EETTTTEEEEEEECTTCTTCCCCEEECTT------SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE
T ss_pred             EECCCCeEEEEEECCCCCCCccEEEECCC------CCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEE
Confidence            899999999998753  456889999999      8876 577889999999999887632             223345


Q ss_pred             CCCCceEEEEeC------------CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEe
Q psy15191         96 DSKQLHLLSCSM------------DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLD  163 (312)
Q Consensus        96 ~~~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d  163 (312)
                      ++++..++++..            +..+.+||..+.+  ......      ....+..++|+|+++++++++.+..+ +|
T Consensus        90 s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~-~d  160 (337)
T d1pbyb_          90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFE------APRQITMLAWARDGSKLYGLGRDLHV-MD  160 (337)
T ss_dssp             CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEE------CCSSCCCEEECTTSSCEEEESSSEEE-EE
T ss_pred             cCCCcEEEEeecCCcceeeeccccccceeeccccCCe--EEEecc------ccCCceEEEEcCCCCEEEEEcCCcce-ee
Confidence            677777777663            5678888888743  222222      23447789999999999988765432 24


Q ss_pred             cccCceeeee------------------------------------------------------------------cccC
Q psy15191        164 VTTWKQIQTL------------------------------------------------------------------PCHQ  177 (312)
Q Consensus       164 ~~~~~~~~~~------------------------------------------------------------------~~~~  177 (312)
                      ..+++....+                                                                  ..+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T d1pbyb_         161 PEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD  240 (337)
T ss_dssp             TTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS
T ss_pred             eecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCC
Confidence            3333222111                                                                  0233


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      ..+..+.++|++.+++.+  ++.|++||+.+.+.+..+.        +...+.+++|+|||++|++++.|+.|++||..+
T Consensus       241 ~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~--------~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t  310 (337)
T d1pbyb_         241 VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--------LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET  310 (337)
T ss_dssp             SCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE--------CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred             cceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc--------CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence            445567788888877655  5899999999988887766        455678999999999999999999999999988


Q ss_pred             CC
Q psy15191        258 PP  259 (312)
Q Consensus       258 ~~  259 (312)
                      ..
T Consensus       311 ~~  312 (337)
T d1pbyb_         311 LE  312 (337)
T ss_dssp             CC
T ss_pred             Cc
Confidence            63

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.84  E-value=1.1e-17  Score=131.13  Aligned_cols=203  Identities=15%  Similarity=0.097  Sum_probs=147.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCce-EEEecCCCcEEEeeecCCccc-------ccccccCCCCCceE-
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD-LVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHL-  102 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l-  102 (312)
                      ||..+++.+.++..|. .+..+.|+++      +.. ++++..++.+.+|+..+++..       ......+.+++..+ 
T Consensus        59 ~d~~t~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~  131 (301)
T d1l0qa2          59 IDTATNNVIATVPAGS-SPQGVAVSPD------GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLY  131 (301)
T ss_dssp             EETTTTEEEEEEECSS-SEEEEEECTT------SSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE
T ss_pred             EECCCCceeeeeeccc-cccccccccc------cccccccccccceeeecccccceeeeeccccccceEEEeecCCCeee
Confidence            6666677777887665 4688899888      664 556677889999999887652       22333446666655 


Q ss_pred             EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-CeEEE-ecccCceeeeecccCCce
Q psy15191        103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-GSLHL-DVTTWKQIQTLPCHQLTI  180 (312)
Q Consensus       103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~-d~~~~~~~~~~~~~~~~v  180 (312)
                      +++..++.+.+|+..+...  .....      ....+..++++|++..++++..+ +.+.+ +........... ....+
T Consensus       132 ~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  202 (301)
T d1l0qa2         132 VTNNGDKTVSVINTVTKAV--INTVS------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAP  202 (301)
T ss_dssp             EEETTTTEEEEEETTTTEE--EEEEE------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEE
T ss_pred             eeeccccceeeeeccccce--eeecc------cCCCceEEEeeccccceeeecccccccccccccceeeeeccc-ccCCc
Confidence            5566778899999987442  22222      23447889999999988887765 44555 555555555544 45667


Q ss_pred             eEEEECCCCCEEEEEec---CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecC
Q psy15191        181 TQLAFSPDDTHLVSVSR---DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLG  256 (312)
Q Consensus       181 ~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~  256 (312)
                      ..++++++++.++.+..   ++.|++||+.+.+....+.        ....+.+++|+|||++| ++++.|+.|++||+.
T Consensus       203 ~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~--------~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~  274 (301)
T d1l0qa2         203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP--------VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTA  274 (301)
T ss_dssp             EEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE--------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             ceeeccccccccccccccceeeeeeeeecCCCeEEEEEc--------CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECC
Confidence            88999999998876654   4689999999888776665        33457899999999976 677889999999998


Q ss_pred             CC
Q psy15191        257 EP  258 (312)
Q Consensus       257 ~~  258 (312)
                      ++
T Consensus       275 t~  276 (301)
T d1l0qa2         275 TN  276 (301)
T ss_dssp             TT
T ss_pred             CC
Confidence            87

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.84  E-value=1.4e-19  Score=149.60  Aligned_cols=185  Identities=12%  Similarity=-0.033  Sum_probs=138.8

Q ss_pred             ceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG  138 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  138 (312)
                      -++++.+.||+|.|||..+++..       .+....++|++.++++++.|+.+++||+.+.+.......+  ...++...
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~--~~~~~~~~  110 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK--IGSEARSI  110 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE--CCSEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEe--cCCCCCCe
Confidence            34689999999999999998873       3444567899999999999999999999886654433333  22244555


Q ss_pred             eeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeec-----------ccCCceeEEEECCCCCEEE-EEecCCeEEEE
Q psy15191        139 FYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLP-----------CHQLTITQLAFSPDDTHLV-SVSRDRRWGLY  204 (312)
Q Consensus       139 v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~w  204 (312)
                      +.+..|+|||++| +++..++.+++ |..+.++...+.           .+......+.++|++..++ +...++.|.+|
T Consensus       111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~  190 (432)
T d1qksa2         111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV  190 (432)
T ss_dssp             EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEE
Confidence            6667788999986 56778999999 888887776654           2445567789999998764 55667999999


Q ss_pred             EccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCC
Q psy15191        205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEP  258 (312)
Q Consensus       205 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~  258 (312)
                      |..+.+........      +...+..++|+|+|+++++++ .++.+.++|....
T Consensus       191 d~~~~~~~~~~~i~------~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~  239 (432)
T d1qksa2         191 DYTDLNNLKTTEIS------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG  239 (432)
T ss_dssp             ETTCSSEEEEEEEE------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred             EccCCCcceEEEEc------ccCccccceECCCCCEEEEeccccceEEEeecccc
Confidence            99887765544432      445678899999999877666 4558888887654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.83  E-value=1.2e-18  Score=139.53  Aligned_cols=259  Identities=10%  Similarity=-0.023  Sum_probs=166.4

Q ss_pred             CCCCeEEEEeccCCCceEEEEEeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccc
Q psy15191         11 GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNY   88 (312)
Q Consensus        11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~   88 (312)
                      ..+++++.+... .+.|  ..||..+++++.+++ .|...+.+++|+|+      |+++ ++++.++.|.+||+.+++..
T Consensus         5 ~~~~~~l~~~~~-~~~v--~v~D~~t~~~~~t~~~~~~~~p~~l~~spD------G~~l~v~~~~~~~v~~~d~~t~~~~   75 (346)
T d1jmxb_           5 KAGHEYMIVTNY-PNNL--HVVDVASDTVYKSCVMPDKFGPGTAMMAPD------NRTAYVLNNHYGDIYGIDLDTCKNT   75 (346)
T ss_dssp             CTTCEEEEEEET-TTEE--EEEETTTTEEEEEEECSSCCSSCEEEECTT------SSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CCCCcEEEEEcC-CCEE--EEEECCCCCEEEEEEcCCCCCcceEEECCC------CCEEEEEECCCCcEEEEeCccCeee
Confidence            345677766543 3333  239999999999987 45667889999999      8876 66678999999999887652


Q ss_pred             --------------ccccccCCCCCceEEEEe------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191         89 --------------LPYHMRDDSKQLHLLSCS------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC  142 (312)
Q Consensus        89 --------------~~~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~  142 (312)
                                    .+....+++++.++++++            .++.+.+|+..+.+...  .....   .....+..+
T Consensus        76 ~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~---~~~~~~~~~  150 (346)
T d1jmxb_          76 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK--PVRTF---PMPRQVYLM  150 (346)
T ss_dssp             EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC--CSEEE---ECCSSCCCE
T ss_pred             eeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeee--EEEee---eccCceEEE
Confidence                          123344567777776665            36677788776633221  11110   112234556


Q ss_pred             EECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC--------------------------EEEEE
Q psy15191        143 KFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT--------------------------HLVSV  195 (312)
Q Consensus       143 ~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------------------~l~~~  195 (312)
                      .+++++..++.+   +.+.+ +..+.+....+..+ .....+.++|++.                          .++++
T Consensus       151 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (346)
T d1jmxb_         151 RAADDGSLYVAG---PDIYKMDVKTGKYTVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA  226 (346)
T ss_dssp             EECTTSCEEEES---SSEEEECTTTCCEEEEECST-TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred             EecCCCEEEEeC---CcceEEEccCCCEEEEEecC-CCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeec
Confidence            677777666543   23444 66555555554422 2233333444333                          23344


Q ss_pred             ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE
Q psy15191        196 SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK  275 (312)
Q Consensus       196 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  275 (312)
                      ..+..+.+||+.+..........      +...+..+.+++++.+++.... +.|.+||+.++.            .+..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~------------~~~~  287 (346)
T d1jmxb_         227 DLLYGYLSVDLKTGKTHTQEFAD------LTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRK------------LIKA  287 (346)
T ss_dssp             EEEEEEEEEETTTCCEEEEEEEE------CSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTE------------EEEE
T ss_pred             cCCceEEEEECCCCceEEEEeec------ccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCc------------EEEE
Confidence            45566788888776655443332      5666888999999988887664 579999998762            3444


Q ss_pred             eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        276 LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      + .+...+.+++|+|||++|++++.     |+.|+||
T Consensus       288 ~-~~~~~~~~va~s~DG~~l~v~~~-----d~~v~v~  318 (346)
T d1jmxb_         288 A-NLDHTYYCVAFDKKGDKLYLGGT-----FNDLAVF  318 (346)
T ss_dssp             E-ECSSCCCEEEECSSSSCEEEESB-----SSEEEEE
T ss_pred             E-cCCCCEEEEEEcCCCCEEEEEeC-----CCcEEEE
Confidence            4 34567999999999999999954     5559998

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.78  E-value=4.9e-17  Score=130.67  Aligned_cols=270  Identities=15%  Similarity=0.034  Sum_probs=166.2

Q ss_pred             CCCCeEEEEecc-C-CCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEe----------cCCCcEE
Q psy15191         11 GEGGKVLYTLTN-H-KSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSC----------SLDKTAI   78 (312)
Q Consensus        11 ~~~~~~~~~~~~-h-~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~----------~~dg~i~   78 (312)
                      ..+|+.++.... + ...-.-..||..+++++.++..+..+  .++|+|+      |++|+..          ..|+.|+
T Consensus        10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpD------g~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_          10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADD------GSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTT------SSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCC------CCEEEEEeCCCccccccCCCCEEE
Confidence            456777765432 2 12222345899999999999876544  7899999      8888754          4578999


Q ss_pred             EeeecCCcccc---------------cccccCCCCCceEEEEe--CCCcEEEEcCCCCcceeeeeeeecc--cCCCccce
Q psy15191         79 LWKYVSEGNYL---------------PYHMRDDSKQLHLLSCS--MDKSIIVWAPDPTTGLWLETARVGE--VGGNTLGF  139 (312)
Q Consensus        79 vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~v  139 (312)
                      +||..+++...               .....+++++..++.+.  .+..+.+|+..+.+..  .......  ........
T Consensus        82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  159 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK--RMLDVPDCYHIFPTAPD  159 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE--EEEECCSEEEEEEEETT
T ss_pred             EEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEe--eEEecCCcceEeecCCc
Confidence            99998877532               12233566777766654  4567889999875432  2222100  00011223


Q ss_pred             eEEEECCCCCeEEEeec-CCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191        140 YGCKFGPRGDYIIAHGF-QGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS  218 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~-~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  218 (312)
                      ..+.++++++.++.... ++.+.+    .+.......+...+....+.+++..++.++.++.+++|++............
T Consensus       160 ~~~~~~~dg~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  235 (355)
T d2bbkh_         160 TFFMHCRDGSLAKVAFGTEGTPEI----THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE  235 (355)
T ss_dssp             EEEEEETTSCEEEEECCSSSCCEE----EECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE
T ss_pred             ceEEEcCCCCEEEEEecCCCeEEE----EecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccC
Confidence            45677777777665433 333333    1111112234455666778888888999999999999999876543221111


Q ss_pred             CCCC-----cccceeeEEEEEcCCCceEEEeccC----------CeEEEEecCCCCCCcccccccccceeEEeeccCcce
Q psy15191        219 DKTN-----GVHKRIIWGVAWSHDSRYFLTISRD----------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEI  283 (312)
Q Consensus       219 ~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  283 (312)
                      ....     .........++++|++..++....+          +.|.+||..++.            .+..+. +...+
T Consensus       236 ~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~------------~~~~~~-~~~~~  302 (355)
T d2bbkh_         236 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE------------RLAKFE-MGHEI  302 (355)
T ss_dssp             SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC------------EEEEEE-EEEEE
T ss_pred             CcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCc------------EEEEec-CCCCE
Confidence            0000     0011223458899999988766543          379999988773            344444 34568


Q ss_pred             eEEEeccCCC--eEEEEecCCCcccceEEeC
Q psy15191        284 YSLAASHDGT--LLASACKATKPEHAAIIIW  312 (312)
Q Consensus       284 ~~~~~s~~~~--~l~s~s~d~~~~dg~i~iW  312 (312)
                      .+++|+|||+  +++++     ..|+.|++|
T Consensus       303 ~~~a~spDG~~~l~v~~-----~~d~~i~v~  328 (355)
T d2bbkh_         303 DSINVSQDEKPLLYALS-----TGDKTLYIH  328 (355)
T ss_dssp             CEEEECCSSSCEEEEEE-----TTTTEEEEE
T ss_pred             EEEEEcCCCCeEEEEEE-----CCCCEEEEE
Confidence            8999999998  34566     445669987

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.77  E-value=2.7e-15  Score=121.23  Aligned_cols=264  Identities=11%  Similarity=0.014  Sum_probs=159.3

Q ss_pred             CCCCeEEEEec-cC-CCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEE
Q psy15191         11 GEGGKVLYTLT-NH-KSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAI   78 (312)
Q Consensus        11 ~~~~~~~~~~~-~h-~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~   78 (312)
                      ..+|+.++... .| .....-..||..+++.+.++..+..+  .++|+|+      |++|++++          .++.|.
T Consensus        29 spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpD------G~~l~va~~~~~~~~~~~~~~~v~  100 (373)
T d2madh_          29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHS------GSEFALASTSFSRIAKGKRTDYVE  100 (373)
T ss_pred             CCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCC------CCEEEEEeecCCcccccccceEEE
Confidence            45566665543 23 23333345899999999999877544  7899999      99988764          467899


Q ss_pred             EeeecCCcccccccc---------------cCCCCCceEEEE--eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191         79 LWKYVSEGNYLPYHM---------------RDDSKQLHLLSC--SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG  141 (312)
Q Consensus        79 vw~~~~~~~~~~~~~---------------~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~  141 (312)
                      +||..+++.......               .+.+++..++..  ..++.+.+|+....+.           ..+.....+
T Consensus       101 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  169 (373)
T d2madh_         101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD-----------DQLLSSPTC  169 (373)
T ss_pred             EEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeE-----------EEEecccee
Confidence            999998876322111               112233322222  2334455555544221           122234567


Q ss_pred             EEECCCCCeE-EEeecCCeEEE-ecccCceeeeec------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191        142 CKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLP------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS  213 (312)
Q Consensus       142 ~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  213 (312)
                      +.++|+++.+ ++.+.|+.+.+ +...........      ........+.+++++. ++..+.++.+.+|+........
T Consensus       170 ~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~  248 (373)
T d2madh_         170 YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATN  248 (373)
T ss_pred             EEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEEE
Confidence            8899998765 57788899888 665555544433      1222334556666664 4456678999999988765433


Q ss_pred             EEeccCCCCc-----ccceeeEEEEEcCCCceE----------EEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191        214 LVACSDKTNG-----VHKRIIWGVAWSHDSRYF----------LTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG  278 (312)
Q Consensus       214 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l----------~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  278 (312)
                      ..........     ........++++|++..+          ++...++.+.+||+.++.            .+..+ .
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~------------~~~~~-~  315 (373)
T d2madh_         249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ------------TSSQI-S  315 (373)
T ss_pred             EEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCc------------EEEEe-c
Confidence            3322111100     011223345666666544          445566789999988873            34433 3


Q ss_pred             cCcceeEEEeccCCCe--EEEEecCCCcccceEEeC
Q psy15191        279 HGYEIYSLAASHDGTL--LASACKATKPEHAAIIIW  312 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~--l~s~s~d~~~~dg~i~iW  312 (312)
                      +...+.+++|+|||+.  ++++     +.|+.|+||
T Consensus       316 ~~~~~~~~a~spDG~~~l~vt~-----~~d~~v~v~  346 (373)
T d2madh_         316 LGHDVDAISVAQDGGPDLYALS-----AGTEVLHIY  346 (373)
T ss_pred             CCCCeeEEEECCCCCEEEEEEe-----CCCCeEEEE
Confidence            5677899999999984  4677     455559998

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.73  E-value=1e-15  Score=122.17  Aligned_cols=228  Identities=11%  Similarity=-0.029  Sum_probs=139.0

Q ss_pred             eEeCCCCeEEEEec-cCCCceEEEEEeCCC--------------------CceEEEEcccc------CcEEEEEEecCcC
Q psy15191          8 VVNGEGGKVLYTLT-NHKSKVMAVKWNGEG--------------------GKVLYTLTNHK------SKVMAVKWVLNTS   60 (312)
Q Consensus         8 v~~~~~~~~~~~~~-~h~~~v~~~~w~~~~--------------------~~~~~~~~~h~------~~v~~~~~~~~~~   60 (312)
                      ||+..+++.+.++. .|...+..++|++++                    ++.+..+....      ..+..++|+|+  
T Consensus        22 v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~D--   99 (346)
T d1jmxb_          22 VVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD--   99 (346)
T ss_dssp             EEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT--
T ss_pred             EEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecC--
Confidence            67777777777765 344455566655543                    44444443221      12345667666  


Q ss_pred             cCCCCceEEEec------------CCCcEEEeeecCCcccccccccCCCCCceEEEEeCC-------CcEEEEcCCCCcc
Q psy15191         61 LDPEHKDLVSCS------------LDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMD-------KSIIVWAPDPTTG  121 (312)
Q Consensus        61 ~~~~~~~l~s~~------------~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~  121 (312)
                          |++++.++            .++.+.+|+..++...........+....++..+.+       +.+.+|++.+.+.
T Consensus       100 ----G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (346)
T d1jmxb_         100 ----GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKY  175 (346)
T ss_dssp             ----SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCE
T ss_pred             ----CCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEccCCCE
Confidence                88887665            467789999888765433222222222222222222       4467787776432


Q ss_pred             eeeeeeeecccCCCccceeEEEECCCCCe--------------------------EEEeecCCeEEE-ecccCceeee-e
Q psy15191        122 LWLETARVGEVGGNTLGFYGCKFGPRGDY--------------------------IIAHGFQGSLHL-DVTTWKQIQT-L  173 (312)
Q Consensus       122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------------------l~~~~~~~~i~~-d~~~~~~~~~-~  173 (312)
                        ......      ......+.++|++..                          +.++..+..+.+ +..+...... .
T Consensus       176 --~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (346)
T d1jmxb_         176 --TVALPL------RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF  247 (346)
T ss_dssp             --EEEECS------TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred             --EEEEec------CCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEe
Confidence              222221      111222333444333                          222333344444 5555544333 3


Q ss_pred             cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191        174 PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW  253 (312)
Q Consensus       174 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw  253 (312)
                      ..+...+..+.+++++.+++... ++.|.+||..+.+.+..+.        +...+.+++|+|||++|++++.|+.|++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~--------~~~~~~~va~s~DG~~l~v~~~d~~v~v~  318 (346)
T d1jmxb_         248 ADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN--------LDHTYYCVAFDKKGDKLYLGGTFNDLAVF  318 (346)
T ss_dssp             EECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE--------CSSCCCEEEECSSSSCEEEESBSSEEEEE
T ss_pred             ecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc--------CCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence            35777888999999888887765 4679999999888777665        44458899999999999999999999999


Q ss_pred             ecCCC
Q psy15191        254 GLGEP  258 (312)
Q Consensus       254 d~~~~  258 (312)
                      |+.+.
T Consensus       319 D~~t~  323 (346)
T d1jmxb_         319 NPDTL  323 (346)
T ss_dssp             ETTTT
T ss_pred             ECccC
Confidence            99886

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.71  E-value=1.1e-14  Score=116.65  Aligned_cols=257  Identities=11%  Similarity=0.053  Sum_probs=160.9

Q ss_pred             ceEeCCCCeEEEEeccCCCceEEEEEeCCC-----------------------------CceEEEEccccC-------cE
Q psy15191          7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-----------------------------GKVLYTLTNHKS-------KV   50 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-----------------------------~~~~~~~~~h~~-------~v   50 (312)
                      .+|+..+++.+.++..+...  .++|++++                             ++.+..+..+..       ..
T Consensus        31 ~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~  108 (355)
T d2bbkh_          31 FVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP  108 (355)
T ss_dssp             EEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred             EEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCC
Confidence            36788888888887755443  35555554                             444444332221       12


Q ss_pred             EEEEEecCcCcCCCCceEEEe--cCCCcEEEeeecCCcccccccccC-----CCCCceEEEEeCCCcEEEEcCCCCccee
Q psy15191         51 MAVKWVLNTSLDPEHKDLVSC--SLDKTAILWKYVSEGNYLPYHMRD-----DSKQLHLLSCSMDKSIIVWAPDPTTGLW  123 (312)
Q Consensus        51 ~~~~~~~~~~~~~~~~~l~s~--~~dg~i~vw~~~~~~~~~~~~~~~-----~~~~~~l~~~~~d~~i~i~d~~~~~~~~  123 (312)
                      ..++|+|+      +++++.+  +.+..+.+|+..+++.......+.     .......++.+.|+....+.........
T Consensus       109 ~~~~~s~d------g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~  182 (355)
T d2bbkh_         109 WMTSLTPD------GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE  182 (355)
T ss_dssp             GGEEECTT------SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred             ceEEEecC------CCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEE
Confidence            34567776      8877665  456789999998877643222111     1112245566677776666554432222


Q ss_pred             eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee--eec----------ccCCceeEEEECCCCC
Q psy15191        124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ--TLP----------CHQLTITQLAFSPDDT  190 (312)
Q Consensus       124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~--~~~----------~~~~~v~~~~~~~~~~  190 (312)
                      ...... ....+...+....+.+++..++.++.++.+++ +....+...  ...          ........+++++++.
T Consensus       183 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~  261 (355)
T d2bbkh_         183 ITHTEV-FHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD  261 (355)
T ss_dssp             EEECCC-CSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred             EEeccc-ccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCC
Confidence            111111 11233344556678888888888899999988 555443221  111          1122345688999999


Q ss_pred             EEEEEecC----------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc--eEEEeccCCeEEEEecCCC
Q psy15191        191 HLVSVSRD----------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR--YFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       191 ~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~  258 (312)
                      .++....+          ..|.+||..+.+.+..+.        +...+.+++|+|||+  ++++++.|+.|++||+.++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~--------~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg  333 (355)
T d2bbkh_         262 RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--------MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG  333 (355)
T ss_dssp             EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--------EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred             eEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec--------CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCC
Confidence            88776544          369999999988887766        455688999999998  4567788999999999987


Q ss_pred             CCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191        259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG  292 (312)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  292 (312)
                      .            .+..+.++......+.+.++|
T Consensus       334 ~------------~~~~i~~~G~~p~~i~~~d~~  355 (355)
T d2bbkh_         334 E------------ELRSVNQLGHGPQVITTADMG  355 (355)
T ss_dssp             C------------EEEEECCCCSSCCEEECCCCC
T ss_pred             C------------EEEEEeCcCCCccEEEeCCCC
Confidence            4            677777776666666665543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.70  E-value=9e-14  Score=112.13  Aligned_cols=232  Identities=8%  Similarity=-0.034  Sum_probs=141.0

Q ss_pred             EeCCCCceEEEEccccCcEE-------EEEEecCcCcCCCCceEEEe--cCCCcEEEeeecCCcccc----cccccCCCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVM-------AVKWVLNTSLDPEHKDLVSC--SLDKTAILWKYVSEGNYL----PYHMRDDSK   98 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~-------~~~~~~~~~~~~~~~~l~s~--~~dg~i~vw~~~~~~~~~----~~~~~~~~~   98 (312)
                      |+..+++++..+..+.....       .+.|+++      ++.++..  ..++.+.+|+....+...    .......++
T Consensus       102 ~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  175 (373)
T d2madh_         102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN------NADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPG  175 (373)
T ss_pred             EECCCCcEEEEEecCCcceeEeccCCCcEEEEeC------CCcEEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecC
Confidence            55555555555555544433       3556666      6665444  445678889887765421    112223344


Q ss_pred             Cc-eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee--ec
Q psy15191         99 QL-HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT--LP  174 (312)
Q Consensus        99 ~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~--~~  174 (312)
                      +. .+++.+.|+.+.+|+....+......... ...........+.+.+++..+ ..+.++.+.+ +..+......  ..
T Consensus       176 g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~  253 (373)
T d2madh_         176 APSTFYLLCAQGGLAKTDHAGGAAGAGLVGAM-LTAAQNLLTQPAQANKSGRIV-WPVYSGKILQADISAAGATNKAPID  253 (373)
T ss_pred             CCcEEEEEcCCCeEEEEEcCCceeeEEEeeec-cccCccceeeeEEECCCceEE-EecCCceEEEEEcCCCeEEEEEeec
Confidence            43 56788999999999988754332222111 111222223445556665544 4445565555 4433322111  11


Q ss_pred             ----------ccCCceeEEEECCCCCEE----------EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191        175 ----------CHQLTITQLAFSPDDTHL----------VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW  234 (312)
Q Consensus       175 ----------~~~~~v~~~~~~~~~~~l----------~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  234 (312)
                                ........+++++++..+          ++...++.+.+||..+.+.+..+.        +...+..++|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~--------~~~~~~~~a~  325 (373)
T d2madh_         254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--------LGHDVDAISV  325 (373)
T ss_pred             cccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec--------CCCCeeEEEE
Confidence                      111223445566665544          445566789999999988887765        5566889999


Q ss_pred             cCCCce--EEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        235 SHDSRY--FLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       235 ~~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      +|||+.  +++++.|+.|++||+.++.            .+..+.++....+.+++.++
T Consensus       326 spDG~~~l~vt~~~d~~v~v~D~~tg~------------~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         326 AQDGGPDLYALSAGTEVLHIYDAGAGD------------QDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             CCCCCEEEEEEeCCCCeEEEEECCCCC------------EEEEECCCCCCCcEEEEecC
Confidence            999984  4688999999999999884            67888888887888887654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=6.5e-14  Score=110.99  Aligned_cols=221  Identities=14%  Similarity=0.158  Sum_probs=143.0

Q ss_pred             ceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecccCC
Q psy15191         66 KDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEVGG  134 (312)
Q Consensus        66 ~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~  134 (312)
                      ..+++++.|++|++|++.....          -.+..+.++|++.+|++++ .|+.|.+|++............    ..
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~----~~   80 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE----SA   80 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE----EE
T ss_pred             EEEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeee----cc
Confidence            3568888999999999976432          1345556789998885554 5899999998865433222211    12


Q ss_pred             CccceeEEEECCCCCeEEEeec-CCeEEE-ecccCceee--eecccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCC
Q psy15191        135 NTLGFYGCKFGPRGDYIIAHGF-QGSLHL-DVTTWKQIQ--TLPCHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSS  209 (312)
Q Consensus       135 ~~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~  209 (312)
                      ....+..++|+|+|++|++++. ++.+.+ +........  ....+...+.++.++|++++++.++. +..|.+|+....
T Consensus        81 ~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~  160 (333)
T d1ri6a_          81 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD  160 (333)
T ss_dssp             CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccC
Confidence            3344678999999999998875 567776 333222222  22356677889999999998888764 467999998876


Q ss_pred             CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEee------ccCcc
Q psy15191        210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY------GHGYE  282 (312)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  282 (312)
                      ............. ........++|++++.+++... ..+...+|++........        ....+.      .....
T Consensus       161 ~~~~~~~~~~~~~-~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  231 (333)
T d1ri6a_         161 GHLVAQDPAEVTT-VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE--------CVQTLDMMPENFSDTRW  231 (333)
T ss_dssp             SCEEEEEEEEEEC-STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE--------EEEEEECSCTTCCSCCC
T ss_pred             Ccceeeeceeeee-ecCCCccEEEEeccceeEEeeccccCceEEEeeccccccee--------eeeeeeeeecCCCcccc
Confidence            5443332211111 1344567899999998876554 566788888765432211        111111      12345


Q ss_pred             eeEEEeccCCCeEEEEe
Q psy15191        283 IYSLAASHDGTLLASAC  299 (312)
Q Consensus       283 v~~~~~s~~~~~l~s~s  299 (312)
                      ...++++++++++....
T Consensus       232 ~~~~~~s~d~~~~~~~~  248 (333)
T d1ri6a_         232 AADIHITPDGRHLYACD  248 (333)
T ss_dssp             EEEEEECTTSSEEEEEE
T ss_pred             ceeEEEecccCceeeec
Confidence            66788999998777665

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.61  E-value=5.3e-14  Score=113.50  Aligned_cols=260  Identities=7%  Similarity=-0.122  Sum_probs=153.0

Q ss_pred             cCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEe----------cCCCcEEEeeecCCcccc--
Q psy15191         22 NHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSC----------SLDKTAILWKYVSEGNYL--   89 (312)
Q Consensus        22 ~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~----------~~dg~i~vw~~~~~~~~~--   89 (312)
                      .+.+...-..|+..+++.+.++.++...  .++|+|+      |+.|+..          +.|+.|.+||..+++...  
T Consensus        41 ~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spD------g~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i  112 (368)
T d1mdah_          41 YFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHS------GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI  112 (368)
T ss_dssp             TTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTT------SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred             cCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCC------CCEEEEEcccCccccccccCCeEEEEECCCCcEeeee
Confidence            3444444445799999999999877655  5889998      8888764          457889999998877521  


Q ss_pred             -------------cccccCCCCCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee
Q psy15191         90 -------------PYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG  155 (312)
Q Consensus        90 -------------~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  155 (312)
                                   .....+++++.+++++. .++.+.+||+.+.+..............+......+.++++++.++...
T Consensus       113 ~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~  192 (368)
T d1mdah_         113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDL  192 (368)
T ss_dssp             EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEEC
T ss_pred             cCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEe
Confidence                         12234678888887775 5799999999985433222111000001112223344555555544443


Q ss_pred             cCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-----cceeeE
Q psy15191        156 FQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-----HKRIIW  230 (312)
Q Consensus       156 ~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-----~~~~v~  230 (312)
                      .++.....   .........+...+....+.+++..+.+  .++.+++++...................     ......
T Consensus       193 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  267 (368)
T d1mdah_         193 AAAPAAAG---IVGAQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ  267 (368)
T ss_dssp             CSSCCCCE---ECCCCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred             cCCceeee---eeecccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCce
Confidence            33322210   0111122234555667788888766554  4566777887765544332221111000     112233


Q ss_pred             EEEEcCCCceEEEeccC---------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe--EEEEe
Q psy15191        231 GVAWSHDSRYFLTISRD---------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL--LASAC  299 (312)
Q Consensus       231 ~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~s~s  299 (312)
                      .++++|++..++....+         ..|.+||..++.            .+..+. +...+.+++|+|||+.  ++++ 
T Consensus       268 ~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~------------~~~~~~-~~~~~~~~a~spDG~~~ly~s~-  333 (368)
T d1mdah_         268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ------------TSGPIS-NGHDSDAIIAAQDGASDNYANS-  333 (368)
T ss_dssp             CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC------------EEECCE-EEEEECEEEECCSSSCEEEEEE-
T ss_pred             eEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc------------EeEEec-CCCceeEEEECCCCCEEEEEEe-
Confidence            57889988876654322         268899988774            344443 3467889999999973  4555 


Q ss_pred             cCCCcccceEEeC
Q psy15191        300 KATKPEHAAIIIW  312 (312)
Q Consensus       300 ~d~~~~dg~i~iW  312 (312)
                          ..|+.|++|
T Consensus       334 ----~~~~~v~v~  342 (368)
T d1mdah_         334 ----AGTEVLDIY  342 (368)
T ss_dssp             ----TTTTEEEEE
T ss_pred             ----CCCCeEEEE
Confidence                455669987

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.57  E-value=8.2e-13  Score=106.40  Aligned_cols=211  Identities=6%  Similarity=-0.062  Sum_probs=130.7

Q ss_pred             EeCCCCceEEEEccccC-------cEEEEEEecCcCcCCCCceEEEec-CCCcEEEeeecCCcccccccccC-----CCC
Q psy15191         32 WNGEGGKVLYTLTNHKS-------KVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKYVSEGNYLPYHMRD-----DSK   98 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~-----~~~   98 (312)
                      ||+.+++++..+..+..       ....++|+|+      |++|+.+. .++.+.+||+.+++.......+.     ...
T Consensus       101 ~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpD------Gk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~  174 (368)
T d1mdah_         101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS------SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGA  174 (368)
T ss_dssp             ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT------SSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEE
T ss_pred             EECCCCcEeeeecCCccceecccCCccceEECCC------CCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCC
Confidence            66666666666654332       1235778888      98887765 57999999999987643322221     122


Q ss_pred             CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee--ec-
Q psy15191         99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT--LP-  174 (312)
Q Consensus        99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~--~~-  174 (312)
                      ...++..+.||.+.+++............ ......+...+....+.+++..+...+  +.+.+ +.........  .. 
T Consensus       175 ~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~v~~~~~~~~~~~~~~~~~~  251 (368)
T d1mdah_         175 AATHYLGSCPASLAASDLAAAPAAAGIVG-AQCTGAQNCSSQAAQANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDG  251 (368)
T ss_dssp             TTEEECCCCTTSCEEEECCSSCCCCEECC-CCSCTTSCBCSCCEEETTTTEEEECBS--SCCEEEECCSSCCEEECCCCS
T ss_pred             CceEEEEcCCCCEEEEEecCCceeeeeee-cccccccccceeecccccCcEEEEecC--CCEEEEeecCCceEEEeeccc
Confidence            33677788899999998876433222111 112223444455667777776555433  33333 2222221111  00 


Q ss_pred             ---------ccCCceeEEEECCCCCEEEEEecC---------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC
Q psy15191        175 ---------CHQLTITQLAFSPDDTHLVSVSRD---------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH  236 (312)
Q Consensus       175 ---------~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  236 (312)
                               ........++++|++..++....+         ..|.+||..+.+.+..+.        ....+.+++|+|
T Consensus       252 ~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~--------~~~~~~~~a~sp  323 (368)
T d1mdah_         252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS--------NGHDSDAIIAAQ  323 (368)
T ss_dssp             SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE--------EEEEECEEEECC
T ss_pred             ccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec--------CCCceeEEEECC
Confidence                     011223457889988877665432         358999999988776665        556788999999


Q ss_pred             CCce--EEEeccCCeEEEEecCCCC
Q psy15191        237 DSRY--FLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       237 ~~~~--l~s~~~dg~i~iwd~~~~~  259 (312)
                      ||+.  ++++..|+.|++||..+++
T Consensus       324 DG~~~ly~s~~~~~~v~v~D~~tgk  348 (368)
T d1mdah_         324 DGASDNYANSAGTEVLDIYDAASDQ  348 (368)
T ss_dssp             SSSCEEEEEETTTTEEEEEESSSCE
T ss_pred             CCCEEEEEEeCCCCeEEEEECCCCC
Confidence            9973  4677789999999998874

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.54  E-value=1.3e-10  Score=93.07  Aligned_cols=277  Identities=13%  Similarity=0.092  Sum_probs=156.5

Q ss_pred             EEeccCCCceEEEEEeCCCCceEE--EE-ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------
Q psy15191         18 YTLTNHKSKVMAVKWNGEGGKVLY--TL-TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------   88 (312)
Q Consensus        18 ~~~~~h~~~v~~~~w~~~~~~~~~--~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------   88 (312)
                      -++. ..+.|..+.||.+++++..  .. ......+..|+|+|+      +++|.++.. +.+..|.+......      
T Consensus         8 Gtyt-~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d------~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~   79 (365)
T d1jofa_           8 GTWT-PPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHE------RKNIYGAAM-KKWSSFAVKSPTEIVHEASH   79 (365)
T ss_dssp             EESS-SSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTT------SSEEEEEEB-TEEEEEEEEETTEEEEEEEE
T ss_pred             Eeec-CCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCC------CCEEEEEeC-CcEEEEEEeCCCCeEEEeee
Confidence            3443 3556999999999987532  21 224455677999998      888877654 56888877643221      


Q ss_pred             ----ccccccCCCCCce--EEEEe-CCCcEEEEcCCCCccee----------eeeeeecccCCCccceeEEEECCCCCeE
Q psy15191         89 ----LPYHMRDDSKQLH--LLSCS-MDKSIIVWAPDPTTGLW----------LETARVGEVGGNTLGFYGCKFGPRGDYI  151 (312)
Q Consensus        89 ----~~~~~~~~~~~~~--l~~~~-~d~~i~i~d~~~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l  151 (312)
                          ........+++..  ++++. ..+.+..+.+.......          ...............+.++.|+|+|+++
T Consensus        80 ~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l  159 (365)
T d1jofa_          80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL  159 (365)
T ss_dssp             ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred             cCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEE
Confidence                2223344555553  33322 23555554332211100          0000000011223357899999999998


Q ss_pred             EEeec-CCeEEE-e-cccCceeee--ec--ccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEecc-----
Q psy15191        152 IAHGF-QGSLHL-D-VTTWKQIQT--LP--CHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACS-----  218 (312)
Q Consensus       152 ~~~~~-~~~i~~-d-~~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~-----  218 (312)
                      +++.. ...|.+ + ..+..+...  ..  ........++|+|+++++++.. .+++|.+|++............     
T Consensus       160 ~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~  239 (365)
T d1jofa_         160 YSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI  239 (365)
T ss_dssp             EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred             EEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccc
Confidence            88764 345655 2 222222211  11  2345688999999999886655 5789999999765433221110     


Q ss_pred             C-------CCCcccceeeEEEEEcCCCceEEEecc------CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191        219 D-------KTNGVHKRIIWGVAWSHDSRYFLTISR------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS  285 (312)
Q Consensus       219 ~-------~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  285 (312)
                      .       ............+.++|+|++|+++..      .+.|..|++.........      ..+...........+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~------~~~~~~~~~G~~p~~  313 (365)
T d1jofa_         240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ------LFLSPTPTSGGHSNA  313 (365)
T ss_dssp             CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE------EEEEECSSCCTTCCC
T ss_pred             cccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeE------eEeeEEEcCCCCccE
Confidence            0       001113445678999999999987743      224777777654221100      011222223455678


Q ss_pred             EEecc-CCCeEEEEecCCCcccceEEeC
Q psy15191        286 LAASH-DGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       286 ~~~s~-~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      ++++| +|++|+.+.    ..++.|.+|
T Consensus       314 i~~~p~~G~~l~va~----~~s~~v~v~  337 (365)
T d1jofa_         314 VSPCPWSDEWMAITD----DQEGWLEIY  337 (365)
T ss_dssp             EEECTTCTTEEEEEC----SSSCEEEEE
T ss_pred             EEecCCCCCEEEEEe----CCCCeEEEE
Confidence            99998 799887775    455668776

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.44  E-value=6.7e-12  Score=101.27  Aligned_cols=232  Identities=11%  Similarity=0.029  Sum_probs=134.6

Q ss_pred             cEEEEEEecCcCcCCCCceEEEe-cCCCcEEEeeecCCccccccc---------ccCCCCCc--eEEEEeCCC-------
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSC-SLDKTAILWKYVSEGNYLPYH---------MRDDSKQL--HLLSCSMDK-------  109 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vw~~~~~~~~~~~~---------~~~~~~~~--~l~~~~~d~-------  109 (312)
                      ......+.|+      |++|+.. ..+.+|.++|+++.+...+..         ..+++++.  +++..+.+.       
T Consensus        73 ~~s~t~gtpD------Gr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg  146 (441)
T d1qnia2          73 HISMTDGRYD------GKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDG  146 (441)
T ss_dssp             EEEEETTEEE------EEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSS
T ss_pred             CcceecccCC------CCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcc
Confidence            3444445566      8888554 577899999999887633222         22344554  333333322       


Q ss_pred             ----------cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe--------------------
Q psy15191        110 ----------SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS--------------------  159 (312)
Q Consensus       110 ----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------------------  159 (312)
                                .+..+|..+.+.  ..+...      ...+..+.++|+|+++++.+.+..                    
T Consensus       147 ~~~~~~~~~~~~~~iD~~t~~v--~~qI~v------~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n  218 (441)
T d1qnia2         147 TDFSLDNSYTMFTAIDAETMDV--AWQVIV------DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFN  218 (441)
T ss_dssp             SCCCGGGEEEEEEEEETTTCSE--EEEEEE------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEE
T ss_pred             cccccccccceEEeecCcccee--eEEEec------CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCC
Confidence                      123355554222  222221      124677899999999887765421                    


Q ss_pred             ---------------------EEE-ecccCceeeeecccCCceeEEEECCCCCEEEE-EecCCeEEEEEccCCCeE----
Q psy15191        160 ---------------------LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS-VSRDRRWGLYKRQSSGRL----  212 (312)
Q Consensus       160 ---------------------i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~----  212 (312)
                                           +.+ +....+....++.. .....+.++|||+++++ +..+++|.+||+.+....    
T Consensus       219 ~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~  297 (441)
T d1qnia2         219 VERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDK  297 (441)
T ss_dssp             HHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCB-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTS
T ss_pred             ccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCC-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhcc
Confidence                                 111 11112222223322 23567999999998755 567899999998762211    


Q ss_pred             ----EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-----eccCcce
Q psy15191        213 ----SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-----YGHGYEI  283 (312)
Q Consensus       213 ----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v  283 (312)
                          ..+.....    ..-.....+|+++|..+.+...|..|..|++......  ......++.+..+     .+|...+
T Consensus       298 ~~~~~~~~~~~~----~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~--~~~~~~~~v~~~~~v~y~~GH~~~~  371 (441)
T d1qnia2         298 IELRDTIVAEPE----LGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKH--YNGDRVNYIRQKLDVQYQPGHNHAS  371 (441)
T ss_dssp             SCGGGGEEECCB----CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHH--HTTCCCCCEEEEEECSSCEEEEEET
T ss_pred             CCcceEEEeecc----cccCcccceecCCceEEEcccccceEEEeccchhhhh--hccCCCceeEeccccccCCCCCccc
Confidence                00111000    1112344689999999999999999999998522100  0001111123333     5888889


Q ss_pred             eEEEeccCCCeEEEEecC
Q psy15191        284 YSLAASHDGTLLASACKA  301 (312)
Q Consensus       284 ~~~~~s~~~~~l~s~s~d  301 (312)
                      .+.+++|||++|++++.-
T Consensus       372 ~~~t~~pdGk~l~s~~k~  389 (441)
T d1qnia2         372 LTESRDADGKWLVVLSKF  389 (441)
T ss_dssp             TTTSTTCCCCEEEEEESC
T ss_pred             cccccCCCCcEEEecCcc
Confidence            999999999999999554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.43  E-value=1e-11  Score=100.24  Aligned_cols=224  Identities=9%  Similarity=-0.028  Sum_probs=133.9

Q ss_pred             EEEecCCCcEEEeeecCCcccc--------------------------------------cccccCCCCCceEEEE-eCC
Q psy15191         68 LVSCSLDKTAILWKYVSEGNYL--------------------------------------PYHMRDDSKQLHLLSC-SMD  108 (312)
Q Consensus        68 l~s~~~dg~i~vw~~~~~~~~~--------------------------------------~~~~~~~~~~~~l~~~-~~d  108 (312)
                      ++|++.+|.|++|++.+.+.+.                                      ..+....++|.++++. ..+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            6788899999999997765421                                      0111123567777554 577


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeE--EEeecCCe-----------------EE-EecccCc
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI--IAHGFQGS-----------------LH-LDVTTWK  168 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~~~~~~~-----------------i~-~d~~~~~  168 (312)
                      +.|.++|+++.+...+...      .....+..++|+|+++.+  +..+.+..                 +. +|..+.+
T Consensus        94 ~rVavIDl~t~k~~~ii~i------P~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~  167 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHI------PNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMD  167 (441)
T ss_dssp             TEEEEEETTTTEEEEEEEC------TTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCS
T ss_pred             CEEEEEECCCCcEeeEEec------CCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccce
Confidence            8899999998553332221      234568899999999853  33333221                 11 2666666


Q ss_pred             eeeeecccCCceeEEEECCCCCEEEEEecCC-----------------------------------------eEEEEEcc
Q psy15191        169 QIQTLPCHQLTITQLAFSPDDTHLVSVSRDR-----------------------------------------RWGLYKRQ  207 (312)
Q Consensus       169 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------------------------~i~~wd~~  207 (312)
                      ...... -.+....+.++|+|+++++.+.+.                                         .+.+++..
T Consensus       168 v~~qI~-v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~  246 (441)
T d1qnia2         168 VAWQVI-VDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRG  246 (441)
T ss_dssp             EEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSS
T ss_pred             eeEEEe-cCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEccc
Confidence            655554 234578899999999988876542                                         23333333


Q ss_pred             CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE-EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE
Q psy15191        208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL-TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL  286 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  286 (312)
                      ..+.+..+..        ......+.++|||++++ ++..+++|.+||+........-. ......+.......-.....
T Consensus       247 ~~~v~~~IPv--------gksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~-~~~~~~~~~~~~~glgplh~  317 (441)
T d1qnia2         247 ESEFTRYIPV--------PKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDK-IELRDTIVAEPELGLGPLHT  317 (441)
T ss_dssp             SCSSEEEECC--------BSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTS-SCGGGGEEECCBCCSCEEEE
T ss_pred             CCceEEEEeC--------CCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhcc-CCcceEEEeecccccCcccc
Confidence            3333333332        22345789999999875 56789999999986532100000 00000111111112234556


Q ss_pred             EeccCCCeEEEEecCCCcccceEEeC
Q psy15191        287 AASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       287 ~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                      +|.++|+.+.+...|++     |..|
T Consensus       318 ~fd~~g~~yts~~~ds~-----v~kw  338 (441)
T d1qnia2         318 TFDGRGNAYTTLFIDSQ-----VCKW  338 (441)
T ss_dssp             EECSSSEEEEEETTTTE-----EEEE
T ss_pred             eecCCceEEEcccccce-----EEEe
Confidence            89999998888865555     8877

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.34  E-value=1e-09  Score=83.48  Aligned_cols=218  Identities=12%  Similarity=0.003  Sum_probs=131.6

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEe-cCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCC
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSC-SLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDP  118 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~-~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~  118 (312)
                      .....+++.++      |++.++. +..+.+..++.......        .+..+...+++..+++....+.+++++-.+
T Consensus        14 ~~P~~vavd~d------G~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~   87 (260)
T d1rwia_          14 LSPSGVAVDSA------GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSN   87 (260)
T ss_dssp             CCEEEEEECTT------CCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCS
T ss_pred             CCCCEEEEcCC------CCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeecc
Confidence            34578888877      7765554 45567777765544321        122223345565666555555565554433


Q ss_pred             CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec
Q psy15191        119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR  197 (312)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  197 (312)
                      ..  ....      ......+.++++.++++++++-..+..+.. +...................++++|+++.+++...
T Consensus        88 ~~--~~~~------~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~  159 (260)
T d1rwia_          88 NQ--TVLP------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTD  159 (260)
T ss_dssp             CC--EECC------CCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGG
T ss_pred             ce--eeee------eeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccc
Confidence            21  1111      122345688999999987776655555555 43332222211122345578999999998888888


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY  277 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  277 (312)
                      ++.|..+|............       .......++++++|+++++....+.|..++.....             ...+.
T Consensus       160 ~~~i~~~d~~~~~~~~~~~~-------~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-------------~~~~~  219 (260)
T d1rwia_         160 NNRVVKLEAESNNQVVLPFT-------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-------------STVLP  219 (260)
T ss_dssp             GTEEEEECTTTCCEEECCCS-------SCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-------------CEECC
T ss_pred             cccccccccccceeeeeecc-------ccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-------------EEEEc
Confidence            89999999876544322111       33446789999999999888888888888754431             11111


Q ss_pred             -ccCcceeEEEeccCCCeEEEEe
Q psy15191        278 -GHGYEIYSLAASHDGTLLASAC  299 (312)
Q Consensus       278 -~~~~~v~~~~~s~~~~~l~s~s  299 (312)
                       ..-....+|+++++|.++++-.
T Consensus       220 ~~~~~~P~~i~~d~~g~l~vad~  242 (260)
T d1rwia_         220 FTGLNTPLAVAVDSDRTVYVADR  242 (260)
T ss_dssp             CCSCCCEEEEEECTTCCEEEEEG
T ss_pred             cCCCCCeEEEEEeCCCCEEEEEC
Confidence             1224568999999999888764

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.31  E-value=1.4e-09  Score=84.56  Aligned_cols=236  Identities=11%  Similarity=-0.046  Sum_probs=146.9

Q ss_pred             CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------cccccccCCCCCceEEEEeCCCc
Q psy15191         37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------YLPYHMRDDSKQLHLLSCSMDKS  110 (312)
Q Consensus        37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------~~~~~~~~~~~~~~l~~~~~d~~  110 (312)
                      .+.+..+... ..+..+++.|+      |+++++...+++|..++......      ..+..+.+.+++.++++...++.
T Consensus        18 ~~v~~~~p~~-~~~e~iAv~pd------G~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~   90 (302)
T d2p4oa1          18 AKIITSFPVN-TFLENLASAPD------GTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADS   90 (302)
T ss_dssp             EEEEEEECTT-CCEEEEEECTT------SCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred             ccEEEECCCC-CCcCCEEECCC------CCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCCeEEEecCCce
Confidence            3445556532 35788999998      99999999999888887654322      12333445778888888888888


Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec----------ccCCc
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP----------CHQLT  179 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~----------~~~~~  179 (312)
                      +..++.............    .........+++.++++++++.+.++.+.. +...........          .....
T Consensus        91 ~~~~~~~~~~~~~~~~~~----~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (302)
T d2p4oa1          91 IPVVSLVKSDGTVETLLT----LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA  166 (302)
T ss_dssp             CEEEEEECTTSCEEEEEE----CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred             EEEEEecccccceeeccc----cCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccc
Confidence            888876553332221111    123345788999999998888777777766 555443222111          12234


Q ss_pred             eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ...+.++. +.++++.+..+.|+.++.............     ........++++++|+++++...++.|..++.....
T Consensus       167 ~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~  240 (302)
T d2p4oa1         167 ANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIF-----VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRST  240 (302)
T ss_dssp             EEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEE-----EESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCE
T ss_pred             cccccccC-CceeeecCCCCeEEeccccccccccccccc-----cCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCE
Confidence            56666654 345556677888988887754332211100     022335579999999988888889999888764321


Q ss_pred             CCcccccccccceeEEeeccCcceeEEEe---ccCCCeEEEEec
Q psy15191        260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAA---SHDGTLLASACK  300 (312)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~s~s~  300 (312)
                      .           .+......-...++++|   ++|++.|..++.
T Consensus       241 ~-----------~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~  273 (302)
T d2p4oa1         241 T-----------IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  273 (302)
T ss_dssp             E-----------EEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             E-----------EEEecCCCCCCceEEEEcCCCCCCCEEEEECC
Confidence            0           12222333455789999   678887765543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.30  E-value=4.1e-10  Score=93.36  Aligned_cols=101  Identities=14%  Similarity=0.072  Sum_probs=65.7

Q ss_pred             ceEeCCCCeEEEEecc-----CCCceEEEEEeCCCCceE---------------------------EEEccccCcEEEEE
Q psy15191          7 DVVNGEGGKVLYTLTN-----HKSKVMAVKWNGEGGKVL---------------------------YTLTNHKSKVMAVK   54 (312)
Q Consensus         7 ~v~~~~~~~~~~~~~~-----h~~~v~~~~w~~~~~~~~---------------------------~~~~~h~~~v~~~~   54 (312)
                      .+|+..+++....+..     |...|.++.|+|++..++                           ..+..|...+..+.
T Consensus        39 ~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~  118 (470)
T d2bgra1          39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVT  118 (470)
T ss_dssp             EEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEE
T ss_pred             EEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCccccccc
Confidence            4677777776654443     345677777777654322                           22345777788899


Q ss_pred             EecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------------------------ccccCCCCCceEEEEeCC
Q psy15191         55 WVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------------------------YHMRDDSKQLHLLSCSMD  108 (312)
Q Consensus        55 ~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------------------------~~~~~~~~~~~l~~~~~d  108 (312)
                      |+|+      |+.+|.. .++.+.+|+..++....+                          ....++|++..|+....|
T Consensus       119 ~SPD------G~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         119 WSPV------GHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN  191 (470)
T ss_dssp             ECSS------TTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             cccC------cceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEec
Confidence            9888      8888885 467899998877654211                          112267888888887665


Q ss_pred             Cc-EEEE
Q psy15191        109 KS-IIVW  114 (312)
Q Consensus       109 ~~-i~i~  114 (312)
                      .. +..|
T Consensus       192 ~~~v~~~  198 (470)
T d2bgra1         192 DTEVPLI  198 (470)
T ss_dssp             CTTCCEE
T ss_pred             CCcCceE
Confidence            33 4433

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.27  E-value=2.1e-08  Score=78.19  Aligned_cols=226  Identities=12%  Similarity=0.086  Sum_probs=133.3

Q ss_pred             cEEEEEEecCcCcCCCCceEEEecC-------CCcEEEeeecCCcccc------------cccccCCCCCceEEEEeCCC
Q psy15191         49 KVMAVKWVLNTSLDPEHKDLVSCSL-------DKTAILWKYVSEGNYL------------PYHMRDDSKQLHLLSCSMDK  109 (312)
Q Consensus        49 ~v~~~~~~~~~~~~~~~~~l~s~~~-------dg~i~vw~~~~~~~~~------------~~~~~~~~~~~~l~~~~~d~  109 (312)
                      ....++|.++      |+++++...       +|+|..||..++....            ..-+...+++..++++...+
T Consensus        19 g~EGpa~d~d------G~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~   92 (314)
T d1pjxa_          19 GAEGPVFDKN------GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL   92 (314)
T ss_dssp             TCEEEEECTT------SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred             CCeEeEEeCC------CCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCC
Confidence            3556778777      777665432       4568888877665411            11233456676777777777


Q ss_pred             cEEEEcCCCCcceeeeeeeecccCCC-ccceeEEEECCCCCeEEEeec---------------CCeEEE-ecccCceeee
Q psy15191        110 SIIVWAPDPTTGLWLETARVGEVGGN-TLGFYGCKFGPRGDYIIAHGF---------------QGSLHL-DVTTWKQIQT  172 (312)
Q Consensus       110 ~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~---------------~~~i~~-d~~~~~~~~~  172 (312)
                      .|...+...........    ...+. -..+..+++.++|++.++-..               .|.+.. +.. .+....
T Consensus        93 ~i~~~~~~g~~~~~~~~----~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~  167 (314)
T d1pjxa_          93 GLLVVQTDGTFEEIAKK----DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV  167 (314)
T ss_dssp             EEEEEETTSCEEECCSB----CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred             eEEEEeCCCcEEEEEec----cccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEe
Confidence            78888876532211111    11111 123578999999987776322               123332 221 121111


Q ss_pred             ecccCCceeEEEECCCCC-----EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC
Q psy15191        173 LPCHQLTITQLAFSPDDT-----HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD  247 (312)
Q Consensus       173 ~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  247 (312)
                      . ..-...+.++|+|+++     ++++-+..+.|..||+.....+...................+++.++|++.++....
T Consensus       168 ~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~  246 (314)
T d1pjxa_         168 D-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS  246 (314)
T ss_dssp             E-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred             e-CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCC
Confidence            1 1223346889988764     445556788999999876554432211101000022345689999999988888788


Q ss_pred             CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEEEE
Q psy15191        248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASA  298 (312)
Q Consensus       248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~  298 (312)
                      +.|.+||...+.            ....+..+...+++++|.|+++ ++++.
T Consensus       247 g~I~~~dp~~g~------------~~~~i~~p~~~~t~~afg~d~~~lyVt~  286 (314)
T d1pjxa_         247 SHIEVFGPDGGQ------------PKMRIRCPFEKPSNLHFKPQTKTIFVTE  286 (314)
T ss_dssp             TEEEEECTTCBS------------CSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             CEEEEEeCCCCE------------EEEEEECCCCCEEEEEEeCCCCEEEEEE
Confidence            999999876542            2344455556788999999997 55666

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.26  E-value=3.3e-11  Score=100.08  Aligned_cols=153  Identities=13%  Similarity=0.040  Sum_probs=103.8

Q ss_pred             eEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-----ccCCceeEEEECCCCCEEEEEec---------CCeEEEE
Q psy15191        140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-----CHQLTITQLAFSPDDTHLVSVSR---------DRRWGLY  204 (312)
Q Consensus       140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~w  204 (312)
                      ..+.|.++++++..  .++.+.+ |..+.+....+.     .|...|.++.|||||++|+.++.         ++.+.+|
T Consensus        20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~   97 (470)
T d2bgra1          20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY   97 (470)
T ss_dssp             CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred             cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence            45789999987764  4566777 888887655433     45678999999999999998753         4678999


Q ss_pred             EccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe------ec
Q psy15191        205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL------YG  278 (312)
Q Consensus       205 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~  278 (312)
                      |+.+++.. .+..       +...+..+.|||||+++|.. .++.+++|+...+..................      ..
T Consensus        98 d~~~~~~~-~l~~-------~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~  168 (470)
T d2bgra1          98 DLNKRQLI-TEER-------IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE  168 (470)
T ss_dssp             ETTTTEEC-CSSC-------CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred             ECCCCccc-cccc-------CCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeee
Confidence            99976532 2222       66678899999999999985 5678999998876432111100000000000      01


Q ss_pred             cCcceeEEEeccCCCeEEEEecCCC
Q psy15191        279 HGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      ..+....+.|||||++|++...|..
T Consensus       169 ~~~~~~~~~wSPDGk~ia~~~~d~~  193 (470)
T d2bgra1         169 VFSAYSALWWSPNGTFLAYAQFNDT  193 (470)
T ss_dssp             TSSSSBCEEECTTSSEEEEEEEECT
T ss_pred             ecCCccccEECCCCCccceeEecCC
Confidence            2234567899999999999976643

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.25  E-value=2.7e-08  Score=76.24  Aligned_cols=227  Identities=8%  Similarity=0.069  Sum_probs=140.3

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc---------c----ccc-CCCCCceEEE-EeCCCcEE
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP---------Y----HMR-DDSKQLHLLS-CSMDKSII  112 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~---------~----~~~-~~~~~~~l~~-~~~d~~i~  112 (312)
                      .....+++.++      ++++++-.....|++||.+..-....         .    -.. ....+..+++ .+.++.|.
T Consensus        23 ~~P~gvavd~d------g~i~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~   96 (279)
T d1q7fa_          23 TEPSGVAVNAQ------NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ   96 (279)
T ss_dssp             SCEEEEEECTT------CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred             CCccEEEEcCC------CCEEEEECCCCEEEEEeCCCCEEEEecccCCCcccccccccccccccccccceeccCCccccc
Confidence            34678899888      88888877788999998653211000         0    000 0112223332 33445666


Q ss_pred             EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeee--cccCCceeEEEECCCCC
Q psy15191        113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTL--PCHQLTITQLAFSPDDT  190 (312)
Q Consensus       113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~  190 (312)
                      .++...   .......    .........+++.++++.+++....+.+.+-..+.++...+  ..+......+++.++++
T Consensus        97 ~~~~~g---~~~~~~~----~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~  169 (279)
T d1q7fa_          97 IYNQYG---QFVRKFG----ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE  169 (279)
T ss_dssp             EECTTS---CEEEEEC----TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred             cccccc---cceeecC----CCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeecccee
Confidence            666542   2122211    12334567899999999888877777777622234444443  24556778899999999


Q ss_pred             EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCCCCCCcccccccc
Q psy15191        191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPTEEDLVQNTL  269 (312)
Q Consensus       191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~  269 (312)
                      .+++....+.|++||.. ++.+..+....     ......++++.|+|+++++-.. ++.|.+|+....           
T Consensus       170 i~v~d~~~~~V~~~d~~-G~~~~~~g~~g-----~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~-----------  232 (279)
T d1q7fa_         170 IFISDNRAHCVKVFNYE-GQYLRQIGGEG-----ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-----------  232 (279)
T ss_dssp             EEEEEGGGTEEEEEETT-CCEEEEESCTT-----TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-----------
T ss_pred             EEeeeccccceeeeecC-Cceeeeecccc-----cccCCcccccccCCeEEEEECCCCcEEEEECCCCC-----------
Confidence            88888889999999976 44444443211     2334678999999998877544 457999974321           


Q ss_pred             cceeEEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191        270 WPEVQKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW  312 (312)
Q Consensus       270 ~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW  312 (312)
                        .+..+..  .......|++.|+|.++++. .+..     |++|
T Consensus       233 --~~~~~~~~~~~~~p~~vav~~dG~l~V~~-~n~~-----v~~f  269 (279)
T d1q7fa_         233 --LISALESKVKHAQCFDVALMDDGSVVLAS-KDYR-----LYIY  269 (279)
T ss_dssp             --EEEEEEESSCCSCEEEEEEETTTEEEEEE-TTTE-----EEEE
T ss_pred             --EEEEEeCCCCCCCEeEEEEeCCCcEEEEe-CCCe-----EEEE
Confidence              3444432  23357899999999865543 4444     8875

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=6.9e-08  Score=73.31  Aligned_cols=225  Identities=10%  Similarity=0.017  Sum_probs=124.1

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC-C--cEEEeeecCCccc-------ccccccCCCCCceE
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-K--TAILWKYVSEGNY-------LPYHMRDDSKQLHL  102 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-g--~i~vw~~~~~~~~-------~~~~~~~~~~~~~l  102 (312)
                      |.++.. .+.+..+...+.+.+|||+      |+.||-...+ +  .+.+.+...+...       ......+++++..+
T Consensus        25 d~dG~~-~~~l~~~~~~~~sP~wSPD------Gk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i   97 (269)
T d2hqsa1          25 DYDGYN-QFVVHRSPQPLMSPAWSPD------GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKL   97 (269)
T ss_dssp             ETTSCS-CEEEEEESSCEEEEEECTT------SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEE
T ss_pred             cCCCCC-cEEEecCCCceeeeEECCC------CCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCCee
Confidence            444443 4444445678889999999      9999865433 2  3555555554431       12223345666655


Q ss_pred             EEEeC-CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCe--EEE-ecccCceeeeecccC
Q psy15191        103 LSCSM-DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGS--LHL-DVTTWKQIQTLPCHQ  177 (312)
Q Consensus       103 ~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~--i~~-d~~~~~~~~~~~~~~  177 (312)
                      +.... ++...++..........      .............+++++..++.. ..++.  +.+ +....... ......
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~-~~~~~~  170 (269)
T d2hqsa1          98 AFALSKTGSLNLYVMDLASGQIR------QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEG  170 (269)
T ss_dssp             EEEECTTSSCEEEEEETTTCCEE------ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSS
T ss_pred             eEeeecCCccceeecccccccce------eeeeccccccccccccccccceecccccCCceEeeeecccccce-eeeccc
Confidence            54432 22222222211111111      111223334455677777665544 34443  333 44443332 233455


Q ss_pred             CceeEEEECCCCCEEEEEecC-CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc---CCeEEEE
Q psy15191        178 LTITQLAFSPDDTHLVSVSRD-RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGVCVVW  253 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iw  253 (312)
                      .......|+|+++.++..+.+ +...+|.............       .........|+|||+.|+..+.   ...|+++
T Consensus       171 ~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~  243 (269)
T d2hqsa1         171 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS-------STFLDETPSLAPNGTMVIYSSSQGMGSVLNLV  243 (269)
T ss_dssp             SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC-------CSSSCEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred             ccccccccccccceeEEEeecCCceeeeEeecccccceEee-------cCccccceEECCCCCEEEEEEcCCCCcEEEEE
Confidence            667788999999998877655 3444444433222222222       3334566789999998875554   3378889


Q ss_pred             ecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191        254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD  291 (312)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  291 (312)
                      ++...             ....+....+.+...+|||-
T Consensus       244 ~~dg~-------------~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         244 STDGR-------------FKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             ETTSC-------------CEEECCCSSSEEEEEEECCC
T ss_pred             ECCCC-------------CEEEEeCCCCcEEeEEeCCC
Confidence            98765             34556666778888999983

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.08  E-value=8.6e-07  Score=69.00  Aligned_cols=231  Identities=8%  Similarity=0.002  Sum_probs=131.0

Q ss_pred             ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------ccccCCCCCceEEEEeCC----CcEEE
Q psy15191         46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------YHMRDDSKQLHLLSCSMD----KSIIV  113 (312)
Q Consensus        46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------~~~~~~~~~~~l~~~~~d----~~i~i  113 (312)
                      ....+..++|.++      |++.++-...++|..|+.+.+.....        .-+...+++.++++...+    +.+..
T Consensus        38 ~~~~lEG~~~D~~------G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~  111 (319)
T d2dg1a1          38 KGLQLEGLNFDRQ------GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA  111 (319)
T ss_dssp             SCCCEEEEEECTT------SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred             CCcCcEeCEECCC------CCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEE
Confidence            3445678888877      88777777888888888776543211        122234555555443321    22333


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec------CCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      .+.........  .   ........+..+++.++|++.++...      .+.+.. +...... ..+...-...+.++|+
T Consensus       112 ~~~~~~~~~~~--~---~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-~~~~~~~~~pnGia~s  185 (319)
T d2dg1a1         112 ATENGDNLQDI--I---EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISVANGIALS  185 (319)
T ss_dssp             ECTTSCSCEEE--E---CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESSEEEEEEC
T ss_pred             EcCCCceeeee--c---cCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccccee-EEEeeccceeeeeeec
Confidence            33333221111  1   11122345778999999987665322      122332 3322222 2222222345789999


Q ss_pred             CCCCEEE-EEecCCeEEEEEccCCCeEE-EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191        187 PDDTHLV-SVSRDRRWGLYKRQSSGRLS-LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL  264 (312)
Q Consensus       187 ~~~~~l~-~~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  264 (312)
                      |+++.|+ +-+..+.|+.||+....... ..................+++.++|++.++....+.|.+||- .+.     
T Consensus       186 ~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~-----  259 (319)
T d2dg1a1         186 TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGY-----  259 (319)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSC-----
T ss_pred             cccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCc-----
Confidence            9998664 44667899999987543221 111100000002223567999999999888888999999985 332     


Q ss_pred             ccccccceeEEee------ccCcceeEEEeccCCCeEEEEecC
Q psy15191        265 VQNTLWPEVQKLY------GHGYEIYSLAASHDGTLLASACKA  301 (312)
Q Consensus       265 ~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~s~s~d  301 (312)
                             .+..+.      ++...+++++|.+++..+++...+
T Consensus       260 -------~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~  295 (319)
T d2dg1a1         260 -------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  295 (319)
T ss_dssp             -------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             -------EEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcCC
Confidence                   344443      234467899999988766665543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.05  E-value=1.5e-07  Score=71.15  Aligned_cols=189  Identities=10%  Similarity=-0.039  Sum_probs=113.5

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCcEEEEcCCCCc
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT  120 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  120 (312)
                      .....+++.++      +.++++....+.+++++-.+.....       +..+...+++.++++-..+..+..++.....
T Consensus        57 ~~p~gvav~~~------g~i~v~d~~~~~i~~~~~~~~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~  130 (260)
T d1rwia_          57 YQPQGLAVDGA------GTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT  130 (260)
T ss_dssp             CSCCCEEECTT------CCEEEEETTTEEEEECTTCSCCEECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSS
T ss_pred             cCceEEEEcCC------CCEEEeeeeeceeeeeeeccceeeeeeeeeeecccccccccceeEeeccccccccccccccce
Confidence            34567788777      8888887777777776654443321       1111223344444444444445555544321


Q ss_pred             ceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC
Q psy15191        121 GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR  199 (312)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  199 (312)
                      ..   ...    .........++++++++.+++...++.+.. +...................|+++++|+++++....+
T Consensus       131 ~~---~~~----~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~  203 (260)
T d1rwia_         131 QT---VLP----FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTN  203 (260)
T ss_dssp             CE---ECC----CCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTT
T ss_pred             ee---eee----ecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCC
Confidence            11   011    112234578999999998877777777776 5543333222223445678899999999888887888


Q ss_pred             eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191        200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG  256 (312)
Q Consensus       200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  256 (312)
                      .|..++....... .+...      .-.....|+++++|.++++-..++.|+.++..
T Consensus       204 ~i~~~~~~~~~~~-~~~~~------~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         204 QVVKLLAGSTTST-VLPFT------GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             EEEEECTTCSCCE-ECCCC------SCCCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             EEEEEeCCCCeEE-EEccC------CCCCeEEEEEeCCCCEEEEECCCCEEEEEeCC
Confidence            8888876543322 22111      22346789999999988887777877766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.03  E-value=9.7e-08  Score=76.01  Aligned_cols=164  Identities=12%  Similarity=0.036  Sum_probs=97.5

Q ss_pred             cccCCCCCceEEEEeC-CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCc
Q psy15191         92 HMRDDSKQLHLLSCSM-DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWK  168 (312)
Q Consensus        92 ~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~  168 (312)
                      .+.++|++.+++++.. ...|.+|+.......... ..... .........++|+|+++++++.. .++.|.+ +.....
T Consensus       149 ~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~-~~~~~-~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~  226 (365)
T d1jofa_         149 GMVFDPTETYLYSADLTANKLWTHRKLASGEVELV-GSVDA-PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE-EEEEC-SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             EEEECCCCCEEEEeeCCCCEEEEEEccCCCceeec-cceee-cCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence            4556788888777754 457888876543222111 11111 12345678999999999886655 5667766 443322


Q ss_pred             e--eeeec-----------------ccCCceeEEEECCCCCEEEEEec------CCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191        169 Q--IQTLP-----------------CHQLTITQLAFSPDDTHLVSVSR------DRRWGLYKRQSSGRLSLVACSDKTNG  223 (312)
Q Consensus       169 ~--~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~  223 (312)
                      .  .....                 .+......+.++|||++|+++..      .+.|..|++.....+...........
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~  306 (365)
T d1jofa_         227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT  306 (365)
T ss_dssp             CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS
T ss_pred             ceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEc
Confidence            1  11110                 12234567899999999988743      23477788776544332221110000


Q ss_pred             ccceeeEEEEEcC-CCceEEEe-ccCCeEEEEecCCC
Q psy15191        224 VHKRIIWGVAWSH-DSRYFLTI-SRDGVCVVWGLGEP  258 (312)
Q Consensus       224 ~~~~~v~~~~~~~-~~~~l~s~-~~dg~i~iwd~~~~  258 (312)
                       ......+++++| +|++|+.+ ..++.|.+|++...
T Consensus       307 -~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         307 -SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             -CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             -CCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence             223456789998 78977666 46789999988654

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.94  E-value=2.1e-06  Score=64.77  Aligned_cols=180  Identities=13%  Similarity=0.105  Sum_probs=102.8

Q ss_pred             cccCCCCCceEEEEeCCC---cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEE---ec
Q psy15191         92 HMRDDSKQLHLLSCSMDK---SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL---DV  164 (312)
Q Consensus        92 ~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~---d~  164 (312)
                      ...++|+|..|+......   .+.+.+.........        ..+........|+|+|+.++.... .+...+   ..
T Consensus        43 sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~  114 (269)
T d2hqsa1          43 SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--------ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL  114 (269)
T ss_dssp             EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE--------ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred             eeEECCCCCEEEEEEeeccCcceeeeecccCceeEE--------eeeecccccceecCCCCeeeEeeecCCccceeeccc
Confidence            445788998988765443   355556555332211        134456678899999999886553 222222   11


Q ss_pred             ccCceeeeecccCCceeEEEECCCCCEEEEE-ecCCe--EEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE
Q psy15191        165 TTWKQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDRR--WGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF  241 (312)
Q Consensus       165 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  241 (312)
                      .... ...............+++++..++.. ..++.  |.+.++..........        .........|+|+++.+
T Consensus       115 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~--------~~~~~~~~~~spdg~~~  185 (269)
T d2hqsa1         115 ASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW--------EGSQNQDADVSSDGKFM  185 (269)
T ss_dssp             TTCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC--------SSSEEEEEEECTTSSEE
T ss_pred             cccc-ceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeec--------cccccccccccccccee
Confidence            1111 11222233444555677777655544 34554  5555655543332222        44556678999999988


Q ss_pred             EEeccCC-e--EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        242 LTISRDG-V--CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       242 ~s~~~dg-~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                      +..+.++ .  +.+.+...+             .. .+..+........|||||+.|+..+..+
T Consensus       186 ~~~~~~~~~~~i~~~~~~~~-------------~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~  235 (269)
T d2hqsa1         186 VMVSSNGGQQHIAKQDLATG-------------GV-QVLSSTFLDETPSLAPNGTMVIYSSSQG  235 (269)
T ss_dssp             EEEEECSSCEEEEEEETTTC-------------CE-EECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred             EEEeecCCceeeeEeecccc-------------cc-eEeecCccccceEECCCCCEEEEEEcCC
Confidence            8776544 3  444444333             12 2333455667889999999998776543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.94  E-value=2.4e-07  Score=71.71  Aligned_cols=190  Identities=10%  Similarity=0.021  Sum_probs=118.6

Q ss_pred             cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc--Ccee
Q psy15191         94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT--WKQI  170 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~--~~~~  170 (312)
                      ...+++.++++...+++|..++......   . .     ......+.+++|+++|+++++...++.+.. +...  ....
T Consensus        34 Av~pdG~l~vt~~~~~~I~~i~p~g~~~---~-~-----~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          34 ASAPDGTIFVTNHEVGEIVSITPDGNQQ---I-H-----ATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             EECTTSCEEEEETTTTEEEEECTTCCEE---E-E-----EECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             EECCCCCEEEEeCCCCEEEEEeCCCCEE---E-E-----EcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            4467788888888899898888664211   1 1     123356889999999998888777776655 3222  2221


Q ss_pred             eeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC---cccceeeEEEEEcCCCceEEEecc
Q psy15191        171 QTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN---GVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       171 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      .... ......+.+++.++++++++-+.++.+..+|.................   .........+.++. +.++++.+.
T Consensus       105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~  183 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTE  183 (302)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETT
T ss_pred             eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCC
Confidence            1111 234567899999999999888888999988887654333322211111   11223455666653 345666678


Q ss_pred             CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191        247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK  303 (312)
Q Consensus       247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~  303 (312)
                      .+.|+.+++.......         ... ..........+++.++|+++++...+++
T Consensus       184 ~~~i~~~~~~~~~~~~---------~~~-~~~~~~~pdgia~d~dG~l~va~~~~~~  230 (302)
T d2p4oa1         184 KMLLLRIPVDSTDKPG---------EPE-IFVEQTNIDDFAFDVEGNLYGATHIYNS  230 (302)
T ss_dssp             TTEEEEEEBCTTSCBC---------CCE-EEEESCCCSSEEEBTTCCEEEECBTTCC
T ss_pred             CCeEEecccccccccc---------ccc-cccCCCCCcceEECCCCCEEEEEcCCCc
Confidence            8899988887653221         111 1122344678999999998887754443

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.91  E-value=4.9e-06  Score=64.41  Aligned_cols=208  Identities=11%  Similarity=0.069  Sum_probs=118.6

Q ss_pred             EEEeCCCCceEEEEccc----cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc------------cc
Q psy15191         30 VKWNGEGGKVLYTLTNH----KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY------------HM   93 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~------------~~   93 (312)
                      ..|++++++........    ......++|.++      +..++.+...+.|...+.+........            -.
T Consensus        49 ~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~d------g~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl  122 (314)
T d1pjxa_          49 LRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD------ANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDC  122 (314)
T ss_dssp             EEECTTTCCEEEEECCEETTEECCEEEEEECSS------SSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEE
T ss_pred             EEEECCCCcEEEEECCccccCCCcceeEEEeCC------CCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEE
Confidence            45788777654443322    234667889888      877777766667888887654331111            11


Q ss_pred             cCCCCCceEEEEeC---------------CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC----eEE-E
Q psy15191         94 RDDSKQLHLLSCSM---------------DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD----YII-A  153 (312)
Q Consensus        94 ~~~~~~~~l~~~~~---------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~-~  153 (312)
                      ...+++.+.++-..               .|.|..++.+.   ......      ......+.++|+|++.    .|+ +
T Consensus       123 ~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---~~~~~~------~~~~~pNGi~~~~d~d~~~~~lyv~  193 (314)
T d1pjxa_         123 AFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---QMIQVD------TAFQFPNGIAVRHMNDGRPYQLIVA  193 (314)
T ss_dssp             EECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---CEEEEE------EEESSEEEEEEEECTTSCEEEEEEE
T ss_pred             EECCCCCEEEecCccCcccccccceeccCCceEEEEeecC---ceeEee------CCcceeeeeEECCCCCcceeEEEEE
Confidence            12333333333211               11222222221   000000      1112345788988764    344 4


Q ss_pred             eecCCeEEE-ecccCceee------eec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        154 HGFQGSLHL-DVTTWKQIQ------TLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       154 ~~~~~~i~~-d~~~~~~~~------~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                      -+..+.|.. |+..-....      .+. ........|++.++|+..++....+.|.+||.+.......+..       .
T Consensus       194 d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~-------p  266 (314)
T d1pjxa_         194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-------P  266 (314)
T ss_dssp             ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-------S
T ss_pred             eecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEEC-------C
Confidence            455666655 433221111      111 1223456899999999888887889999999887665555554       3


Q ss_pred             ceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCCC
Q psy15191        226 KRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       226 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ...+++++|.|+++ ++++.+.+|.|..+++....
T Consensus       267 ~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G  301 (314)
T d1pjxa_         267 FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG  301 (314)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred             CCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCC
Confidence            34578899999987 55677788988888876654

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.85  E-value=6.9e-06  Score=62.41  Aligned_cols=231  Identities=10%  Similarity=0.096  Sum_probs=132.3

Q ss_pred             CCceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEcc------ccCcEEEEEEecCcCcCCCCceEE-EecCCCcE
Q psy15191          5 PGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTN------HKSKVMAVKWVLNTSLDPEHKDLV-SCSLDKTA   77 (312)
Q Consensus         5 ~~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~~~~~l~-s~~~dg~i   77 (312)
                      |..|.-...|+. +........|.  .|+++ |+.++.+..      .......+++.++    . +..++ ..+.++.|
T Consensus        25 P~gvavd~dg~i-~VaD~~n~rI~--v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~----~-~~~~~~~~~~~~~i   95 (279)
T d1q7fa_          25 PSGVAVNAQNDI-IVADTNNHRIQ--IFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRN----S-GDIIVTERSPTHQI   95 (279)
T ss_dssp             EEEEEECTTCCE-EEEEGGGTEEE--EECTT-SCEEEEECCBSSSTTCBSSEEEEEEETT----T-TEEEEEECGGGCEE
T ss_pred             ccEEEEcCCCCE-EEEECCCCEEE--EEeCC-CCEEEEecccCCCccccccccccccccc----c-cccceeccCCcccc
Confidence            444444344553 33332333442  26765 566666632      1123445555544    1 33343 33445567


Q ss_pred             EEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191         78 ILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD  149 (312)
Q Consensus        78 ~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  149 (312)
                      .+++.......        ........+++.++++....+.+.+++...   ..+....   ...+......+++.++++
T Consensus        96 ~~~~~~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g---~~~~~~g---~~~~~~~~~~i~~d~~g~  169 (279)
T d1q7fa_          96 QIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFG---CSKHLEFPNGVVVNDKQE  169 (279)
T ss_dssp             EEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEE---CTTTCSSEEEEEECSSSE
T ss_pred             ccccccccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC---ceeeccc---ccccccccceeeecccee
Confidence            66665432211        111222344555555555556666666543   2222221   123455678899999999


Q ss_pred             eEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191        150 YIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDKTNGVH  225 (312)
Q Consensus       150 ~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~  225 (312)
                      .+++....+.|.+ +.. .+....+.  +.......|+++++|+.+++-.. ++.|.+|+.. ++.+..+....     .
T Consensus       170 i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G~~~~~~~~~~-----~  242 (279)
T d1q7fa_         170 IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKV-----K  242 (279)
T ss_dssp             EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESS-----C
T ss_pred             EEeeeccccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC-CCEEEEEeCCC-----C
Confidence            8888888888888 433 34443432  34456789999999997776543 4579999854 55555554322     2


Q ss_pred             ceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ......+++.|+|.++++ ..++.|++|.....
T Consensus       243 ~~~p~~vav~~dG~l~V~-~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         243 HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL  274 (279)
T ss_dssp             CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             CCCEeEEEEeCCCcEEEE-eCCCeEEEEEeeee
Confidence            234678999999986665 56889999987664

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=3e-07  Score=75.47  Aligned_cols=192  Identities=12%  Similarity=0.091  Sum_probs=108.1

Q ss_pred             EEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------cccccccCCCCCceEEEEe---------CCCcEEE
Q psy15191         54 KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------YLPYHMRDDSKQLHLLSCS---------MDKSIIV  113 (312)
Q Consensus        54 ~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~~~~~l~~~~---------~d~~i~i  113 (312)
                      .|.++      +.++.. ..+|.|.+||+.++..           ..+.....++++.+++...         ..+.+.+
T Consensus        23 ~W~~~------~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i   95 (465)
T d1xfda1          23 KWISD------TEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (465)
T ss_dssp             CBSSS------SCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             EEeCC------CcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEE
Confidence            46666      555443 4577899999887664           1222223578887777653         3567889


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccCC-------------
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQL-------------  178 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~-------------  178 (312)
                      +|+.+++...+..     .......+....|||+|+.++-.. ++.+.+ +..+....+... +...             
T Consensus        96 ~d~~~~~~~~l~~-----~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyee  169 (465)
T d1xfda1          96 SKIPHGDPQSLDP-----PEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE  169 (465)
T ss_dssp             EESSSCCCEECCC-----TTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred             EEccCCceeeccC-----ccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhh
Confidence            9998765432211     122334456688999999988765 455666 444433332221 1111             


Q ss_pred             ----ceeEEEECCCCCEEEEEecC-CeEEE---------------------------------EEccCCCeEEEEeccCC
Q psy15191        179 ----TITQLAFSPDDTHLVSVSRD-RRWGL---------------------------------YKRQSSGRLSLVACSDK  220 (312)
Q Consensus       179 ----~v~~~~~~~~~~~l~~~~~d-~~i~~---------------------------------wd~~~~~~~~~~~~~~~  220 (312)
                          .-..+-|||||++|+....| ..+..                                 +|+............ .
T Consensus       170 e~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~-~  248 (465)
T d1xfda1         170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP-D  248 (465)
T ss_dssp             TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC-C
T ss_pred             hhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEecc-C
Confidence                12467899999999987533 22333                                 333222211111100 0


Q ss_pred             CCcccceeeEEEEEcCCCceEEEecc-CC---eEEEEecCCCC
Q psy15191        221 TNGVHKRIIWGVAWSHDSRYFLTISR-DG---VCVVWGLGEPP  259 (312)
Q Consensus       221 ~~~~~~~~v~~~~~~~~~~~l~s~~~-dg---~i~iwd~~~~~  259 (312)
                      ........+..+.|+|++++++.... +.   .|.++|..++.
T Consensus       249 ~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~  291 (465)
T d1xfda1         249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV  291 (465)
T ss_dssp             CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred             cCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCc
Confidence            00112345778999999987765433 22   67788887764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.76  E-value=9.8e-06  Score=62.85  Aligned_cols=189  Identities=10%  Similarity=0.024  Sum_probs=106.5

Q ss_pred             CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----CeEEE-ecccCce
Q psy15191         95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----GSLHL-DVTTWKQ  169 (312)
Q Consensus        95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~-d~~~~~~  169 (312)
                      +.+++.++++-...+.|..|+....+...  ...     ........++++++|+++++...+    +.+.. +.....+
T Consensus        47 ~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~--~~~-----~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~  119 (319)
T d2dg1a1          47 FDRQGQLFLLDVFEGNIFKINPETKEIKR--PFV-----SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL  119 (319)
T ss_dssp             ECTTSCEEEEETTTCEEEEECTTTCCEEE--EEE-----CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred             ECCCCCEEEEECCCCEEEEEECCCCeEEE--EEe-----CCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCcee
Confidence            34556666666677888888877633211  111     233457889999999887765332    22333 5544444


Q ss_pred             eeeec--ccCCceeEEEECCCCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE
Q psy15191        170 IQTLP--CHQLTITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF  241 (312)
Q Consensus       170 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  241 (312)
                      .....  ......+.+++.++|++.++-...      +.+..++..... +..+..       .-...+.++|+|+++.|
T Consensus       120 ~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~-------~~~~pnGia~s~dg~~l  191 (319)
T d2dg1a1         120 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQ-------NISVANGIALSTDEKVL  191 (319)
T ss_dssp             EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEE-------EESSEEEEEECTTSSEE
T ss_pred             eeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce-eEEEee-------ccceeeeeeeccccceE
Confidence            33332  123457889999999876664321      234444444322 222221       22335789999999865


Q ss_pred             -EEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191        242 -LTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT  302 (312)
Q Consensus       242 -~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~  302 (312)
                       ++-+..+.|+.|++...........    .............-.|++.++|++.++....+
T Consensus       192 yvad~~~~~I~~~d~~~~g~~~~~~~----~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g  249 (319)
T d2dg1a1         192 WVTETTANRLHRIALEDDGVTIQPFG----ATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG  249 (319)
T ss_dssp             EEEEGGGTEEEEEEECTTSSSEEEEE----EEEEEECCSSSEEEEEEEBTTCCEEEEEETTT
T ss_pred             EEecccCCceEEEEEcCCCceecccc----ceeeeccCCccceeeeeEcCCCCEEEEEcCCC
Confidence             5556788999999875532211000    01111111122356789999999888774433

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.1e-07  Score=72.89  Aligned_cols=148  Identities=11%  Similarity=0.130  Sum_probs=93.2

Q ss_pred             EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec---------CCeEEE-ecccCceeeee
Q psy15191        104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF---------QGSLHL-DVTTWKQIQTL  173 (312)
Q Consensus       104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~i~~-d~~~~~~~~~~  173 (312)
                      .-..+|.|.+||+.+++...+....  .  -....+....|+||+++++....         .+.+.+ |+.+.......
T Consensus        32 ~~~~~g~i~~~~~~~~~~~~l~~~~--~--~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~  107 (465)
T d1xfda1          32 YREQKGTVRLWNVETNTSTVLIEGK--K--IESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD  107 (465)
T ss_dssp             CCCSSSCEEEBCGGGCCCEEEECTT--T--TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred             EEeCCCcEEEEECCCCCEEEEEcCc--c--ccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeecc
Confidence            3456788999999876543332211  1  12335677889999999887643         456666 77766654332


Q ss_pred             c--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-----------cceeeEEEEEcCCCce
Q psy15191        174 P--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-----------HKRIIWGVAWSHDSRY  240 (312)
Q Consensus       174 ~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~  240 (312)
                      .  .....+....|||||+.+|-.. ++.|.+.+.......+...........           ....-.++.|||||++
T Consensus       108 ~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~  186 (465)
T d1xfda1         108 PPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR  186 (465)
T ss_dssp             CTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE
T ss_pred             CccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCe
Confidence            2  3344566789999999998864 778999888877666655432211100           0011246789999999


Q ss_pred             EEEecc-CCeEEEEecC
Q psy15191        241 FLTISR-DGVCVVWGLG  256 (312)
Q Consensus       241 l~s~~~-dg~i~iwd~~  256 (312)
                      ||.... +..|..+.+.
T Consensus       187 iaf~~~D~s~V~~~~~~  203 (465)
T d1xfda1         187 LAYAAINDSRVPIMELP  203 (465)
T ss_dssp             EEEEEEECTTSCEEEEC
T ss_pred             EEEEEecccccceeecc
Confidence            998753 3445555443

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.54  E-value=7.8e-05  Score=56.87  Aligned_cols=181  Identities=13%  Similarity=0.052  Sum_probs=108.3

Q ss_pred             CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----CeEEE-ecccCcee
Q psy15191         96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----GSLHL-DVTTWKQI  170 (312)
Q Consensus        96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~-d~~~~~~~  170 (312)
                      .+++.++ .++.+ .+..+|..+++...+...   ........+..+.+.|+|++.++....    +.-.+ .....+..
T Consensus        67 ~~dg~l~-va~~~-gl~~~d~~tg~~~~l~~~---~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~  141 (295)
T d2ghsa1          67 ISDSKQL-IASDD-GLFLRDTATGVLTLHAEL---ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT  141 (295)
T ss_dssp             EETTEEE-EEETT-EEEEEETTTCCEEEEECS---STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE
T ss_pred             ecCCCEE-EEEeC-ccEEeecccceeeEEeee---ecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEE
Confidence            3444444 44554 488899887653332211   111233468899999999976664322    11222 22333333


Q ss_pred             eeecccCCceeEEEECCCCCEEEE-EecCCeEEEEEccCCC------eEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191        171 QTLPCHQLTITQLAFSPDDTHLVS-VSRDRRWGLYKRQSSG------RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT  243 (312)
Q Consensus       171 ~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  243 (312)
                      .... .-...+.++|+++++.++. -+..+.|..|++....      .........     .......+++..+|++.++
T Consensus       142 ~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~-----~~g~pdG~~vD~~GnlWva  215 (295)
T d2ghsa1         142 KLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG-----IKGGMDGSVCDAEGHIWNA  215 (295)
T ss_dssp             EEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT-----SSSEEEEEEECTTSCEEEE
T ss_pred             EEee-ccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCc-----ccccccceEEcCCCCEEee
Confidence            3222 2334578999999986654 4567889999875321      111111111     3345678999999998888


Q ss_pred             eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec-cCCCeE-EEEec
Q psy15191        244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS-HDGTLL-ASACK  300 (312)
Q Consensus       244 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l-~s~s~  300 (312)
                      .-..+.|..||-...             .+..+.-....+++++|- |+.+.| +|...
T Consensus       216 ~~~~g~V~~~dp~G~-------------~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~  261 (295)
T d2ghsa1         216 RWGEGAVDRYDTDGN-------------HIARYEVPGKQTTCPAFIGPDASRLLVTSAR  261 (295)
T ss_dssp             EETTTEEEEECTTCC-------------EEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             eeCCCceEEecCCCc-------------EeeEecCCCCceEEEEEeCCCCCEEEEEECC
Confidence            778889999985432             566666556679999995 665544 55443

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.35  E-value=0.00025  Score=53.96  Aligned_cols=171  Identities=9%  Similarity=-0.064  Sum_probs=100.6

Q ss_pred             eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec----ccCCcee
Q psy15191        106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP----CHQLTIT  181 (312)
Q Consensus       106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~----~~~~~v~  181 (312)
                      -..+.|..||..+++...   ..      ....+.++++.+++.++++ +.+|.+++|..+.+......    .....++
T Consensus        37 i~~~~I~r~d~~~g~~~~---~~------~~~~~~~i~~~~dg~l~va-~~~gl~~~d~~tg~~~~l~~~~~~~~~~~~n  106 (295)
T d2ghsa1          37 ILERELHELHLASGRKTV---HA------LPFMGSALAKISDSKQLIA-SDDGLFLRDTATGVLTLHAELESDLPGNRSN  106 (295)
T ss_dssp             GGGTEEEEEETTTTEEEE---EE------CSSCEEEEEEEETTEEEEE-ETTEEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred             CCCCEEEEEECCCCeEEE---EE------CCCCcEEEEEecCCCEEEE-EeCccEEeecccceeeEEeeeecCCCcccce
Confidence            345667777777643211   11      1234678888888876654 56776766888777654332    1234688


Q ss_pred             EEEECCCCCEEEEEecC----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecC
Q psy15191        182 QLAFSPDDTHLVSVSRD----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLG  256 (312)
Q Consensus       182 ~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~  256 (312)
                      .+.+.|+|++.++...+    +.-.+|.+..++......        .-...+.++|+++++.+ ++-+..+.|+.|++.
T Consensus       107 d~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~--------~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d  178 (295)
T d2ghsa1         107 DGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA--------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD  178 (295)
T ss_dssp             EEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE--------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             eeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee--------ccCCcceeeecCCCceEEEeecccceeeEeeec
Confidence            99999999977665432    345667666554333332        22335689999999865 455667889999875


Q ss_pred             CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191        257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  298 (312)
                      ........   + ........+..+....+++..+|++.++.
T Consensus       179 ~~~~~~~~---~-~~~~~~~~~~~g~pdG~~vD~~GnlWva~  216 (295)
T d2ghsa1         179 ARTGLPTG---K-AEVFIDSTGIKGGMDGSVCDAEGHIWNAR  216 (295)
T ss_dssp             TTTCCBSS---C-CEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred             cccccccc---c-eEEEeccCcccccccceEEcCCCCEEeee
Confidence            43211100   0 00122223334456677777777766654

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.92  E-value=8.1e-05  Score=55.97  Aligned_cols=95  Identities=14%  Similarity=0.111  Sum_probs=64.2

Q ss_pred             EECCC--CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-C---C--eEEEEec
Q psy15191        184 AFSPD--DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-D---G--VCVVWGL  255 (312)
Q Consensus       184 ~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d---g--~i~iwd~  255 (312)
                      ..+||  |+.++-.+ ++.|.+.|+.+++..+...        +...+...+|||||+.||.... +   .  .|.+++.
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt~--------~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~   75 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIVS--------NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG   75 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEEC--------SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEec--------CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEe
Confidence            45788  99887664 5679999999777654433        5556788999999999886532 2   2  4666676


Q ss_pred             CCCCCCcccccccccceeEEee-------ccCcceeEEEeccCCCeEEEEec
Q psy15191        256 GEPPTEEDLVQNTLWPEVQKLY-------GHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                      ..+.             ...+.       .........+|+|+|+.|+....
T Consensus        76 ~~g~-------------~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  114 (281)
T d1k32a2          76 ENGE-------------IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA  114 (281)
T ss_dssp             TTTE-------------EEECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred             cCCc-------------eEEeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence            6652             22221       12234567899999999887644

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.89  E-value=0.0031  Score=49.48  Aligned_cols=252  Identities=13%  Similarity=-0.024  Sum_probs=120.7

Q ss_pred             EEeCCCCceE--EEE-ccccCcEEEEEEecCcCcCCCCceEEEecCC-CcEEEeeecCCccccccccc---------CCC
Q psy15191         31 KWNGEGGKVL--YTL-TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-KTAILWKYVSEGNYLPYHMR---------DDS   97 (312)
Q Consensus        31 ~w~~~~~~~~--~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-g~i~vw~~~~~~~~~~~~~~---------~~~   97 (312)
                      .||+.+++-.  ... ..|........+.++      +++++.|+.+ ..+.+||..+.........+         ...
T Consensus        56 ~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~------g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~  129 (387)
T d1k3ia3          56 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGN------GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS  129 (387)
T ss_dssp             EECTTTCCBCCCEEEECSCCCSSCEEEECTT------SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT
T ss_pred             EEECCCCcEeecCCCCCCcccceeEEEEecC------CcEEEeecCCCcceeEecCccCcccccccccccccccceeeec
Confidence            4888876432  112 223333345567677      8899988765 58999998876542211111         123


Q ss_pred             CCceEEEEeCC------CcEEEEcCCCCcceeeeeeeeccc--CCCcc-----ceeEEEECCCCCeEEEeecCCeEEE-e
Q psy15191         98 KQLHLLSCSMD------KSIIVWAPDPTTGLWLETARVGEV--GGNTL-----GFYGCKFGPRGDYIIAHGFQGSLHL-D  163 (312)
Q Consensus        98 ~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~--~~~~~-----~v~~~~~~~~~~~l~~~~~~~~i~~-d  163 (312)
                      ++..++.++.+      ..+.+||..+.+-..+........  ..+..     .-..+...++++.+..+...+.+.. +
T Consensus       130 dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~  209 (387)
T d1k3ia3         130 DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT  209 (387)
T ss_dssp             TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred             CCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecC
Confidence            55677776643      358889988743222111111000  00000     0111233456676766666666666 5


Q ss_pred             cccCceeeee--c----ccCC--ceeEEEE-CCCCCEEEEEecCC--------eEEEEEccCCCeE-EEEeccCCCCccc
Q psy15191        164 VTTWKQIQTL--P----CHQL--TITQLAF-SPDDTHLVSVSRDR--------RWGLYKRQSSGRL-SLVACSDKTNGVH  225 (312)
Q Consensus       164 ~~~~~~~~~~--~----~~~~--~v~~~~~-~~~~~~l~~~~~d~--------~i~~wd~~~~~~~-~~~~~~~~~~~~~  225 (312)
                      ..++......  .    .+..  .-.++.+ ..+++.++.|+...        ...+.+....... ..........  .
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~  287 (387)
T d1k3ia3         210 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY--F  287 (387)
T ss_dssp             STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS--S
T ss_pred             cccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccc--c
Confidence            5544432221  1    0111  1112222 23666777766431        2334443322111 1111110000  1


Q ss_pred             ceeeEEEEEcCCCceEEEeccCC-----------eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191        226 KRIIWGVAWSHDSRYFLTISRDG-----------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL  294 (312)
Q Consensus       226 ~~~v~~~~~~~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  294 (312)
                      ...-.+.+..+++++++.|+.++           .+.+||..+.          .|..+..+......=......+||+.
T Consensus       288 ~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~----------~W~~~~~~~~~R~~Hs~a~l~~dG~v  357 (387)
T d1k3ia3         288 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD----------TFYKQNPNSIVRVYHSISLLLPDGRV  357 (387)
T ss_dssp             CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT----------EEEECCCCSSCCCTTEEEEECTTSCE
T ss_pred             ccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCC----------eEEECCCCCCcccceEEEEECCCCEE
Confidence            11122455568999999988542           4678886554          23333322211111112335799999


Q ss_pred             EEEEec
Q psy15191        295 LASACK  300 (312)
Q Consensus       295 l~s~s~  300 (312)
                      |+.|+.
T Consensus       358 ~v~GG~  363 (387)
T d1k3ia3         358 FNGGGG  363 (387)
T ss_dssp             EEEECC
T ss_pred             EEEeCC
Confidence            999985

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.82  E-value=0.0041  Score=48.77  Aligned_cols=153  Identities=11%  Similarity=0.091  Sum_probs=88.0

Q ss_pred             CCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC--CCCCeEEEeecCCe---------------
Q psy15191         98 KQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG--PRGDYIIAHGFQGS---------------  159 (312)
Q Consensus        98 ~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~---------------  159 (312)
                      +|.++++.. .+.+|-+.|+++.+...+...+      ....+..++..  |+..+++..+....               
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iP------n~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y  171 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP------NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY  171 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECS------SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-E
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecC------CCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhc
Confidence            555665554 6678999999885543333322      23345556654  45556666555321               


Q ss_pred             ---EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC---------------eEEEEEccC------------
Q psy15191        160 ---LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR---------------RWGLYKRQS------------  208 (312)
Q Consensus       160 ---i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~~wd~~~------------  208 (312)
                         +.. |..+.+...... -.+....+.++++|+++++.+.+.               .+.+++...            
T Consensus       172 ~~~~t~ID~~tm~V~~QV~-V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~e  250 (459)
T d1fwxa2         172 VNVFTAVDADKWEVAWQVL-VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  250 (459)
T ss_dssp             EEEEEEEETTTTEEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             ceEEEEEecCCceEEEEee-eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEE
Confidence               222 777777666555 334567899999999998876441               134444321            


Q ss_pred             CCeEEEEeccCCC---C---cccceeeEEEEEcCCCceEEEec-cCCeEEEEecCC
Q psy15191        209 SGRLSLVACSDKT---N---GVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGE  257 (312)
Q Consensus       209 ~~~~~~~~~~~~~---~---~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~  257 (312)
                      ......+......   .   ..-......+..+|||+++++++ .+.++.|+|++.
T Consensus       251 ingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K  306 (459)
T d1fwxa2         251 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR  306 (459)
T ss_dssp             ETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred             eCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence            0011111111100   0   00223355789999999987665 688999999863

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.78  E-value=0.0016  Score=51.07  Aligned_cols=223  Identities=11%  Similarity=0.064  Sum_probs=122.0

Q ss_pred             CCceEEEec-CCCcEEEeeecCCcccccccccC-----------CCCCceEEEEeCCC------------------cEEE
Q psy15191         64 EHKDLVSCS-LDKTAILWKYVSEGNYLPYHMRD-----------DSKQLHLLSCSMDK------------------SIIV  113 (312)
Q Consensus        64 ~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~d~------------------~i~i  113 (312)
                      ||++|+... .+.+|.+-|+++.+...+...+.           .++..+++..+.+.                  .+.+
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            478876665 67889999998877643332221           33444666655532                  2456


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe----------------------------------
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS----------------------------------  159 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~----------------------------------  159 (312)
                      .|..+.+..  .+...      ......+.++++|+++++.+.+..                                  
T Consensus       178 ID~~tm~V~--~QV~V------~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~  249 (459)
T d1fwxa2         178 VDADKWEVA--WQVLV------SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ  249 (459)
T ss_dssp             EETTTTEEE--EEEEE------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred             EecCCceEE--EEeee------CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcE
Confidence            677663322  22221      123557899999999888764311                                  


Q ss_pred             ----EEE-ecccC---ceeeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEE--------EEeccCCCC
Q psy15191        160 ----LHL-DVTTW---KQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLS--------LVACSDKTN  222 (312)
Q Consensus       160 ----i~~-d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~--------~~~~~~~~~  222 (312)
                          +.+ |.++-   .....+. -......+.++|||+++++++ .+.++.++|++......        .+.....  
T Consensus       250 eingV~VVD~~~~~~~~v~~yIP-VpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e--  326 (459)
T d1fwxa2         250 ELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--  326 (459)
T ss_dssp             EETTEEEEECSGG--CSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB--
T ss_pred             EeCCceeecccccCCcceeEEEe-cCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecc--
Confidence                111 21110   0111111 123345789999999987765 68999999997522110        0000000  


Q ss_pred             cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-----ccCcceeEEEeccCCCeEEE
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-----GHGYEIYSLAASHDGTLLAS  297 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s  297 (312)
                        ..-....-+|+.+|....+---|..|.-|++......  ......++.+..+.     ||.....+-...|+|++|++
T Consensus       327 --lglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~--~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~  402 (459)
T d1fwxa2         327 --LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRA--YAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC  402 (459)
T ss_dssp             --CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHH--HHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred             --cCcCccccccCCCceEEEEeeccceEEEEecchhhhh--hccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEE
Confidence              2223445688888876666778999999998532000  00001112344443     33322222245789999998


Q ss_pred             EecC
Q psy15191        298 ACKA  301 (312)
Q Consensus       298 ~s~d  301 (312)
                      ...-
T Consensus       403 ~nk~  406 (459)
T d1fwxa2         403 LSKF  406 (459)
T ss_dssp             EESC
T ss_pred             eccc
Confidence            8643

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.65  E-value=0.0056  Score=45.36  Aligned_cols=49  Identities=2%  Similarity=0.033  Sum_probs=33.8

Q ss_pred             eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC----C--CcEEEeeecCCccc
Q psy15191         33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL----D--KTAILWKYVSEGNY   88 (312)
Q Consensus        33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----d--g~i~vw~~~~~~~~   88 (312)
                      +.++++. +.|..+...+...+|+|+      |+.||-...    +  ..|.+.+..+++..
T Consensus        27 d~~~g~~-~~Lt~~~~~~~~p~~SPD------G~~iaf~~~~~~~~~~~~i~~~~~~~g~~~   81 (281)
T d1k32a2          27 DLKSGST-RKIVSNLGVINNARFFPD------GRKIAIRVMRGSSLNTADLYFYNGENGEIK   81 (281)
T ss_dssp             ETTTCCE-EEEECSSSEEEEEEECTT------SSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred             ECCCCCE-EEEecCCCcccCEEECCC------CCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence            6676665 566767788999999999      998875432    2  23666676666653

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.00  E-value=0.027  Score=46.70  Aligned_cols=210  Identities=7%  Similarity=-0.086  Sum_probs=97.2

Q ss_pred             EEEeCCCCceEEEEccccCcEEE---------EEEecCcCcCCCC-ceEEEecCCCcEEEeeecCCcccccccccCCCCC
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKVMA---------VKWVLNTSLDPEH-KDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQ   99 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v~~---------~~~~~~~~~~~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~   99 (312)
                      ++.+.++|+.+..++.+...++.         .....+    ... ..++.++.+|.+.+.|..+++.+...  ...+..
T Consensus       275 vAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~----g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~--~~~~~~  348 (571)
T d2ad6a1         275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVN----GKMTPLLSHIDRNGILYTLNRENGNLIVAE--KVDPAV  348 (571)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEET----TEEEEEEEEECTTSEEEEEETTTCCEEEEE--ESSTTC
T ss_pred             eeeeccchhheecccccCccccccccccccceeeeecc----CccccceeeccccceEEEEecCCCcEeeee--ccCCcc
Confidence            45678888888877753332221         111122    101 24677888999999999888864211  111111


Q ss_pred             ceEEEEeCCCcEEEEcCCCCcce-eeee-eeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccC
Q psy15191        100 LHLLSCSMDKSIIVWAPDPTTGL-WLET-ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQ  177 (312)
Q Consensus       100 ~~l~~~~~d~~i~i~d~~~~~~~-~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~  177 (312)
                      .............++........ .... .......++.  -...+++|+...+++...+....+........... ...
T Consensus       349 ~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~--w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~-~~~  425 (571)
T d2ad6a1         349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN--QGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQ-FFV  425 (571)
T ss_dssp             CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC--SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS-CCC
T ss_pred             cccccccccccccccCcccccccccCceEEEeccccccc--cccceECCCCceEEEeccccccccccccccccCCc-ccc
Confidence            11111111111122211100000 0000 0000111121  12367889888888877665555411110000000 000


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                      .....+.-.|..   ......|.|.-+|+.+++..-........   ..+.     +.-.+.+++.|+.||.++.+|.++
T Consensus       426 ~~~~~~~~~~~~---~~~~~~G~l~AiD~~TG~~~W~~~~~~~~---~~g~-----l~TagglVf~G~~dg~l~A~Da~t  494 (571)
T d2ad6a1         426 GATLAMYPGPNG---PTKKEMGQIRAFDLTTGKAKWTKWEKFAA---WGGT-----LYTKGGLVWYATLDGYLKALDNKD  494 (571)
T ss_dssp             CEEEEEEECTTS---TTSCCCEEEEEECTTTCCEEEEEEESSCC---CSBC-----EEETTTEEEEECTTSEEEEEETTT
T ss_pred             ccceeeccccCC---cccCCcccEEEeccCCCceeeEcCCCCCC---Ccce-----eEecCCEEEEECCCCeEEEEECCC
Confidence            111111111211   11223467888898888877655532111   1111     122456777899999999999999


Q ss_pred             CC
Q psy15191        258 PP  259 (312)
Q Consensus       258 ~~  259 (312)
                      +.
T Consensus       495 Ge  496 (571)
T d2ad6a1         495 GK  496 (571)
T ss_dssp             CC
T ss_pred             Cc
Confidence            83

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.56  E-value=0.032  Score=44.41  Aligned_cols=109  Identities=17%  Similarity=0.134  Sum_probs=66.4

Q ss_pred             cCCceeEEEECCCCCEEEEE-ecC----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC---
Q psy15191        176 HQLTITQLAFSPDDTHLVSV-SRD----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD---  247 (312)
Q Consensus       176 ~~~~v~~~~~~~~~~~l~~~-~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---  247 (312)
                      +.-.+..++++||+++++.+ +.+    ..|+++|+.+++.+...-        .......++|.+|++.|+....+   
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i--------~~~~~~~~~W~~D~~~~~Y~~~~~~~  194 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--------ERVKFSCMAWTHDGKGMFYNAYPQQD  194 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE--------EEECSCCEEECTTSSEEEEEECCCCS
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc--------ccccccceEEcCCCCEEEEEEecccc
Confidence            33345567889999988854 223    359999999887654221        11112468999999987754322   


Q ss_pred             -------------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191        248 -------------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK  300 (312)
Q Consensus       248 -------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~  300 (312)
                                   ..|+.+.+.+......        .+.........+..+..+.++++++....
T Consensus       195 ~~~~~~~~~~~~~~~v~~h~lgt~~~~d~--------~v~~e~d~~~~~~~~~~s~d~~~l~i~~~  252 (430)
T d1qfma1         195 GKSDGTETSTNLHQKLYYHVLGTDQSEDI--------LCAEFPDEPKWMGGAELSDDGRYVLLSIR  252 (430)
T ss_dssp             SCCSSSCCCCCCCCEEEEEETTSCGGGCE--------EEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred             CcccccccccCCcceEEEEECCCCccccc--------cccccccCCceEEeeeccCCcceeeEEee
Confidence                         2677777776533211        22222222334667788999998875544

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.31  E-value=0.18  Score=40.11  Aligned_cols=52  Identities=17%  Similarity=0.199  Sum_probs=34.8

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee--ec------ccCCceeEEEECCC
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT--LP------CHQLTITQLAFSPD  188 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~--~~------~~~~~v~~~~~~~~  188 (312)
                      ...++|+|.|+++++++--..|.|++ +..+.+....  +.      .-......|+++|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            45789999999997776545788877 5555443221  11      22356789999994

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.19  E-value=0.17  Score=39.05  Aligned_cols=142  Identities=10%  Similarity=0.034  Sum_probs=76.5

Q ss_pred             EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-CeEEE-ecc--cCceeeeecccCCceeEEEEC
Q psy15191        111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-GSLHL-DVT--TWKQIQTLPCHQLTITQLAFS  186 (312)
Q Consensus       111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~  186 (312)
                      +.+||+.+.+-.......    ..+.......++.++++.++.|+.+ ..+.+ |..  +|......... ..-..++..
T Consensus        54 ~~~yd~~t~~w~~~~~~~----~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~-r~~~~~~~~  128 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTV----TKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATM  128 (387)
T ss_dssp             EEEECTTTCCBCCCEEEE----CSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEEC
T ss_pred             EEEEECCCCcEeecCCCC----CCcccceeEEEEecCCcEEEeecCCCcceeEecCccCccccccccccc-ccccceeee
Confidence            668998875432211111    1222223456788999999988765 45666 544  34433333322 223456777


Q ss_pred             CCCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCcc---cc-----eeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191        187 PDDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNGV---HK-----RIIWGVAWSHDSRYFLTISRDGVCVV  252 (312)
Q Consensus       187 ~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~---~~-----~~v~~~~~~~~~~~l~s~~~dg~i~i  252 (312)
                      +||+.++.++.+      ..+.+||..+.+- ..+.........   +.     ..-..+...++|+.++.+...+.+.+
T Consensus       129 ~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~  207 (387)
T d1k3ia3         129 SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW-TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY  207 (387)
T ss_dssp             TTSCEEEECCCCCSSSCCCCEEEEETTTTEE-EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred             cCCceeeeccccccccccceeeeecCCCCce-eecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEe
Confidence            899999988753      3589999886542 222111100000   00     00111223456777777777777777


Q ss_pred             EecCCC
Q psy15191        253 WGLGEP  258 (312)
Q Consensus       253 wd~~~~  258 (312)
                      ++....
T Consensus       208 ~~~~~~  213 (387)
T d1k3ia3         208 YTSGSG  213 (387)
T ss_dssp             ECSTTC
T ss_pred             cCcccC
Confidence            766554

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.15  E-value=0.18  Score=38.54  Aligned_cols=192  Identities=12%  Similarity=0.178  Sum_probs=100.3

Q ss_pred             CCCceEEEecCCCcEEEeeecCCccccc----------cc-ccCCCCCceEEEEe-CC---CcEEEEcCCCCcceeeeee
Q psy15191         63 PEHKDLVSCSLDKTAILWKYVSEGNYLP----------YH-MRDDSKQLHLLSCS-MD---KSIIVWAPDPTTGLWLETA  127 (312)
Q Consensus        63 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~----------~~-~~~~~~~~~l~~~~-~d---~~i~i~d~~~~~~~~~~~~  127 (312)
                      |+..+++...+++-|.+||++..+....          .. .........++.++ ++   ..|.+|.+....... ...
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~G~~l~~~~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l-~~~  116 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLEGKMLHSYHTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL-QSI  116 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETTCCEEEECCSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE-EEC
T ss_pred             cCccEEEEEcCcCCEEEEcCCCcEEEecccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc-ccc
Confidence            4456777777777799999864433111          10 00111222244444 22   257778775432221 111


Q ss_pred             ee--cccCCCccceeEEEE--CCC-CC-eEEEeecCCeEEE----ecccC----ceeeeecccCCceeEEEECCCCCEEE
Q psy15191        128 RV--GEVGGNTLGFYGCKF--GPR-GD-YIIAHGFQGSLHL----DVTTW----KQIQTLPCHQLTITQLAFSPDDTHLV  193 (312)
Q Consensus       128 ~~--~~~~~~~~~v~~~~~--~~~-~~-~l~~~~~~~~i~~----d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~  193 (312)
                      ..  .........++.+|+  ++. +. ++++...+|.+..    .....    ++++.+. -...+..+.+......|+
T Consensus       117 ~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~Ly  195 (353)
T d1h6la_         117 TDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGSLY  195 (353)
T ss_dssp             SCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTEEE
T ss_pred             cccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCcEE
Confidence            10  011112234677777  664 44 3556667887665    11222    2233333 456788999999888999


Q ss_pred             EEecCCeEEEEEccCC--CeEEEEeccCCCCcccceeeEEEEEcC--CCc-eE-EEeccCCeEEEEecCCC
Q psy15191        194 SVSRDRRWGLYKRQSS--GRLSLVACSDKTNGVHKRIIWGVAWSH--DSR-YF-LTISRDGVCVVWGLGEP  258 (312)
Q Consensus       194 ~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~-~l-~s~~~dg~i~iwd~~~~  258 (312)
                      .+-++..|..+++...  .....+......  .....+..++.-.  ++. || +|.-.+++..|||...+
T Consensus       196 isEE~~Giw~~~a~~~~~~~~~~i~~~~g~--~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~  264 (353)
T d1h6la_         196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGR--HLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ  264 (353)
T ss_dssp             EEETTTEEEEEESSTTSCSCCEEEEECSSS--SCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred             EecCccceEEEEeccCCCccceeeecccCc--cccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            9988877777766522  112222111111  1344566666532  322 44 45556789999998764

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.08  E-value=0.3  Score=40.42  Aligned_cols=210  Identities=7%  Similarity=-0.015  Sum_probs=97.3

Q ss_pred             EEEeCCCCceEEEEccccCcEE---------EEEEecCcCcCCCC---ceEEEecCCCcEEEeeecCCcccccccccCCC
Q psy15191         30 VKWNGEGGKVLYTLTNHKSKVM---------AVKWVLNTSLDPEH---KDLVSCSLDKTAILWKYVSEGNYLPYHMRDDS   97 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~v~---------~~~~~~~~~~~~~~---~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~   97 (312)
                      ++.++++|+.+..++.....++         -+.. +.    .+|   +.++.+..+|.+.++|..+++.+.........
T Consensus       281 vAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~-~~----~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~  355 (596)
T d1w6sa_         281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQ-KD----KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTV  355 (596)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEE-EC----TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccccccccceeccccCCccccceeeeec-cc----cccccccceeccccccceeeecCCCCceeeeccccccc
Confidence            5578899999887764322211         1111 11    112   36788889999999999998864322111110


Q ss_pred             CCceEEEEe-CCCcEEEEcCCCCcc--eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeec
Q psy15191         98 KQLHLLSCS-MDKSIIVWAPDPTTG--LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLP  174 (312)
Q Consensus        98 ~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~  174 (312)
                         ..+.+. ....--+++.+....  ............++.  -..++++|+..+++....+....+........... 
T Consensus       356 ---~~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~n--w~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~-  429 (596)
T d1w6sa_         356 ---NVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHN--QGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQ-  429 (596)
T ss_dssp             ---CSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSC--SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS-
T ss_pred             ---cccccccccccccccCccccccCCccceeEecccccccc--cCccccCCCCceEEecccccccccccccccccccc-
Confidence               011111 011111221110000  000000001111111  23468888888887776654443311000000000 


Q ss_pred             ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191        175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG  254 (312)
Q Consensus       175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  254 (312)
                      ...+.-......|.+.... --.-|.|.-||+.+++..-......        ++.+-.++-.+.+++.|+.||.++.+|
T Consensus       430 ~~~g~~~~~~~~~~g~~~~-~~~~G~l~A~D~~TG~~~W~~~~~~--------~~~gg~lsTagglVF~G~~Dg~l~A~D  500 (596)
T d1w6sa_         430 FFVGATLNMYPGPKGDRQN-YEGLGQIKAYNAITGDYKWEKMERF--------AVWGGTMATAGDLVFYGTLDGYLKARD  500 (596)
T ss_dssp             CCCCEEEEEEECTTSBTTT-TBCCEEEEEECTTTCCEEEEEEESS--------CCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred             cccccccccccCcccCccc-CCCcceEEEEeCCCCceecccCCCC--------CCccceeEecCCEEEEECCCCeEEEEE
Confidence            0011111222233321100 0112678888888887765544221        111112223567788899999999999


Q ss_pred             cCCCC
Q psy15191        255 LGEPP  259 (312)
Q Consensus       255 ~~~~~  259 (312)
                      ..++.
T Consensus       501 a~TGe  505 (596)
T d1w6sa_         501 SDTGD  505 (596)
T ss_dssp             TTTCC
T ss_pred             CCCCc
Confidence            99983

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.65  E-value=0.25  Score=36.09  Aligned_cols=195  Identities=10%  Similarity=-0.026  Sum_probs=107.9

Q ss_pred             EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc--------cccCCC-CCceEEEEeCCCcEEE
Q psy15191         43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY--------HMRDDS-KQLHLLSCSMDKSIIV  113 (312)
Q Consensus        43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--------~~~~~~-~~~~l~~~~~d~~i~i  113 (312)
                      +..+...+..++|.+.     ++..+.+-..++.|+..+++......+.        .++... .+.+..+-...+.|.+
T Consensus        31 ~~~~~~~~~~ld~D~~-----~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~  105 (263)
T d1npea_          31 LHIPAKVIIGLAFDCV-----DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEV  105 (263)
T ss_dssp             EEEEEEEEEEEEEETT-----TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cccCCCcEEEEEEEeC-----CCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEE
Confidence            4444456778888776     1334444456677888777655442111        111111 2223334445567777


Q ss_pred             EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC---CeEEE-ecccCceeeeecccCCceeEEEECCCC
Q psy15191        114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ---GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDD  189 (312)
Q Consensus       114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~  189 (312)
                      .++.......+..       .....+..++++|...+++.....   ..|.- ++..-.........-.....|++++.+
T Consensus       106 ~~~dg~~~~~l~~-------~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~  178 (263)
T d1npea_         106 AKMDGTQRRVLFD-------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFS  178 (263)
T ss_dssp             EETTSCSCEEEEC-------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTT
T ss_pred             EecCCceEEEEec-------ccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecC
Confidence            7776533222111       223457889999977776654322   23433 444332222222233456789999877


Q ss_pred             CEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        190 THLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       190 ~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      +.|+-+ ...+.|...|+........+...        ....++++. ++.+..+-...+.|...|...+
T Consensus       179 ~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~--------~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g  239 (263)
T d1npea_         179 SQLCWVDAGTHRAECLNPAQPGRRKVLEGL--------QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS  239 (263)
T ss_dssp             TEEEEEETTTTEEEEEETTEEEEEEEEECC--------CSEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred             cEEEEEeCCCCEEEEEECCCCCeEEEECCC--------CCcEEEEEE-CCEEEEEECCCCEEEEEECCCC
Confidence            777555 45688999998765444443321        123467775 4444455556778888888765

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.59  E-value=0.47  Score=38.89  Aligned_cols=50  Identities=8%  Similarity=0.070  Sum_probs=34.8

Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEE
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLT  243 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s  243 (312)
                      .+.++++++.||.++.+|.++++.+-.+......   +..+   +.+..+|+ ||+.
T Consensus       468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~---~~~P---~ty~~dGkqyv~v  518 (560)
T d1kv9a2         468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGI---VAAP---MTFELAGRQYVAI  518 (560)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC---CSCC---EEEEETTEEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCc---cccC---EEEEECCEEEEEE
Confidence            4567888999999999999999999877754321   2222   34455775 5544

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.55  E-value=0.29  Score=36.21  Aligned_cols=189  Identities=10%  Similarity=0.083  Sum_probs=108.0

Q ss_pred             CceEEEecCCCcEEEeeecCCccccc-------ccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191         65 HKDLVSCSLDKTAILWKYVSEGNYLP-------YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL  137 (312)
Q Consensus        65 ~~~l~s~~~dg~i~vw~~~~~~~~~~-------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~  137 (312)
                      .+.||.=+ ..+++++|+++.+.+..       .+-.|-.+. .|+..+ +..|+-|+++... ...+.+....-. ...
T Consensus        74 ~~IiALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~-~L~lVT-~taVYHW~~~g~s-~P~k~fdR~~~L-~~~  148 (327)
T d1utca2          74 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMFDRHSSL-AGC  148 (327)
T ss_dssp             SSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEESSSS-EEEEEC-SSEEEEEESSSSC-CCEEEEECCGGG-TTC
T ss_pred             CcEEEEec-CCeEEEEehhHhhhhceEEcCCCcEEEEecCCC-EEEEEc-CCceEEEcccCCC-Cchhhhhhcccc-cCc
Confidence            66676555 45899999999887432       222222222 333333 3569999996533 222222221111 245


Q ss_pred             ceeEEEECCCCCeEEEee---cCC----eEEEecccCceeeeecccCCceeEEEECCCC---CEEEEEe---cCCeEEEE
Q psy15191        138 GFYGCKFGPRGDYIIAHG---FQG----SLHLDVTTWKQIQTLPCHQLTITQLAFSPDD---THLVSVS---RDRRWGLY  204 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~---~~~----~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~---~d~~i~~w  204 (312)
                      .|..-..+++.++++..+   .++    .+.+-....+..+.+++|......+.+..+.   +.|+.+.   ..+.+++-
T Consensus       149 QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIi  228 (327)
T d1utca2         149 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII  228 (327)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEE
T ss_pred             eEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEE
Confidence            677788899999977543   333    3444223344455566777666666554322   2333332   23678888


Q ss_pred             EccCCCe------EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        205 KRQSSGR------LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       205 d~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      ++.....      .......-... .......++..++....+..-+.-|.|++||++++.
T Consensus       229 Eig~~~~g~~~f~kk~vdi~fppe-a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt  288 (327)
T d1utca2         229 EVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  288 (327)
T ss_dssp             ECSCCCTTCCCCCCEEEECCCCTT-CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred             EcCCCccCCCCCcceeEEEECCcc-ccCCcEEEEEeeccCCEEEEEecCcEEEEEEccccc
Confidence            8765211      11111111111 134456678888888888889999999999999985

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.53  E-value=0.22  Score=39.61  Aligned_cols=60  Identities=13%  Similarity=0.143  Sum_probs=41.0

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-cccceeeEEEEEcCC
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-GVHKRIIWGVAWSHD  237 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~  237 (312)
                      ...++|+|.||+++|++--..|.|++++..+.............. ..-......++++|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            456799999999988876557999999877665544333322211 113456789999985

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=95.33  E-value=0.59  Score=38.42  Aligned_cols=50  Identities=14%  Similarity=0.135  Sum_probs=35.0

Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEE
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLT  243 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s  243 (312)
                      .+.++++++.||.++.+|.++++.+-.+......   ...+   +.|..+|+ |++.
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~---~~~P---~ty~~~GkQYv~v  537 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV---VAAP---STYMVDGRQYVSV  537 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC---CSCC---EEEEETTEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCc---cccC---EEEEECCEEEEEE
Confidence            5678888999999999999999999887754321   2233   34445776 4443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.29  E-value=0.61  Score=38.38  Aligned_cols=74  Identities=14%  Similarity=0.171  Sum_probs=45.1

Q ss_pred             ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eE
Q psy15191        163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YF  241 (312)
Q Consensus       163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l  241 (312)
                      |+.+.+++-....+ .++..-.++..+.++++++.||.++.+|.++++.+-.+......   +..+   +.+..+|+ |+
T Consensus       472 D~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~---~~~P---~ty~~~G~qYv  544 (582)
T d1flga_         472 DPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI---VSPP---ITWEQDGEQYL  544 (582)
T ss_dssp             CTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC---CSCC---EEEEETTEEEE
T ss_pred             cCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCc---cccC---EEEEECCEEEE
Confidence            55555555444421 12221112235678888999999999999999999887754322   2222   45666885 55


Q ss_pred             EE
Q psy15191        242 LT  243 (312)
Q Consensus       242 ~s  243 (312)
                      +.
T Consensus       545 ~i  546 (582)
T d1flga_         545 GV  546 (582)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.20  E-value=0.47  Score=36.57  Aligned_cols=143  Identities=13%  Similarity=0.060  Sum_probs=79.7

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC  217 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  217 (312)
                      .|..++|+.+  .+++...++...++..+.........-..++..+.++|.  .++....++.+.++++...+.......
T Consensus        88 ~v~~vafs~d--~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~  163 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQN  163 (381)
T ss_dssp             TEEEEEEETT--EEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEES
T ss_pred             CeEEEEeeCC--EEEEEeCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCC
Confidence            4778888644  455544433333344443333333334566788888774  567777899999999988765444332


Q ss_pred             cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE-ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEE
Q psy15191        218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW-GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLA  296 (312)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  296 (312)
                      .....  -...+.+++|++.|..++++..++ ..+- ++....            .+.........|.++.|-.+..+++
T Consensus       164 v~~~~--~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~------------~~~~p~~~~~~v~sI~WL~~~~F~v  228 (381)
T d1xipa_         164 VTSFD--VTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPS------------ELEELPVEEYSPLSVTILSPQDFLA  228 (381)
T ss_dssp             EEEEE--ECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCH------------HHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred             cceEE--ecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCcc------------ccCCCcCCCcceeEEEEecCceEEE
Confidence            11100  234577888888888887763322 2221 222110            0100011234678889987777776


Q ss_pred             EEe
Q psy15191        297 SAC  299 (312)
Q Consensus       297 s~s  299 (312)
                      +-+
T Consensus       229 vy~  231 (381)
T d1xipa_         229 VFG  231 (381)
T ss_dssp             EEE
T ss_pred             EEC
Confidence            554

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.63  E-value=0.64  Score=35.27  Aligned_cols=73  Identities=8%  Similarity=-0.023  Sum_probs=47.0

Q ss_pred             CceeEEEECCCCCEEEEEe--c-C------------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE
Q psy15191        178 LTITQLAFSPDDTHLVSVS--R-D------------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL  242 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~--~-d------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  242 (312)
                      ...+++++..++.+++|-.  . +            +.-.+|............        .-...+.++++|++++|+
T Consensus       150 ~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~--------~l~~pNGI~~s~d~~~ly  221 (340)
T d1v04a_         150 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE--------GFDFANGINISPDGKYVY  221 (340)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEE--------EESSEEEEEECTTSSEEE
T ss_pred             cCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcC--------CCCccceeEECCCCCEEE
Confidence            4578899888898888731  1 1            233444444433322222        334578899999998765


Q ss_pred             Ee-ccCCeEEEEecCCC
Q psy15191        243 TI-SRDGVCVVWGLGEP  258 (312)
Q Consensus       243 s~-~~dg~i~iwd~~~~  258 (312)
                      .+ +..+.|++|++...
T Consensus       222 Va~t~~~~i~~y~~~~~  238 (340)
T d1v04a_         222 IAELLAHKIHVYEKHAN  238 (340)
T ss_dssp             EEEGGGTEEEEEEECTT
T ss_pred             EEeCCCCeEEEEEeCCC
Confidence            44 56789999998754

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.56  E-value=0.79  Score=36.00  Aligned_cols=116  Identities=18%  Similarity=0.242  Sum_probs=68.6

Q ss_pred             ccceeEEEECCCCCeEEEee-cCC----eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-----------
Q psy15191        136 TLGFYGCKFGPRGDYIIAHG-FQG----SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-----------  198 (312)
Q Consensus       136 ~~~v~~~~~~~~~~~l~~~~-~~~----~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------  198 (312)
                      ...+..++++|++++++.+- .+|    .+++ |+.+.+.+.... .......++|.+|++.|+....+           
T Consensus       124 ~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~  202 (430)
T d1qfma1         124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET  202 (430)
T ss_dssp             CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred             cceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-ccccccceEEcCCCCEEEEEEeccccCccccccc
Confidence            33455678899999988543 233    4666 999888765332 11223578999999988765433           


Q ss_pred             -----CeEEEEEccCCCeE--EEEeccCCCCcccceeeEEEEEcCCCceEEEecc---CCe--EEEEecCC
Q psy15191        199 -----RRWGLYKRQSSGRL--SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR---DGV--CVVWGLGE  257 (312)
Q Consensus       199 -----~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~--i~iwd~~~  257 (312)
                           ..+..+.+.+....  ..+....     ....+..+..++++++++....   +..  +.+.|+..
T Consensus       203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d-----~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~  268 (430)
T d1qfma1         203 STNLHQKLYYHVLGTDQSEDILCAEFPD-----EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ  268 (430)
T ss_dssp             CCCCCCEEEEEETTSCGGGCEEEECCTT-----CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred             ccCCcceEEEEECCCCcccccccccccc-----CCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCC
Confidence                 25777777664332  2222111     2234567788999998764322   333  44455544

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.32  E-value=0.58  Score=38.55  Aligned_cols=53  Identities=9%  Similarity=-0.001  Sum_probs=36.2

Q ss_pred             CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191        199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      |.|.-+|+.+++..-......        ++.+-.++-.+.++++|+.||.++.+|.+++.
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~--------p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe  518 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL--------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK  518 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS--------CCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             CeEEEEcCCCCcEEeecCCCC--------CCccceeEEcCCeEEEeCCCCeEEEEECCCCc
Confidence            667778888877766555322        11111223366788889999999999999993

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=94.06  E-value=1.1  Score=36.61  Aligned_cols=23  Identities=13%  Similarity=0.131  Sum_probs=20.2

Q ss_pred             CCceEEEeccCCeEEEEecCCCC
Q psy15191        237 DSRYFLTISRDGVCVVWGLGEPP  259 (312)
Q Consensus       237 ~~~~l~s~~~dg~i~iwd~~~~~  259 (312)
                      .+.++++|+.||.++.+|.+++.
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe  509 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGE  509 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCC
T ss_pred             cCCEEEEECCCCeEEEEECCCCc
Confidence            56788889999999999999993

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.69  E-value=1.5  Score=35.91  Aligned_cols=187  Identities=9%  Similarity=-0.009  Sum_probs=98.9

Q ss_pred             EEEeccCCCceEEEEEeC-CCCceEEEEccccC----cE-------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecC
Q psy15191         17 LYTLTNHKSKVMAVKWNG-EGGKVLYTLTNHKS----KV-------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS   84 (312)
Q Consensus        17 ~~~~~~h~~~v~~~~w~~-~~~~~~~~~~~h~~----~v-------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~   84 (312)
                      ++....+.+.|.++  +. ++|+.+.+++....    ..       ..+++.        +..++.++.||.+.--|.++
T Consensus        65 vyv~t~~~~~v~Al--da~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--------~~~i~~~~~~g~l~alda~t  134 (571)
T d2ad6a1          65 MYVHSAFPNNTYAL--NLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--------AGQIVKKQANGHLLALDAKT  134 (571)
T ss_dssp             EEEECSTTTCEEEE--ETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--------TTEEEEECTTSEEEEEETTT
T ss_pred             EEEecCCCCeEEEE--eCCCCCceEEEecCCCCcccccccccCcCCCcceee--------CCeEEEEeCCCcEEeeehhh
Confidence            34444455566444  55 56888888752110    00       122332        23566677788887778877


Q ss_pred             Ccccc------------cccccCCCCCceEEEEe------CCCcEEEEcCCCCcceeeeeeeeccc--------------
Q psy15191         85 EGNYL------------PYHMRDDSKQLHLLSCS------MDKSIIVWAPDPTTGLWLETARVGEV--------------  132 (312)
Q Consensus        85 ~~~~~------------~~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~--------------  132 (312)
                      ++..-            +...+.-.+ ..++.+.      ..|.|.-+|..+++..+.........              
T Consensus       135 G~~~w~~~~~~~~~~~~~t~~p~v~~-~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~  213 (571)
T d2ad6a1         135 GKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPH  213 (571)
T ss_dssp             CCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred             hhhhccccccccccccceeecCeEeC-CeEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccc
Confidence            76521            011111112 2444444      36789999999988776543211000              


Q ss_pred             ----------------CCCccce-eEEEECCCCCeEEEeec-----------------CCeEEEecccCceeeeecccCC
Q psy15191        133 ----------------GGNTLGF-YGCKFGPRGDYIIAHGF-----------------QGSLHLDVTTWKQIQTLPCHQL  178 (312)
Q Consensus       133 ----------------~~~~~~v-~~~~~~~~~~~l~~~~~-----------------~~~i~~d~~~~~~~~~~~~~~~  178 (312)
                                      ......+ ...++.++...++.+..                 +..+-+|.++++++-.++....
T Consensus       214 ~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~  293 (571)
T d2ad6a1         214 YGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH  293 (571)
T ss_dssp             GCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred             cCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCc
Confidence                            0000111 23455666665554433                 2224448888888776662211


Q ss_pred             ce---------eEEEECCCCC---EEEEEecCCeEEEEEccCCCeEEE
Q psy15191        179 TI---------TQLAFSPDDT---HLVSVSRDRRWGLYKRQSSGRLSL  214 (312)
Q Consensus       179 ~v---------~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~  214 (312)
                      .+         ....+..+++   .++..+.+|.++++|..+++.+..
T Consensus       294 D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~  341 (571)
T d2ad6a1         294 DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVA  341 (571)
T ss_dssp             CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             cccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeee
Confidence            11         1111222443   466788999999999999887654

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.78  E-value=1.6  Score=33.58  Aligned_cols=143  Identities=6%  Similarity=-0.024  Sum_probs=86.3

Q ss_pred             ceeEEEECCCCCeEEEeecCCeEEE---ecccCc----eeeee--cccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        138 GFYGCKFGPRGDYIIAHGFQGSLHL---DVTTWK----QIQTL--PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       138 ~v~~~~~~~~~~~l~~~~~~~~i~~---d~~~~~----~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      ...-++.++...++++|+.++.+..   +++..-    ....+  +..-..|..++|+.+  .|+. ..++.+..++...
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v-~~~~~l~~~~~~~  114 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLV-STRNALYSLDLEE  114 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEE-EESSEEEEEESSS
T ss_pred             ccceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEE-EeCCCEEEEEeec
Confidence            3556788888778888888775544   332110    00000  111235888999754  4544 3566788888877


Q ss_pred             CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe
Q psy15191        209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA  288 (312)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  288 (312)
                      .........       ...++..+.++|.  .++....+|.+.++++..........      -+..+. -.+.+.+++|
T Consensus       115 l~~~~~~~~-------~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~------~v~~~~-~~~~~~~v~w  178 (381)
T d1xipa_         115 LSEFRTVTS-------FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQ------NVTSFD-VTNSQLAVLL  178 (381)
T ss_dssp             TTCEEEEEE-------CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEE------SEEEEE-ECSSEEEEEE
T ss_pred             ccccccccc-------ccccccceecCCc--eeEEEecCCCEEEEEeccCccccccC------CcceEE-ecCCceEEEE
Confidence            655544443       3345777888775  45666778899999988874211000      001111 1356889999


Q ss_pred             ccCCCeEEEEe
Q psy15191        289 SHDGTLLASAC  299 (312)
Q Consensus       289 s~~~~~l~s~s  299 (312)
                      ++.|..++++.
T Consensus       179 s~kgkq~v~~~  189 (381)
T d1xipa_         179 KDRSFQSFAWR  189 (381)
T ss_dssp             TTSCEEEEEEE
T ss_pred             eCCcEEEEEeC
Confidence            99999998874

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.55  E-value=1.3  Score=32.06  Aligned_cols=140  Identities=9%  Similarity=-0.036  Sum_probs=80.1

Q ss_pred             EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191        105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL-DVTTWKQIQTLPCHQLTITQ  182 (312)
Q Consensus       105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~~~~~~~~~~~~~~~v~~  182 (312)
                      -..++.|+..+++......+.       ......+.++++..-+..|+.+ ...+.|.. ++..................
T Consensus        54 d~~~~~I~~~~l~g~~~~~v~-------~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~  126 (263)
T d1npea_          54 DISEPSIGRASLHGGEPTTII-------RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRG  126 (263)
T ss_dssp             ETTTTEEEEEESSSCCCEEEE-------CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred             ECCCCeEEEEEcccCCcEEEE-------EeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcE
Confidence            344556666666543322111       1122457889998766666544 45567776 65544333323333356889


Q ss_pred             EEECCCCCEEEEEecC---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCC
Q psy15191        183 LAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEP  258 (312)
Q Consensus       183 ~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~  258 (312)
                      ++++|...+++-....   ..|.--++...........       .-....++++++.++.|.-+ ...+.|...++...
T Consensus       127 l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~-------~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~  199 (263)
T d1npea_         127 IVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-------NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP  199 (263)
T ss_dssp             EEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-------TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred             EEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeee-------cccccceEEEeecCcEEEEEeCCCCEEEEEECCCC
Confidence            9999976666544322   2354455654444333322       22346789998877766544 56778888888654

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.39  E-value=1.6  Score=32.90  Aligned_cols=99  Identities=5%  Similarity=0.010  Sum_probs=56.2

Q ss_pred             cceeEEEECCCCCeEEEeec-----------------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE-ec
Q psy15191        137 LGFYGCKFGPRGDYIIAHGF-----------------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV-SR  197 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~-----------------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~  197 (312)
                      ..+.++++..++.++++-..                 .+.+.. |..+.+..  . ..-...+.|+++||+++|+.+ +.
T Consensus       150 ~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~--~-~~l~~pNGI~~s~d~~~lyVa~t~  226 (340)
T d1v04a_         150 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--A-EGFDFANGINISPDGKYVYIAELL  226 (340)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEE--E-EEESSEEEEEECTTSSEEEEEEGG
T ss_pred             cCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEE--c-CCCCccceeEECCCCCEEEEEeCC
Confidence            45678888888877776210                 112222 32222111  1 223457899999999877655 56


Q ss_pred             CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEE
Q psy15191        198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLT  243 (312)
Q Consensus       198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s  243 (312)
                      .+.|+.|++.............     -...+-.+.+.+. |.+.++
T Consensus       227 ~~~i~~y~~~~~~~l~~~~~~~-----l~~~pDNi~~d~~~g~lwva  268 (340)
T d1v04a_         227 AHKIHVYEKHANWTLTPLRVLS-----FDTLVDNISVDPVTGDLWVG  268 (340)
T ss_dssp             GTEEEEEEECTTSCEEEEEEEE-----CSSEEEEEEECTTTCCEEEE
T ss_pred             CCeEEEEEeCCCcccceEEEec-----CCCCCCccEEecCCCEEEEE
Confidence            7889999998655443322211     2334556777764 444444

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.35  E-value=1.4  Score=31.94  Aligned_cols=115  Identities=10%  Similarity=-0.042  Sum_probs=72.5

Q ss_pred             cceeEEEECCCCCeEEEe-ecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cCCeEEEEEccCCCeE
Q psy15191        137 LGFYGCKFGPRGDYIIAH-GFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSGRL  212 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~  212 (312)
                      ..+..+++.+.+..|+.+ ...+.|.+ ++..................++++|...+|+-..  ..+.|.-.++......
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~  156 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  156 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee
Confidence            446778998766666554 45567777 6554443333444456678999998655555433  3456777777655444


Q ss_pred             EEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCC
Q psy15191        213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEP  258 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~  258 (312)
                      .....       .-..++++++++.++.|.-+ ...+.|...++...
T Consensus       157 ~l~~~-------~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~  196 (266)
T d1ijqa1         157 SLVTE-------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  196 (266)
T ss_dssp             EEECS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             ccccc-------ccceeeEEEeeccccEEEEecCCcCEEEEEECCCC
Confidence            43332       22446789999877766555 56778888888654

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.04  E-value=1.5  Score=31.71  Aligned_cols=213  Identities=8%  Similarity=-0.056  Sum_probs=112.5

Q ss_pred             CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCcc------------cccc
Q psy15191         25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGN------------YLPY   91 (312)
Q Consensus        25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~------------~~~~   91 (312)
                      ..|..+  +.++.+....+. ....+..+.|.+.      .+.| .+-..++.|.--++.....            ..+.
T Consensus        10 ~~I~~~--~l~~~~~~~~~~-~~~~~~~id~d~~------~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~   80 (266)
T d1ijqa1          10 HEVRKM--TLDRSEYTSLIP-NLRNVVALDTEVA------SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD   80 (266)
T ss_dssp             SSEEEE--ETTSCCCEEEEC-SCSSEEEEEEETT------TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             CeEEEE--ECCCCcceeeeC-CCCceEEEEEEeC------CCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcc
Confidence            345544  444444333333 3456778888776      4444 4444556666555543211            0111


Q ss_pred             cccCC-CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee--cCCeEEE-ecccC
Q psy15191         92 HMRDD-SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG--FQGSLHL-DVTTW  167 (312)
Q Consensus        92 ~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~-d~~~~  167 (312)
                      -++.. ..+....+-...+.|.+.++.........       ......+..++++|...+|....  ..+.|.- ++..-
T Consensus        81 glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~-------~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs  153 (266)
T d1ijqa1          81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  153 (266)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             eEEEeeccceEEEEecCCCEEEeEecCCceEEEEE-------cCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCC
Confidence            11111 12223444455667888887753322111       12234578899998766665543  2334444 44433


Q ss_pred             ceeeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191        168 KQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR  246 (312)
Q Consensus       168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  246 (312)
                      .........-.....+++++.++.|+-+ ...+.|...++.............     ......++++. ++.++.+-..
T Consensus       154 ~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~-----~~~~p~~lav~-~~~ly~td~~  227 (266)
T d1ijqa1         154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVF-EDKVFWTDII  227 (266)
T ss_dssp             CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEE-TTEEEEEETT
T ss_pred             ceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCC-----cccccEEEEEE-CCEEEEEECC
Confidence            3322222233557889999877766655 556889999987655544444321     12234567776 3455555557


Q ss_pred             CCeEEEEecCCCC
Q psy15191        247 DGVCVVWGLGEPP  259 (312)
Q Consensus       247 dg~i~iwd~~~~~  259 (312)
                      ++.|+..+..++.
T Consensus       228 ~~~I~~~~~~~g~  240 (266)
T d1ijqa1         228 NEAIFSANRLTGS  240 (266)
T ss_dssp             TTEEEEEETTTCC
T ss_pred             CCeEEEEECCCCc
Confidence            7888888776654

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.84  E-value=1.6  Score=31.57  Aligned_cols=64  Identities=11%  Similarity=0.179  Sum_probs=33.0

Q ss_pred             CCCEEEEEecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCC
Q psy15191        188 DDTHLVSVSRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGE  257 (312)
Q Consensus       188 ~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~  257 (312)
                      ++..++.++.+     .....+|..+.+.......+ .    ..... +++. .++++++.|+.++     .|.+||+..
T Consensus       195 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p-~----~r~~~-~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~  267 (288)
T d1zgka1         195 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK-H----RRSAL-GITV-HQGRIYVLGGYDGHTFLDSVECYDPDT  267 (288)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS-S----CCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             eeeEEEecCccccccccceeeeeecceeeecccCcc-C----cccce-EEEE-ECCEEEEEecCCCCeecceEEEEECCC
Confidence            45556665544     34677777654433221111 1    11111 2222 2678888887654     477888776


Q ss_pred             C
Q psy15191        258 P  258 (312)
Q Consensus       258 ~  258 (312)
                      .
T Consensus       268 ~  268 (288)
T d1zgka1         268 D  268 (288)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=91.33  E-value=2.2  Score=32.28  Aligned_cols=145  Identities=10%  Similarity=0.116  Sum_probs=79.8

Q ss_pred             cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE------EECCCCCeEEEeecC--C--eEEE-
Q psy15191         94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC------KFGPRGDYIIAHGFQ--G--SLHL-  162 (312)
Q Consensus        94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~l~~~~~~--~--~i~~-  162 (312)
                      +..|...+++.....+-|.+||+...   .+....       .+.+..+      .+......+++++..  +  .+.+ 
T Consensus        35 ~~~p~~SlI~gTdK~~Gl~vYdL~G~---~l~~~~-------~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~  104 (353)
T d1h6la_          35 PKNPQNSKLITTNKKSGLAVYSLEGK---MLHSYH-------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY  104 (353)
T ss_dssp             SSCGGGCEEEEEETTSCCEEEETTCC---EEEECC-------SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEE
T ss_pred             CCCcCccEEEEEcCcCCEEEEcCCCc---EEEecc-------cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEE
Confidence            34556667888888878999999742   222222       1222222      222233335555421  2  4444 


Q ss_pred             --ecccCceeeeec-------ccCCceeEEEE--CCC-CC-EEEEEecCCeEEEEEccCCC---e----EEEEeccCCCC
Q psy15191        163 --DVTTWKQIQTLP-------CHQLTITQLAF--SPD-DT-HLVSVSRDRRWGLYKRQSSG---R----LSLVACSDKTN  222 (312)
Q Consensus       163 --d~~~~~~~~~~~-------~~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~~wd~~~~~---~----~~~~~~~~~~~  222 (312)
                        +.....+ ..+.       .....+..+|+  +|. +. +++....+|.+..|.+....   .    +..+.      
T Consensus       105 ~id~~~~~l-~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~------  177 (353)
T d1h6la_         105 AIDGKNGTL-QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK------  177 (353)
T ss_dssp             EEETTTTEE-EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE------
T ss_pred             EecCccccc-ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC------
Confidence              3222211 1111       11224667776  664 44 45666778999988774322   1    11222      


Q ss_pred             cccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191        223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE  257 (312)
Q Consensus       223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  257 (312)
                        ....+..+++.+....|..+-++.-|+.++...
T Consensus       178 --~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~  210 (353)
T d1h6la_         178 --MNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEP  210 (353)
T ss_dssp             --CSSCEEEEEEETTTTEEEEEETTTEEEEEESST
T ss_pred             --CCCccceEEEeCCCCcEEEecCccceEEEEecc
Confidence              344577899999988999888877676666543

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.47  E-value=3.7  Score=30.58  Aligned_cols=71  Identities=8%  Similarity=0.004  Sum_probs=45.1

Q ss_pred             CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191        188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP  258 (312)
Q Consensus       188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  258 (312)
                      ...+|+..+..|.++..++........-.+...........+..+....+...++.++..|.+..++...-
T Consensus       105 ~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~v  175 (323)
T d1wp5a_         105 LNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEV  175 (323)
T ss_dssp             SSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGS
T ss_pred             cceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEEEecceeeEeecccc
Confidence            45688889999999999876432111000000001114445666777777778888899999999987653

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=87.68  E-value=6  Score=32.04  Aligned_cols=179  Identities=12%  Similarity=0.056  Sum_probs=92.0

Q ss_pred             EEEeCCCCceEEEEccccCc----------E-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc-------
Q psy15191         30 VKWNGEGGKVLYTLTNHKSK----------V-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY-------   91 (312)
Q Consensus        30 ~~w~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-------   91 (312)
                      ++.|.++|+.+.++......          + ..+...        +..++.+..|+.+.-.|..+++..-..       
T Consensus        79 ~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~  150 (560)
T d1kv9a2          79 IAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--------GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK  150 (560)
T ss_dssp             EEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--------BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS
T ss_pred             EEEeCCCCCEEEEECCCCCccccccccccccccCccee--------CCeEEEEeCCCEEEEEECCCCcEEeccCccCccc
Confidence            44688899998887422110          0 011111        234666667777777776666552110       


Q ss_pred             --cccCCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccC-C----------------------Cccc
Q psy15191         92 --HMRDDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVG-G----------------------NTLG  138 (312)
Q Consensus        92 --~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~-~----------------------~~~~  138 (312)
                        .....+  ....++.+..      .|.|.-+|.++++..+.......... .                      ....
T Consensus       151 ~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  230 (560)
T d1kv9a2         151 PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGT  230 (560)
T ss_dssp             SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECC
T ss_pred             ceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccccCCCC
Confidence              000011  1123444432      36799999999877665432111000 0                      0011


Q ss_pred             e-eEEEECCCCCeEEEeec--------------------CCeEEEecccCceeeeecccCCcee---------EEEECCC
Q psy15191        139 F-YGCKFGPRGDYIIAHGF--------------------QGSLHLDVTTWKQIQTLPCHQLTIT---------QLAFSPD  188 (312)
Q Consensus       139 v-~~~~~~~~~~~l~~~~~--------------------~~~i~~d~~~~~~~~~~~~~~~~v~---------~~~~~~~  188 (312)
                      + ..+++.+...+++.+..                    +..+-+|.++.+++-.++.....+.         -+....+
T Consensus       231 ~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~  310 (560)
T d1kv9a2         231 VWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNID  310 (560)
T ss_dssp             CCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred             cccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeeeeeecC
Confidence            1 22455666666554321                    2233448888887766652221111         1112223


Q ss_pred             C---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        189 D---THLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       189 ~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                      +   ..++.+..+|.++++|..+++.+....
T Consensus       311 g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~  341 (560)
T d1kv9a2         311 GKPRKVLMQAPKNGFFYVLDRTNGKLISAEK  341 (560)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             CceeeeeeecCccceEEEEecCCCccccccc
Confidence            3   356778899999999999988775544

>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}

class: All beta proteins
fold: 5-bladed beta-propeller
superfamily: Tachylectin-2
family: Tachylectin-2
domain: Tachylectin-2
species: Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]

Probab=87.64  E-value=2.9  Score=28.39  Aligned_cols=141  Identities=14%  Similarity=0.051  Sum_probs=73.8

Q ss_pred             cceeEEEECCCCCeEEEeecCCeEEE-eccc-----Cceeeeec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191        137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-----WKQIQTLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS  208 (312)
Q Consensus       137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-----~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~  208 (312)
                      ..+.-++|||+|++.++-  .+.+.. .+.+     |=...+..  +.=+...-+-|+|+|-+.++.  ++  .+|.-..
T Consensus        40 ~n~~~i~fsP~G~LyaVr--~~~lY~Gp~~s~~nq~wf~~atrIG~ggWn~FkflffdP~G~LyaVt--~~--~LYr~~p  113 (235)
T d1tl2a_          40 SNFKFLFLSPGGELYGVL--NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS--KD--KLYKASP  113 (235)
T ss_dssp             TTCSEEEECTTSCEEEEE--TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--TT--EEEEESC
T ss_pred             cceeEEEECCCCcEEEEE--CCeEEECCCCCcchHHHHHhhhhcccCcccceEEEEECCCceEEEec--Cc--ceecCCc
Confidence            456679999999987764  346666 2111     10000111  111235568899999655444  45  4444322


Q ss_pred             C--Ce------EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccce-eEEe-ec
Q psy15191        209 S--GR------LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPE-VQKL-YG  278 (312)
Q Consensus       209 ~--~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~-~~  278 (312)
                      .  +.      ...+-..      .-..+..+-|.|+|.+.+.-+ | .++-+.-......       -|-. -..+ .+
T Consensus       114 Ptn~~q~W~g~a~~vG~~------gw~df~~lFFdP~G~LYaV~~-~-~l~k~~pP~~~~d-------~WL~~st~igr~  178 (235)
T d1tl2a_         114 PQSDTDNWIARATEVGSG------GWSGFKFLFFHPNGYLYAVHG-Q-QFYKALPPVSNQD-------NWLARATKIGQG  178 (235)
T ss_dssp             CCSTTCCHHHHSEEEECS------SGGGEEEEEECTTSCEEEEET-T-EEEEECCCSSTTC-------CHHHHCEEEESS
T ss_pred             CcccchhhhhhhhhhccC------CcCceeEEEECCCceEEEEEC-C-cEEEcCCCCCCCc-------hhhhhhhhhccC
Confidence            1  11      0111100      223466889999998777633 3 4666653332211       1211 1112 24


Q ss_pred             cCcceeEEEeccCCCeEEEE
Q psy15191        279 HGYEIYSLAASHDGTLLASA  298 (312)
Q Consensus       279 ~~~~v~~~~~s~~~~~l~s~  298 (312)
                      +-....-+.|+|+|.+...-
T Consensus       179 ~w~~~~fi~Fs~dG~L~~v~  198 (235)
T d1tl2a_         179 GWDTFKFLFFSSVGTLFGVQ  198 (235)
T ss_dssp             SGGGEEEEEECTTSCEEEEE
T ss_pred             cccCceEEEECCCCcEEEEe
Confidence            55566789999999877663

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=87.44  E-value=3.3  Score=28.78  Aligned_cols=133  Identities=14%  Similarity=0.147  Sum_probs=77.0

Q ss_pred             CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC------------------CCCCceEEEEeC-C
Q psy15191         48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD------------------DSKQLHLLSCSM-D  108 (312)
Q Consensus        48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------------------~~~~~~l~~~~~-d  108 (312)
                      -.|.++++..       .+..++|+......+|-++.++.....-.+.                  ..+..-++++.- .
T Consensus       104 vRI~S~~ydd-------k~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~S  176 (313)
T d2hu7a1         104 MRILSGVDTG-------EAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS  176 (313)
T ss_dssp             BEEEEEEECS-------SCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred             EEEEEeeecC-------ceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEeccc
Confidence            3456666533       4678899888889999999887632222211                  111112333333 5


Q ss_pred             CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCe---EEEecccCceeee-ec------ccC
Q psy15191        109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGS---LHLDVTTWKQIQT-LP------CHQ  177 (312)
Q Consensus       109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~---i~~d~~~~~~~~~-~~------~~~  177 (312)
                      |.+++++..                  .++++.....+..+. +++.. -|.   |.+|.++.+.... ++      -..
T Consensus       177 G~lri~tpk------------------eGS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p  237 (313)
T d2hu7a1         177 GGLRVFDSG------------------EGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRP  237 (313)
T ss_dssp             EEEEEECCS------------------SEEEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCC
T ss_pred             CCEEEecCC------------------CCcccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccceeecc
Confidence            566666544                  344555556665554 44332 122   3236665544332 11      123


Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKR  206 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~  206 (312)
                      -.|+-+-+.|++++++.+-.||.=++|.-
T Consensus       238 ~~I~~~~Y~Pdd~L~iiakrdG~s~lF~n  266 (313)
T d2hu7a1         238 TAITWLGYLPDGRLAVVARREGRSAVFID  266 (313)
T ss_dssp             SEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             eEEEeeeeCCCCcEEEEEecCCchheeec
Confidence            45677889999999899999999888863

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.79  E-value=4.6  Score=28.89  Aligned_cols=14  Identities=14%  Similarity=0.233  Sum_probs=10.2

Q ss_pred             cCCCeEEEEecCCC
Q psy15191        290 HDGTLLASACKATK  303 (312)
Q Consensus       290 ~~~~~l~s~s~d~~  303 (312)
                      .++++++.|+.++.
T Consensus       241 ~~~~l~v~GG~~~~  254 (288)
T d1zgka1         241 HQGRIYVLGGYDGH  254 (288)
T ss_dssp             ETTEEEEECCBCSS
T ss_pred             ECCEEEEEecCCCC
Confidence            46788888876554

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=85.18  E-value=8.5  Score=31.40  Aligned_cols=196  Identities=11%  Similarity=0.050  Sum_probs=104.7

Q ss_pred             EEEeccCCCceEEEEEeC-CCCceEEEEccccC----------c-EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC
Q psy15191         17 LYTLTNHKSKVMAVKWNG-EGGKVLYTLTNHKS----------K-VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS   84 (312)
Q Consensus        17 ~~~~~~h~~~v~~~~w~~-~~~~~~~~~~~h~~----------~-v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~   84 (312)
                      ++......+.|.++  +. ++|+.+.++.....          . -..+++.++.  .....+++.++.|+.|.-.|.++
T Consensus        65 ly~~t~~~~~v~a~--d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~--~~~~~~v~~~t~dg~l~Alda~t  140 (596)
T d1w6sa_          65 MYIHTSFPNNTFAL--GLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD--GKTPALILKTQLDGNVAALNAET  140 (596)
T ss_dssp             EEEECSTTTCEEEE--ETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC--SSSCCEEEEECTTSEEEEEETTT
T ss_pred             EEEeeCCCCcEEEE--eCCCCCCEEEEecCCCCcccccccccccccceeEEecCC--CCCceEEEEEeCCCCeEeecccc
Confidence            33333344555444  54 57888888752111          0 1234554430  01134677888888888888887


Q ss_pred             Cccccccc---------ccCCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecc----------------
Q psy15191         85 EGNYLPYH---------MRDDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGE----------------  131 (312)
Q Consensus        85 ~~~~~~~~---------~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~----------------  131 (312)
                      ++..-...         ....+  .+..++.+..      .|.|+-+|.++++..+........                
T Consensus       141 G~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~  220 (596)
T d1w6sa_         141 GETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (596)
T ss_dssp             CCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             CceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeeccCCccccccccccccccccc
Confidence            76521110         00011  1224555543      488999999998877653321100                


Q ss_pred             ---------------cCCCccceeEEEECCCCCeEEEeec-----------------CCeEEEecccCceeeeecc--cC
Q psy15191        132 ---------------VGGNTLGFYGCKFGPRGDYIIAHGF-----------------QGSLHLDVTTWKQIQTLPC--HQ  177 (312)
Q Consensus       132 ---------------~~~~~~~v~~~~~~~~~~~l~~~~~-----------------~~~i~~d~~~~~~~~~~~~--~~  177 (312)
                                     ..+....-..+++.+....++.+..                 +..+-+|.++++.+-.++.  |.
T Consensus       221 g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D  300 (596)
T d1w6sa_         221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (596)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccccccccccccccccceecc
Confidence                           0000111223456666666655432                 2234459999988876662  21


Q ss_pred             -------CceeEEEE-CCCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191        178 -------LTITQLAF-SPDD---THLVSVSRDRRWGLYKRQSSGRLSLVA  216 (312)
Q Consensus       178 -------~~v~~~~~-~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  216 (312)
                             ....-+.. ..+|   ..++....+|.+.++|..+++.+....
T Consensus       301 ~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~  350 (596)
T d1w6sa_         301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK  350 (596)
T ss_dssp             SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecc
Confidence                   11111221 2244   357778899999999999988775544

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=83.56  E-value=5.3  Score=27.72  Aligned_cols=80  Identities=16%  Similarity=0.187  Sum_probs=42.5

Q ss_pred             CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC--cccceeeEEEEE-cCCCceEEEecc-CCeEEEE
Q psy15191        178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN--GVHKRIIWGVAW-SHDSRYFLTISR-DGVCVVW  253 (312)
Q Consensus       178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~-~~~~~~l~s~~~-dg~i~iw  253 (312)
                      -+|.++++. +.+..++|+......+|-++.++.......+.-..  ......|..+.+ .++.+-+.++.- .|.++|+
T Consensus       104 vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~  182 (313)
T d2hu7a1         104 MRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF  182 (313)
T ss_dssp             BEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEE
T ss_pred             EEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEe
Confidence            567777775 56677788888888888888665544443321000  001222333322 333333444443 6666666


Q ss_pred             ecCCC
Q psy15191        254 GLGEP  258 (312)
Q Consensus       254 d~~~~  258 (312)
                      +-..+
T Consensus       183 tpkeG  187 (313)
T d2hu7a1         183 DSGEG  187 (313)
T ss_dssp             CCSSE
T ss_pred             cCCCC
Confidence            54443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.91  E-value=7.1  Score=28.69  Aligned_cols=196  Identities=17%  Similarity=0.189  Sum_probs=104.0

Q ss_pred             EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-c------------ccccccCCCC
Q psy15191         32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-Y------------LPYHMRDDSK   98 (312)
Q Consensus        32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-~------------~~~~~~~~~~   98 (312)
                      ||.++.+.+..+.-. .+|.--.|..+       +.|+-.. +..|.-|+++.... .            .+.-...+++
T Consensus        88 FnletK~klks~~~~-e~VvfWkWis~-------~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~  158 (327)
T d1utca2          88 FNIEMKSKMKAHTMT-DDVTFWKWISL-------NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK  158 (327)
T ss_dssp             EETTTTEEEEEEECS-SCCCEEEESSS-------SEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred             EehhHhhhhceEEcC-CCcEEEEecCC-------CEEEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCC
Confidence            888888888877754 46666677665       3555544 34799999854332 1            1111111233


Q ss_pred             CceEEEEe---C----CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC--CCC-eEEEe---ecCCeEEE-ec
Q psy15191         99 QLHLLSCS---M----DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP--RGD-YIIAH---GFQGSLHL-DV  164 (312)
Q Consensus        99 ~~~l~~~~---~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~-~l~~~---~~~~~i~~-d~  164 (312)
                      ...++..+   .    .|.+.+|..+....+.+        .+|......+.+.-  ... .++.+   ...+.+++ ++
T Consensus       159 ~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~i--------eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEi  230 (327)
T d1utca2         159 QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--------EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV  230 (327)
T ss_dssp             SCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE--------CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEEC
T ss_pred             CCEEEEEeEecCCCceeEEEEEEEeccCcCccc--------cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEc
Confidence            33332211   1    26677888776433222        24443333333221  111 22222   22356666 43


Q ss_pred             ccC---ceee-----ee--c--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191        165 TTW---KQIQ-----TL--P--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV  232 (312)
Q Consensus       165 ~~~---~~~~-----~~--~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~  232 (312)
                      ...   ....     .+  +  ...+-.-.|..++.-..++..+.-|.|++||+.++..+..-+.       ....|...
T Consensus       231 g~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRI-------s~~~iF~~  303 (327)
T d1utca2         231 GTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-------SGETIFVT  303 (327)
T ss_dssp             SCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEEEE
T ss_pred             CCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeec-------CCCceEEe
Confidence            321   1110     00  0  2234445678888778888899999999999999998877665       23334433


Q ss_pred             EEcCCCceEEEeccCCeEE
Q psy15191        233 AWSHDSRYFLTISRDGVCV  251 (312)
Q Consensus       233 ~~~~~~~~l~s~~~dg~i~  251 (312)
                      +-+.+..-+++...+|.|.
T Consensus       304 a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         304 APHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             EEETTTTEEEEEETTSEEE
T ss_pred             ccCCCCceEEEECCCCeEE
Confidence            4444434444445666543